BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023517
(281 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54TS4|YIPF1_DICDI Protein YIPF1 homolog OS=Dictyostelium discoideum GN=yipf1 PE=3
SV=1
Length = 347
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 129/231 (55%), Gaps = 7/231 (3%)
Query: 48 KISGVSGPPSDVDDTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSL 107
KI G S ++ FS +++E + + + V Y+ F+VDT +V R+ S+
Sbjct: 96 KIGGNSS-----NNKFSDNVPLNTNEDGTEKKYSFYEVPYYRFLFNVDTKEVGLRLIRSM 150
Query: 108 FPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWS 167
P + +F +NPDLYGPFW+ ++L+F+ A Y H ++K W DI + +S
Sbjct: 151 LPIKFSFFNLIRENPDLYGPFWVLTSLVFIVAVTSNLNEYF-HSSDHKSWEVDIQKIVYS 209
Query: 168 AGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVI 227
A YGY ++PL L+ I K+ + L+ + C+YGY+LF+F+PA L V+PL++ +W+I
Sbjct: 210 AITIYGYSFVIPLILWGIFKWMNLGLRLLDMLCIYGYTLFIFVPASILCVIPLQLVQWII 269
Query: 228 AGVAGFMSATFVALNLRAHIKSA-GERWFLIVAAIFLLQLALAVALKIYLF 277
+A +S F+ N+ +K +R +I A I L + LA+ LK+Y F
Sbjct: 270 VAIASIVSGLFLVTNIFTPLKEDFTKRGLIICAVIGALHIGLALVLKLYFF 320
>sp|Q6P6G5|YIPF1_RAT Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1
Length = 306
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 109/206 (52%), Gaps = 12/206 (5%)
Query: 83 FTVAAYKPYFDVDTSDVLERIKDSLFPF--RDTFTEKTSDNPDLYGPFWICSTLIFVAAS 140
+T Y+ +FDVDT V +RIK SL P ++ NPDLYGPFWIC+TL+F A
Sbjct: 77 WTFEYYQTFFDVDTYQVFDRIKGSLLPVPGKNFVRLYIRSNPDLYGPFWICATLVFAIAI 136
Query: 141 IGTFVTYISHKVNNKDWNY--DINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPS----- 193
G ++ H + K ++Y + V +A + Y Y +VPL L+ L + ++
Sbjct: 137 SGNLSNFLIH-LGEKTYHYVPEFQKVSIAATVIYAYAWLVPLALWGFLLWRNSKVMNIVS 195
Query: 194 -GLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGE 252
+++ C+YGYSLF++IP L ++P + RWV+ +A +S + +A+ ++
Sbjct: 196 YSFLEIVCVYGYSLFIYIPTAVLWIIPQRVIRWVLVTIALGISGSVLAMTFWPAVREDNR 255
Query: 253 RWFL-IVAAIFLLQLALAVALKIYLF 277
R L + I LL + L+V Y F
Sbjct: 256 RVALATIVTIMLLHVLLSVGCLAYFF 281
>sp|Q91VU1|YIPF1_MOUSE Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1
Length = 306
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 55 PPSDVDDTFSKPASGSSDEAQS---SGWFRA---FTVAAYKPYFDVDTSDVLERIKDSLF 108
PP V + G++D ++ +G R+ +T Y+ +FDVDT V +RIK SL
Sbjct: 43 PPGSVGREEDEELLGNNDSDETELLAGQKRSSPFWTFEYYQTFFDVDTYQVFDRIKGSLL 102
Query: 109 PF--RDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNY--DINLV 164
P ++ NPDLYGPFWIC+TL+F A G ++ H + K ++Y + V
Sbjct: 103 PVPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIH-LGEKTYHYVPEFQKV 161
Query: 165 PWSAGLFYGYVTIVPLCLYIIL-----KYFSAPS-GLVQLFCLYGYSLFVFIPALCLSVV 218
+A + Y Y +VPL L+ L K S S +++ C+YGYSLF++IP L ++
Sbjct: 162 SIAATVIYAYAWLVPLALWGFLLWRNSKVMSMVSYSFLEIVCVYGYSLFIYIPTAVLWII 221
Query: 219 PLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWFL-IVAAIFLLQLALAVALKIYLF 277
P + RWV+ +A +S + + + ++ R L + I LL + L+V Y F
Sbjct: 222 PQRVVRWVLVMIALGVSGSVLVMTFWPAVREDNRRVALATIVTIVLLHVLLSVGCLAYFF 281
>sp|Q9Y548|YIPF1_HUMAN Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=2 SV=1
Length = 306
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 12/206 (5%)
Query: 83 FTVAAYKPYFDVDTSDVLERIKDSLFPF--RDTFTEKTSDNPDLYGPFWICSTLIFVAAS 140
+T Y+ +FDVDT V +RIK SL P ++ NPDLYGPFWIC+TL+F A
Sbjct: 77 WTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAI 136
Query: 141 IGTFVTYISHKVNNKDWNY--DINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPS----- 193
G ++ H + K ++Y + V +A + Y Y +VPL L+ L + ++
Sbjct: 137 SGNLSNFLIH-LGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVS 195
Query: 194 -GLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGE 252
+++ C+YGYSLF++IP L ++P + RW++ +A +S + +A+ ++
Sbjct: 196 YSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSLLAMTFWPAVREDNR 255
Query: 253 RWFL-IVAAIFLLQLALAVALKIYLF 277
R L + I LL + L+V Y F
Sbjct: 256 RVALATIVTIVLLHMLLSVGCLAYFF 281
>sp|Q5RBL0|YIPF1_PONAB Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1
Length = 306
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 12/206 (5%)
Query: 83 FTVAAYKPYFDVDTSDVLERIKDSLFPF--RDTFTEKTSDNPDLYGPFWICSTLIFVAAS 140
+T Y+ +FDVDT V +RIK SL P ++ NPDLYGPFWIC+TL+F A
Sbjct: 77 WTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAI 136
Query: 141 IGTFVTYISHKVNNKDWNY--DINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPS----- 193
G ++ H + K + Y + V +A Y Y +VPL L+ L + ++
Sbjct: 137 SGNLSNFLIH-LGEKTYRYVPEFRKVSIAATTIYAYAWLVPLALWGFLMWRNSKVMNIVS 195
Query: 194 -GLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGE 252
+++ C+YGYSLF++IP L ++P + RW++ +A +S + +A+ ++
Sbjct: 196 YSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSVLAMTFWPAVREDNR 255
Query: 253 RWFL-IVAAIFLLQLALAVALKIYLF 277
R L + I LL + L+V Y F
Sbjct: 256 RVALATIVTIVLLHMLLSVGCLAYFF 281
>sp|Q99LP8|YIPF2_MOUSE Protein YIPF2 OS=Mus musculus GN=Yipf2 PE=2 SV=1
Length = 312
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 9/172 (5%)
Query: 81 RAFTVAAYKPYFDVDTSDVLERIKDSLFPF--RDTFTEKTSDNPDLYGPFWICSTLIFVA 138
R +T Y+ +FDVDTS VL+RIK SL P + + PDLYGPFWIC+TL FV
Sbjct: 73 RFWTFDYYQSFFDVDTSQVLDRIKGSLLPHPGHNFVRHHLRNRPDLYGPFWICATLAFVL 132
Query: 139 ASIGTFVTYISHKVN-NKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQ 197
A G ++ + + + ++ + V + Y Y +VPL L+ L++ +
Sbjct: 133 AVTGNLTLVLAQRRDPSIHYSPQFHKVTIAGITIYCYAWLVPLALWGFLRWRQGTRERMG 192
Query: 198 LF------CLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNL 243
L+ C+YGYSLFVFIP + L ++P++ +W+ + +SA + L
Sbjct: 193 LYTFLETVCVYGYSLFVFIPTVVLWLIPVQWIQWLFGALGLALSAAGLVFTL 244
>sp|Q9BWQ6|YIPF2_HUMAN Protein YIPF2 OS=Homo sapiens GN=YIPF2 PE=2 SV=1
Length = 316
Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 83 FTVAAYKPYFDVDTSDVLERIKDSLFPF--RDTFTEKTSDNPDLYGPFWICSTLIFVAAS 140
+T + Y+ +FDVDTS VL+RIK SL P + + PDLYGPFWIC+TL FV A
Sbjct: 78 WTFSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPDLYGPFWICATLAFVLAV 137
Query: 141 IGTFVTYISHKVNNK-DWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSA------PS 193
G ++ + + ++ + V + Y Y +VPL L+ L++ P
Sbjct: 138 TGNLTLVLAQRRDPSIHYSPQFHKVTVAGISIYCYAWLVPLALWGFLRWRKGVQERMGPY 197
Query: 194 GLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNL 243
++ C+YGYSLFVFIP + L ++P+ +W+ +A +SA + L
Sbjct: 198 TFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSAAGLVFTL 247
>sp|Q5XIT3|YIPF2_RAT Protein YIPF2 OS=Rattus norvegicus GN=Yipf2 PE=2 SV=1
Length = 311
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 81 RAFTVAAYKPYFDVDTSDVLERIKDSLFPF--RDTFTEKTSDNPDLYGPFWICSTLIFVA 138
R +T Y+ +FDVDTS VL+RIK SL P + + PDLYGPFWIC+TL FV
Sbjct: 72 RFWTFDYYQSFFDVDTSQVLDRIKGSLLPHPGHNFVRHHLRNRPDLYGPFWICATLAFVL 131
Query: 139 ASIGTFVTYISHKVN-NKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQ 197
A G ++ + + + ++ + V + Y Y +VPL L+ L++ +
Sbjct: 132 AVTGNLTLVLAQRRDPSIHYSPQFHKVTIAGITIYCYAWLVPLALWGFLRWRQGTRERMG 191
Query: 198 LF------CLYGYSLFVFIPALCLSVVPLEIFRW 225
L+ C+YGYSLFVFIP + L ++P++ +W
Sbjct: 192 LYTFLETVCVYGYSLFVFIPTVVLWLIPVQWLQW 225
>sp|Q9UTD3|YIP5_SCHPO Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=yip5 PE=3 SV=1
Length = 249
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 33 SDSNLQTFPPSDTRGKISGVSGPPSDVDDTFSKPASGSSDEAQSSGWFRAFTVAAYKPYF 92
+D TF D + + ++ PP+ S+ AS Q + W K F
Sbjct: 11 ADLGRTTFEAEDLYKQRTPITKPPAPRLQ--SRRAS-----MQETPW-------TIKDSF 56
Query: 93 DVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKV 152
+V+T DV++R +L P + F + D PDLYGPFWI +T+I + Y +
Sbjct: 57 NVETKDVVQRCIHTLIPTVNFF-DVVDDRPDLYGPFWITTTVIQALFFSNSITEYARYAT 115
Query: 153 NNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPA 212
+ Y I + +A + YGY TI+ + L+ IL + L+ CLYGY+ V++P
Sbjct: 116 GHGTSGYSIKKLISAASIIYGYTTIIAVLLWGILVWNKCNPKLLDCLCLYGYANIVWLPV 175
Query: 213 L-------CLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWF-LIVAAIFLL 264
LS + I ++V+ G+ +S F+ NL + AG L++ I +
Sbjct: 176 SLATPPFGLLSTLASHIVKYVLTGIGLLISIVFLTRNLYPICQQAGSNLCKLLLFGIIVF 235
Query: 265 QLALAVALKIYLFT 278
LA++L++ F+
Sbjct: 236 HCLLALSLQLIFFS 249
>sp|P53108|YIP5_YEAST Protein YIP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=YIP5 PE=1 SV=1
Length = 310
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 103/275 (37%), Gaps = 30/275 (10%)
Query: 17 GSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVDDTFSKPASGSSDEAQS 76
+VP P+ T T + G PP+ + + + ++
Sbjct: 31 ATVPDSPNMNNSTAGKGSEFYNTTGSKAESAPLQGQMDPPA-----YDQVIGQNDNDGLG 85
Query: 77 SGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIF 136
R + Y YF +D + +R+ L D +E DN DLYG WI +T++
Sbjct: 86 RNGLRPGLINYYSKYFQIDLTQFKKRLSAVLTFRNDHNSESNEDNTDLYGAVWITATVVM 145
Query: 137 VAASIGTFVTY-ISHKVNNKDWNYDINLVPW------SAGLFYGYVTIVPLCLYIILKYF 189
+ ++ + + IS + DI+ S LFYGY VP +L
Sbjct: 146 INFTMSRGLNFIISDVIEGVKTGEDIDRASQFKKLLHSIWLFYGYTFGVPFITMQVLNRD 205
Query: 190 SAPS------GLVQLFCLYGYSLFVFIP-ALCLSVVPL-------EIFRWVIAGVAGFMS 235
+ +L +YGY+ ++IP + L+++ + + +W I + S
Sbjct: 206 EHSERNRSFKSVPELISVYGYANLIWIPVCVILNILDMSKRLRTVQAIQWAIVALGWAQS 265
Query: 236 ATF----VALNLRAHIKSAGERWFLIVAAIFLLQL 266
+ F ++ N +S G+ I+ + L L
Sbjct: 266 SYFLNSQISSNNNTETQSNGKFSLSIIVVVALHTL 300
>sp|Q3UDR8|YIPF3_MOUSE Protein YIPF3 OS=Mus musculus GN=Yipf3 PE=1 SV=1
Length = 347
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 81 RAFTVAA----YKPYFDVDTSDVLERIKDSLFPFRD-TFTEKTSDNPDLYGPFWICSTLI 135
RAF++ A +PYFDV+ + V R+ +S+ P + F +K + +LYGP + TL+
Sbjct: 104 RAFSLYANIDILRPYFDVEPAQVRSRLLESMIPIKMVNFPQKVAG--ELYGPLMLVFTLV 161
Query: 136 FVAASIGTFVTYISHKVNNKD-WNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSG 194
+ + H + D + L+ + G +GY V +Y + +A
Sbjct: 162 AI----------LLHGMKTSDTIIREGTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQIT 211
Query: 195 LVQLFCLYGYSLF 207
++Q+ L GY LF
Sbjct: 212 MLQMLALLGYGLF 224
>sp|Q9GZM5|YIPF3_HUMAN Protein YIPF3 OS=Homo sapiens GN=YIPF3 PE=1 SV=1
Length = 350
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 81 RAFTVAA----YKPYFDVDTSDVLERIKDSLFPFRD-TFTEKTSDNPDLYGPFWICSTLI 135
RAF++ A +PYFDV+ + V R+ +S+ P + F +K + +LYGP + TL+
Sbjct: 107 RAFSLYANIDILRPYFDVEPAQVRSRLLESMIPIKMVNFPQKIAG--ELYGPLMLVFTLV 164
Query: 136 FVAASIGTFVTYISHKVNNKD-WNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSG 194
+ + H + D + L+ + G +GY V +Y + +A
Sbjct: 165 AI----------LLHGMKTSDTIIREGTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQIT 214
Query: 195 LVQLFCLYGYSLF 207
++Q+ L GY LF
Sbjct: 215 MLQMLALLGYGLF 227
>sp|Q6TUD4|YIPF3_RAT Protein YIPF3 OS=Rattus norvegicus GN=Yipf3 PE=2 SV=1
Length = 347
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 70 SSDEAQSSGWFRAF-TVAAYKPYFDVDTSDVLERIKDSLFPFRD-TFTEKTSDNPDLYGP 127
+ + Q+S F + + +PYFDV+ + V R+ +S+ P + F +K + +LYGP
Sbjct: 96 QAGKRQASKAFSLYANIDILRPYFDVEPAQVRSRLLESMIPIKMVNFPQKVAG--ELYGP 153
Query: 128 FWICSTLIFVAASIGTFVTYISHKVNNKD-WNYDINLVPWSAGLFYGYVTIVPLCLYIIL 186
+ TL+ + + H + D + L+ + G +GY V +Y +
Sbjct: 154 LMLVFTLVAI----------LLHGMKTSDTIIREGTLMGTAIGTCFGYWLGVSSFIYFLA 203
Query: 187 KYFSAPSGLVQLFCLYGYSLF 207
+A ++Q+ L GY LF
Sbjct: 204 YLCNAQITMLQMLALLGYGLF 224
>sp|Q803Z2|YIPF3_DANRE Protein YIPF3 OS=Danio rerio GN=yipf3 PE=2 SV=1
Length = 344
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 15/141 (10%)
Query: 70 SSDEAQSSGWFRAF-TVAAYKPYFDVDTSDVLERIKDSLFPFRD-TFTEKTSDNPDLYGP 127
+ + Q+S F + + +PYFDV+ V R+ +SL P R F +K + +LYGP
Sbjct: 97 QAGKRQASKAFNLYANIDILRPYFDVEPIQVRNRLVESLIPVRMINFPQKVAG--ELYGP 154
Query: 128 FWICSTLI-FVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIIL 186
+ TL+ + + T T I L+ + G +GY V +Y +
Sbjct: 155 MMLVFTLVAILLHGMKTSGTVIREG----------TLMGTAIGTGFGYWLGVSSFIYFLA 204
Query: 187 KYFSAPSGLVQLFCLYGYSLF 207
+A ++Q+ L GY LF
Sbjct: 205 YLCNAQITMLQMLSLLGYGLF 225
>sp|Q5F384|YIPF3_CHICK Protein YIPF3 OS=Gallus gallus GN=YIPF3 PE=2 SV=1
Length = 336
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 81 RAFTVAA----YKPYFDVDTSDVLERIKDSLFPFRD-TFTEKTSDNPDLYGPFWICSTLI 135
+AF++ A +PYFDV+ V R+ +S+ P + F +K + +LYGP + TL+
Sbjct: 102 KAFSLYANIDILRPYFDVEPVQVRTRLLESMVPVKMINFPQKIAG--ELYGPLMLVFTLV 159
Query: 136 FVAASIGTFVTYISHKVNNKD-WNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSG 194
+ + H + D + L+ + G +GY V +Y + +A
Sbjct: 160 AI----------LLHGMKTSDTIIREGTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQIT 209
Query: 195 LVQLFCLYGYSLF 207
+VQ+ L GY LF
Sbjct: 210 MVQMLSLLGYGLF 222
>sp|Q3B8G4|YIPF3_XENLA Protein YIPF3 OS=Xenopus laevis GN=yipf3 PE=2 SV=1
Length = 341
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 85/220 (38%), Gaps = 30/220 (13%)
Query: 1 MMSGGNYTSIDNQKL---SGSVPAVPDPGQVTVKFSDSNLQTFP-----PSDTRGKISGV 52
M SGG ID + + SGS + D G++ + + + G G+
Sbjct: 23 MQSGGGAAVIDMENMDDTSGS--SFEDMGEIHQHMKEEEEEVEGEGVPEDGEEDGAFLGM 80
Query: 53 SGPPSDVDDTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRD 112
G + + + S + + +PYFDV+ V R+ +S+ P +
Sbjct: 81 KGVQGQLGRQVADEMWQAGKRQASKAFNLYANIDILRPYFDVEPIQVRHRLLESMIPVKM 140
Query: 113 -TFTEKTSDNPDLYGPFWICSTLIFV----AASIGTFVTYISHKVNNKDWNYDINLVPWS 167
+F +K + +LYGP + T++ + S GT + + L+ +
Sbjct: 141 ISFPQKIAG--ELYGPLMLVFTMVAILLHGMKSSGTIIR-------------EGTLMGTA 185
Query: 168 AGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLF 207
G +GY V +Y + +A ++Q L GY LF
Sbjct: 186 IGTCFGYWLGVSSFIYFLAYLCNAQITMLQTLSLLGYGLF 225
>sp|P55197|AF10_HUMAN Protein AF-10 OS=Homo sapiens GN=MLLT10 PE=1 SV=1
Length = 1027
Score = 35.4 bits (80), Expect = 0.44, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 12/72 (16%)
Query: 7 YTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVDDTFSKP 66
YTS N +SGS+ + D T +F+++N Q + GK DV +T
Sbjct: 267 YTSTSNNSISGSLKRLED---TTARFTNANFQEVSAHTSSGK---------DVSETRGSE 314
Query: 67 ASGSSDEAQSSG 78
G A SSG
Sbjct: 315 GKGKKSSAHSSG 326
>sp|Q758T8|SWC3_ASHGO SWR1-complex protein 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=SWC3 PE=3 SV=2
Length = 688
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 27/186 (14%)
Query: 9 SIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPP--------------SDTRGKISGVSG 54
+++ Q+ + P+ P P + + + S + + PP SD+RG++S
Sbjct: 340 TVEQQESASQTPSTPLPRKASPESSQVDNLSSPPHGSDPNSSFTEASMSDSRGELSETKS 399
Query: 55 PPSDVDDTFSKPASGSSDEAQSSGWFRAFTVAA--YKPYFDVDTSDVLERIKDSLFPFRD 112
S V D ++GSS +A G A A +P + ++D +K P RD
Sbjct: 400 GGSLVPD-----STGSSGQALDKGPTDASGSANDLSRPGATLSSTDGAPPLKQETIPVRD 454
Query: 113 TFTEKTSDNP-DLYGPFWICSTLIFVAASIGT----FVTYISHKVNNKDWNYDINLVPWS 167
+K +D P + +G T I + A GT Y K +D + + L +
Sbjct: 455 -MGDKNADKPLEAHGAISEKGTTITIKAEEGTAPRQKRKYTKRKKEVEDEDKSMQLTTFQ 513
Query: 168 AGLFYG 173
G
Sbjct: 514 QKYLNG 519
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,305,713
Number of Sequences: 539616
Number of extensions: 4732045
Number of successful extensions: 9420
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 9374
Number of HSP's gapped (non-prelim): 41
length of query: 281
length of database: 191,569,459
effective HSP length: 116
effective length of query: 165
effective length of database: 128,974,003
effective search space: 21280710495
effective search space used: 21280710495
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)