Query 023512
Match_columns 281
No_of_seqs 168 out of 2631
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 08:06:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023512.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023512hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kh5_A Protein MJ1225; AMPK, A 100.0 3.3E-34 1.1E-38 241.2 18.9 225 1-265 30-279 (280)
2 3ddj_A CBS domain-containing p 100.0 7.8E-34 2.7E-38 241.2 15.6 226 1-269 46-287 (296)
3 2yzq_A Putative uncharacterize 100.0 3.6E-32 1.2E-36 229.1 17.6 221 1-267 27-279 (282)
4 3t4n_C Nuclear protein SNF4; C 100.0 6.9E-32 2.4E-36 231.9 18.5 230 1-266 58-319 (323)
5 2qrd_G Protein C1556.08C; AMPK 100.0 2.6E-30 8.9E-35 223.1 21.1 232 1-268 50-316 (334)
6 2v8q_E 5'-AMP-activated protei 100.0 7.7E-30 2.6E-34 219.8 19.9 235 1-267 63-323 (330)
7 3ddj_A CBS domain-containing p 99.9 8.1E-27 2.8E-31 197.9 16.2 201 33-266 12-213 (296)
8 3kh5_A Protein MJ1225; AMPK, A 99.9 1.6E-25 5.5E-30 188.1 17.7 197 44-268 7-206 (280)
9 2yzq_A Putative uncharacterize 99.9 1.2E-25 4E-30 189.2 13.7 178 41-263 1-180 (282)
10 3t4n_C Nuclear protein SNF4; C 99.9 4.7E-24 1.6E-28 183.0 19.3 207 39-268 28-249 (323)
11 2v8q_E 5'-AMP-activated protei 99.9 5.2E-24 1.8E-28 183.3 18.7 204 39-266 33-250 (330)
12 2qrd_G Protein C1556.08C; AMPK 99.9 2.2E-22 7.4E-27 173.4 20.1 207 40-266 21-242 (334)
13 4esy_A CBS domain containing m 99.9 5.1E-22 1.7E-26 154.8 8.9 146 38-200 15-161 (170)
14 3k6e_A CBS domain protein; str 99.9 2.8E-21 9.4E-26 148.4 12.4 124 142-267 15-142 (156)
15 4esy_A CBS domain containing m 99.8 2.5E-21 8.6E-26 150.8 9.2 128 138-268 14-163 (170)
16 3l2b_A Probable manganase-depe 99.8 2.7E-20 9.1E-25 153.5 14.6 218 40-267 6-244 (245)
17 3lv9_A Putative transporter; C 99.8 4.6E-20 1.6E-24 140.2 13.6 123 139-266 20-144 (148)
18 3hf7_A Uncharacterized CBS-dom 99.8 1.6E-20 5.5E-25 139.7 10.6 123 143-267 3-127 (130)
19 3lv9_A Putative transporter; C 99.8 1.3E-19 4.3E-24 137.8 14.6 137 20-201 4-145 (148)
20 3i8n_A Uncharacterized protein 99.8 3.7E-20 1.3E-24 137.6 11.1 123 140-266 4-128 (130)
21 2ef7_A Hypothetical protein ST 99.8 1.7E-19 5.8E-24 134.4 14.0 124 141-268 3-126 (133)
22 3lhh_A CBS domain protein; str 99.8 9.2E-20 3.1E-24 142.2 12.9 124 139-267 39-164 (172)
23 3kpb_A Uncharacterized protein 99.8 9.9E-20 3.4E-24 133.6 12.3 118 143-267 2-120 (122)
24 3gby_A Uncharacterized protein 99.8 7.7E-20 2.6E-24 135.5 11.5 123 141-267 4-126 (128)
25 2rc3_A CBS domain; in SITU pro 99.8 8.5E-20 2.9E-24 136.5 11.6 125 143-268 7-132 (135)
26 1pbj_A Hypothetical protein; s 99.8 1.2E-19 4.1E-24 133.7 12.1 121 143-267 2-122 (125)
27 3lfr_A Putative metal ION tran 99.8 4E-20 1.4E-24 138.6 9.0 124 142-268 3-128 (136)
28 3nqr_A Magnesium and cobalt ef 99.8 4.4E-20 1.5E-24 136.7 8.8 121 142-266 3-125 (127)
29 3ctu_A CBS domain protein; str 99.8 9E-20 3.1E-24 139.8 10.6 128 139-268 12-143 (156)
30 2yzi_A Hypothetical protein PH 99.8 2.8E-19 9.5E-24 134.1 13.1 125 140-268 5-130 (138)
31 2rih_A Conserved protein with 99.8 3.6E-19 1.2E-23 134.1 13.7 126 142-272 5-133 (141)
32 3fv6_A YQZB protein; CBS domai 99.8 4E-19 1.4E-23 136.7 13.9 130 134-267 9-144 (159)
33 3jtf_A Magnesium and cobalt ef 99.8 9.7E-20 3.3E-24 135.2 9.8 119 142-266 5-125 (129)
34 3lqn_A CBS domain protein; csg 99.8 1.4E-19 4.7E-24 137.8 10.7 128 139-268 12-144 (150)
35 3oco_A Hemolysin-like protein 99.8 2E-19 6.8E-24 137.5 11.3 124 140-268 18-144 (153)
36 3fhm_A Uncharacterized protein 99.8 1.7E-19 5.8E-24 139.7 10.9 130 138-268 20-151 (165)
37 2p9m_A Hypothetical protein MJ 99.8 4.8E-19 1.6E-23 132.8 12.9 125 139-267 5-136 (138)
38 1y5h_A Hypothetical protein RV 99.8 1.3E-19 4.3E-24 135.2 9.5 123 142-267 8-131 (133)
39 3k2v_A Putative D-arabinose 5- 99.8 3.1E-19 1.1E-23 135.8 11.9 121 142-264 28-149 (149)
40 3lhh_A CBS domain protein; str 99.8 9E-19 3.1E-23 136.5 14.1 142 16-202 19-165 (172)
41 4fry_A Putative signal-transdu 99.8 2.4E-19 8.3E-24 137.6 10.2 124 143-267 8-135 (157)
42 4gqw_A CBS domain-containing p 99.8 3.5E-19 1.2E-23 135.6 10.6 127 142-268 5-144 (152)
43 2o16_A Acetoin utilization pro 99.8 8E-19 2.8E-23 135.2 12.6 125 142-269 5-137 (160)
44 3ocm_A Putative membrane prote 99.8 7.3E-19 2.5E-23 137.1 12.4 123 139-267 33-157 (173)
45 1o50_A CBS domain-containing p 99.8 1.3E-18 4.4E-23 133.6 13.2 122 143-267 17-153 (157)
46 1pvm_A Conserved hypothetical 99.8 2.1E-18 7.2E-23 135.9 14.6 124 142-267 9-133 (184)
47 3i8n_A Uncharacterized protein 99.8 7.2E-19 2.5E-23 130.6 11.1 123 37-201 2-129 (130)
48 2nyc_A Nuclear protein SNF4; b 99.8 1E-18 3.5E-23 131.8 12.1 123 142-266 8-140 (144)
49 1pbj_A Hypothetical protein; s 99.8 2.1E-18 7.3E-23 126.9 13.4 121 41-200 1-121 (125)
50 2ef7_A Hypothetical protein ST 99.8 2.3E-18 7.9E-23 128.3 13.5 123 39-201 2-125 (133)
51 3oi8_A Uncharacterized protein 99.8 2.5E-19 8.5E-24 137.5 8.3 120 138-262 34-155 (156)
52 1vr9_A CBS domain protein/ACT 99.8 1.1E-18 3.9E-23 140.7 12.4 161 40-251 12-175 (213)
53 3gby_A Uncharacterized protein 99.8 1.7E-18 5.9E-23 128.2 12.1 121 39-199 3-124 (128)
54 3kpb_A Uncharacterized protein 99.8 2E-18 6.7E-23 126.6 12.3 116 41-199 1-118 (122)
55 3k6e_A CBS domain protein; str 99.8 1.5E-18 5E-23 133.1 12.0 125 40-201 14-142 (156)
56 2uv4_A 5'-AMP-activated protei 99.8 1.5E-18 5E-23 132.5 11.8 115 152-266 29-150 (152)
57 2emq_A Hypothetical conserved 99.8 2E-18 6.9E-23 132.3 12.4 127 139-268 8-140 (157)
58 3sl7_A CBS domain-containing p 99.8 3.2E-19 1.1E-23 139.8 8.1 126 143-268 5-157 (180)
59 3fhm_A Uncharacterized protein 99.8 3.9E-18 1.3E-22 132.0 14.0 130 34-201 17-150 (165)
60 3jtf_A Magnesium and cobalt ef 99.8 1.1E-18 3.8E-23 129.4 10.2 119 39-201 3-126 (129)
61 2o16_A Acetoin utilization pro 99.8 4.4E-18 1.5E-22 131.0 13.3 130 40-200 4-134 (160)
62 3ocm_A Putative membrane prote 99.8 5.8E-18 2E-22 132.0 13.8 142 16-203 13-159 (173)
63 3kxr_A Magnesium transporter, 99.8 7.8E-18 2.7E-22 134.8 14.6 120 139-267 51-174 (205)
64 3nqr_A Magnesium and cobalt ef 99.8 5.2E-19 1.8E-23 130.9 7.0 119 40-200 2-125 (127)
65 2rc3_A CBS domain; in SITU pro 99.8 9E-18 3.1E-22 125.4 13.9 121 42-200 7-130 (135)
66 3hf7_A Uncharacterized CBS-dom 99.8 3E-18 1E-22 127.3 10.9 121 41-201 2-127 (130)
67 1yav_A Hypothetical protein BS 99.8 2.3E-18 7.8E-23 132.4 10.2 129 139-269 11-144 (159)
68 1o50_A CBS domain-containing p 99.8 9E-18 3.1E-22 128.8 13.5 143 34-201 9-153 (157)
69 2rih_A Conserved protein with 99.8 1.2E-17 4.2E-22 125.6 13.1 117 40-197 4-124 (141)
70 4fry_A Putative signal-transdu 99.8 1.1E-17 3.6E-22 128.3 12.9 137 41-216 7-149 (157)
71 2yzi_A Hypothetical protein PH 99.8 3.3E-17 1.1E-21 122.7 15.0 125 37-201 3-129 (138)
72 3oco_A Hemolysin-like protein 99.8 5.7E-18 1.9E-22 129.4 10.8 123 37-202 16-144 (153)
73 2j9l_A Chloride channel protei 99.7 7.4E-18 2.5E-22 132.7 11.5 129 138-267 7-165 (185)
74 3lfr_A Putative metal ION tran 99.7 2.2E-18 7.4E-23 129.1 7.9 121 40-201 2-127 (136)
75 2p9m_A Hypothetical protein MJ 99.7 8.3E-18 2.8E-22 126.0 10.6 123 38-200 5-135 (138)
76 3fv6_A YQZB protein; CBS domai 99.7 3.1E-17 1.1E-21 126.0 14.0 126 38-201 14-144 (159)
77 3kxr_A Magnesium transporter, 99.7 2.5E-17 8.7E-22 131.8 13.2 124 33-201 46-174 (205)
78 4gqw_A CBS domain-containing p 99.7 8.2E-18 2.8E-22 128.0 9.8 133 40-201 4-143 (152)
79 2pfi_A Chloride channel protei 99.7 2.4E-17 8.2E-22 127.1 12.5 132 37-201 9-147 (164)
80 3lqn_A CBS domain protein; csg 99.7 1.6E-17 5.6E-22 126.3 11.1 128 38-201 12-143 (150)
81 3k2v_A Putative D-arabinose 5- 99.7 2E-17 6.8E-22 125.7 11.5 118 40-196 27-147 (149)
82 3oi8_A Uncharacterized protein 99.7 1.5E-18 5.2E-23 133.0 5.2 121 33-196 30-155 (156)
83 2pfi_A Chloride channel protei 99.7 2.4E-17 8.3E-22 127.1 11.6 125 140-267 11-147 (164)
84 1vr9_A CBS domain protein/ACT 99.7 5.2E-17 1.8E-21 130.9 13.2 118 141-267 12-130 (213)
85 2emq_A Hypothetical conserved 99.7 8.9E-17 3E-21 123.1 13.5 130 37-202 7-140 (157)
86 2d4z_A Chloride channel protei 99.7 1.3E-16 4.6E-21 130.9 15.4 160 37-199 9-244 (250)
87 2j9l_A Chloride channel protei 99.7 8E-17 2.8E-21 126.7 13.4 149 39-202 9-166 (185)
88 1y5h_A Hypothetical protein RV 99.7 1.6E-17 5.5E-22 123.6 8.7 120 40-197 7-127 (133)
89 3ctu_A CBS domain protein; str 99.7 5.8E-17 2E-21 124.1 11.5 128 38-202 12-143 (156)
90 2nyc_A Nuclear protein SNF4; b 99.7 9.9E-17 3.4E-21 120.8 12.6 127 39-201 6-141 (144)
91 3sl7_A CBS domain-containing p 99.7 3.6E-17 1.2E-21 128.1 10.3 150 40-201 3-156 (180)
92 1pvm_A Conserved hypothetical 99.7 1.1E-16 3.9E-21 125.9 13.1 123 35-196 4-128 (184)
93 1yav_A Hypothetical protein BS 99.7 8.5E-17 2.9E-21 123.5 11.1 129 37-201 10-142 (159)
94 2oux_A Magnesium transporter; 99.7 1.3E-16 4.4E-21 134.3 12.2 119 140-267 135-259 (286)
95 2yvy_A MGTE, Mg2+ transporter 99.7 2.5E-16 8.7E-21 132.0 13.7 120 140-268 133-258 (278)
96 2uv4_A 5'-AMP-activated protei 99.7 2.6E-16 8.8E-21 119.9 12.0 125 37-199 19-149 (152)
97 2d4z_A Chloride channel protei 99.7 3.2E-16 1.1E-20 128.7 11.8 125 140-267 11-246 (250)
98 2oux_A Magnesium transporter; 99.7 4.8E-16 1.6E-20 130.8 12.1 122 34-200 130-258 (286)
99 2yvy_A MGTE, Mg2+ transporter 99.7 1.1E-15 3.7E-20 128.2 13.1 121 35-200 129-256 (278)
100 3org_A CMCLC; transporter, tra 99.6 1.2E-16 4E-21 148.2 6.9 128 140-268 451-626 (632)
101 3pc3_A CG1753, isoform A; CBS, 99.6 8.5E-16 2.9E-20 139.8 11.4 123 141-268 383-512 (527)
102 2zy9_A Mg2+ transporter MGTE; 99.6 3.4E-15 1.2E-19 133.8 13.3 120 140-268 153-278 (473)
103 3pc3_A CG1753, isoform A; CBS, 99.6 6.3E-15 2.1E-19 134.1 12.2 124 38-202 381-512 (527)
104 2zy9_A Mg2+ transporter MGTE; 99.6 1.6E-14 5.6E-19 129.4 12.9 123 34-201 148-277 (473)
105 3usb_A Inosine-5'-monophosphat 99.6 2.1E-14 7.1E-19 129.5 13.0 115 145-267 116-234 (511)
106 3org_A CMCLC; transporter, tra 99.6 2.4E-15 8.2E-20 139.5 6.7 146 39-196 451-620 (632)
107 3usb_A Inosine-5'-monophosphat 99.6 4.2E-14 1.4E-18 127.5 14.1 160 42-250 114-279 (511)
108 4fxs_A Inosine-5'-monophosphat 99.5 5E-15 1.7E-19 133.1 6.2 117 144-268 91-210 (496)
109 1me8_A Inosine-5'-monophosphat 99.5 1.7E-15 5.9E-20 136.6 -0.1 167 43-255 98-270 (503)
110 1zfj_A Inosine monophosphate d 99.5 3E-13 1E-17 122.1 14.1 115 145-267 93-211 (491)
111 3l2b_A Probable manganase-depe 99.5 4.9E-14 1.7E-18 115.9 7.7 56 40-95 184-241 (245)
112 4avf_A Inosine-5'-monophosphat 99.5 3E-15 1E-19 134.4 0.4 117 144-268 90-208 (490)
113 4fxs_A Inosine-5'-monophosphat 99.5 5.8E-14 2E-18 126.2 8.7 114 42-197 90-205 (496)
114 1me8_A Inosine-5'-monophosphat 99.5 4.2E-15 1.4E-19 134.1 0.1 112 148-266 103-220 (503)
115 4af0_A Inosine-5'-monophosphat 99.5 4.9E-15 1.7E-19 130.6 0.1 110 152-268 146-259 (556)
116 1vrd_A Inosine-5'-monophosphat 99.5 7.6E-15 2.6E-19 132.6 0.5 117 144-268 97-216 (494)
117 3ghd_A A cystathionine beta-sy 99.4 3.6E-13 1.2E-17 88.1 8.0 69 154-222 2-70 (70)
118 4avf_A Inosine-5'-monophosphat 99.4 5.9E-14 2E-18 126.0 5.6 156 42-245 89-247 (490)
119 1zfj_A Inosine monophosphate d 99.4 3E-12 1E-16 115.6 16.4 115 42-200 91-210 (491)
120 1vrd_A Inosine-5'-monophosphat 99.4 1.5E-13 5E-18 124.2 4.5 156 42-245 96-255 (494)
121 1jcn_A Inosine monophosphate d 99.3 2.9E-14 9.8E-19 129.3 -2.9 120 143-268 109-234 (514)
122 2cu0_A Inosine-5'-monophosphat 99.3 1.6E-13 5.5E-18 123.5 0.3 112 145-266 96-207 (486)
123 4af0_A Inosine-5'-monophosphat 99.3 6E-13 2.1E-17 117.4 2.1 164 44-255 141-309 (556)
124 2cu0_A Inosine-5'-monophosphat 99.3 5.4E-13 1.9E-17 120.1 1.5 163 43-257 95-258 (486)
125 1jcn_A Inosine monophosphate d 99.2 1.1E-12 3.7E-17 119.0 -0.0 157 42-245 109-273 (514)
126 3fio_A A cystathionine beta-sy 99.1 1.7E-10 5.8E-15 75.3 8.0 69 153-221 1-69 (70)
127 3ghd_A A cystathionine beta-sy 99.1 2.9E-11 9.9E-16 78.9 2.4 53 1-54 18-70 (70)
128 3fio_A A cystathionine beta-sy 98.6 7.2E-08 2.4E-12 62.5 6.5 47 219-266 2-48 (70)
129 1tif_A IF3-N, translation init 72.3 6.4 0.00022 25.3 4.4 28 239-266 12-39 (78)
130 1tif_A IF3-N, translation init 68.0 14 0.00047 23.7 5.2 35 5-39 12-46 (78)
131 1svj_A Potassium-transporting 44.7 14 0.00047 27.2 2.6 35 228-263 121-155 (156)
132 1p0z_A Sensor kinase CITA; tra 38.8 23 0.00078 24.7 3.0 26 162-187 36-63 (131)
133 3by8_A Sensor protein DCUS; hi 37.5 24 0.00081 25.1 2.9 88 161-263 41-131 (142)
134 1svj_A Potassium-transporting 31.5 37 0.0013 24.8 3.1 34 59-92 120-153 (156)
135 3fan_A Non-structural protein; 30.2 28 0.00097 26.9 2.3 25 238-262 124-148 (213)
136 2w5e_A Putative serine proteas 27.6 37 0.0013 25.0 2.6 23 236-258 122-144 (163)
137 3tjo_A Serine protease HTRA1; 26.2 38 0.0013 26.4 2.6 21 239-259 187-207 (231)
138 3fld_A Protein TRAI, DNA helic 25.1 54 0.0019 23.6 2.9 70 7-78 52-131 (153)
139 3lgi_A Protease DEGS; stress-s 23.7 40 0.0014 26.3 2.3 22 237-258 172-193 (237)
140 3sti_A Protease DEGQ; serine p 22.6 49 0.0017 26.2 2.6 21 238-258 184-204 (245)
141 3k6y_A Serine protease, possib 22.3 50 0.0017 25.7 2.6 22 238-259 180-201 (237)
142 3ksh_A Putative uncharacterize 22.0 67 0.0023 23.5 3.0 18 72-89 115-132 (160)
143 2qkp_A Uncharacterized protein 21.3 64 0.0022 23.1 2.8 20 242-261 110-130 (151)
144 2as9_A Serine protease; trypsi 21.3 48 0.0016 25.2 2.2 22 238-259 155-176 (210)
145 3rfb_A Putative uncharacterize 21.1 71 0.0024 23.7 3.0 19 72-90 116-134 (171)
146 3r8s_H 50S ribosomal protein L 20.4 1E+02 0.0035 22.3 3.7 29 14-42 86-114 (149)
147 2w7s_A Serine protease SPLA; h 20.0 61 0.0021 24.2 2.6 22 238-259 151-172 (200)
No 1
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=100.00 E-value=3.3e-34 Score=241.23 Aligned_cols=225 Identities=18% Similarity=0.237 Sum_probs=189.0
Q ss_pred CCCCCccEEEEEcC-CCcEEEEEehHHHHHHHHHh-------cC------CCCcccccccccCCCeEecCCchHHHHHHH
Q 023512 1 MAARRVDALLLTDS-NALLCGILTDKDIATRVIAR-------EL------NLEETPVSKVMTRNPTFVLSDTLAVEALQK 66 (281)
Q Consensus 1 m~~~~~~~~~v~~~-~~~~~Gi~t~~d~~~~~~~~-------~~------~~~~~~v~dim~~~~~~v~~~~~l~~a~~~ 66 (281)
|.+++++++||+|+ +++++|++|.+|+++.+... .. ...+.+++++|.++++++++++++.+|++.
T Consensus 30 m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~ 109 (280)
T 3kh5_A 30 MNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPVREIMEENVITLKENADIDEAIET 109 (280)
T ss_dssp HHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTTSBGGGTSBCSCCCEETTCBHHHHHHH
T ss_pred HHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhhhhHHHhcCCCCEEECCCCCHHHHHHH
Confidence 56789999999997 78999999999998644110 00 112568999999999999999999999999
Q ss_pred hHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCcc
Q 023512 67 MVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLS 145 (281)
Q Consensus 67 m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 145 (281)
|.+++++++||+|+ |+++|+++..|+++..... .....++.
T Consensus 110 ~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~--------------------------------------~~~~~~v~ 151 (280)
T 3kh5_A 110 FLTKNVGGAPIVNDENQLISLITERDVIRALLDK--------------------------------------IDENEVID 151 (280)
T ss_dssp HHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGG--------------------------------------SCTTCBSG
T ss_pred HHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhc--------------------------------------CCCCCCHH
Confidence 99999999999985 9999999999987642110 11223688
Q ss_pred ccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHHHHhcC----------CCCccccccccc
Q 023512 146 TIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQN----------LPADSTLVEKVM 215 (281)
Q Consensus 146 ~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~~~~~~----------~~~~~~~v~~~~ 215 (281)
++|. +++.++++++++.++++.|.+++++++||+++|+++|++|.+|+++.+.... ......++.++|
T Consensus 152 ~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m 229 (280)
T 3kh5_A 152 DYIT--RDVIVATPGERLKDVARTMVRNGFRRLPVVSEGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRMEEIM 229 (280)
T ss_dssp GGCB--CSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBHHHHS
T ss_pred HHhC--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcHHHHh
Confidence 8887 7789999999999999999999999999999999999999999985443211 001245789999
Q ss_pred cCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhh
Q 023512 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (281)
Q Consensus 216 ~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~ 265 (281)
+++++++++++++.+|++.|.+++++++||+|++|+++|+||.+||+++.
T Consensus 230 ~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 230 KRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKYF 279 (280)
T ss_dssp BSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGGG
T ss_pred cCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHhh
Confidence 99999999999999999999999999999999889999999999999875
No 2
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=100.00 E-value=7.8e-34 Score=241.17 Aligned_cols=226 Identities=19% Similarity=0.199 Sum_probs=191.5
Q ss_pred CCCCCccEEEEEcCCCcEEEEEehHHHHHHHHHhc---------CCCCcccccccccCCCeEecCCchHHHHHHHhHhCC
Q 023512 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARE---------LNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGK 71 (281)
Q Consensus 1 m~~~~~~~~~v~~~~~~~~Gi~t~~d~~~~~~~~~---------~~~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~ 71 (281)
|.+++++++||++ ++++|++|.+|+++.+.... ....+.+++++|+++++++.+++++.+|+++|.+++
T Consensus 46 m~~~~~~~~~V~d--~~l~GivT~~Di~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~ 123 (296)
T 3ddj_A 46 INEGGIGRIIVAN--EKIEGLLTTRDLLSTVESYCKDSCSQGDLYHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRN 123 (296)
T ss_dssp TTGGGCCEEEEES--SSEEEEEEHHHHHGGGTTCC---CCHHHHHHHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHT
T ss_pred HHHCCCceEEEEC--CeEEEEEeHHHHHHHhcccccccccchhhHHHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcC
Confidence 7889999999999 89999999999986542111 123367899999999999999999999999999999
Q ss_pred CcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccC
Q 023512 72 FRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPE 150 (281)
Q Consensus 72 ~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~ 150 (281)
++++||+|+ ++++|+++..|++.... ......++.++|.
T Consensus 124 ~~~lpVvd~~~~lvGivt~~dl~~~~~---------------------------------------~~~~~~~v~~~m~- 163 (296)
T 3ddj_A 124 FGSLPVVDINDKPVGIVTEREFLLLYK---------------------------------------DLDEIFPVKVFMS- 163 (296)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHGGGGG---------------------------------------GSCCCCBHHHHSB-
T ss_pred CCEEEEEcCCCcEEEEEeHHHHHHhhh---------------------------------------cccccccHHHhhc-
Confidence 999999985 89999999999875310 0112336778886
Q ss_pred CCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCC-----CCccccccccccCCCeeeeC
Q 023512 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-----PADSTLVEKVMTPNPECATI 224 (281)
Q Consensus 151 ~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~-----~~~~~~v~~~~~~~~~~v~~ 224 (281)
+++.++++++++.++++.|.+++++++||++ +|+++|++|..|+++.+..... .....++.++|+++++++.+
T Consensus 164 -~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~ 242 (296)
T 3ddj_A 164 -TKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVMVTNLVTIDE 242 (296)
T ss_dssp -CSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHSBCCCCBCCT
T ss_pred -CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHhCCCCeEECC
Confidence 7789999999999999999999999999999 8999999999999855442110 01245899999999999999
Q ss_pred CCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhchH
Q 023512 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269 (281)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~~ 269 (281)
++++.++++.|.+++.+++||+|++|+++|+||.+||+++.....
T Consensus 243 ~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~~ 287 (296)
T 3ddj_A 243 LASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHIL 287 (296)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999977653
No 3
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=100.00 E-value=3.6e-32 Score=229.15 Aligned_cols=221 Identities=19% Similarity=0.249 Sum_probs=176.0
Q ss_pred CCCCCccEEEEEcCCCcEEEEEehHHHHHHHHHhcCCCCcccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC
Q 023512 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN 80 (281)
Q Consensus 1 m~~~~~~~~~v~~~~~~~~Gi~t~~d~~~~~~~~~~~~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~ 80 (281)
|.+++++++||+|++|+++|++|.+|+++.+ .+.+++++|.+++.++++++++.+|++.|.+++++.+||+|+
T Consensus 27 ~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~~-------~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~ 99 (282)
T 2yzq_A 27 FKKYKVRSFPVVNKEGKLVGIISVKRILVNP-------DEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS 99 (282)
T ss_dssp -----CCEEEEECTTCCEEEEEESSCC-----------------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHcCCCeEEEEcCCCcEEEEEEHHHHHhhh-------ccCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 5678999999999889999999999997432 367899999999999999999999999999999999999996
Q ss_pred -CeEEEEEehHHHHH-HHHHHHHHHHHhhhhHHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeC
Q 023512 81 -GEVIALLDIAKCLY-DAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTIS 158 (281)
Q Consensus 81 -~~~vGvi~~~dll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~ 158 (281)
|+++|+++..|+++ ..... ......++.++|. .++.+++
T Consensus 100 ~~~~~Giit~~di~~~~~~~~-------------------------------------~~~~~~~v~~~m~--~~~~~v~ 140 (282)
T 2yzq_A 100 KGKPVGILTVGDIIRRYFAKS-------------------------------------EKYKGVEIEPYYQ--RYVSIVW 140 (282)
T ss_dssp TSCEEEEEEHHHHHHHTTTTC-------------------------------------SGGGGCBSTTTSB--SCCCCEE
T ss_pred CCEEEEEEEHHHHHHHHHhcc-------------------------------------CCcccCcHHHHhC--CCCEEEC
Confidence 89999999999976 31100 0011335778886 7789999
Q ss_pred CCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHH------HHHH------hc-----------------CCCCcc
Q 023512 159 PTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL------MRVI------SQ-----------------NLPADS 208 (281)
Q Consensus 159 ~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~------~~~~------~~-----------------~~~~~~ 208 (281)
+++++.++++.|.+++++++||++ +|+++|++|..|++ +.+. .. ......
T Consensus 141 ~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (282)
T 2yzq_A 141 EGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPN 220 (282)
T ss_dssp TTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC--------------------------------CC
T ss_pred CCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhcc
Confidence 999999999999999999999998 88999999999997 3221 00 011234
Q ss_pred ccccccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 209 ~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
.+++++|++++.++.+++++.+|++.|.+++++++||+|++|+++|+||.+||+++...
T Consensus 221 ~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 221 KPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp CBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGGCC
T ss_pred CCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHHHh
Confidence 68999999999999999999999999999999999999977899999999999998664
No 4
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=100.00 E-value=6.9e-32 Score=231.93 Aligned_cols=230 Identities=15% Similarity=0.172 Sum_probs=182.8
Q ss_pred CCCCCccEEEEEcCC-CcEEEEEehHHHHHHHHH---hcC------CCCccccc------ccccCCCeEecCCchHHHHH
Q 023512 1 MAARRVDALLLTDSN-ALLCGILTDKDIATRVIA---REL------NLEETPVS------KVMTRNPTFVLSDTLAVEAL 64 (281)
Q Consensus 1 m~~~~~~~~~v~~~~-~~~~Gi~t~~d~~~~~~~---~~~------~~~~~~v~------dim~~~~~~v~~~~~l~~a~ 64 (281)
|.++++.++||+|++ ++++|++|.+|++..+.. ... ......+. ++|.++++++++++++.+|+
T Consensus 58 m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~ 137 (323)
T 3t4n_C 58 LLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEAC 137 (323)
T ss_dssp HHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHH
T ss_pred HHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHH
Confidence 567899999999975 499999999999865431 111 11112233 44578999999999999999
Q ss_pred HHhHhCCCcEeeEeeC-Ce-----EEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhhhhCCCCCChhhHHHHHHHh
Q 023512 65 QKMVQGKFRHLPVVEN-GE-----VIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRER 138 (281)
Q Consensus 65 ~~m~~~~~~~~pV~d~-~~-----~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (281)
+.|.+++++++||+++ +. ++|+++..|++......... ..
T Consensus 138 ~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~----------------------------------~~ 183 (323)
T 3t4n_C 138 LKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE----------------------------------TH 183 (323)
T ss_dssp HHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG----------------------------------GG
T ss_pred HHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc----------------------------------hh
Confidence 9999999999999985 43 99999999998764322110 11
Q ss_pred hcCCCcccc---ccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCcccccccc
Q 023512 139 MFRPSLSTI---IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKV 214 (281)
Q Consensus 139 ~~~~~v~~~---m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~ 214 (281)
....++.++ |. +++.++++++++.++++.|.+++++++||++ +|+++|+||.+|+++.+..........++.++
T Consensus 184 ~~~~~v~~~~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~ 261 (323)
T 3t4n_C 184 FLKIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEA 261 (323)
T ss_dssp GCCSBGGGTTCSBC--TTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHHHHTTSBHHHH
T ss_pred hhhCcHHHcCCCCC--CCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchhhhccCCHHHH
Confidence 233467777 65 7899999999999999999999999999999 89999999999998544432212234589999
Q ss_pred ccC------CCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhh
Q 023512 215 MTP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (281)
Q Consensus 215 ~~~------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~ 266 (281)
|++ +++++.+++++.++++.|.+++++++||+|++|+++|+||.+||+++..
T Consensus 262 m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~ 319 (323)
T 3t4n_C 262 LMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 319 (323)
T ss_dssp GGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHH
Confidence 987 7899999999999999999999999999998999999999999999864
No 5
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.97 E-value=2.6e-30 Score=223.08 Aligned_cols=232 Identities=15% Similarity=0.179 Sum_probs=184.5
Q ss_pred CCCCCccEEEEEcCC-CcEEEEEehHHHHHHHHHh------cC---CCCcccccc-------cccCCC--eEecCCchHH
Q 023512 1 MAARRVDALLLTDSN-ALLCGILTDKDIATRVIAR------EL---NLEETPVSK-------VMTRNP--TFVLSDTLAV 61 (281)
Q Consensus 1 m~~~~~~~~~v~~~~-~~~~Gi~t~~d~~~~~~~~------~~---~~~~~~v~d-------im~~~~--~~v~~~~~l~ 61 (281)
|.+++++++||++++ ++++|++|.+|++..+... .. .+...++++ +|.+++ +++.+++++.
T Consensus 50 ~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~ 129 (334)
T 2qrd_G 50 LTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLM 129 (334)
T ss_dssp HHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHH
T ss_pred HHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHH
Confidence 456789999999975 7999999999998654321 11 111334443 366677 9999999999
Q ss_pred HHHHHhHhCCCcEeeEeeC-C-e----EEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhhhhCCCCCChhhHHHHH
Q 023512 62 EALQKMVQGKFRHLPVVEN-G-E----VIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETL 135 (281)
Q Consensus 62 ~a~~~m~~~~~~~~pV~d~-~-~----~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (281)
+|++.|.+++++++||+++ + + ++|+++..|++.........
T Consensus 130 ~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~--------------------------------- 176 (334)
T 2qrd_G 130 DACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKE--------------------------------- 176 (334)
T ss_dssp HHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGG---------------------------------
T ss_pred HHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccc---------------------------------
Confidence 9999999999999999985 3 4 99999999998764321000
Q ss_pred HHhhcCCCccc---cccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccc
Q 023512 136 RERMFRPSLST---IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLV 211 (281)
Q Consensus 136 ~~~~~~~~v~~---~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v 211 (281)
......++.+ +|. +++.++++++++.++++.|.+++.+++||++ +|+++|+||.+|+++.+..........++
T Consensus 177 -~~~~~~~v~~l~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v 253 (334)
T 2qrd_G 177 -TAMLRVPLNQMTIGTW--SNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGDYSNLDLSV 253 (334)
T ss_dssp -GGGCCCBGGGSSCSBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSCGGGGGSBH
T ss_pred -hhhhhCcHHHhCCccc--CCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhccccccccCcH
Confidence 0112345666 466 7789999999999999999999999999999 78999999999998544433222335688
Q ss_pred cccccC------CCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 212 EKVMTP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 212 ~~~~~~------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
.++|.+ +++++.+++++.++++.|.+++.+++||+|++|+++|+||..||+++....
T Consensus 254 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~ 316 (334)
T 2qrd_G 254 GEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYD 316 (334)
T ss_dssp HHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSC
T ss_pred HHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhc
Confidence 999984 899999999999999999999999999999889999999999999986544
No 6
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.97 E-value=7.7e-30 Score=219.80 Aligned_cols=235 Identities=17% Similarity=0.199 Sum_probs=182.9
Q ss_pred CCCCCccEEEEEcCC-CcEEEEEehHHHHHHHHHhc-------CCCCcccc-------cccccCCCeEecCCchHHHHHH
Q 023512 1 MAARRVDALLLTDSN-ALLCGILTDKDIATRVIARE-------LNLEETPV-------SKVMTRNPTFVLSDTLAVEALQ 65 (281)
Q Consensus 1 m~~~~~~~~~v~~~~-~~~~Gi~t~~d~~~~~~~~~-------~~~~~~~v-------~dim~~~~~~v~~~~~l~~a~~ 65 (281)
|.+++++++||++++ ++++|++|.+|+++.+.... ..+.+.++ .++|.++++++++++++.+|++
T Consensus 63 ~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~ 142 (330)
T 2v8q_E 63 LVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVS 142 (330)
T ss_dssp HHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHH
T ss_pred HHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHH
Confidence 456789999999986 68999999999986553211 11222233 4678999999999999999999
Q ss_pred HhHhCCCcEeeEee--CCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCC
Q 023512 66 KMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPS 143 (281)
Q Consensus 66 ~m~~~~~~~~pV~d--~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (281)
+|.+++++.+||+| +|+++|+++..|++++....... .+... ....+
T Consensus 143 ~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~-----------------------~~~~~--------~~~~~ 191 (330)
T 2v8q_E 143 SLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITE-----------------------FPKPE--------FMSKS 191 (330)
T ss_dssp HHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCS-----------------------SSCCG--------GGGSB
T ss_pred HHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhc-----------------------cCchh--------hhcCC
Confidence 99999999999998 58999999999998753221000 00000 00112
Q ss_pred cccc--ccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccccc-----
Q 023512 144 LSTI--IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVM----- 215 (281)
Q Consensus 144 v~~~--m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~----- 215 (281)
+.++ |. ..++.++++++++.++++.|.+++.+++||++ +|+++|+||.+|+++.+..........++.++|
T Consensus 192 v~~~~v~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (330)
T 2v8q_E 192 LEELQIGT-YANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSH 270 (330)
T ss_dssp HHHHTCSB-CSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGGCCS
T ss_pred HHHhcccC-cCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccccccccCcHHHHHhcccc
Confidence 2232 22 15688899999999999999999999999999 899999999999984443332222345788888
Q ss_pred -cCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 216 -TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 216 -~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
.++++++++++++.++++.|.+++.+++||+|++|+++|+||..||+++...
T Consensus 271 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 271 YFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp CCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHS
T ss_pred ccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHh
Confidence 4789999999999999999999999999999988999999999999998654
No 7
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.95 E-value=8.1e-27 Score=197.88 Aligned_cols=201 Identities=19% Similarity=0.269 Sum_probs=167.3
Q ss_pred HhcCCCCcccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHH
Q 023512 33 ARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112 (281)
Q Consensus 33 ~~~~~~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~ 112 (281)
..+.+....+|+|+|+++++++++++|+.+|++.|.+++++++||++ ++++|++|..|++.........
T Consensus 12 ~~~~~~~~~~V~dim~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-~~l~GivT~~Di~~~~~~~~~~---------- 80 (296)
T 3ddj_A 12 HENLYFQGMNIETLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN-EKIEGLLTTRDLLSTVESYCKD---------- 80 (296)
T ss_dssp --CCTTCCSSGGGTCEESCCEECTTSBHHHHHHHTTGGGCCEEEEES-SSEEEEEEHHHHHGGGTTCC------------
T ss_pred hhhhhhcccCHHHhccCCCcEECCCccHHHHHHHHHHCCCceEEEEC-CeEEEEEeHHHHHHHhcccccc----------
Confidence 34567778999999999999999999999999999999999999999 9999999999998643110000
Q ss_pred HHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeee
Q 023512 113 AVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILT 191 (281)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt 191 (281)
..+...+. .....++.++|. +++.++.+++++.++++.|.+++++++||++ +|+++|++|
T Consensus 81 ----------------~~~~~~~~-~~~~~~v~~im~--~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt 141 (296)
T 3ddj_A 81 ----------------SCSQGDLY-HISTTPIIDYMT--PNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVT 141 (296)
T ss_dssp -----------------CCHHHHH-HHHTSBGGGTSE--ESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEE
T ss_pred ----------------cccchhhH-HHhcccHHHhcc--CCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEe
Confidence 00111111 122456899998 6788999999999999999999999999998 889999999
Q ss_pred HHHHHHHHHhcCCCCccccccccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhh
Q 023512 192 SKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (281)
Q Consensus 192 ~~di~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~ 266 (281)
.+|++ ..+.... ...++.++|.++++++++++++.++++.|.+++.+++||+|++|+++|+||..|++++..
T Consensus 142 ~~dl~-~~~~~~~--~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 142 EREFL-LLYKDLD--EIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp HHHHG-GGGGGSC--CCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred HHHHH-Hhhhccc--ccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 99997 4333222 234899999999999999999999999999999999999999999999999999998865
No 8
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.94 E-value=1.6e-25 Score=188.09 Aligned_cols=197 Identities=18% Similarity=0.277 Sum_probs=158.6
Q ss_pred cccccCCCeEecCCchHHHHHHHhHhCCCcEeeEee--CCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhhhh
Q 023512 44 SKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHW 121 (281)
Q Consensus 44 ~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d--~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (281)
+.+|+++++++++++|+.+|+++|.+++++++||++ +++++|++|..|++........ .. .....
T Consensus 7 ~~i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~--------~~-~~~~~---- 73 (280)
T 3kh5_A 7 KIAQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSK--------YN-LIREK---- 73 (280)
T ss_dssp GTSCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGG--------GH-HHHTT----
T ss_pred HHhcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccch--------hh-hhhhc----
Confidence 446778999999999999999999999999999998 4999999999999875311000 00 00000
Q ss_pred CCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHH
Q 023512 122 GTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVI 200 (281)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~ 200 (281)
.... +. .....++.++|. +++.++++++++.++++.|.+++++++||++ +|+++|++|.+|+++.+.
T Consensus 74 -----~~~~----~~-~~~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 141 (280)
T 3kh5_A 74 -----HERN----FL-AAINEPVREIME--ENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALL 141 (280)
T ss_dssp -----STTC----HH-HHTTSBGGGTSB--CSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHG
T ss_pred -----cccc----hh-HHhhhhHHHhcC--CCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHh
Confidence 0000 00 112457899998 6899999999999999999999999999998 899999999999984444
Q ss_pred hcCCCCccccccccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 201 ~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
.. .. ...++.++|.+++.++++++++.++++.|.+++.+++||+ ++|+++|+||.+|++++....
T Consensus 142 ~~-~~-~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~ 206 (280)
T 3kh5_A 142 DK-ID-ENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSD 206 (280)
T ss_dssp GG-SC-TTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSH
T ss_pred hc-CC-CCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhh
Confidence 33 22 2347899999999999999999999999999999999999 589999999999999987654
No 9
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.93 E-value=1.2e-25 Score=189.24 Aligned_cols=178 Identities=27% Similarity=0.383 Sum_probs=139.5
Q ss_pred ccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhh
Q 023512 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (281)
Q Consensus 41 ~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d-~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (281)
++++++|+++++++++++++.+|+++|.+++++++||++ +|+++|+++..|++...
T Consensus 1 m~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~~----------------------- 57 (282)
T 2yzq_A 1 MRVKTIMTQNPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRILVNP----------------------- 57 (282)
T ss_dssp CBHHHHSEESCCCEESSCC------------CCEEEEECTTCCEEEEEESSCC---------------------------
T ss_pred CchHHhccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCCCcEEEEEEHHHHHhhh-----------------------
Confidence 478999999999999999999999999999999999999 59999999999987431
Q ss_pred hhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHH
Q 023512 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR 198 (281)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~ 198 (281)
...++.++|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|..|++++
T Consensus 58 --------------------~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~ 115 (282)
T 2yzq_A 58 --------------------DEEQLAMLVK--RDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRR 115 (282)
T ss_dssp --------------------------CCCB--SCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred --------------------ccCCHHHHcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHH
Confidence 1134777886 5688999999999999999999999999999 7899999999999841
Q ss_pred HHhcCCCCccccccccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHH
Q 023512 199 VISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263 (281)
Q Consensus 199 ~~~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~ 263 (281)
.+.........++.++|.++++++++++++.++++.|.+++.+++||+|++|+++|++|..|++.
T Consensus 116 ~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~ 180 (282)
T 2yzq_A 116 YFAKSEKYKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLR 180 (282)
T ss_dssp TTTTCSGGGGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGG
T ss_pred HHhccCCcccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhh
Confidence 44432222345789999999999999999999999999999999999998899999999999993
No 10
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.92 E-value=4.7e-24 Score=183.04 Aligned_cols=207 Identities=15% Similarity=0.224 Sum_probs=158.4
Q ss_pred CcccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHH
Q 023512 39 EETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (281)
Q Consensus 39 ~~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~--~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (281)
.+.++.|+|.+ ++++++.++|+.+|++.|.+++++++||+++ ++++|+++..|++......... ..... .+
T Consensus 28 ~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~----~~~~~-~l 102 (323)
T 3t4n_C 28 NSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSN----PDKFE-LV 102 (323)
T ss_dssp HHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHC----GGGGG-GG
T ss_pred HhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcC----cchhH-HH
Confidence 57799999985 6789999999999999999999999999995 5999999999998765432211 00000 00
Q ss_pred hhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCe-----eeE
Q 023512 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENK-----PRG 188 (281)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~-----~~G 188 (281)
. ......+.+.+ ....+|. .++.++++++++.++++.|.+++++++||++ ++. ++|
T Consensus 103 ~-------------~~~~~~v~~i~---~~~~~~~--~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~G 164 (323)
T 3t4n_C 103 D-------------KLQLDGLKDIE---RALGVDQ--LDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVS 164 (323)
T ss_dssp G-------------GCBHHHHHHHH---HHTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEE
T ss_pred H-------------HHHHHHHHHHH---HHhCCCC--CCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEE
Confidence 0 00001111111 1233444 7789999999999999999999999999999 554 999
Q ss_pred eeeHHHHHHHHHhcC--CCCcccccccc---ccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHH
Q 023512 189 ILTSKDILMRVISQN--LPADSTLVEKV---MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263 (281)
Q Consensus 189 ivt~~di~~~~~~~~--~~~~~~~v~~~---~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~ 263 (281)
++|.+|+++.+.... ......++.++ |.++++++.+++++.++++.|.+++.+++||+|++|+++|+||.+|+++
T Consensus 165 ivt~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~ 244 (323)
T 3t4n_C 165 VLTQYRILKFVALNCRETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLG 244 (323)
T ss_dssp EEEHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHH
T ss_pred EecHHHHHHHHHhcCCchhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHH
Confidence 999999986554322 11224578899 8899999999999999999999999999999998999999999999999
Q ss_pred hhhch
Q 023512 264 AAVAT 268 (281)
Q Consensus 264 ~~~~~ 268 (281)
+....
T Consensus 245 ~~~~~ 249 (323)
T 3t4n_C 245 LIKGG 249 (323)
T ss_dssp HHHTT
T ss_pred HHhhc
Confidence 86554
No 11
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.92 E-value=5.2e-24 Score=183.31 Aligned_cols=204 Identities=21% Similarity=0.201 Sum_probs=158.0
Q ss_pred Ccccccccc--cCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHH
Q 023512 39 EETPVSKVM--TRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (281)
Q Consensus 39 ~~~~v~dim--~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~--~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (281)
.+.+++|+| +++++++++++++.+|++.|.+++++++||+++ ++++|+++..|++................+
T Consensus 33 ~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l---- 108 (330)
T 2v8q_E 33 KSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYEL---- 108 (330)
T ss_dssp HHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCG----
T ss_pred HcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHH----
Confidence 366999999 778999999999999999999999999999985 689999999999876543221110000000
Q ss_pred hhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe--CCeeeEeeeH
Q 023512 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV--ENKPRGILTS 192 (281)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~--~~~~~Givt~ 192 (281)
. ......+.. .+.++|. +++.++++++++.++++.|.+++++++||++ +|+++|++|.
T Consensus 109 ------------~-~~~~~~~~~-----~~~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~ 168 (330)
T 2v8q_E 109 ------------E-EHKIETWRE-----VYLQDSF--KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTH 168 (330)
T ss_dssp ------------G-GCBHHHHHH-----HHSSSSC--CCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECH
T ss_pred ------------h-hccHHHHHH-----HHhhccc--CCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcH
Confidence 0 000111111 2446676 7799999999999999999999999999998 6899999999
Q ss_pred HHHHHHHHhcCCC-----Ccccccccc--cc-CCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHh
Q 023512 193 KDILMRVISQNLP-----ADSTLVEKV--MT-PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264 (281)
Q Consensus 193 ~di~~~~~~~~~~-----~~~~~v~~~--~~-~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~ 264 (281)
+|+++.+...... ....++.++ |. ++++++.+++++.++++.|.+++.+++||+|++|+++|+||..|++++
T Consensus 169 ~dl~~~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~ 248 (330)
T 2v8q_E 169 KRILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINL 248 (330)
T ss_dssp HHHHHHHHHHSCSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGG
T ss_pred HHHHHHHHHHhhccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHH
Confidence 9998555432211 112345554 44 788999999999999999999999999999988999999999999987
Q ss_pred hh
Q 023512 265 AV 266 (281)
Q Consensus 265 ~~ 266 (281)
..
T Consensus 249 ~~ 250 (330)
T 2v8q_E 249 AA 250 (330)
T ss_dssp GG
T ss_pred Hh
Confidence 65
No 12
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.90 E-value=2.2e-22 Score=173.44 Aligned_cols=207 Identities=14% Similarity=0.173 Sum_probs=154.9
Q ss_pred cccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHh
Q 023512 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (281)
Q Consensus 40 ~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~--~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~ 115 (281)
+.+++|+|++ +++++++++|+.+|++.|.+++++++||+++ ++++|+++..|++........... ......
T Consensus 21 ~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~-~~~~~~---- 95 (334)
T 2qrd_G 21 SRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSS-FPEAIA---- 95 (334)
T ss_dssp HSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCS-CGGGGG----
T ss_pred cCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccC-CccHHH----
Confidence 5799999975 5788999999999999999999999999985 699999999999875433211000 000000
Q ss_pred hHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-C-Ce----eeEe
Q 023512 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NK----PRGI 189 (281)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~----~~Gi 189 (281)
. .. ......+.+.. .++|....+..++.+++++.++++.|.+++.+++||++ + +. ++|+
T Consensus 96 ~------~~----~~~~~~i~~~l-----~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Gi 160 (334)
T 2qrd_G 96 E------ID----KFRLLGLREVE-----RKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSV 160 (334)
T ss_dssp G------GG----SCBHHHHHHHH-----HHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEE
T ss_pred H------Hh----hhchhhHHHHH-----HhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEE
Confidence 0 00 00011111111 23454212238999999999999999999999999998 4 34 9999
Q ss_pred eeHHHHHHHHHhcCC--CCccccccc---cccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHh
Q 023512 190 LTSKDILMRVISQNL--PADSTLVEK---VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264 (281)
Q Consensus 190 vt~~di~~~~~~~~~--~~~~~~v~~---~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~ 264 (281)
+|.+|+++.+..... .....++.+ +|.++++++++++++.++++.|.+++.+++||+|++|+++|+||..|++++
T Consensus 161 vt~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~ 240 (334)
T 2qrd_G 161 LTQYRILKFISMNCKETAMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHL 240 (334)
T ss_dssp EEHHHHHHHHHHHCGGGGGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHH
T ss_pred eeHHHHHHHHHhhccchhhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHH
Confidence 999999855543211 112347788 488899999999999999999999999999999988999999999999987
Q ss_pred hh
Q 023512 265 AV 266 (281)
Q Consensus 265 ~~ 266 (281)
..
T Consensus 241 ~~ 242 (334)
T 2qrd_G 241 IQ 242 (334)
T ss_dssp HT
T ss_pred hh
Confidence 54
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.86 E-value=5.1e-22 Score=154.76 Aligned_cols=146 Identities=21% Similarity=0.296 Sum_probs=113.9
Q ss_pred CCcccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhh
Q 023512 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (281)
Q Consensus 38 ~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (281)
+.+.+|+|+|+++++++++++|+.+|+++|.+++++++||+|+ |+++|+||..|+++.............
T Consensus 15 l~~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~--------- 85 (170)
T 4esy_A 15 IRQVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEI--------- 85 (170)
T ss_dssp HHTSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHH---------
T ss_pred HcCCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhh---------
Confidence 3467999999999999999999999999999999999999985 999999999999764322111000000
Q ss_pred HhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHH
Q 023512 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196 (281)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~ 196 (281)
.. ...+..............++.++|+ +++.++++++++.+|++.|.+++++++||+++|+++|+||..|++
T Consensus 86 ----~~--~~~~~~~~~~~~~~~~~~~v~~im~--~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGivt~~Dil 157 (170)
T 4esy_A 86 ----LS--RAIPAPEVEHLFETGRKLTASAVMT--QPVVTAAPEDSVGSIADQMRRHGIHRIPVVQDGVPVGIVTRRDLL 157 (170)
T ss_dssp ----HT--TTSCHHHHHHHHHHHTTCBHHHHCB--CCSCCBCTTSBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHT
T ss_pred ----hh--hccchhhHHhhhccccccchhhhcc--cCcccCCcchhHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHHH
Confidence 00 0000112233344456678999998 889999999999999999999999999999999999999999998
Q ss_pred HHHH
Q 023512 197 MRVI 200 (281)
Q Consensus 197 ~~~~ 200 (281)
+.++
T Consensus 158 ~~l~ 161 (170)
T 4esy_A 158 KLLL 161 (170)
T ss_dssp TTSC
T ss_pred HHHH
Confidence 4443
No 14
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.86 E-value=2.8e-21 Score=148.37 Aligned_cols=124 Identities=20% Similarity=0.257 Sum_probs=109.5
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCC---CccccccccccC
Q 023512 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP---ADSTLVEKVMTP 217 (281)
Q Consensus 142 ~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~---~~~~~v~~~~~~ 217 (281)
.++.++|+|.+++.++++++|+.+|++.|.+++++++||+| +|+++|++|.+|+++.+...... ....++.++|.+
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~~ 94 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKT 94 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCBC
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhcC
Confidence 46889999888999999999999999999999999999999 79999999999998666554322 134589999999
Q ss_pred CCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 218 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
+++++++++++.+|++.|.+++ .+||+|++|+++|+||.+||+++...
T Consensus 95 ~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~ 142 (156)
T 3k6e_A 95 DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp SCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHH
Confidence 9999999999999999999876 49999999999999999999998754
No 15
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.85 E-value=2.5e-21 Score=150.80 Aligned_cols=128 Identities=24% Similarity=0.253 Sum_probs=110.2
Q ss_pred hhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcC-------------
Q 023512 138 RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN------------- 203 (281)
Q Consensus 138 ~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~------------- 203 (281)
.+...++.++|+ +++.++++++|+.+|++.|.+++++++||+| +|+++|+||.+|+++......
T Consensus 14 ~l~~~~V~diM~--~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~ 91 (170)
T 4esy_A 14 AIRQVPIRDILT--SPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIP 91 (170)
T ss_dssp HHHTSBGGGGCC--SCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSC
T ss_pred HHcCCCHHHhcC--CCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccc
Confidence 445668999998 7899999999999999999999999999999 899999999999974321110
Q ss_pred --------CCCccccccccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 204 --------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 204 --------~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
......+++++|+++++++.+++++.+|+++|.+++++++||+| +|+++|+||.+||+++....
T Consensus 92 ~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~~~ 163 (170)
T 4esy_A 92 APEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLLLE 163 (170)
T ss_dssp HHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSCCC
T ss_pred hhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHHhc
Confidence 00113478999999999999999999999999999999999998 69999999999999986543
No 16
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.84 E-value=2.7e-20 Score=153.52 Aligned_cols=218 Identities=17% Similarity=0.200 Sum_probs=140.4
Q ss_pred cccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHH-----HHHHhhhhHHHH
Q 023512 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARME-----RAAEKGKAIAAA 113 (281)
Q Consensus 40 ~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~-----~~~~~~~~~~~~ 113 (281)
..+|+++|+++++++++++++.+|+++|.+++++++||+|+ |+++|+++..|+++....... ........+...
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~~ 85 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDT 85 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHHH
Confidence 67999999999999999999999999999999999999996 999999999999876542210 000011111111
Q ss_pred HhhHhhhhCCCCCChhhHHHHH-HHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCC--------
Q 023512 114 VEGVEKHWGTSISGPNTFIETL-RERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN-------- 184 (281)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~-------- 184 (281)
..+... .+.... ......+ ...+....+.+.+.+ .++..+.. -.++...+.+.+.++++++++.
T Consensus 86 l~~~~l-~~~~~~--~~~~g~~~i~a~~~~~~~~~~~~-~~ivIvgd---r~~~~~~~i~~~~~~liit~~~~~~~~v~~ 158 (245)
T 3l2b_A 86 LSAEAQ-NINEER--KVFPGKVVVAAMQAESLKEFISE-GDIAIAGD---RAEIQAELIELKVSLLIVTGGHTPSKEIIE 158 (245)
T ss_dssp TTCEEE-ECCTTC--CCCCSCEEECCSCGGGGGGTCCT-TCEEEECS---CHHHHHHHHHTTCSEEEECTTCCCCHHHHH
T ss_pred hCCEEE-eccCCc--ceeeeeEEEEeCChHHHHhcCCC-CCEEEECC---CHHHHHHHHHcCCCEEEECCCCCCCHHHHH
Confidence 111110 000000 0000000 000011122333332 44444432 3778888888999999888632
Q ss_pred -----eeeEeeeHHHHHHHHHhcCCCCcccccccccc-CCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEh
Q 023512 185 -----KPRGILTSKDILMRVISQNLPADSTLVEKVMT-PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDV 258 (281)
Q Consensus 185 -----~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~-~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~ 258 (281)
.+..+.|..|.+. ..... ....+++++|+ +++.++++++++.++++.|.+++++++||+|++|+++|+||.
T Consensus 159 ~a~~~~~~~i~t~~d~~~-~~~~~--~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~ 235 (245)
T 3l2b_A 159 LAKKNNITVITTPHDSFT-ASRLI--VQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIAR 235 (245)
T ss_dssp HHHHHTCEEEECSSCHHH-HHHHG--GGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEC
T ss_pred HHHHcCCeEEEeCCChHH-HHHHH--hcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEH
Confidence 1346677777653 22211 12457999999 899999999999999999999999999999999999999999
Q ss_pred hhHHHhhhc
Q 023512 259 IHITHAAVA 267 (281)
Q Consensus 259 ~di~~~~~~ 267 (281)
+|++++..+
T Consensus 236 ~dll~~~~~ 244 (245)
T 3l2b_A 236 FHLISTHKK 244 (245)
T ss_dssp C--------
T ss_pred HHhhchhhc
Confidence 999987653
No 17
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.84 E-value=4.6e-20 Score=140.24 Aligned_cols=123 Identities=19% Similarity=0.206 Sum_probs=110.5
Q ss_pred hcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-C-CeeeEeeeHHHHHHHHHhcCCCCcccccccccc
Q 023512 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (281)
Q Consensus 139 ~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~ 216 (281)
+...++.++|++..++.++++++++.++++.|.+++++++||++ + |+++|+||.+|+++.+.... ..++.++|
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----~~~v~~~m- 94 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN----KIELEEIL- 94 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----CCCGGGTC-
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC----CccHHHhc-
Confidence 45678999998545899999999999999999999999999999 5 89999999999985554432 45899999
Q ss_pred CCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhh
Q 023512 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (281)
Q Consensus 217 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~ 266 (281)
++++++++++++.++++.|.+++.+.+||+|++|+++|+||..|++++..
T Consensus 95 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 95 RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 88999999999999999999999999999998899999999999998854
No 18
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.83 E-value=1.6e-20 Score=139.65 Aligned_cols=123 Identities=16% Similarity=0.178 Sum_probs=107.0
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe--CCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCe
Q 023512 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (281)
Q Consensus 143 ~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~--~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~ 220 (281)
++.++|++..++.++++++++.+|++.|.+++++++||++ +|+++|++|.+|+++ ...........++.++| ++++
T Consensus 3 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~-~~~~~~~~~~~~v~~~m-~~~~ 80 (130)
T 3hf7_A 3 SVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYR-LMTEKKEFTKEIMLRAA-DEIY 80 (130)
T ss_dssp BHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHH-HHTSSSCCCHHHHHHHS-BCCC
T ss_pred CHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHH-HHhccCccchhhHHHhc-cCCe
Confidence 5678887556799999999999999999999999999996 489999999999974 44433333345788998 7789
Q ss_pred eeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
++++++++.++++.|.+++.+.+||+|++|+++|+||..|++++...
T Consensus 81 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 81 FVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp EEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhC
Confidence 99999999999999999999999999989999999999999998654
No 19
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.83 E-value=1.3e-19 Score=137.79 Aligned_cols=137 Identities=18% Similarity=0.336 Sum_probs=108.7
Q ss_pred EEEehHHHHHHHHHhcCCCCcccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEeeC--CeEEEEEehHHHHHH
Q 023512 20 GILTDKDIATRVIARELNLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYD 95 (281)
Q Consensus 20 Gi~t~~d~~~~~~~~~~~~~~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~--~~~vGvi~~~dll~~ 95 (281)
|.++..+ +.++.+...+.+.+++++|++ +++++++++++.+|++.|.+++++++||+++ ++++|+++..|++..
T Consensus 4 g~l~~~e--~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~ 81 (148)
T 3lv9_A 4 GLIDESE--QRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQ 81 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHH
T ss_pred CccCHHH--HHHHHHHhccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHH
Confidence 5555444 345556667889999999998 9999999999999999999999999999986 799999999999765
Q ss_pred HHHHHHHHHHhhhhHHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCc
Q 023512 96 AIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 175 (281)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~ 175 (281)
.... ...++.++| .++.++++++++.++++.|.+++.
T Consensus 82 ~~~~----------------------------------------~~~~v~~~m---~~~~~v~~~~~l~~~~~~m~~~~~ 118 (148)
T 3lv9_A 82 KINE----------------------------------------NKIELEEIL---RDIIYISENLTIDKALERIRKEKL 118 (148)
T ss_dssp HHHH----------------------------------------SCCCGGGTC---BCCEEEETTSBHHHHHHHHHHHTC
T ss_pred HhcC----------------------------------------CCccHHHhc---CCCeEECCCCCHHHHHHHHHhcCC
Confidence 3210 034578888 458899999999999999999999
Q ss_pred cEEEEEe-CCeeeEeeeHHHHHHHHHh
Q 023512 176 SSAVVTV-ENKPRGILTSKDILMRVIS 201 (281)
Q Consensus 176 ~~~~V~~-~~~~~Givt~~di~~~~~~ 201 (281)
+.+||+| +|+++|+||..|+++.+++
T Consensus 119 ~~l~Vvd~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 119 QLAIVVDEYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp SEEEEECTTSSEEEEEEHHHHHHHHHH
T ss_pred eEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 9999999 7999999999999976665
No 20
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.83 E-value=3.7e-20 Score=137.64 Aligned_cols=123 Identities=16% Similarity=0.171 Sum_probs=106.3
Q ss_pred cCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-C-CeeeEeeeHHHHHHHHHhcCCCCccccccccccC
Q 023512 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217 (281)
Q Consensus 140 ~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~ 217 (281)
...++.++|.+..++.++++++++.+|++.|.+++++++||++ + |+++|++|.+|+++...... ...++.++| +
T Consensus 4 ~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~---~~~~v~~~m-~ 79 (130)
T 3i8n_A 4 QDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS---GQKQLGAVM-R 79 (130)
T ss_dssp ---CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT---TTSBHHHHS-E
T ss_pred CcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC---CcCCHHHHh-c
Confidence 3457899998656678999999999999999999999999999 5 89999999999985544332 245899999 4
Q ss_pred CCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhh
Q 023512 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (281)
Q Consensus 218 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~ 266 (281)
++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|++++..
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 6889999999999999999999999999998999999999999998753
No 21
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.82 E-value=1.7e-19 Score=134.43 Aligned_cols=124 Identities=28% Similarity=0.413 Sum_probs=109.8
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCe
Q 023512 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (281)
Q Consensus 141 ~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~ 220 (281)
..++.++|. +++.++++++++.+|++.|.+++.+++||+++|+++|++|.+|++ +.+..... ...++.++|.+++.
T Consensus 3 ~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~-~~~~~~~~-~~~~v~~~~~~~~~ 78 (133)
T 2ef7_A 3 EEIVKEYMK--TQVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIV-KAIGKGKS-LETKAEEFMTASLI 78 (133)
T ss_dssp CCBGGGTSB--CSCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHHHTTCC-TTCBGGGTSEECCC
T ss_pred cccHHHhcc--CCCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHH-HHHhcCCC-cccCHHHHcCCCCE
Confidence 356888997 678999999999999999999999999999989999999999997 44443332 24589999999999
Q ss_pred eeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
++++++++.++++.|.+++.+++||+|++|+++|+||..|++++....
T Consensus 79 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 79 TIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp CEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 999999999999999999999999999889999999999999986654
No 22
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.82 E-value=9.2e-20 Score=142.19 Aligned_cols=124 Identities=15% Similarity=0.162 Sum_probs=108.8
Q ss_pred hcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-C-CeeeEeeeHHHHHHHHHhcCCCCcccccccccc
Q 023512 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (281)
Q Consensus 139 ~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~ 216 (281)
+...++.++|.+..++.++++++++.+|++.|.+++++++||++ + |+++|+||.+|+++..... . ..++.++|
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-~---~~~v~~im- 113 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAG-E---RLELVDLV- 113 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTT-C---CCCGGGGC-
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhc-C---cccHHHHh-
Confidence 44567999998766789999999999999999999999999999 5 8999999999998544432 2 45899999
Q ss_pred CCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 217 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
++++++++++++.++++.|.+++.+.+||+|++|+++|+||..|++++...
T Consensus 114 ~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 114 KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhC
Confidence 899999999999999999999999999999988999999999999998654
No 23
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.82 E-value=9.9e-20 Score=133.61 Aligned_cols=118 Identities=23% Similarity=0.250 Sum_probs=105.5
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCee
Q 023512 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221 (281)
Q Consensus 143 ~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~~ 221 (281)
++.++|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|.+|+++.+... . .++.++|.+++.+
T Consensus 2 ~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~-~----~~v~~~~~~~~~~ 74 (122)
T 3kpb_A 2 LVKDILS--KPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQN-K----KTIEEIMTRNVIT 74 (122)
T ss_dssp BHHHHCC--SCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTT-C----CBGGGTSBSSCCC
T ss_pred chHHhhC--CCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhc-c----cCHHHHhcCCCeE
Confidence 4667787 6789999999999999999999999999999 89999999999997444432 2 2799999999999
Q ss_pred eeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 222 v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
+++++++.++++.|.+++.+++||+|++|+++|+||..|++++...
T Consensus 75 v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 75 AHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp EETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred ECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 9999999999999999999999999988999999999999998654
No 24
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.82 E-value=7.7e-20 Score=135.50 Aligned_cols=123 Identities=13% Similarity=0.082 Sum_probs=108.8
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCe
Q 023512 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (281)
Q Consensus 141 ~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~ 220 (281)
..+++++|. +++.++++++++.++++.|.+++.+++||+++|+++|++|.+|++ +...... ....++.++|.+++.
T Consensus 4 s~~v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~-~~~~~~~-~~~~~v~~~m~~~~~ 79 (128)
T 3gby_A 4 SVTFSYLAE--TDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLL-EGRKGWP-TVKEKLGEELLETVR 79 (128)
T ss_dssp TCBGGGGCB--CCSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-TTCSSSC-CTTCBCCGGGCBCCC
T ss_pred ceEHHHhhc--CCcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHH-HHHhhCC-cccCcHHHHccCCCc
Confidence 356889998 779999999999999999999999999999999999999999997 3333222 122579999999999
Q ss_pred eeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
++.+++++.++++.|.+++.+++||+|++|+++|+||..|++++...
T Consensus 80 ~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 80 SYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp CBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred EECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999999989999999999999998654
No 25
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.82 E-value=8.5e-20 Score=136.48 Aligned_cols=125 Identities=26% Similarity=0.460 Sum_probs=108.7
Q ss_pred CccccccCC-CceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCee
Q 023512 143 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221 (281)
Q Consensus 143 ~v~~~m~~~-~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~~ 221 (281)
++.++|.+. +++.++++++++.++++.|.+++.+++||+++|+++|++|.+|+++.+..........++.++|.+++.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~ 86 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAY 86 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCSCCC
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCCCeE
Confidence 456677532 5688999999999999999999999999999999999999999975565544334466899999999999
Q ss_pred eeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 222 v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
+++++++.++++.|.+++.+++||+| +|+++|+||..|++++....
T Consensus 87 v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 87 VDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp BCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC-
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHhc
Confidence 99999999999999999999999999 79999999999999986543
No 26
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.82 E-value=1.2e-19 Score=133.68 Aligned_cols=121 Identities=22% Similarity=0.240 Sum_probs=106.6
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCeee
Q 023512 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222 (281)
Q Consensus 143 ~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~~v 222 (281)
++.++|. +++.++++++++.++++.|.+++.+++||+++|+++|++|.+|++ +.+.........++.++|.+++.++
T Consensus 2 ~v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~-~~~~~~~~~~~~~v~~~m~~~~~~v 78 (125)
T 1pbj_A 2 RVEDVMV--TDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVL-EAIAEGDDLAEVKVWEVMERDLVTI 78 (125)
T ss_dssp CHHHHCB--CSCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHH-HHHHHTCCTTTSBHHHHCBCGGGEE
T ss_pred CHHHhcC--CCceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHH-HHHhcCCcccccCHHHHcCCCCeEE
Confidence 3566776 679999999999999999999999999999999999999999997 4444433334568999999999999
Q ss_pred eCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 223 TIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 223 ~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
++++++.++++.|.+++.+++||+|+ |+++|+||..|++++...
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 79 SPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999997 999999999999998654
No 27
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.82 E-value=4e-20 Score=138.57 Aligned_cols=124 Identities=20% Similarity=0.216 Sum_probs=106.1
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-C-CeeeEeeeHHHHHHHHHhcCCCCccccccccccCCC
Q 023512 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (281)
Q Consensus 142 ~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~ 219 (281)
.++.++|++..++.++++++++.+|++.|.+++++++||++ + |+++|+||.+|+++. +.... ....++.++|.+ +
T Consensus 3 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~-~~~~~-~~~~~v~~~m~~-~ 79 (136)
T 3lfr_A 3 LQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPL-ILKAD-GDSDDVKKLLRP-A 79 (136)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGG-GGSSS-GGGCCGGGTCBC-C
T ss_pred CChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHH-HHhcc-CCCcCHHHHcCC-C
Confidence 35778887656789999999999999999999999999999 5 799999999999743 33222 235589999966 8
Q ss_pred eeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 220 ~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
+++++++++.++++.|.+++.+.+||+|++|+++|+||..|++++....
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~ 128 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGD 128 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC---
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999986653
No 28
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.81 E-value=4.4e-20 Score=136.65 Aligned_cols=121 Identities=20% Similarity=0.251 Sum_probs=104.2
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-C-CeeeEeeeHHHHHHHHHhcCCCCccccccccccCCC
Q 023512 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (281)
Q Consensus 142 ~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~ 219 (281)
.++.++|.+..++.++++++++.++++.|.+++++++||++ + |+++|++|.+|+++.+.... ...+++++|.+ +
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~---~~~~v~~~m~~-~ 78 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDA---EAFSMDKVLRT-A 78 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTC---CCCCHHHHCBC-C
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccC---CCCCHHHHcCC-C
Confidence 35778887544589999999999999999999999999999 5 89999999999974332221 24589999955 7
Q ss_pred eeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhh
Q 023512 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (281)
Q Consensus 220 ~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~ 266 (281)
.++++++++.++++.|.+++.+.+||+|++|+++|+||..|++++..
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIV 125 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC-
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 89999999999999999999999999999999999999999998753
No 29
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.81 E-value=9e-20 Score=139.82 Aligned_cols=128 Identities=20% Similarity=0.250 Sum_probs=110.3
Q ss_pred hcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCC---cccccccc
Q 023512 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPA---DSTLVEKV 214 (281)
Q Consensus 139 ~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~---~~~~v~~~ 214 (281)
+...++.++|.+..++.++++++++.+|++.|.+++++++||+| +|+++|++|.+|+++.+....... ...++.++
T Consensus 12 l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~ 91 (156)
T 3ctu_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHM 91 (156)
T ss_dssp HHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGG
T ss_pred HHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHHh
Confidence 44457899998777899999999999999999999999999999 899999999999985555432211 14589999
Q ss_pred ccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 215 ~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
|.++++++.+++++.++++.|.+++ ++||+|++|+++|+||.+|++++....
T Consensus 92 m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~ 143 (156)
T 3ctu_A 92 TKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp CBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHH
T ss_pred ccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 9999999999999999999999986 799999899999999999999986654
No 30
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.81 E-value=2.8e-19 Score=134.13 Aligned_cols=125 Identities=25% Similarity=0.459 Sum_probs=110.8
Q ss_pred cCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccccccCC
Q 023512 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218 (281)
Q Consensus 140 ~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~ 218 (281)
...++.++|. +++.++++++++.++++.|.+++++++||++ +|+++|+||.+|++++++.... ....++.++|.++
T Consensus 5 ~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-~~~~~v~~~m~~~ 81 (138)
T 2yzi_A 5 MKAPIKVYMT--KKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-PYDIPVERIMTRN 81 (138)
T ss_dssp TTSBGGGTCB--CCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-CTTSBGGGTCBCS
T ss_pred hhhhHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-cccCCHHHHhhCC
Confidence 3457889997 7899999999999999999999999999999 8999999999999755554433 2356899999999
Q ss_pred CeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 219 ~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
+.++++++++.++++.|.+++.+++ |+|++|+++|+||..|++++....
T Consensus 82 ~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 82 LITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRR 130 (138)
T ss_dssp CCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCC
T ss_pred CeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHH
Confidence 9999999999999999999999999 999889999999999999986543
No 31
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.81 E-value=3.6e-19 Score=134.08 Aligned_cols=126 Identities=21% Similarity=0.311 Sum_probs=109.6
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CC--eeeEeeeHHHHHHHHHhcCCCCccccccccccCC
Q 023512 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-EN--KPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218 (281)
Q Consensus 142 ~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~--~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~ 218 (281)
.++.++|. +++.++++++++.++++.|.+++++++||++ +| +++|+||.+|+++ .+...... ..++.++|.++
T Consensus 5 ~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~-~~~~~~~~-~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLK--RPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILR-AVAQRLDL-DGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCC--SCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHH-HHHTTCCT-TSBSGGGCBCC
T ss_pred eEHHHHhc--CCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHH-HHhcCCCC-CCCHHHHcCCC
Confidence 36888997 7899999999999999999999999999999 56 8999999999974 44333222 45899999999
Q ss_pred CeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhchHHHH
Q 023512 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATEILL 272 (281)
Q Consensus 219 ~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~~~~~ 272 (281)
+.+++++ ++.++++.|.+++.+++||+|++|+++|+||..||+++......+.
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~~l~ 133 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERAILLELA 133 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHHHHHHHH
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHHHHHHHh
Confidence 9999999 9999999999999999999998899999999999999876544433
No 32
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.81 E-value=4e-19 Score=136.71 Aligned_cols=130 Identities=21% Similarity=0.237 Sum_probs=113.0
Q ss_pred HHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCcccccc
Q 023512 134 TLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVE 212 (281)
Q Consensus 134 ~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~ 212 (281)
.+...+...++.++|. + +.++++++++.+|++.|.+++++++||++ +|+++|+||.+|+++.++.. ......++.
T Consensus 9 ~l~~~l~~~~v~~im~--~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~-~~~~~~~v~ 84 (159)
T 3fv6_A 9 LLADKLKKLQVKDFQS--I-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQ-QELTSVPVH 84 (159)
T ss_dssp HHHHHHTTCBGGGSCB--C-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSC-SCTTTCBGG
T ss_pred HHHHHHhhCCHHHHcC--C-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhcc-CcccCcCHH
Confidence 3455667778999997 4 45999999999999999999999999999 89999999999998545433 333356899
Q ss_pred ccccC--CCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCC---cEEEEEEhhhHHHhhhc
Q 023512 213 KVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDG---DVVDVVDVIHITHAAVA 267 (281)
Q Consensus 213 ~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~---~~~Gvis~~di~~~~~~ 267 (281)
++|.+ +++++.+++++.++++.|.+++++++||+|++| +++|+||..||+++...
T Consensus 85 ~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 85 IIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp GTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred HHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 99997 899999999999999999999999999999888 99999999999998654
No 33
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.81 E-value=9.7e-20 Score=135.20 Aligned_cols=119 Identities=14% Similarity=0.163 Sum_probs=104.0
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-C-CeeeEeeeHHHHHHHHHhcCCCCccccccccccCCC
Q 023512 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (281)
Q Consensus 142 ~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~ 219 (281)
.++.++|++..++.++++++++.+|++.|.+++++++||++ + |+++|+||.+|+++ .... ...++.++|. ++
T Consensus 5 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~-~~~~----~~~~v~~~m~-~~ 78 (129)
T 3jtf_A 5 RTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLR-YMLE----PALDIRSLVR-PA 78 (129)
T ss_dssp CBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGG-GGTC----TTSCGGGGCB-CC
T ss_pred CCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHh-Hhcc----CCcCHHHHhC-CC
Confidence 46788998666789999999999999999999999999999 4 89999999999973 3322 2457899985 48
Q ss_pred eeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhh
Q 023512 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (281)
Q Consensus 220 ~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~ 266 (281)
+++.+++++.++++.|.+++.+.+||+|++|+++|+||..|++++..
T Consensus 79 ~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 79 VFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp CEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred eEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 89999999999999999999999999998899999999999998854
No 34
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.81 E-value=1.4e-19 Score=137.84 Aligned_cols=128 Identities=16% Similarity=0.181 Sum_probs=109.7
Q ss_pred hcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCC----CCccccccc
Q 023512 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL----PADSTLVEK 213 (281)
Q Consensus 139 ~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~----~~~~~~v~~ 213 (281)
+...++.++|.+..++.++++++++.+|++.|.+++++++||+| +|+++|+||.+|+++.+..... .....++.+
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~ 91 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQ 91 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGG
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHH
Confidence 34457889998545699999999999999999999999999999 8999999999999744432111 123468999
Q ss_pred cccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 214 ~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
+|.+++.++.+++++.++++.|.+++. +||+|++|+++|+||..||+++....
T Consensus 92 ~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~ 144 (150)
T 3lqn_A 92 VMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKK 144 (150)
T ss_dssp TCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred HhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHH
Confidence 999999999999999999999999986 99999899999999999999987654
No 35
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.81 E-value=2e-19 Score=137.54 Aligned_cols=124 Identities=15% Similarity=0.154 Sum_probs=109.5
Q ss_pred cCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEE-e--CCeeeEeeeHHHHHHHHHhcCCCCcccccccccc
Q 023512 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVT-V--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (281)
Q Consensus 140 ~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~-~--~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~ 216 (281)
...++.++|.+..++.++++++++.+|++.|.+++++++||+ + +|+++|+||.+|+++.+.... ..++.++|
T Consensus 18 ~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~----~~~v~~~m- 92 (153)
T 3oco_A 18 NDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD----KAKISTIM- 92 (153)
T ss_dssp HHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT----TSBGGGTC-
T ss_pred CCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC----CCcHHHHh-
Confidence 345789999844489999999999999999999999999999 5 489999999999985554432 45899999
Q ss_pred CCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 217 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
++++++.+++++.++++.|.+++.+.+||+|++|+++|+||..|++++....
T Consensus 93 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~ 144 (153)
T 3oco_A 93 RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGN 144 (153)
T ss_dssp BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC-
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhcc
Confidence 8999999999999999999999999999999889999999999999997654
No 36
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=1.7e-19 Score=139.69 Aligned_cols=130 Identities=22% Similarity=0.342 Sum_probs=113.9
Q ss_pred hhcCCCccccccCC-CceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccccc
Q 023512 138 RMFRPSLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215 (281)
Q Consensus 138 ~~~~~~v~~~m~~~-~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~ 215 (281)
.+...++.++|.+. .++.++++++++.+|++.|.+++.+++||++ +|+++|+||.+|+++.+..........++.++|
T Consensus 20 ~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 99 (165)
T 3fhm_A 20 QGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAM 99 (165)
T ss_dssp SSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGGTSBGGGTS
T ss_pred hhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccccCCHHHHh
Confidence 34566788999742 3699999999999999999999999999999 889999999999986665543233456899999
Q ss_pred cCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 216 ~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
.++++++.+++++.++++.|.+++.+++||+|+ |+++|+||..||+++....
T Consensus 100 ~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~ 151 (165)
T 3fhm_A 100 TKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGE 151 (165)
T ss_dssp BSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC
T ss_pred cCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHH
Confidence 999999999999999999999999999999997 9999999999999997665
No 37
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.80 E-value=4.8e-19 Score=132.78 Aligned_cols=125 Identities=27% Similarity=0.362 Sum_probs=109.1
Q ss_pred hcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHH-HHHHHhcCCCCcccccccccc
Q 023512 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI-LMRVISQNLPADSTLVEKVMT 216 (281)
Q Consensus 139 ~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di-~~~~~~~~~~~~~~~v~~~~~ 216 (281)
+...++.++|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|.+|+ + ..+.... ....++.++|.
T Consensus 5 l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~-~~~~~~~-~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMT--KNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGY-NLIRDKY-TLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSB--CSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHH-HHTTTCC-CSSCBHHHHSC
T ss_pred cccCCHHHhhc--CCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHH-HHHhhcc-cCCcCHHHHhC
Confidence 44567899997 6789999999999999999999999999999 8999999999999 7 4443322 22458999999
Q ss_pred CCCeeeeCCCCHHHHHHHhHhCC-----CCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 217 PNPECATIDTPIVDALHIMHDGK-----FLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 217 ~~~~~v~~~~~l~~~~~~~~~~~-----~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
+++.++++++++.++++.|.+++ .+++||+|++|+++|+||..|++++...
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999 9999999988999999999999987654
No 38
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.80 E-value=1.3e-19 Score=135.17 Aligned_cols=123 Identities=16% Similarity=0.310 Sum_probs=108.5
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCe
Q 023512 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (281)
Q Consensus 142 ~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~ 220 (281)
.++.++|. +++.++++++++.++++.|.+++.+++||+| +|+++|++|.+|++++.+.........++.++|.+++.
T Consensus 8 ~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~ 85 (133)
T 1y5h_A 8 TTARDIMN--AGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIY 85 (133)
T ss_dssp CCHHHHSE--ETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTTCCC
T ss_pred cCHHHHhc--CCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcCCCE
Confidence 46778887 6788999999999999999999999999997 89999999999997445554444445689999999999
Q ss_pred eeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
++++++++.++++.|.+++.+++||+|+ |+++|+||..||+++...
T Consensus 86 ~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 86 YVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp CEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC-
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 9999999999999999999999999997 999999999999988653
No 39
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.80 E-value=3.1e-19 Score=135.82 Aligned_cols=121 Identities=21% Similarity=0.244 Sum_probs=107.6
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCe
Q 023512 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (281)
Q Consensus 142 ~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~ 220 (281)
.++.++|.+..++.++++++++.++++.|.+++++++||++ +|+++|+||..|++ +.+.........++.++|.+++.
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~v~~~m~~~~~ 106 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLR-RVFDTGVDMRDASIADVMTRGGI 106 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHH-HHHCSSSCCTTCBHHHHSEESCC
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHH-HHHhcCCCcccCcHHHHcCCCCe
Confidence 57999998333899999999999999999999999999999 89999999999997 55554444346689999999999
Q ss_pred eeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHh
Q 023512 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264 (281)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~ 264 (281)
++.+++++.++++.|.+++.+++||+|++ +++|+||..||+++
T Consensus 107 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~a 149 (149)
T 3k2v_A 107 RIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLRA 149 (149)
T ss_dssp EECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTCC
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhcC
Confidence 99999999999999999999999999965 99999999999864
No 40
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.80 E-value=9e-19 Score=136.55 Aligned_cols=142 Identities=14% Similarity=0.246 Sum_probs=104.0
Q ss_pred CcEEEEEehHHHHHHHHHhcCCCCccccccccc--CCCeEecCCchHHHHHHHhHhCCCcEeeEeeC--CeEEEEEehHH
Q 023512 16 ALLCGILTDKDIATRVIARELNLEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAK 91 (281)
Q Consensus 16 ~~~~Gi~t~~d~~~~~~~~~~~~~~~~v~dim~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~--~~~vGvi~~~d 91 (281)
+.-.|.++..+ +..+.+...+.+.+++++|+ ++++++++++++.+|++.|.+++++++||+++ ++++|+|+..|
T Consensus 19 ~~~~g~l~~~e--~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~d 96 (172)
T 3lhh_A 19 GSSAGVIEHNE--HAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQ 96 (172)
T ss_dssp --------------------------CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHH
T ss_pred HHHcCCCCHHH--HHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHH
Confidence 34456776554 24445556788899999999 78899999999999999999999999999985 89999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHH
Q 023512 92 CLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKML 171 (281)
Q Consensus 92 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~ 171 (281)
++..... -...++.++| +++.++++++++.++++.|.
T Consensus 97 l~~~~~~----------------------------------------~~~~~v~~im---~~~~~v~~~~~l~~a~~~m~ 133 (172)
T 3lhh_A 97 LLSESIA----------------------------------------GERLELVDLV---KNCNFVPNSLSGMELLEHFR 133 (172)
T ss_dssp HHHHHHT----------------------------------------TCCCCGGGGC---BCCEEEETTCCHHHHHHHHH
T ss_pred HHHHHhh----------------------------------------cCcccHHHHh---cCCeEeCCCCCHHHHHHHHH
Confidence 9865211 0134588888 56889999999999999999
Q ss_pred HcCccEEEEEe-CCeeeEeeeHHHHHHHHHhc
Q 023512 172 ELRLSSAVVTV-ENKPRGILTSKDILMRVISQ 202 (281)
Q Consensus 172 ~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~ 202 (281)
+++.+.+||+| +|+++|+||..|+++.++..
T Consensus 134 ~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~ 165 (172)
T 3lhh_A 134 TTGSQMVFVVDEYGDLKGLVTLQDMMDALTGE 165 (172)
T ss_dssp HHTCSEEEEECTTSCEEEEEEHHHHHHHHHTT
T ss_pred HcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCC
Confidence 99999999999 79999999999999776654
No 41
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.80 E-value=2.4e-19 Score=137.55 Aligned_cols=124 Identities=23% Similarity=0.401 Sum_probs=108.8
Q ss_pred CccccccCC----CceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHHHHhcCCCCccccccccccCC
Q 023512 143 SLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218 (281)
Q Consensus 143 ~v~~~m~~~----~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~ 218 (281)
++.++|.+. +++.++++++++.+|++.|.+++++++||.++|+++|++|.+|+++.+..........++.++|.++
T Consensus 8 ~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 87 (157)
T 4fry_A 8 TVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQERSSKATRVEEIMTAK 87 (157)
T ss_dssp BHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBSS
T ss_pred HHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCCC
Confidence 466777643 5579999999999999999999999999977999999999999986555544443466899999999
Q ss_pred CeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 219 ~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
+.++.+++++.++++.|.+++.+++||+| +|+++|+||..||+++...
T Consensus 88 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 88 VRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp CCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHT
T ss_pred CcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 99999999999999999999999999999 7999999999999998654
No 42
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.79 E-value=3.5e-19 Score=135.60 Aligned_cols=127 Identities=27% Similarity=0.376 Sum_probs=107.2
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhc------------CCCCcc
Q 023512 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQ------------NLPADS 208 (281)
Q Consensus 142 ~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~------------~~~~~~ 208 (281)
.++.++|.+..++.++++++++.++++.|.+++++++||++ +|+++|++|..|++..+... ......
T Consensus 5 ~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
T 4gqw_A 5 YTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNG 84 (152)
T ss_dssp SBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----C
T ss_pred EEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhcc
Confidence 46889998544799999999999999999999999999999 78999999999996311100 011224
Q ss_pred ccccccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 209 ~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
.++.++|.++++++++++++.++++.|.+++.+++||+|++|+++|+||.+||+++....
T Consensus 85 ~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~ 144 (152)
T 4gqw_A 85 KLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQI 144 (152)
T ss_dssp CBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC-
T ss_pred ccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 589999999999999999999999999999999999999899999999999999987663
No 43
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.79 E-value=8e-19 Score=135.16 Aligned_cols=125 Identities=19% Similarity=0.171 Sum_probs=108.5
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcC-------CCCccccccc
Q 023512 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-------LPADSTLVEK 213 (281)
Q Consensus 142 ~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~-------~~~~~~~v~~ 213 (281)
.++.++|. +++.++++++++.+|++.|.+++++++||+| +|+++|+||.+|+++.+.... ......++.+
T Consensus 5 ~~v~dim~--~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (160)
T 2o16_A 5 IKVEDMMT--RHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFE 82 (160)
T ss_dssp CBGGGTSE--ESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHH
T ss_pred CcHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHH
Confidence 46888997 6789999999999999999999999999999 899999999999985544311 1123558999
Q ss_pred cccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhchH
Q 023512 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269 (281)
Q Consensus 214 ~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~~ 269 (281)
+|.++++++++++++.++++.|.+++.+++||+|+ |+++|+||..||+++....+
T Consensus 83 im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~~~ 137 (160)
T 2o16_A 83 VMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAINLL 137 (160)
T ss_dssp HSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHHHH
T ss_pred HhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHh
Confidence 99999999999999999999999999999999997 99999999999999876543
No 44
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.79 E-value=7.3e-19 Score=137.13 Aligned_cols=123 Identities=15% Similarity=0.178 Sum_probs=108.1
Q ss_pred hcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-C-CeeeEeeeHHHHHHHHHhcCCCCcccccccccc
Q 023512 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (281)
Q Consensus 139 ~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~ 216 (281)
+...++.++|++.+++.++++++++.++++.|.+++++++||++ + |+++|+||.+|++..+.... ..++. |.
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~----~~~v~--~~ 106 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG----RVRRN--RL 106 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----SCCGG--GS
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC----cchhH--hc
Confidence 46678999998656799999999999999999999999999998 4 79999999999985554432 33677 45
Q ss_pred CCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 217 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
++++++++++++.++++.|.+++.+.+||+|++|+++|+||..||+.+...
T Consensus 107 ~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 107 RDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp BCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHC
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhC
Confidence 788999999999999999999999999999989999999999999998654
No 45
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.79 E-value=1.3e-18 Score=133.56 Aligned_cols=122 Identities=21% Similarity=0.310 Sum_probs=106.2
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCccE-EEEEeCCeeeEeeeHHHHHHHHHhc--------------CCCCc
Q 023512 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQ--------------NLPAD 207 (281)
Q Consensus 143 ~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~-~~V~~~~~~~Givt~~di~~~~~~~--------------~~~~~ 207 (281)
++.++|. +++.++++++++.+|++.|.+++.++ +||+++++++|+||..|+++.+... .....
T Consensus 17 ~v~~im~--~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (157)
T 1o50_A 17 DVCKLIS--LKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLI 94 (157)
T ss_dssp HHTTSSC--CCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHHHHHHCCCC-------CCCCCS
T ss_pred cHhhccc--CCCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHc
Confidence 4788887 78999999999999999999999999 9999944999999999998544311 01223
Q ss_pred cccccccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 208 ~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
..++.++|.+ ++++++++++.++++.|.+++.+++||+|++|+++|+||..||+++...
T Consensus 95 ~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 95 AKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp SCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred CCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 5689999999 9999999999999999999999999999988999999999999988653
No 46
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.79 E-value=2.1e-18 Score=135.91 Aligned_cols=124 Identities=24% Similarity=0.278 Sum_probs=110.6
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCe
Q 023512 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (281)
Q Consensus 142 ~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~ 220 (281)
.++.++|. +++.++++++++.+|++.|.+++++++||++ +|+++|++|.+|++..+..........++.++|.+++.
T Consensus 9 ~~v~~im~--~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~~~ 86 (184)
T 1pvm_A 9 MRVEKIMN--SNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPIP 86 (184)
T ss_dssp CBGGGTSB--TTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSSCC
T ss_pred cCHHHhcC--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCCCc
Confidence 56889997 7899999999999999999999999999998 79999999999998544432223345689999999999
Q ss_pred eeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
++.+++++.++++.|.+++.+++||+|++|+++|+||..||+++...
T Consensus 87 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 87 KVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp EEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999999988999999999999998766
No 47
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.79 E-value=7.2e-19 Score=130.62 Aligned_cols=123 Identities=19% Similarity=0.203 Sum_probs=100.6
Q ss_pred CCCcccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHH
Q 023512 37 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112 (281)
Q Consensus 37 ~~~~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~--~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~ 112 (281)
.+.+.+++++|++ +++++++++++.+|++.|.+++++++||+++ ++++|+++..|++.....
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~-------------- 67 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQS-------------- 67 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHT--------------
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhc--------------
Confidence 3567899999994 5678999999999999999999999999984 799999999999865211
Q ss_pred HHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeee
Q 023512 113 AVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILT 191 (281)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt 191 (281)
.....++.++|. ++.++++++++.++++.|.+++.+.+||+| +|+++|+||
T Consensus 68 -------------------------~~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt 119 (130)
T 3i8n_A 68 -------------------------GSGQKQLGAVMR---PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVT 119 (130)
T ss_dssp -------------------------TTTTSBHHHHSE---ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEE
T ss_pred -------------------------CCCcCCHHHHhc---CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEE
Confidence 011234667773 478999999999999999999999999999 799999999
Q ss_pred HHHHHHHHHh
Q 023512 192 SKDILMRVIS 201 (281)
Q Consensus 192 ~~di~~~~~~ 201 (281)
..|+++.+++
T Consensus 120 ~~dil~~l~g 129 (130)
T 3i8n_A 120 LEDIFEHLVG 129 (130)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 9999966653
No 48
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.79 E-value=1e-18 Score=131.85 Aligned_cols=123 Identities=15% Similarity=0.129 Sum_probs=103.3
Q ss_pred CCccc---cccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccccccC
Q 023512 142 PSLST---IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217 (281)
Q Consensus 142 ~~v~~---~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~ 217 (281)
.++.+ +|. +++.++++++++.+|++.|.+++++++||++ +|+++|++|..|+++.+..........++.++|.+
T Consensus 8 ~~v~~~~~~~~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~ 85 (144)
T 2nyc_A 8 IPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMR 85 (144)
T ss_dssp SBGGGSSCCBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC----CCSBHHHHHHH
T ss_pred cchhhcCCCCC--CCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccccccCCccHHHHHhc
Confidence 34556 665 7799999999999999999999999999999 89999999999998544432222234588998875
Q ss_pred ------CCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhh
Q 023512 218 ------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (281)
Q Consensus 218 ------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~ 266 (281)
++.++.+++++.++++.|.+++.+++||+|++|+++|+||..||+++..
T Consensus 86 ~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 86 RSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp CC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 6889999999999999999999999999998899999999999998864
No 49
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.79 E-value=2.1e-18 Score=126.93 Aligned_cols=121 Identities=19% Similarity=0.240 Sum_probs=103.8
Q ss_pred ccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhhh
Q 023512 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (281)
Q Consensus 41 ~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (281)
++++++|.+++.++++++++.+|++.|.+++++.+||+|+|+++|+++..|++......
T Consensus 1 m~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~~~~~~~--------------------- 59 (125)
T 1pbj_A 1 MRVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAIAEG--------------------- 59 (125)
T ss_dssp -CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHHHHHHHT---------------------
T ss_pred CCHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHHHHHhcC---------------------
Confidence 37899999999999999999999999999999999999999999999999997542210
Q ss_pred hCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHHHH
Q 023512 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVI 200 (281)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~~~ 200 (281)
......++.++|. +++.++++++++.++++.|.+++.+++||+++|+++|++|..|+++.+.
T Consensus 60 ----------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 60 ----------------DDLAEVKVWEVME--RDLVTISPRATIKEAAEKMVKNVVWRLLVEEDDEIIGVISATDILRAKM 121 (125)
T ss_dssp ----------------CCTTTSBHHHHCB--CGGGEECTTSCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHC
T ss_pred ----------------CcccccCHHHHcC--CCCeEECCCCCHHHHHHHHHhcCCcEEEEEECCEEEEEEEHHHHHHHHH
Confidence 0112345777786 6799999999999999999999999999999999999999999985543
No 50
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.79 E-value=2.3e-18 Score=128.25 Aligned_cols=123 Identities=15% Similarity=0.186 Sum_probs=106.6
Q ss_pred CcccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHh
Q 023512 39 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (281)
Q Consensus 39 ~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (281)
.+.+++++|.+++.++++++++.+|++.|.+++++.+||+++++++|+++..|++......
T Consensus 2 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~------------------- 62 (133)
T 2ef7_A 2 EEEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIVKAIGKG------------------- 62 (133)
T ss_dssp CCCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHTT-------------------
T ss_pred CcccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHHHHHhcC-------------------
Confidence 4679999999999999999999999999999999999999999999999999997542110
Q ss_pred hhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHH
Q 023512 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (281)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~ 197 (281)
.....++.++|. +++.++++++++.++++.|.+++.+++||++ +|+++|+||..|+++
T Consensus 63 -------------------~~~~~~v~~~~~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~ 121 (133)
T 2ef7_A 63 -------------------KSLETKAEEFMT--ASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITR 121 (133)
T ss_dssp -------------------CCTTCBGGGTSE--ECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred -------------------CCcccCHHHHcC--CCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHH
Confidence 012346888887 6789999999999999999999999999999 899999999999985
Q ss_pred HHHh
Q 023512 198 RVIS 201 (281)
Q Consensus 198 ~~~~ 201 (281)
.+..
T Consensus 122 ~~~~ 125 (133)
T 2ef7_A 122 AIDD 125 (133)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 51
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.78 E-value=2.5e-19 Score=137.46 Aligned_cols=120 Identities=15% Similarity=0.202 Sum_probs=105.5
Q ss_pred hhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-C-CeeeEeeeHHHHHHHHHhcCCCCccccccccc
Q 023512 138 RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVM 215 (281)
Q Consensus 138 ~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~-~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~ 215 (281)
.+...++.++|++..++.++++++++.++++.|.+++++++||++ + ++++|+||.+|+++ ..... ...++.++|
T Consensus 34 ~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~-~~~~~---~~~~v~~im 109 (156)
T 3oi8_A 34 DFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLK-YMFNP---EQFHLKSIL 109 (156)
T ss_dssp HHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGG-GSSCG---GGCCHHHHC
T ss_pred ccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH-HHHcC---CcccHHHHc
Confidence 356778999998545799999999999999999999999999999 5 59999999999973 33221 345899999
Q ss_pred cCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHH
Q 023512 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262 (281)
Q Consensus 216 ~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~ 262 (281)
.+ ++++++++++.++++.|.+++.+.+||+|++|+++|+||..|++
T Consensus 110 ~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 110 RP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp BC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred CC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 65 89999999999999999999999999999999999999999986
No 52
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.78 E-value=1.1e-18 Score=140.68 Aligned_cols=161 Identities=15% Similarity=0.085 Sum_probs=104.2
Q ss_pred cccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHh
Q 023512 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (281)
Q Consensus 40 ~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d-~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (281)
..+++++|.++++++++++++.+|+++|.+++++++||+| +++++|+++..|+...
T Consensus 12 ~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~----------------------- 68 (213)
T 1vr9_A 12 HMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDL----------------------- 68 (213)
T ss_dssp -CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTS-----------------------
T ss_pred ccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhh-----------------------
Confidence 5689999999999999999999999999999999999998 5999999999998532
Q ss_pred hhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHH
Q 023512 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (281)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~ 197 (281)
....++.++|. +++.++++++++.++++.|.+++++++||++ +|+++|+||.+|+++
T Consensus 69 --------------------~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~ 126 (213)
T 1vr9_A 69 --------------------DLDSSVFNKVS--LPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLE 126 (213)
T ss_dssp --------------------CTTSBSGGGCB--CTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHH
T ss_pred --------------------cCCCcHHHHcc--CCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHH
Confidence 11235889998 6789999999999999999999999999999 699999999999985
Q ss_pred HHHhcCCCCccccccccccCC-CeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCc
Q 023512 198 RVISQNLPADSTLVEKVMTPN-PECATIDTPIVDALHIMHDGKFLHLPVVDRDGD 251 (281)
Q Consensus 198 ~~~~~~~~~~~~~v~~~~~~~-~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~ 251 (281)
.+..... ..+.+.+- +.+.....++.++.+.|.+++.+.++|++.+|.
T Consensus 127 ~~~~~~~------~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~~ 175 (213)
T 1vr9_A 127 ALIEALA------MDVPGIRFSVLLEDKPGELRKVVDALALSNINILSVITTRSG 175 (213)
T ss_dssp HHHHSCC------------------------------------------------
T ss_pred HHHHHhc------CCCCcEEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEEEecC
Confidence 5543221 12222211 111233445999999999999999999875543
No 53
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.78 E-value=1.7e-18 Score=128.18 Aligned_cols=121 Identities=11% Similarity=0.159 Sum_probs=105.0
Q ss_pred CcccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHh
Q 023512 39 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (281)
Q Consensus 39 ~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (281)
.+.+++++|.+++.++++++++.+|++.|.+++++.+||+++++++|+++..|+++....
T Consensus 3 ~s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~-------------------- 62 (128)
T 3gby_A 3 ASVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKG-------------------- 62 (128)
T ss_dssp TTCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHTTCSS--------------------
T ss_pred cceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHHHHHhh--------------------
Confidence 467999999999999999999999999999999999999999999999999999743100
Q ss_pred hhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHH
Q 023512 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (281)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~ 197 (281)
+ .....++.++|. +++.++++++++.++++.|.+++.+++||+| +|+++|++|..|+++
T Consensus 63 ---~---------------~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~ 122 (128)
T 3gby_A 63 ---W---------------PTVKEKLGEELL--ETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILG 122 (128)
T ss_dssp ---S---------------CCTTCBCCGGGC--BCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHH
T ss_pred ---C---------------CcccCcHHHHcc--CCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHH
Confidence 0 001245888887 7789999999999999999999999999998 899999999999984
Q ss_pred HH
Q 023512 198 RV 199 (281)
Q Consensus 198 ~~ 199 (281)
.+
T Consensus 123 ~l 124 (128)
T 3gby_A 123 FL 124 (128)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 54
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.78 E-value=2e-18 Score=126.61 Aligned_cols=116 Identities=22% Similarity=0.325 Sum_probs=102.7
Q ss_pred ccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhh
Q 023512 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (281)
Q Consensus 41 ~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d-~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (281)
++++++|.+++.++++++++.+|++.|.+++++.+||++ +|+++|+++..|++.....
T Consensus 1 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~--------------------- 59 (122)
T 3kpb_A 1 TLVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--------------------- 59 (122)
T ss_dssp CBHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHT---------------------
T ss_pred CchHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHh---------------------
Confidence 478999999999999999999999999999999999999 5999999999999765211
Q ss_pred hhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHH
Q 023512 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR 198 (281)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~ 198 (281)
...++.++|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|..|+++.
T Consensus 60 --------------------~~~~v~~~~~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~ 117 (122)
T 3kpb_A 60 --------------------NKKTIEEIMT--RNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRL 117 (122)
T ss_dssp --------------------TCCBGGGTSB--SSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred --------------------cccCHHHHhc--CCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHH
Confidence 1225888887 6789999999999999999999999999999 6999999999999844
Q ss_pred H
Q 023512 199 V 199 (281)
Q Consensus 199 ~ 199 (281)
+
T Consensus 118 l 118 (122)
T 3kpb_A 118 F 118 (122)
T ss_dssp H
T ss_pred h
Confidence 3
No 55
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.78 E-value=1.5e-18 Score=133.11 Aligned_cols=125 Identities=19% Similarity=0.222 Sum_probs=104.2
Q ss_pred cccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhh
Q 023512 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (281)
Q Consensus 40 ~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (281)
..+++++|.+ +++++++++|+.+|+++|.+++++++||+|+ ++++|+++..|++.+......
T Consensus 14 ~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~--------------- 78 (156)
T 3k6e_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDL--------------- 78 (156)
T ss_dssp HTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTC---------------
T ss_pred hccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhccc---------------
Confidence 4578999985 7899999999999999999999999999986 999999999999876432100
Q ss_pred HhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHH
Q 023512 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (281)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di 195 (281)
........++.++|. +++.++++++++.++++.|.++++ +||+| +|+++|+||.+|+
T Consensus 79 ------------------~~~~~~~~~v~~im~--~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~~Di 136 (156)
T 3k6e_A 79 ------------------SQEIMADTDIVHMTK--TDVAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITRKSI 136 (156)
T ss_dssp ------------------CHHHHTTSBGGGTCB--CSCCCBCTTCCHHHHHHHTTTSSE--EEEECTTSBEEEEEEHHHH
T ss_pred ------------------ccccccccCHHHhhc--CCceecccccHHHHHHHHHHHcCC--eEEEecCCEEEEEEEHHHH
Confidence 011234557889998 889999999999999999987764 89998 8999999999999
Q ss_pred HHHHHh
Q 023512 196 LMRVIS 201 (281)
Q Consensus 196 ~~~~~~ 201 (281)
++++..
T Consensus 137 l~~~~~ 142 (156)
T 3k6e_A 137 LKAVNA 142 (156)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 966543
No 56
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.78 E-value=1.5e-18 Score=132.52 Aligned_cols=115 Identities=17% Similarity=0.199 Sum_probs=101.0
Q ss_pred CceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCcccccccccc------CCCeeeeC
Q 023512 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMT------PNPECATI 224 (281)
Q Consensus 152 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~------~~~~~v~~ 224 (281)
+++.++++++++.+|++.|.+++.+++||++ +|+++|+||.+|+++.+..........++.++|. +++.++.+
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~ 108 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYL 108 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGGTCCHHHHTCSEECT
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhhhhcchHHHHHhhhhcccCCCeEECC
Confidence 4588899999999999999999999999999 8999999999999854443322223457899996 78899999
Q ss_pred CCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhh
Q 023512 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (281)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~ 266 (281)
++++.++++.|.+++.+++||+|++|+++|+||..||+++..
T Consensus 109 ~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 109 HETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred CCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 999999999999999999999998899999999999998754
No 57
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.78 E-value=2e-18 Score=132.32 Aligned_cols=127 Identities=16% Similarity=0.188 Sum_probs=107.8
Q ss_pred hcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcC-----CCCcccccc
Q 023512 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-----LPADSTLVE 212 (281)
Q Consensus 139 ~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~-----~~~~~~~v~ 212 (281)
+...++.++|.+..++.++++++++.+|++.|.+++++++||++ +|+++|+||..|+++ ..... ......++.
T Consensus 8 l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~-~~~~~~~~~~~~~~~~~v~ 86 (157)
T 2emq_A 8 FMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMD-AILGLERIEFERLETMKVE 86 (157)
T ss_dssp --CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHH-HSBCSSSBCGGGGGTCBGG
T ss_pred HhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHH-HHhcccccchHHhcCCcHH
Confidence 45567899997333899999999999999999999999999999 899999999999974 43321 112345899
Q ss_pred ccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 213 ~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
++|.++++++++++++.++++.|.++++ +||+|++|+++|+||.+||+++....
T Consensus 87 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~ 140 (157)
T 2emq_A 87 EVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQ 140 (157)
T ss_dssp GTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHT
T ss_pred HHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 9999999999999999999999999987 99999889999999999999886543
No 58
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.78 E-value=3.2e-19 Score=139.83 Aligned_cols=126 Identities=21% Similarity=0.339 Sum_probs=106.9
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcC------------------
Q 023512 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN------------------ 203 (281)
Q Consensus 143 ~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~------------------ 203 (281)
++.++|.+..++.++++++++.+|++.|.+++++++||++ +|+++|+||.+|+++......
T Consensus 5 ~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (180)
T 3sl7_A 5 TVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKT 84 (180)
T ss_dssp BHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCCS
T ss_pred eHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhhh
Confidence 5778887433799999999999999999999999999999 899999999999973211100
Q ss_pred --------CCCccccccccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 204 --------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 204 --------~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
......++.++|.++++++++++++.++++.|.+++.+++||+|++|+++|+||.+||+++....
T Consensus 85 ~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~ 157 (180)
T 3sl7_A 85 FNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQI 157 (180)
T ss_dssp HHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred hHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 01224579999999999999999999999999999999999999999999999999999986553
No 59
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=3.9e-18 Score=131.98 Aligned_cols=130 Identities=18% Similarity=0.149 Sum_probs=110.7
Q ss_pred hcCCCCcccccccccC---CCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhh
Q 023512 34 RELNLEETPVSKVMTR---NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKA 109 (281)
Q Consensus 34 ~~~~~~~~~v~dim~~---~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~ 109 (281)
....+..++|+++|.+ +++++++++++.+|+++|.+++++.+||+|+ |+++|+|+..|+++......
T Consensus 17 ~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~--------- 87 (165)
T 3fhm_A 17 LYFQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQG--------- 87 (165)
T ss_dssp CCCSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHG---------
T ss_pred hhHhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcC---------
Confidence 3446778899999996 6999999999999999999999999999995 89999999999987543210
Q ss_pred HHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEe
Q 023512 110 IAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGI 189 (281)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Gi 189 (281)
......++.++|. +++.++++++++.++++.|.+++.+++||+++|+++|+
T Consensus 88 ---------------------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~~~Gi 138 (165)
T 3fhm_A 88 ---------------------------AASLQQSVSVAMT--KNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGI 138 (165)
T ss_dssp ---------------------------GGGGTSBGGGTSB--SSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEE
T ss_pred ---------------------------CccccCCHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEE
Confidence 0123456888887 77899999999999999999999999999999999999
Q ss_pred eeHHHHHHHHHh
Q 023512 190 LTSKDILMRVIS 201 (281)
Q Consensus 190 vt~~di~~~~~~ 201 (281)
||..|+++.+..
T Consensus 139 it~~dil~~~~~ 150 (165)
T 3fhm_A 139 ISIGDVVKARIG 150 (165)
T ss_dssp EEHHHHHHHTTC
T ss_pred EEHHHHHHHHHH
Confidence 999999854443
No 60
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.78 E-value=1.1e-18 Score=129.43 Aligned_cols=119 Identities=16% Similarity=0.236 Sum_probs=102.1
Q ss_pred Cccccccccc--CCCeEecCCchHHHHHHHhHhCCCcEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHH
Q 023512 39 EETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (281)
Q Consensus 39 ~~~~v~dim~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~--~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (281)
.+.+++++|+ ++++++++++++.+|++.|.+++++++||+++ ++++|+++..|++....
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~----------------- 65 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML----------------- 65 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT-----------------
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc-----------------
Confidence 4679999999 67899999999999999999999999999985 89999999999865310
Q ss_pred hhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHH
Q 023512 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (281)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~ 193 (281)
....++.++|. ++.++++++++.++++.|.+++.+.+||+| +|+++|+||..
T Consensus 66 ------------------------~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~ 118 (129)
T 3jtf_A 66 ------------------------EPALDIRSLVR---PAVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTME 118 (129)
T ss_dssp ------------------------CTTSCGGGGCB---CCCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHH
T ss_pred ------------------------cCCcCHHHHhC---CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHH
Confidence 01235778884 378999999999999999999999999999 69999999999
Q ss_pred HHHHHHHh
Q 023512 194 DILMRVIS 201 (281)
Q Consensus 194 di~~~~~~ 201 (281)
|+++.++.
T Consensus 119 Dil~~l~g 126 (129)
T 3jtf_A 119 DVLEQIVG 126 (129)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhC
Confidence 99976665
No 61
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.77 E-value=4.4e-18 Score=131.00 Aligned_cols=130 Identities=20% Similarity=0.309 Sum_probs=106.7
Q ss_pred cccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHh
Q 023512 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (281)
Q Consensus 40 ~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (281)
..+|+++|+++++++++++++.+|+++|.+++++.+||+|+ |+++|+|+..|++...........
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~-------------- 69 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSA-------------- 69 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC-----------------
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccc--------------
Confidence 56899999999999999999999999999999999999985 999999999999876433210000
Q ss_pred hhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHH
Q 023512 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 198 (281)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~ 198 (281)
.........++.++|. +++.++++++++.++++.|.+++.+++||+++|+++|+||..|+++.
T Consensus 70 ---------------~~~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGiit~~dil~~ 132 (160)
T 2o16_A 70 ---------------QGDSLAFETPLFEVMH--TDVTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGIITDSDFVTI 132 (160)
T ss_dssp ---------------------CCCBHHHHSC--SCEEEBCTTSBHHHHHHHHHHTTCSCEEEEETTEEEEEECHHHHHHH
T ss_pred ---------------cccchhcccCHHHHhc--CCCeEECCCCCHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHH
Confidence 0001123456788887 68999999999999999999999999999999999999999999854
Q ss_pred HH
Q 023512 199 VI 200 (281)
Q Consensus 199 ~~ 200 (281)
+.
T Consensus 133 ~~ 134 (160)
T 2o16_A 133 AI 134 (160)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 62
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.77 E-value=5.8e-18 Score=132.01 Aligned_cols=142 Identities=15% Similarity=0.178 Sum_probs=113.3
Q ss_pred CcEEEEEehHHHHHHHHHhcCCCCcccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEeeC--CeEEEEEehHH
Q 023512 16 ALLCGILTDKDIATRVIARELNLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAK 91 (281)
Q Consensus 16 ~~~~Gi~t~~d~~~~~~~~~~~~~~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~--~~~vGvi~~~d 91 (281)
+.--|.++..+- .++.+...+.+.+|+++|++ +++++++++++.+|++.|.+++++++||+++ ++++|+|+..|
T Consensus 13 ~~~~g~l~~~e~--~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~D 90 (173)
T 3ocm_A 13 MPAVPAFGVEER--NMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKD 90 (173)
T ss_dssp -----CCCHHHH--HHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHH
T ss_pred HHhcCCcCHHHH--HHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHH
Confidence 344588886663 44455557788899999974 6899999999999999999999999999974 79999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHH
Q 023512 92 CLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKML 171 (281)
Q Consensus 92 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~ 171 (281)
++...... ...++. ++ .++.++++++++.++++.|.
T Consensus 91 l~~~~~~~----------------------------------------~~~~v~-~~---~~~~~v~~~~~l~~al~~m~ 126 (173)
T 3ocm_A 91 LVADLITE----------------------------------------GRVRRN-RL---RDPIIVHESIGILRLMDTLK 126 (173)
T ss_dssp HHHHHHHH----------------------------------------SSCCGG-GS---BCCCEECGGGCHHHHHHHHH
T ss_pred HHHHHhcC----------------------------------------CcchhH-hc---CCCeEECCCCcHHHHHHHHH
Confidence 98753210 112345 33 56889999999999999999
Q ss_pred HcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcC
Q 023512 172 ELRLSSAVVTV-ENKPRGILTSKDILMRVISQN 203 (281)
Q Consensus 172 ~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~ 203 (281)
+++.+.+||+| +|+++|+||..|++..++...
T Consensus 127 ~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i 159 (173)
T 3ocm_A 127 RSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEF 159 (173)
T ss_dssp HSTTCCEEEECTTCCEEEEECHHHHHHHHHCCC
T ss_pred HcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcC
Confidence 99999999998 899999999999997776543
No 63
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.77 E-value=7.8e-18 Score=134.83 Aligned_cols=120 Identities=16% Similarity=0.235 Sum_probs=108.0
Q ss_pred hcCCCccccccCCCceeEeCCCCcHHHHHHHHHHc---CccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCcccccccc
Q 023512 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL---RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKV 214 (281)
Q Consensus 139 ~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~---~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~ 214 (281)
+...++.++|+ +++.+++++.|+.++++.|.+. +++.+||++ +|+++|+||.+|++. .....+++++
T Consensus 51 ~~~~~v~~iM~--~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~-------~~~~~~v~~i 121 (205)
T 3kxr_A 51 YSENEIGRYTD--HQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFK-------HEPHEPLISL 121 (205)
T ss_dssp SCTTCGGGGCB--CCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTT-------SCTTSBGGGG
T ss_pred CCcchHHhhcc--CceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHh-------CCCcchHHHH
Confidence 35567999998 7899999999999999999986 789999999 899999999999962 1224589999
Q ss_pred ccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 215 ~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
|+++++++++++++.++++.|.+++++.+||+|++|+++|+||..|++.....
T Consensus 122 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 122 LSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVRE 174 (205)
T ss_dssp CCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred hcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988653
No 64
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.77 E-value=5.2e-19 Score=130.86 Aligned_cols=119 Identities=17% Similarity=0.197 Sum_probs=100.2
Q ss_pred cccccccccCC--CeEecCCchHHHHHHHhHhCCCcEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHh
Q 023512 40 ETPVSKVMTRN--PTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (281)
Q Consensus 40 ~~~v~dim~~~--~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~--~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~ 115 (281)
+.+++++|+++ ++++++++++.+|++.|.+++++++||+++ ++++|+++..|+++....
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~----------------- 64 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRS----------------- 64 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGST-----------------
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc-----------------
Confidence 56899999965 999999999999999999999999999985 799999999998653100
Q ss_pred hHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHH
Q 023512 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 194 (281)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~d 194 (281)
.....++.++|. ++.++++++++.++++.|.+++.+.+||+| +|+++|+||..|
T Consensus 65 ----------------------~~~~~~v~~~m~---~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~d 119 (127)
T 3nqr_A 65 ----------------------DAEAFSMDKVLR---TAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIED 119 (127)
T ss_dssp ----------------------TCCCCCHHHHCB---CCCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHH
T ss_pred ----------------------cCCCCCHHHHcC---CCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 012345777774 367899999999999999999999999999 899999999999
Q ss_pred HHHHHH
Q 023512 195 ILMRVI 200 (281)
Q Consensus 195 i~~~~~ 200 (281)
+++.++
T Consensus 120 ll~~l~ 125 (127)
T 3nqr_A 120 ILELIV 125 (127)
T ss_dssp HHHHC-
T ss_pred HHHHHh
Confidence 985543
No 65
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.77 E-value=9e-18 Score=125.39 Aligned_cols=121 Identities=17% Similarity=0.217 Sum_probs=104.4
Q ss_pred ccccccc---CCCeEecCCchHHHHHHHhHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHh
Q 023512 42 PVSKVMT---RNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (281)
Q Consensus 42 ~v~dim~---~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (281)
+++++|+ +++.++++++++.+|++.|.+++++.+||+|+++++|+++..|+++.....
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~------------------- 67 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLL------------------- 67 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGGS-------------------
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHHc-------------------
Confidence 8999999 899999999999999999999999999999999999999999997531110
Q ss_pred hhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHH
Q 023512 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 198 (281)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~ 198 (281)
+ ......++.++|. +++.++++++++.++++.|.+++.+++||+++|+++|+||..|+++.
T Consensus 68 ---~--------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dll~~ 128 (135)
T 2rc3_A 68 ---D--------------KPVKDTQVKEIMT--RQVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKD 128 (135)
T ss_dssp ---S--------------SCGGGSBGGGTSB--CSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHH
T ss_pred ---C--------------CCcccCCHHHhcc--CCCeEECCCCcHHHHHHHHHHhCCCEEEEEeCCEEEEEEEHHHHHHH
Confidence 0 0112346888887 67899999999999999999999999999999999999999999855
Q ss_pred HH
Q 023512 199 VI 200 (281)
Q Consensus 199 ~~ 200 (281)
+.
T Consensus 129 ~~ 130 (135)
T 2rc3_A 129 AI 130 (135)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 66
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.76 E-value=3e-18 Score=127.28 Aligned_cols=121 Identities=9% Similarity=0.143 Sum_probs=99.6
Q ss_pred ccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhh
Q 023512 41 TPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (281)
Q Consensus 41 ~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~--~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (281)
.+++++|++ +++++++++++.+|++.|.+++++++||+++ ++++|+++..|+++.....
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~----------------- 64 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEK----------------- 64 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSS-----------------
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhcc-----------------
Confidence 589999974 6899999999999999999999999999964 8999999999998652110
Q ss_pred HhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHH
Q 023512 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (281)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di 195 (281)
.. ....++.++| .++.++++++++.++++.|.+++.+.+||+| +|+++|++|..|+
T Consensus 65 ------~~--------------~~~~~v~~~m---~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Di 121 (130)
T 3hf7_A 65 ------KE--------------FTKEIMLRAA---DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDI 121 (130)
T ss_dssp ------SC--------------CCHHHHHHHS---BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHH
T ss_pred ------Cc--------------cchhhHHHhc---cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHH
Confidence 00 0001244455 4578899999999999999999999999998 8999999999999
Q ss_pred HHHHHh
Q 023512 196 LMRVIS 201 (281)
Q Consensus 196 ~~~~~~ 201 (281)
++.+++
T Consensus 122 l~~l~g 127 (130)
T 3hf7_A 122 LEEIVG 127 (130)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 976654
No 67
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.76 E-value=2.3e-18 Score=132.40 Aligned_cols=129 Identities=13% Similarity=0.179 Sum_probs=108.9
Q ss_pred hcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCC----CCccccccc
Q 023512 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL----PADSTLVEK 213 (281)
Q Consensus 139 ~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~----~~~~~~v~~ 213 (281)
+...++.++|.+.+++.++++++++.+|++.|.+++++++||++ +|+++|+||..|++..+..... .....++.+
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~ 90 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEE 90 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHH
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHH
Confidence 34567888997323799999999999999999999999999999 7899999999999744432111 023458999
Q ss_pred cccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhchH
Q 023512 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATE 269 (281)
Q Consensus 214 ~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~~ 269 (281)
+|.+++.++.+++++.++++.|.++++ +||+|++|+++|+||.+||+++....+
T Consensus 91 ~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~ 144 (159)
T 1yav_A 91 VMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHI 144 (159)
T ss_dssp HSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC
T ss_pred hcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHH
Confidence 999999999999999999999999986 999998899999999999999876543
No 68
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.76 E-value=9e-18 Score=128.79 Aligned_cols=143 Identities=16% Similarity=0.199 Sum_probs=111.3
Q ss_pred hcCCCCcccccccccCCCeEecCCchHHHHHHHhHhCCCcE-eeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHH
Q 023512 34 RELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH-LPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 112 (281)
Q Consensus 34 ~~~~~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~-~pV~d~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~ 112 (281)
.+..+...+++++|+++++++++++++.+|++.|.+++++. +||+|+++++|+++..|++....... +
T Consensus 9 ~~~~~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~~~~-----------~ 77 (157)
T 1o50_A 9 HHHHMKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSGFHF-----------F 77 (157)
T ss_dssp -CTTCBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHHHHH-----------H
T ss_pred hhhhhccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHhhhH-----------H
Confidence 45677889999999999999999999999999999999999 99999669999999999987543211 0
Q ss_pred HHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeee
Q 023512 113 AVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILT 191 (281)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt 191 (281)
. ... ....+. .........++.++|. + +.++++++++.++++.|.+++.+++||++ +|+++|+||
T Consensus 78 ~------~~~----~~~~~~-~~~~~~~~~~v~~im~--~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit 143 (157)
T 1o50_A 78 G------FIP----KEELIR-SSMKRLIAKNASEIML--D-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLN 143 (157)
T ss_dssp C------CCC------------CCCCCSSCBHHHHCB--C-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEE
T ss_pred h------hhc----cHHHHH-HHHHHHcCCcHHHHcC--C-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEE
Confidence 0 000 000000 0000123456788887 5 89999999999999999999999999999 899999999
Q ss_pred HHHHHHHHHh
Q 023512 192 SKDILMRVIS 201 (281)
Q Consensus 192 ~~di~~~~~~ 201 (281)
..|+++.+..
T Consensus 144 ~~dll~~l~~ 153 (157)
T 1o50_A 144 SLEILLALWK 153 (157)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999855543
No 69
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.76 E-value=1.2e-17 Score=125.60 Aligned_cols=117 Identities=15% Similarity=0.210 Sum_probs=102.1
Q ss_pred cccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC-C--eEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhh
Q 023512 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-G--EVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (281)
Q Consensus 40 ~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~--~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (281)
..+++++|.+++.++++++++.+|++.|.+++++.+||+|+ + +++|+++..|++......
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~----------------- 66 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQR----------------- 66 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTT-----------------
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcC-----------------
Confidence 46899999999999999999999999999999999999996 6 999999999997642110
Q ss_pred HhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHH
Q 023512 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (281)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di 195 (281)
.....++.++|. +++.+++++ ++.++++.|.+++.+++||++ +|+++|+||..|+
T Consensus 67 ---------------------~~~~~~v~~~m~--~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dl 122 (141)
T 2rih_A 67 ---------------------LDLDGPAMPIAN--SPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDL 122 (141)
T ss_dssp ---------------------CCTTSBSGGGCB--CCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred ---------------------CCCCCCHHHHcC--CCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHH
Confidence 011346888887 689999999 999999999999999999999 8999999999999
Q ss_pred HH
Q 023512 196 LM 197 (281)
Q Consensus 196 ~~ 197 (281)
++
T Consensus 123 l~ 124 (141)
T 2rih_A 123 CF 124 (141)
T ss_dssp HS
T ss_pred HH
Confidence 74
No 70
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.76 E-value=1.1e-17 Score=128.32 Aligned_cols=137 Identities=17% Similarity=0.234 Sum_probs=106.3
Q ss_pred cccccccc------CCCeEecCCchHHHHHHHhHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHH
Q 023512 41 TPVSKVMT------RNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (281)
Q Consensus 41 ~~v~dim~------~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (281)
.+|+|+|. +++.++++++++.+|+++|.+++++.+||.++++++|+++..|+++.....
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~--------------- 71 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQ--------------- 71 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGGG---------------
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHhc---------------
Confidence 47999998 456999999999999999999999999997779999999999997652110
Q ss_pred hhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHH
Q 023512 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKD 194 (281)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~d 194 (281)
+ ......++.++|. +++.++++++++.++++.|.+++.+++||+++|+++|+||..|
T Consensus 72 -------~--------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~d 128 (157)
T 4fry_A 72 -------E--------------RSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGGKLIGLISIGD 128 (157)
T ss_dssp -------T--------------CCSSSCBHHHHSB--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHH
T ss_pred -------c--------------CCccccCHHHHcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHH
Confidence 0 0012346778887 6789999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcccccccccc
Q 023512 195 ILMRVISQNLPADSTLVEKVMT 216 (281)
Q Consensus 195 i~~~~~~~~~~~~~~~v~~~~~ 216 (281)
+++.+...... ....+++++.
T Consensus 129 il~~l~~~~~~-~~~~~~~~i~ 149 (157)
T 4fry_A 129 LVKSVIADQQF-TISQLEHYIH 149 (157)
T ss_dssp HHHHHHTTCCC-CCC-------
T ss_pred HHHHHHHHHHh-hHHHHHhhcc
Confidence 99666554332 2224455544
No 71
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.75 E-value=3.3e-17 Score=122.70 Aligned_cols=125 Identities=22% Similarity=0.252 Sum_probs=106.6
Q ss_pred CCCcccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHh
Q 023512 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (281)
Q Consensus 37 ~~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d-~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~ 115 (281)
.+...+++++|.++++++++++++.+|++.|.+++++.+||+| +|+++|+++..|+++.....
T Consensus 3 ~l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~---------------- 66 (138)
T 2yzi_A 3 MDMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVP---------------- 66 (138)
T ss_dssp CCTTSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTT----------------
T ss_pred chhhhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhc----------------
Confidence 4667899999999999999999999999999999999999999 59999999999997431100
Q ss_pred hHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHH
Q 023512 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 194 (281)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~d 194 (281)
+ .....++.++|. +++.++++++++.++++.|.+++.+++ |++ +|+++|++|..|
T Consensus 67 ------~---------------~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~d 122 (138)
T 2yzi_A 67 ------G---------------LPYDIPVERIMT--RNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSD 122 (138)
T ss_dssp ------C---------------CCTTSBGGGTCB--CSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHH
T ss_pred ------C---------------CcccCCHHHHhh--CCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHH
Confidence 0 012346888887 679999999999999999999999999 998 999999999999
Q ss_pred HHHHHHh
Q 023512 195 ILMRVIS 201 (281)
Q Consensus 195 i~~~~~~ 201 (281)
+++.+..
T Consensus 123 il~~~~~ 129 (138)
T 2yzi_A 123 LLEASRR 129 (138)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 9855543
No 72
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.75 E-value=5.7e-18 Score=129.38 Aligned_cols=123 Identities=21% Similarity=0.298 Sum_probs=106.1
Q ss_pred CCCcccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEe-eC--CeEEEEEehHHHHHHHHHHHHHHHHhhhhHH
Q 023512 37 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVV-EN--GEVIALLDIAKCLYDAIARMERAAEKGKAIA 111 (281)
Q Consensus 37 ~~~~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~-d~--~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~ 111 (281)
.+.+.+++++|++ +++++++++++.+|++.|.+++++++||+ ++ ++++|+|+..|++......
T Consensus 16 ~l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~------------ 83 (153)
T 3oco_A 16 EMNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID------------ 83 (153)
T ss_dssp HHHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH------------
T ss_pred ccCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC------------
Confidence 4567899999996 89999999999999999999999999999 53 8999999999998653211
Q ss_pred HHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEee
Q 023512 112 AAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGIL 190 (281)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Giv 190 (281)
...++.++| +++.++++++++.++++.|.+++.+.+||++ +|+++|+|
T Consensus 84 ----------------------------~~~~v~~~m---~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGiv 132 (153)
T 3oco_A 84 ----------------------------DKAKISTIM---RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGII 132 (153)
T ss_dssp ----------------------------TTSBGGGTC---BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEE
T ss_pred ----------------------------CCCcHHHHh---CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEe
Confidence 123577888 4688999999999999999999999999999 79999999
Q ss_pred eHHHHHHHHHhc
Q 023512 191 TSKDILMRVISQ 202 (281)
Q Consensus 191 t~~di~~~~~~~ 202 (281)
|..|+++.++..
T Consensus 133 t~~dil~~l~~~ 144 (153)
T 3oco_A 133 TDKDVYEELFGN 144 (153)
T ss_dssp CHHHHHHHHHC-
T ss_pred eHHHHHHHHhcc
Confidence 999999766653
No 73
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.75 E-value=7.4e-18 Score=132.66 Aligned_cols=129 Identities=12% Similarity=0.167 Sum_probs=109.0
Q ss_pred hhcCCCccccccCCCc--eeEe--CCCCcHHHHHHHHHHcCccEEEEE--e-CCeeeEeeeHHHHHHHHHhcC-------
Q 023512 138 RMFRPSLSTIIPEKSK--VVTI--SPTDTVLMATKKMLELRLSSAVVT--V-ENKPRGILTSKDILMRVISQN------- 203 (281)
Q Consensus 138 ~~~~~~v~~~m~~~~~--~~~v--~~~~~l~~~~~~~~~~~~~~~~V~--~-~~~~~Givt~~di~~~~~~~~------- 203 (281)
.....++.++|.+..+ +.++ ++++++.+|++.|.+++++++||+ + +|+++|+||..|+++.+....
T Consensus 7 ~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 7 FAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp --CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred hhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 3456678999984322 7788 999999999999999999999999 6 899999999999986554321
Q ss_pred ----------------CCCccccccccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 204 ----------------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 204 ----------------~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
......++.++|.++++++.+++++.++++.|.+++.+++||+| +|+++|+||..||+++...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 11235689999999999999999999999999999999999999 8999999999999998654
No 74
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.75 E-value=2.2e-18 Score=129.08 Aligned_cols=121 Identities=12% Similarity=0.180 Sum_probs=101.2
Q ss_pred ccccccccc--CCCeEecCCchHHHHHHHhHhCCCcEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHh
Q 023512 40 ETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (281)
Q Consensus 40 ~~~v~dim~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~--~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~ 115 (281)
+.+++++|+ ++++++++++++.+|+++|.+++++++||+++ ++++|+|+..|++.+...
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~----------------- 64 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILK----------------- 64 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGS-----------------
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHh-----------------
Confidence 568999999 57899999999999999999999999999985 799999999998753110
Q ss_pred hHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHH
Q 023512 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 194 (281)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~d 194 (281)
......++.++|. + +.++++++++.++++.|.+++.+.+||+| +|+++|+||..|
T Consensus 65 ---------------------~~~~~~~v~~~m~--~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~D 120 (136)
T 3lfr_A 65 ---------------------ADGDSDDVKKLLR--P-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIED 120 (136)
T ss_dssp ---------------------SSGGGCCGGGTCB--C-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHH
T ss_pred ---------------------ccCCCcCHHHHcC--C-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 0112345788885 3 88999999999999999999999999998 899999999999
Q ss_pred HHHHHHh
Q 023512 195 ILMRVIS 201 (281)
Q Consensus 195 i~~~~~~ 201 (281)
+++.++.
T Consensus 121 il~~l~~ 127 (136)
T 3lfr_A 121 VLEQIVG 127 (136)
T ss_dssp HHTTC--
T ss_pred HHHHHhC
Confidence 9854443
No 75
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.74 E-value=8.3e-18 Score=125.97 Aligned_cols=123 Identities=26% Similarity=0.353 Sum_probs=104.3
Q ss_pred CCcccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHH-HHHHHHHHHHHHHhhhhHHHHHh
Q 023512 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKC-LYDAIARMERAAEKGKAIAAAVE 115 (281)
Q Consensus 38 ~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dl-l~~~~~~~~~~~~~~~~~~~~~~ 115 (281)
+.+.+++++|++++.++++++++.+|++.|.+++++++||+|+ ++++|+++..|+ +.....
T Consensus 5 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----------------- 67 (138)
T 2p9m_A 5 LKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRD----------------- 67 (138)
T ss_dssp CTTCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTT-----------------
T ss_pred cccCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhh-----------------
Confidence 4578999999999999999999999999999999999999984 999999999998 654210
Q ss_pred hHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcC-----ccEEEEEe-CCeeeEe
Q 023512 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR-----LSSAVVTV-ENKPRGI 189 (281)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~-----~~~~~V~~-~~~~~Gi 189 (281)
......++.++|. +++.++++++++.++++.|.+++ .+++||++ +|+++|+
T Consensus 68 ---------------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Gi 124 (138)
T 2p9m_A 68 ---------------------KYTLETTIGDVMT--KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGI 124 (138)
T ss_dssp ---------------------CCCSSCBHHHHSC--SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEE
T ss_pred ---------------------cccCCcCHHHHhC--CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEE
Confidence 0112345777786 67899999999999999999999 99999999 9999999
Q ss_pred eeHHHHHHHHH
Q 023512 190 LTSKDILMRVI 200 (281)
Q Consensus 190 vt~~di~~~~~ 200 (281)
+|..|+++.+.
T Consensus 125 it~~dll~~~~ 135 (138)
T 2p9m_A 125 ISDGDIIRTIS 135 (138)
T ss_dssp EEHHHHHHHHH
T ss_pred EEHHHHHHHHH
Confidence 99999985443
No 76
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.74 E-value=3.1e-17 Score=126.04 Aligned_cols=126 Identities=16% Similarity=0.252 Sum_probs=106.1
Q ss_pred CCcccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhh
Q 023512 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (281)
Q Consensus 38 ~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d-~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (281)
+...+++++|++ ++++++++++.+|++.|.+++++.+||+| +++++|+|+..|++......
T Consensus 14 l~~~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----------------- 75 (159)
T 3fv6_A 14 LKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQ----------------- 75 (159)
T ss_dssp HTTCBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSC-----------------
T ss_pred HhhCCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhcc-----------------
Confidence 456799999997 55999999999999999999999999999 59999999999997652110
Q ss_pred HhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CC---eeeEeeeH
Q 023512 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-EN---KPRGILTS 192 (281)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~---~~~Givt~ 192 (281)
......++.++|.+.+++.++++++++.++++.|.+++.+++||++ +| +++|+||.
T Consensus 76 --------------------~~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~ 135 (159)
T 3fv6_A 76 --------------------QELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTK 135 (159)
T ss_dssp --------------------SCTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEH
T ss_pred --------------------CcccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEH
Confidence 0123456888997333789999999999999999999999999999 66 99999999
Q ss_pred HHHHHHHHh
Q 023512 193 KDILMRVIS 201 (281)
Q Consensus 193 ~di~~~~~~ 201 (281)
.|+++.+..
T Consensus 136 ~dil~~l~~ 144 (159)
T 3fv6_A 136 TNMTKILVS 144 (159)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999865543
No 77
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.74 E-value=2.5e-17 Score=131.82 Aligned_cols=124 Identities=10% Similarity=0.038 Sum_probs=108.3
Q ss_pred HhcCCCCcccccccccCCCeEecCCchHHHHHHHhHhC---CCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhh
Q 023512 33 ARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG---KFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGK 108 (281)
Q Consensus 33 ~~~~~~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~---~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~ 108 (281)
.+...+.+.+++++|+++++++++++|+.+|++.|.++ +++.+||+++ ++++|+|+..|++..
T Consensus 46 ~~~l~~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~------------- 112 (205)
T 3kxr_A 46 ELYDQYSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH------------- 112 (205)
T ss_dssp HHHHHSCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS-------------
T ss_pred HHHhCCCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC-------------
Confidence 34446778899999999999999999999999999987 8899999995 999999999998631
Q ss_pred hHHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeee
Q 023512 109 AIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPR 187 (281)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~ 187 (281)
....++.++|. +++.++++++++.++++.|.+++.+.+||+| +|+++
T Consensus 113 ------------------------------~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lv 160 (205)
T 3kxr_A 113 ------------------------------EPHEPLISLLS--EDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELI 160 (205)
T ss_dssp ------------------------------CTTSBGGGGCC--SSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEE
T ss_pred ------------------------------CCcchHHHHhc--CCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEE
Confidence 11245888997 7789999999999999999999999999999 89999
Q ss_pred EeeeHHHHHHHHHh
Q 023512 188 GILTSKDILMRVIS 201 (281)
Q Consensus 188 Givt~~di~~~~~~ 201 (281)
|+||..|++..+..
T Consensus 161 GiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 161 GRVTLRAATALVRE 174 (205)
T ss_dssp EEEEHHHHHHHHHH
T ss_pred EEEEHHHHHHHHHH
Confidence 99999999855543
No 78
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.74 E-value=8.2e-18 Score=127.96 Aligned_cols=133 Identities=17% Similarity=0.210 Sum_probs=105.2
Q ss_pred cccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhh
Q 023512 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (281)
Q Consensus 40 ~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (281)
..+++++|.+ +++++++++++.+|++.|.+++++.+||+|+ ++++|+|+..|++........
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~--------------- 68 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDST--------------- 68 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----C---------------
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCc---------------
Confidence 5689999998 8999999999999999999999999999996 899999999999753211000
Q ss_pred HhhhhCCCCCChhhHHHHH---HHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeH
Q 023512 117 VEKHWGTSISGPNTFIETL---RERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (281)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~ 192 (281)
....... .......++.++|. +++.++++++++.++++.|.+++.+++||++ +|+++|+||.
T Consensus 69 ------------~~~~~~~~~~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~ 134 (152)
T 4gqw_A 69 ------------WKTFNAVQKLLSKTNGKLVGDLMT--PAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITR 134 (152)
T ss_dssp ------------CHHHHHHHTC-----CCBHHHHSE--ESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEH
T ss_pred ------------ccchHHHHHHHHHhccccHHHhcC--CCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEH
Confidence 0000000 01123456888887 6788999999999999999999999999999 8999999999
Q ss_pred HHHHHHHHh
Q 023512 193 KDILMRVIS 201 (281)
Q Consensus 193 ~di~~~~~~ 201 (281)
+|+++.+..
T Consensus 135 ~dil~~~~~ 143 (152)
T 4gqw_A 135 GNVVRAALQ 143 (152)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999965554
No 79
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.74 E-value=2.4e-17 Score=127.11 Aligned_cols=132 Identities=17% Similarity=0.168 Sum_probs=103.3
Q ss_pred CCCcccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEee---CCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHH
Q 023512 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (281)
Q Consensus 37 ~~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d---~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~ 113 (281)
...+.+++++|+++++++++++++.+|+++|.+++++++||+| +++++|+++..|++..........
T Consensus 9 ~~~~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~---------- 78 (164)
T 2pfi_A 9 GSHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSR---------- 78 (164)
T ss_dssp -CCSCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC---------------
T ss_pred cccCCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhcccc----------
Confidence 4567899999999999999999999999999999999999998 389999999999976532110000
Q ss_pred HhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCC----CceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEe
Q 023512 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGI 189 (281)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~----~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Gi 189 (281)
. .....++.++|... ..+.++++++++.++++.|.+++.+++||+++|+++|+
T Consensus 79 -------~----------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~l~Gi 135 (164)
T 2pfi_A 79 -------A----------------PGHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSRGRAVGC 135 (164)
T ss_dssp -------------------------CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEETTEEEEE
T ss_pred -------C----------------CcccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEECCEEEEE
Confidence 0 00112344444311 11788999999999999999999999999999999999
Q ss_pred eeHHHHHHHHHh
Q 023512 190 LTSKDILMRVIS 201 (281)
Q Consensus 190 vt~~di~~~~~~ 201 (281)
||..|+++.+..
T Consensus 136 it~~dil~~~~~ 147 (164)
T 2pfi_A 136 VSWVEMKKAISN 147 (164)
T ss_dssp EEHHHHHHHHHH
T ss_pred EEHHHHHHHHHh
Confidence 999999865554
No 80
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.74 E-value=1.6e-17 Score=126.26 Aligned_cols=128 Identities=16% Similarity=0.190 Sum_probs=105.0
Q ss_pred CCcccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHH
Q 023512 38 LEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (281)
Q Consensus 38 ~~~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d-~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (281)
+.+.+++++|++ +++++++++++.+|++.|.+++++++||+| +|+++|+|+..|++......
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~--------------- 76 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGL--------------- 76 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCS---------------
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhh---------------
Confidence 457899999994 599999999999999999999999999998 59999999999998652100
Q ss_pred hhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHH
Q 023512 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (281)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~ 193 (281)
.... .......++.++|. +++.++++++++.++++.|.++++ +||++ +|+++|+||..
T Consensus 77 ---------~~~~--------~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~ 135 (150)
T 3lqn_A 77 ---------ERIE--------FERLEEMKVEQVMK--QDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRR 135 (150)
T ss_dssp ---------SSBC--------GGGGGGCBGGGTCB--SSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHH
T ss_pred ---------cccc--------hhHHhcCCHHHHhc--CCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHH
Confidence 0000 00123456888997 778999999999999999999886 99999 89999999999
Q ss_pred HHHHHHHh
Q 023512 194 DILMRVIS 201 (281)
Q Consensus 194 di~~~~~~ 201 (281)
|+++.+..
T Consensus 136 dil~~l~~ 143 (150)
T 3lqn_A 136 AILKLLNK 143 (150)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99865544
No 81
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.73 E-value=2e-17 Score=125.73 Aligned_cols=118 Identities=14% Similarity=0.162 Sum_probs=102.0
Q ss_pred cccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhh
Q 023512 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (281)
Q Consensus 40 ~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (281)
.++++++|.+ +++++++++++.+|++.|.+++++.+||+|+ |+++|+|+..|++......
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----------------- 89 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTG----------------- 89 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSS-----------------
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcC-----------------
Confidence 4699999999 9999999999999999999999999999995 8999999999997642100
Q ss_pred HhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHH
Q 023512 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196 (281)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~ 196 (281)
. .....++.++|. +++.++++++++.++++.|.+++.+++||+++++++|+||..|++
T Consensus 90 ------~--------------~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~Giit~~dil 147 (149)
T 3k2v_A 90 ------V--------------DMRDASIADVMT--RGGIRIRPGTLAVDALNLMQSRHITCVLVADGDHLLGVVHMHDLL 147 (149)
T ss_dssp ------S--------------CCTTCBHHHHSE--ESCCEECTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHT
T ss_pred ------C--------------CcccCcHHHHcC--CCCeEECCCCCHHHHHHHHHHcCCCEEEEecCCEEEEEEEHHHhh
Confidence 0 012345777886 678999999999999999999999999999977999999999996
No 82
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.73 E-value=1.5e-18 Score=133.03 Aligned_cols=121 Identities=17% Similarity=0.227 Sum_probs=102.9
Q ss_pred HhcCCCCcccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHHhhh
Q 023512 33 ARELNLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGK 108 (281)
Q Consensus 33 ~~~~~~~~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~--~~~vGvi~~~dll~~~~~~~~~~~~~~~ 108 (281)
.+...+.+.+++++|++ +++++++++++.+|++.|.+++++++||+++ ++++|+++..|++.....
T Consensus 30 ~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~---------- 99 (156)
T 3oi8_A 30 EKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFN---------- 99 (156)
T ss_dssp HHHHHHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSC----------
T ss_pred HHHhccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHc----------
Confidence 33446778899999997 7899999999999999999999999999985 499999999998653100
Q ss_pred hHHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeee
Q 023512 109 AIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPR 187 (281)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~ 187 (281)
. ...++.++|. ++.++++++++.++++.|.+++.+.+||+| +|+++
T Consensus 100 -----------------------------~-~~~~v~~im~---~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~ 146 (156)
T 3oi8_A 100 -----------------------------P-EQFHLKSILR---PAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTS 146 (156)
T ss_dssp -----------------------------G-GGCCHHHHCB---CCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEE
T ss_pred -----------------------------C-CcccHHHHcC---CCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEE
Confidence 0 1235677774 388999999999999999999999999999 89999
Q ss_pred EeeeHHHHH
Q 023512 188 GILTSKDIL 196 (281)
Q Consensus 188 Givt~~di~ 196 (281)
|+||..|++
T Consensus 147 Givt~~Dil 155 (156)
T 3oi8_A 147 GLVTFEDII 155 (156)
T ss_dssp EEEEHHHHC
T ss_pred EEEEHHHhc
Confidence 999999985
No 83
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.73 E-value=2.4e-17 Score=127.07 Aligned_cols=125 Identities=10% Similarity=0.131 Sum_probs=105.4
Q ss_pred cCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe---CCeeeEeeeHHHHHHHHHhcCCC---Cccccccc
Q 023512 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLP---ADSTLVEK 213 (281)
Q Consensus 140 ~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~---~~~~~Givt~~di~~~~~~~~~~---~~~~~v~~ 213 (281)
...++.++|. +++.++++++++.+|++.|.+++++++||++ +|+++|+||..|+++.+...... ....++.+
T Consensus 11 ~~~~v~dim~--~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~ 88 (164)
T 2pfi_A 11 HHVRVEHFMN--HSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQD 88 (164)
T ss_dssp CSCBHHHHCB--CCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHH
T ss_pred cCCCHHHHcC--CCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhh
Confidence 3456888997 6799999999999999999999999999998 48999999999997444322111 12346888
Q ss_pred cccCC------CeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 214 VMTPN------PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 214 ~~~~~------~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
+|.+. +.++.+++++.++++.|.+++.+++||+| +|+++|+||..||+++...
T Consensus 89 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 89 ILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp HHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred hhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 88766 78999999999999999999999999999 7999999999999988654
No 84
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.72 E-value=5.2e-17 Score=130.90 Aligned_cols=118 Identities=17% Similarity=0.198 Sum_probs=105.2
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCC
Q 023512 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (281)
Q Consensus 141 ~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~ 219 (281)
..++.++|. +++.++.+++|+.+|++.|.+++++++||++ +|+++|++|.+|+++ ... ..++.++|.+++
T Consensus 12 ~~~~~~~~~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~-~~~------~~~v~~im~~~~ 82 (213)
T 1vr9_A 12 HMKVKKWVT--QDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLD-LDL------DSSVFNKVSLPD 82 (213)
T ss_dssp -CBGGGGCB--SCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTT-SCT------TSBSGGGCBCTT
T ss_pred ccCHHHhhc--CCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHh-hcC------CCcHHHHccCCC
Confidence 345777887 7899999999999999999999999999999 899999999999962 221 347999999999
Q ss_pred eeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 220 ~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
+++.+++++.++++.|.+++++++||+|++|+++|+||.+|++++...
T Consensus 83 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 83 FFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp CCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 999999999999999999999999999988999999999999987543
No 85
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.72 E-value=8.9e-17 Score=123.06 Aligned_cols=130 Identities=13% Similarity=0.221 Sum_probs=104.8
Q ss_pred CCCcccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHH
Q 023512 37 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (281)
Q Consensus 37 ~~~~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~ 113 (281)
.+...+++++|.+ +++++++++++.+|++.|.+++++++||+|+ |+++|+++..|++......
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~-------------- 72 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGL-------------- 72 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCS--------------
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcc--------------
Confidence 4567899999997 8999999999999999999999999999995 9999999999997642100
Q ss_pred HhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeH
Q 023512 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (281)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~ 192 (281)
.. .. .......++.++|. +++.++++++++.++++.|.++++ +||++ +|+++|+||.
T Consensus 73 ---------~~----~~-----~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~ 130 (157)
T 2emq_A 73 ---------ER----IE-----FERLETMKVEEVMN--RNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTR 130 (157)
T ss_dssp ---------SS----BC-----GGGGGTCBGGGTCB--CCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEH
T ss_pred ---------cc----cc-----hHHhcCCcHHHHhC--CCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEH
Confidence 00 00 01223456888997 679999999999999999999887 99999 7999999999
Q ss_pred HHHHHHHHhc
Q 023512 193 KDILMRVISQ 202 (281)
Q Consensus 193 ~di~~~~~~~ 202 (281)
.|+++.+...
T Consensus 131 ~dil~~~~~~ 140 (157)
T 2emq_A 131 REVLKQLNKQ 140 (157)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9998655543
No 86
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.72 E-value=1.3e-16 Score=130.95 Aligned_cols=160 Identities=15% Similarity=0.141 Sum_probs=108.8
Q ss_pred CCCcccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC---CeEEEEEehHHHHHHHHHHHHHHHHh-------
Q 023512 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN---GEVIALLDIAKCLYDAIARMERAAEK------- 106 (281)
Q Consensus 37 ~~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~---~~~vGvi~~~dll~~~~~~~~~~~~~------- 106 (281)
...+++|+|+|+++++++.+++++.+|.++|.+++++++||+|+ ++++|+|+..|++.............
T Consensus 9 ~~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 9 NKYNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp CCSSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred ccCCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 45578999999999999999999999999999999999999985 58999999999987654432110000
Q ss_pred ----------------hhhHHHHHhhHh-----hh-----hCC-------------------------------------
Q 023512 107 ----------------GKAIAAAVEGVE-----KH-----WGT------------------------------------- 123 (281)
Q Consensus 107 ----------------~~~~~~~~~~~~-----~~-----~~~------------------------------------- 123 (281)
............ +. .+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 000000000000 00 000
Q ss_pred CCCChhhHHHHHHHhhcCCCc--c-ccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHHH
Q 023512 124 SISGPNTFIETLRERMFRPSL--S-TIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRV 199 (281)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~v--~-~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~~ 199 (281)
....+.+. ..+.......++ . .+|. +.++++.+++++.++..+|...|.+++||++.|+++||||++|+++.+
T Consensus 169 ~~i~~~~~-~~~~~~~l~~~Vdl~~~~md--~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~GrLVGIVTrkDl~kai 244 (250)
T 2d4z_A 169 EMLTLEEI-YRWEQREKNVVVNFETCRID--QSPFQLVEGTSLQKTHTLFSLLGLDRAYVTSMGKLVGVVALAEIQAAI 244 (250)
T ss_dssp SCCBHHHH-HHHHHHHTTCBCCTTSSCEE--CCSCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHH
T ss_pred cccChhhh-hhHHHHhcCceecccccccc--CCCeEECCCCcHHHHHHHHHHhCCeEEEEEECCEEEEEEEHHHHHHHH
Confidence 00001111 111111122333 3 3577 779999999999999999999999999999999999999999998444
No 87
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.72 E-value=8e-17 Score=126.67 Aligned_cols=149 Identities=16% Similarity=0.155 Sum_probs=108.5
Q ss_pred CcccccccccCC----CeEe--cCCchHHHHHHHhHhCCCcEeeEe--e-CCeEEEEEehHHHHHHHHHHHHHHHHhhhh
Q 023512 39 EETPVSKVMTRN----PTFV--LSDTLAVEALQKMVQGKFRHLPVV--E-NGEVIALLDIAKCLYDAIARMERAAEKGKA 109 (281)
Q Consensus 39 ~~~~v~dim~~~----~~~v--~~~~~l~~a~~~m~~~~~~~~pV~--d-~~~~vGvi~~~dll~~~~~~~~~~~~~~~~ 109 (281)
.+.+++++|++. ++++ ++++++.+|+++|.+++++.+||+ | +++++|+|+..|++........ ....
T Consensus 9 ~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~----~~~~ 84 (185)
T 2j9l_A 9 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARK----KQDG 84 (185)
T ss_dssp CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHT----SCSC
T ss_pred ccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcc----cCCC
Confidence 478999999987 7888 999999999999999999999999 5 4899999999999876432110 0000
Q ss_pred HHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEe
Q 023512 110 IAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGI 189 (281)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Gi 189 (281)
...+....+... .+.. ........++.++|. +++.++++++++.++++.|.+++.+++||+++|+++|+
T Consensus 85 ---~~~~~~~~~~~~-~~~~-----~~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~g~~vGi 153 (185)
T 2j9l_A 85 ---VVSTSIIYFTEH-SPPL-----PPYTPPTLKLRNILD--LSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGI 153 (185)
T ss_dssp ---CCTTCEEECSSS-CCCC-----CTTCCCCEECGGGEE--SSCCEEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEE
T ss_pred ---ccccceeecccC-Cccc-----ccccccCccHHHhhC--cCCeEeCCCCCHHHHHHHHHhCCCcEEEEEECCEEEEE
Confidence 000000000000 0000 000122346888897 67999999999999999999999999999999999999
Q ss_pred eeHHHHHHHHHhc
Q 023512 190 LTSKDILMRVISQ 202 (281)
Q Consensus 190 vt~~di~~~~~~~ 202 (281)
||..|+++.+...
T Consensus 154 it~~dll~~l~~~ 166 (185)
T 2j9l_A 154 ITKKDVLKHIAQM 166 (185)
T ss_dssp EEHHHHHHHHHHH
T ss_pred EEHHHHHHHHHHh
Confidence 9999998655543
No 88
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.72 E-value=1.6e-17 Score=123.63 Aligned_cols=120 Identities=18% Similarity=0.194 Sum_probs=101.1
Q ss_pred cccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHh
Q 023512 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (281)
Q Consensus 40 ~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d-~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (281)
-.+++++|.+++.++++++++.+|++.|.+++++.+||+| +++++|+++..|++......
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~------------------- 67 (133)
T 1y5h_A 7 MTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAA------------------- 67 (133)
T ss_dssp -CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGG-------------------
T ss_pred hcCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhc-------------------
Confidence 4589999999999999999999999999999999999997 59999999999987321100
Q ss_pred hhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHH
Q 023512 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILM 197 (281)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~ 197 (281)
+. .....++.++|. +++.++++++++.++++.|.+++.+++||+++|+++|++|..|+++
T Consensus 68 ---~~--------------~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~g~~~Giit~~dil~ 127 (133)
T 1y5h_A 68 ---GL--------------DPNTATAGELAR--DSIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIAR 127 (133)
T ss_dssp ---TC--------------CTTTSBHHHHHT--TCCCCEETTCCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHH
T ss_pred ---CC--------------CccccCHHHHhc--CCCEEECCCCCHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHH
Confidence 00 012345677776 6789999999999999999999999999999899999999999984
No 89
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.71 E-value=5.8e-17 Score=124.06 Aligned_cols=128 Identities=19% Similarity=0.207 Sum_probs=105.8
Q ss_pred CCccccccccc--CCCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHH
Q 023512 38 LEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (281)
Q Consensus 38 ~~~~~v~dim~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (281)
+...+++++|+ ++++++++++++.+|+++|.+++++++||+|+ |+++|+|+..|++........
T Consensus 12 l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~------------- 78 (156)
T 3ctu_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDL------------- 78 (156)
T ss_dssp HHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTC-------------
T ss_pred HHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccc-------------
Confidence 34668999999 68999999999999999999999999999985 999999999999876432100
Q ss_pred hhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHH
Q 023512 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (281)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~ 193 (281)
........++.++|. .++.++++++++.++++.|.+++ ++||++ +|+++|+||..
T Consensus 79 --------------------~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~ 134 (156)
T 3ctu_A 79 --------------------SQEIMADTDIVHMTK--TDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRK 134 (156)
T ss_dssp --------------------CHHHHTTSBGGGGCB--CSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETT
T ss_pred --------------------cccccccCcHHHhcc--CCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHH
Confidence 001223456889997 67899999999999999999876 699999 89999999999
Q ss_pred HHHHHHHhc
Q 023512 194 DILMRVISQ 202 (281)
Q Consensus 194 di~~~~~~~ 202 (281)
|+++.+...
T Consensus 135 dil~~l~~~ 143 (156)
T 3ctu_A 135 SILKAVNAL 143 (156)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998655443
No 90
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.71 E-value=9.9e-17 Score=120.83 Aligned_cols=127 Identities=17% Similarity=0.254 Sum_probs=101.1
Q ss_pred Ccccccc---cccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHH
Q 023512 39 EETPVSK---VMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (281)
Q Consensus 39 ~~~~v~d---im~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (281)
.+.++++ +|.++++++++++++.+|++.|.+++++.+||+|+ ++++|+++..|++........
T Consensus 6 ~~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~------------- 72 (144)
T 2nyc_A 6 LKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIY------------- 72 (144)
T ss_dssp GGSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC---------------
T ss_pred hhcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhccccc-------------
Confidence 4668888 88899999999999999999999999999999984 899999999999764211000
Q ss_pred hhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCC----CceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEe
Q 023512 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGI 189 (281)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~----~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Gi 189 (281)
.....++.++|.+. .++.++++++++.++++.|.+++.+++||++ +|+++|+
T Consensus 73 -----------------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Gi 129 (144)
T 2nyc_A 73 -----------------------NDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGV 129 (144)
T ss_dssp -------------------------CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEE
T ss_pred -----------------------ccCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEE
Confidence 01122355555421 1688999999999999999999999999999 8999999
Q ss_pred eeHHHHHHHHHh
Q 023512 190 LTSKDILMRVIS 201 (281)
Q Consensus 190 vt~~di~~~~~~ 201 (281)
||..|+++.+..
T Consensus 130 it~~dil~~l~~ 141 (144)
T 2nyc_A 130 LTLSDILKYILL 141 (144)
T ss_dssp EEHHHHHHHHHH
T ss_pred EEHHHHHHHHHh
Confidence 999999865543
No 91
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.71 E-value=3.6e-17 Score=128.07 Aligned_cols=150 Identities=16% Similarity=0.202 Sum_probs=108.1
Q ss_pred cccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhh
Q 023512 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (281)
Q Consensus 40 ~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~ 116 (281)
..+++++|.+ +++++++++++.+|+++|.+++++.+||+|+ ++++|+|+..|+++......... ...... .
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~--~~~~~~---~- 76 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQ--NDTNLF---P- 76 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC---------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccC--Cccccc---c-
Confidence 3589999998 8999999999999999999999999999995 89999999999974311110000 000000 0
Q ss_pred HhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHH
Q 023512 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (281)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di 195 (281)
..+..... ..............++.++|. +++.++++++++.++++.|.+++++++||++ +|+++|+||..|+
T Consensus 77 ---~~~~~~~~-~~~~~~~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~di 150 (180)
T 3sl7_A 77 ---DVDSTWKT-FNELQKLISKTYGKVVGDLMT--PSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNV 150 (180)
T ss_dssp -------CCCS-HHHHHHHHHTTTTCBHHHHSE--ESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHH
T ss_pred ---cccchhhh-hHHHHHHHhccccccHHHHhC--CCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHH
Confidence 00000000 111111222334567899997 6788999999999999999999999999999 8999999999999
Q ss_pred HHHHHh
Q 023512 196 LMRVIS 201 (281)
Q Consensus 196 ~~~~~~ 201 (281)
++.+..
T Consensus 151 l~~~~~ 156 (180)
T 3sl7_A 151 VRAALQ 156 (180)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 966654
No 92
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.71 E-value=1.1e-16 Score=125.91 Aligned_cols=123 Identities=20% Similarity=0.190 Sum_probs=103.7
Q ss_pred cCCCCcccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHH
Q 023512 35 ELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (281)
Q Consensus 35 ~~~~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d-~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~ 113 (281)
+..+ ..+++++|.++++++++++++.+|+++|.+++++++||++ +|+++|+++..|++......
T Consensus 4 gg~~-~~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~-------------- 68 (184)
T 1pvm_A 4 GGHM-FMRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPR-------------- 68 (184)
T ss_dssp ---C-CCBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGG--------------
T ss_pred Cccc-ccCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc--------------
Confidence 3344 5899999999999999999999999999999999999998 49999999999997642100
Q ss_pred HhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeH
Q 023512 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (281)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~ 192 (281)
.......++.++|. +++.++++++++.++++.|.+++.+++||++ +|+++|+||.
T Consensus 69 ----------------------~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~ 124 (184)
T 1pvm_A 69 ----------------------NKKPDEVPIRLVMR--KPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTL 124 (184)
T ss_dssp ----------------------CCCGGGSBGGGTSB--SSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEH
T ss_pred ----------------------ccCcccCCHHHHhC--CCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEH
Confidence 00112346888887 6789999999999999999999999999999 6999999999
Q ss_pred HHHH
Q 023512 193 KDIL 196 (281)
Q Consensus 193 ~di~ 196 (281)
.|++
T Consensus 125 ~dll 128 (184)
T 1pvm_A 125 TDLS 128 (184)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 9997
No 93
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.70 E-value=8.5e-17 Score=123.55 Aligned_cols=129 Identities=14% Similarity=0.186 Sum_probs=104.9
Q ss_pred CCCcccccccccC--CCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHH
Q 023512 37 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (281)
Q Consensus 37 ~~~~~~v~dim~~--~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~ 113 (281)
.+...+++++|.+ +++++++++++.+|++.|.+++++.+||+|+ ++++|+++..|++......
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~-------------- 75 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGL-------------- 75 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCS--------------
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhh--------------
Confidence 5667899999998 8999999999999999999999999999985 8999999999997642110
Q ss_pred HhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeH
Q 023512 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (281)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~ 192 (281)
.. . ........++.++|. +++.++++++++.++++.|.++++ +||++ +|+++|+||.
T Consensus 76 ---------~~----~-----~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~ 133 (159)
T 1yav_A 76 ---------ER----I-----EFEKLDQITVEEVML--TDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTR 133 (159)
T ss_dssp ---------SS----B-----CGGGTTTSBHHHHSB--CSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEH
T ss_pred ---------cc----c-----chhhhccCCHHHhcC--CCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEH
Confidence 00 0 000123446788887 678999999999999999998876 99999 8999999999
Q ss_pred HHHHHHHHh
Q 023512 193 KDILMRVIS 201 (281)
Q Consensus 193 ~di~~~~~~ 201 (281)
.|+++.+..
T Consensus 134 ~dil~~~~~ 142 (159)
T 1yav_A 134 RVVLKELNK 142 (159)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999865543
No 94
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.69 E-value=1.3e-16 Score=134.27 Aligned_cols=119 Identities=21% Similarity=0.309 Sum_probs=107.3
Q ss_pred cCCCccccccCCCceeEeCCCCcHHHHHHHHHHc-----CccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccc
Q 023512 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 213 (281)
Q Consensus 140 ~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~-----~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~ 213 (281)
...++.++|+ +++.+++++.++.++++.|.++ +++++||++ +|+++|+||.+|++.. ....++.+
T Consensus 135 ~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~-------~~~~~v~~ 205 (286)
T 2oux_A 135 EDETAGAIMT--TEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN-------DDDTLIAD 205 (286)
T ss_dssp CTTBHHHHCB--SCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS-------CTTSBHHH
T ss_pred ChHHHHHhCC--CCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC-------CCCCcHHH
Confidence 4567889998 7899999999999999999987 788899999 8999999999999631 22458999
Q ss_pred cccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 214 ~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
+|+++++++++++++.++++.|.+++.+++||+|++|+++|+||..|+++....
T Consensus 206 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 206 ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988653
No 95
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.69 E-value=2.5e-16 Score=132.04 Aligned_cols=120 Identities=22% Similarity=0.300 Sum_probs=106.6
Q ss_pred cCCCccccccCCCceeEeCCCCcHHHHHHHHHHc-----CccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccc
Q 023512 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 213 (281)
Q Consensus 140 ~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~-----~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~ 213 (281)
...++.++|+ +++.+++++.++.++++.|.+. ++.++||++ +|+++|+||.+|++.. ....++.+
T Consensus 133 ~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~-------~~~~~v~~ 203 (278)
T 2yvy_A 133 EEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA-------DPRTRVAE 203 (278)
T ss_dssp CTTBGGGTCB--SCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS-------CTTCBSTT
T ss_pred CcchHHhhcC--CCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC-------CCCCcHHH
Confidence 4567899998 6899999999999999999986 789999999 8999999999999731 12458999
Q ss_pred cccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 214 ~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
+|.++++++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.....
T Consensus 204 im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e 258 (278)
T 2yvy_A 204 IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 258 (278)
T ss_dssp TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC---
T ss_pred HhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999986543
No 96
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.69 E-value=2.6e-16 Score=119.95 Aligned_cols=125 Identities=23% Similarity=0.310 Sum_probs=101.6
Q ss_pred CCCcccccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHh
Q 023512 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (281)
Q Consensus 37 ~~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~ 115 (281)
.+.+.+++++ +++.++++++++.+|++.|.+++++.+||+|+ |+++|+++..|++......
T Consensus 19 ~l~~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~---------------- 80 (152)
T 2uv4_A 19 SLEELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEK---------------- 80 (152)
T ss_dssp BHHHHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCS----------------
T ss_pred hHHHccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcch----------------
Confidence 4456788888 78899999999999999999999999999985 9999999999997642110
Q ss_pred hHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCC----CceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEee
Q 023512 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGIL 190 (281)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~----~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Giv 190 (281)
.. .....++.++|.+. .++.++++++++.++++.|.+++.+++||++ +|+++|+|
T Consensus 81 -------~~-------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGii 140 (152)
T 2uv4_A 81 -------TY-------------NNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIV 140 (152)
T ss_dssp -------SC-------------CCTTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEE
T ss_pred -------hh-------------hhhcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEE
Confidence 00 00123466666421 4688999999999999999999999999999 79999999
Q ss_pred eHHHHHHHH
Q 023512 191 TSKDILMRV 199 (281)
Q Consensus 191 t~~di~~~~ 199 (281)
|..|+++.+
T Consensus 141 t~~dil~~l 149 (152)
T 2uv4_A 141 SLSDILQAL 149 (152)
T ss_dssp EHHHHHHHH
T ss_pred EHHHHHHHH
Confidence 999998544
No 97
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.67 E-value=3.2e-16 Score=128.73 Aligned_cols=125 Identities=15% Similarity=0.099 Sum_probs=103.9
Q ss_pred cCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeC---CeeeEeeeHHHHHHHHHhc----CC---C----
Q 023512 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE---NKPRGILTSKDILMRVISQ----NL---P---- 205 (281)
Q Consensus 140 ~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~---~~~~Givt~~di~~~~~~~----~~---~---- 205 (281)
...++.++|+ +++.++.+++++.+|.++|.+++++.+||+++ ++++|+||.+|+++.+... .. +
T Consensus 11 ~~~~v~diMt--~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 11 YNIQVGDIMV--RDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp SSCBTTSSSB--SSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred CCCChHHhcC--CCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 3456899998 78999999999999999999999999999993 6899999999998543211 00 0
Q ss_pred ----------------------C---------------------------------------------------------
Q 023512 206 ----------------------A--------------------------------------------------------- 206 (281)
Q Consensus 206 ----------------------~--------------------------------------------------------- 206 (281)
.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 0
Q ss_pred ---------------ccccc--c-ccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 207 ---------------DSTLV--E-KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 207 ---------------~~~~v--~-~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
...++ . .+|++.|+++.+++++.++..+|...+++++||++ .|+++||||++||++++..
T Consensus 169 ~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 169 EMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp SCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred cccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 01122 2 36889999999999999999999999999999998 7999999999999999764
No 98
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.66 E-value=4.8e-16 Score=130.78 Aligned_cols=122 Identities=14% Similarity=0.221 Sum_probs=106.8
Q ss_pred hcCCCCcccccccccCCCeEecCCchHHHHHHHhHhC-----CCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhh
Q 023512 34 RELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKG 107 (281)
Q Consensus 34 ~~~~~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~-----~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~ 107 (281)
....+.+.+++++|+++++++++++++.+|++.|.++ +++.+||+|+ ++++|+|+..|++..
T Consensus 130 ~ll~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~------------ 197 (286)
T 2oux_A 130 ELLHYEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN------------ 197 (286)
T ss_dssp HHTTSCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS------------
T ss_pred HHhcCChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC------------
Confidence 3447778899999999999999999999999999987 8889999985 999999999998642
Q ss_pred hhHHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCee
Q 023512 108 KAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKP 186 (281)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~ 186 (281)
....++.++|. +++.++++++++.++++.|.+++.+++||++ +|++
T Consensus 198 -------------------------------~~~~~v~~im~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~l 244 (286)
T 2oux_A 198 -------------------------------DDDTLIADILN--ERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHL 244 (286)
T ss_dssp -------------------------------CTTSBHHHHSB--SCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBE
T ss_pred -------------------------------CCCCcHHHHcC--CCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeE
Confidence 01235777886 6789999999999999999999999999999 8999
Q ss_pred eEeeeHHHHHHHHH
Q 023512 187 RGILTSKDILMRVI 200 (281)
Q Consensus 187 ~Givt~~di~~~~~ 200 (281)
+|+||..|++..+.
T Consensus 245 vGiIT~~Dil~~i~ 258 (286)
T 2oux_A 245 LGIVTVDDIIDVID 258 (286)
T ss_dssp EEEEEHHHHHHHHH
T ss_pred EEEEEHHHHHHHHH
Confidence 99999999985544
No 99
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.65 E-value=1.1e-15 Score=128.16 Aligned_cols=121 Identities=20% Similarity=0.212 Sum_probs=105.7
Q ss_pred cCCCCcccccccccCCCeEecCCchHHHHHHHhHhC-----CCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhh
Q 023512 35 ELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGK 108 (281)
Q Consensus 35 ~~~~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~-----~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~ 108 (281)
...+.+.+++++|+++++++++++++.+|++.|.++ +++.+||+++ ++++|+|+..|++..
T Consensus 129 ~l~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~------------- 195 (278)
T 2yvy_A 129 LARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA------------- 195 (278)
T ss_dssp HHHSCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS-------------
T ss_pred HHCCCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC-------------
Confidence 335567899999999999999999999999999987 7899999985 999999999998642
Q ss_pred hHHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeee
Q 023512 109 AIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPR 187 (281)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~ 187 (281)
....++.++|. +++.++++++++.++++.|.+++.+.+||+| +|+++
T Consensus 196 ------------------------------~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lv 243 (278)
T 2yvy_A 196 ------------------------------DPRTRVAEIMN--PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLV 243 (278)
T ss_dssp ------------------------------CTTCBSTTTSB--SSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEE
T ss_pred ------------------------------CCCCcHHHHhC--CCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEE
Confidence 12346888997 6799999999999999999999999999999 89999
Q ss_pred EeeeHHHHHHHHH
Q 023512 188 GILTSKDILMRVI 200 (281)
Q Consensus 188 Givt~~di~~~~~ 200 (281)
|+||..|++..+.
T Consensus 244 GivT~~Dil~~i~ 256 (278)
T 2yvy_A 244 GIVTVDDVLDVLE 256 (278)
T ss_dssp EEEEHHHHHHHC-
T ss_pred EEEEHHHHHHHHH
Confidence 9999999984443
No 100
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.65 E-value=1.2e-16 Score=148.23 Aligned_cols=128 Identities=10% Similarity=-0.028 Sum_probs=106.6
Q ss_pred cCCCccccccCCCceeEeCCCCcHHHHHHHHH-HcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCC------------
Q 023512 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKML-ELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP------------ 205 (281)
Q Consensus 140 ~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~-~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~------------ 205 (281)
...++.++|+|.+++.++++++++.++.+.|. +++++.+||+| +++++|+||.+|+++.+......
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~ 530 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLV 530 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC---------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhccccccccccee
Confidence 34568999987788999999999999999999 79999999999 89999999999997433221000
Q ss_pred ----------------------------------CccccccccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCc
Q 023512 206 ----------------------------------ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGD 251 (281)
Q Consensus 206 ----------------------------------~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~ 251 (281)
....+++++|++++.++++++++.++.+.|.+++.+++||+ ++|+
T Consensus 531 ~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~ 609 (632)
T 3org_A 531 LLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGK 609 (632)
T ss_dssp ----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTE
T ss_pred ccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCE
Confidence 00013778999999999999999999999999999999999 6899
Q ss_pred EEEEEEhhhHHHhhhch
Q 023512 252 VVDVVDVIHITHAAVAT 268 (281)
Q Consensus 252 ~~Gvis~~di~~~~~~~ 268 (281)
++|+||++|++++..+.
T Consensus 610 lvGIVT~~Dll~~~~~~ 626 (632)
T 3org_A 610 LVGIVEREDVAYGYSNS 626 (632)
T ss_dssp EEEEEEGGGTEECCCC-
T ss_pred EEEEEehhhHHHHHhhh
Confidence 99999999999987765
No 101
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.64 E-value=8.5e-16 Score=139.84 Aligned_cols=123 Identities=11% Similarity=0.101 Sum_probs=108.3
Q ss_pred CCCccccccCCCceeEeCCC-CcHHHHHHHHHHcCccEEEEEe--CCeeeEeeeHHHHHHHHHhcCCCCccccccccccC
Q 023512 141 RPSLSTIIPEKSKVVTISPT-DTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217 (281)
Q Consensus 141 ~~~v~~~m~~~~~~~~v~~~-~~l~~~~~~~~~~~~~~~~V~~--~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~ 217 (281)
..++.++|+ +++.++.++ +++.++++.|.+++++++||++ +++++|+||.+|+++.+..... ....+++++|++
T Consensus 383 ~~~V~diM~--~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~-~~~~~V~~im~~ 459 (527)
T 3pc3_A 383 SLAIAELEL--PAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNR-QQSDPAIKALNK 459 (527)
T ss_dssp TSBGGGGCC--CCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCC-CTTSBGGGGEET
T ss_pred CCcHHHhCc--CCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccC-cCCCcHHHHhcC
Confidence 467899998 789999999 9999999999999999999999 7899999999999866665433 235689999999
Q ss_pred CCeeeeCCCCHHHHHHHhHhCCCCeeeEecCC----CcEEEEEEhhhHHHhhhch
Q 023512 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRD----GDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 218 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~----~~~~Gvis~~di~~~~~~~ 268 (281)
+++++++++++.+++++|.++++ +||+|++ |+++|+||..||+++..+.
T Consensus 460 ~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 460 RVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 99999999999999999977664 7999974 8999999999999996654
No 102
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.62 E-value=3.4e-15 Score=133.80 Aligned_cols=120 Identities=22% Similarity=0.300 Sum_probs=108.0
Q ss_pred cCCCccccccCCCceeEeCCCCcHHHHHHHHHHc-----CccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccc
Q 023512 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 213 (281)
Q Consensus 140 ~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~-----~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~ 213 (281)
...++.++|+ +++.+++++.|+.++++.|++. +++++||+| +++++|++|.+|++.. ..+.++++
T Consensus 153 ~~~~v~~iM~--~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~-------~~~~~v~d 223 (473)
T 2zy9_A 153 EEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA-------DPRTRVAE 223 (473)
T ss_dssp CTTBSTTTCB--SCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS-------CTTSBGGG
T ss_pred CCCCHHHhCC--CCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC-------CCCCcHHH
Confidence 4567899998 6899999999999999999986 579999999 8999999999999731 12458999
Q ss_pred cccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 214 ~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
+|+++++++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.....
T Consensus 224 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 224 IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999986554
No 103
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.59 E-value=6.3e-15 Score=134.14 Aligned_cols=124 Identities=12% Similarity=0.201 Sum_probs=105.1
Q ss_pred CCcccccccccCCCeEecCC-chHHHHHHHhHhCCCcEeeEee--CCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHH
Q 023512 38 LEETPVSKVMTRNPTFVLSD-TLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (281)
Q Consensus 38 ~~~~~v~dim~~~~~~v~~~-~~l~~a~~~m~~~~~~~~pV~d--~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (281)
+.+.+|+++|+++++++.++ +++.+|+++|.+++++++||+| +++++|+|+..|+++.....
T Consensus 381 l~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~--------------- 445 (527)
T 3pc3_A 381 WWSLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSM--------------- 445 (527)
T ss_dssp TTTSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHH---------------
T ss_pred ccCCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhc---------------
Confidence 55789999999999999999 9999999999999999999999 59999999999998764321
Q ss_pred hhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeC-----CeeeEe
Q 023512 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE-----NKPRGI 189 (281)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~-----~~~~Gi 189 (281)
......++.++|. +++.++++++++.++++.|.++++ +||+++ |+++|+
T Consensus 446 ----------------------~~~~~~~V~~im~--~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGI 499 (527)
T 3pc3_A 446 ----------------------NRQQSDPAIKALN--KRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKAL 499 (527)
T ss_dssp ----------------------CCCTTSBGGGGEE--TTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEE
T ss_pred ----------------------cCcCCCcHHHHhc--CCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEE
Confidence 0122446899998 789999999999999999977665 688884 899999
Q ss_pred eeHHHHHHHHHhc
Q 023512 190 LTSKDILMRVISQ 202 (281)
Q Consensus 190 vt~~di~~~~~~~ 202 (281)
||..|+++.+...
T Consensus 500 VT~~Dll~~l~~~ 512 (527)
T 3pc3_A 500 ATKLDVTTFIAAG 512 (527)
T ss_dssp EEHHHHHHHHHTC
T ss_pred EEHHHHHHHHHhc
Confidence 9999999555543
No 104
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.57 E-value=1.6e-14 Score=129.42 Aligned_cols=123 Identities=20% Similarity=0.210 Sum_probs=107.5
Q ss_pred hcCCCCcccccccccCCCeEecCCchHHHHHHHhHhC-----CCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhh
Q 023512 34 RELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKG 107 (281)
Q Consensus 34 ~~~~~~~~~v~dim~~~~~~v~~~~~l~~a~~~m~~~-----~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~ 107 (281)
+...+.+.+++++|+++++++++++++.+|++.|.++ +++.+||+|+ ++++|+++.+|++..
T Consensus 148 ~~l~~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~------------ 215 (473)
T 2zy9_A 148 ALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA------------ 215 (473)
T ss_dssp HHHTSCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS------------
T ss_pred HHhcCCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC------------
Confidence 3446678899999999999999999999999999986 5789999985 899999999998642
Q ss_pred hhHHHHHhhHhhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCee
Q 023512 108 KAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKP 186 (281)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~ 186 (281)
....++.++|. +++.++++++++.++++.|.+++...+||+| +|++
T Consensus 216 -------------------------------~~~~~v~dim~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~l 262 (473)
T 2zy9_A 216 -------------------------------DPRTRVAEIMN--PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRL 262 (473)
T ss_dssp -------------------------------CTTSBGGGTSB--SSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBE
T ss_pred -------------------------------CCCCcHHHHhC--CCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEE
Confidence 11236889997 6799999999999999999999999999999 8999
Q ss_pred eEeeeHHHHHHHHHh
Q 023512 187 RGILTSKDILMRVIS 201 (281)
Q Consensus 187 ~Givt~~di~~~~~~ 201 (281)
+|+||..|++..+..
T Consensus 263 vGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 263 VGIVTVDDVLDVLEA 277 (473)
T ss_dssp EEEEEHHHHHHHHHH
T ss_pred EEEEehHhhHHHHHH
Confidence 999999999855443
No 105
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.57 E-value=2.1e-14 Score=129.52 Aligned_cols=115 Identities=25% Similarity=0.308 Sum_probs=103.0
Q ss_pred cccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe---CCeeeEeeeHHHHHHHHHhcCCCCccccccccccC-CCe
Q 023512 145 STIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP-NPE 220 (281)
Q Consensus 145 ~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~---~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~-~~~ 220 (281)
.+.|. .++.++++++|+.++++.|.+++++++||++ +++++|+||.+|++ . ......++.++|++ +++
T Consensus 116 ~~~m~--~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~-~-----~~~~~~~V~~vM~~~~~v 187 (511)
T 3usb_A 116 ESGVI--SDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR-F-----IQDYSIKISDVMTKEQLI 187 (511)
T ss_dssp SSCSS--SSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHT-T-----CCCSSSBHHHHCCCCCCC
T ss_pred ccccc--cCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhh-h-----hccCCCcHHHhcccCCCE
Confidence 34555 6789999999999999999999999999999 57999999999995 2 12235689999997 999
Q ss_pred eeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
+++++.++.++++.|.+++.+.+||+|++|+++|+||..|++++...
T Consensus 188 tv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 188 TAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp CEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999998655
No 106
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.56 E-value=2.4e-15 Score=139.48 Aligned_cols=146 Identities=14% Similarity=0.101 Sum_probs=102.6
Q ss_pred Cccccccccc--CCCeEecCCchHHHHHHHhH-hCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHH
Q 023512 39 EETPVSKVMT--RNPTFVLSDTLAVEALQKMV-QGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (281)
Q Consensus 39 ~~~~v~dim~--~~~~~v~~~~~l~~a~~~m~-~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~ 114 (281)
.+.+++|+|+ +++.++++++++.++.+.|. +++++.+||+|+ ++++|+++.+|+.+............... ....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~-~~~~ 529 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAG-HRTL 529 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC---------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhccccccc-ccce
Confidence 5789999999 89999999999999999999 899999999995 99999999999976533221110000000 0000
Q ss_pred hhHhhhhCCCCCChhhHHHHHHH-------------------h-hcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcC
Q 023512 115 EGVEKHWGTSISGPNTFIETLRE-------------------R-MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR 174 (281)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~-------------------~-~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~ 174 (281)
. .. ....+.+.+.. . ....++.++|+ +++.++++++++.++++.|.+++
T Consensus 530 ~----~~-----~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt--~~pitV~~~~~l~ea~~~M~~~~ 598 (632)
T 3org_A 530 V----LL-----DAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCD--VSPIVVTSYSLVRQLHFLFVMLM 598 (632)
T ss_dssp --------------------------------------------------CCSCC--CCCCEEETTCBHHHHHHHHHHTC
T ss_pred e----cc-----CHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhc--CCCceecCCCcHHHHHHHHHhcC
Confidence 0 00 00000000000 0 11124788998 78899999999999999999999
Q ss_pred ccEEEEEeCCeeeEeeeHHHHH
Q 023512 175 LSSAVVTVENKPRGILTSKDIL 196 (281)
Q Consensus 175 ~~~~~V~~~~~~~Givt~~di~ 196 (281)
.+++||+++|+++|+||.+|++
T Consensus 599 i~~lpVve~G~lvGIVT~~Dll 620 (632)
T 3org_A 599 PSMIYVTERGKLVGIVEREDVA 620 (632)
T ss_dssp CSEEEEEETTEEEEEEEGGGTE
T ss_pred CCEEEEEECCEEEEEEehhhHH
Confidence 9999999999999999999997
No 107
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.56 E-value=4.2e-14 Score=127.52 Aligned_cols=160 Identities=12% Similarity=0.167 Sum_probs=124.5
Q ss_pred cccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEee---CCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHh
Q 023512 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (281)
Q Consensus 42 ~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d---~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (281)
+.++.|.++++++++++|+.+++++|.+++++.+||+| +++++|+|+.+|+...
T Consensus 114 ~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~----------------------- 170 (511)
T 3usb_A 114 RSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI----------------------- 170 (511)
T ss_dssp TSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC-----------------------
T ss_pred ccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh-----------------------
Confidence 34567888999999999999999999999999999998 4799999999998420
Q ss_pred hhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHH
Q 023512 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (281)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~ 197 (281)
.....++.++|++ .++++++++.++.++++.|.+++.+.+||+| +|+++|+||.+|+++
T Consensus 171 -------------------~~~~~~V~~vM~~-~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~ 230 (511)
T 3usb_A 171 -------------------QDYSIKISDVMTK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEK 230 (511)
T ss_dssp -------------------CCSSSBHHHHCCC-CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHH
T ss_pred -------------------ccCCCcHHHhccc-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHH
Confidence 1123457888873 4899999999999999999999999999999 999999999999985
Q ss_pred HHHhcCCCCccccccccccCCCe--eeeCCCCHHHHHHHhHhCCCCeeeEecCCC
Q 023512 198 RVISQNLPADSTLVEKVMTPNPE--CATIDTPIVDALHIMHDGKFLHLPVVDRDG 250 (281)
Q Consensus 198 ~~~~~~~~~~~~~v~~~~~~~~~--~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~ 250 (281)
.+.... ...+.+.+..+ .+.......+..+.+.+.+.+.+.|-..++
T Consensus 231 ~~~~p~------a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g 279 (511)
T 3usb_A 231 VIEFPN------SAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHG 279 (511)
T ss_dssp HHHCTT------CCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCT
T ss_pred hhhccc------chhhhccceeeeeeeeeccchHHHHHHHHhhccceEEeccccc
Confidence 544321 23333333332 333344556667788888999887765554
No 108
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.54 E-value=5e-15 Score=133.09 Aligned_cols=117 Identities=16% Similarity=0.175 Sum_probs=90.9
Q ss_pred ccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCcccccccccc-C-CCe
Q 023512 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMT-P-NPE 220 (281)
Q Consensus 144 v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~-~-~~~ 220 (281)
..++|. .++.++++++++.++++.|.+++++++||++ +++++|+||.+|++ .......++.++|+ + +++
T Consensus 91 ~~~~m~--~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~------~~~~~~~~v~diM~p~~~~v 162 (496)
T 4fxs_A 91 FEAGVV--THPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR------FVTDLTKSVAAVMTPKERLA 162 (496)
T ss_dssp CCC--C--BCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHT------TCCCTTSBGGGTSEEGGGCC
T ss_pred cccccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHh------hcccCCCcHHHHhcCCCCCE
Confidence 456676 7799999999999999999999999999999 89999999999995 12223568999998 4 589
Q ss_pred eeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
+++++.++.++++.|.+++++.+||+|++|+++|+||.+|++++...+
T Consensus 163 tv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~~p 210 (496)
T 4fxs_A 163 TVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAESKP 210 (496)
T ss_dssp EEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CCCT
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhccc
Confidence 999999999999999999999999999999999999999999975543
No 109
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.50 E-value=1.7e-15 Score=136.65 Aligned_cols=167 Identities=15% Similarity=0.102 Sum_probs=25.8
Q ss_pred cccc-ccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC----CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhH
Q 023512 43 VSKV-MTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 117 (281)
Q Consensus 43 v~di-m~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~----~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~ 117 (281)
..++ |.++++++++++|+.+|+++|.+++++++||+|+ ++++|+|+..|++.. .
T Consensus 98 ~~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~--~------------------- 156 (503)
T 1me8_A 98 NFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID--L------------------- 156 (503)
T ss_dssp TTTC----------------------------------------------------------------------------
T ss_pred hcccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--h-------------------
Confidence 3445 9999999999999999999999999999999985 799999999998642 0
Q ss_pred hhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHH
Q 023512 118 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (281)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~ 196 (281)
.....++.++|++..++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|++
T Consensus 157 --------------------~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil 216 (503)
T 1me8_A 157 --------------------TQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYD 216 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------ccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHH
Confidence 001235788887433499999999999999999999999999999 89999999999998
Q ss_pred HHHHhcCCCCccccccccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEE
Q 023512 197 MRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDV 255 (281)
Q Consensus 197 ~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gv 255 (281)
+.+..... . ..+...++. ...+.. ....+..+.|.+.+.+.++|-..+|...|+
T Consensus 217 ~~~~~~~~-~-~d~~~~l~v--~a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~ 270 (503)
T 1me8_A 217 RSQVCHNE-L-VDSQKRYLV--GAGINT-RDFRERVPALVEAGADVLCIDSSDGFSEWQ 270 (503)
T ss_dssp -----CCC-C-BCTTSCBCC--EEEECS-SSHHHHHHHHHHHTCSEEEECCSCCCSHHH
T ss_pred Hhhhcccc-h-hcccccccc--ccccCc-hhHHHHHHHHHhhhccceEEecccCcccch
Confidence 55543221 1 111222221 123344 556667888888898877663334554443
No 110
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.49 E-value=3e-13 Score=122.13 Aligned_cols=115 Identities=22% Similarity=0.323 Sum_probs=103.3
Q ss_pred cccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe---CCeeeEeeeHHHHHHHHHhcCCCCccccccccccC-CCe
Q 023512 145 STIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP-NPE 220 (281)
Q Consensus 145 ~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~---~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~-~~~ 220 (281)
.++|. .++.++++++++.++++.|.+++++++||++ +++++|+||.+|++. . . ....++.++|++ +++
T Consensus 93 ~~im~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~-~-~----~~~~~v~~im~~~~~~ 164 (491)
T 1zfj_A 93 ENGVI--IDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRF-I-S----DYNAPISEHMTSEHLV 164 (491)
T ss_dssp TTTTS--SSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHH-C-S----CSSSBTTTSCCCSCCC
T ss_pred HhcCc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhh-h-c----cCCCcHHHHcCCCCCE
Confidence 56776 6788999999999999999999999999997 789999999999963 2 1 235689999998 899
Q ss_pred eeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhc
Q 023512 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (281)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~ 267 (281)
++++++++.++++.|.+++.+.+||+|++|+++|++|..||++....
T Consensus 165 ~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 165 TAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp CEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999998663
No 111
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.48 E-value=4.9e-14 Score=115.86 Aligned_cols=56 Identities=23% Similarity=0.365 Sum_probs=48.4
Q ss_pred ccccccccc-CCCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHH
Q 023512 40 ETPVSKVMT-RNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYD 95 (281)
Q Consensus 40 ~~~v~dim~-~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~ 95 (281)
..+++++|+ +++.++++++++.+|+++|.+++++++||+|+ |+++|+++..|++.+
T Consensus 184 ~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~ 241 (245)
T 3l2b_A 184 SLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLIST 241 (245)
T ss_dssp GSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC-----
T ss_pred CCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhch
Confidence 457999999 89999999999999999999999999999985 999999999999865
No 112
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.48 E-value=3e-15 Score=134.41 Aligned_cols=117 Identities=21% Similarity=0.240 Sum_probs=2.6
Q ss_pred ccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHHHHhcCCCCcccccccccc-C-CCee
Q 023512 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMT-P-NPEC 221 (281)
Q Consensus 144 v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~-~-~~~~ 221 (281)
+.++|. .++.++++++|+.+++++|.+++++++||+++++++|+||.+|+. .. .....++.++|+ + ++++
T Consensus 90 ~~~~m~--~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~-~~-----~~~~~~V~~vMtp~~~~vt 161 (490)
T 4avf_A 90 HETAIV--RDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLR-VK-----PNAGDTVAAIMTPKDKLVT 161 (490)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred cccCcc--cCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhh-hc-----cccCCcHHHHhccCCCCEE
Confidence 566676 678899999999999999999999999999999999999999994 21 122458999998 4 6999
Q ss_pred eeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 222 v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
+++++++.+++++|.+++++.+||+|++|+++|+||+.|++++..++
T Consensus 162 v~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~p 208 (490)
T 4avf_A 162 AREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTYP 208 (490)
T ss_dssp ---------------------------------------------CT
T ss_pred ECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhccCc
Confidence 99999999999999999999999999999999999999999986544
No 113
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.48 E-value=5.8e-14 Score=126.15 Aligned_cols=114 Identities=18% Similarity=0.269 Sum_probs=88.6
Q ss_pred cccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhhh
Q 023512 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (281)
Q Consensus 42 ~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (281)
+++++|.++++++++++++.+++++|.+++++.+||+|+ ++++|+|+.+|+...
T Consensus 90 ~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~------------------------- 144 (496)
T 4fxs_A 90 IFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV------------------------- 144 (496)
T ss_dssp HCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC-------------------------
T ss_pred ccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc-------------------------
Confidence 557889999999999999999999999999999999995 999999999998411
Q ss_pred hCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHH
Q 023512 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (281)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~ 197 (281)
.....++.++|++.+++.+++++.++.++++.|.+++...+||+| +|+++|+||.+|+++
T Consensus 145 -----------------~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~ 205 (496)
T 4fxs_A 145 -----------------TDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHK 205 (496)
T ss_dssp -----------------CCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC----
T ss_pred -----------------ccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHH
Confidence 112345888997434799999999999999999999999999999 899999999999973
No 114
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.47 E-value=4.2e-15 Score=134.12 Aligned_cols=112 Identities=22% Similarity=0.224 Sum_probs=0.0
Q ss_pred ccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-C---CeeeEeeeHHHHHHHHHhcCCCCccccccccccCC--Cee
Q 023512 148 IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E---NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN--PEC 221 (281)
Q Consensus 148 m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~---~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~--~~~ 221 (281)
|. +++.++++++|+.++++.|.+++++++||++ + ++++|+||.+|++. . ......++.++|++. +++
T Consensus 103 M~--~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~-~----~~~~~~~V~diM~~~~~~~t 175 (503)
T 1me8_A 103 FV--VSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPI-D----LTQTETKVSDMMTPFSKLVT 175 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc--cCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHh-h----hccccCcHHHHhCCCCCCEE
Confidence 65 6789999999999999999999999999999 5 89999999999963 2 122345899999987 999
Q ss_pred eeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhh
Q 023512 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (281)
Q Consensus 222 v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~ 266 (281)
+++++++.++++.|.+++.+.+||+|++|+++|+||.+||+++..
T Consensus 176 v~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 176 AHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ---------------------------------------------
T ss_pred EcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhh
Confidence 999999999999999999999999999999999999999998754
No 115
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.46 E-value=4.9e-15 Score=130.60 Aligned_cols=110 Identities=20% Similarity=0.269 Sum_probs=0.9
Q ss_pred CceeEeCCCCcHHHHHHHHHHcCccEEEEEe----CCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCeeeeCCCC
Q 023512 152 SKVVTISPTDTVLMATKKMLELRLSSAVVTV----ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTP 227 (281)
Q Consensus 152 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~----~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~ 227 (281)
.+++++.|+.|+.+++++|.+++++.+||++ +++++||||.+|+. +. ....+++++|++++++++.+.+
T Consensus 146 ~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~r--f~-----d~~~~V~evMT~~lvt~~~~~~ 218 (556)
T 4af0_A 146 TDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQ--FQ-----DAETPIKSVMTTEVVTGSSPIT 218 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccc--cc-----ccceEhhhhcccceEEecCCCC
Confidence 6699999999999999999999999999998 46899999999993 21 2245899999999999999999
Q ss_pred HHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 228 IVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 228 l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
+++|.++|.++++..+||||++|+++|+||++|+.+...++
T Consensus 219 leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~~p 259 (556)
T 4af0_A 219 LEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYP 259 (556)
T ss_dssp ---------------------------------------CT
T ss_pred HHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhhCC
Confidence 99999999999999999999999999999999999876544
No 116
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.45 E-value=7.6e-15 Score=132.63 Aligned_cols=117 Identities=25% Similarity=0.337 Sum_probs=6.3
Q ss_pred ccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccccccC--CCe
Q 023512 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP--NPE 220 (281)
Q Consensus 144 v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~--~~~ 220 (281)
+.++|. +++.++++++++.++++.|.+++++.+||+| +++++|+||.+|+++ . . ....++.++|++ +++
T Consensus 97 ~~~iM~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~-~-~----~~~~~v~~im~~~~~~~ 168 (494)
T 1vrd_A 97 TENGII--YDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRF-E-K----NLSKKIKDLMTPREKLI 168 (494)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred HhhcCc--cCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHh-h-c----CCCCcHHHHhCCCCCCe
Confidence 466776 6799999999999999999999999999999 789999999999963 2 1 124589999998 999
Q ss_pred eeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 221 ~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
++++++++.++++.|.+++++.+||+|++|+++|+||..|++++...+
T Consensus 169 ~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 169 VAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp ----------------------------------------CHHHHTCT
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 999999999999999999999999999999999999999999986544
No 117
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.44 E-value=3.6e-13 Score=88.12 Aligned_cols=69 Identities=30% Similarity=0.415 Sum_probs=63.1
Q ss_pred eeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCeee
Q 023512 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222 (281)
Q Consensus 154 ~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~~v 222 (281)
++++.+++|+.+|++.|.+++++++||+++|+++|++|.+|+++++........+.+++++|+++++++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 688999999999999999999999999999999999999999878877777777789999999988764
No 118
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.44 E-value=5.9e-14 Score=126.04 Aligned_cols=156 Identities=19% Similarity=0.171 Sum_probs=18.4
Q ss_pred cccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhhhh
Q 023512 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHW 121 (281)
Q Consensus 42 ~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (281)
+++++|.++++++++++++.+|+++|.+++++.+||+|+++++|+|+..|+...
T Consensus 89 ~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~~-------------------------- 142 (490)
T 4avf_A 89 KHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRVK-------------------------- 142 (490)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred ccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhhc--------------------------
Confidence 578889999999999999999999999999999999999999999999998421
Q ss_pred CCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHH
Q 023512 122 GTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVI 200 (281)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~ 200 (281)
.....++.++|++..++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+++...
T Consensus 143 ----------------~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 143 ----------------PNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------cccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 011235788887434799999999999999999999999999999 999999999999984332
Q ss_pred hcCCCCccccccccccC--CCeeeeCCCCHHHHHHHhHhCCCCeeeE
Q 023512 201 SQNLPADSTLVEKVMTP--NPECATIDTPIVDALHIMHDGKFLHLPV 245 (281)
Q Consensus 201 ~~~~~~~~~~v~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~V 245 (281)
.... ..+...+ -...+.......+..+.+.+.+.+.+.+
T Consensus 207 ~p~a------~kd~~grl~v~aavG~~~~~~~~a~~l~~aG~d~I~i 247 (490)
T 4avf_A 207 YPLA------SKDEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVV 247 (490)
T ss_dssp CTTC------CBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred Ccch------hhhccCcceeeeeeccccchHHHHHHHhhcccceEEe
Confidence 1111 1111111 1122333334455556666677776644
No 119
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.43 E-value=3e-12 Score=115.60 Aligned_cols=115 Identities=17% Similarity=0.244 Sum_probs=101.1
Q ss_pred cccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEee--C-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHh
Q 023512 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE--N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (281)
Q Consensus 42 ~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d--~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (281)
.++++|.++++++++++++.+++++|.+++++.+||+| + ++++|+|+.+|++..
T Consensus 91 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~----------------------- 147 (491)
T 1zfj_A 91 RSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFI----------------------- 147 (491)
T ss_dssp HHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHC-----------------------
T ss_pred hHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhh-----------------------
Confidence 35789999999999999999999999999999999998 4 999999999998642
Q ss_pred hhhCCCCCChhhHHHHHHHhhcCCCccccccCCC-ceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHH
Q 023512 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKS-KVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (281)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~-~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~ 196 (281)
.....++.++|+ + ++.++++++++.++++.|.+++.+.+||+| +|+++|++|..|++
T Consensus 148 -------------------~~~~~~v~~im~--~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil 206 (491)
T 1zfj_A 148 -------------------SDYNAPISEHMT--SEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIE 206 (491)
T ss_dssp -------------------SCSSSBTTTSCC--CSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHH
T ss_pred -------------------ccCCCcHHHHcC--CCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHH
Confidence 002345888897 4 789999999999999999999999999999 89999999999998
Q ss_pred HHHH
Q 023512 197 MRVI 200 (281)
Q Consensus 197 ~~~~ 200 (281)
+.+.
T Consensus 207 ~~~~ 210 (491)
T 1zfj_A 207 KVIE 210 (491)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5544
No 120
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.39 E-value=1.5e-13 Score=124.20 Aligned_cols=156 Identities=17% Similarity=0.250 Sum_probs=21.4
Q ss_pred cccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC-CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhhh
Q 023512 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (281)
Q Consensus 42 ~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~-~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (281)
+++++|.++++++++++++.+|+++|.+++++.+||+|+ ++++|+|+..|+....
T Consensus 96 ~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~------------------------ 151 (494)
T 1vrd_A 96 KTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK------------------------ 151 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc------------------------
Confidence 468889999999999999999999999999999999985 8999999999986410
Q ss_pred hCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHH
Q 023512 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRV 199 (281)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~ 199 (281)
....++.++|++.+++.++++++++.++++.|.+++...+||+| +|+++|+||..|+++.+
T Consensus 152 ------------------~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 213 (494)
T 1vrd_A 152 ------------------NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVI 213 (494)
T ss_dssp ---------------------------------------------------------------------------CHHHH
T ss_pred ------------------CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhh
Confidence 01124778887323899999999999999999999999999999 89999999999998554
Q ss_pred HhcCCCCccccccccccCCC--eeeeCCCCHHHHHHHhHhCCCCeeeE
Q 023512 200 ISQNLPADSTLVEKVMTPNP--ECATIDTPIVDALHIMHDGKFLHLPV 245 (281)
Q Consensus 200 ~~~~~~~~~~~v~~~~~~~~--~~v~~~~~l~~~~~~~~~~~~~~l~V 245 (281)
..... .++...+-. ..+.......+....+.+.+.+.+.+
T Consensus 214 ~~~~~------~~D~~~~l~vga~ig~~~~~~~~a~~l~~aGvd~v~i 255 (494)
T 1vrd_A 214 EHPNA------ARDEKGRLLVGAAVGTSPETMERVEKLVKAGVDVIVI 255 (494)
T ss_dssp TCTTC------CBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred ccccc------cccchhhhccccccCcCHhHHHHHHHHHHhCCCEEEE
Confidence 33211 111100000 01223345566777777777776654
No 121
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.35 E-value=2.9e-14 Score=129.35 Aligned_cols=120 Identities=23% Similarity=0.281 Sum_probs=71.9
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeC----CeeeEeeeHHHHHHHHHhcCCCCccccccccccC-
Q 023512 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE----NKPRGILTSKDILMRVISQNLPADSTLVEKVMTP- 217 (281)
Q Consensus 143 ~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~----~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~- 217 (281)
++.++|. +++.++.+++++.++++.|.+++++.+||+|+ ++++|+||.+|+. .... .....++.++|++
T Consensus 109 ~~~~im~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~-~~~~---~~~~~~v~~vm~~~ 182 (514)
T 1jcn_A 109 NFEQGFI--TDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDID-FLAE---KDHTTLLSEVMTPR 182 (514)
T ss_dssp TCCTTSC--SSCCCCCC-----------------CEESCC--------CCEECTTTTC--------------------CC
T ss_pred hhhhccc--cCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHH-hhhh---ccCCCCHHHHhCCC
Confidence 4667787 67889999999999999999999999999984 8999999999995 3211 1224589999998
Q ss_pred -CCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhhch
Q 023512 218 -NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (281)
Q Consensus 218 -~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~~~ 268 (281)
+++++.+++++.++++.|.+++.+.+||+|++|+++|+||++|++++...+
T Consensus 183 ~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 234 (514)
T 1jcn_A 183 IELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRDYP 234 (514)
T ss_dssp BCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCCCT
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhhCc
Confidence 999999999999999999999999999999999999999999999876543
No 122
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.32 E-value=1.6e-13 Score=123.50 Aligned_cols=112 Identities=29% Similarity=0.400 Sum_probs=0.9
Q ss_pred cccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCeeeeC
Q 023512 145 STIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATI 224 (281)
Q Consensus 145 ~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~~v~~ 224 (281)
.+.|. .++.++++++++.++++.|.+++++++||+++++++|+||.+|++. ....++.++|+++++++++
T Consensus 96 ~~~m~--~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~~--------~~~~~v~~im~~~~~~v~~ 165 (486)
T 2cu0_A 96 ERLIV--EDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIAA--------REGKLVKELMTKEVITVPE 165 (486)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred hhccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhcc--------CCCCCHHHHccCCCeEECC
Confidence 44565 6789999999999999999999999999999889999999999963 1245899999988999999
Q ss_pred CCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhh
Q 023512 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (281)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~ 266 (281)
++++.++++.|.+++.+.+||+|++|+++|+||..||++...
T Consensus 166 ~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 166 SIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp -----------------------------------------C
T ss_pred cCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 999999999999999999999999999999999999998854
No 123
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.29 E-value=6e-13 Score=117.44 Aligned_cols=164 Identities=12% Similarity=0.124 Sum_probs=21.4
Q ss_pred cccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC----CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhh
Q 023512 44 SKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (281)
Q Consensus 44 ~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~----~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (281)
+..|..+|+++.|+.|+.+|+++|.+++++.+||+++ ++++|+++.+|+-..
T Consensus 141 e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~------------------------ 196 (556)
T 4af0_A 141 ENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ------------------------ 196 (556)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc------------------------
Confidence 3446778999999999999999999999999999984 689999999997321
Q ss_pred hhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHH
Q 023512 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR 198 (281)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~ 198 (281)
....++.++|+ +++++++++.++.+|.++|.+++...+||+| +++++|+||.+|+.+.
T Consensus 197 -------------------d~~~~V~evMT--~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 197 -------------------DAETPIKSVMT--TEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKN 255 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------ccceEhhhhcc--cceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhh
Confidence 01235889998 6799999999999999999999999999999 9999999999999732
Q ss_pred HHhcCCCCccccccccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEE
Q 023512 199 VISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDV 255 (281)
Q Consensus 199 ~~~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gv 255 (281)
-........+ .-..++- -..+.-...-.+-.+.+.+.+.+.+.|-..+|.-.++
T Consensus 256 ~~~p~A~k~d-~~grL~V--gAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v 309 (556)
T 4af0_A 256 QNYPYASKVP-ESKQLYC--GAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQ 309 (556)
T ss_dssp --CTTCCBCT-TTCCBCC--EEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHH
T ss_pred hhCCcchhcc-hhhceee--EEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHH
Confidence 2211110000 0001111 1112222233556677778888877543355553333
No 124
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.28 E-value=5.4e-13 Score=120.06 Aligned_cols=163 Identities=15% Similarity=0.146 Sum_probs=23.8
Q ss_pred ccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhHhhhhC
Q 023512 43 VSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWG 122 (281)
Q Consensus 43 v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (281)
.++.|.++++++++++++.+++++|.+++++.+||+++++++|+|+.+|++. .
T Consensus 95 ~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~~---~------------------------ 147 (486)
T 2cu0_A 95 AERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIAA---R------------------------ 147 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhcc---C------------------------
Confidence 3567999999999999999999999999999999998899999999999863 0
Q ss_pred CCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHHHHHHh
Q 023512 123 TSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVIS 201 (281)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~~~~~~ 201 (281)
...++.++|. +++.++++++++.++++.|.+++.+.+||+| +|+++|++|.+|+++ ...
T Consensus 148 -----------------~~~~v~~im~--~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~-~~~ 207 (486)
T 2cu0_A 148 -----------------EGKLVKELMT--KEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVA-RKK 207 (486)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -----------------CCCCHHHHcc--CCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHH-hhh
Confidence 0123667776 5788999999999999999999999999999 899999999999974 332
Q ss_pred cCCCCccccccccccCCCeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEE
Q 023512 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVD 257 (281)
Q Consensus 202 ~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis 257 (281)
..... ......++.. ..+..++ .+....+.+.+.+.++|-...|...++++
T Consensus 208 ~~~~~-~~~~g~~~v~--~~~~~~~--~~~a~~l~~~gvd~lvvdta~G~~~~~L~ 258 (486)
T 2cu0_A 208 YKNAV-RDENGELLVA--AAVSPFD--IKRAIELDKAGVDVIVVDTAHAHNLKAIK 258 (486)
T ss_dssp CTTCC-BCTTSCBCCE--EEECTTC--HHHHHHHHHTTCSEEEEECSCCCCHHHHH
T ss_pred ccccc-cccCCceeec--ceechhh--HHHHHHHHHhcCCceEEEecCCcEeehhh
Confidence 11100 0000111111 1223333 56677888899888755444565544443
No 125
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.22 E-value=1.1e-12 Score=119.04 Aligned_cols=157 Identities=9% Similarity=0.090 Sum_probs=85.0
Q ss_pred cccccccCCCeEecCCchHHHHHHHhHhCCCcEeeEeeC----CeEEEEEehHHHHHHHHHHHHHHHHhhhhHHHHHhhH
Q 023512 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 117 (281)
Q Consensus 42 ~v~dim~~~~~~v~~~~~l~~a~~~m~~~~~~~~pV~d~----~~~vGvi~~~dll~~~~~~~~~~~~~~~~~~~~~~~~ 117 (281)
+++++|.++++++++++++.+|+++|.+++++.+||+|+ ++++|+|+..|+.... .
T Consensus 109 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~-~------------------- 168 (514)
T 1jcn_A 109 NFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLA-E------------------- 168 (514)
T ss_dssp TCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC------------------------
T ss_pred hhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhh-h-------------------
Confidence 678999999999999999999999999999999999985 7999999999985420 0
Q ss_pred hhhhCCCCCChhhHHHHHHHhhcCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCccEEEEEe-CCeeeEeeeHHHHH
Q 023512 118 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (281)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~-~~~~~Givt~~di~ 196 (281)
.....++.++|.+..++.++++++++.++++.|.+++...+||+| +|+++|+||.+|++
T Consensus 169 --------------------~~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll 228 (514)
T 1jcn_A 169 --------------------KDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLK 228 (514)
T ss_dssp --------------------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCS
T ss_pred --------------------ccCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHH
Confidence 011235778887322899999999999999999999999999999 89999999999997
Q ss_pred HHHHhcCCCCccccccccccCCC-e--eeeCCCCHHHHHHHhHhCCCCeeeE
Q 023512 197 MRVISQNLPADSTLVEKVMTPNP-E--CATIDTPIVDALHIMHDGKFLHLPV 245 (281)
Q Consensus 197 ~~~~~~~~~~~~~~v~~~~~~~~-~--~v~~~~~l~~~~~~~~~~~~~~l~V 245 (281)
+.+.... ...+ +.... + .+..+....+..+.+.+.+.+.+-+
T Consensus 229 ~~~~~~~------~~~~-~~~rl~vga~vG~~~~~~~~a~~~~~aG~d~v~i 273 (514)
T 1jcn_A 229 KNRDYPL------ASKD-SQKQLLCGAAVGTREDDKYRLDLLTQAGVDVIVL 273 (514)
T ss_dssp SCCCCTT------CCBC-TTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred HHhhCcc------hhcc-cCCceeeeeEecCchhhHHHHHHHHHcCCCEEEe
Confidence 3221110 1111 11111 1 1222334556666677777776644
No 126
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.15 E-value=1.7e-10 Score=75.29 Aligned_cols=69 Identities=32% Similarity=0.434 Sum_probs=58.4
Q ss_pred ceeEeCCCCcHHHHHHHHHHcCccEEEEEeCCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCee
Q 023512 153 KVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221 (281)
Q Consensus 153 ~~~~v~~~~~l~~~~~~~~~~~~~~~~V~~~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~~ 221 (281)
++.++++++++.++++.|.+++++++||+++|+++|++|.+|+++.+..........+++++|++++.+
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~ 69 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVK 69 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTC
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeE
Confidence 367899999999999999999999999999999999999999985555544434466899999887654
No 127
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.09 E-value=2.9e-11 Score=78.95 Aligned_cols=53 Identities=25% Similarity=0.525 Sum_probs=47.7
Q ss_pred CCCCCccEEEEEcCCCcEEEEEehHHHHHHHHHhcCCCCcccccccccCCCeEe
Q 023512 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFV 54 (281)
Q Consensus 1 m~~~~~~~~~v~~~~~~~~Gi~t~~d~~~~~~~~~~~~~~~~v~dim~~~~~~v 54 (281)
|.+++++++||+| +|+++||+|++|+++++...+.++.+.+++++|+++++++
T Consensus 18 M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 18 LSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp HHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred HHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 6789999999998 5899999999999988888888888999999999988764
No 128
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.64 E-value=7.2e-08 Score=62.51 Aligned_cols=47 Identities=15% Similarity=0.135 Sum_probs=43.7
Q ss_pred CeeeeCCCCHHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHHhhh
Q 023512 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (281)
Q Consensus 219 ~~~v~~~~~l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~~~~ 266 (281)
+.++++++++.++++.|.+++++++||+|+ |+++|+||.+|++++..
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 578999999999999999999999999996 99999999999999853
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=72.25 E-value=6.4 Score=25.27 Aligned_cols=28 Identities=14% Similarity=0.278 Sum_probs=21.9
Q ss_pred CCCeeeEecCCCcEEEEEEhhhHHHhhh
Q 023512 239 KFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (281)
Q Consensus 239 ~~~~l~Vv~~~~~~~Gvis~~di~~~~~ 266 (281)
+...+-+++++|+.+|+++..+-++...
T Consensus 12 r~~eVrli~~~Ge~lGv~~~~eAl~~A~ 39 (78)
T 1tif_A 12 RAREVRLIDQNGDQLGIKSKQEALEIAA 39 (78)
T ss_dssp CCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred CCCEEEEECCCCcCCCcccHHHHHHHHH
Confidence 3455778888899999999998887643
No 130
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=68.00 E-value=14 Score=23.72 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=26.5
Q ss_pred CccEEEEEcCCCcEEEEEehHHHHHHHHHhcCCCC
Q 023512 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNLE 39 (281)
Q Consensus 5 ~~~~~~v~~~~~~~~Gi~t~~d~~~~~~~~~~~~~ 39 (281)
+..-+-+++++|.-+|+++.++-++..-..+.++.
T Consensus 12 r~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~LDLV 46 (78)
T 1tif_A 12 RAREVRLIDQNGDQLGIKSKQEALEIAARRNLDLV 46 (78)
T ss_dssp CCSEEEEECTTSCEEEEEEHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEECCCCcCCCcccHHHHHHHHHHcCCCEE
Confidence 34567888989999999999998866555555543
No 131
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=44.69 E-value=14 Score=27.22 Aligned_cols=35 Identities=17% Similarity=0.219 Sum_probs=28.8
Q ss_pred HHHHHHHhHhCCCCeeeEecCCCcEEEEEEhhhHHH
Q 023512 228 IVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263 (281)
Q Consensus 228 l~~~~~~~~~~~~~~l~Vv~~~~~~~Gvis~~di~~ 263 (281)
+.+..+.+.+.+...+.|-. +|+++|+|...|.++
T Consensus 121 ~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD~iK 155 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE-GSRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEecCCC
Confidence 67778888888888887765 799999999998654
No 132
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=38.82 E-value=23 Score=24.74 Aligned_cols=26 Identities=8% Similarity=-0.073 Sum_probs=18.1
Q ss_pred cHHHHHHHHHH-cCccEEEEEe-CCeee
Q 023512 162 TVLMATKKMLE-LRLSSAVVTV-ENKPR 187 (281)
Q Consensus 162 ~l~~~~~~~~~-~~~~~~~V~~-~~~~~ 187 (281)
.+...++.+.+ .+...+.|+| +|..+
T Consensus 36 ~l~~~~~~~~~~~~~~~i~v~d~~G~~~ 63 (131)
T 1p0z_A 36 RIKALIDPMRSFSDATYITVGDASGQRL 63 (131)
T ss_dssp HHHHHHHHHHHHSCCSEEEEEETTSBEE
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCCcEE
Confidence 45666666654 5888999999 77543
No 133
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=37.54 E-value=24 Score=25.12 Aligned_cols=88 Identities=14% Similarity=0.084 Sum_probs=43.8
Q ss_pred CcHHHHHHHHHH-cCccEEEEEe-CCeeeEeeeHHHHHHHHHhcCCCCccccccccccCCCeeeeCCCCHHHHHHHhHhC
Q 023512 161 DTVLMATKKMLE-LRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238 (281)
Q Consensus 161 ~~l~~~~~~~~~-~~~~~~~V~~-~~~~~Givt~~di~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~ 238 (281)
..+...++.+.+ .+...+.|+| +|..+. ..+- ..+...... ......+.....+.....+.. .
T Consensus 41 ~~l~~~~~~~~~~~~~~~i~v~d~~G~~~~---~~~~--~~iG~~~~~--~~~~~al~G~~~~~~~~~~~g--------~ 105 (142)
T 3by8_A 41 SGIQAIAEAVRKRNDLLFIVVTDMQSLRYS---HPEA--QRIGQPFKG--DDILKALNGEENVAINRGFLA--------Q 105 (142)
T ss_dssp CSHHHHHHHHHHHTTCSEEEEEETTCBBSC---CSSG--GGTTSBCCC--GGGTGGGGTCCEEEEECSSSS--------C
T ss_pred HHHHHHHHHHHhhcCCcEEEEECCCCcEEE---CCCh--HHCCCcCCC--CCHHHHhCCCeEEEEecCccE--------E
Confidence 457777777764 5888999999 664321 1110 112222111 123333333222222111100 0
Q ss_pred C-CCeeeEecCCCcEEEEEEhhhHHH
Q 023512 239 K-FLHLPVVDRDGDVVDVVDVIHITH 263 (281)
Q Consensus 239 ~-~~~l~Vv~~~~~~~Gvis~~di~~ 263 (281)
. .-..||.+++|+++|+|+..--+.
T Consensus 106 ~~~~~~PV~~~~g~viGvv~vg~~~~ 131 (142)
T 3by8_A 106 ALRVFTPIYDENHKQIGVVAIGLELS 131 (142)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEHH
T ss_pred EEEEEEeEEcCCCCEEEEEEEeEEHH
Confidence 0 113699887899999997654433
No 134
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=31.51 E-value=37 Score=24.82 Aligned_cols=34 Identities=15% Similarity=0.225 Sum_probs=27.5
Q ss_pred hHHHHHHHhHhCCCcEeeEeeCCeEEEEEehHHH
Q 023512 59 LAVEALQKMVQGKFRHLPVVENGEVIALLDIAKC 92 (281)
Q Consensus 59 ~l~~a~~~m~~~~~~~~pV~d~~~~vGvi~~~dl 92 (281)
.+.+.++.+.+.+-..+.|..+++++|+|...|-
T Consensus 120 ~~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~ 153 (156)
T 1svj_A 120 DVDQKVDQVARQGATPLVVVEGSRVLGVIALKDI 153 (156)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTEEEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCCEEEEEECCEEEEEEEEecC
Confidence 3666777788889888888889999999987653
No 135
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=30.20 E-value=28 Score=26.88 Aligned_cols=25 Identities=20% Similarity=0.149 Sum_probs=18.3
Q ss_pred CCCCeeeEecCCCcEEEEEEhhhHH
Q 023512 238 GKFLHLPVVDRDGDVVDVVDVIHIT 262 (281)
Q Consensus 238 ~~~~~l~Vv~~~~~~~Gvis~~di~ 262 (281)
-+-+.-||+|.+|+++||-+..|=.
T Consensus 124 pGdSGsPVvn~dG~VIGVHt~s~~~ 148 (213)
T 3fan_A 124 CGDSGSPVITEAGELVGVHTGSNKQ 148 (213)
T ss_dssp CCSTTCEEEETTSCEEEEEEC----
T ss_pred CCCCCCccCCCCCcEEEEEeccCCc
Confidence 3666789999999999999877643
No 136
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=27.64 E-value=37 Score=25.00 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=19.3
Q ss_pred HhCCCCeeeEecCCCcEEEEEEh
Q 023512 236 HDGKFLHLPVVDRDGDVVDVVDV 258 (281)
Q Consensus 236 ~~~~~~~l~Vv~~~~~~~Gvis~ 258 (281)
...+.+.-|++|.+|+++||.+.
T Consensus 122 i~pGnSGGPl~n~~G~VVGI~~~ 144 (163)
T 2w5e_A 122 TQDGMSGAPVCDKYCRVLAVHQT 144 (163)
T ss_dssp CSSCCTTCEEECTTSCEEEEEEE
T ss_pred eCCCCchhhEEcCCCEEEEEEcc
Confidence 45567789999999999999864
No 137
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=26.15 E-value=38 Score=26.39 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=17.9
Q ss_pred CCCeeeEecCCCcEEEEEEhh
Q 023512 239 KFLHLPVVDRDGDVVDVVDVI 259 (281)
Q Consensus 239 ~~~~l~Vv~~~~~~~Gvis~~ 259 (281)
+-+.-|++|.+|+++||++..
T Consensus 187 G~SGGPLv~~~G~vVGI~s~~ 207 (231)
T 3tjo_A 187 GNAGGPLVNLDGEVIGINTLK 207 (231)
T ss_dssp TTTTSEEECTTSCEEEEEEEE
T ss_pred CCchhHeecCCCeEEEEEeEE
Confidence 666789999889999999864
No 138
>3fld_A Protein TRAI, DNA helicase I; novel alpha/beta core domain, alternative initiation, ATP- binding, conjugation, DNA-binding, hydrolase; 2.40A {Escherichia coli k-12}
Probab=25.14 E-value=54 Score=23.57 Aligned_cols=70 Identities=11% Similarity=-0.111 Sum_probs=37.0
Q ss_pred cEEEEEcCCCcEEEEEehHHHHHHHHHhcCCCCcccccccccC--CCeEecCC--------chHHHHHHHhHhCCCcEee
Q 023512 7 DALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTR--NPTFVLSD--------TLAVEALQKMVQGKFRHLP 76 (281)
Q Consensus 7 ~~~~v~~~~~~~~Gi~t~~d~~~~~~~~~~~~~~~~v~dim~~--~~~~v~~~--------~~l~~a~~~m~~~~~~~~p 76 (281)
-++||||.+|+-.|+.-..=-... .. ........-.-+++. .+..+..+ +++.+++.+-.++.-+.+.
T Consensus 52 ~alPv~D~NGK~AG~~L~~L~~~~-G~-~~~~~~ge~R~~gte~Aqfa~LQ~SrNGeTllA~dl~~al~~Ar~~P~sGVv 129 (153)
T 3fld_A 52 VALPAFDRNGKSAGIWLNPLTTDD-GN-GLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVV 129 (153)
T ss_dssp EEEEEECTTSCEEEEEEEECEEET-TT-EEECCCSCCEEEECTTCCEEEEEBCSSSEEEEESSHHHHHHHHHHCTTSEEE
T ss_pred ccceeecCCCcccceEEeeeecCC-Cc-cccccCCcceEeecCccceeeeeeccCCcEEEecCHHHHHHHHHhCCCCceE
Confidence 378999999999998643310000 00 000000111222322 33333322 5688888888888877775
Q ss_pred Ee
Q 023512 77 VV 78 (281)
Q Consensus 77 V~ 78 (281)
|-
T Consensus 130 v~ 131 (153)
T 3fld_A 130 VR 131 (153)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 139
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=23.65 E-value=40 Score=26.31 Aligned_cols=22 Identities=9% Similarity=0.119 Sum_probs=18.2
Q ss_pred hCCCCeeeEecCCCcEEEEEEh
Q 023512 237 DGKFLHLPVVDRDGDVVDVVDV 258 (281)
Q Consensus 237 ~~~~~~l~Vv~~~~~~~Gvis~ 258 (281)
..+-+.-|++|.+|+++||++.
T Consensus 172 ~~G~SGGPlv~~~G~vvGI~s~ 193 (237)
T 3lgi_A 172 NHGNSGGALVNSLGELMGINTL 193 (237)
T ss_dssp CTTCTTCEEECTTCCEEEEECC
T ss_pred CCCCchHHeeCCCCeEEEEEee
Confidence 3466678999989999999876
No 140
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=22.62 E-value=49 Score=26.16 Aligned_cols=21 Identities=5% Similarity=0.134 Sum_probs=18.0
Q ss_pred CCCCeeeEecCCCcEEEEEEh
Q 023512 238 GKFLHLPVVDRDGDVVDVVDV 258 (281)
Q Consensus 238 ~~~~~l~Vv~~~~~~~Gvis~ 258 (281)
.+-+.-|++|.+|+++||.|.
T Consensus 184 ~G~SGGPLvn~~G~vVGI~s~ 204 (245)
T 3sti_A 184 RGNSGGALLNLNGELIGINTA 204 (245)
T ss_dssp TTTTTSEEECTTSCEEEEEEC
T ss_pred CCcchhHeecCCCeEEEEEEe
Confidence 466788999989999999875
No 141
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=22.26 E-value=50 Score=25.68 Aligned_cols=22 Identities=27% Similarity=0.209 Sum_probs=18.3
Q ss_pred CCCCeeeEecCCCcEEEEEEhh
Q 023512 238 GKFLHLPVVDRDGDVVDVVDVI 259 (281)
Q Consensus 238 ~~~~~l~Vv~~~~~~~Gvis~~ 259 (281)
.+-+.-|++|.+|+++||++..
T Consensus 180 ~GdSGGPLv~~~G~vvGI~s~~ 201 (237)
T 3k6y_A 180 QGDSGGPLIDLNGQVLGVVFGA 201 (237)
T ss_dssp TTCTTCEEECTTSCEEEEEEEE
T ss_pred CCccHHHEECCCCEEEEEEEee
Confidence 4667789999889999999764
No 142
>3ksh_A Putative uncharacterized protein; FRMSR, free-Met-R-SO, oxidoreductase; 1.50A {Staphylococcus aureus} SCOP: d.110.2.0 PDB: 3ksf_A 3ksi_A 3ksg_A*
Probab=22.02 E-value=67 Score=23.53 Aligned_cols=18 Identities=28% Similarity=0.576 Sum_probs=15.2
Q ss_pred CcEeeEeeCCeEEEEEeh
Q 023512 72 FRHLPVVENGEVIALLDI 89 (281)
Q Consensus 72 ~~~~pV~d~~~~vGvi~~ 89 (281)
.-.+|+..+++++|+++.
T Consensus 115 ei~VPI~~~g~viGVL~i 132 (160)
T 3ksh_A 115 EIVVPIFKDDKIIGVLDI 132 (160)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred eEEEEEEECCEEEEEEEE
Confidence 347899999999999965
No 143
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=21.32 E-value=64 Score=23.07 Aligned_cols=20 Identities=35% Similarity=0.376 Sum_probs=14.9
Q ss_pred eeeEecCCCcEEEEE-EhhhH
Q 023512 242 HLPVVDRDGDVVDVV-DVIHI 261 (281)
Q Consensus 242 ~l~Vv~~~~~~~Gvi-s~~di 261 (281)
+.||.|++|+++|++ ...|+
T Consensus 110 ~~Pi~d~~G~~~G~vev~~Di 130 (151)
T 2qkp_A 110 YAAVRDQAGDFQGVLEYVQDI 130 (151)
T ss_dssp EEEEECTTCCEEEEEEEEEEC
T ss_pred EEEEECCCCCEEEEEEEEEEC
Confidence 568888889999988 34444
No 144
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=21.29 E-value=48 Score=25.23 Aligned_cols=22 Identities=23% Similarity=0.176 Sum_probs=17.8
Q ss_pred CCCCeeeEecCCCcEEEEEEhh
Q 023512 238 GKFLHLPVVDRDGDVVDVVDVI 259 (281)
Q Consensus 238 ~~~~~l~Vv~~~~~~~Gvis~~ 259 (281)
.+-+.-|+++.+|+++||++..
T Consensus 155 ~GdSGGPlv~~~g~lvGI~s~g 176 (210)
T 2as9_A 155 PGNSGSPVLNSNNEVIGVVYGG 176 (210)
T ss_dssp TTCTTCEEECTTSCEEEEECCS
T ss_pred CCCccCcEECCCCeEEEEEecc
Confidence 3566789998789999999864
No 145
>3rfb_A Putative uncharacterized protein; FRMSR, GAF, oxidoreductase, SME; HET: SME; 2.30A {Streptococcus pneumoniae}
Probab=21.09 E-value=71 Score=23.71 Aligned_cols=19 Identities=26% Similarity=0.627 Sum_probs=15.6
Q ss_pred CcEeeEeeCCeEEEEEehH
Q 023512 72 FRHLPVVENGEVIALLDIA 90 (281)
Q Consensus 72 ~~~~pV~d~~~~vGvi~~~ 90 (281)
.-.+|+..+++++|+++..
T Consensus 116 ei~VPI~~~g~viGVL~i~ 134 (171)
T 3rfb_A 116 EIVVPMMKNGQLLGVLDLD 134 (171)
T ss_dssp EEEEEEEETTEEEEEEEEE
T ss_pred eEEEEEEECCEEEEEEEEe
Confidence 3478999999999999653
No 146
>3r8s_H 50S ribosomal protein L9; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_F 1p86_F 1vs8_H 1vs6_H 2aw4_H 2awb_H 2gya_F 2gyc_F 1vt2_H 2i2v_H 2j28_H 2i2t_H* 2qao_H* 2qba_H* 2qbc_H* 2qbe_H 2qbg_H 2qbi_H* 2qbk_H* 2qov_H ...
Probab=20.44 E-value=1e+02 Score=22.29 Aligned_cols=29 Identities=24% Similarity=0.383 Sum_probs=21.0
Q ss_pred CCCcEEEEEehHHHHHHHHHhcCCCCccc
Q 023512 14 SNALLCGILTDKDIATRVIARELNLEETP 42 (281)
Q Consensus 14 ~~~~~~Gi~t~~d~~~~~~~~~~~~~~~~ 42 (281)
++|+++|=+|.+||...+-..+..++...
T Consensus 86 ~~gklfGSVt~~dIa~al~~~g~~idk~~ 114 (149)
T 3r8s_H 86 DEGKLFGSIGTRDIADAVTAAGVEVAKSE 114 (149)
T ss_dssp TTSEEEEEECHHHHHHHHHTTSCCCCTTS
T ss_pred CCCceEcccCHHHHHHHHHHcCCceehhe
Confidence 46899999999999866655555554333
No 147
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=20.03 E-value=61 Score=24.24 Aligned_cols=22 Identities=9% Similarity=0.122 Sum_probs=18.1
Q ss_pred CCCCeeeEecCCCcEEEEEEhh
Q 023512 238 GKFLHLPVVDRDGDVVDVVDVI 259 (281)
Q Consensus 238 ~~~~~l~Vv~~~~~~~Gvis~~ 259 (281)
.+-+.-|+++.+|+++||+|..
T Consensus 151 ~GdSGGPl~~~~g~lvGI~s~g 172 (200)
T 2w7s_A 151 PGNSGSPVLNSKHELIGILYAG 172 (200)
T ss_dssp TTCTTCEEECTTSCEEEEEEEE
T ss_pred CCCccCeEECcCCEEEEEEecc
Confidence 3566789998789999999875
Done!