Query 023516
Match_columns 281
No_of_seqs 144 out of 1452
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 08:10:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023516.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023516hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yox_A Hypothetical protein PA 100.0 1.2E-53 4E-58 385.4 20.1 230 19-249 4-241 (250)
2 1pg6_A Hypothetical protein SP 100.0 2.2E-53 7.5E-58 382.2 17.5 224 20-250 10-242 (243)
3 1pg6_A Hypothetical protein SP 99.9 6.2E-24 2.1E-28 190.6 10.6 126 105-233 23-163 (243)
4 1yox_A Hypothetical protein PA 99.9 2E-22 6.9E-27 181.4 11.1 150 3-169 73-225 (250)
5 1x82_A Glucose-6-phosphate iso 35.5 64 0.0022 26.3 5.7 40 154-193 99-139 (190)
6 2bnm_A Epoxidase; oxidoreducta 31.7 61 0.0021 26.0 5.0 37 154-190 143-179 (198)
7 1vr3_A Acireductone dioxygenas 28.2 99 0.0034 25.8 5.7 37 154-190 107-144 (191)
8 3lwc_A Uncharacterized protein 25.5 1.8E+02 0.0061 21.7 6.4 37 154-194 62-98 (119)
9 1hf2_A MINC, septum site-deter 23.8 1.9E+02 0.0063 24.2 6.7 35 31-65 100-144 (210)
10 1dgw_A Canavalin; duplicated s 22.5 1.5E+02 0.005 23.8 5.6 39 155-193 65-103 (178)
No 1
>1yox_A Hypothetical protein PA3696; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.30A {Pseudomonas aeruginosa} SCOP: b.82.5.2
Probab=100.00 E-value=1.2e-53 Score=385.38 Aligned_cols=230 Identities=33% Similarity=0.611 Sum_probs=176.7
Q ss_pred CCCeeeEEEecCCceEEEEEeCCCCeEEEecCeeeEEeCCeEEEEEEcccC----cccc----eeeeecceeeeeeeeec
Q 023516 19 QDAVIPFQILGGEAQVCQIMLKPQEKVVARPGSMCFMSGSMEMENIYIPEN----EVGM----WQWLFGKTITSVVLRNP 90 (281)
Q Consensus 19 ~~~~~~f~i~g~~~~il~v~L~~Ge~v~ae~Gamva~sg~v~~~~~~~~~~----~gg~----~~~l~Ge~~f~~~~~~~ 90 (281)
.+..|+|+|.|+++++|+|+|+|||+|++|+|||+||+++|++++++.+++ .+++ .|+++||++|+++|+++
T Consensus 4 ~~~~m~~~i~g~~~~~l~v~L~~ge~v~ae~GaMv~~~g~i~~~~~~~~g~~gG~~~~l~~a~~r~~tGEs~f~~~~t~~ 83 (250)
T 1yox_A 4 ASHELDYRILGESMQTVEIELDPGETVIAEAGAMNYMTGDIRFTARMGDGSDGSLLGKLWSAGKRKLGGESVFMTHFTNE 83 (250)
T ss_dssp ---CCEEEEECSSSCEEEEEECTTCEEEECTTCEEEEETTEEEEECC---------------------------EEEEEC
T ss_pred CCCCceEEEeCCCccEEEEEeCCCCeEEEECCeEEEeeCCeEEEEEecCCCCCchhHhhhhhhhhhhcCCCeEEEEEEec
Confidence 356799999999999999999999999999999999999999999875321 2233 35688999999999998
Q ss_pred CCCceEEEEecCCCCeEEEEEccCCCCeEEEcCCeEEEEeCCEEEEEEEccccceeeeeccceEEEEEEeeeEEEEeeCC
Q 023516 91 GPSDGFVGIAAPSLARILPIDLAMFGGELLCQPDAFLCSVNDVKVSNTLDQRVRNVIGGIEGFLRQKLTGQGLAFILAGG 170 (281)
Q Consensus 91 ~~g~G~V~lap~~~G~I~~i~L~~~ge~i~v~~ga~LA~~~~V~~~~~~~~~~~~~~~gGeglf~~~~sG~G~v~L~~~G 170 (281)
++++|+|+++|+.|++|++++|++.+++|++++++|||++++|++++++.+++++++++|||+|+++++|+|+|||+++|
T Consensus 84 g~~~g~v~la~~~pg~i~~v~L~~~g~~i~~~~ga~lA~~~~v~~~~~~~~~l~~~~~~GEglf~~~~~G~G~v~l~~~G 163 (250)
T 1yox_A 84 GQGKQHVAFAAPYPGSVVAVDLDDVGGRLFCQKDSFLCAAYGTRVGIAFTKRLGAGFFGGEGFILQKLEGDGLVFVHAGG 163 (250)
T ss_dssp SSSCEEEEECCSSSEEEEEEEGGGGTTEEEEEGGGEEEEESSCBCCBC------------CCCCEEEEESSSEEEEEEES
T ss_pred CCCCeEEEEecCCCCcEEEEEecCCCCEEEEeCCeEEEEcCCeeEEEEEccccccceEcCCCcEEEEEEEEEEEEEECCC
Confidence 76789999999999999999998535899999999999999999999987666667999999999999999999999999
Q ss_pred cEEEEEcCCCCEEEEcCCeEEEEcCCeEEEEEEeCceeeeeEecceEEEEEEEecEEEEEeccChhHHHHHHHhhCCCC
Q 023516 171 SVVQKNLEVGEVITVDVSCIVAVTSSVNVQIKYNGPIRRAVFGGDNLVTAVVTGPGIVFIQSLPFHRLSQRIARAVTSP 249 (281)
Q Consensus 171 ~i~~~~L~~ge~l~Vd~~~~vA~~~~v~~~i~~~~gl~~~~~~GEGl~~~~~~G~G~V~lqs~~~~~l~~~~~~~lp~~ 249 (281)
+|++++|+ ||+++||++|+|||+++++|++++.+++++.+++|||+|+++|+|||+||||||+.++|+++|.+.-|.+
T Consensus 164 ~I~~~~L~-ge~l~Vd~~~~vA~~~~v~~~i~~~~g~~~~~~gGEGlf~~~~~G~G~V~lqs~~~~~l~~~l~~~~~~~ 241 (250)
T 1yox_A 164 TLIRRQLN-GETLRVDTGCLVAFTDGIDYDVQLAGGLKSMLFGGEGLLLTTLKGSGTVWLQSLPFSRLAGRIYDATFRA 241 (250)
T ss_dssp SEEEEEEE-EEEEEEEGGGEEEECSSEEEEEEECC-----------CEEEEEEEEEEEEEESSCHHHHHHHHHHTTHHH
T ss_pred eEEEEEeC-CCEEEEECCEEEEECCCccEEEEEcccceeeEEcCCceEEEEEEcCEEEEEEcCCHHHHHhhhhcCCCCc
Confidence 99999998 9999999999999999999999999888888999999998999999999999999999999999876544
No 2
>1pg6_A Hypothetical protein SPYM3_0169; structural genomics, PSI structure initiative, northeast structural genomics consort NESG; 1.70A {Streptococcus pyogenes} SCOP: b.82.5.2
Probab=100.00 E-value=2.2e-53 Score=382.16 Aligned_cols=224 Identities=19% Similarity=0.283 Sum_probs=195.0
Q ss_pred CCeeeEEEecC-CceEEEEEeCCCCeEEEecCeeeEEeCCeEEEEEEccc--Ccccce----e-eeecceeeeeeeeecC
Q 023516 20 DAVIPFQILGG-EAQVCQIMLKPQEKVVARPGSMCFMSGSMEMENIYIPE--NEVGMW----Q-WLFGKTITSVVLRNPG 91 (281)
Q Consensus 20 ~~~~~f~i~g~-~~~il~v~L~~Ge~v~ae~Gamva~sg~v~~~~~~~~~--~~gg~~----~-~l~Ge~~f~~~~~~~~ 91 (281)
+..++|+|.++ ++++++|+|+|||+|++|+|||+||+++|+++++++.+ +.+|++ | +++||++|++++++.+
T Consensus 10 ~~~~~~~I~g~~~~~il~v~L~~ge~v~ae~Gamva~~g~V~~~~~~~~~~~g~ggl~~~l~~~~~~GE~~f~~~~tg~g 89 (243)
T 1pg6_A 10 DNRMRFTIDQNMQFPLVEIDLEHGGSVYLQQGSMVYHTENVTLNTKLNGKGSGLGKLVGAIGRSMVSGESMFITQAMSNG 89 (243)
T ss_dssp --CCEEEECSSCSSCCEEEEECTTCEEEEETTCEEEECTTEEEECTTCC----CSSSHHHHHHHHHHTCCTTEEEEEESS
T ss_pred cCCCCEEEeCCCCceEEEEEeCCCCEEEEECCcEEEecCCEEEEEEeccCccccchhhhhhhcceecCCCeEEEEEEccC
Confidence 46799999998 89999999999999999999999999999999987421 113332 3 5789999999999753
Q ss_pred CCceEEEEecCCCCeEEEEEccCCCCeEEEcCCeEEEEeCCEEEEEEEccccceeeeeccceEEEEEE-eeeEEEEeeCC
Q 023516 92 PSDGFVGIAAPSLARILPIDLAMFGGELLCQPDAFLCSVNDVKVSNTLDQRVRNVIGGIEGFLRQKLT-GQGLAFILAGG 170 (281)
Q Consensus 92 ~g~G~V~lap~~~G~I~~i~L~~~ge~i~v~~ga~LA~~~~V~~~~~~~~~~~~~~~gGeglf~~~~s-G~G~v~L~~~G 170 (281)
+|+|+++|+.||+|.+++|+ |++++|++++|||++++|++++++.+ +++++++|||+|+++++ |+|+|||+++|
T Consensus 90 --~G~v~la~~~~G~I~~i~L~--g~~l~v~~~~~LA~~~~v~~~i~~~~-l~~~~fgGeG~f~~~l~~G~G~v~l~s~G 164 (243)
T 1pg6_A 90 --DGKLALAPNTPGQIVALELG--EKQYRLNDGAFLALDGSAQYKMERQN-IGKALFGGQGGLFVMTTEGLGTLLANSFG 164 (243)
T ss_dssp --SEEEEECCSSSBCEEEEEES--SCCEEEETTCEEEEETTSEEEEEECC-CC-------CCCEEEEEESSEEEEEECSB
T ss_pred --CEEEEEecCCCCcEEEEEeC--CCEEEEECCEEEEECCCceEEEEEEe-eceeEEcCCcceEEEEEecCeEEEEEcCC
Confidence 49999999999999999998 78999999999999999999999974 66789999999999999 99999999999
Q ss_pred cEEEEEcCCCCEEEEcCCeEEEEcCCeEEEEEEeCceeeeeEecceEEEEEEEecEEEEEeccChhHHHHHHHhhCCCCC
Q 023516 171 SVVQKNLEVGEVITVDVSCIVAVTSSVNVQIKYNGPIRRAVFGGDNLVTAVVTGPGIVFIQSLPFHRLSQRIARAVTSPN 250 (281)
Q Consensus 171 ~i~~~~L~~ge~l~Vd~~~~vA~~~~v~~~i~~~~gl~~~~~~GEGl~~~~~~G~G~V~lqs~~~~~l~~~~~~~lp~~~ 250 (281)
+|++++|+|| +++||++|+|||+++++|++++.+++++.+++|||++ ++|+|||+||||||++++|+++|++++|+++
T Consensus 165 ~i~~~~l~~g-~~~VD~~~vVA~~~~l~~~i~~~~g~~~~~~sGEgl~-~~f~GpG~V~vQs~~~~~l~~~l~~~~p~~~ 242 (243)
T 1pg6_A 165 SIKKITLDGG-TMTIDNAHVVAWSRELDYDIHLENGFMQSIGTGEGVV-NTFRGHGEIYIQSLNLEQFAGTLKRYLPTSS 242 (243)
T ss_dssp CEEEEEEEEE-EEEEEGGGEEEEETTSEEEEECSSCHHHHHHHTCCCE-EEEEEEEEEEEESCCHHHHHHHHGGGC----
T ss_pred cEEEEEccCC-eEEEcCCcEEEECCCccEEEEECCCeeeeeecCceEE-EEEECCEEEEEEeCCHHHHHHHHHHHcCCCC
Confidence 9999999999 9999999999999999999999999999899999998 9999999999999999999999999999875
No 3
>1pg6_A Hypothetical protein SPYM3_0169; structural genomics, PSI structure initiative, northeast structural genomics consort NESG; 1.70A {Streptococcus pyogenes} SCOP: b.82.5.2
Probab=99.90 E-value=6.2e-24 Score=190.59 Aligned_cols=126 Identities=19% Similarity=0.347 Sum_probs=107.3
Q ss_pred CeEEEEEccCCCCeEEEcCCeEEEEeCCEEEEEEEc------ccc----ceeeeeccceEEEEEEee--eEEEEee--CC
Q 023516 105 ARILPIDLAMFGGELLCQPDAFLCSVNDVKVSNTLD------QRV----RNVIGGIEGFLRQKLTGQ--GLAFILA--GG 170 (281)
Q Consensus 105 G~I~~i~L~~~ge~i~v~~ga~LA~~~~V~~~~~~~------~~~----~~~~~gGeglf~~~~sG~--G~v~L~~--~G 170 (281)
-.|++|+|++ +|++++++|+|+|++++|++++++. +++ ++++++||++|+++++|+ |+|++++ +|
T Consensus 23 ~~il~v~L~~-ge~v~ae~Gamva~~g~V~~~~~~~~~~~g~ggl~~~l~~~~~~GE~~f~~~~tg~g~G~v~la~~~~G 101 (243)
T 1pg6_A 23 FPLVEIDLEH-GGSVYLQQGSMVYHTENVTLNTKLNGKGSGLGKLVGAIGRSMVSGESMFITQAMSNGDGKLALAPNTPG 101 (243)
T ss_dssp SCCEEEEECT-TCEEEEETTCEEEECTTEEEECTTCC----CSSSHHHHHHHHHHTCCTTEEEEEESSSEEEEECCSSSB
T ss_pred ceEEEEEeCC-CCEEEEECCcEEEecCCEEEEEEeccCccccchhhhhhhcceecCCCeEEEEEEccCCEEEEEecCCCC
Confidence 3599999998 8999999999999999999999875 222 234789999999999977 9999965 69
Q ss_pred cEEEEEcCCCCEEEEcCCeEEEEcCCeEEEEEEeCceeeeeEecceEEEEEEE-ecEEEEEecc
Q 023516 171 SVVQKNLEVGEVITVDVSCIVAVTSSVNVQIKYNGPIRRAVFGGDNLVTAVVT-GPGIVFIQSL 233 (281)
Q Consensus 171 ~i~~~~L~~ge~l~Vd~~~~vA~~~~v~~~i~~~~gl~~~~~~GEGl~~~~~~-G~G~V~lqs~ 233 (281)
+|+.++|+ ||+++||.+++|||++++++++++++ +.+.+++|||+|+.+++ |+|+||+|+.
T Consensus 102 ~I~~i~L~-g~~l~v~~~~~LA~~~~v~~~i~~~~-l~~~~fgGeG~f~~~l~~G~G~v~l~s~ 163 (243)
T 1pg6_A 102 QIVALELG-EKQYRLNDGAFLALDGSAQYKMERQN-IGKALFGGQGGLFVMTTEGLGTLLANSF 163 (243)
T ss_dssp CEEEEEES-SCCEEEETTCEEEEETTSEEEEEECC-CC-------CCCEEEEEESSEEEEEECS
T ss_pred cEEEEEeC-CCEEEEECCEEEEECCCceEEEEEEe-eceeEEcCCcceEEEEEecCeEEEEEcC
Confidence 99999998 99999999999999999999999995 77889999999988999 9999999996
No 4
>1yox_A Hypothetical protein PA3696; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.30A {Pseudomonas aeruginosa} SCOP: b.82.5.2
Probab=99.87 E-value=2e-22 Score=181.44 Aligned_cols=150 Identities=15% Similarity=0.227 Sum_probs=105.1
Q ss_pred CCcccccCccccccCCCCCeeeEEEecC-CceEEEEEeCC-CCeEEEecCeeeEEeCCeEEEEEEcccCcccc-eeeeec
Q 023516 3 APFFSTPFQPYVYQSPQDAVIPFQILGG-EAQVCQIMLKP-QEKVVARPGSMCFMSGSMEMENIYIPENEVGM-WQWLFG 79 (281)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~f~i~g~-~~~il~v~L~~-Ge~v~ae~Gamva~sg~v~~~~~~~~~~~gg~-~~~l~G 79 (281)
.++|+++|+. ....++.. -+-.+ ..+++.|+|++ ||.+++|+|+|+|++++|+++++++ +++ .+.++|
T Consensus 73 Es~f~~~~t~---~g~~~g~v--~la~~~pg~i~~v~L~~~g~~i~~~~ga~lA~~~~v~~~~~~~----~~l~~~~~~G 143 (250)
T 1yox_A 73 ESVFMTHFTN---EGQGKQHV--AFAAPYPGSVVAVDLDDVGGRLFCQKDSFLCAAYGTRVGIAFT----KRLGAGFFGG 143 (250)
T ss_dssp -----EEEEE---CSSSCEEE--EECCSSSEEEEEEEGGGGTTEEEEEGGGEEEEESSCBCCBC----------------
T ss_pred CCeEEEEEEe---cCCCCeEE--EEecCCCCcEEEEEecCCCCEEEEeCCeEEEEcCCeeEEEEEc----cccccceEcC
Confidence 3678888883 32112222 23222 46899999999 9999999999999999999998873 223 234779
Q ss_pred ceeeeeeeeecCCCceEEEEecCCCCeEEEEEccCCCCeEEEcCCeEEEEeCCEEEEEEEccccceeeeeccceEEEEEE
Q 023516 80 KTITSVVLRNPGPSDGFVGIAAPSLARILPIDLAMFGGELLCQPDAFLCSVNDVKVSNTLDQRVRNVIGGIEGFLRQKLT 159 (281)
Q Consensus 80 e~~f~~~~~~~~~g~G~V~lap~~~G~I~~i~L~~~ge~i~v~~ga~LA~~~~V~~~~~~~~~~~~~~~gGeglf~~~~s 159 (281)
|++|.++++ ++|+|++++ +|+|+.++|+ ||+++|+++++||++++|++++++.+++++.+++|||+|+.+++
T Consensus 144 Eglf~~~~~----G~G~v~l~~--~G~I~~~~L~--ge~l~Vd~~~~vA~~~~v~~~i~~~~g~~~~~~gGEGlf~~~~~ 215 (250)
T 1yox_A 144 EGFILQKLE----GDGLVFVHA--GGTLIRRQLN--GETLRVDTGCLVAFTDGIDYDVQLAGGLKSMLFGGEGLLLTTLK 215 (250)
T ss_dssp CCCCEEEEE----SSSEEEEEE--ESSEEEEEEE--EEEEEEEGGGEEEECSSEEEEEEECC-----------CEEEEEE
T ss_pred CCcEEEEEE----EEEEEEEEC--CCeEEEEEeC--CCEEEEECCEEEEECCCccEEEEEcccceeeEEcCCceEEEEEE
Confidence 999998888 569999995 7899999998 68999999999999999999999987776678999999999999
Q ss_pred eeeEEEEeeC
Q 023516 160 GQGLAFILAG 169 (281)
Q Consensus 160 G~G~v~L~~~ 169 (281)
|+|+|||++.
T Consensus 216 G~G~V~lqs~ 225 (250)
T 1yox_A 216 GSGTVWLQSL 225 (250)
T ss_dssp EEEEEEEESS
T ss_pred cCEEEEEEcC
Confidence 9999999963
No 5
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=35.53 E-value=64 Score=26.34 Aligned_cols=40 Identities=20% Similarity=0.218 Sum_probs=32.0
Q ss_pred EEEEEEeeeEEEEeeC-CcEEEEEcCCCCEEEEcCCeEEEE
Q 023516 154 LRQKLTGQGLAFILAG-GSVVQKNLEVGEVITVDVSCIVAV 193 (281)
Q Consensus 154 f~~~~sG~G~v~L~~~-G~i~~~~L~~ge~l~Vd~~~~vA~ 193 (281)
+..-++|++.+.+... |..+.+.|.+|+.+.++++..=.+
T Consensus 99 ~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~ 139 (190)
T 1x82_A 99 VYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRT 139 (190)
T ss_dssp EEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEE
T ss_pred EEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEE
Confidence 4455789999988864 888889999999999998865443
No 6
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=31.73 E-value=61 Score=26.04 Aligned_cols=37 Identities=14% Similarity=-0.039 Sum_probs=28.1
Q ss_pred EEEEEEeeeEEEEeeCCcEEEEEcCCCCEEEEcCCeE
Q 023516 154 LRQKLTGQGLAFILAGGSVVQKNLEVGEVITVDVSCI 190 (281)
Q Consensus 154 f~~~~sG~G~v~L~~~G~i~~~~L~~ge~l~Vd~~~~ 190 (281)
++.-++|...+.+..+|....+.|.+||.+.++++..
T Consensus 143 ~~~Vl~G~~~~~~~~~~~~~~~~l~~GD~~~~~~~~~ 179 (198)
T 2bnm_A 143 FLFVLEGEIHMKWGDKENPKEALLPTGASMFVEEHVP 179 (198)
T ss_dssp EEEEEESCEEEEESCTTSCEEEEECTTCEEEECTTCC
T ss_pred EEEEEeeeEEEEECCcCCcccEEECCCCEEEeCCCCc
Confidence 4445789998888776666678888899888887643
No 7
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=28.24 E-value=99 Score=25.79 Aligned_cols=37 Identities=22% Similarity=0.331 Sum_probs=29.2
Q ss_pred EEEEEEeeeEEEEeeC-CcEEEEEcCCCCEEEEcCCeE
Q 023516 154 LRQKLTGQGLAFILAG-GSVVQKNLEVGEVITVDVSCI 190 (281)
Q Consensus 154 f~~~~sG~G~v~L~~~-G~i~~~~L~~ge~l~Vd~~~~ 190 (281)
...-++|.|...+... |.++++.|.+|+-++|.++-.
T Consensus 107 i~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~ 144 (191)
T 1vr3_A 107 IRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIY 144 (191)
T ss_dssp EEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCC
T ss_pred EEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCc
Confidence 3445689999999875 778888999999898888743
No 8
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=25.50 E-value=1.8e+02 Score=21.66 Aligned_cols=37 Identities=16% Similarity=0.164 Sum_probs=25.6
Q ss_pred EEEEEEeeeEEEEeeCCcEEEEEcCCCCEEEEcCCeEEEEc
Q 023516 154 LRQKLTGQGLAFILAGGSVVQKNLEVGEVITVDVSCIVAVT 194 (281)
Q Consensus 154 f~~~~sG~G~v~L~~~G~i~~~~L~~ge~l~Vd~~~~vA~~ 194 (281)
++.-++|.+.+.+ .|. .++|.+||.+.+.++.-..|.
T Consensus 62 ~~~Vl~G~~~~~~--~g~--~~~l~~GD~v~ip~g~~H~~~ 98 (119)
T 3lwc_A 62 VMIVLEGRLSVST--DGE--TVTAGPGEIVYMPKGETVTIR 98 (119)
T ss_dssp EEEEEEEEEEEEE--TTE--EEEECTTCEEEECTTCEEEEE
T ss_pred EEEEEeCEEEEEE--CCE--EEEECCCCEEEECCCCEEEEE
Confidence 3445678888777 343 467888888888888765554
No 9
>1hf2_A MINC, septum site-determining protein MINC; cell division protein, FTSZ, bacterial cell division, beta helix; 2.2A {Thermotoga maritima} SCOP: b.80.3.1 c.102.1.1
Probab=23.76 E-value=1.9e+02 Score=24.18 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=23.2
Q ss_pred CceEEEEEeCCCCeEEEe----------cCeeeEEeCCeEEEEEE
Q 023516 31 EAQVCQIMLKPQEKVVAR----------PGSMCFMSGSMEMENIY 65 (281)
Q Consensus 31 ~~~il~v~L~~Ge~v~ae----------~Gamva~sg~v~~~~~~ 65 (281)
+.++++=.|+.||.|+++ +||-+..+||+.+=.++
T Consensus 100 ~~~ii~~~vRSGQ~I~~~gdlvVlGdVn~GAeViA~GnI~V~G~L 144 (210)
T 1hf2_A 100 TGKVIKRNIRSGQTVVHSGDVIVFGNVNKGAEILAGGSVVVFGKA 144 (210)
T ss_dssp CCSEECSCBCTTEEEEESSCEEESSCBCTTCEEEESSCEEEEEEE
T ss_pred CcEEEeCcccCCCEEEecCCEEEEccCCCCCEEEeCCcEEEEEee
Confidence 456777778888888865 45556666666654444
No 10
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=22.48 E-value=1.5e+02 Score=23.79 Aligned_cols=39 Identities=15% Similarity=0.232 Sum_probs=26.3
Q ss_pred EEEEEeeeEEEEeeCCcEEEEEcCCCCEEEEcCCeEEEE
Q 023516 155 RQKLTGQGLAFILAGGSVVQKNLEVGEVITVDVSCIVAV 193 (281)
Q Consensus 155 ~~~~sG~G~v~L~~~G~i~~~~L~~ge~l~Vd~~~~vA~ 193 (281)
+.-++|++.+-+...++-...+|.+||.+.+.++..-.+
T Consensus 65 ~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~~ 103 (178)
T 1dgw_A 65 VLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYL 103 (178)
T ss_dssp EEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEE
T ss_pred EEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEEE
Confidence 334677887777655544567888888888887755544
Done!