Query 023518
Match_columns 281
No_of_seqs 279 out of 1758
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 08:12:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023518.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023518hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xcm_C SGT1-like protein, cyto 99.9 1.2E-24 4.1E-29 158.9 9.5 91 172-262 1-91 (92)
2 1wh0_A Ubiquitin carboxyl-term 99.9 2.6E-24 8.7E-29 166.7 8.2 93 172-264 18-123 (134)
3 1rl1_A Suppressor of G2 allele 99.9 6.2E-24 2.1E-28 161.3 9.3 104 171-274 7-110 (114)
4 1x5m_A Calcyclin-binding prote 99.9 2.2E-23 7.5E-28 161.0 9.6 90 174-263 21-115 (127)
5 4gco_A Protein STI-1; structur 99.9 1.1E-20 3.7E-25 145.5 16.1 112 2-113 13-124 (126)
6 1ejf_A Progesterone receptor P 99.8 3.8E-21 1.3E-25 147.9 8.9 89 175-265 5-95 (125)
7 2kmw_A Uncharacterized protein 99.8 2.9E-21 1E-25 152.6 8.3 89 174-265 5-94 (150)
8 1wgv_A KIAA1068 protein; CS do 99.8 4E-20 1.4E-24 142.0 11.2 98 174-271 20-120 (124)
9 2hr2_A Hypothetical protein; a 99.8 9.4E-20 3.2E-24 145.2 11.0 120 1-120 10-152 (159)
10 3upv_A Heat shock protein STI1 99.8 1.5E-18 5.2E-23 132.0 14.6 116 2-117 4-125 (126)
11 3rkv_A Putative peptidylprolyl 99.8 1.4E-18 4.7E-23 138.4 13.9 120 2-121 11-149 (162)
12 3sz7_A HSC70 cochaperone (SGT) 99.8 8E-18 2.7E-22 134.1 17.6 120 2-121 11-132 (164)
13 2o30_A Nuclear movement protei 99.8 3.1E-19 1.1E-23 138.3 8.7 93 174-270 5-98 (131)
14 2cg9_X CO-chaperone protein SB 99.8 9.6E-20 3.3E-24 141.5 4.5 91 174-266 7-113 (134)
15 1wfi_A Nuclear distribution ge 99.8 1.7E-18 5.8E-23 134.3 11.3 95 174-271 8-107 (131)
16 3gyz_A Chaperone protein IPGC; 99.8 1.4E-17 4.9E-22 132.2 15.4 103 2-104 36-138 (151)
17 4gcn_A Protein STI-1; structur 99.8 1E-17 3.4E-22 128.7 13.5 111 2-113 8-125 (127)
18 2vgx_A Chaperone SYCD; alterna 99.8 3.4E-17 1.1E-21 129.2 16.1 118 3-120 22-139 (148)
19 2xcb_A PCRH, regulatory protei 99.8 3.6E-17 1.2E-21 127.5 15.5 118 3-120 19-136 (142)
20 3qor_A Nuclear migration prote 99.7 6.9E-18 2.3E-22 128.8 10.4 88 174-264 17-109 (121)
21 4ga2_A E3 SUMO-protein ligase 99.7 2.9E-17 9.8E-22 129.8 12.1 112 4-115 33-145 (150)
22 3q49_B STIP1 homology and U bo 99.7 3.2E-16 1.1E-20 120.1 15.2 119 2-120 9-132 (137)
23 2rh0_A NUDC domain-containing 99.7 1.9E-17 6.3E-22 131.9 8.3 87 173-263 13-104 (157)
24 2fbn_A 70 kDa peptidylprolyl i 99.7 7.9E-16 2.7E-20 126.2 16.7 120 2-121 38-173 (198)
25 1hxi_A PEX5, peroxisome target 99.7 4.5E-16 1.5E-20 118.5 13.6 102 4-105 19-120 (121)
26 3urz_A Uncharacterized protein 99.7 5.6E-16 1.9E-20 128.7 15.0 117 2-118 4-136 (208)
27 1elw_A TPR1-domain of HOP; HOP 99.7 1.8E-15 6.3E-20 111.7 16.0 114 2-115 4-117 (118)
28 2lni_A Stress-induced-phosphop 99.7 8.9E-16 3E-20 116.2 13.9 116 3-118 17-132 (133)
29 1p5q_A FKBP52, FK506-binding p 99.7 1.5E-15 5.3E-20 135.6 17.1 119 2-120 147-280 (336)
30 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 1.1E-15 3.9E-20 142.1 16.1 119 2-120 268-401 (457)
31 2xev_A YBGF; tetratricopeptide 99.7 1.7E-15 5.6E-20 114.8 14.2 115 1-115 1-121 (129)
32 2vyi_A SGTA protein; chaperone 99.7 4.6E-15 1.6E-19 111.4 16.5 117 3-119 13-129 (131)
33 2dba_A Smooth muscle cell asso 99.7 3.8E-15 1.3E-19 114.9 15.3 113 2-114 28-143 (148)
34 2pl2_A Hypothetical conserved 99.6 3.4E-15 1.2E-19 124.7 15.5 119 2-120 5-134 (217)
35 1a17_A Serine/threonine protei 99.6 1.2E-14 4E-19 114.3 17.0 114 2-115 13-126 (166)
36 4gyw_A UDP-N-acetylglucosamine 99.6 3.2E-15 1.1E-19 146.4 15.9 116 4-119 45-160 (723)
37 1ihg_A Cyclophilin 40; ppiase 99.6 2.9E-15 1E-19 135.7 14.4 119 2-120 223-357 (370)
38 1elr_A TPR2A-domain of HOP; HO 99.6 9.1E-15 3.1E-19 109.9 14.8 118 2-120 4-128 (131)
39 4ga2_A E3 SUMO-protein ligase 99.6 5.9E-16 2E-20 122.2 7.5 113 8-120 3-115 (150)
40 4i17_A Hypothetical protein; T 99.6 2.4E-14 8.2E-19 119.5 17.0 105 2-106 7-112 (228)
41 1na0_A Designed protein CTPR3; 99.6 4.3E-14 1.5E-18 105.1 16.4 115 3-117 10-124 (125)
42 2pl2_A Hypothetical conserved 99.6 2.1E-14 7.1E-19 119.9 15.5 118 2-120 39-167 (217)
43 4gyw_A UDP-N-acetylglucosamine 99.6 1.1E-14 3.8E-19 142.5 15.9 119 2-120 9-127 (723)
44 2h6f_A Protein farnesyltransfe 99.6 8.5E-15 2.9E-19 133.3 13.9 116 4-119 99-215 (382)
45 3vtx_A MAMA; tetratricopeptide 99.6 3.7E-14 1.3E-18 114.2 16.0 118 2-119 5-156 (184)
46 1zu2_A Mitochondrial import re 99.6 1.2E-14 4.2E-19 115.4 11.9 106 12-117 12-138 (158)
47 2h6f_A Protein farnesyltransfe 99.6 7.9E-15 2.7E-19 133.5 12.2 115 2-116 131-246 (382)
48 2if4_A ATFKBP42; FKBP-like, al 99.6 2.8E-15 9.7E-20 134.0 8.5 118 2-119 179-313 (338)
49 2c2l_A CHIP, carboxy terminus 99.6 3.3E-14 1.1E-18 123.7 14.6 102 2-103 4-105 (281)
50 4i17_A Hypothetical protein; T 99.6 6.5E-14 2.2E-18 116.8 15.1 118 3-120 43-169 (228)
51 2kck_A TPR repeat; tetratricop 99.6 2.8E-14 9.7E-19 104.3 11.1 102 3-104 7-111 (112)
52 3urz_A Uncharacterized protein 99.5 2.1E-13 7.2E-18 113.0 16.8 106 8-114 60-200 (208)
53 2e2e_A Formate-dependent nitri 99.5 1.6E-13 5.6E-18 109.9 15.4 114 2-115 44-160 (177)
54 3k9i_A BH0479 protein; putativ 99.5 9.3E-15 3.2E-19 109.9 7.4 101 14-114 2-105 (117)
55 3vtx_A MAMA; tetratricopeptide 99.5 4E-13 1.4E-17 108.1 15.9 103 3-105 74-176 (184)
56 3qky_A Outer membrane assembly 99.5 3.5E-13 1.2E-17 114.8 15.2 106 2-107 15-134 (261)
57 1wao_1 Serine/threonine protei 99.5 4.5E-14 1.6E-18 132.0 10.3 115 3-117 7-121 (477)
58 3gyz_A Chaperone protein IPGC; 99.5 1.9E-14 6.6E-19 114.1 6.4 106 15-120 15-120 (151)
59 1hh8_A P67PHOX, NCF-2, neutrop 99.5 1.2E-12 4E-17 107.5 17.3 103 3-105 38-156 (213)
60 2fo7_A Synthetic consensus TPR 99.5 7.6E-13 2.6E-17 99.2 14.8 117 2-118 1-117 (136)
61 2l6j_A TPR repeat-containing p 99.5 3.9E-14 1.3E-18 104.1 6.5 95 2-96 4-104 (111)
62 3uq3_A Heat shock protein STI1 99.5 5.2E-13 1.8E-17 111.9 14.1 111 3-113 140-256 (258)
63 1xnf_A Lipoprotein NLPI; TPR, 99.5 1.1E-12 3.9E-17 111.2 16.3 111 3-113 44-154 (275)
64 1hh8_A P67PHOX, NCF-2, neutrop 99.5 6.8E-13 2.3E-17 109.0 14.1 115 3-120 7-137 (213)
65 3as5_A MAMA; tetratricopeptide 99.5 2.1E-12 7E-17 102.4 15.8 116 4-119 44-159 (186)
66 4abn_A Tetratricopeptide repea 99.5 7.3E-13 2.5E-17 123.6 14.1 118 3-120 171-308 (474)
67 3ieg_A DNAJ homolog subfamily 99.4 3.9E-12 1.3E-16 111.4 17.4 116 5-120 237-356 (359)
68 3as5_A MAMA; tetratricopeptide 99.4 1.7E-12 5.9E-17 102.9 13.7 118 3-120 9-126 (186)
69 2vsy_A XCC0866; transferase, g 99.4 1.7E-12 5.7E-17 123.3 16.0 116 2-117 23-138 (568)
70 2yhc_A BAMD, UPF0169 lipoprote 99.4 2.9E-12 9.9E-17 107.2 15.5 107 2-108 4-134 (225)
71 1fch_A Peroxisomal targeting s 99.4 1.8E-12 6.3E-17 114.7 15.0 118 3-120 218-346 (368)
72 2kat_A Uncharacterized protein 99.4 2.1E-12 7.2E-17 96.2 12.9 102 19-120 2-105 (115)
73 2pzi_A Probable serine/threoni 99.4 3.5E-13 1.2E-17 131.2 11.0 117 3-120 434-550 (681)
74 3uq3_A Heat shock protein STI1 99.4 1.8E-12 6.3E-17 108.5 13.8 119 2-120 79-223 (258)
75 4abn_A Tetratricopeptide repea 99.4 1.2E-12 4.1E-17 122.1 13.8 115 2-117 102-226 (474)
76 4eqf_A PEX5-related protein; a 99.4 1.7E-12 5.7E-17 115.4 14.1 118 3-120 214-343 (365)
77 2q7f_A YRRB protein; TPR, prot 99.4 3.5E-12 1.2E-16 106.1 15.2 110 5-114 60-169 (243)
78 2q7f_A YRRB protein; TPR, prot 99.4 5.4E-12 1.9E-16 105.0 16.3 118 3-120 92-209 (243)
79 3ieg_A DNAJ homolog subfamily 99.4 3.9E-12 1.3E-16 111.4 15.8 110 2-111 3-115 (359)
80 3qou_A Protein YBBN; thioredox 99.4 2.4E-12 8.3E-17 112.0 14.3 118 3-120 118-271 (287)
81 4gco_A Protein STI-1; structur 99.4 6.4E-13 2.2E-17 101.6 9.3 94 27-120 4-97 (126)
82 3u4t_A TPR repeat-containing p 99.4 2.8E-12 9.4E-17 108.9 13.8 117 3-119 75-191 (272)
83 3u4t_A TPR repeat-containing p 99.4 1.3E-12 4.5E-17 110.9 11.3 118 3-120 4-124 (272)
84 2vq2_A PILW, putative fimbrial 99.4 6.6E-12 2.3E-16 102.9 15.0 113 4-116 10-125 (225)
85 2vgx_A Chaperone SYCD; alterna 99.4 4.7E-13 1.6E-17 105.2 7.6 100 21-120 6-105 (148)
86 4eqf_A PEX5-related protein; a 99.4 2.8E-12 9.5E-17 114.0 13.2 115 6-120 181-297 (365)
87 2vq2_A PILW, putative fimbrial 99.4 1.1E-11 3.6E-16 101.6 15.7 118 3-120 43-163 (225)
88 2pzi_A Probable serine/threoni 99.4 7.3E-13 2.5E-17 129.0 10.0 112 2-114 467-578 (681)
89 2ho1_A Type 4 fimbrial biogene 99.4 8.2E-12 2.8E-16 104.9 15.2 116 4-119 73-190 (252)
90 2r5s_A Uncharacterized protein 99.4 3.7E-12 1.3E-16 102.4 12.5 117 3-119 7-159 (176)
91 3qky_A Outer membrane assembly 99.4 8.2E-12 2.8E-16 106.3 14.9 119 3-121 90-249 (261)
92 2ho1_A Type 4 fimbrial biogene 99.4 5.2E-12 1.8E-16 106.1 13.5 118 2-119 37-156 (252)
93 1w3b_A UDP-N-acetylglucosamine 99.4 5.1E-12 1.7E-16 113.3 14.2 117 3-119 238-354 (388)
94 2fo7_A Synthetic consensus TPR 99.4 1.1E-11 3.8E-16 92.7 13.9 101 3-103 36-136 (136)
95 3cv0_A Peroxisome targeting si 99.4 8.5E-12 2.9E-16 108.1 14.4 118 3-120 173-302 (327)
96 2gw1_A Mitochondrial precursor 99.4 1.6E-11 5.4E-16 113.3 16.7 104 2-106 6-109 (514)
97 2y4t_A DNAJ homolog subfamily 99.4 1.7E-11 5.9E-16 111.5 16.5 109 2-110 26-137 (450)
98 1w3b_A UDP-N-acetylglucosamine 99.4 1.2E-11 4E-16 111.0 15.1 119 2-120 203-321 (388)
99 2y4t_A DNAJ homolog subfamily 99.4 2.2E-11 7.5E-16 110.8 16.9 116 5-120 260-379 (450)
100 3hym_B Cell division cycle pro 99.4 1.4E-11 4.9E-16 106.8 15.0 118 3-120 91-209 (330)
101 2yhc_A BAMD, UPF0169 lipoprote 99.4 8.2E-12 2.8E-16 104.4 13.0 118 3-120 42-200 (225)
102 2e2e_A Formate-dependent nitri 99.4 1.4E-12 4.9E-17 104.4 7.7 113 8-120 16-131 (177)
103 3hym_B Cell division cycle pro 99.3 1.8E-11 6.3E-16 106.1 15.0 117 4-120 161-286 (330)
104 2xcb_A PCRH, regulatory protei 99.3 2.4E-12 8.3E-17 99.8 8.1 98 23-120 5-102 (142)
105 1fch_A Peroxisomal targeting s 99.3 1.6E-11 5.5E-16 108.6 14.2 105 3-107 65-169 (368)
106 2kc7_A BFR218_protein; tetratr 99.3 4.9E-12 1.7E-16 91.4 8.8 92 5-104 3-95 (99)
107 1na3_A Designed protein CTPR2; 99.3 3.5E-11 1.2E-15 84.9 12.1 79 5-83 12-90 (91)
108 3mkr_A Coatomer subunit epsilo 99.3 3.5E-11 1.2E-15 105.1 14.6 114 4-117 132-247 (291)
109 3fp2_A TPR repeat-containing p 99.3 1.2E-11 4.3E-16 114.9 11.5 103 2-105 25-127 (537)
110 3cv0_A Peroxisome targeting si 99.3 3.5E-11 1.2E-15 104.2 13.5 108 3-110 22-129 (327)
111 3mkr_A Coatomer subunit epsilo 99.3 6E-11 2E-15 103.6 14.8 99 13-111 177-276 (291)
112 1p5q_A FKBP52, FK506-binding p 99.3 4.8E-11 1.6E-15 106.3 14.0 96 2-97 196-292 (336)
113 1a17_A Serine/threonine protei 99.3 1E-10 3.4E-15 91.5 13.8 97 3-99 48-146 (166)
114 3fp2_A TPR repeat-containing p 99.3 3.7E-11 1.3E-15 111.7 12.9 117 4-120 278-394 (537)
115 1xnf_A Lipoprotein NLPI; TPR, 99.2 2.8E-11 9.6E-16 102.5 10.3 109 12-120 15-127 (275)
116 2vsy_A XCC0866; transferase, g 99.2 9.4E-11 3.2E-15 111.2 14.8 104 2-105 57-163 (568)
117 1qqe_A Vesicular transport pro 99.2 5.2E-11 1.8E-15 103.6 11.8 118 2-119 77-214 (292)
118 3upv_A Heat shock protein STI1 99.2 5.7E-11 1.9E-15 89.6 10.0 87 34-120 2-88 (126)
119 3ma5_A Tetratricopeptide repea 99.2 8.5E-11 2.9E-15 85.7 10.5 75 31-105 2-76 (100)
120 2l6j_A TPR repeat-containing p 99.2 1.6E-10 5.3E-15 84.5 11.5 86 35-120 3-94 (111)
121 1qqe_A Vesicular transport pro 99.2 6.5E-11 2.2E-15 103.0 10.9 103 3-105 118-234 (292)
122 3edt_B KLC 2, kinesin light ch 99.2 5.1E-11 1.8E-15 100.7 10.0 118 3-120 44-185 (283)
123 4gcn_A Protein STI-1; structur 99.2 6.3E-11 2.2E-15 90.4 9.5 84 35-118 7-90 (127)
124 1na3_A Designed protein CTPR2; 99.2 1.3E-10 4.5E-15 81.8 10.5 84 34-117 7-90 (91)
125 4g1t_A Interferon-induced prot 99.2 4.3E-10 1.5E-14 103.1 16.6 118 3-120 52-188 (472)
126 2xpi_A Anaphase-promoting comp 99.2 2.3E-10 8E-15 107.9 14.8 118 3-120 442-566 (597)
127 2xpi_A Anaphase-promoting comp 99.2 3.6E-10 1.2E-14 106.6 15.5 117 4-120 375-491 (597)
128 1hxi_A PEX5, peroxisome target 99.2 3.8E-10 1.3E-14 85.3 11.6 83 38-120 19-101 (121)
129 2ond_A Cleavage stimulation fa 99.2 3.6E-10 1.2E-14 98.9 12.9 113 4-116 101-215 (308)
130 3sz7_A HSC70 cochaperone (SGT) 99.1 2E-10 6.8E-15 90.8 10.1 89 32-120 7-95 (164)
131 4a1s_A PINS, partner of inscut 99.1 2.4E-10 8.2E-15 102.8 11.8 117 3-119 49-181 (411)
132 3q49_B STIP1 homology and U bo 99.1 4.2E-10 1.4E-14 85.5 11.5 91 30-120 3-93 (137)
133 1kt0_A FKBP51, 51 kDa FK506-bi 99.1 2.8E-10 9.7E-15 105.5 12.3 91 2-92 317-407 (457)
134 2gw1_A Mitochondrial precursor 99.1 3E-10 1E-14 104.7 12.4 111 4-114 374-493 (514)
135 2vyi_A SGTA protein; chaperone 99.1 5E-10 1.7E-14 83.3 11.1 84 3-86 47-130 (131)
136 1wao_1 Serine/threonine protei 99.1 1.2E-10 4E-15 108.9 9.2 102 2-103 40-154 (477)
137 2fbn_A 70 kDa peptidylprolyl i 99.1 4.5E-10 1.5E-14 91.6 11.6 95 3-97 89-184 (198)
138 2ond_A Cleavage stimulation fa 99.1 1.3E-09 4.5E-14 95.2 15.3 106 3-108 51-172 (308)
139 1pc2_A Mitochondria fission pr 99.1 6.7E-10 2.3E-14 87.2 11.7 105 16-120 12-121 (152)
140 3ro2_A PINS homolog, G-protein 99.1 5.6E-10 1.9E-14 96.2 12.5 117 3-119 6-138 (338)
141 3rkv_A Putative peptidylprolyl 99.1 4.6E-10 1.6E-14 88.5 10.9 86 3-88 64-150 (162)
142 2if4_A ATFKBP42; FKBP-like, al 99.1 8.8E-11 3E-15 104.7 6.9 102 4-105 232-334 (338)
143 2kck_A TPR repeat; tetratricop 99.1 1.6E-10 5.6E-15 83.9 7.2 88 32-119 2-92 (112)
144 3edt_B KLC 2, kinesin light ch 99.1 6.7E-10 2.3E-14 93.7 12.0 97 3-99 86-198 (283)
145 2lni_A Stress-induced-phosphop 99.1 7.1E-10 2.4E-14 83.1 10.8 83 3-85 51-133 (133)
146 3sf4_A G-protein-signaling mod 99.1 5.7E-10 1.9E-14 99.5 11.9 118 2-119 9-142 (406)
147 1ouv_A Conserved hypothetical 99.1 3.4E-09 1.2E-13 90.3 16.1 109 2-116 6-122 (273)
148 1dce_A Protein (RAB geranylger 99.1 1.8E-09 6.3E-14 102.9 15.6 116 3-118 64-192 (567)
149 3k9i_A BH0479 protein; putativ 99.1 7.8E-10 2.7E-14 82.5 9.6 72 3-74 28-99 (117)
150 3ro3_A PINS homolog, G-protein 99.1 5.9E-10 2E-14 85.9 8.8 99 2-100 9-119 (164)
151 1ihg_A Cyclophilin 40; ppiase 99.0 1.7E-09 5.9E-14 97.7 13.1 90 3-92 274-363 (370)
152 3nf1_A KLC 1, kinesin light ch 99.0 5.4E-10 1.8E-14 95.9 9.2 118 3-120 70-211 (311)
153 3ulq_A Response regulator aspa 99.0 5.7E-10 1.9E-14 100.1 9.5 117 3-119 144-279 (383)
154 2hr2_A Hypothetical protein; a 99.0 9E-10 3.1E-14 87.4 9.5 85 36-120 11-118 (159)
155 2kc7_A BFR218_protein; tetratr 99.0 1.9E-09 6.4E-14 77.5 10.5 78 39-116 3-83 (99)
156 3nf1_A KLC 1, kinesin light ch 99.0 8E-10 2.7E-14 94.8 9.6 97 3-99 112-224 (311)
157 2c2l_A CHIP, carboxy terminus 99.0 1.1E-09 3.9E-14 94.8 10.4 116 2-117 38-182 (281)
158 1dce_A Protein (RAB geranylger 99.0 2.7E-09 9.3E-14 101.7 13.9 114 3-116 108-238 (567)
159 3u3w_A Transcriptional activat 99.0 7.4E-10 2.5E-14 96.1 9.1 97 4-100 157-267 (293)
160 3ma5_A Tetratricopeptide repea 99.0 2E-09 6.8E-14 78.3 10.0 83 2-84 7-91 (100)
161 3gw4_A Uncharacterized protein 99.0 1.1E-09 3.6E-14 88.6 9.3 98 3-100 27-137 (203)
162 3dra_A Protein farnesyltransfe 99.0 4E-09 1.4E-13 92.8 13.7 116 4-119 105-235 (306)
163 2ifu_A Gamma-SNAP; membrane fu 99.0 1.2E-09 4E-14 95.6 9.7 101 3-105 117-229 (307)
164 2qfc_A PLCR protein; TPR, HTH, 99.0 2E-09 6.9E-14 93.3 11.0 98 3-100 156-267 (293)
165 2qfc_A PLCR protein; TPR, HTH, 99.0 5.8E-09 2E-13 90.4 13.4 114 5-118 118-250 (293)
166 2r5s_A Uncharacterized protein 99.0 5.4E-09 1.8E-13 83.6 12.2 81 18-98 90-172 (176)
167 3bee_A Putative YFRE protein; 99.0 8.3E-09 2.8E-13 74.6 12.0 82 32-113 2-86 (93)
168 3dra_A Protein farnesyltransfe 99.0 4.8E-09 1.7E-13 92.3 12.9 113 4-116 69-192 (306)
169 4f3v_A ESX-1 secretion system 99.0 4.3E-09 1.5E-13 91.3 12.2 104 4-108 137-245 (282)
170 1na0_A Designed protein CTPR3; 99.0 8E-09 2.7E-13 76.0 12.1 82 3-84 44-125 (125)
171 1ouv_A Conserved hypothetical 99.0 1.8E-08 6E-13 85.8 15.9 105 4-114 40-156 (273)
172 4g1t_A Interferon-induced prot 99.0 1.1E-08 3.7E-13 93.7 15.5 114 4-117 138-294 (472)
173 3ro3_A PINS homolog, G-protein 99.0 2.8E-09 9.6E-14 82.0 9.8 99 3-101 50-160 (164)
174 3u3w_A Transcriptional activat 99.0 1.4E-09 4.9E-14 94.2 8.9 112 7-118 120-250 (293)
175 3ulq_A Response regulator aspa 99.0 1.2E-09 4E-14 98.1 8.3 114 6-119 107-239 (383)
176 2dba_A Smooth muscle cell asso 99.0 7.6E-09 2.6E-13 79.0 11.4 90 31-120 23-115 (148)
177 3dss_A Geranylgeranyl transfer 98.9 2.2E-08 7.5E-13 89.0 15.6 111 3-113 109-236 (331)
178 1elw_A TPR1-domain of HOP; HOP 98.9 7.4E-09 2.5E-13 75.5 10.7 86 35-120 3-88 (118)
179 2ifu_A Gamma-SNAP; membrane fu 98.9 1.4E-09 4.8E-14 95.2 7.5 101 3-104 77-189 (307)
180 3q15_A PSP28, response regulat 98.9 1.1E-08 3.7E-13 91.7 13.3 101 2-102 182-293 (378)
181 3sf4_A G-protein-signaling mod 98.9 2.2E-09 7.5E-14 95.6 8.7 97 4-100 189-297 (406)
182 3q15_A PSP28, response regulat 98.9 4.8E-09 1.6E-13 94.0 10.8 119 2-120 141-277 (378)
183 3qou_A Protein YBBN; thioredox 98.9 6.8E-09 2.3E-13 90.1 11.1 89 10-98 193-283 (287)
184 3dss_A Geranylgeranyl transfer 98.9 4E-08 1.4E-12 87.3 16.0 116 3-118 65-193 (331)
185 1zu2_A Mitochondrial import re 98.9 5.6E-09 1.9E-13 82.7 9.2 69 2-70 36-125 (158)
186 3rjv_A Putative SEL1 repeat pr 98.9 1.2E-08 4.1E-13 84.4 11.5 94 3-101 19-120 (212)
187 3rjv_A Putative SEL1 repeat pr 98.9 1.1E-08 3.8E-13 84.6 11.2 111 2-116 50-174 (212)
188 2kat_A Uncharacterized protein 98.9 1.6E-08 5.6E-13 74.7 11.0 84 2-85 19-104 (115)
189 2xev_A YBGF; tetratricopeptide 98.9 2.4E-08 8.1E-13 74.7 11.9 80 3-82 40-122 (129)
190 4a1s_A PINS, partner of inscut 98.9 1.8E-09 6.2E-14 97.0 6.3 98 4-101 225-334 (411)
191 3q7a_A Farnesyltransferase alp 98.9 4.8E-08 1.6E-12 87.3 15.5 111 9-119 60-174 (349)
192 3q7a_A Farnesyltransferase alp 98.9 2.7E-08 9.2E-13 88.9 13.4 115 3-117 89-214 (349)
193 3n71_A Histone lysine methyltr 98.9 2.5E-08 8.5E-13 93.3 13.4 116 4-119 311-450 (490)
194 3ro2_A PINS homolog, G-protein 98.8 3.8E-09 1.3E-13 91.0 7.0 118 3-120 184-319 (338)
195 2v5f_A Prolyl 4-hydroxylase su 98.8 4.9E-08 1.7E-12 71.7 11.2 76 2-77 5-87 (104)
196 3qww_A SET and MYND domain-con 98.8 2.4E-08 8.2E-13 92.0 11.5 109 5-113 301-430 (433)
197 3gw4_A Uncharacterized protein 98.8 1.5E-08 5.1E-13 81.7 8.7 116 3-119 67-195 (203)
198 1elr_A TPR2A-domain of HOP; HO 98.8 1.4E-08 4.9E-13 75.4 7.9 85 35-119 3-94 (131)
199 4f3v_A ESX-1 secretion system 98.8 1.7E-08 5.8E-13 87.5 9.4 115 5-120 105-224 (282)
200 2v5f_A Prolyl 4-hydroxylase su 98.8 9.9E-08 3.4E-12 70.0 12.2 86 35-120 4-96 (104)
201 2ooe_A Cleavage stimulation fa 98.8 4.9E-08 1.7E-12 91.5 12.5 114 3-116 322-437 (530)
202 1nzn_A CGI-135 protein, fissio 98.8 1.3E-07 4.4E-12 71.7 12.2 107 13-119 12-123 (126)
203 2ooe_A Cleavage stimulation fa 98.8 1.5E-07 5.1E-12 88.2 15.2 106 3-108 273-394 (530)
204 3qwp_A SET and MYND domain-con 98.7 1.1E-07 3.6E-12 87.6 13.6 109 4-112 289-418 (429)
205 1klx_A Cysteine rich protein B 98.7 3.3E-07 1.1E-11 70.6 11.8 89 8-100 31-127 (138)
206 3ly7_A Transcriptional activat 98.6 6.4E-07 2.2E-11 80.2 14.9 101 3-104 197-344 (372)
207 1hz4_A MALT regulatory protein 98.6 2.3E-07 7.8E-12 82.4 11.0 98 5-102 56-167 (373)
208 2xm6_A Protein corresponding t 98.5 5.2E-07 1.8E-11 83.7 12.2 106 4-113 330-449 (490)
209 1hz4_A MALT regulatory protein 98.5 6E-07 2E-11 79.7 11.6 97 4-100 95-204 (373)
210 2xm6_A Protein corresponding t 98.5 3E-06 1E-10 78.5 15.9 106 3-114 40-157 (490)
211 3e4b_A ALGK; tetratricopeptide 98.5 1.5E-06 5E-11 80.3 13.4 106 4-114 178-293 (452)
212 3bee_A Putative YFRE protein; 98.5 8.2E-07 2.8E-11 63.9 8.9 68 2-69 6-76 (93)
213 3n71_A Histone lysine methyltr 98.5 3.5E-07 1.2E-11 85.5 8.7 99 2-100 351-465 (490)
214 1klx_A Cysteine rich protein B 98.4 3.3E-06 1.1E-10 64.9 11.2 93 15-115 8-104 (138)
215 3u64_A Protein TP_0956; tetrat 98.4 1.8E-06 6.3E-11 74.6 10.5 87 17-103 178-273 (301)
216 3e4b_A ALGK; tetratricopeptide 98.4 2.6E-06 8.9E-11 78.5 12.4 99 6-113 217-327 (452)
217 3mv2_B Coatomer subunit epsilo 98.4 4.1E-06 1.4E-10 73.5 12.9 99 4-102 102-210 (310)
218 3o48_A Mitochondria fission 1 98.4 8.8E-06 3E-10 61.8 12.6 101 19-120 24-128 (134)
219 1pc2_A Mitochondria fission pr 98.4 2.1E-06 7E-11 67.3 9.2 77 3-79 33-114 (152)
220 1y8m_A FIS1; mitochondria, unk 98.3 2.8E-05 9.5E-10 59.8 14.3 88 33-120 36-127 (144)
221 3gla_A Low molecular weight he 98.3 6.2E-06 2.1E-10 60.0 9.3 79 174-252 5-98 (100)
222 1xi4_A Clathrin heavy chain; a 98.2 8.1E-06 2.8E-10 83.8 12.4 107 3-117 1196-1327(1630)
223 1b89_A Protein (clathrin heavy 98.2 3.9E-06 1.3E-10 77.0 9.0 105 4-118 124-255 (449)
224 4b4t_Q 26S proteasome regulato 98.2 9.4E-06 3.2E-10 73.1 11.2 98 4-101 57-206 (434)
225 3mv2_B Coatomer subunit epsilo 98.2 1.2E-05 4E-10 70.6 10.7 99 9-112 183-295 (310)
226 4fei_A Heat shock protein-rela 98.2 1.6E-05 5.6E-10 58.0 9.8 80 174-253 7-96 (102)
227 2k8q_A Protein SHQ1; beta-sand 98.1 2.3E-06 7.9E-11 65.0 4.8 81 175-260 5-91 (134)
228 3ffl_A Anaphase-promoting comp 98.1 1.3E-05 4.5E-10 63.3 9.0 109 4-113 22-164 (167)
229 1xi4_A Clathrin heavy chain; a 98.0 2.5E-05 8.7E-10 80.2 11.9 79 34-118 1103-1181(1630)
230 3aab_A Putative uncharacterize 98.0 2.6E-05 8.9E-10 59.0 9.0 80 174-253 25-117 (123)
231 3eud_A Protein SHQ1; CS domain 98.0 3.6E-05 1.2E-09 56.5 8.5 81 175-260 19-105 (115)
232 4b4t_Q 26S proteasome regulato 98.0 2E-05 6.9E-10 70.9 9.0 97 3-99 136-245 (434)
233 2wj5_A Heat shock protein beta 97.9 6.5E-05 2.2E-09 54.7 8.6 79 175-253 3-90 (101)
234 1gme_A Heat shock protein 16.9 97.9 7.6E-05 2.6E-09 58.5 9.1 80 174-253 44-139 (151)
235 4eld_A MJ16.5-P1, small heat s 97.8 0.00012 4.1E-09 57.9 9.2 78 176-253 59-152 (161)
236 3u64_A Protein TP_0956; tetrat 97.8 0.0003 1E-08 60.8 12.2 81 32-112 148-247 (301)
237 3qwp_A SET and MYND domain-con 97.7 9E-05 3.1E-09 68.0 7.9 81 2-82 329-425 (429)
238 1nzn_A CGI-135 protein, fissio 97.7 0.00021 7.2E-09 54.0 8.5 77 3-79 36-117 (126)
239 3qww_A SET and MYND domain-con 97.6 7.3E-05 2.5E-09 68.7 6.7 70 2-71 340-422 (433)
240 3l1e_A Alpha-crystallin A chai 97.6 0.00028 9.5E-09 51.8 7.9 78 176-253 5-91 (106)
241 3ly7_A Transcriptional activat 97.5 0.00071 2.4E-08 60.5 11.0 67 5-72 280-346 (372)
242 3q9p_A Heat shock protein beta 97.5 0.00089 3E-08 47.0 9.3 73 179-251 3-84 (85)
243 3o48_A Mitochondria fission 1 97.4 0.0012 4.2E-08 50.0 10.0 80 3-82 41-124 (134)
244 1y8m_A FIS1; mitochondria, unk 97.4 0.0016 5.5E-08 50.0 10.7 77 3-79 40-120 (144)
245 4e6h_A MRNA 3'-END-processing 97.4 0.0012 3.9E-08 64.1 12.3 60 5-64 346-406 (679)
246 1b89_A Protein (clathrin heavy 97.4 0.00061 2.1E-08 62.5 9.1 114 4-119 150-297 (449)
247 2y1y_A Alpha-crystallin B chai 97.4 0.00049 1.7E-08 48.8 6.6 74 180-253 3-85 (90)
248 4h7y_A Dual specificity protei 97.3 0.0043 1.5E-07 48.1 12.0 103 3-106 14-130 (161)
249 4e6h_A MRNA 3'-END-processing 97.3 0.0013 4.5E-08 63.7 11.4 98 5-102 437-536 (679)
250 2ff4_A Probable regulatory pro 97.3 0.004 1.4E-07 56.1 13.6 95 4-98 117-233 (388)
251 2klr_A Alpha-crystallin B chai 97.2 0.00083 2.8E-08 53.8 7.1 78 176-253 66-152 (175)
252 3ffl_A Anaphase-promoting comp 96.9 0.0041 1.4E-07 49.0 8.3 77 3-80 64-165 (167)
253 2bol_A TSP36, small heat shock 96.8 0.0054 1.9E-07 53.6 8.9 80 174-253 99-190 (314)
254 4gns_B Protein CSD3, chitin bi 96.8 0.0034 1.2E-07 61.3 8.3 61 37-97 338-398 (754)
255 2uy1_A Cleavage stimulation fa 96.7 0.036 1.2E-06 51.5 14.4 101 4-106 215-356 (493)
256 2uy1_A Cleavage stimulation fa 96.2 0.094 3.2E-06 48.6 14.2 91 5-96 289-380 (493)
257 1zbp_A Hypothetical protein VP 95.9 0.12 4E-06 44.0 12.2 63 9-71 4-66 (273)
258 4gns_B Protein CSD3, chitin bi 95.9 0.02 7E-07 55.8 8.4 57 5-61 340-396 (754)
259 3txn_A 26S proteasome regulato 95.8 0.097 3.3E-06 47.2 11.6 93 7-99 104-210 (394)
260 4b4t_R RPN7, 26S proteasome re 95.6 0.061 2.1E-06 49.0 10.0 98 4-101 133-239 (429)
261 3kae_A CDC27, possible protein 95.6 0.36 1.2E-05 38.3 12.6 91 8-103 39-147 (242)
262 4g26_A Pentatricopeptide repea 95.3 0.38 1.3E-05 44.6 14.3 102 5-106 108-213 (501)
263 1ya0_A SMG-7 transcript varian 94.5 0.29 9.8E-06 45.5 11.1 78 39-116 155-232 (497)
264 1zbp_A Hypothetical protein VP 94.4 0.17 5.8E-06 43.0 8.4 64 44-107 5-68 (273)
265 1ya0_A SMG-7 transcript varian 94.3 0.26 8.9E-06 45.7 10.3 77 5-81 155-231 (497)
266 2ff4_A Probable regulatory pro 94.1 0.2 6.9E-06 44.9 9.0 60 5-64 174-233 (388)
267 4b4t_P 26S proteasome regulato 93.7 0.88 3E-05 41.5 12.6 94 6-99 141-247 (445)
268 4h7y_A Dual specificity protei 93.7 0.51 1.7E-05 36.5 9.1 71 13-84 71-141 (161)
269 4g26_A Pentatricopeptide repea 93.0 1.6 5.3E-05 40.4 13.3 90 16-105 84-177 (501)
270 2bol_A TSP36, small heat shock 92.8 0.4 1.4E-05 41.7 8.3 71 181-251 231-313 (314)
271 4fhn_B Nucleoporin NUP120; pro 92.5 0.52 1.8E-05 48.3 10.0 92 6-97 846-965 (1139)
272 3mkq_B Coatomer subunit alpha; 92.2 1.1 3.8E-05 35.5 9.6 89 5-98 8-117 (177)
273 3mkq_A Coatomer beta'-subunit; 91.9 0.87 3E-05 43.8 10.4 84 9-97 659-763 (814)
274 3kae_A CDC27, possible protein 89.7 4.2 0.00014 32.2 10.3 88 2-97 2-89 (242)
275 2w2u_A Hypothetical P60 katani 89.3 1.6 5.4E-05 30.0 7.0 30 2-31 19-48 (83)
276 2v6y_A AAA family ATPase, P60 88.8 1.9 6.4E-05 29.6 7.1 29 3-31 12-40 (83)
277 3mkq_A Coatomer beta'-subunit; 88.7 4.9 0.00017 38.5 12.6 89 4-103 683-779 (814)
278 4b4t_S RPN3, 26S proteasome re 87.7 1.7 6E-05 40.3 8.2 69 36-104 231-304 (523)
279 3spa_A Mtrpol, DNA-directed RN 87.7 11 0.00037 38.2 14.2 94 5-100 130-231 (1134)
280 3mkq_B Coatomer subunit alpha; 87.2 5 0.00017 31.7 9.6 85 3-95 35-127 (177)
281 1wy6_A Hypothetical protein ST 85.9 6.5 0.00022 30.0 9.0 53 14-66 103-155 (172)
282 3txn_A 26S proteasome regulato 85.8 13 0.00045 33.2 12.7 60 41-100 104-169 (394)
283 2ijq_A Hypothetical protein; s 85.4 5.9 0.0002 30.7 8.9 27 6-32 36-62 (161)
284 2cfu_A SDSA1; SDS-hydrolase, l 84.1 1.9 6.7E-05 41.3 6.9 51 36-86 449-499 (658)
285 4a5x_A MITD1, MIT domain-conta 83.8 5.6 0.00019 27.3 7.4 30 2-31 16-45 (86)
286 1wfd_A Hypothetical protein 15 80.8 8 0.00027 26.9 7.4 30 2-31 15-44 (93)
287 2v6x_A Vacuolar protein sortin 80.5 2.2 7.6E-05 29.2 4.3 27 4-30 15-41 (85)
288 3ax2_A Mitochondrial import re 80.3 3.7 0.00013 27.4 5.1 33 6-38 21-53 (73)
289 2cpt_A SKD1 protein, vacuolar 79.6 2.2 7.6E-05 31.3 4.3 13 18-30 15-27 (117)
290 4b4t_R RPN7, 26S proteasome re 79.6 3.8 0.00013 37.0 6.8 64 36-99 131-197 (429)
291 3lpz_A GET4 (YOR164C homolog); 78.7 31 0.0011 30.0 12.0 26 68-93 134-159 (336)
292 1qsa_A Protein (soluble lytic 77.3 7 0.00024 37.2 8.1 80 18-98 268-347 (618)
293 1qsa_A Protein (soluble lytic 77.2 18 0.00061 34.4 10.9 113 6-119 218-334 (618)
294 2vkj_A TM1634; membrane protei 76.4 9.7 0.00033 26.3 6.3 28 4-31 55-82 (106)
295 2wpv_A GET4, UPF0363 protein Y 76.3 33 0.0011 29.5 11.4 27 68-94 132-158 (312)
296 3mv2_A Coatomer subunit alpha; 75.0 18 0.0006 31.4 9.2 102 5-106 117-243 (325)
297 2ynq_A ESSB; membrane protein, 73.5 23 0.00079 27.3 8.6 86 4-95 10-98 (161)
298 3ax2_A Mitochondrial import re 73.3 11 0.00037 25.1 5.9 37 74-110 21-57 (73)
299 3t5v_B Nuclear mRNA export pro 73.1 7.3 0.00025 35.6 6.7 88 16-103 140-254 (455)
300 2cwy_A Hypothetical protein TT 72.4 8.8 0.0003 26.8 5.6 29 6-34 5-33 (94)
301 3t5x_A PCI domain-containing p 71.5 9.7 0.00033 30.6 6.5 50 5-54 17-71 (203)
302 4b4t_S RPN3, 26S proteasome re 71.0 21 0.00071 33.1 9.3 59 8-68 237-302 (523)
303 2p58_C Putative type III secre 70.2 27 0.00091 24.9 9.1 17 76-92 46-62 (116)
304 2crb_A Nuclear receptor bindin 69.1 6.7 0.00023 27.3 4.2 25 38-62 17-41 (97)
305 3mkr_B Coatomer subunit alpha; 69.0 56 0.0019 28.2 11.8 100 5-104 105-232 (320)
306 4fhn_B Nucleoporin NUP120; pro 69.0 32 0.0011 35.1 11.1 91 9-103 819-932 (1139)
307 2uwj_G Type III export protein 67.7 28 0.00095 24.8 7.2 29 29-57 32-60 (115)
308 2crb_A Nuclear receptor bindin 66.8 9.4 0.00032 26.6 4.6 22 74-95 19-40 (97)
309 4gq2_M Nucleoporin NUP120; bet 66.6 27 0.00091 34.9 9.8 26 73-98 900-925 (950)
310 4gq2_M Nucleoporin NUP120; bet 65.6 43 0.0015 33.4 11.1 50 10-63 818-867 (950)
311 2yhe_A SEC-alkyl sulfatase; hy 69.0 1.3 4.4E-05 42.6 0.0 52 37-88 462-513 (668)
312 1om2_A Protein (mitochondrial 64.4 6.7 0.00023 27.5 3.5 30 6-35 24-53 (95)
313 4aez_C MAD3, mitotic spindle c 64.4 57 0.0019 26.6 10.7 48 53-100 131-180 (223)
314 2rpa_A Katanin P60 ATPase-cont 64.3 6.5 0.00022 26.5 3.3 27 5-31 15-41 (78)
315 2ijq_A Hypothetical protein; s 63.9 40 0.0014 26.0 8.3 60 39-98 35-103 (161)
316 3t5x_A PCI domain-containing p 60.6 15 0.0005 29.5 5.5 35 36-70 14-48 (203)
317 2cfu_A SDSA1; SDS-hydrolase, l 60.5 20 0.00069 34.2 7.4 60 60-120 440-499 (658)
318 2rpa_A Katanin P60 ATPase-cont 59.9 30 0.001 23.2 6.1 26 73-98 15-40 (78)
319 2w2u_A Hypothetical P60 katani 56.2 43 0.0015 22.6 6.9 16 81-96 30-45 (83)
320 1om2_A Protein (mitochondrial 55.2 17 0.00058 25.4 4.3 31 75-105 25-55 (95)
321 4b4t_P 26S proteasome regulato 55.0 98 0.0034 27.7 10.7 62 4-65 179-247 (445)
322 2dl1_A Spartin; SPG20, MIT, st 53.7 31 0.0011 25.0 5.6 43 51-101 18-60 (116)
323 3re2_A Predicted protein; meni 51.6 26 0.00089 31.0 5.7 25 38-62 298-322 (472)
324 4a5x_A MITD1, MIT domain-conta 50.2 57 0.0019 22.1 6.5 16 81-96 27-42 (86)
325 2v6y_A AAA family ATPase, P60 48.8 58 0.002 21.8 7.1 30 88-117 36-65 (83)
326 3u84_A Menin; MLL, JUND, ledgf 48.6 30 0.001 31.2 5.7 44 21-64 298-346 (550)
327 3qnk_A Putative lipoprotein; a 47.2 68 0.0023 29.4 8.4 64 36-99 109-211 (517)
328 3t5v_B Nuclear mRNA export pro 45.3 30 0.001 31.5 5.5 59 10-68 184-253 (455)
329 1wfd_A Hypothetical protein 15 44.3 75 0.0026 21.8 6.5 7 95-101 47-53 (93)
330 3jq1_A SUSD superfamily protei 43.5 62 0.0021 29.3 7.5 63 36-98 110-208 (481)
331 3ph0_C ASCG; type III secretio 41.5 64 0.0022 20.2 6.2 50 40-90 10-60 (61)
332 3hdx_A SUSD homolog, SUSD supe 41.5 81 0.0028 28.5 7.9 64 36-99 112-226 (478)
333 3spa_A Mtrpol, DNA-directed RN 40.2 2E+02 0.0069 29.2 10.8 69 38-106 129-203 (1134)
334 4a1g_A Mitotic checkpoint seri 39.9 1.2E+02 0.0041 23.0 7.5 48 53-100 82-131 (152)
335 2pmr_A Uncharacterized protein 39.2 27 0.00092 24.0 3.2 38 18-63 29-66 (87)
336 2v6x_A Vacuolar protein sortin 38.4 87 0.003 20.9 6.5 13 50-62 27-39 (85)
337 2oo2_A Hypothetical protein AF 38.4 28 0.00097 23.8 3.2 22 39-60 38-59 (86)
338 3otn_A SUSD superfamily protei 38.1 79 0.0027 28.6 7.3 64 36-99 116-226 (482)
339 2vkj_A TM1634; membrane protei 38.0 97 0.0033 21.3 6.4 48 70-117 53-103 (106)
340 3myv_A SUSD superfamily protei 38.0 73 0.0025 28.6 7.0 47 52-98 164-218 (454)
341 2cpt_A SKD1 protein, vacuolar 38.0 44 0.0015 24.2 4.5 10 54-63 17-26 (117)
342 4b4t_O 26S proteasome regulato 37.7 2.1E+02 0.0071 25.1 11.2 87 12-98 86-197 (393)
343 2ymb_A MITD1, MIT domain-conta 37.1 7.1 0.00024 32.7 0.0 28 4-31 25-52 (257)
344 3kez_A Putative sugar binding 36.6 79 0.0027 28.4 7.0 47 52-98 170-224 (461)
345 3dza_A Uncharacterized putativ 36.6 86 0.003 24.8 6.2 61 4-64 110-178 (191)
346 2cwy_A Hypothetical protein TT 36.6 1E+02 0.0035 21.2 6.0 57 40-98 5-67 (94)
347 4gq4_A Menin; tumor suppressor 36.2 61 0.0021 29.2 5.7 25 38-62 305-329 (489)
348 3i4g_A SUSD-like carbohydrate 35.1 1.3E+02 0.0043 27.7 8.2 63 36-98 123-226 (528)
349 3myv_A SUSD superfamily protei 34.3 1E+02 0.0034 27.7 7.3 47 18-64 164-218 (454)
350 3mcx_A SUSD superfamily protei 34.0 89 0.003 28.2 6.9 48 52-99 176-231 (477)
351 2xze_A STAM-binding protein; h 34.0 48 0.0016 25.0 4.3 30 2-31 40-69 (146)
352 3kez_A Putative sugar binding 31.0 1.2E+02 0.0039 27.3 7.1 30 36-65 196-225 (461)
353 3lew_A SUSD-like carbohydrate 30.9 1.1E+02 0.0036 27.9 6.9 48 52-99 174-232 (495)
354 3mcx_A SUSD superfamily protei 30.8 1.2E+02 0.0041 27.2 7.2 49 18-66 176-232 (477)
355 3lew_A SUSD-like carbohydrate 29.8 1.3E+02 0.0043 27.4 7.2 31 36-66 203-233 (495)
356 4gq4_A Menin; tumor suppressor 29.7 1.9E+02 0.0064 26.1 7.7 44 69-112 302-351 (489)
357 2br9_A 14-3-3E, 14-3-3 protein 29.7 1.6E+02 0.0056 24.0 7.1 15 49-63 186-200 (234)
358 2e2a_A Protein (enzyme IIA); h 28.6 72 0.0025 22.6 4.1 29 2-30 20-48 (105)
359 2uwj_G Type III export protein 28.4 1.6E+02 0.0055 20.9 7.4 76 39-120 9-84 (115)
360 2kq1_A BH0266 protein; solutio 28.2 22 0.00075 25.7 1.4 23 231-253 78-100 (119)
361 1wcr_A PTS system, N, N'-diace 28.1 75 0.0026 22.4 4.1 29 2-30 18-46 (103)
362 2p58_C Putative type III secre 28.0 1.6E+02 0.0056 20.9 8.7 73 15-93 20-92 (116)
363 3isy_A Bsupi, intracellular pr 27.8 89 0.003 22.7 4.6 50 180-229 15-67 (120)
364 2dl1_A Spartin; SPG20, MIT, st 27.1 86 0.003 22.7 4.3 79 15-120 16-94 (116)
365 3esl_A Checkpoint serine/threo 26.9 2.4E+02 0.0082 22.4 12.0 77 23-100 58-145 (202)
366 3k1s_A PTS system, cellobiose- 26.5 82 0.0028 22.5 4.1 29 2-30 22-50 (109)
367 2zan_A Vacuolar protein sortin 26.2 14 0.00048 33.3 0.0 30 2-31 11-40 (444)
368 2yhe_A SEC-alkyl sulfatase; hy 32.2 14 0.00048 35.4 0.0 51 70-120 461-511 (668)
369 2jpu_A ORF C02003 protein; sol 26.0 88 0.003 23.1 4.3 30 2-31 7-36 (129)
370 2npm_A 14-3-3 domain containin 25.8 2E+02 0.007 23.8 7.1 24 40-63 201-225 (260)
371 4fm3_A Uncharacterized hypothe 25.5 1.7E+02 0.006 20.4 7.6 24 4-27 36-59 (98)
372 3re2_A Predicted protein; meni 25.2 1.2E+02 0.0042 26.7 5.7 44 55-98 276-324 (472)
373 3l8r_A PTCA, putative PTS syst 25.2 88 0.003 22.8 4.1 28 2-29 37-64 (120)
374 1wy6_A Hypothetical protein ST 25.0 2.3E+02 0.0078 21.5 10.0 53 48-100 103-155 (172)
375 3ckc_A SUSD; TPR repeat, carbo 24.8 2.3E+02 0.0078 25.5 8.0 63 36-98 129-231 (527)
376 3uzd_A 14-3-3 protein gamma; s 24.6 2.3E+02 0.0078 23.4 7.1 9 83-91 187-195 (248)
377 3jys_A SUSD superfamily protei 24.3 2.1E+02 0.0073 25.9 7.6 62 36-97 120-221 (499)
378 3ubw_A 14-3-3E, 14-3-3 protein 24.2 2.3E+02 0.0079 23.5 7.1 13 50-62 213-225 (261)
379 2qx5_A Nucleoporin NIC96; mRNA 24.2 1.7E+02 0.0059 27.8 7.1 25 78-103 546-570 (661)
380 2o8p_A 14-3-3 domain containin 24.1 2.9E+02 0.0099 22.4 9.4 50 15-64 138-196 (227)
381 3u84_A Menin; MLL, JUND, ledgf 23.4 1.4E+02 0.0047 27.0 5.7 30 69-98 317-346 (550)
382 3snx_A SUSD homolog, putative 23.1 1.6E+02 0.0056 26.4 6.6 48 52-99 160-220 (460)
383 3lxu_X Tripeptidyl-peptidase 2 22.7 3.3E+02 0.011 28.4 9.1 67 36-102 1241-1316(1354)
384 2rkl_A Vacuolar protein sortin 22.0 1.5E+02 0.005 18.2 4.1 26 5-30 23-48 (53)
385 3iqu_A 14-3-3 protein sigma; s 21.9 2.5E+02 0.0084 22.9 6.7 15 49-63 189-203 (236)
386 4fei_A Heat shock protein-rela 21.9 1.8E+02 0.0062 19.8 5.3 42 218-260 16-57 (102)
387 2npu_A FKBP12-rapamycin comple 21.9 2.4E+02 0.0081 20.6 6.1 52 10-64 48-102 (126)
388 4a1g_A Mitotic checkpoint seri 21.9 2.6E+02 0.0089 21.1 9.1 49 21-69 84-134 (152)
389 2wvi_A Mitotic checkpoint seri 21.4 2.8E+02 0.0095 21.2 9.2 63 21-83 79-143 (164)
390 3iv0_A SUSD homolog; NP_809186 21.1 2.9E+02 0.0098 24.8 7.8 62 36-97 125-239 (481)
391 3lxu_X Tripeptidyl-peptidase 2 20.8 7.3E+02 0.025 25.9 11.4 84 2-86 1241-1333(1354)
392 3esl_A Checkpoint serine/threo 20.6 3.2E+02 0.011 21.7 11.4 53 17-69 94-148 (202)
393 3vtt_A Envelope protein E; imm 20.2 22 0.00075 25.3 0.0 14 172-185 92-105 (107)
394 3qnk_A Putative lipoprotein; a 20.2 2.3E+02 0.0079 25.7 7.1 30 36-65 182-211 (517)
No 1
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.91 E-value=1.2e-24 Score=158.91 Aligned_cols=91 Identities=77% Similarity=1.247 Sum_probs=85.8
Q ss_pred CCCCcccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCCCceeeeccccccccccCcceEEEeCcEEEEEEeec
Q 023518 172 PKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKA 251 (281)
Q Consensus 172 ~k~r~~w~Qt~~~V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~~~~s~~~v~~~kiei~L~K~ 251 (281)
+++||+||||.++|+|+|+++|+.++++.|+|++++|+|.+...++..|.++++||++|+|++|+|++.+++|||+|+|+
T Consensus 1 ~~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~ 80 (92)
T 2xcm_C 1 AKYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKA 80 (92)
T ss_dssp CCSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTTSCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBS
T ss_pred CCccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCCCcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcC
Confidence 36799999999999999999999999999999999999998776677899999999999999999999999999999999
Q ss_pred CCCCCCccccC
Q 023518 252 EPIQWSSLEFS 262 (281)
Q Consensus 252 ~~~~W~~l~~~ 262 (281)
++..|++|+++
T Consensus 81 ~~~~W~~L~~~ 91 (92)
T 2xcm_C 81 DIITWASLEHG 91 (92)
T ss_dssp SSCCCSCSBTT
T ss_pred CCCcchhcccC
Confidence 98999999865
No 2
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.90 E-value=2.6e-24 Score=166.69 Aligned_cols=93 Identities=26% Similarity=0.478 Sum_probs=86.2
Q ss_pred CCCCcccccC-CCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCCCc------------eeeeccccccccccCcceEE
Q 023518 172 PKYRHEFYQK-PEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEE------------AYHFQPRLFGKIIPAKCRYE 238 (281)
Q Consensus 172 ~k~r~~w~Qt-~~~V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~~~------------~~~~~~~L~~~I~~~~s~~~ 238 (281)
..+||+|||| .+.|+|+|++|++.+++++|+|++++|+|.+...++. .|.++++||++|+|++|+|+
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~ 97 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFC 97 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEE
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEE
Confidence 4689999999 9999999999999999999999999999999776554 79999999999999999999
Q ss_pred EeCcEEEEEEeecCCCCCCccccCcC
Q 023518 239 VLSTKVEIRLAKAEPIQWSSLEFSKG 264 (281)
Q Consensus 239 v~~~kiei~L~K~~~~~W~~l~~~~~ 264 (281)
|.++||||+|+|++...|++|++...
T Consensus 98 v~~~kIeI~L~K~e~~~W~~L~~~~~ 123 (134)
T 1wh0_A 98 FTASRIDICLRKRQSQRWGGLEAPAA 123 (134)
T ss_dssp ECSSEEEEEEEESSSCCCSCSBCCCS
T ss_pred EeCCEEEEEEEECCCCccccccccCc
Confidence 99999999999999999999997653
No 3
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.90 E-value=6.2e-24 Score=161.27 Aligned_cols=104 Identities=33% Similarity=0.615 Sum_probs=87.6
Q ss_pred CCCCCcccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCCCceeeeccccccccccCcceEEEeCcEEEEEEee
Q 023518 171 RPKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAK 250 (281)
Q Consensus 171 ~~k~r~~w~Qt~~~V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~~~~s~~~v~~~kiei~L~K 250 (281)
.+.+||+|+||.+.|+|+|+++|+.++++.|+|++++|+|.+...+|..|.++++||++|+|++|+|++.+++|+|+|+|
T Consensus 7 ~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K 86 (114)
T 1rl1_A 7 QSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKK 86 (114)
T ss_dssp -CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSSSEEEEEEC
T ss_pred CCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEeeCCCcCCccccEEEEECCEEEEEEEc
Confidence 45679999999999999999999999999999999999999887777789999999999999999999999999999999
Q ss_pred cCCCCCCccccCcCcCCCCcCCCC
Q 023518 251 AEPIQWSSLEFSKGAVVPQRVNPP 274 (281)
Q Consensus 251 ~~~~~W~~l~~~~~~~~~~~~~~~ 274 (281)
++...|++|++...+..+++.++.
T Consensus 87 ~~~~~W~~L~~~~~~~~~~~i~~~ 110 (114)
T 1rl1_A 87 PEAVRWEKLEGQGDVPTPKQFVAD 110 (114)
T ss_dssp SSCCCCSSSBTTC-----------
T ss_pred CCCCcCccccccCCccCCcccCCC
Confidence 998999999988877777665543
No 4
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=2.2e-23 Score=160.98 Aligned_cols=90 Identities=20% Similarity=0.254 Sum_probs=83.8
Q ss_pred CCcccccCCCeEEEEEEecCC---CCcceEEEEeeeEEEEEEEcCCCceeeeccc-cccccccCcceEEEeCcEEEEEEe
Q 023518 174 YRHEFYQKPEEVVVTVFAKGI---PAKNVTVDFGEQILSVSIDVPGEEAYHFQPR-LFGKIIPAKCRYEVLSTKVEIRLA 249 (281)
Q Consensus 174 ~r~~w~Qt~~~V~i~v~~k~~---~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~-L~~~I~~~~s~~~v~~~kiei~L~ 249 (281)
.||+||||.++|+|+|+++|+ .++++.|+|++++|+|.+...+|..|.|+++ ||++|+|++|+|+|.+++|||+|+
T Consensus 21 ~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~kVei~L~ 100 (127)
T 1x5m_A 21 SNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCR 100 (127)
T ss_dssp CSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETTEEEEEEE
T ss_pred cEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCCEEEEEEE
Confidence 499999999999999999998 7899999999999999998777788999995 999999999999999999999999
Q ss_pred ecCC-CCCCccccCc
Q 023518 250 KAEP-IQWSSLEFSK 263 (281)
Q Consensus 250 K~~~-~~W~~l~~~~ 263 (281)
|++. ..|++|++..
T Consensus 101 K~~~~~~W~~L~~~~ 115 (127)
T 1x5m_A 101 KKVENTRWDYLTQVE 115 (127)
T ss_dssp CSSSSCCCSSSBHHH
T ss_pred ECCCCCCCCcccccc
Confidence 9987 4999998654
No 5
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.86 E-value=1.1e-20 Score=145.46 Aligned_cols=112 Identities=27% Similarity=0.476 Sum_probs=109.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
|+.+.++|+.+++.|+|++|+..|+++++.+|+++.+|.++|.||..+|++++|+.+|+++++++|++..+|+++|.+|.
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~ 92 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLV 92 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023518 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 113 (281)
.+|+|++|+.+|+++++++|++..+...++.|
T Consensus 93 ~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 93 AMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 99999999999999999999999998888776
No 6
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.84 E-value=3.8e-21 Score=147.90 Aligned_cols=89 Identities=19% Similarity=0.250 Sum_probs=82.2
Q ss_pred CcccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEc-CCCceeeeccccccccccCcceEEEeCcEEEEEEeecCC
Q 023518 175 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDV-PGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEP 253 (281)
Q Consensus 175 r~~w~Qt~~~V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~-~~~~~~~~~~~L~~~I~~~~s~~~v~~~kiei~L~K~~~ 253 (281)
+|+||||.+.|+|+|+++++ ++++|+|++++|+|.+.. .+|..|.++++||++|+|++|+|+|.+++|+|+|+|+++
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEESST
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCCCceEEEEEEccceeccccCEEEECCCEEEEEEEECCC
Confidence 89999999999999999985 799999999999999875 467789999999999999999999999999999999986
Q ss_pred -CCCCccccCcCc
Q 023518 254 -IQWSSLEFSKGA 265 (281)
Q Consensus 254 -~~W~~l~~~~~~ 265 (281)
..|++|++...+
T Consensus 83 ~~~W~rL~~~~~K 95 (125)
T 1ejf_A 83 GQSWPRLTKERAK 95 (125)
T ss_dssp TCCCSSSBSSCCC
T ss_pred CCCCCceecCCCc
Confidence 699999988765
No 7
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.84 E-value=2.9e-21 Score=152.57 Aligned_cols=89 Identities=24% Similarity=0.309 Sum_probs=82.4
Q ss_pred CCcccccCCCeEEEEEEecCCCCcceEEEEe-eeEEEEEEEcCCCceeeeccccccccccCcceEEEeCcEEEEEEeecC
Q 023518 174 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFG-EQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAE 252 (281)
Q Consensus 174 ~r~~w~Qt~~~V~i~v~~k~~~~~~~~v~~~-~~~l~~~~~~~~~~~~~~~~~L~~~I~~~~s~~~v~~~kiei~L~K~~ 252 (281)
++|+|||+.+.|+|+|+++++ ++++|+|+ +++|+|++...+|..|.++++||++|+|+ |+|+|.+++|||+|+|++
T Consensus 5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~~~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~L~K~e 81 (150)
T 2kmw_A 5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIMTE-YRKNVGLRNIIFSIQKEE 81 (150)
T ss_dssp CCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETTTTEEEEEEEEBSSCEEEE-EEEEEESSSEEEEEEECC
T ss_pred CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcCCCceEEEEeEhhhccccc-ceEEecCCEEEEEEEECC
Confidence 389999999999999999986 58999999 79999998766778899999999999999 999999999999999999
Q ss_pred CCCCCccccCcCc
Q 023518 253 PIQWSSLEFSKGA 265 (281)
Q Consensus 253 ~~~W~~l~~~~~~ 265 (281)
+..|++|++...+
T Consensus 82 ~~~W~rL~k~~~K 94 (150)
T 2kmw_A 82 RSWWTRLLKSEEK 94 (150)
T ss_dssp SSCCSCSBSCCSS
T ss_pred CCcCcccccCCcc
Confidence 9999999987765
No 8
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.83 E-value=4e-20 Score=142.02 Aligned_cols=98 Identities=16% Similarity=0.167 Sum_probs=86.2
Q ss_pred CCcccccCCCeEEEEEEec-CC-CCcceEEEEeeeEEEEEEEcCCCceeeeccccccccccCcceEEEeCcE-EEEEEee
Q 023518 174 YRHEFYQKPEEVVVTVFAK-GI-PAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTK-VEIRLAK 250 (281)
Q Consensus 174 ~r~~w~Qt~~~V~i~v~~k-~~-~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~~~~s~~~v~~~k-iei~L~K 250 (281)
.+|.|+||.++|+|+|.++ |+ +++++.|+|++++|+|.+...+|..+.++++||++|+|++|+|++.+++ |+|+|+|
T Consensus 20 ~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i~L~K 99 (124)
T 1wgv_A 20 ENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVNLSK 99 (124)
T ss_dssp SSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECTTSEEEEEECB
T ss_pred CcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEcccccCcCCCcCCEEEEeCCCEEEEEEEE
Confidence 4899999999999999975 77 7899999999999999987666767889999999999999999999987 9999999
Q ss_pred cCCCCCCccccCcCcCCCCcC
Q 023518 251 AEPIQWSSLEFSKGAVVPQRV 271 (281)
Q Consensus 251 ~~~~~W~~l~~~~~~~~~~~~ 271 (281)
++...|++|.+...+..+++.
T Consensus 100 ~~~~~W~~L~~~~~~id~~ki 120 (124)
T 1wgv_A 100 VGEYWWNAILEGEEPIDIDSG 120 (124)
T ss_dssp SSSCCCSCSBTTSCCCSCCCS
T ss_pred CCCCCCcCcccCCCccChhhc
Confidence 988999999976655544443
No 9
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.81 E-value=9.4e-20 Score=145.21 Aligned_cols=120 Identities=20% Similarity=0.147 Sum_probs=111.1
Q ss_pred ChhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-------CHH-----HHHHHHHHHHHccCHHHHHHHHHHHHHc---
Q 023518 1 MATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN-------SAE-----LFADRAQASIKLQNFTEAVADANRAIEL--- 65 (281)
Q Consensus 1 ma~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~-------~~~-----~~~~~a~~~~~l~~~~~A~~~~~~al~l--- 65 (281)
||..++..|+.++..|+|++|+..|+++|+++|+ +.. +|.++|.|+.++|+|++|+.+|++||++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4678899999999999999999999999999999 544 9999999999999999999999999999
Q ss_pred ----CCCcHHHH----HHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 66 ----EPSMSKAY----WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 66 ----~p~~~~a~----~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|++..+| +++|.++..+|+|++|+.+|+++++++|++......+..+...+...
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~ 152 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDR 152 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999999999999999999998777777776666554
No 10
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.5e-18 Score=132.04 Aligned_cols=116 Identities=31% Similarity=0.460 Sum_probs=111.6
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
++.++.+|..++..|+|++|+..|.++++.+|+++.++.++|.+|..+|+|++|+.++++++.++|++..+++.+|.++.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcC------CCChhHHHHHHHHHHHH
Q 023518 82 KLEEYETAKVALEKGASLA------PGDSRFTNLIKECEERI 117 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~------p~~~~~~~~l~~~~~~l 117 (281)
.+|++++|+.+|+++++++ |.+..+...+..+..++
T Consensus 84 ~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 84 AVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 9999999999999999999 99999999999887654
No 11
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.79 E-value=1.4e-18 Score=138.37 Aligned_cols=120 Identities=23% Similarity=0.312 Sum_probs=113.7
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc------------------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI------------------SPNSAELFADRAQASIKLQNFTEAVADANRAI 63 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~------------------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al 63 (281)
+..+..+|+.++..|+|++|+..|.+++.. +|.+..+|.++|.||+++|+|++|+.++++++
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 567899999999999999999999999999 67777999999999999999999999999999
Q ss_pred HcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh-hHHHHHHHHHHHHHhhh
Q 023518 64 ELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS-RFTNLIKECEERIAEET 121 (281)
Q Consensus 64 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~-~~~~~l~~~~~~l~~~~ 121 (281)
.++|.+..+++++|.+|+.+|+|++|+.+|+++++++|++. .+...+..+...++...
T Consensus 91 ~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~ 149 (162)
T 3rkv_A 91 KREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKK 149 (162)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHT
T ss_pred hcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 77899999998888763
No 12
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.79 E-value=8e-18 Score=134.13 Aligned_cols=120 Identities=27% Similarity=0.383 Sum_probs=113.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|.++++.+|+++.+++++|.+|..+|+|++|+.+|++++.++|++..+|+.+|.+|+
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 90 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARF 90 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChh--HHHHHHHHHHHHHhhh
Q 023518 82 KLEEYETAKVALEKGASLAPGDSR--FTNLIKECEERIAEET 121 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~--~~~~l~~~~~~l~~~~ 121 (281)
.+|+|++|+.+|+++++++|++.. +...+..++.++++..
T Consensus 91 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~ 132 (164)
T 3sz7_A 91 DMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEAN 132 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988 6677777777777763
No 13
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.78 E-value=3.1e-19 Score=138.29 Aligned_cols=93 Identities=13% Similarity=0.168 Sum_probs=75.3
Q ss_pred CCcccccCCCeEEEEEEe-cCCCCcceEEEEeeeEEEEEEEcCCCceeeeccccccccccCcceEEEeCcEEEEEEeecC
Q 023518 174 YRHEFYQKPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAE 252 (281)
Q Consensus 174 ~r~~w~Qt~~~V~i~v~~-k~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~~~~s~~~v~~~kiei~L~K~~ 252 (281)
.+|.|+||.+.|+|+|.+ +|++++++.|+|++++|+|.+. |.+ .++++||++|+|++|+|++.+++|+|+|+|+.
T Consensus 5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~---g~~-~~~~~L~~~I~~e~S~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ---GEI-VIDGELLHEVDVSSLWWVINGDVVDVNVTKKR 80 (131)
T ss_dssp CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET---TEE-EEEEEBSSCEEEEEEEEEEETTEEEEEEEESS
T ss_pred CcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC---CEe-eEccccccccccccCEEEEeCCEEEEEEEECC
Confidence 489999999999999997 7899999999999999999984 656 78999999999999999999999999999996
Q ss_pred CCCCCccccCcCcCCCCc
Q 023518 253 PIQWSSLEFSKGAVVPQR 270 (281)
Q Consensus 253 ~~~W~~l~~~~~~~~~~~ 270 (281)
...|++|.+...+..+..
T Consensus 81 ~~~W~~L~~~~~~id~~k 98 (131)
T 2o30_A 81 NEWWDSLLVGSESVDVQK 98 (131)
T ss_dssp CCCCSCSBC---------
T ss_pred CCCCccccCCCCCCCHhH
Confidence 688999987654444443
No 14
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.78 E-value=9.6e-20 Score=141.52 Aligned_cols=91 Identities=18% Similarity=0.245 Sum_probs=76.4
Q ss_pred CCcccccCCCe-------EEEEEEecCCCCcceEEEEeeeEEEEEEEcCC------CceeeeccccccccccCcceEEEe
Q 023518 174 YRHEFYQKPEE-------VVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG------EEAYHFQPRLFGKIIPAKCRYEVL 240 (281)
Q Consensus 174 ~r~~w~Qt~~~-------V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~------~~~~~~~~~L~~~I~~~~s~~~v~ 240 (281)
++|.|||+.+. |+|+|+++++ .+++|+|++++|+|.+...+ +..|.++++||++|+|++|+|++.
T Consensus 7 p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~~v~ 84 (134)
T 2cg9_X 7 PQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMHKVA 84 (134)
T ss_dssp ----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEEEEC
T ss_pred CCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECCEEEEEEecccccCCccCceEEEEEEChhhccccccEEEEC
Confidence 48999999988 9999999986 48999999999999876543 468999999999999999999999
Q ss_pred CcE-EEEEEeecC--CCCCCccccCcCcC
Q 023518 241 STK-VEIRLAKAE--PIQWSSLEFSKGAV 266 (281)
Q Consensus 241 ~~k-iei~L~K~~--~~~W~~l~~~~~~~ 266 (281)
+++ |+|+|+|++ ...|++|++...+.
T Consensus 85 ~~~~vei~L~K~~~~~~~W~rL~k~~~K~ 113 (134)
T 2cg9_X 85 NGQHYFLKLYKKDLESEYWPRLTKEKVKY 113 (134)
T ss_dssp CC--CEEEEEECSSSSCCCSCSSSSCCCC
T ss_pred CCEEEEEEEEECCCCCCCCCceecCCCcc
Confidence 999 999999998 47999999887553
No 15
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.77 E-value=1.7e-18 Score=134.27 Aligned_cols=95 Identities=17% Similarity=0.254 Sum_probs=82.7
Q ss_pred CCcccccCCCeEEEEEEec-C--CCCcceEEEEeeeEEEEEEEcCCCceeeeccccccccccCcceEEEeCc-EEEEEEe
Q 023518 174 YRHEFYQKPEEVVVTVFAK-G--IPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLST-KVEIRLA 249 (281)
Q Consensus 174 ~r~~w~Qt~~~V~i~v~~k-~--~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~~~~s~~~v~~~-kiei~L~ 249 (281)
.+|.|+||.+.|+|+|.++ | ++++++.|+|++++|+|.+. |..+.++++||++|+|++|+|++.++ .|+|+|+
T Consensus 8 ~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~~~L~~~I~~e~s~w~i~~~k~v~i~L~ 84 (131)
T 1wfi_A 8 PNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK---GQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLE 84 (131)
T ss_dssp CSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET---TSCCSBCSCBSSCBCSTTCEEEEETTTEEEEEEE
T ss_pred CcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC---CceEEEecccccccccccCEEEEcCCCEEEEEEE
Confidence 3899999999999999876 6 88999999999999999985 55677999999999999999999998 5999999
Q ss_pred ecCC-CCCCccccCcCcCCCCcC
Q 023518 250 KAEP-IQWSSLEFSKGAVVPQRV 271 (281)
Q Consensus 250 K~~~-~~W~~l~~~~~~~~~~~~ 271 (281)
|++. ..|++|.+...+...+..
T Consensus 85 K~~~~~~W~~L~~~~~~id~~ki 107 (131)
T 1wfi_A 85 KINKMEWWNRLVTSDPEINTKKI 107 (131)
T ss_dssp BSSSCCCCSCSBSSCCSCCCSSS
T ss_pred ECCCCCCChhhhcCCCCCCccEe
Confidence 9987 699999876554544443
No 16
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.76 E-value=1.4e-17 Score=132.24 Aligned_cols=103 Identities=13% Similarity=0.037 Sum_probs=99.7
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
++.++..|..++..|+|++|+..|++++..+|+++.+|.++|.+|..+|+|++|+.+|++++.++|+++.+|+++|.+|.
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~ 115 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQL 115 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCCh
Q 023518 82 KLEEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~ 104 (281)
.+|++++|+.+|++++++.|+.+
T Consensus 116 ~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 116 RLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999765
No 17
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.76 E-value=1e-17 Score=128.75 Aligned_cols=111 Identities=23% Similarity=0.288 Sum_probs=99.9
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc-------HHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM-------SKAYW 74 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~-------~~a~~ 74 (281)
|..+.+.|+.+++.|+|++|+..|+++++++|+++.+|.++|.+|..+|+|++|+.+++++++++|.+ +.+++
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~ 87 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMS 87 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999998764 56899
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023518 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 113 (281)
++|.++..+|+|++|+.+|++++..+|+ +.....+..+
T Consensus 88 ~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l 125 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL 125 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence 9999999999999999999999999885 4444444443
No 18
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.75 E-value=3.4e-17 Score=129.22 Aligned_cols=118 Identities=11% Similarity=0.135 Sum_probs=112.8
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|+++.+++.+|.++..+|+|++|+.+|++++.++|+++.+++.+|.+|..
T Consensus 22 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~ 101 (148)
T 2vgx_A 22 EQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ 101 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|++++|+.+|+++++++|+++....+..++...+...
T Consensus 102 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l 139 (148)
T 2vgx_A 102 XGELAEAESGLFLAQELIANXPEFXELSTRVSSMLEAI 139 (148)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHHHH
Confidence 99999999999999999999999888888888877765
No 19
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.75 E-value=3.6e-17 Score=127.51 Aligned_cols=118 Identities=10% Similarity=0.134 Sum_probs=112.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|+++.+|+.+|.+|..+|+|++|+.+|++++.++|+++.+++.+|.+|..
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 98 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ 98 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|++++|+.+|+++++++|+++....+..++...++..
T Consensus 99 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l 136 (142)
T 2xcb_A 99 LGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAV 136 (142)
T ss_dssp TTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 99999999999999999999999888888888777665
No 20
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.75 E-value=6.9e-18 Score=128.84 Aligned_cols=88 Identities=18% Similarity=0.230 Sum_probs=78.6
Q ss_pred CCcccccCCCeEEEEEEec-C--CCCcceEEEEeeeEEEEEEEcCCCceeeeccccccccccCcceEEEeCc-EEEEEEe
Q 023518 174 YRHEFYQKPEEVVVTVFAK-G--IPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLST-KVEIRLA 249 (281)
Q Consensus 174 ~r~~w~Qt~~~V~i~v~~k-~--~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~~~~s~~~v~~~-kiei~L~ 249 (281)
.+|.|+||.+.|+|+|.++ | ++++++.|+|++++|+|.++ |..+.++++||++|+|++|+|++.++ +|+|+|+
T Consensus 17 ~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~g~L~~~I~~deS~w~i~~~~~i~i~L~ 93 (121)
T 3qor_A 17 PNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK---GQPAIIDGELYNEVKVEESSWLIADGAVVTVHLE 93 (121)
T ss_dssp SSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET---TSCCSEEEEBSSCBCGGGCEEEEETTTEEEEEEE
T ss_pred CCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc---CcceEEeccccccccccccEEEEcCCCEEEEEEE
Confidence 4799999999999999765 5 78899999999999999885 55688999999999999999999986 8999999
Q ss_pred ecCC-CCCCccccCcC
Q 023518 250 KAEP-IQWSSLEFSKG 264 (281)
Q Consensus 250 K~~~-~~W~~l~~~~~ 264 (281)
|++. ..|++|.....
T Consensus 94 K~~~~~~W~~L~~~~~ 109 (121)
T 3qor_A 94 KINKMEWWSRLVSSDP 109 (121)
T ss_dssp BSSSSCCCSCSBTTSC
T ss_pred ECCCCCCChhhhcCCC
Confidence 9987 79999976543
No 21
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.73 E-value=2.9e-17 Score=129.76 Aligned_cols=112 Identities=18% Similarity=0.120 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.++..|..++..|+|++|++.|.++++.+|+++.+|..+|.+|..+|++++|+..|+++++++|++..+++.+|.+|..+
T Consensus 33 ~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 112 (150)
T 4ga2_A 33 KGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKN 112 (150)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHH-HHHhhhcCCCChhHHHHHHHHHH
Q 023518 84 EEYETAKVA-LEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 84 g~~~~A~~~-~~~a~~~~p~~~~~~~~l~~~~~ 115 (281)
|++++|... ++++++++|+++.+...+.++..
T Consensus 113 ~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~ 145 (150)
T 4ga2_A 113 DVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLD 145 (150)
T ss_dssp CSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 999877665 59999999999998877776644
No 22
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.71 E-value=3.2e-16 Score=120.08 Aligned_cols=119 Identities=24% Similarity=0.367 Sum_probs=112.3
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|.+++..+|+++.++.++|.++..+|++++|+..+++++.++|++..+++.+|.+++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 88 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 88 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCC-----ChhHHHHHHHHHHHHHhh
Q 023518 82 KLEEYETAKVALEKGASLAPG-----DSRFTNLIKECEERIAEE 120 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~-----~~~~~~~l~~~~~~l~~~ 120 (281)
.+|++++|+.+|+++++++|+ +..+...+..+..+....
T Consensus 89 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~ 132 (137)
T 3q49_B 89 EMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNS 132 (137)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 777888888887766554
No 23
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.71 E-value=1.9e-17 Score=131.90 Aligned_cols=87 Identities=23% Similarity=0.367 Sum_probs=78.0
Q ss_pred CCCcccccCCCeEEEEEEe-cCCCCcceEEEEeeeEEEEEEEcCCCceeeeccccccccccCcceEEEeCcE-EEEEEee
Q 023518 173 KYRHEFYQKPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTK-VEIRLAK 250 (281)
Q Consensus 173 k~r~~w~Qt~~~V~i~v~~-k~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~~~~s~~~v~~~k-iei~L~K 250 (281)
..+|.|+||.+.|+|+|.+ +|++++++.|+|++++|+|.+. |.. .++++||++|+|++|+|+|.+++ |+|+|+|
T Consensus 13 ~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k---g~~-~l~g~L~~~I~~eeS~w~i~~~k~v~I~L~K 88 (157)
T 2rh0_A 13 TPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG---GRE-ILKGKLFDSTIADEGTWTLEDRKMVRIVLTK 88 (157)
T ss_dssp CSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET---TEE-EEEEEBSSCBCGGGCEEEEECCCEEEEEEEB
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC---CEE-EEeeccccccCccccEEEEcCCcEEEEEEEE
Confidence 3589999999999999997 5888999999999999999985 554 48999999999999999999988 9999999
Q ss_pred cCC---CCCCccccCc
Q 023518 251 AEP---IQWSSLEFSK 263 (281)
Q Consensus 251 ~~~---~~W~~l~~~~ 263 (281)
++. ..|++|.+..
T Consensus 89 ~~~~~~~~W~~L~k~~ 104 (157)
T 2rh0_A 89 TKRDAANCWTSLLESE 104 (157)
T ss_dssp SSCSTTCCCSEEETTE
T ss_pred cCCCcCCcChhhhcCC
Confidence 985 7999998654
No 24
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.69 E-value=7.9e-16 Score=126.24 Aligned_cols=120 Identities=23% Similarity=0.306 Sum_probs=114.6
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH----------------HHHHHHHHHHHHccCHHHHHHHHHHHHHc
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----------------ELFADRAQASIKLQNFTEAVADANRAIEL 65 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~----------------~~~~~~a~~~~~l~~~~~A~~~~~~al~l 65 (281)
+..++..|..++..|+|++|+..|.+++...|+++ .++.++|.+|..+|+|++|+.++++++.+
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999887 89999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhhh
Q 023518 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEET 121 (281)
Q Consensus 66 ~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~~ 121 (281)
+|.+..+++++|.+|+.+|+|++|+.+|+++++++|++..+...+..+...+++..
T Consensus 118 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~ 173 (198)
T 2fbn_A 118 DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEAR 173 (198)
T ss_dssp STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888774
No 25
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.69 E-value=4.5e-16 Score=118.49 Aligned_cols=102 Identities=12% Similarity=0.008 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.++..|..++..|+|++|+..|.+++..+|+++.+++.+|.++..+|++++|+..++++++++|++..+++.+|.+|..+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHhhhcCCCChh
Q 023518 84 EEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 84 g~~~~A~~~~~~a~~~~p~~~~ 105 (281)
|++++|+.+|+++++++|++..
T Consensus 99 g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 99 HNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHC-------
T ss_pred CCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999997653
No 26
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.69 E-value=5.6e-16 Score=128.67 Aligned_cols=117 Identities=15% Similarity=0.053 Sum_probs=111.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH----------------HHHHHHHccCHHHHHHHHHHHHHc
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFAD----------------RAQASIKLQNFTEAVADANRAIEL 65 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~----------------~a~~~~~l~~~~~A~~~~~~al~l 65 (281)
++.++.+|..++..|+|++|+..|.+++..+|+++.+++. +|.+|..+|++++|+..|++++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023518 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 66 ~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~ 118 (281)
+|++..+++.+|.+++.+|++++|+.+|+++++++|++..++..++.+....+
T Consensus 84 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 84 APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTA 136 (208)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999988888765443
No 27
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.68 E-value=1.8e-15 Score=111.66 Aligned_cols=114 Identities=26% Similarity=0.440 Sum_probs=108.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHH
Q 023518 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 115 (281)
.+|++++|..+|+++++.+|++..+...+..+..
T Consensus 84 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 84 FLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 9999999999999999999999988888777653
No 28
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.68 E-value=8.9e-16 Score=116.18 Aligned_cols=116 Identities=28% Similarity=0.409 Sum_probs=110.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 96 (133)
T 2lni_A 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEA 96 (133)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~ 118 (281)
+|++++|+.+|+++++++|.+..+...+..+...++
T Consensus 97 ~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 97 MKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQY 132 (133)
T ss_dssp TTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhc
Confidence 999999999999999999999988888888876543
No 29
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.67 E-value=1.5e-15 Score=135.57 Aligned_cols=119 Identities=21% Similarity=0.360 Sum_probs=113.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------------AELFADRAQASIKLQNFTEAVADANRAIELE 66 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---------------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~ 66 (281)
+..+..+|+.++..|+|++|+..|.+++..+|++ ..++.++|.||.++|+|++|+.+|++++.++
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 226 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD 226 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3567889999999999999999999999999999 6999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 67 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
|++..+++++|.+|+.+|+|++|+.+|+++++++|++..+...++.+...+++.
T Consensus 227 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 280 (336)
T 1p5q_A 227 SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQ 280 (336)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988888888877665
No 30
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.67 E-value=1.1e-15 Score=142.08 Aligned_cols=119 Identities=23% Similarity=0.331 Sum_probs=109.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------------AELFADRAQASIKLQNFTEAVADANRAIELE 66 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---------------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~ 66 (281)
+..++.+|+.++..|+|++|+..|++++.++|++ ..+|+++|.||+++++|++|+.+|++++.++
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 347 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLD 347 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 4568899999999999999999999999999998 7899999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 67 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
|++..+++++|.+|+.+|+|++|+.+|+++++++|++..++..+..+...+++.
T Consensus 348 p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 401 (457)
T 1kt0_A 348 SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEH 401 (457)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988877765
No 31
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.67 E-value=1.7e-15 Score=114.84 Aligned_cols=115 Identities=17% Similarity=0.150 Sum_probs=105.6
Q ss_pred ChhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc---HHHHH
Q 023518 1 MATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA---ELFADRAQASIKLQNFTEAVADANRAIELEPSM---SKAYW 74 (281)
Q Consensus 1 ma~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~---~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~---~~a~~ 74 (281)
|++.++..|..++..|+|++|+..|.+++..+|++. .+++.+|.++..+|+|++|+..+++++..+|++ ..+++
T Consensus 1 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (129)
T 2xev_A 1 MARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLL 80 (129)
T ss_dssp --CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred CcHHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHH
Confidence 456789999999999999999999999999999988 899999999999999999999999999999999 89999
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHH
Q 023518 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 115 (281)
.+|.+++.+|++++|+..|++++..+|++.........+..
T Consensus 81 ~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~ 121 (129)
T 2xev_A 81 KLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQS 121 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHH
Confidence 99999999999999999999999999999877666555543
No 32
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.67 E-value=4.6e-15 Score=111.39 Aligned_cols=117 Identities=33% Similarity=0.473 Sum_probs=111.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+.+++.++|.+..+++.+|.++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (131)
T 2vyi_A 13 ERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSS 92 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
+|++++|..+|+++++++|++..+...++.+...+++
T Consensus 93 ~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 93 LNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred hCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999888877654
No 33
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=3.8e-15 Score=114.94 Aligned_cols=113 Identities=27% Similarity=0.424 Sum_probs=107.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 78 (281)
+..++..|..++..|+|++|+..|.++++.+|++ ..++.++|.+|..+|+|++|+..+++++.++|.+..+++.+|.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 107 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQ 107 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHH
Confidence 4578899999999999999999999999999998 8999999999999999999999999999999999999999999
Q ss_pred HHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023518 79 ACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 79 ~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 114 (281)
+++.+|++++|..+|+++++++|++..++..+..+.
T Consensus 108 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 108 ALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 999999999999999999999999998888877764
No 34
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.65 E-value=3.4e-15 Score=124.71 Aligned_cols=119 Identities=15% Similarity=0.174 Sum_probs=98.8
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|++++..+|+++.+++.+|.++..+|++++|+..++++++++|++..+++.+|.++.
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~ 84 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYV 84 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 34677888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred Hh-----------hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 82 KL-----------EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 82 ~~-----------g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.+ |++++|+..|+++++++|++..++..++.+...+++.
T Consensus 85 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~ 134 (217)
T 2pl2_A 85 ALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGER 134 (217)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCh
Confidence 88 8888888888888888888888777777776655443
No 35
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.64 E-value=1.2e-14 Score=114.33 Aligned_cols=114 Identities=32% Similarity=0.510 Sum_probs=107.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|.+++..+|.+..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++.
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHH
Q 023518 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 115 (281)
.+|++++|..+|+++++++|.+......+..+..
T Consensus 93 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~ 126 (166)
T 1a17_A 93 ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 126 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999988766666633
No 36
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.63 E-value=3.2e-15 Score=146.35 Aligned_cols=116 Identities=18% Similarity=0.202 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.+.+.|..+...|+|++|+..|+++++++|+++.+|+++|.+|..+|++++|+..|++|++++|++..+++++|.+|..+
T Consensus 45 a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~ 124 (723)
T 4gyw_A 45 AHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDS 124 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 34445555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 84 g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
|++++|+.+|+++++++|++..+...++.+...+++
T Consensus 125 g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~ 160 (723)
T 4gyw_A 125 GNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCD 160 (723)
T ss_dssp TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhccc
Confidence 555555555555555555555555555555444444
No 37
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.63 E-value=2.9e-15 Score=135.75 Aligned_cols=119 Identities=24% Similarity=0.442 Sum_probs=113.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHh----------------cCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE----------------ISPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~----------------~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l 65 (281)
+..+...|+.++..|+|++|+..|+++++ .+|.+..+|.++|.||+++++|++|+.++++++++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999999 77888899999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 66 ~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|++..+++++|.+|+.+|+|++|+.+|+++++++|++..+...+..+...+++.
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~ 357 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQ 357 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888775
No 38
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.63 E-value=9.1e-15 Score=109.91 Aligned_cols=118 Identities=19% Similarity=0.281 Sum_probs=110.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc-------HHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM-------SKAYW 74 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~-------~~a~~ 74 (281)
+..++..|..++..|+|++|+..|.+++..+|.+..++..+|.++..+|++++|+..+++++.+.|.+ ..+++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999998876 89999
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.+|.++..+|++++|..+|+++++..| +......+..+...+++.
T Consensus 84 ~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 84 RIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999998 688888888888877654
No 39
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.62 E-value=5.9e-16 Score=122.17 Aligned_cols=113 Identities=11% Similarity=-0.094 Sum_probs=104.3
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHH
Q 023518 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYE 87 (281)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~ 87 (281)
.|..+...|++++|+..|.+++..+|+++..++.+|.+|+.+|+|++|+..|+++++++|+++.+|+.+|.+|..+|+++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~ 82 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTD 82 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchH
Confidence 57788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 88 TAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 88 ~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|+.+|+++++++|++..+...++.+...+++.
T Consensus 83 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~ 115 (150)
T 4ga2_A 83 KAVECYRRSVELNPTQKDLVLKIAELLCKNDVT 115 (150)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCh
Confidence 999999999999999999999999887766654
No 40
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.61 E-value=2.4e-14 Score=119.46 Aligned_cols=105 Identities=16% Similarity=0.318 Sum_probs=101.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISP-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p-~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
++.++..|..++..|+|++|+..|.++++.+| .+..+++++|.++..+|++++|+..+++++.++|.+..+++.+|.+|
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 86 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAY 86 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 45789999999999999999999999999998 89999999999999999999999999999999999999999999999
Q ss_pred HHhhcHHHHHHHHHHhhhcCCCChhH
Q 023518 81 MKLEEYETAKVALEKGASLAPGDSRF 106 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~~~~p~~~~~ 106 (281)
..+|++++|+.+|+++++++|++..+
T Consensus 87 ~~~~~~~~A~~~~~~al~~~p~~~~~ 112 (228)
T 4i17_A 87 RDMKNNQEYIATLTEGIKAVPGNATI 112 (228)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHcccHHHHHHHHHHHHHHCCCcHHH
Confidence 99999999999999999999999955
No 41
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.61 E-value=4.3e-14 Score=105.09 Aligned_cols=115 Identities=21% Similarity=0.375 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.+++..+|++..++..+|.++...|++++|+..+++++.++|.+..+++.+|.+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 89 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK 89 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l 117 (281)
+|++++|..+|+++++.+|.+..+...++.+....
T Consensus 90 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 90 QGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 124 (125)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhc
Confidence 99999999999999999999998888888776543
No 42
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.60 E-value=2.1e-14 Score=119.91 Aligned_cols=118 Identities=13% Similarity=0.107 Sum_probs=98.9
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHcCCCcH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-----------QNFTEAVADANRAIELEPSMS 70 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l-----------~~~~~A~~~~~~al~l~p~~~ 70 (281)
+..++..|..++..|++++|+..|++++..+|++..++.++|.++..+ |++++|+..++++++++|++.
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 346777888888888888888888888888888888888888888888 888888888888888888888
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.+++.+|.++..+|++++|+.+|+++++++ ++..++..++.+...+++.
T Consensus 119 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~ 167 (217)
T 2pl2_A 119 PLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRL 167 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCH
Confidence 888888888888888888888888888888 7777777777777666654
No 43
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.60 E-value=1.1e-14 Score=142.51 Aligned_cols=119 Identities=18% Similarity=0.221 Sum_probs=114.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
++.+.+.|..+...|+|++|+..|+++++++|+++.++.++|.+|..+|++++|+..|++|++++|++..+|+++|.+|.
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~ 88 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLK 88 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.+|++++|+.+|+++++++|++..++..++.+...+++.
T Consensus 89 ~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~ 127 (723)
T 4gyw_A 89 EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNI 127 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 999999999999999999999999999999888777665
No 44
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.60 E-value=8.5e-15 Score=133.27 Aligned_cols=116 Identities=13% Similarity=0.032 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~-~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
.+...|..+...|+|++|+..|++++.++|++..+|.+||.++..+|+ +++|+.+|++++.++|++..+|+.+|.++..
T Consensus 99 a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~ 178 (382)
T 2h6f_A 99 VYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEW 178 (382)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 455566666666666666666666666666666666666666666665 6666666666666666666666666666666
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
+|++++|+.+|+++++++|++..++..++.+...+++
T Consensus 179 ~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~ 215 (382)
T 2h6f_A 179 LRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKL 215 (382)
T ss_dssp HTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCC
Confidence 6666666666666666666666666666666555544
No 45
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.60 E-value=3.7e-14 Score=114.23 Aligned_cols=118 Identities=19% Similarity=0.207 Sum_probs=87.3
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHH----------
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSK---------- 71 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~---------- 71 (281)
+..++..|..++..|+|++|+..|+++++.+|+++.++..+|.+|..+|++++|+..+.+++...|.+..
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999999999999999998888888777777776665544
Q ss_pred ------------------------HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 72 ------------------------AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 72 ------------------------a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
+++.+|.+|..+|+|++|+.+|+++++++|.+..++..++.+...+++
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~ 156 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGL 156 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCC
Confidence 455555555555555555555555555555555555555555544444
No 46
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.59 E-value=1.2e-14 Score=115.39 Aligned_cols=106 Identities=14% Similarity=0.224 Sum_probs=96.7
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 12 AFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNF----------TEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 12 ~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~----------~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
.-+.+.|++|+..|.+++.++|+++++|+++|.++..++++ ++|+..|++|++++|++..+|+++|.+|.
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 34667899999999999999999999999999999999875 59999999999999999999999999999
Q ss_pred Hhh-----------cHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023518 82 KLE-----------EYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 82 ~~g-----------~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l 117 (281)
.+| +|++|+.+|++|++++|++..++..+..+....
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~ 138 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAP 138 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCH
Confidence 885 899999999999999999998887777665443
No 47
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.58 E-value=7.9e-15 Score=133.48 Aligned_cols=115 Identities=7% Similarity=-0.031 Sum_probs=110.3
Q ss_pred hhHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDY-FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~-y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
+..+..+|..+...|+ |++|+..|++++.++|++..+|.++|.++..+|++++|+.+|++++.++|++..+|+.+|.++
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~ 210 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVI 210 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHH
Confidence 4578899999999996 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023518 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 116 (281)
..+|++++|+.+|+++++++|++..++..++.+...
T Consensus 211 ~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 211 QEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp HHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999998888766
No 48
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.58 E-value=2.8e-15 Score=134.01 Aligned_cols=118 Identities=22% Similarity=0.296 Sum_probs=93.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH-----------------HHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA-----------------ELFADRAQASIKLQNFTEAVADANRAIE 64 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~-----------------~~~~~~a~~~~~l~~~~~A~~~~~~al~ 64 (281)
+..++.+|+.++..|+|++|+..|.+++...|++. .+|+++|.||+++|+|++|+.+|++++.
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999877 4899999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 65 LEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 65 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
++|++..+++++|.+|+.+|+|++|+.+|+++++++|++..++..+..+......
T Consensus 259 ~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~ 313 (338)
T 2if4_A 259 EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKA 313 (338)
T ss_dssp HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------------
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998888888554444
No 49
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.57 E-value=3.3e-14 Score=123.69 Aligned_cols=102 Identities=28% Similarity=0.416 Sum_probs=99.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++.+|..++..|+|++|+..|++++..+|+++.+++++|.+|..+|++++|+.++++++.++|++..+++.+|.+|+
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 83 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCC
Q 023518 82 KLEEYETAKVALEKGASLAPGD 103 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~ 103 (281)
.+|+|++|+.+|+++++++|++
T Consensus 84 ~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 84 EMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999876
No 50
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.56 E-value=6.5e-14 Score=116.80 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=110.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcH-------HHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS-------KAYWR 75 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~-------~a~~~ 75 (281)
..++..|..++..|+|++|+..|.+++..+|++..++..+|.+|..+|++++|+..+++++.++|++. .+++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 122 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLK 122 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 35677999999999999999999999999999999999999999999999999999999999999988 67999
Q ss_pred HHHHHHHhhcHHHHHHHHHHhhhcCCC--ChhHHHHHHHHHHHHHhh
Q 023518 76 KATACMKLEEYETAKVALEKGASLAPG--DSRFTNLIKECEERIAEE 120 (281)
Q Consensus 76 ~g~~~~~~g~~~~A~~~~~~a~~~~p~--~~~~~~~l~~~~~~l~~~ 120 (281)
+|.++..+|++++|+.+|+++++++|+ +...+..++.+...++..
T Consensus 123 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 123 EGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 888888888887766654
No 51
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.56 E-value=2.8e-14 Score=104.31 Aligned_cols=102 Identities=17% Similarity=0.201 Sum_probs=97.8
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC--cHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS--MSKAYWRKATAC 80 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~--~~~a~~~~g~~~ 80 (281)
..+...|..++..|+|++|+..|.+++..+|.+..++..+|.++..+|++++|+..+++++.++|. +..+++.+|.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~ 86 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADAL 86 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHh-hcHHHHHHHHHHhhhcCCCCh
Q 023518 81 MKL-EEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 81 ~~~-g~~~~A~~~~~~a~~~~p~~~ 104 (281)
..+ |++++|+.++++++...|.+.
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 87 RYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp TTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999 999999999999999998764
No 52
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.55 E-value=2.1e-13 Score=112.98 Aligned_cols=106 Identities=16% Similarity=0.154 Sum_probs=93.6
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh----
Q 023518 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL---- 83 (281)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~---- 83 (281)
.|..++..|+|++|+..|.++++.+|+++.+++.+|.+|..+|++++|+.+|++++.++|++..+++.+|.+|+..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999988888887776543
Q ss_pred -------------------------------hcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023518 84 -------------------------------EEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 84 -------------------------------g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 114 (281)
|+|++|+.+|+++++++|+.. ....+.++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~-~~~~l~~i~ 200 (208)
T 3urz_A 140 KKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE-AQKTLDKIL 200 (208)
T ss_dssp HHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH-HHHHHHHHH
Confidence 468899999999999999744 444455543
No 53
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.55 E-value=1.6e-13 Score=109.92 Aligned_cols=114 Identities=17% Similarity=0.165 Sum_probs=105.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH-HHHccCH--HHHHHHHHHHHHcCCCcHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQA-SIKLQNF--TEAVADANRAIELEPSMSKAYWRKAT 78 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~-~~~l~~~--~~A~~~~~~al~l~p~~~~a~~~~g~ 78 (281)
+..++..|..++..|+|++|+..|.+++..+|++..++..+|.+ +...|++ ++|+..+++++.++|.+..+++.+|.
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 123 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLAS 123 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999 8899999 99999999999999999999999999
Q ss_pred HHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHH
Q 023518 79 ACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 79 ~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 115 (281)
+|+.+|++++|..+|+++++++|.+......+..+..
T Consensus 124 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~~ 160 (177)
T 2e2e_A 124 DAFMQANYAQAIELWQKVMDLNSPRINRTQLVESINM 160 (177)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHHH
Confidence 9999999999999999999999999876666555544
No 54
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.54 E-value=9.3e-15 Score=109.89 Aligned_cols=101 Identities=17% Similarity=0.092 Sum_probs=90.4
Q ss_pred HhcCHHHHHHHHHHHHhc---CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHH
Q 023518 14 IDDYFELAYDLYSQAIEI---SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAK 90 (281)
Q Consensus 14 ~~~~y~~Al~~y~~al~~---~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~ 90 (281)
..|+|++|+..|.++++. +|++..+++++|.+|..+|+|++|+..++++++++|++..+++.+|.+++.+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 368999999999999999 58889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCChhHHHHHHHHH
Q 023518 91 VALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 91 ~~~~~a~~~~p~~~~~~~~l~~~~ 114 (281)
.+|++++...|+++.+......+.
T Consensus 82 ~~~~~al~~~p~~~~~~~~~~ai~ 105 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQSYKQAIL 105 (117)
T ss_dssp HHHHHHHHHHCCCHHHHHTHHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHH
Confidence 999999999999988766655544
No 55
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.52 E-value=4e-13 Score=108.07 Aligned_cols=103 Identities=15% Similarity=0.134 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..+...++++.|+..+.+++..+|++..++..+|.+|..+|++++|+..|+++++++|.+..+++.+|.+|..
T Consensus 74 ~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~ 153 (184)
T 3vtx_A 74 EAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG 153 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChh
Q 023518 83 LEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~ 105 (281)
+|++++|+.+|+++++++|++..
T Consensus 154 ~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 154 KGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp TTCHHHHHHHHHHHHHTTHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCccCHH
Confidence 99999999999999999987643
No 56
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.51 E-value=3.5e-13 Score=114.85 Aligned_cols=106 Identities=14% Similarity=0.144 Sum_probs=100.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC---cHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPS---MSKAYWR 75 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~---~~~a~~~ 75 (281)
++.++..|..++..|+|++|+..|.+++..+|++ ..+++.+|.+|+.+|+|++|+..|++++.+.|+ ...+++.
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~ 94 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYE 94 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHH
Confidence 4678999999999999999999999999999999 899999999999999999999999999999874 4789999
Q ss_pred HHHHHHH--------hhcHHHHHHHHHHhhhcCCCChhHH
Q 023518 76 KATACMK--------LEEYETAKVALEKGASLAPGDSRFT 107 (281)
Q Consensus 76 ~g~~~~~--------~g~~~~A~~~~~~a~~~~p~~~~~~ 107 (281)
+|.+++. +|++++|+..|+++++.+|++....
T Consensus 95 lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 95 RAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 9999999 9999999999999999999987765
No 57
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.51 E-value=4.5e-14 Score=132.02 Aligned_cols=115 Identities=30% Similarity=0.501 Sum_probs=107.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|+++++.+|++..++.++|.+|..+|+|++|+.+++++++++|++..+++++|.+|..
T Consensus 7 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~ 86 (477)
T 1wao_1 7 EELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMA 86 (477)
T ss_dssp TTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 34566788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l 117 (281)
+|+|++|+.+|+++++++|++..++..+..+...+
T Consensus 87 ~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~ 121 (477)
T 1wao_1 87 LGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV 121 (477)
T ss_dssp HTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888884433
No 58
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.50 E-value=1.9e-14 Score=114.08 Aligned_cols=106 Identities=10% Similarity=-0.100 Sum_probs=98.2
Q ss_pred hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHH
Q 023518 15 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALE 94 (281)
Q Consensus 15 ~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~ 94 (281)
.+++-.+-..|.+++..+|++..+++.+|.+++.+|+|++|+..|++++.++|.++.+|+.+|.+|..+|+|++|+.+|+
T Consensus 15 l~~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 15 VIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYA 94 (151)
T ss_dssp HHHHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 34444555668889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 95 KGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 95 ~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
++++++|+++.++..++.|...+++.
T Consensus 95 ~al~l~P~~~~~~~~lg~~~~~lg~~ 120 (151)
T 3gyz_A 95 VAFALGKNDYTPVFHTGQCQLRLKAP 120 (151)
T ss_dssp HHHHHSSSCCHHHHHHHHHHHHTTCH
T ss_pred HHHhhCCCCcHHHHHHHHHHHHcCCH
Confidence 99999999999999999999888776
No 59
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.50 E-value=1.2e-12 Score=107.53 Aligned_cols=103 Identities=15% Similarity=0.086 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcH------------
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS------------ 70 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~------------ 70 (281)
..++..|..++..|+|++|+..|.+++..+|++..+++++|.+|..+|++++|+..+++++.+.|.+.
T Consensus 38 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 117 (213)
T 1hh8_A 38 RICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFK 117 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCE
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccC
Confidence 35666777777777777777777777777777777777777777777777777777777777666554
Q ss_pred ----HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChh
Q 023518 71 ----KAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 71 ----~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~ 105 (281)
.+++.+|.+|+.+|++++|..+|+++++++|++..
T Consensus 118 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 118 LFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp EEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred ccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 77777777777777777777777777777776543
No 60
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.50 E-value=7.6e-13 Score=99.20 Aligned_cols=117 Identities=21% Similarity=0.321 Sum_probs=108.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
++.+...|..++..|++++|+..|.+++..+|++...+..+|.++...|++++|+..+++++..+|.+..+++.+|.++.
T Consensus 1 a~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 1 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023518 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~ 118 (281)
..|++++|...+++++...|.+......+..+....+
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 117 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG 117 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHc
Confidence 9999999999999999999998877777776665443
No 61
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.48 E-value=3.9e-14 Score=104.12 Aligned_cols=95 Identities=19% Similarity=0.273 Sum_probs=86.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------HHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM------SKAYWR 75 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~~a~~~ 75 (281)
++.++..|..++..|+|++|+..|.+++..+|+++.++.++|.++..+|++++|+.++++++.++|++ ..++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYR 83 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 45788899999999999999999999999999999999999999999999999999999999999998 889999
Q ss_pred HHHHHHHhhcHHHHHHHHHHh
Q 023518 76 KATACMKLEEYETAKVALEKG 96 (281)
Q Consensus 76 ~g~~~~~~g~~~~A~~~~~~a 96 (281)
+|.++..+|+++.|+..+++.
T Consensus 84 ~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 84 LELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHhHhhhHhHHHHh
Confidence 999999999888777665443
No 62
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.48 E-value=5.2e-13 Score=111.92 Aligned_cols=111 Identities=32% Similarity=0.470 Sum_probs=102.2
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|++..+++.+|.++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 219 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA 219 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcC------CCChhHHHHHHHH
Q 023518 83 LEEYETAKVALEKGASLA------PGDSRFTNLIKEC 113 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~------p~~~~~~~~l~~~ 113 (281)
+|++++|..+|+++++++ |.+..+...+.+|
T Consensus 220 ~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 220 VKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 999999999999999999 8888777776654
No 63
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.48 E-value=1.1e-12 Score=111.21 Aligned_cols=111 Identities=20% Similarity=0.095 Sum_probs=104.3
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.+|+.
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~ 123 (275)
T 1xnf_A 44 QLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY 123 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 113 (281)
+|++++|+.+|+++++++|++.....++..+
T Consensus 124 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 124 GGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 9999999999999999999998665555444
No 64
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.48 E-value=6.8e-13 Score=108.99 Aligned_cols=115 Identities=19% Similarity=0.180 Sum_probs=104.4
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++ ++ ++.+++++|.+|..+|++++|+..+++++.++|.+..+++.+|.+|+.
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~ 83 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ 83 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 457889999999999999999999996 33 788999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCCh----------------hHHHHHHHHHHHHHhh
Q 023518 83 LEEYETAKVALEKGASLAPGDS----------------RFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~----------------~~~~~l~~~~~~l~~~ 120 (281)
+|+|++|+.+|++++++.|.+. .+...++.+...+++.
T Consensus 84 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 137 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEW 137 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCH
T ss_pred cccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCH
Confidence 9999999999999999998877 6777777776665554
No 65
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.47 E-value=2.1e-12 Score=102.44 Aligned_cols=116 Identities=13% Similarity=0.147 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.+...|..++..|++++|+..|.+++...|++..++..+|.++...|++++|+..+++++..+|.+..+++.+|.++..+
T Consensus 44 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 123 (186)
T 3as5_A 44 VALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNL 123 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHc
Confidence 45667777777788888888888887777777777777888887788888888888888877777777777788888888
Q ss_pred hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 84 g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
|++++|..+|+++++.+|.+......++.+...+++
T Consensus 124 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 159 (186)
T 3as5_A 124 GRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGR 159 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCC
Confidence 888888888888887777777766666666655444
No 66
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.45 E-value=7.3e-13 Score=123.57 Aligned_cols=118 Identities=14% Similarity=0.021 Sum_probs=111.9
Q ss_pred hHHHHHHHHHHHh---------cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc--------cCHHHHHHHHHHHHHc
Q 023518 3 TDLEKKAKEAFID---------DYFELAYDLYSQAIEISPNSAELFADRAQASIKL--------QNFTEAVADANRAIEL 65 (281)
Q Consensus 3 ~~l~~~g~~~~~~---------~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l--------~~~~~A~~~~~~al~l 65 (281)
..+...|..++.. |+|++|+..|.++++.+|++..+|+++|.+|..+ |++++|+..|++++.+
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV 250 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 4567889999999 9999999999999999999999999999999999 9999999999999999
Q ss_pred CC---CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 66 EP---SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 66 ~p---~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+| .++.+++.+|.+|..+|+|++|+.+|+++++++|++..++..+..+...+++.
T Consensus 251 ~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~ 308 (474)
T 4abn_A 251 DRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRL 308 (474)
T ss_dssp CGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 99 99999999999999999999999999999999999999888888888877765
No 67
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.44 E-value=3.9e-12 Score=111.41 Aligned_cols=116 Identities=19% Similarity=0.217 Sum_probs=109.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH----HHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE----LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~----~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
.+..|..++..|+|++|+..|.+++...|++.. ++..+|.++..+|++++|+..+++++.++|++..+++.+|.++
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAY 316 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 456699999999999999999999999999874 4667999999999999999999999999999999999999999
Q ss_pred HHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
..+|++++|..+|+++++++|++..++..+.+++..+++.
T Consensus 317 ~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 317 LIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQS 356 (359)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999888765
No 68
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.44 E-value=1.7e-12 Score=102.89 Aligned_cols=118 Identities=13% Similarity=0.050 Sum_probs=110.2
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.+++..+|.+..++..+|.++...|++++|+..+++++.++|.+..+++.+|.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 88 (186)
T 3as5_A 9 VYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQ 88 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.|++++|..+|++++..+|.+..+...++.+...+++.
T Consensus 89 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 126 (186)
T 3as5_A 89 VQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRF 126 (186)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcH
Confidence 99999999999999999999998888887777655543
No 69
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.44 E-value=1.7e-12 Score=123.29 Aligned_cols=116 Identities=15% Similarity=0.082 Sum_probs=110.8
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..+...|..++..|+|++|+..|+++++.+|++..++.++|.+|..+|++++|+..++++++++|++..+++.+|.+|.
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 102 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALE 102 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023518 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l 117 (281)
.+|++++|+.+|+++++++|++..+...+..+...+
T Consensus 103 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 103 DAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999998888888887776
No 70
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.44 E-value=2.9e-12 Score=107.20 Aligned_cols=107 Identities=17% Similarity=0.143 Sum_probs=97.9
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHH---HHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMSK---AYWR 75 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~---a~~~ 75 (281)
++.++.+|..++..|+|++|+..|.+++...|++ ..+++.+|.+|+.+|+|++|+..|+++++++|++.. +++.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 4678999999999999999999999999998887 478999999999999999999999999999998754 8999
Q ss_pred HHHHHHH------------------hhcHHHHHHHHHHhhhcCCCChhHHH
Q 023518 76 KATACMK------------------LEEYETAKVALEKGASLAPGDSRFTN 108 (281)
Q Consensus 76 ~g~~~~~------------------~g~~~~A~~~~~~a~~~~p~~~~~~~ 108 (281)
+|.+++. .|++++|+..|+++++.+|++..+..
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~ 134 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTD 134 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHH
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHH
Confidence 9999987 57999999999999999999986543
No 71
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.44 E-value=1.8e-12 Score=114.70 Aligned_cols=118 Identities=15% Similarity=0.195 Sum_probs=108.5
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.+++..+|+++.++..+|.++..+|++++|+..+++++.++|.+..+++.+|.+|..
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 297 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN 297 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCC-----------hhHHHHHHHHHHHHHhh
Q 023518 83 LEEYETAKVALEKGASLAPGD-----------SRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~-----------~~~~~~l~~~~~~l~~~ 120 (281)
+|++++|..+|++++.++|++ ..++..++.+...+++.
T Consensus 298 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 346 (368)
T 1fch_A 298 LGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQS 346 (368)
T ss_dssp HTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCG
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCCh
Confidence 999999999999999998887 67788888888877765
No 72
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.43 E-value=2.1e-12 Score=96.24 Aligned_cols=102 Identities=15% Similarity=0.174 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023518 19 ELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 19 ~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
+.|+..|.+++..+|+++.+++.+|.+|..+|++++|+..|++++.++|.+..+++.+|.+|..+|++++|+.+|+++++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC--hhHHHHHHHHHHHHHhh
Q 023518 99 LAPGD--SRFTNLIKECEERIAEE 120 (281)
Q Consensus 99 ~~p~~--~~~~~~l~~~~~~l~~~ 120 (281)
++|.+ ......+......++..
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~l~~~ 105 (115)
T 2kat_A 82 AAQSRGDQQVVKELQVFLRRLARE 105 (115)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hccccccHHHHHHHHHHHHHhccc
Confidence 98743 34445555555555554
No 73
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.43 E-value=3.5e-13 Score=131.21 Aligned_cols=117 Identities=9% Similarity=-0.083 Sum_probs=104.5
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
+.++.+|..++..|+|++|+..|+++++.+|++..+++++|.+|..+|+|++|+.+|+++++++|++..+++.+|.+|..
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~ 513 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL 513 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|+|++ +.+|+++++++|++..++..++.+...+++.
T Consensus 514 ~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~ 550 (681)
T 2pzi_A 514 AGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDR 550 (681)
T ss_dssp HTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred cCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCH
Confidence 999999 9999999999999988888888887776665
No 74
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.8e-12 Score=108.50 Aligned_cols=119 Identities=15% Similarity=0.172 Sum_probs=110.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHh--------------------------cCCCCHHHHHHHHHHHHHccCHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE--------------------------ISPNSAELFADRAQASIKLQNFTEA 55 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~--------------------------~~p~~~~~~~~~a~~~~~l~~~~~A 55 (281)
+..+...|..++..|+|++|+..|.+++. .+|.+..++..+|.++...|++++|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 35677889999999999999999999999 6677788999999999999999999
Q ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 56 VADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 56 ~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+..+++++.++|.+..+++.+|.++..+|++++|+.+|+++++.+|++...+..++.+...+++.
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~ 223 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEY 223 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999988888888776654
No 75
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.43 E-value=1.2e-12 Score=122.08 Aligned_cols=115 Identities=15% Similarity=0.071 Sum_probs=109.9
Q ss_pred hhHHHHHHHHHHHhcCH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYF-ELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y-~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
+..++.+|..++..|+| ++|+..|.++++.+|+++.+++.+|.+|..+|++++|+..|+++++++|+ ..+++.+|.+|
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~ 180 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVL 180 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHH
Confidence 45688899999999999 99999999999999999999999999999999999999999999999999 69999999999
Q ss_pred HHh---------hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023518 81 MKL---------EEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 81 ~~~---------g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l 117 (281)
..+ |++++|+.+|+++++++|++..++..++.+...+
T Consensus 181 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 226 (474)
T 4abn_A 181 RQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSL 226 (474)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999998888888766
No 76
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.43 E-value=1.7e-12 Score=115.41 Aligned_cols=118 Identities=16% Similarity=0.229 Sum_probs=87.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.+++..+|+++.++..+|.+|..+|++++|+..|++++.++|++..+++.+|.+|..
T Consensus 214 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 293 (365)
T 4eqf_A 214 DLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCIN 293 (365)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 34566777777777888888888888777777777777788888777888888888888887777777777778888888
Q ss_pred hhcHHHHHHHHHHhhhcCCCC------------hhHHHHHHHHHHHHHhh
Q 023518 83 LEEYETAKVALEKGASLAPGD------------SRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~------------~~~~~~l~~~~~~l~~~ 120 (281)
+|++++|..+|+++++++|++ ..++..++.+...+++.
T Consensus 294 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 343 (365)
T 4eqf_A 294 LGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQP 343 (365)
T ss_dssp HTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCH
T ss_pred CCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcH
Confidence 888888888888777777652 44566666666555544
No 77
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.43 E-value=3.5e-12 Score=106.15 Aligned_cols=110 Identities=17% Similarity=0.180 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhh
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE 84 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g 84 (281)
+...|..++..|++++|+..|.+++..+|.+..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++..+|
T Consensus 60 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 139 (243)
T 2q7f_A 60 YINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLE 139 (243)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Confidence 34444444444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred cHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023518 85 EYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 85 ~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 114 (281)
++++|+..|+++++.+|.+..+...++.+.
T Consensus 140 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (243)
T 2q7f_A 140 QPKLALPYLQRAVELNENDTEARFQFGMCL 169 (243)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 444444444444444444444444443333
No 78
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.43 E-value=5.4e-12 Score=104.96 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=95.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|++++|+..|.++++.+|.+..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.+++.
T Consensus 92 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 171 (243)
T 2q7f_A 92 TAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLAN 171 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 34566788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.|++++|+..|++++..+|.+......++.+...+++.
T Consensus 172 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 209 (243)
T 2q7f_A 172 EGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENR 209 (243)
T ss_dssp HTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCH
Confidence 88888888888888888888877777777777655554
No 79
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.42 E-value=3.9e-12 Score=111.44 Aligned_cols=110 Identities=14% Similarity=0.179 Sum_probs=104.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
++.++..|..++..|+|++|+..|.+++..+|+++.+++.+|.++..+|++++|+..+++++.++|++..+++.+|.++.
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 82 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLL 82 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCC---CChhHHHHHH
Q 023518 82 KLEEYETAKVALEKGASLAP---GDSRFTNLIK 111 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p---~~~~~~~~l~ 111 (281)
.+|++++|...|+++++.+| .+......+.
T Consensus 83 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~ 115 (359)
T 3ieg_A 83 KQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLV 115 (359)
T ss_dssp HHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcCCcccChHHHHHHHH
Confidence 99999999999999999999 7777766653
No 80
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.42 E-value=2.4e-12 Score=112.05 Aligned_cols=118 Identities=14% Similarity=0.050 Sum_probs=104.3
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHH------------------------
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVAD------------------------ 58 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~------------------------ 58 (281)
+.++..|..++..|++++|+..|++++..+|+++.+++.+|.++..+|++++|+..
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~ 197 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLX 197 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHh
Confidence 46788999999999999999999999999999999999999999999999887654
Q ss_pred ----------HHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC--hhHHHHHHHHHHHHHhh
Q 023518 59 ----------ANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD--SRFTNLIKECEERIAEE 120 (281)
Q Consensus 59 ----------~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~--~~~~~~l~~~~~~l~~~ 120 (281)
+++++.++|++..+++.+|.+|...|++++|+..|+++++.+|++ ..++..+..+...+++.
T Consensus 198 ~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~ 271 (287)
T 3qou_A 198 QAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTG 271 (287)
T ss_dssp HHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTT
T ss_pred hcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCC
Confidence 445567788999999999999999999999999999999999988 66778888877766653
No 81
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.42 E-value=6.4e-13 Score=101.60 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=87.1
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhH
Q 023518 27 QAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 106 (281)
Q Consensus 27 ~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~ 106 (281)
++..++|+.+..+.++|.+|++.|+|++|+..|+++++++|.+..+|+.+|.+|+.+|++++|+.+|+++++++|++..+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 34557899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 023518 107 TNLIKECEERIAEE 120 (281)
Q Consensus 107 ~~~l~~~~~~l~~~ 120 (281)
+..++.+...+++.
T Consensus 84 ~~~lg~~~~~~~~~ 97 (126)
T 4gco_A 84 YIRKAACLVAMREW 97 (126)
T ss_dssp HHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHCCCH
Confidence 99999998877765
No 82
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.41 E-value=2.8e-12 Score=108.90 Aligned_cols=117 Identities=16% Similarity=0.129 Sum_probs=87.3
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.++++.+|++..++..+|.+|..+|++++|+..+++++.++|.+..+++.+|..++.
T Consensus 75 ~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 154 (272)
T 3u4t_A 75 ADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY 154 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 34667777777777777777777777777777777777777777777777777777777777777777777777744445
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
.+++++|+.+|+++++++|.+.....+++.+...++.
T Consensus 155 ~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 155 NKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDP 191 (272)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCc
Confidence 5577777777777777777777777777776665544
No 83
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.40 E-value=1.3e-12 Score=110.90 Aligned_cols=118 Identities=13% Similarity=0.026 Sum_probs=94.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC--C-cHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP--S-MSKAYWRKATA 79 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p--~-~~~a~~~~g~~ 79 (281)
+.++..|..++..|+|++|+..|.++++.+|++..++..+|.+|..+|++++|+..+++++...+ . ...+++.+|.+
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~ 83 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKI 83 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHH
Confidence 45677888888888888888888888888888888888888888888888888888888888321 1 14558888888
Q ss_pred HHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 80 CMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 80 ~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+..+|++++|+.+|+++++++|.+..++..++.+...+++.
T Consensus 84 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 124 (272)
T 3u4t_A 84 LMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNF 124 (272)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCH
T ss_pred HHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCH
Confidence 88888888888888888888888888877777777666554
No 84
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.40 E-value=6.6e-12 Score=102.89 Aligned_cols=113 Identities=12% Similarity=0.039 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.+...|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++...
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 89 (225)
T 2vq2_A 10 IKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGR 89 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Confidence 44556666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred -hcHHHHHHHHHHhhh--cCCCChhHHHHHHHHHHH
Q 023518 84 -EEYETAKVALEKGAS--LAPGDSRFTNLIKECEER 116 (281)
Q Consensus 84 -g~~~~A~~~~~~a~~--~~p~~~~~~~~l~~~~~~ 116 (281)
|++++|..+|+++++ ..|.+..+...++.+...
T Consensus 90 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 125 (225)
T 2vq2_A 90 LNRPAESMAYFDKALADPTYPTPYIANLNKGICSAK 125 (225)
T ss_dssp TCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHH
Confidence 666666666666666 333334444444444433
No 85
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.40 E-value=4.7e-13 Score=105.22 Aligned_cols=100 Identities=17% Similarity=0.131 Sum_probs=94.0
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcC
Q 023518 21 AYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLA 100 (281)
Q Consensus 21 Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~ 100 (281)
+-..|.+++..+|++...++.+|.+++..|+|++|+..|++++.++|.+..+|+.+|.+|..+|+|++|+.+|++++.++
T Consensus 6 ~~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 85 (148)
T 2vgx_A 6 GGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD 85 (148)
T ss_dssp CCCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hhhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 34568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHhh
Q 023518 101 PGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 101 p~~~~~~~~l~~~~~~l~~~ 120 (281)
|++..+...++.+...+++.
T Consensus 86 p~~~~~~~~lg~~~~~~g~~ 105 (148)
T 2vgx_A 86 IXEPRFPFHAAECLLQXGEL 105 (148)
T ss_dssp TTCTHHHHHHHHHHHHTTCH
T ss_pred CCCchHHHHHHHHHHHcCCH
Confidence 99999999999888777665
No 86
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.39 E-value=2.8e-12 Score=114.00 Aligned_cols=115 Identities=16% Similarity=0.122 Sum_probs=103.1
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023518 6 EKKAKEAFIDDYFELAYDLYSQAIEISPN--SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~p~--~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
...|..+...|++++|+..|.+++..+|+ ++.++..+|.+|..+|++++|+..+++++.++|.+..+++.+|.+|..+
T Consensus 181 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 260 (365)
T 4eqf_A 181 RRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANG 260 (365)
T ss_dssp --------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 34588999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 84 g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
|++++|+.+|+++++++|++..++..++.+...+++.
T Consensus 261 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 297 (365)
T 4eqf_A 261 DRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAY 297 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCH
Confidence 9999999999999999999999999999888877664
No 87
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.39 E-value=1.1e-11 Score=101.65 Aligned_cols=118 Identities=16% Similarity=0.087 Sum_probs=95.4
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc-cCHHHHHHHHHHHHH--cCCCcHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-QNFTEAVADANRAIE--LEPSMSKAYWRKATA 79 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l-~~~~~A~~~~~~al~--l~p~~~~a~~~~g~~ 79 (281)
..+...|..++..|++++|+..|.+++..+|++..++..+|.++..+ |++++|+..+++++. ..|.+..+++.+|.+
T Consensus 43 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~ 122 (225)
T 2vq2_A 43 LAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGIC 122 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHH
Confidence 34566788888888888888888888888888888888888888888 888888888888888 566677888888888
Q ss_pred HHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 80 CMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 80 ~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+...|++++|+.+|+++++.+|.+..+...++.+...+++.
T Consensus 123 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 163 (225)
T 2vq2_A 123 SAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQL 163 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCH
Confidence 88888888888888888888888877777777776655544
No 88
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.39 E-value=7.3e-13 Score=128.97 Aligned_cols=112 Identities=10% Similarity=-0.064 Sum_probs=106.6
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++.+|..++..|+|++|+..|+++++.+|+++.+++++|.+|..+|+|++ +.+|+++++++|++..+++++|.+|.
T Consensus 467 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~ 545 (681)
T 2pzi_A 467 WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARS 545 (681)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023518 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 114 (281)
.+|++++|+.+|+++++++|++..++..++.+.
T Consensus 546 ~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 546 AEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 999999999999999999999988877777765
No 89
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.39 E-value=8.2e-12 Score=104.86 Aligned_cols=116 Identities=16% Similarity=0.111 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH--cCCCcHHHHHHHHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE--LEPSMSKAYWRKATACM 81 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~--l~p~~~~a~~~~g~~~~ 81 (281)
.+...|..++..|+|++|+..|.+++..+|.+..++..+|.+|..+|++++|+..+++++. ..|.+..+++.+|.+++
T Consensus 73 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~ 152 (252)
T 2ho1_A 73 AHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSL 152 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHH
Confidence 4455666666666666666666666666666666666666666666666666666666666 55666666666666666
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
.+|++++|..+|+++++.+|.+..+...++.+...+++
T Consensus 153 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 190 (252)
T 2ho1_A 153 QMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKERE 190 (252)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCC
Confidence 66666666666666666666666665555555544443
No 90
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.39 E-value=3.7e-12 Score=102.37 Aligned_cols=117 Identities=11% Similarity=0.067 Sum_probs=90.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHH----------------------
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADAN---------------------- 60 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~---------------------- 60 (281)
+.++..|..++..|+|++|+..|++++..+|+++.+++.+|.++..+|++++|+..++
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~ 86 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQ 86 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHh
Confidence 3467788888888888888888888888888888888888888888888877765444
Q ss_pred ------------HHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC--hhHHHHHHHHHHHHHh
Q 023518 61 ------------RAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD--SRFTNLIKECEERIAE 119 (281)
Q Consensus 61 ------------~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~--~~~~~~l~~~~~~l~~ 119 (281)
+++.++|++..+++.+|.++..+|++++|+..|+++++.+|+. ..++..+..+...+++
T Consensus 87 ~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~ 159 (176)
T 2r5s_A 87 QAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQ 159 (176)
T ss_dssp HHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCS
T ss_pred hcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCC
Confidence 3445567778888888888888888888888888888888865 3466666666665544
No 91
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.38 E-value=8.2e-12 Score=106.32 Aligned_cols=119 Identities=15% Similarity=0.147 Sum_probs=105.1
Q ss_pred hHHHHHHHHHHH--------hcCHHHHHHHHHHHHhcCCCCHHHH-----------------HHHHHHHHHccCHHHHHH
Q 023518 3 TDLEKKAKEAFI--------DDYFELAYDLYSQAIEISPNSAELF-----------------ADRAQASIKLQNFTEAVA 57 (281)
Q Consensus 3 ~~l~~~g~~~~~--------~~~y~~Al~~y~~al~~~p~~~~~~-----------------~~~a~~~~~l~~~~~A~~ 57 (281)
..++..|.+++. .|+|++|+..|.+++..+|++..+. +.+|.+|..+|+|++|+.
T Consensus 90 ~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 169 (261)
T 3qky_A 90 QAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAV 169 (261)
T ss_dssp HHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 467889999999 9999999999999999999986555 889999999999999999
Q ss_pred HHHHHHHcCCC---cHHHHHHHHHHHHHh----------hcHHHHHHHHHHhhhcCCCChhH---HHHHHHHHHHHHhhh
Q 023518 58 DANRAIELEPS---MSKAYWRKATACMKL----------EEYETAKVALEKGASLAPGDSRF---TNLIKECEERIAEET 121 (281)
Q Consensus 58 ~~~~al~l~p~---~~~a~~~~g~~~~~~----------g~~~~A~~~~~~a~~~~p~~~~~---~~~l~~~~~~l~~~~ 121 (281)
.|++++...|+ ...+++.+|.+|..+ |++++|+..|+++++.+|+++.+ ...+..+...++...
T Consensus 170 ~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~~~~~~~~ 249 (261)
T 3qky_A 170 TYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTELE 249 (261)
T ss_dssp HHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHhh
Confidence 99999999998 578999999999988 99999999999999999999654 455666666666653
No 92
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.38 E-value=5.2e-12 Score=106.10 Aligned_cols=118 Identities=17% Similarity=0.082 Sum_probs=108.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|.+++..+|.+..++..+|.++...|++++|+..+++++.++|.+..+++.+|.+++
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 116 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLY 116 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhh--cCCCChhHHHHHHHHHHHHHh
Q 023518 82 KLEEYETAKVALEKGAS--LAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~--~~p~~~~~~~~l~~~~~~l~~ 119 (281)
..|++++|..+|++++. ..|.+..+...++.+...+++
T Consensus 117 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 156 (252)
T 2ho1_A 117 EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKK 156 (252)
T ss_dssp HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTC
T ss_pred HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCC
Confidence 99999999999999999 777777777777776655544
No 93
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.38 E-value=5.1e-12 Score=113.35 Aligned_cols=117 Identities=19% Similarity=0.162 Sum_probs=94.2
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|++++|+..|.+++..+|+++.++..+|.++...|++++|+..+++++.++|.+..++..+|.++..
T Consensus 238 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 317 (388)
T 1w3b_A 238 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE 317 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH
Confidence 35667788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
.|++++|...|+++++++|++......++.+...+++
T Consensus 318 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 354 (388)
T 1w3b_A 318 QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK 354 (388)
T ss_dssp TTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC
Confidence 8888888888888888888877777777666554443
No 94
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.38 E-value=1.1e-11 Score=92.66 Aligned_cols=101 Identities=24% Similarity=0.396 Sum_probs=95.7
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|++++|+..|.+++...|.+..++..+|.++...|++++|+..+++++...|.+..+++.+|.++..
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 115 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 115 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 34667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCC
Q 023518 83 LEEYETAKVALEKGASLAPGD 103 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~ 103 (281)
+|++++|..+|++++..+|.+
T Consensus 116 ~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 116 QGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TTCHHHHHHHHHHHHHHSTTC
T ss_pred HccHHHHHHHHHHHHccCCCC
Confidence 999999999999999998853
No 95
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.37 E-value=8.5e-12 Score=108.12 Aligned_cols=118 Identities=14% Similarity=0.223 Sum_probs=107.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|++++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++..
T Consensus 173 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 252 (327)
T 3cv0_A 173 QLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSN 252 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCC------------ChhHHHHHHHHHHHHHhh
Q 023518 83 LEEYETAKVALEKGASLAPG------------DSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~------------~~~~~~~l~~~~~~l~~~ 120 (281)
+|++++|..+|++++.++|. +...+..++.+...+++.
T Consensus 253 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 302 (327)
T 3cv0_A 253 MSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRP 302 (327)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCH
T ss_pred hccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCH
Confidence 99999999999999999998 667777788877766654
No 96
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.36 E-value=1.6e-11 Score=113.28 Aligned_cols=104 Identities=20% Similarity=0.301 Sum_probs=99.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
++.++.+|+.++..|+|++|+..|++++..+| ++.++..+|.++..+|++++|+.+++++++++|++..+++.+|.+|.
T Consensus 6 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 84 (514)
T 2gw1_A 6 ALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANE 84 (514)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 56889999999999999999999999999999 68999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhH
Q 023518 82 KLEEYETAKVALEKGASLAPGDSRF 106 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~~ 106 (281)
.+|++++|+..|++++..+|.+...
T Consensus 85 ~~g~~~~A~~~~~~~~~~~~~~~~~ 109 (514)
T 2gw1_A 85 GLGKFADAMFDLSVLSLNGDFNDAS 109 (514)
T ss_dssp HTTCHHHHHHHHHHHHHSSSCCGGG
T ss_pred HHhhHHHHHHHHHHHHhcCCCccch
Confidence 9999999999999999999866543
No 97
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.36 E-value=1.7e-11 Score=111.51 Aligned_cols=109 Identities=14% Similarity=0.197 Sum_probs=103.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|++++..+|++..++..+|.++..+|++++|+..+++++.++|++..+++.+|.+|.
T Consensus 26 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 105 (450)
T 2y4t_A 26 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLL 105 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCCh---hHHHHH
Q 023518 82 KLEEYETAKVALEKGASLAPGDS---RFTNLI 110 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~---~~~~~l 110 (281)
.+|++++|..+|+++++++|.+. ..+..+
T Consensus 106 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l 137 (450)
T 2y4t_A 106 KQGKLDEAEDDFKKVLKSNPSENEEKEAQSQL 137 (450)
T ss_dssp HTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCCChhhHHHHHHH
Confidence 99999999999999999999887 655544
No 98
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.36 E-value=1.2e-11 Score=110.97 Aligned_cols=119 Identities=20% Similarity=0.191 Sum_probs=105.3
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
...+...|..+...|+|++|+..|.+++..+|++..++..+|.+|..+|++++|+..+++++.++|++..+++.+|.++.
T Consensus 203 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 282 (388)
T 1w3b_A 203 LDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALK 282 (388)
T ss_dssp HHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Confidence 34677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
..|++++|..+|+++++++|.+......+..+....++.
T Consensus 283 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 321 (388)
T 1w3b_A 283 EKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNI 321 (388)
T ss_dssp HHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCH
T ss_pred HcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCH
Confidence 999999999999999999999888888777776655443
No 99
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.36 E-value=2.2e-11 Score=110.83 Aligned_cols=116 Identities=18% Similarity=0.209 Sum_probs=109.1
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~----~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
+...|..++..|+|++|+..|.+++...|+++ .++..+|.++.++|++++|+..+++++.++|++..+++.+|.+|
T Consensus 260 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 339 (450)
T 2y4t_A 260 LIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAY 339 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 34569999999999999999999999999985 47899999999999999999999999999999999999999999
Q ss_pred HHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
..+|++++|..+|+++++++|++..+...+..+...++..
T Consensus 340 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 379 (450)
T 2y4t_A 340 LIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQS 379 (450)
T ss_dssp HHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999988887765
No 100
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.36 E-value=1.4e-11 Score=106.83 Aligned_cols=118 Identities=12% Similarity=-0.028 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDD-YFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 3 ~~l~~~g~~~~~~~-~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
..+...|..++..| ++++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.+.|.+..+++.+|.++.
T Consensus 91 ~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 170 (330)
T 3hym_B 91 VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYG 170 (330)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 45677788888888 88888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
..|++++|..+|+++++.+|.+..+...++.+...+++.
T Consensus 171 ~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~ 209 (330)
T 3hym_B 171 LTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEW 209 (330)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccH
Confidence 888888888888888888888887777777766655443
No 101
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.36 E-value=8.2e-12 Score=104.41 Aligned_cols=118 Identities=11% Similarity=0.064 Sum_probs=103.5
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHH------------------ccCHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA---ELFADRAQASIK------------------LQNFTEAVADANR 61 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~---~~~~~~a~~~~~------------------l~~~~~A~~~~~~ 61 (281)
..++..|.+++..|+|++|+..|+++++.+|++. .+++.+|.++.. +|++++|+..|++
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 121 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSK 121 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHH
Confidence 4678899999999999999999999999999986 478999999987 5789999999999
Q ss_pred HHHcCCCcHHHH-----------------HHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh---hHHHHHHHHHHHHHhh
Q 023518 62 AIELEPSMSKAY-----------------WRKATACMKLEEYETAKVALEKGASLAPGDS---RFTNLIKECEERIAEE 120 (281)
Q Consensus 62 al~l~p~~~~a~-----------------~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~---~~~~~l~~~~~~l~~~ 120 (281)
++...|++..++ +.+|.+|+..|+|.+|+..|+++++..|+++ .+...++.+...+++.
T Consensus 122 ~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~ 200 (225)
T 2yhc_A 122 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMN 200 (225)
T ss_dssp HHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCc
Confidence 999999876443 6789999999999999999999999999987 4567777777766665
No 102
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.35 E-value=1.4e-12 Score=104.37 Aligned_cols=113 Identities=12% Similarity=0.118 Sum_probs=100.1
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHH-HHHhhcH
Q 023518 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-CMKLEEY 86 (281)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~~~~g~~ 86 (281)
.+..++..|+|++|+..|.+++..+|+++.++..+|.+|...|++++|+..|++++.++|.+..+++.+|.+ ++..|++
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~ 95 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQH 95 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTC
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCc
Confidence 344567789999999999999999999999999999999999999999999999999999999999999999 8899999
Q ss_pred --HHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 87 --ETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 87 --~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
++|+.+|+++++.+|++..++..++.+...+++.
T Consensus 96 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 131 (177)
T 2e2e_A 96 MTAQTRAMIDKALALDSNEITALMLLASDAFMQANY 131 (177)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred chHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccH
Confidence 9999999999999999999888888887766554
No 103
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.34 E-value=1.8e-11 Score=106.13 Aligned_cols=117 Identities=16% Similarity=0.119 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC---------CCcHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELE---------PSMSKAYW 74 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~---------p~~~~a~~ 74 (281)
.+...|..++..|++++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.+. +....+++
T Consensus 161 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 240 (330)
T 3hym_B 161 PMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLN 240 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHH
Confidence 345566667777777777777777777777777777777777777777777777777777664 45556777
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.+|.++..+|++++|..+|+++++++|++..++..++.+...+++.
T Consensus 241 ~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~ 286 (330)
T 3hym_B 241 NLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNF 286 (330)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccH
Confidence 7777777777777777777777777777776666666666665554
No 104
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.34 E-value=2.4e-12 Score=99.84 Aligned_cols=98 Identities=14% Similarity=0.137 Sum_probs=90.0
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCC
Q 023518 23 DLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (281)
Q Consensus 23 ~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~ 102 (281)
..|.+++..+|++...++.+|.+++..|+|++|+..|++++.++|.+..+|+.+|.+|..+|+|++|+.+|++++.++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 56788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHhh
Q 023518 103 DSRFTNLIKECEERIAEE 120 (281)
Q Consensus 103 ~~~~~~~l~~~~~~l~~~ 120 (281)
+..+...++.+...+++.
T Consensus 85 ~~~~~~~lg~~~~~~g~~ 102 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDL 102 (142)
T ss_dssp CTHHHHHHHHHHHHTTCH
T ss_pred CcHHHHHHHHHHHHcCCH
Confidence 999999999888777665
No 105
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.33 E-value=1.6e-11 Score=108.61 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=100.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.++++.+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.+|..
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 144 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTN 144 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHH
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFT 107 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~ 107 (281)
+|++++|+..|++++.++|.+....
T Consensus 145 ~g~~~~A~~~~~~~~~~~~~~~~~~ 169 (368)
T 1fch_A 145 ESLQRQACEILRDWLRYTPAYAHLV 169 (368)
T ss_dssp TTCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred cCCHHHHHHHHHHHHHhCcCcHHHH
Confidence 9999999999999999999887654
No 106
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.33 E-value=4.9e-12 Score=91.38 Aligned_cols=92 Identities=18% Similarity=0.120 Sum_probs=80.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE-LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~-~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.+.+|..++..|+|++|+..|.+++..+|++.. +++.+|.+|..+|++++|+..|++++.++|++..+++.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR-------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------
Confidence 467899999999999999999999999999998 99999999999999999999999999999998887754
Q ss_pred hcHHHHHHHHHHhhhcCCCCh
Q 023518 84 EEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 84 g~~~~A~~~~~~a~~~~p~~~ 104 (281)
+.+.+|..+|+++...+|++.
T Consensus 75 ~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 75 KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHHHHCCTTHHHHCCS
T ss_pred HHHHHHHHHHHHHhccCcccc
Confidence 777888888888888777654
No 107
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.31 E-value=3.5e-11 Score=84.86 Aligned_cols=79 Identities=24% Similarity=0.350 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
++..|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++..+
T Consensus 12 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 12 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 90 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 3444555555555555555555555555555555555555555555555555555555555555555555555554443
No 108
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.31 E-value=3.5e-11 Score=105.05 Aligned_cols=114 Identities=10% Similarity=-0.002 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHH--HHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQ--ASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~--~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
.+...|..+...|++++|+..|.++++.+|++....+..+. .+...|++++|+..|++++..+|+++.+++.+|.++.
T Consensus 132 ~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~ 211 (291)
T 3mkr_A 132 CMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHM 211 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 44556666666677777777777766666665533333232 2222356666666666666666666666666777777
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023518 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l 117 (281)
.+|++++|..+|++++.++|+++.+...+..+...+
T Consensus 212 ~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~ 247 (291)
T 3mkr_A 212 AQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHL 247 (291)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 777777777777777777776666665555554433
No 109
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.29 E-value=1.2e-11 Score=114.88 Aligned_cols=103 Identities=25% Similarity=0.378 Sum_probs=92.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
++.++.+|..++..|+|++|+..|++++..+|+++.++..+|.||..+|++++|+..+++++.++|++..+++.+|.++.
T Consensus 25 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 104 (537)
T 3fp2_A 25 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANE 104 (537)
T ss_dssp HHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChh
Q 023518 82 KLEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~ 105 (281)
.+|++++|+..|+ ++.++|+...
T Consensus 105 ~~g~~~~A~~~~~-~~~~~~~~~~ 127 (537)
T 3fp2_A 105 SLGNFTDAMFDLS-VLSLNGDFDG 127 (537)
T ss_dssp HHTCHHHHHHHHH-HHC-------
T ss_pred HcCCHHHHHHHHH-HHhcCCCCCh
Confidence 9999999999996 8888887654
No 110
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.29 E-value=3.5e-11 Score=104.24 Aligned_cols=108 Identities=11% Similarity=0.017 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++.+|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++..
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 101 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 101 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHH
Q 023518 83 LEEYETAKVALEKGASLAPGDSRFTNLI 110 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~~~~~l 110 (281)
+|++++|...|++++..+|.+......+
T Consensus 102 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 129 (327)
T 3cv0_A 102 EHNANAALASLRAWLLSQPQYEQLGSVN 129 (327)
T ss_dssp TTCHHHHHHHHHHHHHTSTTTTTC----
T ss_pred cCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 9999999999999999999887665443
No 111
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.29 E-value=6e-11 Score=103.57 Aligned_cols=99 Identities=8% Similarity=0.059 Sum_probs=91.8
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHH-HHH
Q 023518 13 FIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYET-AKV 91 (281)
Q Consensus 13 ~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~-A~~ 91 (281)
...|+|++|+..|+++++.+|+++.++.++|.++.++|++++|+..+++++.++|+++.+++++|.++..+|++.+ +..
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~ 256 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNR 256 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHH
Confidence 3458999999999999999999999999999999999999999999999999999999999999999999999976 578
Q ss_pred HHHHhhhcCCCChhHHHHHH
Q 023518 92 ALEKGASLAPGDSRFTNLIK 111 (281)
Q Consensus 92 ~~~~a~~~~p~~~~~~~~l~ 111 (281)
+++++++++|+++.+.....
T Consensus 257 ~~~~~~~~~P~~~~~~d~~~ 276 (291)
T 3mkr_A 257 YLSQLKDAHRSHPFIKEYRA 276 (291)
T ss_dssp HHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHhCCCChHHHHHHH
Confidence 99999999999997765433
No 112
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.28 E-value=4.8e-11 Score=106.31 Aligned_cols=96 Identities=17% Similarity=0.156 Sum_probs=89.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..+...|.+++..|+|++|+..|++++.++|++..+++++|.+|..+|++++|+.+|+++++++|++..+++.+|.++.
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~ 275 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQ 275 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHH-HHHHHhh
Q 023518 82 KLEEYETAK-VALEKGA 97 (281)
Q Consensus 82 ~~g~~~~A~-~~~~~a~ 97 (281)
.+|++++|. ..|++.+
T Consensus 276 ~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 276 RIRRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 999999994 4554443
No 113
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.27 E-value=1e-10 Score=91.49 Aligned_cols=97 Identities=18% Similarity=0.247 Sum_probs=87.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHH--HHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWR--KATAC 80 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~--~g~~~ 80 (281)
..+...|..++..|+|++|+..|.+++..+|.+..+++.+|.++..+|++++|+..+++++.++|.+..++.. ++..+
T Consensus 48 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~ 127 (166)
T 1a17_A 48 IYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKI 127 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4577889999999999999999999999999999999999999999999999999999999999999888854 45558
Q ss_pred HHhhcHHHHHHHHHHhhhc
Q 023518 81 MKLEEYETAKVALEKGASL 99 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~~~ 99 (281)
...|++++|+..+.++..+
T Consensus 128 ~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 128 VKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccchHHH
Confidence 8999999999999876543
No 114
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.26 E-value=3.7e-11 Score=111.69 Aligned_cols=117 Identities=15% Similarity=0.173 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.+...|..++..|+|++|+..|.+++..+|+++.++..+|.++..+|++++|+..+++++.++|.+..+++.+|.+++.+
T Consensus 278 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 357 (537)
T 3fp2_A 278 SYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQ 357 (537)
T ss_dssp HHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 45667777888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 84 g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
|++++|..+|+++++.+|.+..+...++.+...+++.
T Consensus 358 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 394 (537)
T 3fp2_A 358 GKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDF 394 (537)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCH
Confidence 8888888888888888888888777777776655544
No 115
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.25 E-value=2.8e-11 Score=102.50 Aligned_cols=109 Identities=14% Similarity=0.024 Sum_probs=99.9
Q ss_pred HHHhcCHHHHHHHHHHHHhcC----CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHH
Q 023518 12 AFIDDYFELAYDLYSQAIEIS----PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYE 87 (281)
Q Consensus 12 ~~~~~~y~~Al~~y~~al~~~----p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~ 87 (281)
+...++|++|+..|.++++.. |.++.++..+|.++..+|++++|+..|++++.++|.+..+++.+|.++..+|+++
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~ 94 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFD 94 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHH
T ss_pred cCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHH
Confidence 345689999999999999974 4567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 88 TAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 88 ~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|+.+|+++++++|.+..+...++.+...+++.
T Consensus 95 ~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~ 127 (275)
T 1xnf_A 95 AAYEAFDSVLELDPTYNYAHLNRGIALYYGGRD 127 (275)
T ss_dssp HHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhcCccccHHHHHHHHHHHHhccH
Confidence 999999999999999999888888887766654
No 116
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.24 E-value=9.4e-11 Score=111.19 Aligned_cols=104 Identities=13% Similarity=0.070 Sum_probs=99.3
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..+...|..++..|+|++|+..|.++++.+|++..++.++|.+|..+|++++|+..++++++++|++..+++.+|.++.
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 136 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRR 136 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hh---hcHHHHHHHHHHhhhcCCCChh
Q 023518 82 KL---EEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 82 ~~---g~~~~A~~~~~~a~~~~p~~~~ 105 (281)
.+ |++++|...|+++++.+|.+..
T Consensus 137 ~~~~~g~~~~A~~~~~~al~~~p~~~~ 163 (568)
T 2vsy_A 137 RLCDWRALDVLSAQVRAAVAQGVGAVE 163 (568)
T ss_dssp HTTCCTTHHHHHHHHHHHHHHTCCCSC
T ss_pred HhhccccHHHHHHHHHHHHhcCCcccC
Confidence 99 9999999999999999998643
No 117
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.24 E-value=5.2e-11 Score=103.60 Aligned_cols=118 Identities=14% Similarity=0.015 Sum_probs=99.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHc-cCHHHHHHHHHHHHHcCCCc-----
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKL-QNFTEAVADANRAIELEPSM----- 69 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l-~~~~~A~~~~~~al~l~p~~----- 69 (281)
+..+.+.|..+...|+|++|+.+|.+++.+.+.. ..++.++|.+|... |++++|+..|++|+.+.|..
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~ 156 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVAL 156 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHH
Confidence 3567788999999999999999999999987654 56889999999995 99999999999999998754
Q ss_pred -HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChh-------HHHHHHHHHHHHHh
Q 023518 70 -SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR-------FTNLIKECEERIAE 119 (281)
Q Consensus 70 -~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~-------~~~~l~~~~~~l~~ 119 (281)
..++..+|.++..+|+|++|+.+|++++++.|.+.. +...++.|...+++
T Consensus 157 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~ 214 (292)
T 1qqe_A 157 SNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATD 214 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCC
Confidence 567899999999999999999999999999988754 23445555554444
No 118
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.22 E-value=5.7e-11 Score=89.61 Aligned_cols=87 Identities=18% Similarity=0.135 Sum_probs=81.5
Q ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023518 34 NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 34 ~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 113 (281)
.++..+..+|.+++..|+|++|+..|++++.++|.+..+++.+|.+++.+|+|++|+.+|+++++++|++...+..++.+
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHhh
Q 023518 114 EERIAEE 120 (281)
Q Consensus 114 ~~~l~~~ 120 (281)
...+++.
T Consensus 82 ~~~~~~~ 88 (126)
T 3upv_A 82 QIAVKEY 88 (126)
T ss_dssp HHHTTCH
T ss_pred HHHHhCH
Confidence 8776664
No 119
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.22 E-value=8.5e-11 Score=85.72 Aligned_cols=75 Identities=19% Similarity=0.228 Sum_probs=68.1
Q ss_pred cCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChh
Q 023518 31 ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 31 ~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~ 105 (281)
.+|+++.+++.+|.+|..+|+|++|+..|+++++++|++..+|+.+|.+|..+|++++|+.+|++++++.|.+..
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~ 76 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGT 76 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999775443
No 120
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.6e-10 Score=84.50 Aligned_cols=86 Identities=21% Similarity=0.242 Sum_probs=78.7
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC------hhHHH
Q 023518 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTN 108 (281)
Q Consensus 35 ~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~------~~~~~ 108 (281)
++..+..+|.++...|+|++|+..|++++.++|.+..+++.+|.+++.+|+|++|+.+|+++++++|++ .....
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999999998 66677
Q ss_pred HHHHHHHHHHhh
Q 023518 109 LIKECEERIAEE 120 (281)
Q Consensus 109 ~l~~~~~~l~~~ 120 (281)
.++.+...++..
T Consensus 83 ~~~~~~~~~~~~ 94 (111)
T 2l6j_A 83 RLELAQGAVGSV 94 (111)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhH
Confidence 777777777654
No 121
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.21 E-value=6.5e-11 Score=102.98 Aligned_cols=103 Identities=17% Similarity=0.068 Sum_probs=88.2
Q ss_pred hHHHHHHHHHHHh-cCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHH----
Q 023518 3 TDLEKKAKEAFID-DYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSMSK---- 71 (281)
Q Consensus 3 ~~l~~~g~~~~~~-~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~---- 71 (281)
..+...|..+... |+|++|+.+|+++++..|.+ ..++.++|.+|..+|+|++|+..|++++.+.|.+..
T Consensus 118 ~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 197 (292)
T 1qqe_A 118 NFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWS 197 (292)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGG
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHH
Confidence 4677889999996 99999999999999997754 567899999999999999999999999999987543
Q ss_pred ---HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChh
Q 023518 72 ---AYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 72 ---a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~ 105 (281)
+++++|.++..+|++++|+.+|+++++++|....
T Consensus 198 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 234 (292)
T 1qqe_A 198 LKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFAD 234 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCC
Confidence 6889999999999999999999999999998664
No 122
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.21 E-value=5.1e-11 Score=100.68 Aligned_cols=118 Identities=20% Similarity=0.213 Sum_probs=102.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------C
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL--------E 66 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~--------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l--------~ 66 (281)
..+...|..++..|+|++|+..|.+++.. .|....++..+|.+|..+|++++|+..+.+++.+ +
T Consensus 44 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 123 (283)
T 3edt_B 44 TMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFH 123 (283)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCC
Confidence 46788999999999999999999999987 3555788999999999999999999999999998 4
Q ss_pred CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc--------CCCChhHHHHHHHHHHHHHhh
Q 023518 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL--------APGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 67 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~--------~p~~~~~~~~l~~~~~~l~~~ 120 (281)
|....+++.+|.+|+.+|++++|..+|++++.+ .|....+...++.+...+++.
T Consensus 124 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 185 (283)
T 3edt_B 124 PDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKY 185 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 677899999999999999999999999999998 555555666777776666554
No 123
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.21 E-value=6.3e-11 Score=90.38 Aligned_cols=84 Identities=24% Similarity=0.256 Sum_probs=72.7
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023518 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 35 ~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 114 (281)
.+.++.++|.++++.|+|++|+..|++|++++|++..+|+++|.+|+.+|+|++|+.+|+++++++|.+......+..+.
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~ 86 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAM 86 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999987765444444444
Q ss_pred HHHH
Q 023518 115 ERIA 118 (281)
Q Consensus 115 ~~l~ 118 (281)
..++
T Consensus 87 ~~lg 90 (127)
T 4gcn_A 87 SRAG 90 (127)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3333
No 124
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.21 E-value=1.3e-10 Score=81.82 Aligned_cols=84 Identities=24% Similarity=0.384 Sum_probs=78.3
Q ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023518 34 NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 34 ~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 113 (281)
.+..+++.+|.++...|++++|+..+++++.++|.+..+++.+|.+++.+|++++|+.+|+++++++|++......++.+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999988888887
Q ss_pred HHHH
Q 023518 114 EERI 117 (281)
Q Consensus 114 ~~~l 117 (281)
...+
T Consensus 87 ~~~~ 90 (91)
T 1na3_A 87 KQKQ 90 (91)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6543
No 125
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.20 E-value=4.3e-10 Score=103.11 Aligned_cols=118 Identities=16% Similarity=0.111 Sum_probs=102.0
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc---------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC-------
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI---------SPNSAELFADRAQASIKLQNFTEAVADANRAIELE------- 66 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~---------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~------- 66 (281)
..+...|..++..|+|++|++.|.+|+++ +|.....|.++|.+|..+|++++|+.++++++.+.
T Consensus 52 ~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~ 131 (472)
T 4g1t_A 52 TMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPY 131 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccccc
Confidence 34567899999999999999999999886 67778899999999999999999999999999863
Q ss_pred -CCcHHHHHHHHHHHHHh--hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 67 -PSMSKAYWRKATACMKL--EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 67 -p~~~~a~~~~g~~~~~~--g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+..+.++..+|.++... ++|++|+.+|+++++++|+++.+...+..+...++..
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~ 188 (472)
T 4g1t_A 132 RIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNW 188 (472)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHS
T ss_pred chhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc
Confidence 34578888899888765 4799999999999999999999888888776666553
No 126
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.19 E-value=2.3e-10 Score=107.90 Aligned_cols=118 Identities=14% Similarity=0.100 Sum_probs=87.7
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc------CCCc-HHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIEL------EPSM-SKAYWR 75 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l------~p~~-~~a~~~ 75 (281)
..+...|..+...|++++|++.|.+++...|.++..|..+|.+|.+.|++++|+..|++++.+ +|++ ..++..
T Consensus 442 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~ 521 (597)
T 2xpi_A 442 LPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWAN 521 (597)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHH
Confidence 345667777777777778888777777777777777777777777777777777777777776 4553 667777
Q ss_pred HHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 76 KATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 76 ~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|.+|...|++++|...|+++++++|.+...+..+..+....++.
T Consensus 522 l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~ 566 (597)
T 2xpi_A 522 LGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIP 566 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCH
Confidence 777777777777777777777777777777777777666555443
No 127
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.18 E-value=3.6e-10 Score=106.57 Aligned_cols=117 Identities=13% Similarity=0.028 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.+...|..++..|++++|+..|.++++.+|.+...|..++.+|.+.|++++|+..|++++..+|.+..+++.+|.+|...
T Consensus 375 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 454 (597)
T 2xpi_A 375 TWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQL 454 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHc
Confidence 45667888888999999999999999888888888999999999999999999999999999988888999999999999
Q ss_pred hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 84 g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
|++++|...|+++++.+|.+...+..+..+..+.++.
T Consensus 455 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 491 (597)
T 2xpi_A 455 GNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDM 491 (597)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCH
Confidence 9999999999999998888887777777766555443
No 128
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.16 E-value=3.8e-10 Score=85.32 Aligned_cols=83 Identities=18% Similarity=0.160 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023518 38 LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 38 ~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l 117 (281)
.++.+|.+++..|++++|+..+++++.++|++..+|+.+|.++..+|++++|+.+|+++++++|++..++..++.+...+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred Hhh
Q 023518 118 AEE 120 (281)
Q Consensus 118 ~~~ 120 (281)
++.
T Consensus 99 g~~ 101 (121)
T 1hxi_A 99 HNA 101 (121)
T ss_dssp HHH
T ss_pred CCH
Confidence 775
No 129
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.15 E-value=3.6e-10 Score=98.88 Aligned_cols=113 Identities=10% Similarity=-0.010 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE-LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~-~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
.+...|..+...|++++|...|+++++..|.++. +|..+|.++.+.|++++|+..|++|++.+|....+|+..+...+.
T Consensus 101 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~ 180 (308)
T 2ond_A 101 LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYY 180 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 4566677777777777777777777777777765 777777777777777777777777777777666666655544433
Q ss_pred -hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023518 83 -LEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 83 -~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 116 (281)
.|++++|+.+|+++++.+|++..++..+..+...
T Consensus 181 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 215 (308)
T 2ond_A 181 CSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 215 (308)
T ss_dssp TSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 5777777777777777777766665555544433
No 130
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.15 E-value=2e-10 Score=90.85 Aligned_cols=89 Identities=13% Similarity=0.142 Sum_probs=83.1
Q ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHH
Q 023518 32 SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIK 111 (281)
Q Consensus 32 ~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~ 111 (281)
.+.++..++.+|.+++..|+|++|+..|++++.++|.+..+++.+|.+|+.+|+|++|+.+|+++++++|++..++..++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHhh
Q 023518 112 ECEERIAEE 120 (281)
Q Consensus 112 ~~~~~l~~~ 120 (281)
.+...+++.
T Consensus 87 ~~~~~~g~~ 95 (164)
T 3sz7_A 87 LARFDMADY 95 (164)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHccCH
Confidence 888776665
No 131
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.14 E-value=2.4e-10 Score=102.77 Aligned_cols=117 Identities=10% Similarity=0.147 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHc------CCCcHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----ELFADRAQASIKLQNFTEAVADANRAIEL------EPSMSKA 72 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~----~~~~~~a~~~~~l~~~~~A~~~~~~al~l------~p~~~~a 72 (281)
..++..|..++..|+|++|+..|.++++..|++. .++..+|.+|..+|++++|+..+++++.+ .+....+
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 128 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKS 128 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHH
Confidence 4677899999999999999999999999999986 58999999999999999999999999988 5677889
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHhhhc------CCCChhHHHHHHHHHHHHHh
Q 023518 73 YWRKATACMKLEEYETAKVALEKGASL------APGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 73 ~~~~g~~~~~~g~~~~A~~~~~~a~~~------~p~~~~~~~~l~~~~~~l~~ 119 (281)
++.+|.+|..+|++++|..+|++++.+ .+........++.+...+++
T Consensus 129 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 129 SGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 999999999999999999999999988 33344456667777766666
No 132
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.14 E-value=4.2e-10 Score=85.47 Aligned_cols=91 Identities=18% Similarity=0.245 Sum_probs=83.5
Q ss_pred hcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHH
Q 023518 30 EISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNL 109 (281)
Q Consensus 30 ~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~ 109 (281)
..++.++..++.+|.+++..|+|++|+..|.+++.++|.+..+++.+|.+++.+|+|++|+.+|+++++++|++..++..
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 82 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 82 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 023518 110 IKECEERIAEE 120 (281)
Q Consensus 110 l~~~~~~l~~~ 120 (281)
++.+...+++.
T Consensus 83 l~~~~~~~~~~ 93 (137)
T 3q49_B 83 LGQCQLEMESY 93 (137)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHHhhH
Confidence 98888776654
No 133
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.14 E-value=2.8e-10 Score=105.55 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=82.8
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..+.++|.+++..++|++|+..|++++.++|++..+|+++|.+|..+|+|++|+.+|+++++++|++..++..++.++.
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~ 396 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQK 396 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHH
Q 023518 82 KLEEYETAKVA 92 (281)
Q Consensus 82 ~~g~~~~A~~~ 92 (281)
.++++.+|...
T Consensus 397 ~~~~~~~a~~~ 407 (457)
T 1kt0_A 397 KAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988754
No 134
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.14 E-value=3e-10 Score=104.68 Aligned_cols=111 Identities=23% Similarity=0.186 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHH---ccCHHHHHHHHHHHHHcCCCcHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE------LFADRAQASIK---LQNFTEAVADANRAIELEPSMSKAYW 74 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~------~~~~~a~~~~~---l~~~~~A~~~~~~al~l~p~~~~a~~ 74 (281)
.+...|..++..|+|++|+..|.+++...|++.. ++..+|.++.. +|++++|+..+++++.++|++..+++
T Consensus 374 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 453 (514)
T 2gw1_A 374 VPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKI 453 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 4556677777777777777777777777666643 67777777777 77777777777777777777777777
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023518 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 114 (281)
.+|.+|..+|++++|...|+++++++|++......+....
T Consensus 454 ~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 493 (514)
T 2gw1_A 454 GLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAE 493 (514)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 7777777777777777777777777777766655554443
No 135
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.13 E-value=5e-10 Score=83.34 Aligned_cols=84 Identities=24% Similarity=0.173 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.+++..+|++..+++.+|.++..+|++++|+..+++++.++|.+..+++.+|.++..
T Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 47 VYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK 126 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcH
Q 023518 83 LEEY 86 (281)
Q Consensus 83 ~g~~ 86 (281)
+|++
T Consensus 127 ~~~~ 130 (131)
T 2vyi_A 127 LREA 130 (131)
T ss_dssp HTTC
T ss_pred HhcC
Confidence 9875
No 136
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.13 E-value=1.2e-10 Score=108.86 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=90.6
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHH--
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-- 79 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-- 79 (281)
+..+...|..++..|+|++|+..|+++++.+|+++.+++++|.+|..+|++++|+..++++++++|++..++..++.+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~ 119 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 119 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 356788999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHhhcHHHHHHHHH-----------HhhhcCCCC
Q 023518 80 CMKLEEYETAKVALE-----------KGASLAPGD 103 (281)
Q Consensus 80 ~~~~g~~~~A~~~~~-----------~a~~~~p~~ 103 (281)
+..+|+|++|+..++ +++.++|..
T Consensus 120 ~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 120 IVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 899999999999999 777777653
No 137
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.12 E-value=4.5e-10 Score=91.58 Aligned_cols=95 Identities=16% Similarity=0.068 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|.+++..|+|++|+..|.+++..+|++..+++.+|.+|..+|++++|+..|++++.++|.+..++..++.++..
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 168 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 168 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHH-HHHHHhh
Q 023518 83 LEEYETAK-VALEKGA 97 (281)
Q Consensus 83 ~g~~~~A~-~~~~~a~ 97 (281)
++++.++. ..|.+.+
T Consensus 169 ~~~~~~~~~~~~~~~f 184 (198)
T 2fbn_A 169 LKEARKKDKLTFGGMF 184 (198)
T ss_dssp HHHHHC----------
T ss_pred HHHHHHHHHHHHHHHh
Confidence 99998887 4444433
No 138
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.12 E-value=1.3e-09 Score=95.21 Aligned_cols=106 Identities=13% Similarity=0.094 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHH-------hcCH-------HHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC
Q 023518 3 TDLEKKAKEAFI-------DDYF-------ELAYDLYSQAIE-ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP 67 (281)
Q Consensus 3 ~~l~~~g~~~~~-------~~~y-------~~Al~~y~~al~-~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p 67 (281)
+.++..|..+.. .|++ ++|+..|++++. .+|++..+|..+|.++..+|++++|...|+++++++|
T Consensus 51 ~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 130 (308)
T 2ond_A 51 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIED 130 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccc
Confidence 456667777653 4775 999999999999 7999999999999999999999999999999999999
Q ss_pred CcHH-HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHH
Q 023518 68 SMSK-AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (281)
Q Consensus 68 ~~~~-a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~ 108 (281)
.+.. +|..+|.++.+.|++++|+..|+++++.+|.+..++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 172 (308)
T 2ond_A 131 IDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYV 172 (308)
T ss_dssp SCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHH
T ss_pred cCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 9887 9999999999999999999999999999998765543
No 139
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.12 E-value=6.7e-10 Score=87.25 Aligned_cols=105 Identities=10% Similarity=0.076 Sum_probs=96.4
Q ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHcC-C-CcHHHHHHHHHHHHHhhcHHHHH
Q 023518 16 DYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ---NFTEAVADANRAIELE-P-SMSKAYWRKATACMKLEEYETAK 90 (281)
Q Consensus 16 ~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~---~~~~A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~g~~~~A~ 90 (281)
.....+.+.|.+.+..++.+.+..+++|.|+.+.+ ++.+++..++.+++.+ | +..+++|.+|++|+++|+|++|+
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~ 91 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 91 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHH
Confidence 34567888899999988999999999999999988 7789999999999998 7 57899999999999999999999
Q ss_pred HHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 91 VALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 91 ~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.+++++++.+|++.++......+..++.+.
T Consensus 92 ~y~~~lL~ieP~n~QA~~Lk~~ie~~~~kd 121 (152)
T 1pc2_A 92 KYVRGLLQTEPQNNQAKELERLIDKAMKKD 121 (152)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999888775
No 140
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.12 E-value=5.6e-10 Score=96.21 Aligned_cols=117 Identities=9% Similarity=0.148 Sum_probs=101.5
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHc------CCCcHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----AELFADRAQASIKLQNFTEAVADANRAIEL------EPSMSKA 72 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~----~~~~~~~a~~~~~l~~~~~A~~~~~~al~l------~p~~~~a 72 (281)
..++..|..++..|+|++|+..|++++...|++ ..++..+|.++..+|++++|+..+++++.+ .+....+
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 85 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKA 85 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 467889999999999999999999999999998 478889999999999999999999999987 4456789
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChh------HHHHHHHHHHHHHh
Q 023518 73 YWRKATACMKLEEYETAKVALEKGASLAPGDSR------FTNLIKECEERIAE 119 (281)
Q Consensus 73 ~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~------~~~~l~~~~~~l~~ 119 (281)
++.+|.++..+|++++|..++++++++.+.... ....++.+...+++
T Consensus 86 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 86 SGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 999999999999999999999999988664433 55566666666665
No 141
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.12 E-value=4.6e-10 Score=88.51 Aligned_cols=86 Identities=13% Similarity=0.051 Sum_probs=77.8
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcH-HHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS-KAYWRKATACM 81 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~-~a~~~~g~~~~ 81 (281)
..+.+.|.+++..|+|++|+..|++++.++|+++.+|+.+|.+|..+|+|++|+.+|++++.++|++. .+...++.+..
T Consensus 64 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~ 143 (162)
T 3rkv_A 64 PLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTE 143 (162)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999998 66777777777
Q ss_pred HhhcHHH
Q 023518 82 KLEEYET 88 (281)
Q Consensus 82 ~~g~~~~ 88 (281)
.++++.+
T Consensus 144 ~~~~~~~ 150 (162)
T 3rkv_A 144 RRAEKKA 150 (162)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 6665543
No 142
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.10 E-value=8.8e-11 Score=104.73 Aligned_cols=102 Identities=11% Similarity=-0.010 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHH-HHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-CMK 82 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~~~ 82 (281)
.+.+.|.+++..++|++|+..|++++..+|++..+|+++|.+|..+|+|++|+.+|+++++++|++..++..++.+ ...
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~ 311 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQE 311 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 5778999999999999999999999999999999999999999999999999999999999999999999999988 445
Q ss_pred hhcHHHHHHHHHHhhhcCCCChh
Q 023518 83 LEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~~~~ 105 (281)
.+.++++...|.+++...|.+..
T Consensus 312 ~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 312 KALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp -----------------------
T ss_pred HHHHHHHHHHHHHhhCCCCCCCC
Confidence 67788899999999999987763
No 143
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.10 E-value=1.6e-10 Score=83.89 Aligned_cols=88 Identities=20% Similarity=0.214 Sum_probs=81.8
Q ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCC--ChhHHHH
Q 023518 32 SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG--DSRFTNL 109 (281)
Q Consensus 32 ~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~--~~~~~~~ 109 (281)
+|++..+++.+|.++...|++++|+..+++++.++|.+..+++.+|.+++.+|++++|+.+|+++++.+|. +..++..
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 67888899999999999999999999999999999999999999999999999999999999999999999 8888888
Q ss_pred HHHHHHHH-Hh
Q 023518 110 IKECEERI-AE 119 (281)
Q Consensus 110 l~~~~~~l-~~ 119 (281)
++.+...+ ++
T Consensus 82 l~~~~~~~~~~ 92 (112)
T 2kck_A 82 KADALRYIEGK 92 (112)
T ss_dssp HHHHHTTCSSC
T ss_pred HHHHHHHHhCC
Confidence 88887665 44
No 144
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.10 E-value=6.7e-10 Score=93.71 Aligned_cols=97 Identities=21% Similarity=0.192 Sum_probs=90.3
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------C
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL--------E 66 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~--------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l--------~ 66 (281)
..+...|..++..|+|++|+.+|.+++.. +|....++.++|.+|..+|++++|+..+++++.+ .
T Consensus 86 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 165 (283)
T 3edt_B 86 ATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDD 165 (283)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 45778899999999999999999999998 4666889999999999999999999999999998 7
Q ss_pred CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023518 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 67 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~ 99 (281)
|....+++.+|.+|..+|++++|..+|++++++
T Consensus 166 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 166 PNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 777889999999999999999999999999986
No 145
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.10 E-value=7.1e-10 Score=83.12 Aligned_cols=83 Identities=18% Similarity=0.159 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.+++..+|++..+++.+|.++..+|++++|+..+++++.++|.+..+++.++.++..
T Consensus 51 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 51 KLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA 130 (133)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 45788899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhc
Q 023518 83 LEE 85 (281)
Q Consensus 83 ~g~ 85 (281)
+|+
T Consensus 131 ~~~ 133 (133)
T 2lni_A 131 QYN 133 (133)
T ss_dssp HTC
T ss_pred hcC
Confidence 774
No 146
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.10 E-value=5.7e-10 Score=99.48 Aligned_cols=118 Identities=10% Similarity=0.162 Sum_probs=102.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHc------CCCcHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----AELFADRAQASIKLQNFTEAVADANRAIEL------EPSMSK 71 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~----~~~~~~~a~~~~~l~~~~~A~~~~~~al~l------~p~~~~ 71 (281)
+..++..|..++..|+|++|+..|++++...|.+ ..++..+|.++..+|++++|+..+++++.+ .+....
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 88 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAK 88 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 4567899999999999999999999999999998 468999999999999999999999999987 345578
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh------hHHHHHHHHHHHHHh
Q 023518 72 AYWRKATACMKLEEYETAKVALEKGASLAPGDS------RFTNLIKECEERIAE 119 (281)
Q Consensus 72 a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~------~~~~~l~~~~~~l~~ 119 (281)
+++.+|.++..+|++++|..+|++++.+.+... .....++.+...+++
T Consensus 89 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 89 ASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999876432 256666777666666
No 147
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.09 E-value=3.4e-09 Score=90.34 Aligned_cols=109 Identities=11% Similarity=0.051 Sum_probs=82.3
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWRKA 77 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~----l~~~~~A~~~~~~al~l~p~~~~a~~~~g 77 (281)
+..++..|..++..+++++|+.+|.++++ +.+..+++.+|.+|.. .+++++|+..|++++.++ +..+++.+|
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg 81 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLG 81 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHH
Confidence 34667778888888888888888888877 5667778888888888 888888888888888775 677788888
Q ss_pred HHHHH----hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023518 78 TACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 78 ~~~~~----~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 116 (281)
.+|.. .+++++|+.+|+++++.+ +......++.+...
T Consensus 82 ~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 122 (273)
T 1ouv_A 82 NLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHD 122 (273)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHc
Confidence 88888 888888888888887764 55555555555443
No 148
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.08 E-value=1.8e-09 Score=102.88 Aligned_cols=116 Identities=7% Similarity=-0.015 Sum_probs=109.6
Q ss_pred hHHHHHHHHHHHhcC----------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHcCCCcH
Q 023518 3 TDLEKKAKEAFIDDY----------FELAYDLYSQAIEISPNSAELFADRAQASIKLQ--NFTEAVADANRAIELEPSMS 70 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~----------y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~--~~~~A~~~~~~al~l~p~~~ 70 (281)
..|..+|..+...++ |++|++.|+++++.+|.+..+|..|+.++.+++ ++++|+.+++++++++|.+.
T Consensus 64 taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~ 143 (567)
T 1dce_A 64 TLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF 143 (567)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccc
Confidence 467888999988888 999999999999999999999999999999999 77999999999999999999
Q ss_pred HHHHHHHHHHHHhh-cHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023518 71 KAYWRKATACMKLE-EYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 71 ~a~~~~g~~~~~~g-~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~ 118 (281)
.+|..+|.++..+| .++++++++.++++.+|.+..+|..+..+...+.
T Consensus 144 ~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~ 192 (567)
T 1dce_A 144 HCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLH 192 (567)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhc
Confidence 99999999999999 9999999999999999999999999988876654
No 149
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.06 E-value=7.8e-10 Score=82.54 Aligned_cols=72 Identities=11% Similarity=-0.038 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYW 74 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~ 74 (281)
..++..|..++..|+|++|+..|.++++.+|+++.+++++|.++..+|++++|+..+++++.+.|++.....
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999876543
No 150
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.05 E-value=5.9e-10 Score=85.85 Aligned_cols=99 Identities=16% Similarity=0.145 Sum_probs=86.9
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC------c
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPS------M 69 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~------~ 69 (281)
+..+...|..++..|+|++|+..|.+++...+.. ..++..+|.++..+|++++|+..+++++.+.+. .
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 4567889999999999999999999999885432 257899999999999999999999999987654 2
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcC
Q 023518 70 SKAYWRKATACMKLEEYETAKVALEKGASLA 100 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~ 100 (281)
..+++.+|.++..+|++++|..++++++.+.
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999874
No 151
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.05 E-value=1.7e-09 Score=97.65 Aligned_cols=90 Identities=20% Similarity=0.194 Sum_probs=85.7
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+.+.|.+++..++|++|+.+|+++++.+|+++.+++++|.+|..+|+|++|+.+|++|++++|++..++..++.++..
T Consensus 274 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~ 353 (370)
T 1ihg_A 274 SCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQK 353 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHH
Q 023518 83 LEEYETAKVA 92 (281)
Q Consensus 83 ~g~~~~A~~~ 92 (281)
+++++++...
T Consensus 354 ~~~~~~a~k~ 363 (370)
T 1ihg_A 354 IKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999988754
No 152
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.05 E-value=5.4e-10 Score=95.92 Aligned_cols=118 Identities=21% Similarity=0.244 Sum_probs=100.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC--------
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIELE-------- 66 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~--------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~-------- 66 (281)
..+...|..++..|+|++|+..|.+++.. .+....++..+|.+|..+|++++|+..+++++.+.
T Consensus 70 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 70 TMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 45678899999999999999999999987 35557889999999999999999999999999874
Q ss_pred CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc--------CCCChhHHHHHHHHHHHHHhh
Q 023518 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL--------APGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 67 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~--------~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+....+++.+|.++..+|++++|+.+|++++.+ .|........++.+...+++.
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 211 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKF 211 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 566889999999999999999999999999998 444445566666666655554
No 153
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.04 E-value=5.7e-10 Score=100.13 Aligned_cols=117 Identities=14% Similarity=0.147 Sum_probs=75.2
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS-------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------ 69 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~-------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------ 69 (281)
..+...|..++..|+|++|+..|.++++..+.. ..++.++|.+|..+|+|++|+..+++++.+.+..
T Consensus 144 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 223 (383)
T 3ulq_A 144 EFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLM 223 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHH
Confidence 455667777777777777777777777763322 3466777777777777777777777777664322
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhh-----cC-CCChhHHHHHHHHHHHHHh
Q 023518 70 SKAYWRKATACMKLEEYETAKVALEKGAS-----LA-PGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~-----~~-p~~~~~~~~l~~~~~~l~~ 119 (281)
..+++++|.+|..+|++++|+.+|+++++ .+ |....+...++.+...+++
T Consensus 224 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 279 (383)
T 3ulq_A 224 GRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGK 279 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCC
Confidence 34677777777777777777777777777 33 4444445555555444433
No 154
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.04 E-value=9e-10 Score=87.44 Aligned_cols=85 Identities=18% Similarity=0.159 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-------cHH-----HHHHHHHHHHHhhcHHHHHHHHHHhhhc----
Q 023518 36 AELFADRAQASIKLQNFTEAVADANRAIELEPS-------MSK-----AYWRKATACMKLEEYETAKVALEKGASL---- 99 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~-------~~~-----a~~~~g~~~~~~g~~~~A~~~~~~a~~~---- 99 (281)
+..+.++|..++++|+|++|+..|++|++++|+ +.. +|+++|.++..+|+|++|+.+|.+++++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 567899999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---CCCChhHH----HHHHHHHHHHHhh
Q 023518 100 ---APGDSRFT----NLIKECEERIAEE 120 (281)
Q Consensus 100 ---~p~~~~~~----~~l~~~~~~l~~~ 120 (281)
+|++..++ ..++.+...+++.
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~ 118 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRG 118 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCH
Confidence 99998888 8888887777665
No 155
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.04 E-value=1.9e-09 Score=77.51 Aligned_cols=78 Identities=15% Similarity=0.238 Sum_probs=69.8
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHH-HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHH--HHHHHHHH
Q 023518 39 FADRAQASIKLQNFTEAVADANRAIELEPSMSK-AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT--NLIKECEE 115 (281)
Q Consensus 39 ~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~-a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~--~~l~~~~~ 115 (281)
.+.+|.++...|+|++|+..+++++.++|.+.. +++.+|.+|+.+|++++|+.+|+++++++|++..+. ..+..+..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~~ 82 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQARKMVMDILN 82 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999 999999999999999999999999999999999877 33444433
Q ss_pred H
Q 023518 116 R 116 (281)
Q Consensus 116 ~ 116 (281)
.
T Consensus 83 ~ 83 (99)
T 2kc7_A 83 F 83 (99)
T ss_dssp H
T ss_pred H
Confidence 3
No 156
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.03 E-value=8e-10 Score=94.85 Aligned_cols=97 Identities=20% Similarity=0.208 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------C
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEIS--------PNSAELFADRAQASIKLQNFTEAVADANRAIEL--------E 66 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~--------p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l--------~ 66 (281)
..+...|..++..|+|++|+..|.+++... +....++..+|.++..+|++++|+..+++++.+ .
T Consensus 112 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 191 (311)
T 3nf1_A 112 ATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDD 191 (311)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTC
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 456788999999999999999999999874 555778999999999999999999999999998 6
Q ss_pred CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023518 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 67 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~ 99 (281)
+....+++.+|.+|..+|++++|..+|+++++.
T Consensus 192 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 192 PNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 777889999999999999999999999999975
No 157
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.02 E-value=1.1e-09 Score=94.78 Aligned_cols=116 Identities=17% Similarity=0.101 Sum_probs=94.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcH-----HHH--H
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS-----KAY--W 74 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~-----~a~--~ 74 (281)
+..+...|..++..|+|++|+..|+++++.+|++..+++++|.+|..+|++++|+..|++++.++|++. .++ +
T Consensus 38 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~ 117 (281)
T 2c2l_A 38 AVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSAL 117 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHH
Confidence 346788999999999999999999999999999999999999999999999999999999999987541 111 1
Q ss_pred HHH----------------------HHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023518 75 RKA----------------------TACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 75 ~~g----------------------~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l 117 (281)
+++ ...+..|++++|+..|+++++++|++..+...+..+....
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 182 (281)
T 2c2l_A 118 RIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEAKH 182 (281)
T ss_dssp HHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHTTTSGGGTTTSCHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhhhHHHHHHHHH
Confidence 111 1122478999999999999999998877666555544443
No 158
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.02 E-value=2.7e-09 Score=101.69 Aligned_cols=114 Identities=10% Similarity=-0.025 Sum_probs=107.0
Q ss_pred hHHHHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDD--YFELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATA 79 (281)
Q Consensus 3 ~~l~~~g~~~~~~~--~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 79 (281)
..|..++..+...+ +|++|++.++++++.+|.+..+|..|+.++..++ .+++++++++++++.+|.+..+|..+|.+
T Consensus 108 ~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~l 187 (567)
T 1dce_A 108 GTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 187 (567)
T ss_dssp HHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHH
Confidence 46888999999999 7799999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHh--------------hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023518 80 CMKL--------------EEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 80 ~~~~--------------g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 116 (281)
+..+ +.+++|++++.+|+..+|++..+|..++.+...
T Consensus 188 l~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~ 238 (567)
T 1dce_A 188 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGR 238 (567)
T ss_dssp HHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSC
T ss_pred HHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhc
Confidence 9986 789999999999999999999999998887543
No 159
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.02 E-value=7.4e-10 Score=96.06 Aligned_cols=97 Identities=20% Similarity=0.234 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc-------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC------cH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI-------SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS------MS 70 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~-------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~------~~ 70 (281)
.+...|..++..|+|++|+.+|.++++. .+....+++++|.+|..+|+|++|+..+++++.+.+. .+
T Consensus 157 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~ 236 (293)
T 3u3w_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIG 236 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 5788999999999999999999999953 1222568999999999999999999999999987643 38
Q ss_pred HHHHHHHHHHHHhh-cHHHHHHHHHHhhhcC
Q 023518 71 KAYWRKATACMKLE-EYETAKVALEKGASLA 100 (281)
Q Consensus 71 ~a~~~~g~~~~~~g-~~~~A~~~~~~a~~~~ 100 (281)
.+++.+|.+|..+| .+++|..+|++|+.+.
T Consensus 237 ~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 237 QLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 89999999999999 5799999999998753
No 160
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.02 E-value=2e-09 Score=78.33 Aligned_cols=83 Identities=18% Similarity=0.179 Sum_probs=70.7
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc--HHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATA 79 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~ 79 (281)
+..++..|..++..|+|++|+..|+++++.+|+++.+|+.+|.+|..+|++++|+..+++++.+.+.. ......+...
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~~ 86 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDA 86 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999987643 3444444444
Q ss_pred HHHhh
Q 023518 80 CMKLE 84 (281)
Q Consensus 80 ~~~~g 84 (281)
+...+
T Consensus 87 l~~~~ 91 (100)
T 3ma5_A 87 KLKAE 91 (100)
T ss_dssp HHHHH
T ss_pred HHHcc
Confidence 44443
No 161
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.02 E-value=1.1e-09 Score=88.60 Aligned_cols=98 Identities=15% Similarity=0.054 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc---CC----Cc
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL---EP----SM 69 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l---~p----~~ 69 (281)
..+...|..++..|+|++|+..|.+++.. .+....++.++|.+|..+|++++|+..+.+++.+ .+ ..
T Consensus 27 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 106 (203)
T 3gw4_A 27 GARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAA 106 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHH
Confidence 45778899999999999999999999984 3445678999999999999999999999999987 33 34
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcC
Q 023518 70 SKAYWRKATACMKLEEYETAKVALEKGASLA 100 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~ 100 (281)
..+++.+|.++..+|++++|..++++++.+.
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 107 SANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 6678999999999999999999999998764
No 162
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.02 E-value=4e-09 Score=92.84 Aligned_cols=116 Identities=8% Similarity=0.056 Sum_probs=107.2
Q ss_pred HHHHHHHHH----HHh---cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHH--HHHHHHHHHHHcCCCcHHHHH
Q 023518 4 DLEKKAKEA----FID---DYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFT--EAVADANRAIELEPSMSKAYW 74 (281)
Q Consensus 4 ~l~~~g~~~----~~~---~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~--~A~~~~~~al~l~p~~~~a~~ 74 (281)
.+..++..+ ... +++++++..+.++++.+|.+..+|..|+.++..++.++ ++++.+++++.++|.+..+|.
T Consensus 105 aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~ 184 (306)
T 3dra_A 105 IWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWS 184 (306)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHH
Confidence 566677777 555 78999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHhhc------HHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 75 RKATACMKLEE------YETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 75 ~~g~~~~~~g~------~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
.++.++..+++ +++++.++.+++..+|+|..++..+..+...++.
T Consensus 185 ~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 185 HRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDR 235 (306)
T ss_dssp HHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCC
Confidence 99999999998 9999999999999999999999999988776654
No 163
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.00 E-value=1.2e-09 Score=95.64 Aligned_cols=101 Identities=23% Similarity=0.247 Sum_probs=87.2
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------H
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~ 70 (281)
..+...|..+.. |+|++|+.+|.+++.+.+.. ..++.++|.+|..+|+|++|+..|++++.+.+.+ .
T Consensus 117 ~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 195 (307)
T 2ifu_A 117 MALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCY 195 (307)
T ss_dssp HHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHH
Confidence 456778888888 99999999999999986643 5788999999999999999999999999986543 4
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChh
Q 023518 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~ 105 (281)
.+++.+|.+++.+|++++|+.+|++++ ++|....
T Consensus 196 ~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 196 KKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCC
Confidence 578889999999999999999999999 9886543
No 164
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.00 E-value=2e-09 Score=93.27 Aligned_cols=98 Identities=20% Similarity=0.242 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHH---hcCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC------c
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAI---EISPNSA----ELFADRAQASIKLQNFTEAVADANRAIELEPS------M 69 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al---~~~p~~~----~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~------~ 69 (281)
..+...|..++..|+|++|+.+|.+++ +..+++. .+++++|.+|..+|+|++|+..+++++.+.+. .
T Consensus 156 ~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~ 235 (293)
T 2qfc_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALI 235 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 356677888888888888888888888 4455532 57888888888888888888888888876532 2
Q ss_pred HHHHHHHHHHHHHhhcHHHH-HHHHHHhhhcC
Q 023518 70 SKAYWRKATACMKLEEYETA-KVALEKGASLA 100 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A-~~~~~~a~~~~ 100 (281)
+.+++.+|.+|..+|++++| ..+|++++.+.
T Consensus 236 ~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 236 GQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 67888888888888888888 77788877653
No 165
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.99 E-value=5.8e-09 Score=90.36 Aligned_cols=114 Identities=11% Similarity=0.018 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHH---HcCCCc----HH
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAI---ELEPSM----SK 71 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al---~l~p~~----~~ 71 (281)
++..|..+...|+|++|+..|.+++...+.. ..++.++|.+|..+|+|++|+..+++++ ...+++ ..
T Consensus 118 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~ 197 (293)
T 2qfc_A 118 QYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVK 197 (293)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHH
Confidence 3456777788889999999999999875443 5689999999999999999999999999 444543 36
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC------hhHHHHHHHHHHHHH
Q 023518 72 AYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKECEERIA 118 (281)
Q Consensus 72 a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~------~~~~~~l~~~~~~l~ 118 (281)
+++++|.+|+.+|+|++|+.+|++++++.+.. ..+...++.+...++
T Consensus 198 ~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g 250 (293)
T 2qfc_A 198 VRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTT
T ss_pred HHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcC
Confidence 89999999999999999999999999875321 234455555555443
No 166
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.98 E-value=5.4e-09 Score=83.60 Aligned_cols=81 Identities=10% Similarity=-0.014 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc--HHHHHHHHHHHHHhhcHHHHHHHHHH
Q 023518 18 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATACMKLEEYETAKVALEK 95 (281)
Q Consensus 18 y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~g~~~~A~~~~~~ 95 (281)
..+|+..|.+++..+|+++.+++.+|.++..+|++++|+..|+++++++|+. ..+++.+|.++..+|++++|..+|++
T Consensus 90 ~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~ 169 (176)
T 2r5s_A 90 ESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRR 169 (176)
T ss_dssp SCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred cchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 3446777888888899999999999999999999999999999999999975 66999999999999999999999998
Q ss_pred hhh
Q 023518 96 GAS 98 (281)
Q Consensus 96 a~~ 98 (281)
++.
T Consensus 170 al~ 172 (176)
T 2r5s_A 170 QLY 172 (176)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
No 167
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.98 E-value=8.3e-09 Score=74.55 Aligned_cols=82 Identities=16% Similarity=0.046 Sum_probs=72.4
Q ss_pred CCCCHHHHHHHHHHHHHccC---HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHH
Q 023518 32 SPNSAELFADRAQASIKLQN---FTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (281)
Q Consensus 32 ~p~~~~~~~~~a~~~~~l~~---~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~ 108 (281)
+|+++.++..+|.+++..++ ..+|...+++++.++|++..+++.+|..++..|+|++|+.+|+++++.+|.++....
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~~ 81 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRVT 81 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHH
Confidence 68899999999999987766 799999999999999999999999999999999999999999999999998554433
Q ss_pred HHHHH
Q 023518 109 LIKEC 113 (281)
Q Consensus 109 ~l~~~ 113 (281)
....+
T Consensus 82 i~~~I 86 (93)
T 3bee_A 82 IIESI 86 (93)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 33333
No 168
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.98 E-value=4.8e-09 Score=92.35 Aligned_cols=113 Identities=4% Similarity=-0.203 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHH----HHc---cCHHHHHHHHHHHHHcCCCcHHHHH
Q 023518 4 DLEKKAKEAFIDD--YFELAYDLYSQAIEISPNSAELFADRAQAS----IKL---QNFTEAVADANRAIELEPSMSKAYW 74 (281)
Q Consensus 4 ~l~~~g~~~~~~~--~y~~Al~~y~~al~~~p~~~~~~~~~a~~~----~~l---~~~~~A~~~~~~al~l~p~~~~a~~ 74 (281)
.+..+|..+...+ ++++++..+.+++..+|.+..+|..|+.++ ..+ +++++++..+++++.++|.+..+|.
T Consensus 69 aWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~ 148 (306)
T 3dra_A 69 IWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWS 148 (306)
T ss_dssp HHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 4556666666666 777777777777777777777777777777 555 5677777777777777777777777
Q ss_pred HHHHHHHHhhcHH--HHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023518 75 RKATACMKLEEYE--TAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 75 ~~g~~~~~~g~~~--~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 116 (281)
.++.++..+|.++ +++.++.++++.+|.|-.++.....+...
T Consensus 149 ~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~ 192 (306)
T 3dra_A 149 YRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFS 192 (306)
T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHS
T ss_pred HHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 7777777777766 77777777777777776666655555433
No 169
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.98 E-value=4.3e-09 Score=91.35 Aligned_cols=104 Identities=17% Similarity=0.013 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHccCHHHHHHHHHHHHHcC--CC-cHHHHHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS--AELFADRAQASIKLQNFTEAVADANRAIELE--PS-MSKAYWRKAT 78 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~--~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~--p~-~~~a~~~~g~ 78 (281)
..+..|..+++.++|++|+.+|++++...... ..+++++|.++..+|++++|+.+|++++... |. ...+++++|.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gl 216 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAM 216 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHH
Confidence 35677888888888888888888776643111 3478888999999999999999999888544 54 6678889999
Q ss_pred HHHHhhcHHHHHHHHHHhhhcCCCChhHHH
Q 023518 79 ACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (281)
Q Consensus 79 ~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~ 108 (281)
++.++|+.++|...|++++..+|+ ..+..
T Consensus 217 aL~~lGr~deA~~~l~~a~a~~P~-~~~~~ 245 (282)
T 4f3v_A 217 ARRSQGNESAAVALLEWLQTTHPE-PKVAA 245 (282)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSCC-HHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCc-HHHHH
Confidence 999999999999999999999887 54433
No 170
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.98 E-value=8e-09 Score=75.99 Aligned_cols=82 Identities=23% Similarity=0.332 Sum_probs=77.3
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.+++..+|.+...+..+|.++..+|++++|+..+++++.++|.+..++..+|.++..
T Consensus 44 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 44 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hh
Q 023518 83 LE 84 (281)
Q Consensus 83 ~g 84 (281)
+|
T Consensus 124 ~g 125 (125)
T 1na0_A 124 QG 125 (125)
T ss_dssp HC
T ss_pred cc
Confidence 65
No 171
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.98 E-value=1.8e-08 Score=85.83 Aligned_cols=105 Identities=11% Similarity=0.078 Sum_probs=69.9
Q ss_pred HHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCCCcHHHHHH
Q 023518 4 DLEKKAKEAFI----DDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWR 75 (281)
Q Consensus 4 ~l~~~g~~~~~----~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~----l~~~~~A~~~~~~al~l~p~~~~a~~~ 75 (281)
.++..|..++. .+++++|+.+|.++++.+ ++.+++.+|.+|.. .+++++|+..+++++..+ +..+++.
T Consensus 40 a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~ 115 (273)
T 1ouv_A 40 GCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCAS 115 (273)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHH
T ss_pred HHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHH
Confidence 45566677777 777777777777777664 56677777777777 777777777777777663 5667777
Q ss_pred HHHHHHH----hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023518 76 KATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 76 ~g~~~~~----~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 114 (281)
+|.+|.. .+++++|+.+|+++++.+ +......++.+.
T Consensus 116 lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~ 156 (273)
T 1ouv_A 116 LGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLY 156 (273)
T ss_dssp HHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHH
Confidence 7777777 777777777777777664 333444444443
No 172
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.98 E-value=1.1e-08 Score=93.70 Aligned_cols=114 Identities=19% Similarity=0.163 Sum_probs=83.4
Q ss_pred HHHHHHHHHHH--hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc--------------------------------
Q 023518 4 DLEKKAKEAFI--DDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-------------------------------- 49 (281)
Q Consensus 4 ~l~~~g~~~~~--~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l-------------------------------- 49 (281)
.+...|..+.. .++|++|+.+|.+++..+|+++.++..+|.++..+
T Consensus 138 ~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~ 217 (472)
T 4g1t_A 138 LDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLAL 217 (472)
T ss_dssp HHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHH
Confidence 34455655544 45788888888888888888877777766665432
Q ss_pred ---------cCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023518 50 ---------QNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 50 ---------~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l 117 (281)
+++++|+..+++++.++|.+..+++.+|.+|...|++++|+..|+++++.+|++..+...++.+....
T Consensus 218 ~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~ 294 (472)
T 4g1t_A 218 KLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAK 294 (472)
T ss_dssp HHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHH
Confidence 34455666666666677777778888888999999999999999999999999888887777776543
No 173
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.97 E-value=2.8e-09 Score=81.96 Aligned_cols=99 Identities=15% Similarity=0.193 Sum_probs=86.7
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC------CcH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEP------SMS 70 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p------~~~ 70 (281)
..+...|..++..|+|++|+..|.+++...+.. ..++.++|.++..+|++++|+..+++++.+.+ ...
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 357788999999999999999999999875443 56899999999999999999999999998743 236
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCC
Q 023518 71 KAYWRKATACMKLEEYETAKVALEKGASLAP 101 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p 101 (281)
.+++.+|.++..+|++++|..++++++++..
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999987654
No 174
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.97 E-value=1.4e-09 Score=94.24 Aligned_cols=112 Identities=11% Similarity=0.031 Sum_probs=91.7
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-------CCCcHHHH
Q 023518 7 KKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIEL-------EPSMSKAY 73 (281)
Q Consensus 7 ~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-------~p~~~~a~ 73 (281)
..|..++..++|++|+..|.+++...... ..++.++|.+|..+|+|++|+..|++++.. .+....++
T Consensus 120 ~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 199 (293)
T 3u3w_A 120 YVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVR 199 (293)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHH
Confidence 46777888889999999999999964432 347899999999999999999999999952 22346689
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHhhhcCCCC------hhHHHHHHHHHHHHH
Q 023518 74 WRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKECEERIA 118 (281)
Q Consensus 74 ~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~------~~~~~~l~~~~~~l~ 118 (281)
+++|.+|+.+|+|++|+.++++++++.+.. ..+...++.+...++
T Consensus 200 ~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 200 YNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999876443 345666777766666
No 175
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.96 E-value=1.2e-09 Score=98.08 Aligned_cols=114 Identities=18% Similarity=0.165 Sum_probs=94.2
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhc---CCC---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC-------CcHHH
Q 023518 6 EKKAKEAFIDDYFELAYDLYSQAIEI---SPN---SAELFADRAQASIKLQNFTEAVADANRAIELEP-------SMSKA 72 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~---~p~---~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p-------~~~~a 72 (281)
+.+|..++..|+|++|+..|.+++.. .++ .+.++..+|.+|..+|++++|+..+.+|+.+.+ ..+.+
T Consensus 107 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 186 (383)
T 3ulq_A 107 FFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQC 186 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHH
Confidence 34899999999999999999999987 233 468899999999999999999999999999843 34568
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh------hHHHHHHHHHHHHHh
Q 023518 73 YWRKATACMKLEEYETAKVALEKGASLAPGDS------RFTNLIKECEERIAE 119 (281)
Q Consensus 73 ~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~------~~~~~l~~~~~~l~~ 119 (281)
+..+|.+|..+|+|++|..+|++++++.+... .+...++.+...+++
T Consensus 187 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~ 239 (383)
T 3ulq_A 187 HSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQ 239 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCC
Confidence 99999999999999999999999998865433 244555665554444
No 176
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=7.6e-09 Score=78.99 Aligned_cols=90 Identities=19% Similarity=0.249 Sum_probs=83.4
Q ss_pred cCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHH
Q 023518 31 ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM---SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (281)
Q Consensus 31 ~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~---~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~ 107 (281)
.++.+...++.+|.+++..|+|++|+..|++++.++|++ ..+++.+|.+|+.+|+|++|+.+|+++++++|.+..++
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 102 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKAL 102 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHH
Confidence 457789999999999999999999999999999999997 89999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhh
Q 023518 108 NLIKECEERIAEE 120 (281)
Q Consensus 108 ~~l~~~~~~l~~~ 120 (281)
..++.+...+++.
T Consensus 103 ~~~a~~~~~~~~~ 115 (148)
T 2dba_A 103 YRRSQALEKLGRL 115 (148)
T ss_dssp HHHHHHHHHHTCH
T ss_pred HHHHHHHHHcCCH
Confidence 8888887776664
No 177
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.94 E-value=2.2e-08 Score=88.96 Aligned_cols=111 Identities=9% Similarity=-0.034 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDD--YFELAYDLYSQAIEISPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATA 79 (281)
Q Consensus 3 ~~l~~~g~~~~~~~--~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~-~~~A~~~~~~al~l~p~~~~a~~~~g~~ 79 (281)
..+..++..+...+ +|++++.++.++++.+|.|..+|..|+.++..+|. ++++++++++++..+|.+..+|..++.+
T Consensus 109 ~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~l 188 (331)
T 3dss_A 109 GTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 188 (331)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 35677788888777 48999999999999999999999999999999988 6899999999999999999999999999
Q ss_pred HHHh--------------hcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023518 80 CMKL--------------EEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 80 ~~~~--------------g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 113 (281)
+..+ +.+++++.++.+++..+|+|..++..+..+
T Consensus 189 l~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~l 236 (331)
T 3dss_A 189 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWL 236 (331)
T ss_dssp HHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 8888 678999999999999999999888765544
No 178
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.94 E-value=7.4e-09 Score=75.49 Aligned_cols=86 Identities=17% Similarity=0.183 Sum_probs=79.5
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023518 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 35 ~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 114 (281)
.+..++.+|.++...|++++|+..+++++..+|.+..+++.+|.+++.+|++++|..+++++++.+|.+..+...++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999998888888887
Q ss_pred HHHHhh
Q 023518 115 ERIAEE 120 (281)
Q Consensus 115 ~~l~~~ 120 (281)
..+++.
T Consensus 83 ~~~~~~ 88 (118)
T 1elw_A 83 EFLNRF 88 (118)
T ss_dssp HHTTCH
T ss_pred HHHhhH
Confidence 766554
No 179
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.93 E-value=1.4e-09 Score=95.16 Aligned_cols=101 Identities=11% Similarity=0.039 Sum_probs=87.7
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------H
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~ 70 (281)
..+.+.|..+...|+|++|+.+|.+++.+.+.. ..++.++|.+|.. |++++|+..|++|+.+.+.. .
T Consensus 77 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~ 155 (307)
T 2ifu_A 77 KAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAA 155 (307)
T ss_dssp HHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHH
Confidence 456778899999999999999999999884322 4678999999999 99999999999999987643 6
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh
Q 023518 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~ 104 (281)
.++..+|.+|..+|+|++|+.+|++++.+.+.+.
T Consensus 156 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 156 ELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 7899999999999999999999999999876543
No 180
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.93 E-value=1.1e-08 Score=91.70 Aligned_cols=101 Identities=15% Similarity=0.037 Sum_probs=90.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHccCHHHHHHHHHHHHH-----cCCCcH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN------SAELFADRAQASIKLQNFTEAVADANRAIE-----LEPSMS 70 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~------~~~~~~~~a~~~~~l~~~~~A~~~~~~al~-----l~p~~~ 70 (281)
+..+...|..+...|+|++|+..|.++++..+. ...++.++|.+|..+|++++|+..+++++. .+|...
T Consensus 182 ~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 261 (378)
T 3q15_A 182 IQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLP 261 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHH
Confidence 345678999999999999999999999987321 246889999999999999999999999999 778889
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCC
Q 023518 71 KAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~ 102 (281)
.+++.+|.+++.+|++++|..++++++++.+.
T Consensus 262 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 262 KVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998654
No 181
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.93 E-value=2.2e-09 Score=95.61 Aligned_cols=97 Identities=16% Similarity=0.178 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------HH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA------ELFADRAQASIKLQNFTEAVADANRAIELEPSM------SK 71 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~------~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~~ 71 (281)
.+...|..++..|+|++|+..|.+++...+... .++..+|.+|..+|++++|+..+++++.+.+.. ..
T Consensus 189 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 268 (406)
T 3sf4_A 189 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQ 268 (406)
T ss_dssp HHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHH
Confidence 344556666666666666666666665533321 255566666666666666666666666554433 44
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhhhcC
Q 023518 72 AYWRKATACMKLEEYETAKVALEKGASLA 100 (281)
Q Consensus 72 a~~~~g~~~~~~g~~~~A~~~~~~a~~~~ 100 (281)
+++.+|.+|..+|++++|..+|++++.+.
T Consensus 269 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 297 (406)
T 3sf4_A 269 SCYSLGNTYTLLQDYEKAIDYHLKHLAIA 297 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 55556666666666666666666665543
No 182
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.92 E-value=4.8e-09 Score=94.03 Aligned_cols=119 Identities=13% Similarity=0.029 Sum_probs=94.8
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC------C
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN-------SAELFADRAQASIKLQNFTEAVADANRAIELEP------S 68 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~-------~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p------~ 68 (281)
+..+...|..++..|+|+.|+..|.+++...+. .+.++.++|.+|..+|+|++|+..+.+++.+.+ .
T Consensus 141 a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 220 (378)
T 3q15_A 141 AEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRF 220 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 345677888999999999999999999887432 245788899999999999999999999998643 2
Q ss_pred cHHHHHHHHHHHHHhhcHHHHHHHHHHhhh-----cCCCChhHHHHHHHHHHHHHhh
Q 023518 69 MSKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 69 ~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~-----~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
...+++++|.+|..+|++++|+.+|++++. .+|........++.+...+++.
T Consensus 221 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~ 277 (378)
T 3q15_A 221 IAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQT 277 (378)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCH
Confidence 356888899999999999999999999998 6666666667777776655554
No 183
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.91 E-value=6.8e-09 Score=90.08 Aligned_cols=89 Identities=10% Similarity=-0.018 Sum_probs=77.9
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc--HHHHHHHHHHHHHhhcHH
Q 023518 10 KEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATACMKLEEYE 87 (281)
Q Consensus 10 ~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~g~~~ 87 (281)
..+...+++++|+..|.+++..+|++..+++++|.+|...|++++|+..+.++++++|++ ..++.++|.++..+|+.+
T Consensus 193 ~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 272 (287)
T 3qou_A 193 IELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGD 272 (287)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTC
T ss_pred HHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCC
Confidence 334444445555666777788899999999999999999999999999999999999998 899999999999999999
Q ss_pred HHHHHHHHhhh
Q 023518 88 TAKVALEKGAS 98 (281)
Q Consensus 88 ~A~~~~~~a~~ 98 (281)
+|...|++++.
T Consensus 273 ~a~~~~r~al~ 283 (287)
T 3qou_A 273 ALASXYRRQLY 283 (287)
T ss_dssp HHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 99999998875
No 184
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.91 E-value=4e-08 Score=87.29 Aligned_cols=116 Identities=6% Similarity=-0.029 Sum_probs=104.9
Q ss_pred hHHHHHHHHHHHhcC----------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccC--HHHHHHHHHHHHHcCCCcH
Q 023518 3 TDLEKKAKEAFIDDY----------FELAYDLYSQAIEISPNSAELFADRAQASIKLQN--FTEAVADANRAIELEPSMS 70 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~----------y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~--~~~A~~~~~~al~l~p~~~ 70 (281)
..+..++..+...+. +++++.++..++..+|.+..+|..|+.++..+++ +++++..+++++.++|.+.
T Consensus 65 taWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy 144 (331)
T 3dss_A 65 TLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF 144 (331)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCH
Confidence 355667777766554 7999999999999999999999999999999994 9999999999999999999
Q ss_pred HHHHHHHHHHHHhhc-HHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023518 71 KAYWRKATACMKLEE-YETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~-~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~ 118 (281)
.+|..++.++..+|. +++++.++.++++.+|.|..++..+..+-..+.
T Consensus 145 ~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~ 193 (331)
T 3dss_A 145 HCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLH 193 (331)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhh
Confidence 999999999999999 699999999999999999999999888876653
No 185
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.90 E-value=5.6e-09 Score=82.74 Aligned_cols=69 Identities=20% Similarity=0.205 Sum_probs=63.5
Q ss_pred hhHHHHHHHHHHHhcCH----------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc-----------CHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYF----------ELAYDLYSQAIEISPNSAELFADRAQASIKLQ-----------NFTEAVADAN 60 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y----------~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~-----------~~~~A~~~~~ 60 (281)
++.+++.|.++...+++ ++|+..|+++|+++|++..+|+++|.+|..+| +|++|+.+|+
T Consensus 36 aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~ 115 (158)
T 1zu2_A 36 ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQ 115 (158)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHH
Confidence 46788899999988775 59999999999999999999999999999885 8999999999
Q ss_pred HHHHcCCCcH
Q 023518 61 RAIELEPSMS 70 (281)
Q Consensus 61 ~al~l~p~~~ 70 (281)
+|+.++|++.
T Consensus 116 kAl~l~P~~~ 125 (158)
T 1zu2_A 116 QAVDEQPDNT 125 (158)
T ss_dssp HHHHHCTTCH
T ss_pred HHHHhCCCCH
Confidence 9999999985
No 186
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.90 E-value=1.2e-08 Score=84.42 Aligned_cols=94 Identities=16% Similarity=0.068 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc----CHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ----NFTEAVADANRAIELEPSMSKAYWRKAT 78 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~----~~~~A~~~~~~al~l~p~~~~a~~~~g~ 78 (281)
..++..|..++..+++++|+.+|.++++. .++.+++++|.+|.. + ++++|+.+|++++. +.++.+++.+|.
T Consensus 19 ~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~ 93 (212)
T 3rjv_A 19 RAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLAR 93 (212)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHH
Confidence 34455555665566666666666665553 345555555555554 4 55555555555533 234445555555
Q ss_pred HHHH----hhcHHHHHHHHHHhhhcCC
Q 023518 79 ACMK----LEEYETAKVALEKGASLAP 101 (281)
Q Consensus 79 ~~~~----~g~~~~A~~~~~~a~~~~p 101 (281)
+|.. .+++++|+.+|+++.+..+
T Consensus 94 ~y~~g~g~~~d~~~A~~~~~~A~~~~~ 120 (212)
T 3rjv_A 94 VLVNRQAGATDVAHAITLLQDAARDSE 120 (212)
T ss_dssp HHTCGGGSSCCHHHHHHHHHHHTSSTT
T ss_pred HHHcCCCCccCHHHHHHHHHHHHHcCC
Confidence 5544 4455555555555554444
No 187
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.89 E-value=1.1e-08 Score=84.64 Aligned_cols=111 Identities=14% Similarity=-0.003 Sum_probs=98.4
Q ss_pred hhHHHHHHHHHHHhc----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCC--CcHH
Q 023518 2 ATDLEKKAKEAFIDD----YFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEP--SMSK 71 (281)
Q Consensus 2 a~~l~~~g~~~~~~~----~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~----l~~~~~A~~~~~~al~l~p--~~~~ 71 (281)
+..++..|..++. + ++++|+.+|.++++. .++.+++++|.+|.. .+++.+|+.+|++++..++ .++.
T Consensus 50 ~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~ 126 (212)
T 3rjv_A 50 GDALALLAQLKIR-NPQQADYPQARQLAEKAVEA--GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVD 126 (212)
T ss_dssp HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHH
T ss_pred HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHH
Confidence 3467778888887 7 999999999999764 689999999999998 8899999999999999998 4589
Q ss_pred HHHHHHHHHHH----hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023518 72 AYWRKATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 72 a~~~~g~~~~~----~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 116 (281)
+++.+|.+|.. .+++++|+.+|+++.++ +++......++.+...
T Consensus 127 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 127 AQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQ 174 (212)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHc
Confidence 99999999999 88999999999999999 7778788888887643
No 188
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.89 E-value=1.6e-08 Score=74.74 Aligned_cols=84 Identities=10% Similarity=-0.033 Sum_probs=71.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc--HHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATA 79 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~ 79 (281)
+..++..|..++..|+|++|+..|.+++..+|++..+++.+|.+|..+|++++|+..|++++.++|.. ..+...+...
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~ 98 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVF 98 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999998753 3444445555
Q ss_pred HHHhhc
Q 023518 80 CMKLEE 85 (281)
Q Consensus 80 ~~~~g~ 85 (281)
+..+++
T Consensus 99 l~~l~~ 104 (115)
T 2kat_A 99 LRRLAR 104 (115)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 544443
No 189
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.89 E-value=2.4e-08 Score=74.75 Aligned_cols=80 Identities=14% Similarity=0.043 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA 79 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 79 (281)
..++..|..++..|+|++|+..|.+++..+|++ +.+++.+|.++..+|++++|+..+++++...|++..+...+..+
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l 119 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERL 119 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHH
Confidence 467889999999999999999999999999999 89999999999999999999999999999999987776655544
Q ss_pred HHH
Q 023518 80 CMK 82 (281)
Q Consensus 80 ~~~ 82 (281)
...
T Consensus 120 ~~l 122 (129)
T 2xev_A 120 QSI 122 (129)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 190
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.88 E-value=1.8e-09 Score=97.00 Aligned_cols=98 Identities=14% Similarity=0.209 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------HH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA------ELFADRAQASIKLQNFTEAVADANRAIELEPSM------SK 71 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~------~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~~ 71 (281)
.+...|..++..|+|++|+.+|.++++..+... .++..+|.+|..+|++++|+..+++++.+.+.. ..
T Consensus 225 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 304 (411)
T 4a1s_A 225 ACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQ 304 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 566778888888888888888888888755432 377888888888888888888888888776633 66
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhhhcCC
Q 023518 72 AYWRKATACMKLEEYETAKVALEKGASLAP 101 (281)
Q Consensus 72 a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p 101 (281)
+++.+|.+|..+|++++|..+|++++.+.+
T Consensus 305 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 334 (411)
T 4a1s_A 305 SCYSLGNTYTLLHEFNTAIEYHNRHLAIAQ 334 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 778888888888888888888888877644
No 191
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.88 E-value=4.8e-08 Score=87.27 Aligned_cols=111 Identities=7% Similarity=0.022 Sum_probs=99.7
Q ss_pred HHHHHHhcC-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh-h-
Q 023518 9 AKEAFIDDY-FELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATACMKL-E- 84 (281)
Q Consensus 9 g~~~~~~~~-y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~-g- 84 (281)
-.+....+. .++|+.+++++|..+|++..+|..|+.++..++ .+++++..++.++..+|++..+|..++.++..+ +
T Consensus 60 ~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~ 139 (349)
T 3q7a_A 60 FRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQ 139 (349)
T ss_dssp HHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCC
Confidence 334444444 479999999999999999999999999999999 599999999999999999999999999999999 8
Q ss_pred cHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 85 EYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 85 ~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
++++++.++.++++.+|.|..++...+.+-..++.
T Consensus 140 ~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~ 174 (349)
T 3q7a_A 140 DPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFST 174 (349)
T ss_dssp CCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcc
Confidence 99999999999999999999998888877766654
No 192
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.87 E-value=2.7e-08 Score=88.89 Aligned_cols=115 Identities=5% Similarity=-0.113 Sum_probs=106.7
Q ss_pred hHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc-c-CHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDD-YFELAYDLYSQAIEISPNSAELFADRAQASIKL-Q-NFTEAVADANRAIELEPSMSKAYWRKATA 79 (281)
Q Consensus 3 ~~l~~~g~~~~~~~-~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l-~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 79 (281)
..+..++..+...+ ++++++..++++|..+|.+..+|..|+.++..+ + ++++++..+++++.++|.+..+|..++.+
T Consensus 89 taWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wv 168 (349)
T 3q7a_A 89 TVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWL 168 (349)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 45778899999888 599999999999999999999999999999998 8 99999999999999999999999999999
Q ss_pred HHHhhcHH--------HHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023518 80 CMKLEEYE--------TAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 80 ~~~~g~~~--------~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l 117 (281)
+..+|.++ +++.++.++++.+|.|..++.....+-..+
T Consensus 169 l~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l 214 (349)
T 3q7a_A 169 YSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSR 214 (349)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTS
T ss_pred HHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 99999998 999999999999999999988887775443
No 193
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.86 E-value=2.5e-08 Score=93.33 Aligned_cols=116 Identities=16% Similarity=0.143 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----CC---
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EP--- 67 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~-----~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-----~p--- 67 (281)
.+...+..+..+|+|++|+.+|.++|.. .+++ ...+.++|.+|..+|+|++|+..+++++.+ ++
T Consensus 311 ~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 390 (490)
T 3n71_A 311 DTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNA 390 (490)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 4556777788999999999999999987 4444 567899999999999999999999999975 33
Q ss_pred CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhh-----cCCCChhHH---HHHHHHHHHHHh
Q 023518 68 SMSKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFT---NLIKECEERIAE 119 (281)
Q Consensus 68 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~-----~~p~~~~~~---~~l~~~~~~l~~ 119 (281)
+-+..+.++|.+|..+|+|++|...|++|+. +.|+++... ..+..++..++.
T Consensus 391 ~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~ 450 (490)
T 3n71_A 391 QLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRM 450 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHH
Confidence 4577899999999999999999999999987 467777654 455555544443
No 194
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.85 E-value=3.8e-09 Score=90.96 Aligned_cols=118 Identities=14% Similarity=0.131 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------H
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~ 70 (281)
..+...|..++..|+|++|+..|.+++...+.. ..++..+|.++..+|++++|+..+++++.+.+.. .
T Consensus 184 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 263 (338)
T 3ro2_A 184 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEA 263 (338)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 356778999999999999999999999875432 3488999999999999999999999999887654 7
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh------hHHHHHHHHHHHHHhh
Q 023518 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGDS------RFTNLIKECEERIAEE 120 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~------~~~~~l~~~~~~l~~~ 120 (281)
.+++.+|.++..+|++++|..+|++++.+.+... .....++.+...+++.
T Consensus 264 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 319 (338)
T 3ro2_A 264 QSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNH 319 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCh
Confidence 7889999999999999999999999998755332 2444555555555443
No 195
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.82 E-value=4.9e-08 Score=71.66 Aligned_cols=76 Identities=16% Similarity=0.130 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEIS-------PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYW 74 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~-------p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~ 74 (281)
+++.+..|..++..++|..|+..|.+|++.. .....++.++|.|+.++|+++.|+..+++++.++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 3566677777777777777777777777652 223455566666666666666666666666666666555544
Q ss_pred HHH
Q 023518 75 RKA 77 (281)
Q Consensus 75 ~~g 77 (281)
+++
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 444
No 196
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.81 E-value=2.4e-08 Score=92.03 Aligned_cols=109 Identities=11% Similarity=0.142 Sum_probs=88.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----C---CC
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----E---PS 68 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~-----~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-----~---p~ 68 (281)
.+..+......|+|++|+.+|.++|.. .|++ ...+.++|.+|..+|+|++|+..+++++.+ + |+
T Consensus 301 ~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~ 380 (433)
T 3qww_A 301 VIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN 380 (433)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH
T ss_pred HHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH
Confidence 344455555678999999999999986 4555 467889999999999999999999999975 3 44
Q ss_pred cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc-----CCCChhHHHHHHHH
Q 023518 69 MSKAYWRKATACMKLEEYETAKVALEKGASL-----APGDSRFTNLIKEC 113 (281)
Q Consensus 69 ~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~-----~p~~~~~~~~l~~~ 113 (281)
-+..+.++|.+|..+|+|++|...|++|+.+ .|+++........+
T Consensus 381 ~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l 430 (433)
T 3qww_A 381 VASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEI 430 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 5778999999999999999999999999874 67887666544433
No 197
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.80 E-value=1.5e-08 Score=81.70 Aligned_cols=116 Identities=9% Similarity=0.116 Sum_probs=92.0
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc---CCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC------c
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI---SPNS----AELFADRAQASIKLQNFTEAVADANRAIELEPS------M 69 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~---~p~~----~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~------~ 69 (281)
..+...|..++..|+|++|+..|.+++.. .+++ ..++.++|.++..+|++++|+..+++++.+.+. .
T Consensus 67 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 146 (203)
T 3gw4_A 67 RALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAI 146 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHH
Confidence 45778899999999999999999999998 4433 567899999999999999999999999976431 2
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
..++..+|.++..+|++++|..++++++++...... ..+...+...+..
T Consensus 147 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~~~~ 195 (203)
T 3gw4_A 147 ACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELED-SEAVNELMTRLNG 195 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC-HHHHHHHHhcccc
Confidence 446789999999999999999999999987543322 2344444444444
No 198
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.80 E-value=1.4e-08 Score=75.37 Aligned_cols=85 Identities=15% Similarity=0.171 Sum_probs=75.0
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC-------hhHH
Q 023518 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD-------SRFT 107 (281)
Q Consensus 35 ~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~-------~~~~ 107 (281)
.+..++.+|.++...|++++|+..+.+++.++|.+..+++.+|.+++.+|++++|..+|++++...|.+ ..+.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 457789999999999999999999999999999999999999999999999999999999999998876 5556
Q ss_pred HHHHHHHHHHHh
Q 023518 108 NLIKECEERIAE 119 (281)
Q Consensus 108 ~~l~~~~~~l~~ 119 (281)
..++.+...+++
T Consensus 83 ~~la~~~~~~~~ 94 (131)
T 1elr_A 83 ARIGNSYFKEEK 94 (131)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHhcc
Confidence 666666655444
No 199
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.80 E-value=1.7e-08 Score=87.54 Aligned_cols=115 Identities=10% Similarity=0.016 Sum_probs=98.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc--HHHHHHHHHHHHH
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATACMK 82 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~ 82 (281)
....|..+...|+|++|.+.|..++...|.+. .++.+|.++++.++|.+|+..++.++...... ..+++.+|.++..
T Consensus 105 ~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~ 183 (282)
T 4f3v_A 105 TMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN 183 (282)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH
Confidence 34578889999999999999999999999888 99999999999999999999999887764222 4589999999999
Q ss_pred hhcHHHHHHHHHHhhhcC--CC-ChhHHHHHHHHHHHHHhh
Q 023518 83 LEEYETAKVALEKGASLA--PG-DSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~--p~-~~~~~~~l~~~~~~l~~~ 120 (281)
+|++++|+.+|+++.... |. .......++.|...+++.
T Consensus 184 LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~ 224 (282)
T 4f3v_A 184 LALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNE 224 (282)
T ss_dssp TTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCH
T ss_pred CCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCH
Confidence 999999999999998644 44 445677778787777776
No 200
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.79 E-value=9.9e-08 Score=70.00 Aligned_cols=86 Identities=15% Similarity=0.060 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC-------CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHH
Q 023518 35 SAELFADRAQASIKLQNFTEAVADANRAIELE-------PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (281)
Q Consensus 35 ~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~-------p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~ 107 (281)
++.-++.+|..++..++|..|+.+++.|++.. .....++..+|.+++++|+++.|+..++++++++|++..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 35668899999999999999999999999863 45688999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHhh
Q 023518 108 NLIKECEERIAEE 120 (281)
Q Consensus 108 ~~l~~~~~~l~~~ 120 (281)
..+...+..+...
T Consensus 84 ~n~~~~~~~~~~~ 96 (104)
T 2v5f_A 84 GNLKYFEYIMAKE 96 (104)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhc
Confidence 7777666655543
No 201
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.77 E-value=4.9e-08 Score=91.54 Aligned_cols=114 Identities=10% Similarity=-0.023 Sum_probs=90.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH-
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA-ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC- 80 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~-~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~- 80 (281)
..+...|..+...|++++|...|.+++...|.++ .+|..++.++.+.|++++|+..|++|++..|.....++..+...
T Consensus 322 ~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~ 401 (530)
T 2ooe_A 322 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 401 (530)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 3466778888888999999999999999888885 58888888888888888888888888888887777776666553
Q ss_pred HHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023518 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 116 (281)
...|++++|..+|+++++.+|++..++..+..+...
T Consensus 402 ~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~ 437 (530)
T 2ooe_A 402 YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 437 (530)
T ss_dssp HHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHh
Confidence 357888888888888888888887776666655443
No 202
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.77 E-value=1.3e-07 Score=71.69 Aligned_cols=107 Identities=9% Similarity=0.035 Sum_probs=93.8
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHH---HHHHHHHHHHcC-C-CcHHHHHHHHHHHHHhhcHH
Q 023518 13 FIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTE---AVADANRAIELE-P-SMSKAYWRKATACMKLEEYE 87 (281)
Q Consensus 13 ~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~---A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~g~~~ 87 (281)
........+.+.|.+.+..++.+....+++|.++.+..+-.. ++..++..++.+ | ..-+++|.+|++++++|+|.
T Consensus 12 ~~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~ 91 (126)
T 1nzn_A 12 VSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYE 91 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHH
Confidence 344556777888888888888899999999999999887666 999999998887 5 57889999999999999999
Q ss_pred HHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 88 TAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 88 ~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
+|+.+++.+++.+|+|.++......+..++.+
T Consensus 92 ~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~k 123 (126)
T 1nzn_A 92 KALKYVRGLLQTEPQNNQAKELERLIDKAMKK 123 (126)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998888887765
No 203
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.75 E-value=1.5e-07 Score=88.20 Aligned_cols=106 Identities=13% Similarity=0.082 Sum_probs=94.6
Q ss_pred hHHHHHHHHHHH-------hcCHH-------HHHHHHHHHHh-cCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC
Q 023518 3 TDLEKKAKEAFI-------DDYFE-------LAYDLYSQAIE-ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP 67 (281)
Q Consensus 3 ~~l~~~g~~~~~-------~~~y~-------~Al~~y~~al~-~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p 67 (281)
+.++..|..+.. .|+++ +|+..|.+++. ..|++..+|..+|..+..+|++++|...|++++.+.|
T Consensus 273 ~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p 352 (530)
T 2ooe_A 273 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIED 352 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccc
Confidence 456677777775 68877 99999999998 7999999999999999999999999999999999999
Q ss_pred CcH-HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHH
Q 023518 68 SMS-KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (281)
Q Consensus 68 ~~~-~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~ 108 (281)
.+. .+|..+|..+.+.|++++|+..|+++++..|.+.....
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~ 394 (530)
T 2ooe_A 353 IDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYV 394 (530)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHH
T ss_pred cCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHH
Confidence 885 69999999999999999999999999999887655443
No 204
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.75 E-value=1.1e-07 Score=87.64 Aligned_cols=109 Identities=17% Similarity=0.111 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----C---C
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----E---P 67 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~-----~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-----~---p 67 (281)
.+......+..+|+|++|+..|.+++.. .+++ ...+.++|.+|..+|+|++|+..+++++.+ + |
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp 368 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHP 368 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCCh
Confidence 4455667788899999999999999976 3445 567899999999999999999999999965 3 3
Q ss_pred CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc-----CCCChhHHHHHHH
Q 023518 68 SMSKAYWRKATACMKLEEYETAKVALEKGASL-----APGDSRFTNLIKE 112 (281)
Q Consensus 68 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~-----~p~~~~~~~~l~~ 112 (281)
.-+..++++|.+|..+|+|++|...|++|+.+ .|+++.....+..
T Consensus 369 ~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~ 418 (429)
T 3qwp_A 369 VRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILL 418 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 45778999999999999999999999999874 7788766554333
No 205
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.65 E-value=3.3e-07 Score=70.64 Aligned_cols=89 Identities=13% Similarity=0.019 Sum_probs=78.3
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-
Q 023518 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWRKATACMK- 82 (281)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~----l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~- 82 (281)
.|..++..+.+++|+.+|.++.+. .++.+++++|.+|.. .+++.+|+.+|++|.+. .++.+++.+|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G 106 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAG 106 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCC
Confidence 677777778888899999999887 578899999999998 78999999999999887 578899999999999
Q ss_pred ---hhcHHHHHHHHHHhhhcC
Q 023518 83 ---LEEYETAKVALEKGASLA 100 (281)
Q Consensus 83 ---~g~~~~A~~~~~~a~~~~ 100 (281)
.+++++|..+|+++.+..
T Consensus 107 ~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 107 KGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp SSSCCCHHHHHHHHHHHHHTT
T ss_pred CCCCcCHHHHHHHHHHHHHCC
Confidence 899999999999998874
No 206
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.64 E-value=6.4e-07 Score=80.21 Aligned_cols=101 Identities=20% Similarity=0.138 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH--------------------------------
Q 023518 3 TDLEKKAKEAFIDD---YFELAYDLYSQAIEISPNSAELFADRAQASI-------------------------------- 47 (281)
Q Consensus 3 ~~l~~~g~~~~~~~---~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~-------------------------------- 47 (281)
-+++.+|..++..+ ++.+|+.+|++|++++|+++.++..++.||.
T Consensus 197 ydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~ 276 (372)
T 3ly7_A 197 LTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNL 276 (372)
T ss_dssp HHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcC
Confidence 46677888887654 4689999999999999999877776555552
Q ss_pred ------------HccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh
Q 023518 48 ------------KLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 48 ------------~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~ 104 (281)
..|++++|+..+++|+.++|. ..+|..+|.++...|++++|.+.|.+|++++|..+
T Consensus 277 a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 277 SIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 247788888888888888864 56777788888888888888888888888888765
No 207
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.60 E-value=2.3e-07 Score=82.43 Aligned_cols=98 Identities=9% Similarity=0.047 Sum_probs=57.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcC--------CCcH
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELE--------PSMS 70 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~--------p~~~ 70 (281)
+...|..++..|+|++|+..|.+++...+.. ...+.++|.++...|++++|+..+++++.+. |...
T Consensus 56 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~ 135 (373)
T 1hz4_A 56 TSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHE 135 (373)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHH
Confidence 3455566666666666666666666553322 1234556666666666666666666666543 2234
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCC
Q 023518 71 KAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~ 102 (281)
.++..+|.+++.+|++++|..++++++.+.+.
T Consensus 136 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 136 FLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 45555666666666666666666666665543
No 208
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.55 E-value=5.2e-07 Score=83.66 Aligned_cols=106 Identities=11% Similarity=-0.010 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCCCcHHHHHHH
Q 023518 4 DLEKKAKEAFIDD---YFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWRK 76 (281)
Q Consensus 4 ~l~~~g~~~~~~~---~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~----l~~~~~A~~~~~~al~l~p~~~~a~~~~ 76 (281)
.++..|..++..| ++++|+++|.++++. .++.+++++|.+|.. .+++++|+.+|+++++.+ ++.+++.+
T Consensus 330 a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~L 405 (490)
T 2xm6_A 330 AQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQL 405 (490)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHH
Confidence 4556677776644 778888888888776 467788888888887 778888888888887764 57788888
Q ss_pred HHHHHH----hhcHHHHHHHHHHhhhcCCC---ChhHHHHHHHH
Q 023518 77 ATACMK----LEEYETAKVALEKGASLAPG---DSRFTNLIKEC 113 (281)
Q Consensus 77 g~~~~~----~g~~~~A~~~~~~a~~~~p~---~~~~~~~l~~~ 113 (281)
|.+|.. .+++++|..+|+++++.+|+ +.....++..+
T Consensus 406 g~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~l~~~ 449 (490)
T 2xm6_A 406 GEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKKL 449 (490)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHTTS
T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHHHHHHHhc
Confidence 888887 78888888888888888743 55555554443
No 209
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.53 E-value=6e-07 Score=79.68 Aligned_cols=97 Identities=20% Similarity=0.226 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-----cH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEIS--------PNSAELFADRAQASIKLQNFTEAVADANRAIELEPS-----MS 70 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~--------p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~-----~~ 70 (281)
.+...|..++..|+|++|+..|.+++... |....++.++|.++..+|++++|+..+++++.+.+. ..
T Consensus 95 ~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 174 (373)
T 1hz4_A 95 SLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQL 174 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHH
Confidence 35678999999999999999999999874 334567888999999999999999999999998764 35
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcC
Q 023518 71 KAYWRKATACMKLEEYETAKVALEKGASLA 100 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~ 100 (281)
.++..+|.++...|++++|..++++++.+.
T Consensus 175 ~~~~~la~~~~~~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 175 QCLAMLIQCSLARGDLDNARSQLNRLENLL 204 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 688899999999999999999999998874
No 210
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.50 E-value=3e-06 Score=78.46 Aligned_cols=106 Identities=10% Similarity=-0.021 Sum_probs=66.9
Q ss_pred hHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCCCcHHHHH
Q 023518 3 TDLEKKAKEAFI----DDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYW 74 (281)
Q Consensus 3 ~~l~~~g~~~~~----~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~----l~~~~~A~~~~~~al~l~p~~~~a~~ 74 (281)
+.++..|..++. .+++++|+.+|.++++. .++.+++.+|.+|.. .+++++|+.+|+++... .+..+++
T Consensus 40 ~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~ 115 (490)
T 2xm6_A 40 KAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--GLPQAQQ 115 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHH
Confidence 345566666666 66777777777777665 456667777777766 66777777777776654 3556666
Q ss_pred HHHHHHHH----hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023518 75 RKATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 75 ~~g~~~~~----~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 114 (281)
.+|.+|.. .+++++|+.+|+++...+ +......++.+.
T Consensus 116 ~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~--~~~a~~~Lg~~y 157 (490)
T 2xm6_A 116 NLGVMYHEGNGVKVDKAESVKWFRLAAEQG--RDSGQQSMGDAY 157 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHH
Confidence 67766666 566777777776665542 344444444443
No 211
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.49 E-value=1.5e-06 Score=80.26 Aligned_cols=106 Identities=12% Similarity=0.009 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc----cCHHHHHHHHHHHHHcCCCcHHHHHHH
Q 023518 4 DLEKKAKEAFIDD---YFELAYDLYSQAIEISPNSAELFADRAQASIKL----QNFTEAVADANRAIELEPSMSKAYWRK 76 (281)
Q Consensus 4 ~l~~~g~~~~~~~---~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l----~~~~~A~~~~~~al~l~p~~~~a~~~~ 76 (281)
.++..|..+...| ++++|+..|.++.+..+.++..++++|.+|... +++++|+.+|+++. |.++.+++.+
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~L 254 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSL 254 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHH
Confidence 3455666666666 777777777777777777666666677766554 56667777766666 5666666666
Q ss_pred HHH-H--HHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023518 77 ATA-C--MKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 77 g~~-~--~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 114 (281)
|.+ + ...+++++|..+|+++.+.. +......++.+.
T Consensus 255 g~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y 293 (452)
T 3e4b_A 255 AQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLY 293 (452)
T ss_dssp HHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHH
Confidence 666 3 34566666666666666443 444455555444
No 212
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.47 E-value=8.2e-07 Score=63.89 Aligned_cols=68 Identities=19% Similarity=0.146 Sum_probs=63.1
Q ss_pred hhHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc
Q 023518 2 ATDLEKKAKEAFIDDY---FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM 69 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~---y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~ 69 (281)
++.+...|.+++..++ .++|..++.+++..+|+++.+++.+|..++..|+|.+|+..+++++..+|..
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 4678889999986666 7999999999999999999999999999999999999999999999999874
No 213
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.47 E-value=3.5e-07 Score=85.51 Aligned_cols=99 Identities=11% Similarity=0.014 Sum_probs=84.9
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----CCC
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~-----~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-----~p~ 68 (281)
+..+.+.|..|...|+|++|+.+|.++|.. .+++ +..+.++|.+|..+|+|++|+..+++|+.+ +|+
T Consensus 351 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~ 430 (490)
T 3n71_A 351 LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPS 430 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 456788999999999999999999999987 4444 567999999999999999999999999974 455
Q ss_pred c---HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcC
Q 023518 69 M---SKAYWRKATACMKLEEYETAKVALEKGASLA 100 (281)
Q Consensus 69 ~---~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~ 100 (281)
. .+..-.++.++..++.|.+|...|+++.+..
T Consensus 431 Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 431 HPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 5566789999999999999999998886543
No 214
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.39 E-value=3.3e-06 Score=64.91 Aligned_cols=93 Identities=14% Similarity=0.036 Sum_probs=81.0
Q ss_pred hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH----hhcHHHHH
Q 023518 15 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK----LEEYETAK 90 (281)
Q Consensus 15 ~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~g~~~~A~ 90 (281)
.+|+++|+.+|.++.+.....+ . +|.+|...+.+++|+.+|+++... .++.+++.+|.+|.. .+++++|.
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~~a--~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEMFG--C--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTH--H--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCHhh--h--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 4689999999999999874444 4 999999999999999999999987 678999999999999 89999999
Q ss_pred HHHHHhhhcCCCChhHHHHHHHHHH
Q 023518 91 VALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 91 ~~~~~a~~~~p~~~~~~~~l~~~~~ 115 (281)
.+|+++.+. ++......+..+..
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~y~ 104 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYKQY 104 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHH
Confidence 999999987 56777777777654
No 215
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.39 E-value=1.8e-06 Score=74.57 Aligned_cols=87 Identities=11% Similarity=0.085 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHc-----cCHHHHHHHHHHHHHcCCCc-HHHHHHHHHHHHH-hhcHH
Q 023518 17 YFELAYDLYSQAIEISPN--SAELFADRAQASIKL-----QNFTEAVADANRAIELEPSM-SKAYWRKATACMK-LEEYE 87 (281)
Q Consensus 17 ~y~~Al~~y~~al~~~p~--~~~~~~~~a~~~~~l-----~~~~~A~~~~~~al~l~p~~-~~a~~~~g~~~~~-~g~~~ 87 (281)
....|...+.++++++|+ +..+|..+|..|.++ |+.++|...|++|++++|+. ..+++.+|..+.. .|+++
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 457899999999999999 678999999999996 99999999999999999975 9999999999988 49999
Q ss_pred HHHHHHHHhhhcCCCC
Q 023518 88 TAKVALEKGASLAPGD 103 (281)
Q Consensus 88 ~A~~~~~~a~~~~p~~ 103 (281)
.|..++++++..+|..
T Consensus 258 ~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 258 GFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHcCCCCC
Confidence 9999999999998874
No 216
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.39 E-value=2.6e-06 Score=78.55 Aligned_cols=99 Identities=11% Similarity=0.025 Sum_probs=51.6
Q ss_pred HHHHHHHHHh----cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH---HHccCHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 023518 6 EKKAKEAFID----DYFELAYDLYSQAIEISPNSAELFADRAQAS---IKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (281)
Q Consensus 6 ~~~g~~~~~~----~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~---~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 78 (281)
+..|..+... +++++|+.+|.++. |.++.+++++|.+| ...+++++|+.+|++++..+ ++.+++.+|.
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~ 291 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGK 291 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHH
Confidence 3444444333 45555555555555 45555555555552 23455555555555555433 4555555555
Q ss_pred HHHHhh-----cHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023518 79 ACMKLE-----EYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 79 ~~~~~g-----~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 113 (281)
+|. .| ++++|+.+|+++. +++......++.+
T Consensus 292 ~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~ 327 (452)
T 3e4b_A 292 LYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQI 327 (452)
T ss_dssp HHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHH
T ss_pred HHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHH
Confidence 555 33 5555555555555 4444444444444
No 217
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.39 E-value=4.1e-06 Score=73.46 Aligned_cols=99 Identities=10% Similarity=-0.009 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC------cHHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISP--NSAELFADRAQASIKLQNFTEAVADANRAIELEPS------MSKAYWR 75 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p--~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~------~~~a~~~ 75 (281)
.++..|..++..|++++|++.+.+++..+| .+.+++..++.+++++|+.+.|...+++..+.+|+ ....++.
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~La 181 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLA 181 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHH
Confidence 356789999999999999999999999987 78999999999999999999999999999999993 3334444
Q ss_pred HHHHHHHhh--cHHHHHHHHHHhhhcCCC
Q 023518 76 KATACMKLE--EYETAKVALEKGASLAPG 102 (281)
Q Consensus 76 ~g~~~~~~g--~~~~A~~~~~~a~~~~p~ 102 (281)
-|.+.+..| ++.+|...|+++....|+
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 455577777 999999999999888876
No 218
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.37 E-value=8.8e-06 Score=61.85 Aligned_cols=101 Identities=16% Similarity=0.091 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccC---HHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHHhhcHHHHHHHHH
Q 023518 19 ELAYDLYSQAIEISPNSAELFADRAQASIKLQN---FTEAVADANRAIELEP-SMSKAYWRKATACMKLEEYETAKVALE 94 (281)
Q Consensus 19 ~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~---~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~~g~~~~A~~~~~ 94 (281)
....+.|.+-+ ...-++...++.|.|+++..+ ..+++..++..++.+| ..-+++|.+|++++++|+|.+|+.+.+
T Consensus 24 ~~l~~qy~~E~-~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d 102 (134)
T 3o48_A 24 EILRQQVVSEG-GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVD 102 (134)
T ss_dssp HHHHHHHHHTT-GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 33444454433 233357889999999999865 5678999999999888 458899999999999999999999999
Q ss_pred HhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 95 KGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 95 ~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.+++.+|+|.++......++.++.+.
T Consensus 103 ~lL~~eP~N~QA~~Lk~~Ie~ki~kd 128 (134)
T 3o48_A 103 TLFEHERNNKQVGALKSMVEDKIQKE 128 (134)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhCCCCHHHHHHHHHHHHHHHhh
Confidence 99999999999999999998888754
No 219
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.36 E-value=2.1e-06 Score=67.32 Aligned_cols=77 Identities=10% Similarity=0.028 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHHhc---CHHHHHHHHHHHHhcC-C-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDD---YFELAYDLYSQAIEIS-P-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKA 77 (281)
Q Consensus 3 ~~l~~~g~~~~~~~---~y~~Al~~y~~al~~~-p-~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g 77 (281)
+..|+.|.++.+.+ ++++++.++..+++.+ | ++.++++++|..|+++++|.+|+.+++++++++|++..+...+-
T Consensus 33 ~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~ 112 (152)
T 1pc2_A 33 STQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 112 (152)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 56788999999988 8889999999999998 6 56899999999999999999999999999999999988776554
Q ss_pred HH
Q 023518 78 TA 79 (281)
Q Consensus 78 ~~ 79 (281)
.+
T Consensus 113 ~i 114 (152)
T 1pc2_A 113 LI 114 (152)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 220
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.31 E-value=2.8e-05 Score=59.84 Aligned_cols=88 Identities=17% Similarity=0.134 Sum_probs=79.1
Q ss_pred CCCHHHHHHHHHHHHHccC---HHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHH
Q 023518 33 PNSAELFADRAQASIKLQN---FTEAVADANRAIELEP-SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (281)
Q Consensus 33 p~~~~~~~~~a~~~~~l~~---~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~ 108 (281)
.-+....+++|.|+.+..+ ..+++..++..++..| ..-+++|.+|++++++|+|.+|+.+.+.+++.+|+|.++..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 4568899999999999865 5678999999999888 46789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 023518 109 LIKECEERIAEE 120 (281)
Q Consensus 109 ~l~~~~~~l~~~ 120 (281)
....+..++.+.
T Consensus 116 Lk~~Ie~~i~kd 127 (144)
T 1y8m_A 116 LKSMVEDKIQKE 127 (144)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999998888765
No 221
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.25 E-value=6.2e-06 Score=60.04 Aligned_cols=79 Identities=18% Similarity=0.164 Sum_probs=67.3
Q ss_pred CCcccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCC-----C----------ceeeeccccccccccCcceEE
Q 023518 174 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E----------EAYHFQPRLFGKIIPAKCRYE 238 (281)
Q Consensus 174 ~r~~w~Qt~~~V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~-----~----------~~~~~~~~L~~~I~~~~s~~~ 238 (281)
++++|+++++.+.|.+-+.|+.++++.|.+.++.|.|+..... + ..|.-.+.|...|+++..+.+
T Consensus 5 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~ 84 (100)
T 3gla_A 5 PRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAA 84 (100)
T ss_dssp CCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEE
T ss_pred CcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEEE
Confidence 3789999999999999999999999999999999999854321 1 136667789999999999999
Q ss_pred EeCcEEEEEEeecC
Q 023518 239 VLSTKVEIRLAKAE 252 (281)
Q Consensus 239 v~~~kiei~L~K~~ 252 (281)
+.++.++|+|.|.+
T Consensus 85 ~~~GvL~I~~pK~~ 98 (100)
T 3gla_A 85 GRNGVLEIRIPKRP 98 (100)
T ss_dssp EETTEEEEEEEBC-
T ss_pred EeCCEEEEEEecCC
Confidence 99999999999975
No 222
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.22 E-value=8.1e-06 Score=83.78 Aligned_cols=107 Identities=13% Similarity=0.150 Sum_probs=88.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC---------------
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP--------------- 67 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p--------------- 67 (281)
..+...|..++..|+|++|+.+|.++ ..|..+|.||.++|+|++|++.+++|.....
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~ 1267 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFR 1267 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHH
Confidence 35778999999999999999999996 4899999999999999999999999855433
Q ss_pred ----------CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023518 68 ----------SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 68 ----------~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l 117 (281)
.+++.+..++..|..+|.|++|+..|+.++.+++.+..+...++.+..+.
T Consensus 1268 LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy 1327 (1630)
T 1xi4_A 1268 LAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 1327 (1630)
T ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhC
Confidence 12334556677788899999999999999999998888776676665543
No 223
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.21 E-value=3.9e-06 Score=77.01 Aligned_cols=105 Identities=13% Similarity=0.155 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC---------------
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS--------------- 68 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~--------------- 68 (281)
.+...|..++..|+|++|..+|.++ ..|..+|.|+.++|+|++|++.+.++. ++.
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef 193 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEF 193 (449)
T ss_dssp -------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcH
Confidence 5667788888888888888888865 367778888888888888888888772 221
Q ss_pred ------------cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023518 69 ------------MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 69 ------------~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~ 118 (281)
+++-...+...|...|++++|+..|+.++.+++.+......++.+..+.+
T Consensus 194 ~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~ 255 (449)
T 1b89_A 194 RLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 255 (449)
T ss_dssp HHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcC
Confidence 11112234467888899999999999999999999888888887766443
No 224
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.19 E-value=9.4e-06 Score=73.11 Aligned_cols=98 Identities=12% Similarity=0.097 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC----------------------------------------------HH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----------------------------------------------AE 37 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~----------------------------------------------~~ 37 (281)
.+...|..|+..|+|++|+++|.+++...+.. ..
T Consensus 57 al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 57 SILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 35667777777777777777777666542111 34
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHc------CCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCC
Q 023518 38 LFADRAQASIKLQNFTEAVADANRAIEL------EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (281)
Q Consensus 38 ~~~~~a~~~~~l~~~~~A~~~~~~al~l------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p 101 (281)
++.++|.+|..+|+|.+|+..+..++.. .+....++...|.+|..+|+|.+|..++++++...+
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 137 LSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 5677888888889999999888888765 233467888889999999999999999988887643
No 225
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.16 E-value=1.2e-05 Score=70.56 Aligned_cols=99 Identities=8% Similarity=-0.018 Sum_probs=82.6
Q ss_pred HHHHHHhc--CHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHc----------CCCcHHHHH
Q 023518 9 AKEAFIDD--YFELAYDLYSQAIEISPN--SAELFADRAQASIKLQNFTEAVADANRAIEL----------EPSMSKAYW 74 (281)
Q Consensus 9 g~~~~~~~--~y~~Al~~y~~al~~~p~--~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l----------~p~~~~a~~ 74 (281)
|...+..| +|++|...|+++.+..|+ ....+++ |++++|+|++|...++.++++ +|+++.++.
T Consensus 183 a~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~La 259 (310)
T 3mv2_B 183 SYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLA 259 (310)
T ss_dssp HHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHH
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHH
Confidence 33355555 999999999999988887 3445555 999999999999999988876 588999999
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHH
Q 023518 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 112 (281)
++..+.+.+|+ +|.++++++.+.+|+++-+.....+
T Consensus 260 N~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~~~k 295 (310)
T 3mv2_B 260 NQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHHQEI 295 (310)
T ss_dssp HHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHHHHH
Confidence 99999999998 8999999999999999976554443
No 226
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.16 E-value=1.6e-05 Score=58.04 Aligned_cols=80 Identities=16% Similarity=0.198 Sum_probs=68.5
Q ss_pred CCcccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCCCc----------eeeeccccccccccCcceEEEeCcE
Q 023518 174 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEE----------AYHFQPRLFGKIIPAKCRYEVLSTK 243 (281)
Q Consensus 174 ~r~~w~Qt~~~V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~~~----------~~~~~~~L~~~I~~~~s~~~v~~~k 243 (281)
+.++|+++++.+.|.+-+.|+.+++++|.+.++.|.|+-....+. .|.-.+.|...|+++..+.++.++.
T Consensus 7 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~Gv 86 (102)
T 4fei_A 7 PAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAGGV 86 (102)
T ss_dssp CCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEETTE
T ss_pred CcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEECCE
Confidence 378999999999999999999999999999999999975432111 3566778999999999999999999
Q ss_pred EEEEEeecCC
Q 023518 244 VEIRLAKAEP 253 (281)
Q Consensus 244 iei~L~K~~~ 253 (281)
++|+|.|+++
T Consensus 87 L~I~lpK~~~ 96 (102)
T 4fei_A 87 LTVRFEKLRP 96 (102)
T ss_dssp EEEEEEBSSC
T ss_pred EEEEEEccCc
Confidence 9999999864
No 227
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.13 E-value=2.3e-06 Score=64.98 Aligned_cols=81 Identities=16% Similarity=0.321 Sum_probs=70.1
Q ss_pred CcccccCCCeEEEEEEecCCC--CcceEEEEeeeEEEEEEEcCCCceeeecccccccc-ccCcc--eEEEeCcEEEEEEe
Q 023518 175 RHEFYQKPEEVVVTVFAKGIP--AKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKI-IPAKC--RYEVLSTKVEIRLA 249 (281)
Q Consensus 175 r~~w~Qt~~~V~i~v~~k~~~--~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I-~~~~s--~~~v~~~kiei~L~ 249 (281)
|+.=.|++++|+|.|.+..++ .+++.+.++++-|.++.+ .|.|.+.|-|+| +.+.+ +|......+.|+|.
T Consensus 5 ~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~-----PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLp 79 (134)
T 2k8q_A 5 RFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRLRFPHELIDDERSTAQYDSKDECINVKVA 79 (134)
T ss_dssp EEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS-----SSCEEECCSSCEECCSSCEEEEETTTTEEEEEEE
T ss_pred eEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC-----CeEEEecCCCeeecCCCcceeEeccCCEEEEEEe
Confidence 677789999999999999998 889999999999999875 799999999999 55443 66666679999999
Q ss_pred ecCC-CCCCccc
Q 023518 250 KAEP-IQWSSLE 260 (281)
Q Consensus 250 K~~~-~~W~~l~ 260 (281)
|..+ +.|+.|.
T Consensus 80 K~~~Ge~F~dLD 91 (134)
T 2k8q_A 80 KLNKNEYFEDLD 91 (134)
T ss_dssp ESSTTCCCSSTT
T ss_pred CCCCCCCCCCcc
Confidence 9987 7899984
No 228
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.11 E-value=1.3e-05 Score=63.28 Aligned_cols=109 Identities=15% Similarity=0.141 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC-------
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------AELFADRAQASIKLQNFTEAVADANRAIELEP------- 67 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p------- 67 (281)
.++++...++..+.|+.|+-+++.++....++ ...++.+|.+++..++|..|...|++||.+..
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 36889999999999999999999977664332 34789999999999999999999999986431
Q ss_pred ------------------CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023518 68 ------------------SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 68 ------------------~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 113 (281)
.+.+..|+.+.||..+|++++|+..++...... ..+.+...++++
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k~-Rt~kvnm~LakL 164 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSRQ-RTPKINMLLANL 164 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGGG-CCHHHHHHHHHH
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCchh-cCHHHHHHHHHH
Confidence 123688999999999999999999987643222 233344444443
No 229
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.05 E-value=2.5e-05 Score=80.21 Aligned_cols=79 Identities=15% Similarity=0.113 Sum_probs=65.2
Q ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023518 34 NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 34 ~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 113 (281)
+++.+|+++|.++...|++++|+..|.+| ++...|++.|.++.++|+|++|+++|+.+.+..+. +.+..+++.+
T Consensus 1103 n~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e-~~Idt~Lafa 1176 (1630)
T 1xi4_A 1103 NEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE-SYVETELIFA 1176 (1630)
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc-ccccHHHHHH
Confidence 55788999999999999999999999886 88899999999999999999999999999988843 3233345555
Q ss_pred HHHHH
Q 023518 114 EERIA 118 (281)
Q Consensus 114 ~~~l~ 118 (281)
..+++
T Consensus 1177 YAKl~ 1181 (1630)
T 1xi4_A 1177 LAKTN 1181 (1630)
T ss_pred HHhhc
Confidence 55443
No 230
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.03 E-value=2.6e-05 Score=58.96 Aligned_cols=80 Identities=13% Similarity=0.039 Sum_probs=68.9
Q ss_pred CCcccccCCCeEEEEEEecCCCCcceEEEEee-eEEEEEEEcCCC--c---------eeeeccccccccccCcc-eEEEe
Q 023518 174 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGE-QILSVSIDVPGE--E---------AYHFQPRLFGKIIPAKC-RYEVL 240 (281)
Q Consensus 174 ~r~~w~Qt~~~V~i~v~~k~~~~~~~~v~~~~-~~l~~~~~~~~~--~---------~~~~~~~L~~~I~~~~s-~~~v~ 240 (281)
+.++|+++++.+.|.+-+.|+.+++++|.+.+ +.|.|+...... . .|.-.+.|...|+++.. +.+..
T Consensus 25 P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~~ 104 (123)
T 3aab_A 25 PPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYE 104 (123)
T ss_dssp SCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEEEE
T ss_pred CcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeEEc
Confidence 37899999999999999999999999999999 999999764321 1 45666789999999998 88999
Q ss_pred CcEEEEEEeecCC
Q 023518 241 STKVEIRLAKAEP 253 (281)
Q Consensus 241 ~~kiei~L~K~~~ 253 (281)
++.+.|+|.|.+.
T Consensus 105 ~GvL~I~lPK~~~ 117 (123)
T 3aab_A 105 NGVLTIRIPIAGT 117 (123)
T ss_dssp TTEEEEEEEGGGE
T ss_pred CCEEEEEEEcCCC
Confidence 9999999999754
No 231
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.98 E-value=3.6e-05 Score=56.47 Aligned_cols=81 Identities=17% Similarity=0.347 Sum_probs=69.8
Q ss_pred CcccccCCCeEEEEEEecCCC--CcceEEEEeeeEEEEEEEcCCCceeeeccccccccccCc---ceEEEeCcEEEEEEe
Q 023518 175 RHEFYQKPEEVVVTVFAKGIP--AKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAK---CRYEVLSTKVEIRLA 249 (281)
Q Consensus 175 r~~w~Qt~~~V~i~v~~k~~~--~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~~~~---s~~~v~~~kiei~L~ 249 (281)
++.=.|+++.|+|.|.+..+. ..++.+.++++-+.+... +|-|.+.|-++|..++ ++|.+....+.|+|.
T Consensus 19 ~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~-----PYyLRL~lP~~vved~~~~A~YD~d~g~~~v~lp 93 (115)
T 3eud_A 19 RFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRLRFPHELIDDERSTAQYDSKDECINVKVA 93 (115)
T ss_dssp CEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET-----TEEEEEECSSCEECSTTCEEEEETTTTEEEEEEE
T ss_pred cEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC-----CeEEEEecCcceecCCCcceEEeCCCcEEEEEEc
Confidence 788899999999999999877 679999999999999985 7999999999996543 378888889999999
Q ss_pred ecCC-CCCCccc
Q 023518 250 KAEP-IQWSSLE 260 (281)
Q Consensus 250 K~~~-~~W~~l~ 260 (281)
|..+ +..+.|.
T Consensus 94 K~~~GE~F~dLD 105 (115)
T 3eud_A 94 KLNKNEYFEDLD 105 (115)
T ss_dssp ESSTTCCCCCTT
T ss_pred CCcCCCcCCCcc
Confidence 9987 6777764
No 232
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.98 E-value=2e-05 Score=70.90 Aligned_cols=97 Identities=13% Similarity=0.081 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-------c
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI------SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS-------M 69 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~-------~ 69 (281)
......|..++..|+|.+|+..+.+++.. .+....++...|.+|..+|+|.+|...+++++.+.+. .
T Consensus 136 ~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 215 (434)
T 4b4t_Q 136 SLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTV 215 (434)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHH
Confidence 34567899999999999999999999876 2333688999999999999999999999999976432 2
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023518 70 SKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~ 99 (281)
+..+...|..+...|+|.+|..+|.++++.
T Consensus 216 ~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 216 AELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 456778899999999999999999999874
No 233
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.88 E-value=6.5e-05 Score=54.70 Aligned_cols=79 Identities=16% Similarity=0.151 Sum_probs=66.4
Q ss_pred CcccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcC---CC-----ceeeeccccccccccCcceEEE-eCcEEE
Q 023518 175 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVE 245 (281)
Q Consensus 175 r~~w~Qt~~~V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~---~~-----~~~~~~~~L~~~I~~~~s~~~v-~~~kie 245 (281)
-.+|+++++.+.|.+-+.|+.+++++|.+.++.|.|+-... ++ .+|.-.+.|...|+++..+.++ .++.+.
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~ 82 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLS 82 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEE
Confidence 36899999999999999999999999999999999985432 11 1355677899999999999999 688999
Q ss_pred EEEeecCC
Q 023518 246 IRLAKAEP 253 (281)
Q Consensus 246 i~L~K~~~ 253 (281)
|+|.|.+.
T Consensus 83 I~lPK~~~ 90 (101)
T 2wj5_A 83 IQATPASA 90 (101)
T ss_dssp EEECBCCC
T ss_pred EEEECCCc
Confidence 99999753
No 234
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.85 E-value=7.6e-05 Score=58.49 Aligned_cols=80 Identities=19% Similarity=0.233 Sum_probs=67.4
Q ss_pred CCcccccCCCeEEEEEEecCCCCcceEEEEe-eeEEEEEEEcCC-----C----------ceeeeccccccccccCcceE
Q 023518 174 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFG-EQILSVSIDVPG-----E----------EAYHFQPRLFGKIIPAKCRY 237 (281)
Q Consensus 174 ~r~~w~Qt~~~V~i~v~~k~~~~~~~~v~~~-~~~l~~~~~~~~-----~----------~~~~~~~~L~~~I~~~~s~~ 237 (281)
++++|+++++.+.|.+-+.|+.+++++|.+. .+.|.|+..... + ..|.-.+.|-..|+++..+.
T Consensus 44 p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A 123 (151)
T 1gme_A 44 ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKA 123 (151)
T ss_dssp GCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEE
Confidence 4799999999999999999999999999995 579999864321 1 13556778999999999899
Q ss_pred EEeCcEEEEEEeecCC
Q 023518 238 EVLSTKVEIRLAKAEP 253 (281)
Q Consensus 238 ~v~~~kiei~L~K~~~ 253 (281)
+..++.++|+|.|.+.
T Consensus 124 ~~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 124 GLENGVLTVTVPKAEV 139 (151)
T ss_dssp EEETTEEEEEEECCCC
T ss_pred EEECCEEEEEEEccCc
Confidence 9999999999999764
No 235
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=97.78 E-value=0.00012 Score=57.95 Aligned_cols=78 Identities=12% Similarity=0.145 Sum_probs=67.2
Q ss_pred cccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCC-----C-----------ceeeeccccccccccCcceEEE
Q 023518 176 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E-----------EAYHFQPRLFGKIIPAKCRYEV 239 (281)
Q Consensus 176 ~~w~Qt~~~V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~-----~-----------~~~~~~~~L~~~I~~~~s~~~v 239 (281)
++++++++.+.|.+-+.|+.+++++|.+.++.|.|+..... + ..|.-.+.|-..|+++..+.+.
T Consensus 59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~ 138 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF 138 (161)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE
T ss_pred eeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE
Confidence 89999999999999999999999999999999999864322 1 1455667899999999999999
Q ss_pred eCcEEEEEEeecCC
Q 023518 240 LSTKVEIRLAKAEP 253 (281)
Q Consensus 240 ~~~kiei~L~K~~~ 253 (281)
.++.++|+|.|++.
T Consensus 139 ~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 139 ENGVLSVILPKAES 152 (161)
T ss_dssp ETTEEEEEEEBCGG
T ss_pred ECCEEEEEEEcCCC
Confidence 99999999999764
No 236
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.78 E-value=0.0003 Score=60.80 Aligned_cols=81 Identities=15% Similarity=0.065 Sum_probs=65.3
Q ss_pred CCCCHHHHHHHHHHHHH---c--------cCHHHHHHHHHHHHHcCCC--cHHHHHHHHHHHHHh-----hcHHHHHHHH
Q 023518 32 SPNSAELFADRAQASIK---L--------QNFTEAVADANRAIELEPS--MSKAYWRKATACMKL-----EEYETAKVAL 93 (281)
Q Consensus 32 ~p~~~~~~~~~a~~~~~---l--------~~~~~A~~~~~~al~l~p~--~~~a~~~~g~~~~~~-----g~~~~A~~~~ 93 (281)
+|+++.+++-.|..... . +....|...+++|++++|+ ++.+|..+|..|... |+.++|..+|
T Consensus 148 ~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~f 227 (301)
T 3u64_A 148 TRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAF 227 (301)
T ss_dssp CGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHH
Confidence 55667777777666644 1 3467899999999999999 678999999999996 9999999999
Q ss_pred HHhhhcCCCC-hhHHHHHHH
Q 023518 94 EKGASLAPGD-SRFTNLIKE 112 (281)
Q Consensus 94 ~~a~~~~p~~-~~~~~~l~~ 112 (281)
++|++++|+. .......+.
T Consensus 228 erAL~LnP~~~id~~v~YA~ 247 (301)
T 3u64_A 228 EHLTRYCSAHDPDHHITYAD 247 (301)
T ss_dssp HHHHHHCCTTCSHHHHHHHH
T ss_pred HHHHHhCCCCCchHHHHHHH
Confidence 9999999975 655554444
No 237
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.67 E-value=9e-05 Score=68.02 Aligned_cols=81 Identities=10% Similarity=0.003 Sum_probs=64.3
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----CCC
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~-----~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-----~p~ 68 (281)
+..+.+.|..|...|+|++|+.+|.++|.. .+++ +..+.++|.+|..+|+|++|+..+++|+.+ +|+
T Consensus 329 ~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~ 408 (429)
T 3qwp_A 329 LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGRE 408 (429)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 456788899999999999999999999976 3444 567999999999999999999999999974 565
Q ss_pred cHH---HHHHHHHHHHH
Q 023518 69 MSK---AYWRKATACMK 82 (281)
Q Consensus 69 ~~~---a~~~~g~~~~~ 82 (281)
.+. .+..++.+...
T Consensus 409 Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 409 HSLIEDLILLLEECDAN 425 (429)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHH
Confidence 543 33444444443
No 238
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.67 E-value=0.00021 Score=53.96 Aligned_cols=77 Identities=12% Similarity=0.052 Sum_probs=65.6
Q ss_pred hHHHHHHHHHHHhcCHHH---HHHHHHHHHhcC-C-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFEL---AYDLYSQAIEIS-P-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKA 77 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~---Al~~y~~al~~~-p-~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g 77 (281)
+..|+.|.++...++-.+ +|.++...++.+ | ..-++++.+|..++++|+|.+|+..++.+|+..|++..+.-.+.
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 456788888888776666 999999999986 4 56789999999999999999999999999999999988776554
Q ss_pred HH
Q 023518 78 TA 79 (281)
Q Consensus 78 ~~ 79 (281)
.+
T Consensus 116 ~i 117 (126)
T 1nzn_A 116 LI 117 (126)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 239
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.63 E-value=7.3e-05 Score=68.69 Aligned_cols=70 Identities=13% Similarity=0.065 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----CCC
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~-----~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-----~p~ 68 (281)
+..+.+.|..|...|+|++|+.+|.++|.. .+++ +..+.++|.+|..+|+|++|+..+++|+.+ +|+
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~ 419 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKD 419 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCC
Confidence 456788999999999999999999999987 4444 567999999999999999999999999974 566
Q ss_pred cHH
Q 023518 69 MSK 71 (281)
Q Consensus 69 ~~~ 71 (281)
.+.
T Consensus 420 Hp~ 422 (433)
T 3qww_A 420 HPY 422 (433)
T ss_dssp CHH
T ss_pred ChH
Confidence 543
No 240
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.58 E-value=0.00028 Score=51.79 Aligned_cols=78 Identities=13% Similarity=0.163 Sum_probs=65.7
Q ss_pred cccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcC---CC-----ceeeeccccccccccCcceEEE-eCcEEEE
Q 023518 176 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEI 246 (281)
Q Consensus 176 ~~w~Qt~~~V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~---~~-----~~~~~~~~L~~~I~~~~s~~~v-~~~kiei 246 (281)
-+++.+++.+.|.+-+.|+.+++++|.+.++.|.|+-... ++ ..|.-.+.|...|+++.-+.++ .++.+.|
T Consensus 5 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I 84 (106)
T 3l1e_A 5 SEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTF 84 (106)
T ss_dssp EEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEE
T ss_pred eEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEE
Confidence 4688999999999999999999999999999999985321 11 1356667899999999999999 6889999
Q ss_pred EEeecCC
Q 023518 247 RLAKAEP 253 (281)
Q Consensus 247 ~L~K~~~ 253 (281)
+|.|.+.
T Consensus 85 ~~PK~~~ 91 (106)
T 3l1e_A 85 SGPKIPS 91 (106)
T ss_dssp EEEBCCC
T ss_pred EEEccCc
Confidence 9999764
No 241
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.50 E-value=0.00071 Score=60.49 Aligned_cols=67 Identities=16% Similarity=0.098 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHH
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKA 72 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a 72 (281)
+...|..++..|++++|+..+++|+.++| +..+|..+|.++...|++++|++.|.+|++++|.....
T Consensus 280 ~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~ 346 (372)
T 3ly7_A 280 YQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTL 346 (372)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChH
Confidence 44456677778999999999999999996 47788999999999999999999999999999988543
No 242
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.49 E-value=0.00089 Score=46.95 Aligned_cols=73 Identities=7% Similarity=0.096 Sum_probs=61.8
Q ss_pred ccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCC-----C---ceeeeccccccccccCcceEEEe-CcEEEEEEe
Q 023518 179 YQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E---EAYHFQPRLFGKIIPAKCRYEVL-STKVEIRLA 249 (281)
Q Consensus 179 ~Qt~~~V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~-----~---~~~~~~~~L~~~I~~~~s~~~v~-~~kiei~L~ 249 (281)
+++++.+.|.+-+.|+.+++++|.+..+.|.|+-.... | ..|.=.+.|...|+++.-+.++. ++.+.|+|-
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lP 82 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP 82 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEE
Confidence 57889999999999999999999999999999864321 1 24666778999999999999998 889999998
Q ss_pred ec
Q 023518 250 KA 251 (281)
Q Consensus 250 K~ 251 (281)
|.
T Consensus 83 K~ 84 (85)
T 3q9p_A 83 MP 84 (85)
T ss_dssp CC
T ss_pred cC
Confidence 85
No 243
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.44 E-value=0.0012 Score=50.02 Aligned_cols=80 Identities=13% Similarity=-0.029 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDD---YFELAYDLYSQAIEISPN-SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (281)
Q Consensus 3 ~~l~~~g~~~~~~~---~y~~Al~~y~~al~~~p~-~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 78 (281)
+..|+.|.++...+ +...++.++...++.+|. .-+.++.+|..++++|+|.+|+.+.+.+++..|++..+.-....
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 45677888888765 456899999999998884 47899999999999999999999999999999999887766555
Q ss_pred HHHH
Q 023518 79 ACMK 82 (281)
Q Consensus 79 ~~~~ 82 (281)
+--+
T Consensus 121 Ie~k 124 (134)
T 3o48_A 121 VEDK 124 (134)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 244
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.43 E-value=0.0016 Score=50.00 Aligned_cols=77 Identities=12% Similarity=-0.019 Sum_probs=65.2
Q ss_pred hHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 023518 3 TDLEKKAKEAFIDDY---FELAYDLYSQAIEISPN-SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~---y~~Al~~y~~al~~~p~-~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 78 (281)
+..|+.|.++....+ -.+++.++...++.+|. .-+.++.+|..++++|+|.+|+.+++.+|+..|++..+.-....
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 456788888887664 46799999999998884 57899999999999999999999999999999999777665544
Q ss_pred H
Q 023518 79 A 79 (281)
Q Consensus 79 ~ 79 (281)
+
T Consensus 120 I 120 (144)
T 1y8m_A 120 V 120 (144)
T ss_dssp H
T ss_pred H
Confidence 3
No 245
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.42 E-value=0.0012 Score=64.13 Aligned_cols=60 Identities=13% Similarity=-0.056 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhcCHHHHH-HHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 023518 5 LEKKAKEAFIDDYFELAY-DLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE 64 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al-~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~ 64 (281)
|+..|..+...|+.++|. ..|.+|+...|.+..+++..+......|+++.|...|++++.
T Consensus 346 W~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~ 406 (679)
T 4e6h_A 346 WFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCID 406 (679)
T ss_dssp HHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 444444445555555554 555555555555555555555555555555555555555554
No 246
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.37 E-value=0.00061 Score=62.47 Aligned_cols=114 Identities=12% Similarity=0.029 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCC---------------------------CCHHHHHHHHHHHHHccCHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISP---------------------------NSAELFADRAQASIKLQNFTEAV 56 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p---------------------------~~~~~~~~~a~~~~~l~~~~~A~ 56 (281)
.+...|.++++.|+|++|++.|.++. ++ .+++-...+..+|.+.|++++|+
T Consensus 150 n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai 227 (449)
T 1b89_A 150 NFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELI 227 (449)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHH
Confidence 46678999999999999999999983 22 11222333457899999999999
Q ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHH--hhcHHHHHHHHHHhhhcCC-----CChhHHHHHHHHHHHHHh
Q 023518 57 ADANRAIELEPSMSKAYWRKATACMK--LEEYETAKVALEKGASLAP-----GDSRFTNLIKECEERIAE 119 (281)
Q Consensus 57 ~~~~~al~l~p~~~~a~~~~g~~~~~--~g~~~~A~~~~~~a~~~~p-----~~~~~~~~l~~~~~~l~~ 119 (281)
..++.++.+++.....+..+|++|.+ .++..++++.|...+.+.+ .+..+|..+.-+....++
T Consensus 228 ~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~~e 297 (449)
T 1b89_A 228 TMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEE 297 (449)
T ss_dssp HHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHTTC
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhch
Confidence 99999999999999999999887764 6788888888887777766 666666666666544443
No 247
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=97.35 E-value=0.00049 Score=48.83 Aligned_cols=74 Identities=11% Similarity=0.143 Sum_probs=58.2
Q ss_pred cCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcC---CCc-----eeeeccccccccccCcceEEE-eCcEEEEEEee
Q 023518 180 QKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GEE-----AYHFQPRLFGKIIPAKCRYEV-LSTKVEIRLAK 250 (281)
Q Consensus 180 Qt~~~V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~---~~~-----~~~~~~~L~~~I~~~~s~~~v-~~~kiei~L~K 250 (281)
.+++.+.|.+-+.|+.++++.|.+.++.|.|+.... ++. .|.-.+.|...|+++..+.++ .++.+.|+|.|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK 82 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGPR 82 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEECB
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEc
Confidence 467889999999999999999999999999886421 111 366677899999999989999 78899999999
Q ss_pred cCC
Q 023518 251 AEP 253 (281)
Q Consensus 251 ~~~ 253 (281)
.+.
T Consensus 83 ~~~ 85 (90)
T 2y1y_A 83 KQV 85 (90)
T ss_dssp C--
T ss_pred CCC
Confidence 753
No 248
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.34 E-value=0.0043 Score=48.13 Aligned_cols=103 Identities=17% Similarity=-0.002 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHHhcCH------HHHHHHHHHHHhcCCCC--------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC
Q 023518 3 TDLEKKAKEAFIDDYF------ELAYDLYSQAIEISPNS--------AELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y------~~Al~~y~~al~~~p~~--------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~ 68 (281)
+.++.....+.+.|+. +.-++.|.+|+..-|-. .-+|++.|.. ..+++.++|.+.|+.++.++..
T Consensus 14 d~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKk 92 (161)
T 4h7y_A 14 EDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKK 92 (161)
T ss_dssp HHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHH
Confidence 4566667777777888 88889999999987654 4566777755 5679999999999999999888
Q ss_pred cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhH
Q 023518 69 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 106 (281)
Q Consensus 69 ~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~ 106 (281)
+++.|...|.--.++|+..+|+..+.+|+.+.|...+.
T Consensus 93 FAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 93 FAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 99999999999999999999999999999999876643
No 249
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.32 E-value=0.0013 Score=63.72 Aligned_cols=98 Identities=5% Similarity=-0.003 Sum_probs=79.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEI-SPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~-~p~~~~~~~~~a~~~~~l~~-~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
+...++...+.++.+.|..+|.+|++. .+....+|...|....+.++ ++.|...|+++++..|++...|...+.....
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~ 516 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIY 516 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHh
Confidence 455556666778889999999999887 44456677777777767654 8999999999999999998888888888888
Q ss_pred hhcHHHHHHHHHHhhhcCCC
Q 023518 83 LEEYETAKVALEKGASLAPG 102 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~~~p~ 102 (281)
.|+.+.|+..|++++...|.
T Consensus 517 ~~~~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 517 VNEESQVKSLFESSIDKISD 536 (679)
T ss_dssp HTCHHHHHHHHHHHTTTSSS
T ss_pred CCCHHHHHHHHHHHHHhcCC
Confidence 89999999999999998873
No 250
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.30 E-value=0.004 Score=56.14 Aligned_cols=95 Identities=16% Similarity=0.045 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC----------------------HHHHHHHHHHHHHccCHHHHHHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----------------------AELFADRAQASIKLQNFTEAVADANR 61 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~----------------------~~~~~~~a~~~~~l~~~~~A~~~~~~ 61 (281)
.+...|......++.+.|+..+.+|+.+.... ..+...++.+++.+|++.+|+..+..
T Consensus 117 ~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~ 196 (388)
T 2ff4_A 117 AEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEA 196 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 44556677777899999999999999984321 12345577788889999999999999
Q ss_pred HHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023518 62 AIELEPSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 62 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
++..+|-+-.+|..+-.+|+..|+..+|+..|+++.+
T Consensus 197 ~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 197 LTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988765
No 251
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=97.20 E-value=0.00083 Score=53.80 Aligned_cols=78 Identities=12% Similarity=0.148 Sum_probs=62.3
Q ss_pred cccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcC---CCc-----eeeeccccccccccCcceEEE-eCcEEEE
Q 023518 176 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GEE-----AYHFQPRLFGKIIPAKCRYEV-LSTKVEI 246 (281)
Q Consensus 176 ~~w~Qt~~~V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~---~~~-----~~~~~~~L~~~I~~~~s~~~v-~~~kiei 246 (281)
.+++++++.+.|.+-+.|+.+++++|++.++.|.|+-... ++. +|.-.+.|-..|+++.-+.++ .++.++|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I 145 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTV 145 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEE
Confidence 5899999999999999999999999999999999885422 111 255667899999999999999 5889999
Q ss_pred EEeecCC
Q 023518 247 RLAKAEP 253 (281)
Q Consensus 247 ~L~K~~~ 253 (281)
+|.|++.
T Consensus 146 ~lPK~~~ 152 (175)
T 2klr_A 146 NGPRKQV 152 (175)
T ss_dssp EEECC--
T ss_pred EEECCCC
Confidence 9999754
No 252
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.90 E-value=0.0041 Score=49.03 Aligned_cols=77 Identities=18% Similarity=0.091 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcC---CC----------------------CHHHHHHHHHHHHHccCHHHHHH
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEIS---PN----------------------SAELFADRAQASIKLQNFTEAVA 57 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~---p~----------------------~~~~~~~~a~~~~~l~~~~~A~~ 57 (281)
+.+...|+.+|..++|..|+..|+++|.+. +. +.++.+..|.||.+++++.+|+.
T Consensus 64 ~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~ 143 (167)
T 3ffl_A 64 QLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIA 143 (167)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHH
Confidence 467889999999999999999999997761 11 13688999999999999999998
Q ss_pred HHHHHHHcCCCcHHHHHHHHHHH
Q 023518 58 DANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 58 ~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
.++..= .....++....+|..|
T Consensus 144 ~Le~Ip-~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 144 ILDGIP-SRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHTSC-GGGCCHHHHHHHHHHC
T ss_pred HHhcCC-chhcCHHHHHHHHHHh
Confidence 765421 2223456666666654
No 253
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=96.77 E-value=0.0054 Score=53.60 Aligned_cols=80 Identities=15% Similarity=0.128 Sum_probs=68.3
Q ss_pred CCcccccCCC----eEEEEEEecCCCCcceEEEEeeeEEEEEEEcCC----C---ceeeeccccccccccCcceEEEe-C
Q 023518 174 YRHEFYQKPE----EVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG----E---EAYHFQPRLFGKIIPAKCRYEVL-S 241 (281)
Q Consensus 174 ~r~~w~Qt~~----~V~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~----~---~~~~~~~~L~~~I~~~~s~~~v~-~ 241 (281)
+..+.+.+++ .+.|++-+.|+.+++++|++..+.|.|+-.... + ..|.=.+.|...|+++..+.++. +
T Consensus 99 p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~n 178 (314)
T 2bol_A 99 FLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATITTD 178 (314)
T ss_dssp GGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEECSS
T ss_pred CccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEeCC
Confidence 3678899999 899999999999999999999999999864321 1 24777778999999999999999 8
Q ss_pred cEEEEEEeecCC
Q 023518 242 TKVEIRLAKAEP 253 (281)
Q Consensus 242 ~kiei~L~K~~~ 253 (281)
+.+.|+|.|.++
T Consensus 179 GVL~I~lPK~~~ 190 (314)
T 2bol_A 179 DVLVIEAPVNEP 190 (314)
T ss_dssp SEEEEEEEBSSC
T ss_pred CEEEEEEeccCc
Confidence 899999999765
No 254
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.76 E-value=0.0034 Score=61.26 Aligned_cols=61 Identities=21% Similarity=0.287 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhh
Q 023518 37 ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGA 97 (281)
Q Consensus 37 ~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~ 97 (281)
.++...+..++..|+|+-|+..+++|+...|.....|+.++.+|..+|+|+.|+-.+..+.
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 4566677778888999999999999999999999999999999999999999999998875
No 255
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.67 E-value=0.036 Score=51.47 Aligned_cols=101 Identities=11% Similarity=-0.117 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHH---------------------------------------
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQ--------------------------------------- 44 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~--------------------------------------- 44 (281)
-++..+..+...|+.+.|...|.+|+.. |.+..+++..+.
T Consensus 215 lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~ 293 (493)
T 2uy1_A 215 VYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHL 293 (493)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHH
Confidence 3555666667777788888888888877 776444333322
Q ss_pred -HHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhh-cHHHHHHHHHHhhhcCCCChhH
Q 023518 45 -ASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE-EYETAKVALEKGASLAPGDSRF 106 (281)
Q Consensus 45 -~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g-~~~~A~~~~~~a~~~~p~~~~~ 106 (281)
...+.+..+.|...|.+| ...+.....|...|...+..+ +++.|...|+.+++..|+++.+
T Consensus 294 ~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~ 356 (493)
T 2uy1_A 294 NYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLL 356 (493)
T ss_dssp HHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHH
Confidence 222345666777777777 322234456666666666666 4777888888887777766654
No 256
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.20 E-value=0.094 Score=48.60 Aligned_cols=91 Identities=9% Similarity=-0.029 Sum_probs=75.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
+...+....+.++.+.|..+|.+| ...+.....|...|.....++ +++.|...|+.+++..|+.+..+...+......
T Consensus 289 w~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~ 367 (493)
T 2uy1_A 289 RINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRI 367 (493)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc
Confidence 444555566778899999999999 443345677888888777777 599999999999999999888888888888899
Q ss_pred hcHHHHHHHHHHh
Q 023518 84 EEYETAKVALEKG 96 (281)
Q Consensus 84 g~~~~A~~~~~~a 96 (281)
|+.+.|...|+++
T Consensus 368 ~~~~~aR~l~er~ 380 (493)
T 2uy1_A 368 GDEENARALFKRL 380 (493)
T ss_dssp TCHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHH
Confidence 9999999999997
No 257
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.95 E-value=0.12 Score=43.96 Aligned_cols=63 Identities=24% Similarity=0.233 Sum_probs=58.7
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHH
Q 023518 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSK 71 (281)
Q Consensus 9 g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~ 71 (281)
...+++.++.++|+......++.+|.|+.....+-..+.-.|+++.|...++.+.+++|....
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 456789999999999999999999999999999999999999999999999999999998743
No 258
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.92 E-value=0.02 Score=55.83 Aligned_cols=57 Identities=21% Similarity=0.271 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHH
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANR 61 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~ 61 (281)
+..++..+...|+|+-|+.+..+|+...|.++..|+.+|.||+.+|+|+.|+-.++.
T Consensus 340 L~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNS 396 (754)
T 4gns_B 340 LNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINS 396 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhc
Confidence 455788889999999999999999999999999999999999999999999865444
No 259
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.75 E-value=0.097 Score=47.16 Aligned_cols=93 Identities=13% Similarity=0.013 Sum_probs=75.5
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCC--CC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHcC----CC---cHHHH
Q 023518 7 KKAKEAFIDDYFELAYDLYSQAIEISP--NS----AELFADRAQASIKLQNFTEAVADANRAIELE----PS---MSKAY 73 (281)
Q Consensus 7 ~~g~~~~~~~~y~~Al~~y~~al~~~p--~~----~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~----p~---~~~a~ 73 (281)
..|..++..|+|.+|+..+.+.++.-. ++ .+.+......|..++++..+...+.+|.... ++ .+...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 678999999999999999999888521 12 5678889999999999999999998887543 21 24566
Q ss_pred HHHHHHHH-HhhcHHHHHHHHHHhhhc
Q 023518 74 WRKATACM-KLEEYETAKVALEKGASL 99 (281)
Q Consensus 74 ~~~g~~~~-~~g~~~~A~~~~~~a~~~ 99 (281)
..-|..+. ..++|..|..+|-.+++-
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 66789999 899999999999998753
No 260
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.63 E-value=0.061 Score=49.00 Aligned_cols=98 Identities=5% Similarity=-0.056 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCC---CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC--Cc----HHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISP---NSAELFADRAQASIKLQNFTEAVADANRAIELEP--SM----SKAYW 74 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p---~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p--~~----~~a~~ 74 (281)
.+...|.-++..|+++.|++.|.++..... +-.+.++....+++..+++..+...+.++..+.. .+ .....
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 456789999999999999999999987632 2368888999999999999999999999876532 11 33455
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCC
Q 023518 75 RKATACMKLEEYETAKVALEKGASLAP 101 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~~~p 101 (281)
..|.++...++|.+|...|..++.-..
T Consensus 213 ~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 213 YYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 678888889999999999988876543
No 261
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.57 E-value=0.36 Score=38.28 Aligned_cols=91 Identities=9% Similarity=-0.013 Sum_probs=70.6
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH--c--C-------------CCcH
Q 023518 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE--L--E-------------PSMS 70 (281)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~--l--~-------------p~~~ 70 (281)
.+..+|-.|+|..|+-++.. -+.....+..+.||.++++|..|+..++..+. . + |.+-
T Consensus 39 ~~I~LyyngEY~R~Lf~L~~-----lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~Dk 113 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFHLHK-----LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDE 113 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHHT-----CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCH
T ss_pred hhhhhhhcchHhHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchH
Confidence 46677788888888776643 35577788899999999999999999999983 2 2 2333
Q ss_pred H-HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC
Q 023518 71 K-AYWRKATACMKLEEYETAKVALEKGASLAPGD 103 (281)
Q Consensus 71 ~-a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~ 103 (281)
+ .+..+|..+.+.|+-++|+.+|......++--
T Consensus 114 EfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf 147 (242)
T 3kae_A 114 EFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLF 147 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHHHhcCHHHhhhHhhhhcCCcccc
Confidence 3 34457999999999999999999988887643
No 262
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.26 E-value=0.38 Score=44.60 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=80.2
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHH
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEIS-PNSAELFADRAQASIKLQNFTEAVADANRAIELEP-SMSKAYWRKATACMK 82 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~-p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~ 82 (281)
+...-..+.+.|++++|+++|.+..+.. .-+...|..+-.+|.+.|++++|+..++...+.+- -+...|..+-.+|.+
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~ 187 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMD 187 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhh
Confidence 3344567889999999999999987752 22466778888899999999999999999887652 245677778889999
Q ss_pred hhcHHHHHHHHHHhhh--cCCCChhH
Q 023518 83 LEEYETAKVALEKGAS--LAPGDSRF 106 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~--~~p~~~~~ 106 (281)
.|++++|...|++..+ ..|+...+
T Consensus 188 ~g~~d~A~~ll~~Mr~~g~~ps~~T~ 213 (501)
T 4g26_A 188 TKNADKVYKTLQRLRDLVRQVSKSTF 213 (501)
T ss_dssp TTCHHHHHHHHHHHHHHTSSBCHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcCHHHH
Confidence 9999999999998876 45554443
No 263
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.51 E-value=0.29 Score=45.49 Aligned_cols=78 Identities=10% Similarity=0.011 Sum_probs=62.4
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023518 39 FADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 39 ~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 116 (281)
+..+|........+..|..+|.+|+.+.|+++.+|..+|++....|+.-+|..+|.+++-...-.+.+...+..+-..
T Consensus 155 l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 155 LVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 444555555556788999999999999999999999999999999999999999999987665555555555555443
No 264
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.36 E-value=0.17 Score=42.96 Aligned_cols=64 Identities=14% Similarity=0.039 Sum_probs=58.7
Q ss_pred HHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHH
Q 023518 44 QASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (281)
Q Consensus 44 ~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~ 107 (281)
..+++.++.++|+......++.+|.+......+...+.-.|+|+.|..-++.+.+++|......
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a 68 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 68 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHH
Confidence 3466789999999999999999999999999999999999999999999999999999876544
No 265
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.28 E-value=0.26 Score=45.75 Aligned_cols=77 Identities=14% Similarity=0.078 Sum_probs=65.7
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+...|+.+-....+..|..+|.+|+...|++...|..+|..+...|+.-+|+-.|.+++........+.-++...+-
T Consensus 155 l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 155 LVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 46678888888899999999999999999999999999999999999999999999999766555555555555544
No 266
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.12 E-value=0.2 Score=44.89 Aligned_cols=60 Identities=12% Similarity=-0.002 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE 64 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~ 64 (281)
+...+..+...|++.+|+..+..++..+|-+-.++..+..+|...|+..+|+..|+++.+
T Consensus 174 ~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 174 HTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345677788999999999999999999999999999999999999999999999988654
No 267
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.70 E-value=0.88 Score=41.47 Aligned_cols=94 Identities=11% Similarity=0.098 Sum_probs=74.3
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcC--CCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHH---cCCCc----HHH
Q 023518 6 EKKAKEAFIDDYFELAYDLYSQAIEIS--PNS----AELFADRAQASIKLQNFTEAVADANRAIE---LEPSM----SKA 72 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~--p~~----~~~~~~~a~~~~~l~~~~~A~~~~~~al~---l~p~~----~~a 72 (281)
...+..++..|+|.+|...+....... ..+ .+++......++..++|..|...++++.. -.+.. ...
T Consensus 141 ~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~ 220 (445)
T 4b4t_P 141 KDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEY 220 (445)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHH
Confidence 457899999999999999999986531 112 57888899999999999999999988642 12222 445
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023518 73 YWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 73 ~~~~g~~~~~~g~~~~A~~~~~~a~~~ 99 (281)
+...|..+.+.++|.+|..+|..++..
T Consensus 221 ~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 221 YNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 666889999999999999999988764
No 268
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=93.66 E-value=0.51 Score=36.54 Aligned_cols=71 Identities=15% Similarity=-0.002 Sum_probs=59.2
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhh
Q 023518 13 FIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE 84 (281)
Q Consensus 13 ~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g 84 (281)
...+|.++|.+.|+.++......+.+|...|..-++.|+...|...+.+|+.++|..... +..+..-.+.|
T Consensus 71 ~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~-le~a~~nl~~~ 141 (161)
T 4h7y_A 71 KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM-LEIALRNLNLQ 141 (161)
T ss_dssp HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH-HHHHHHHHHTT
T ss_pred HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH-HHHHHHhhhcC
Confidence 566899999999999999887889999999999999999999999999999999976433 44444444444
No 269
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=93.04 E-value=1.6 Score=40.42 Aligned_cols=90 Identities=10% Similarity=0.077 Sum_probs=71.0
Q ss_pred cCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHHhhcHHHHHHHH
Q 023518 16 DYFELAYDLYSQAIEIS-PNSAELFADRAQASIKLQNFTEAVADANRAIELEP-SMSKAYWRKATACMKLEEYETAKVAL 93 (281)
Q Consensus 16 ~~y~~Al~~y~~al~~~-p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~~g~~~~A~~~~ 93 (281)
++.+.|.++|.+..... .-|...|..+..+|.+.|++++|+..++.....+- -+...|-.+-.+|.+.|+.++|...|
T Consensus 84 ~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~ 163 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVD 163 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHH
Confidence 45788999999877653 22466788899999999999999999999887642 25567777888899999999999999
Q ss_pred HHhhhc--CCCChh
Q 023518 94 EKGASL--APGDSR 105 (281)
Q Consensus 94 ~~a~~~--~p~~~~ 105 (281)
+...+. .|+...
T Consensus 164 ~~M~~~G~~Pd~~t 177 (501)
T 4g26_A 164 AHMVESEVVPEEPE 177 (501)
T ss_dssp HHHHHTTCCCCHHH
T ss_pred HHHHhcCCCCCHHH
Confidence 988764 454443
No 270
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=92.79 E-value=0.4 Score=41.72 Aligned_cols=71 Identities=10% Similarity=-0.022 Sum_probs=56.7
Q ss_pred CCCeEEEEEEe-cCCCCcceEEEEeeeEEEEEEEcC-CCc----------eeeeccccccccccCcceEEEeCcEEEEEE
Q 023518 181 KPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVP-GEE----------AYHFQPRLFGKIIPAKCRYEVLSTKVEIRL 248 (281)
Q Consensus 181 t~~~V~i~v~~-k~~~~~~~~v~~~~~~l~~~~~~~-~~~----------~~~~~~~L~~~I~~~~s~~~v~~~kiei~L 248 (281)
++..+.|.+.+ .|+.+++++|++..+.|+|+-... ... .|.=.+.|-..|+++.-+.+..++.+.|+|
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~~ 310 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVEA 310 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETTEEEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEEE
Confidence 45578888888 999999999999999999986432 111 255566789999999999999999999999
Q ss_pred eec
Q 023518 249 AKA 251 (281)
Q Consensus 249 ~K~ 251 (281)
-|.
T Consensus 311 Pk~ 313 (314)
T 2bol_A 311 PLF 313 (314)
T ss_dssp EEE
T ss_pred ecC
Confidence 884
No 271
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=92.46 E-value=0.52 Score=48.27 Aligned_cols=92 Identities=10% Similarity=-0.047 Sum_probs=73.2
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcC-----------------------CCCHHHHHHHHHHHHHccCHHHHHHHHHHH
Q 023518 6 EKKAKEAFIDDYFELAYDLYSQAIEIS-----------------------PNSAELFADRAQASIKLQNFTEAVADANRA 62 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~-----------------------p~~~~~~~~~a~~~~~l~~~~~A~~~~~~a 62 (281)
+-+|..++..|+|++|.++|.++-.-- ...+.+|+.....+.+.+.++.+++.+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 678999999999999999998873210 112456777888888899999999999999
Q ss_pred HHcCCC-c----HHHHHHHHHHHHHhhcHHHHHHHHHHhh
Q 023518 63 IELEPS-M----SKAYWRKATACMKLEEYETAKVALEKGA 97 (281)
Q Consensus 63 l~l~p~-~----~~a~~~~g~~~~~~g~~~~A~~~~~~a~ 97 (281)
++..+. + ...|.++-.++..+|+|++|..++...-
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~p 965 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLS 965 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCC
Confidence 987643 2 2367888999999999999998886543
No 272
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=92.22 E-value=1.1 Score=35.46 Aligned_cols=89 Identities=10% Similarity=-0.019 Sum_probs=64.7
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC--------CcHHHH---
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP--------SMSKAY--- 73 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p--------~~~~a~--- 73 (281)
-..+-..+...|+++.|.+..... ++...|..+|...+..|++.-|..+|.++-..+. .+...+
T Consensus 8 ~~~rF~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kl 82 (177)
T 3mkq_B 8 PHIRFDLALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKM 82 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHH
T ss_pred hHHHHHHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHH
Confidence 345667788999999999987764 5678899999999999999999998887543221 121111
Q ss_pred ----------HHHHHHHHHhhcHHHHHHHHHHhhh
Q 023518 74 ----------WRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 74 ----------~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
.....+++.+|++++++..|.+.-+
T Consensus 83 a~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r 117 (177)
T 3mkq_B 83 QNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGS 117 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTC
T ss_pred HHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCC
Confidence 2235667788888888888866543
No 273
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.86 E-value=0.87 Score=43.80 Aligned_cols=84 Identities=21% Similarity=0.131 Sum_probs=53.9
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC--------CCcHHHHHHH----
Q 023518 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELE--------PSMSKAYWRK---- 76 (281)
Q Consensus 9 g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~--------p~~~~a~~~~---- 76 (281)
...+...|++++|++... .-++...|..+|..+++.++++.|+.+|.++-..+ ..+.+.+..+
T Consensus 659 f~~~l~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a 733 (814)
T 3mkq_A 659 FELALKVGQLTLARDLLT-----DESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDA 733 (814)
T ss_dssp HHHHHHHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eehhhhcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHH
Confidence 334455666666666543 23567889999999999999999999998852211 2222222222
Q ss_pred ---------HHHHHHhhcHHHHHHHHHHhh
Q 023518 77 ---------ATACMKLEEYETAKVALEKGA 97 (281)
Q Consensus 77 ---------g~~~~~~g~~~~A~~~~~~a~ 97 (281)
..+++.+|++++|++.|.+.-
T Consensus 734 ~~~~~~~~A~~~~~~~g~~~~a~~~~~~~~ 763 (814)
T 3mkq_A 734 ETTGKFNLAFNAYWIAGDIQGAKDLLIKSQ 763 (814)
T ss_dssp HHTTCHHHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred HHcCchHHHHHHHHHcCCHHHHHHHHHHcC
Confidence 335666788888887776543
No 274
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=89.75 E-value=4.2 Score=32.23 Aligned_cols=88 Identities=16% Similarity=0.052 Sum_probs=65.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
-+.+..+-...++=.+|+.++-+-.=. -|..+++-+.++..++-.|.|..|+-.+ ..-+-..+.|..+.||.
T Consensus 2 ~~~~~~kI~Ks~kY~dYdt~~fLsa~L---~~~~~eY~lL~~I~LyyngEY~R~Lf~L-----~~lNT~Ts~YYk~LCy~ 73 (242)
T 3kae_A 2 DSKLIGKICKSIRYRDYETAIFLAACL---LPCKPEYRMLMSIVLYLNGEYTRALFHL-----HKLNTCTSKYYESLCYK 73 (242)
T ss_dssp -CTHHHHHHHHHHTTCHHHHHHHHHHH---C----CTHHHHHHHHHHTTCHHHHHHHH-----HTCCBHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhcccccHHHHHHHHH---ccCChHHHhhhhhhhhhcchHhHHHHHH-----HhcchHHHHHHHHHHHH
Confidence 345556667778889999987654332 3444567788889999999999886533 23345678888999999
Q ss_pred HhhcHHHHHHHHHHhh
Q 023518 82 KLEEYETAKVALEKGA 97 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~ 97 (281)
.+++|..|+.+++..+
T Consensus 74 klKdYkkA~~~le~il 89 (242)
T 3kae_A 74 KKKDYKKAIKSLESIL 89 (242)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999988
No 275
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=89.32 E-value=1.6 Score=29.97 Aligned_cols=30 Identities=30% Similarity=0.226 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
|..+..+|..+-+.|+|++|+.+|.++++.
T Consensus 19 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 19 ARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 345666777777777887777777777664
No 276
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=88.80 E-value=1.9 Score=29.57 Aligned_cols=29 Identities=28% Similarity=0.213 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
..+..+|..+-+.|+|++|+.+|..+++.
T Consensus 12 i~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 12 RKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 45666677777777777777777776654
No 277
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.66 E-value=4.9 Score=38.49 Aligned_cols=89 Identities=16% Similarity=0.105 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWR 75 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~--------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~ 75 (281)
.|...|..+.+.++++.|+++|.++-+. ...+.+.+..++......|++..|...|.+ .+ +. -.
T Consensus 683 ~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~---~g--~~---~~ 754 (814)
T 3mkq_A 683 KWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWI---AG--DI---QG 754 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHH---HT--CH---HH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHH---cC--CH---HH
Confidence 5678899999999999999999986332 234455556666777777777776655433 11 11 12
Q ss_pred HHHHHHHhhcHHHHHHHHHHhhhcCCCC
Q 023518 76 KATACMKLEEYETAKVALEKGASLAPGD 103 (281)
Q Consensus 76 ~g~~~~~~g~~~~A~~~~~~a~~~~p~~ 103 (281)
.-..|..+++|++|...-+ .+.|..
T Consensus 755 a~~~~~~~~~~~~A~~lA~---~~~~~~ 779 (814)
T 3mkq_A 755 AKDLLIKSQRFSEAAFLGS---TYGLGD 779 (814)
T ss_dssp HHHHHHHTTCHHHHHHHHH---HTTCCH
T ss_pred HHHHHHHcCChHHHHHHHH---HhCCCh
Confidence 3456788999999987654 455554
No 278
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.74 E-value=1.7 Score=40.31 Aligned_cols=69 Identities=14% Similarity=0.042 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC--C---cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh
Q 023518 36 AELFADRAQASIKLQNFTEAVADANRAIELEP--S---MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p--~---~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~ 104 (281)
+.++..+-+.|+..+.|+.|.....++.--.. . ....+|..|.++...++|.+|..+|..|++..|.+.
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 55667777888889999999999998852211 1 255677789999999999999999999999988664
No 279
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=87.69 E-value=11 Score=38.24 Aligned_cols=94 Identities=15% Similarity=0.044 Sum_probs=72.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHh-----cCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC--CCcHHHHHHHH
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIE-----ISPNSAELFADRAQASIKLQNFTEAVADANRAIELE--PSMSKAYWRKA 77 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~-----~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~--p~~~~a~~~~g 77 (281)
+...-+.|.+.|+.++|.++|.+..+ ..| |...|.-+-..|.+.|++++|+..|+.....+ | +...|-.+-
T Consensus 130 ynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~P-DvvTYntLI 207 (1134)
T 3spa_A 130 LLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTP-DLLSYAAAL 207 (1134)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC-cHHHHHHHH
Confidence 44556778999999999999976432 244 46678888899999999999999999988765 4 444555566
Q ss_pred HHHHHhhc-HHHHHHHHHHhhhcC
Q 023518 78 TACMKLEE-YETAKVALEKGASLA 100 (281)
Q Consensus 78 ~~~~~~g~-~~~A~~~~~~a~~~~ 100 (281)
.++.+.|+ .++|...|++..+..
T Consensus 208 ~glcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 208 QCMGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHHHhCCCcHHHHHHHHHHHHHcC
Confidence 67778887 578889998887754
No 280
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=87.19 E-value=5 Score=31.65 Aligned_cols=85 Identities=13% Similarity=0.035 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHH--HHH------
Q 023518 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSK--AYW------ 74 (281)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~--a~~------ 74 (281)
..|...|..+...|+++-|.++|.++-+. . .+...|.-.|+-+.-....+.|...+-.+.. .++
T Consensus 35 ~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~-----~---~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~af~~~l~lGdv~ 106 (177)
T 3mkq_B 35 ITWERLIQEALAQGNASLAEMIYQTQHSF-----D---KLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTK 106 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTCH-----H---HHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhCCH-----H---HHHHHHHHhCCHHHHHHHHHHHHHCccHHHHHHHHHHcCCHH
Confidence 35788999999999999999999985432 1 2223333344444444444444433322211 111
Q ss_pred HHHHHHHHhhcHHHHHHHHHH
Q 023518 75 RKATACMKLEEYETAKVALEK 95 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~ 95 (281)
.+...|...|++.+|....+.
T Consensus 107 ~~i~lL~~~~r~~eA~~~A~t 127 (177)
T 3mkq_B 107 ERSSIFAEGGSLPLAYAVAKA 127 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHCCChHHHHHHHHH
Confidence 134567788999988765433
No 281
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=85.90 E-value=6.5 Score=29.98 Aligned_cols=53 Identities=13% Similarity=0.036 Sum_probs=28.6
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Q 023518 14 IDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELE 66 (281)
Q Consensus 14 ~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~ 66 (281)
.+|.-++--+.+...+..++-++.+++.+|.+|.++|+-.+|-+...+|.+.+
T Consensus 103 ~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 103 IQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 34444444444444444444456666666666666666666666666665544
No 282
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=85.84 E-value=13 Score=33.19 Aligned_cols=60 Identities=15% Similarity=0.101 Sum_probs=49.8
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHcCC------CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcC
Q 023518 41 DRAQASIKLQNFTEAVADANRAIELEP------SMSKAYWRKATACMKLEEYETAKVALEKGASLA 100 (281)
Q Consensus 41 ~~a~~~~~l~~~~~A~~~~~~al~l~p------~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~ 100 (281)
++|..|+..|+|.+|+..+.+.++--. ...+.+......|..++++.++...+.++....
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~ 169 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTA 169 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhh
Confidence 789999999999999999988886321 235677888899999999999999999987653
No 283
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=85.35 E-value=5.9 Score=30.74 Aligned_cols=27 Identities=7% Similarity=-0.011 Sum_probs=14.9
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 023518 6 EKKAKEAFIDDYFELAYDLYSQAIEIS 32 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~ 32 (281)
+..|..+|+.|+|=+|-+.+..+....
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~ 62 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNY 62 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhc
Confidence 445555555555555555555555543
No 284
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=84.13 E-value=1.9 Score=41.32 Aligned_cols=51 Identities=27% Similarity=0.176 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcH
Q 023518 36 AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEY 86 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~ 86 (281)
.+..+.+|..++..|+|.-|.+.++.++..+|++..+...++.+|.++|.-
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 556777888888888888888888888888888888888888888888864
No 285
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=83.76 E-value=5.6 Score=27.34 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=22.3
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
|..+..+|..+-..|+|++|+.+|..+++.
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 345677777777888888888888877764
No 286
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=80.77 E-value=8 Score=26.94 Aligned_cols=30 Identities=23% Similarity=0.321 Sum_probs=20.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
|..+..+|..+-..++|++|+.+|..+++.
T Consensus 15 Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 15 AVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 345666677777777777777777776654
No 287
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=80.49 E-value=2.2 Score=29.20 Aligned_cols=27 Identities=26% Similarity=0.392 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIE 30 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~ 30 (281)
.+..+|...-..|+|++|+.+|..+++
T Consensus 15 ~l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 15 ELVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 445555555556666666666655554
No 288
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=80.29 E-value=3.7 Score=27.40 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=23.1
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHH
Q 023518 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSAEL 38 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~ 38 (281)
...|..+..+|++++|+.+|.+|+...|+-.++
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 456777777777777777777777777665544
No 289
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=79.63 E-value=2.2 Score=31.29 Aligned_cols=13 Identities=38% Similarity=0.432 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHh
Q 023518 18 FELAYDLYSQAIE 30 (281)
Q Consensus 18 y~~Al~~y~~al~ 30 (281)
++.|+.+..+|++
T Consensus 15 l~kAi~lv~~Ave 27 (117)
T 2cpt_A 15 LQKAIDLASKAAQ 27 (117)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4566666666653
No 290
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=79.63 E-value=3.8 Score=36.97 Aligned_cols=64 Identities=11% Similarity=0.038 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC---CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023518 36 AELFADRAQASIKLQNFTEAVADANRAIELEP---SMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p---~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~ 99 (281)
..++..+|..|+..|++++|+..|.++..... .-...++..-.++...++|..+...+.++..+
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 45788999999999999999999999887542 34678888889999999999999999998765
No 291
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=78.74 E-value=31 Score=30.05 Aligned_cols=26 Identities=19% Similarity=0.125 Sum_probs=22.9
Q ss_pred CcHHHHHHHHHHHHHhhcHHHHHHHH
Q 023518 68 SMSKAYWRKATACMKLEEYETAKVAL 93 (281)
Q Consensus 68 ~~~~a~~~~g~~~~~~g~~~~A~~~~ 93 (281)
.++..+..+|..|...++|.+|..+|
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 46788888999999999999998887
No 292
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=77.31 E-value=7 Score=37.17 Aligned_cols=80 Identities=14% Similarity=-0.007 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhh
Q 023518 18 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGA 97 (281)
Q Consensus 18 y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~ 97 (281)
..++...+.+...... +....-.++...++.|++..|...+.+.-.-........|-+|.++..+|+-++|...|+.+.
T Consensus 268 ~~~~~~~~~~~~~~~~-~~~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a 346 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQ-STSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLM 346 (618)
T ss_dssp CHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ChHHHHHHHhccccCC-ChHHHHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 3455555555444332 222333444445567888888887766544333456777888888888888888888888876
Q ss_pred h
Q 023518 98 S 98 (281)
Q Consensus 98 ~ 98 (281)
.
T Consensus 347 ~ 347 (618)
T 1qsa_A 347 Q 347 (618)
T ss_dssp T
T ss_pred c
Confidence 5
No 293
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=77.22 E-value=18 Score=34.35 Aligned_cols=113 Identities=12% Similarity=-0.091 Sum_probs=70.2
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH-HH-HHHH--HHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023518 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSA-EL-FADR--AQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~-~~-~~~~--a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
...+...+..++.+.|...|........-+. .. ...+ |.-+...+...++...+.+......++....++.+.++
T Consensus 218 ~~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~Al- 296 (618)
T 1qsa_A 218 AAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMAL- 296 (618)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHHH-
T ss_pred HHHHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHHHH-
Confidence 3445556667788999999988754332222 22 2222 22222234356777777777665555544555555554
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023518 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~ 119 (281)
+.|++..|..+|.....-.........|++++...+++
T Consensus 297 r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~ 334 (618)
T 1qsa_A 297 GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGR 334 (618)
T ss_dssp HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTC
T ss_pred HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCC
Confidence 67999999999988766444556678899888665544
No 294
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=76.41 E-value=9.7 Score=26.34 Aligned_cols=28 Identities=18% Similarity=0.348 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
-++..|..+|+.++|.+|+.+|+++...
T Consensus 55 ~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 55 SLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 3455566666666666666666666544
No 295
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=76.29 E-value=33 Score=29.51 Aligned_cols=27 Identities=4% Similarity=-0.239 Sum_probs=23.6
Q ss_pred CcHHHHHHHHHHHHHhhcHHHHHHHHH
Q 023518 68 SMSKAYWRKATACMKLEEYETAKVALE 94 (281)
Q Consensus 68 ~~~~a~~~~g~~~~~~g~~~~A~~~~~ 94 (281)
.++..|..+|..|...|++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 367789999999999999999999885
No 296
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=74.99 E-value=18 Score=31.40 Aligned_cols=102 Identities=14% Similarity=0.092 Sum_probs=59.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCC----CC----HHH--HHHHHHHHHHccCHHHHHH-----HHHHHHHc----
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISP----NS----AEL--FADRAQASIKLQNFTEAVA-----DANRAIEL---- 65 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p----~~----~~~--~~~~a~~~~~l~~~~~A~~-----~~~~al~l---- 65 (281)
.++.|..++..|+|++|+..|+.+|..-+ ++ .++ ++..+.-|+.-=+.+.+.. +-.|.+++
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYF 196 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYF 196 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh
Confidence 46689999999999999999999988732 11 111 2223322222111111111 11222222
Q ss_pred -----CCCc-HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhH
Q 023518 66 -----EPSM-SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 106 (281)
Q Consensus 66 -----~p~~-~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~ 106 (281)
.|.. ..++..--...++.++|..|....++.+++.|....+
T Consensus 197 T~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a 243 (325)
T 3mv2_A 197 TKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRA 243 (325)
T ss_dssp GGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHH
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHH
Confidence 2222 2222222345678899999999999999999965543
No 297
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=73.49 E-value=23 Score=27.27 Aligned_cols=86 Identities=12% Similarity=0.115 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHccCHHHH-HHHHHHHHHcCCCcHHHHHHHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS--AELFADRAQASIKLQNFTEA-VADANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~--~~~~~~~a~~~~~l~~~~~A-~~~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
..+..++.+|...+|.+.+..+.. .+|.. ...-+.+|..|++..++.+- ....-..+.+.. ...+.+-++|
T Consensus 10 ~a~i~a~~afl~~dYs~VI~~L~~---~~~~~Lp~~~kY~LA~SYI~~e~Ls~eQKenIln~itlkS---de~yL~YWIy 83 (161)
T 2ynq_A 10 EAYIQSTELFLQNKYSDVITTLED---YAPEDMPYVIQYELASSYVMTESLTEEQRQTVSNNITLKT---DEQYMLYWIY 83 (161)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHTT---SCGGGSCHHHHHHHHHHHHHTSSSCHHHHHHHHHTCCTTS---CHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhc---CChhhCChhHHHHHHHHHHHccCCCHHHHHHHHhhCCccC---CHHHHHHHHH
Confidence 346678999999999999988876 44443 56788899999998776532 222222222222 2345566788
Q ss_pred HHhhcHHHHHHHHHH
Q 023518 81 MKLEEYETAKVALEK 95 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~ 95 (281)
..+|++++|+..-+.
T Consensus 84 iGRg~~~eAlDiA~~ 98 (161)
T 2ynq_A 84 IGRSQSEEALELART 98 (161)
T ss_dssp HHHTCHHHHHHHHHH
T ss_pred HcCCchHHHHHHHHh
Confidence 889999999875443
No 298
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=73.33 E-value=11 Score=25.10 Aligned_cols=37 Identities=8% Similarity=0.164 Sum_probs=26.7
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHH
Q 023518 74 WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLI 110 (281)
Q Consensus 74 ~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l 110 (281)
..+|..+...|++++|..+|.+|+...|.-..+..-+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~ 57 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 57 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3467777788888888888888888887766554433
No 299
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=73.13 E-value=7.3 Score=35.57 Aligned_cols=88 Identities=5% Similarity=-0.068 Sum_probs=61.8
Q ss_pred cCHHHHHHHHHHHHhcCCC--C----------HH----HHHHHHHHHHHccCHHHHHHHHHHHHHcCC----------Cc
Q 023518 16 DYFELAYDLYSQAIEISPN--S----------AE----LFADRAQASIKLQNFTEAVADANRAIELEP----------SM 69 (281)
Q Consensus 16 ~~y~~Al~~y~~al~~~p~--~----------~~----~~~~~a~~~~~l~~~~~A~~~~~~al~l~p----------~~ 69 (281)
...++|.....++....-+ + -. +..++-.+|+++++...+...++..-.... ..
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccce
Confidence 3457777777777766111 1 11 123355778889998888887755433222 23
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhc-CCCC
Q 023518 70 SKAYWRKATACMKLEEYETAKVALEKGASL-APGD 103 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~-~p~~ 103 (281)
...+|.+|..++..++|.+|..++..|++. .|.+
T Consensus 220 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 220 IEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 567888999999999999999999999998 7765
No 300
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=72.36 E-value=8.8 Score=26.80 Aligned_cols=29 Identities=0% Similarity=-0.135 Sum_probs=21.7
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 023518 6 EKKAKEAFIDDYFELAYDLYSQAIEISPN 34 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~p~ 34 (281)
+..|..+|..|+|=+|-+.+..+....+.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~ 33 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATG 33 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCC
Confidence 45677788888888888888887776643
No 301
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=71.53 E-value=9.7 Score=30.56 Aligned_cols=50 Identities=18% Similarity=0.135 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHH-----HHHHHHHHHHccCHHH
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAEL-----FADRAQASIKLQNFTE 54 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~-----~~~~a~~~~~l~~~~~ 54 (281)
.+-.|..++.+++|.+|.+.+..|++..|.+..- +..+--+.+.+|++..
T Consensus 17 ~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~ 71 (203)
T 3t5x_A 17 KYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT 71 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4667999999999999999999999987766432 2233333345566543
No 302
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=70.97 E-value=21 Score=33.11 Aligned_cols=59 Identities=17% Similarity=0.155 Sum_probs=48.5
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC
Q 023518 8 KAKEAFIDDYFELAYDLYSQAIEISPNS-------AELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (281)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~al~~~p~~-------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~ 68 (281)
.-+.|...+.|+.|..+.+++. .|.+ ..+++..|.++.-.++|.+|.+++..|++..|.
T Consensus 237 lLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~ 302 (523)
T 4b4t_S 237 ILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPH 302 (523)
T ss_dssp HHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSC
T ss_pred HHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 3455777889999999999985 3322 577888999999999999999999999988764
No 303
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=70.20 E-value=27 Score=24.93 Aligned_cols=17 Identities=18% Similarity=0.302 Sum_probs=7.8
Q ss_pred HHHHHHHhhcHHHHHHH
Q 023518 76 KATACMKLEEYETAKVA 92 (281)
Q Consensus 76 ~g~~~~~~g~~~~A~~~ 92 (281)
+...+..+|+|++|...
T Consensus 46 R~sSLmNrG~Yq~Al~l 62 (116)
T 2p58_C 46 RLSSLMNRGDYASALQQ 62 (116)
T ss_dssp HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHcchhHHHHHHh
Confidence 44444444444444433
No 304
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=69.07 E-value=6.7 Score=27.33 Aligned_cols=25 Identities=20% Similarity=0.262 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHH
Q 023518 38 LFADRAQASIKLQNFTEAVADANRA 62 (281)
Q Consensus 38 ~~~~~a~~~~~l~~~~~A~~~~~~a 62 (281)
.+-.+|..+++.|+|++|+.+..+|
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHH
Confidence 3444455555555555555444443
No 305
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=69.00 E-value=56 Score=28.17 Aligned_cols=100 Identities=15% Similarity=0.134 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCC----CCH----HH--HHHHHHHHHHccCHHHHH--------HHHHHHHHc-
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEISP----NSA----EL--FADRAQASIKLQNFTEAV--------ADANRAIEL- 65 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~~p----~~~----~~--~~~~a~~~~~l~~~~~A~--------~~~~~al~l- 65 (281)
.++.|..++..|+|++|+..|+.+|..-+ ++. ++ ++..+.-|+.-=+.+.+. ++..|.+++
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 46789999999999999999999998743 221 11 222222222211111111 222333332
Q ss_pred --------CCCc-HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh
Q 023518 66 --------EPSM-SKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 66 --------~p~~-~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~ 104 (281)
.|.. ..++..--...++.++|..|...-++.+++.|...
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 232 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPE 232 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 2322 22222223456788999999999999999988643
No 306
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=68.96 E-value=32 Score=35.08 Aligned_cols=91 Identities=13% Similarity=0.015 Sum_probs=64.0
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH-cCC--------------------
Q 023518 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE-LEP-------------------- 67 (281)
Q Consensus 9 g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~-l~p-------------------- 67 (281)
...+...+.|+-|.+ .+...+.++...+.+|.+++..|++++|..+|.+|-. +..
T Consensus 819 ~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~ 894 (1139)
T 4fhn_B 819 VEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHH 894 (1139)
T ss_dssp HHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTS
T ss_pred HHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccc
Confidence 344666677665544 3345667777789999999999999999999988742 111
Q ss_pred --CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC
Q 023518 68 --SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD 103 (281)
Q Consensus 68 --~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~ 103 (281)
.....|+.....+.+.+.++.++...+.|++..+.+
T Consensus 895 ~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~ 932 (1139)
T 4fhn_B 895 QNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETD 932 (1139)
T ss_dssp CCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSC
T ss_pred cccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCC
Confidence 122345555667777889999999999998865433
No 307
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=67.74 E-value=28 Score=24.81 Aligned_cols=29 Identities=17% Similarity=0.096 Sum_probs=13.8
Q ss_pred HhcCCCCHHHHHHHHHHHHHccCHHHHHH
Q 023518 29 IEISPNSAELFADRAQASIKLQNFTEAVA 57 (281)
Q Consensus 29 l~~~p~~~~~~~~~a~~~~~l~~~~~A~~ 57 (281)
|...+..--+-+-|...++..|+|++|+.
T Consensus 32 L~~~~~~E~v~lIR~sSLmNrG~Yq~Al~ 60 (115)
T 2uwj_G 32 LERLGQDEAARLIRISSLANQGRYQEALA 60 (115)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTTCHHHHHG
T ss_pred HHhCCcHHHHHHHHHHHHHcchhHHHHHH
Confidence 33333333334445555555566555544
No 308
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=66.80 E-value=9.4 Score=26.59 Aligned_cols=22 Identities=27% Similarity=0.286 Sum_probs=10.1
Q ss_pred HHHHHHHHHhhcHHHHHHHHHH
Q 023518 74 WRKATACMKLEEYETAKVALEK 95 (281)
Q Consensus 74 ~~~g~~~~~~g~~~~A~~~~~~ 95 (281)
-+++..+...|+|++|+.|.++
T Consensus 19 ~RrAe~ll~~gkydeAIech~k 40 (97)
T 2crb_A 19 SRRADRLLAAGKYEEAISCHRK 40 (97)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhHHHHHHhcCCHHHHHHHHHH
Confidence 3444444444555444444333
No 309
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=66.60 E-value=27 Score=34.94 Aligned_cols=26 Identities=12% Similarity=0.010 Sum_probs=14.2
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023518 73 YWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 73 ~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
|+.....+.+.+-|+-++...+.|++
T Consensus 900 Y~hV~~LFE~~~a~~~vi~fA~lAI~ 925 (950)
T 4gq2_M 900 YLHLSKKLFEESAYIDALEFSLLADA 925 (950)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHh
Confidence 33344444555566666666666664
No 310
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=65.62 E-value=43 Score=33.42 Aligned_cols=50 Identities=14% Similarity=0.050 Sum_probs=26.7
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 023518 10 KEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAI 63 (281)
Q Consensus 10 ~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al 63 (281)
..+...+.|+-|. +.+..-|.++..-+.+|.+|+.+|++++|..+|.+|-
T Consensus 818 ~~L~~~~~~~~a~----eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 818 EKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHTTCHHHHH----HHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHhcHHHHHH----HHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 3444445544332 2334445555555566666666666666666666543
No 311
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=68.99 E-value=1.3 Score=42.64 Aligned_cols=52 Identities=19% Similarity=0.145 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHH
Q 023518 37 ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYET 88 (281)
Q Consensus 37 ~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~ 88 (281)
+..+.+|..++..|+|.-|.+.++.++..+|++..+...++.+|.++|.-.+
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~ 513 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTE 513 (668)
Confidence 4456667777777777777777777777777777777777777777776543
No 312
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=64.37 E-value=6.7 Score=27.53 Aligned_cols=30 Identities=17% Similarity=0.227 Sum_probs=19.3
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 023518 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNS 35 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~p~~ 35 (281)
...|..+...|+++.|+.+|.+|+...|+-
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 345666666667777777666666665553
No 313
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=64.35 E-value=57 Score=26.56 Aligned_cols=48 Identities=17% Similarity=0.077 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHH--cCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcC
Q 023518 53 TEAVADANRAIE--LEPSMSKAYWRKATACMKLEEYETAKVALEKGASLA 100 (281)
Q Consensus 53 ~~A~~~~~~al~--l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~ 100 (281)
.++...|..... ++-..+..|...|..+...|+|.+|...|+.+++..
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMK 180 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 355556665554 456678888889999999999999999999999875
No 314
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=64.31 E-value=6.5 Score=26.54 Aligned_cols=27 Identities=19% Similarity=0.170 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
....|+.+...|+|+.|+.+|+.++.+
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 345677777777777777777777665
No 315
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=63.93 E-value=40 Score=26.00 Aligned_cols=60 Identities=7% Similarity=-0.078 Sum_probs=45.4
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------HHHHHH-H--HHHHHHhhcHHHHHHHHHHhhh
Q 023518 39 FADRAQASIKLQNFTEAVADANRAIELEPSM------SKAYWR-K--ATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 39 ~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~~a~~~-~--g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
-+..+..++..|+|-+|-+.++.+-...+.. ..++.+ + |..+++.|+...|...+.+++.
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3556777888899999999999998776543 334444 4 4444567999999999999976
No 316
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=60.62 E-value=15 Score=29.50 Aligned_cols=35 Identities=14% Similarity=-0.049 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcH
Q 023518 36 AELFADRAQASIKLQNFTEAVADANRAIELEPSMS 70 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~ 70 (281)
..+++.+|..++..++|.+|..++..|++..|...
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 34566666666666666666666666666665443
No 317
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=60.50 E-value=20 Score=34.19 Aligned_cols=60 Identities=15% Similarity=0.144 Sum_probs=48.7
Q ss_pred HHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 60 NRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 60 ~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.+.+++-. -....+.+|...+..|+|.-|...+..++..+|+|..++..++.+.++++..
T Consensus 440 ~~~v~~~g-g~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 440 GRYVEYMG-GAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 34444332 3456677888888999999999999999999999999999999999998887
No 318
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=59.88 E-value=30 Score=23.18 Aligned_cols=26 Identities=19% Similarity=0.135 Sum_probs=17.5
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023518 73 YWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 73 ~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
...+|+=|..+|+|+.|+.+|+.++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 35566667777777777777766654
No 319
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=56.15 E-value=43 Score=22.56 Aligned_cols=16 Identities=25% Similarity=0.079 Sum_probs=6.7
Q ss_pred HHhhcHHHHHHHHHHh
Q 023518 81 MKLEEYETAKVALEKG 96 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a 96 (281)
-..|+|++|+.+|..+
T Consensus 30 D~~g~y~eAl~lY~~a 45 (83)
T 2w2u_A 30 DKEGNAEEAITNYKKA 45 (83)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHH
Confidence 3444444444444333
No 320
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=55.17 E-value=17 Score=25.44 Aligned_cols=31 Identities=10% Similarity=0.150 Sum_probs=20.5
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCCChh
Q 023518 75 RKATACMKLEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~ 105 (281)
.+|..+...|+++.|..+|.+|+...|.-..
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~ 55 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQ 55 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHH
Confidence 3666666777777777777777777665443
No 321
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=55.02 E-value=98 Score=27.70 Aligned_cols=62 Identities=10% Similarity=0.125 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHh---cCCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIE---ISPNS----AELFADRAQASIKLQNFTEAVADANRAIEL 65 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~---~~p~~----~~~~~~~a~~~~~l~~~~~A~~~~~~al~l 65 (281)
-+..+...++..+||..|...++++.. ..+.+ ..++...|..+...++|.+|-.+|..++..
T Consensus 179 ~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 179 FILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 456678889999999999999998742 23333 356777888888899999999999888754
No 322
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.66 E-value=31 Score=25.04 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCC
Q 023518 51 NFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (281)
Q Consensus 51 ~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p 101 (281)
.|..|..+..+||.++.. |.-...+.-|.+++..|.+++.+..
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~ 60 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISS 60 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccc
Confidence 466777777777776641 2222333334445555555555544
No 323
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=51.60 E-value=26 Score=30.96 Aligned_cols=25 Identities=16% Similarity=0.102 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHH
Q 023518 38 LFADRAQASIKLQNFTEAVADANRA 62 (281)
Q Consensus 38 ~~~~~a~~~~~l~~~~~A~~~~~~a 62 (281)
.|..+|.+|++.+++.+|+..+..|
T Consensus 298 PYtylgGy~yR~~~~reAl~~WA~A 322 (472)
T 3re2_A 298 PYTYLGGYYYRKKKYYEAIASWVDA 322 (472)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred chhhhhhhhhhcchHHHHHHHHHHH
Confidence 3444555555555555555544443
No 324
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=50.17 E-value=57 Score=22.12 Aligned_cols=16 Identities=25% Similarity=0.333 Sum_probs=6.5
Q ss_pred HHhhcHHHHHHHHHHh
Q 023518 81 MKLEEYETAKVALEKG 96 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a 96 (281)
-..|+|++|+.+|..+
T Consensus 27 D~~g~y~eAl~lY~~A 42 (86)
T 4a5x_A 27 DSESRYPQALVCYQEG 42 (86)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHH
Confidence 3344444444444333
No 325
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=48.77 E-value=58 Score=21.83 Aligned_cols=30 Identities=20% Similarity=0.011 Sum_probs=13.1
Q ss_pred HHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023518 88 TAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 88 ~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l 117 (281)
.|+..|..+++..|+...-.....++..-+
T Consensus 36 ~aie~l~~~lk~e~d~~~k~~ir~K~~eY~ 65 (83)
T 2v6y_A 36 KAIEVLSQIIVLYPESVARTAYEQMINEYK 65 (83)
T ss_dssp HHHHHHHHHHHHCTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 344444445555655443333334443333
No 326
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=48.62 E-value=30 Score=31.16 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=32.5
Q ss_pred HHHHHHHHHhc-----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 023518 21 AYDLYSQAIEI-----SPNSAELFADRAQASIKLQNFTEAVADANRAIE 64 (281)
Q Consensus 21 Al~~y~~al~~-----~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~ 64 (281)
++.+|.+|+.. ...+.--|..+|.+|++.++|.+|+..+..|-.
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 56677777664 334455678888899999999999988776553
No 327
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=47.21 E-value=68 Score=29.35 Aligned_cols=64 Identities=20% Similarity=0.206 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHHHHHHHHHHHHHcCCC-----------cHHHHHHH
Q 023518 36 AELFADRAQASIKL----------------------------QNFTEAVADANRAIELEPS-----------MSKAYWRK 76 (281)
Q Consensus 36 ~~~~~~~a~~~~~l----------------------------~~~~~A~~~~~~al~l~p~-----------~~~a~~~~ 76 (281)
+++++.||.+|+.+ .-|+..+.+++.|+..-|. -..|+..+
T Consensus 109 aea~flRA~~yf~L~~~~G~VP~~~~~~~~~~~~~~~r~~~~ev~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~all 188 (517)
T 3qnk_A 109 GEVHFLRAMFYFEMVKRYGGVILLDKVLTMEDNWEIPRSSEKECYDFILEDLKKATEMLPASYGSREKGRATKGAAYALK 188 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCCSSCCCTTSCCCCCCCCHHHHHHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCceeeCCcCCccccccCCCCCHHHHHHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHH
Confidence 56777788888776 1155567788888765442 25588889
Q ss_pred HHHHHHhhcHHHHHHHHHHhhhc
Q 023518 77 ATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 77 g~~~~~~g~~~~A~~~~~~a~~~ 99 (281)
|.+|+..++|++|..+.++++..
T Consensus 189 arv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 189 SRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999864
No 328
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=45.31 E-value=30 Score=31.47 Aligned_cols=59 Identities=12% Similarity=-0.041 Sum_probs=41.3
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcC--------CC--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHc-CCC
Q 023518 10 KEAFIDDYFELAYDLYSQAIEIS--------PN--SAELFADRAQASIKLQNFTEAVADANRAIEL-EPS 68 (281)
Q Consensus 10 ~~~~~~~~y~~Al~~y~~al~~~--------p~--~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-~p~ 68 (281)
..||+.++..-|-..+...-... |. -..+++..|..+...++|.+|.+++..|++. .|.
T Consensus 184 kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~ 253 (455)
T 3t5v_B 184 NIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNL 253 (455)
T ss_dssp HHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCc
Confidence 55677777777666665432221 11 1567888888888889999999988888887 654
No 329
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=44.26 E-value=75 Score=21.80 Aligned_cols=7 Identities=0% Similarity=-0.344 Sum_probs=2.6
Q ss_pred HhhhcCC
Q 023518 95 KGASLAP 101 (281)
Q Consensus 95 ~a~~~~p 101 (281)
.+++..+
T Consensus 47 ~alk~e~ 53 (93)
T 1wfd_A 47 QVLKGTK 53 (93)
T ss_dssp HHHHTCC
T ss_pred HHHHHCC
Confidence 3333343
No 330
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=43.51 E-value=62 Score=29.33 Aligned_cols=63 Identities=22% Similarity=0.169 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHHHHHHHHHHHHHcCCC--------cHHHHHHHHHH
Q 023518 36 AELFADRAQASIKL----------------------------QNFTEAVADANRAIELEPS--------MSKAYWRKATA 79 (281)
Q Consensus 36 ~~~~~~~a~~~~~l----------------------------~~~~~A~~~~~~al~l~p~--------~~~a~~~~g~~ 79 (281)
+++++.||.+|+.+ .-|+..+.+++.|+..-|. -..++..+|.+
T Consensus 110 aEa~flRA~~yf~L~~~fG~VP~~~~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarv 189 (481)
T 3jq1_A 110 GECLFIRGFYLFQLAKEFKDAPLRLTASQSPSTFPLAKSSQADIWAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKI 189 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHSSEECCCCCCSSCCCSCCCEECHHHHHHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCeeeeccCCCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHH
Confidence 56788888888876 1156678888888875442 35588889999
Q ss_pred HHHhhcHHHHHHHHHHhhh
Q 023518 80 CMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 80 ~~~~g~~~~A~~~~~~a~~ 98 (281)
|+..++|++|..+++.++.
T Consensus 190 yL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 190 YVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHTTCHHHHHHHHGGGGS
T ss_pred HHHHhHHHHHHHHHHHHHh
Confidence 9999999999999988764
No 331
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=41.51 E-value=64 Score=20.21 Aligned_cols=50 Identities=20% Similarity=0.138 Sum_probs=24.6
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhhcHHHHH
Q 023518 40 ADRAQASIKLQNFTEAVADANRAIELEPS-MSKAYWRKATACMKLEEYETAK 90 (281)
Q Consensus 40 ~~~a~~~~~l~~~~~A~~~~~~al~l~p~-~~~a~~~~g~~~~~~g~~~~A~ 90 (281)
...|..-...+..++|...++ .+...+. .--+-.-+...+..+|+|++|+
T Consensus 10 Ae~AL~~TG~HcH~EA~tIA~-~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 10 AELALAGTGHHCHQEAASIAD-WLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHHTTTCHHHHHHHHH-HHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHccchHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 334444455567777766444 3444444 3345555777888888888775
No 332
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=41.48 E-value=81 Score=28.47 Aligned_cols=64 Identities=27% Similarity=0.107 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHHHHHHHHHHHHHcCCC-------------------
Q 023518 36 AELFADRAQASIKL----------------------------QNFTEAVADANRAIELEPS------------------- 68 (281)
Q Consensus 36 ~~~~~~~a~~~~~l----------------------------~~~~~A~~~~~~al~l~p~------------------- 68 (281)
+++++.||.+|+.+ .-|+..+.+++.|+.+-|.
T Consensus 112 gEa~flRA~~yf~L~~~fG~VP~~~~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~ 191 (478)
T 3hdx_A 112 AQVRALRAFAYFYMVRIWGDVPLVTYSYDNGTFPSMPRTDAQTVLSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQG 191 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHSSBCCCCSCCCTTCCCCCCCBCHHHHHHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTT
T ss_pred HHHHHHHHHHHHHHHHHhCCeeeeccCCCcccccCCCCCCHHHHHHHHHHHHHHHHHhCcccccCCcccccccccccccc
Confidence 56788888888876 1155567788888764331
Q ss_pred ----cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023518 69 ----MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 69 ----~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~ 99 (281)
-..++..+|.+|+..|+|++|..+.++++..
T Consensus 192 ~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 192 KLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp TSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 2457888999999999999999999998854
No 333
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=40.21 E-value=2e+02 Score=29.23 Aligned_cols=69 Identities=6% Similarity=-0.110 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHc----CCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc--CCCChhH
Q 023518 38 LFADRAQASIKLQNFTEAVADANRAIEL----EPSMSKAYWRKATACMKLEEYETAKVALEKGASL--APGDSRF 106 (281)
Q Consensus 38 ~~~~~a~~~~~l~~~~~A~~~~~~al~l----~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~--~p~~~~~ 106 (281)
.|..+-.+|.+.|+.++|...+....++ ..-+...|-.+-..|.+.|+.++|...|.+..+. .|+-..+
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTY 203 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSY 203 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHH
Confidence 4777888999999999999999765432 2235567777888999999999999999988764 4544433
No 334
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=39.93 E-value=1.2e+02 Score=22.97 Aligned_cols=48 Identities=15% Similarity=0.035 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHH--cCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcC
Q 023518 53 TEAVADANRAIE--LEPSMSKAYWRKATACMKLEEYETAKVALEKGASLA 100 (281)
Q Consensus 53 ~~A~~~~~~al~--l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~ 100 (281)
.++...|..... ++-..+..|-..|..+...|++.+|...|+.+++..
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 131 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQ 131 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 346666666654 456678888889999999999999999999999874
No 335
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=39.20 E-value=27 Score=23.99 Aligned_cols=38 Identities=8% Similarity=-0.039 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 023518 18 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAI 63 (281)
Q Consensus 18 y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al 63 (281)
++.|.+.++-| ..|+.-|.-|+..|++..|+.++.=+-
T Consensus 29 ~~~a~~~l~mA--------~~Y~~Da~~fl~kGD~v~Ala~isYa~ 66 (87)
T 2pmr_A 29 SDDEEAVVERA--------LNYRDDSVYYLEKGDHITSFGCITYAH 66 (87)
T ss_dssp CHHHHHHHHHH--------HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH--------HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45667777774 456667777778888888877665443
No 336
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=38.41 E-value=87 Score=20.88 Aligned_cols=13 Identities=15% Similarity=0.210 Sum_probs=5.0
Q ss_pred cCHHHHHHHHHHH
Q 023518 50 QNFTEAVADANRA 62 (281)
Q Consensus 50 ~~~~~A~~~~~~a 62 (281)
|+|++|+..|..+
T Consensus 27 g~y~eAl~~Y~~a 39 (85)
T 2v6x_A 27 TQYEEAYTAYYNG 39 (85)
T ss_dssp TCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 3333333333333
No 337
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=38.36 E-value=28 Score=23.81 Aligned_cols=22 Identities=5% Similarity=0.075 Sum_probs=11.6
Q ss_pred HHHHHHHHHHccCHHHHHHHHH
Q 023518 39 FADRAQASIKLQNFTEAVADAN 60 (281)
Q Consensus 39 ~~~~a~~~~~l~~~~~A~~~~~ 60 (281)
|+.-|.-|+..|++..|+.++.
T Consensus 38 Y~~Da~~fl~kGD~v~Ala~is 59 (86)
T 2oo2_A 38 YISDSRYFLEKGDLVRAFECVV 59 (86)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHH
Confidence 4444555555555555555444
No 338
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=38.15 E-value=79 Score=28.58 Aligned_cols=64 Identities=17% Similarity=0.004 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHH-HHHHHHHHHHHc-CC--------CcHHHHHHHH
Q 023518 36 AELFADRAQASIKL----------------------------QNFT-EAVADANRAIEL-EP--------SMSKAYWRKA 77 (281)
Q Consensus 36 ~~~~~~~a~~~~~l----------------------------~~~~-~A~~~~~~al~l-~p--------~~~~a~~~~g 77 (281)
+++++.||.+|+.+ .-|+ ..+.+++.|+.. -| .-..++..+|
T Consensus 116 aEa~flRA~~Yf~L~~~~G~VPl~~~~~~~~~~~~~~r~~~~evy~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~alla 195 (482)
T 3otn_A 116 AEVKFMRALYYFYLVRIFGDVPKITTVQSELGELQVSRAPVKEIYDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLA 195 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHSSBCCCCSCGGGCSCSSCCCBCHHHHHHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCcceeCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHH
Confidence 56788888888876 1155 577788888876 33 2356888899
Q ss_pred HHHHHhh---------cHHHHHHHHHHhhhc
Q 023518 78 TACMKLE---------EYETAKVALEKGASL 99 (281)
Q Consensus 78 ~~~~~~g---------~~~~A~~~~~~a~~~ 99 (281)
.+|+..+ +|++|..+.+.++..
T Consensus 196 rvyL~~~~~~~~~~~~~~~~A~~~a~~vi~~ 226 (482)
T 3otn_A 196 DVYLTYAGYPLQGGKSYYAESAKRSLEVIKS 226 (482)
T ss_dssp HHHHHHHSTTTCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCcccCcHHHHHHHHHHHHHHHcc
Confidence 9999988 999999999988763
No 339
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=38.05 E-value=97 Score=21.35 Aligned_cols=48 Identities=17% Similarity=0.382 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC--hh-HHHHHHHHHHHH
Q 023518 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGD--SR-FTNLIKECEERI 117 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~--~~-~~~~l~~~~~~l 117 (281)
+......|.-+++.++|.+|...|+++..+..+. .. +...+..|...+
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~kkl 103 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECRKKL 103 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHh
Confidence 3445556667777788888888887776543321 11 224556665554
No 340
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=38.01 E-value=73 Score=28.59 Aligned_cols=47 Identities=11% Similarity=-0.014 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHcCCC--------cHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023518 52 FTEAVADANRAIELEPS--------MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p~--------~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
|+..+.+++.|+.+-|. -..++..+|.+|+..|+|++|..+.+.++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 45567788888876442 356888899999999999999999988875
No 341
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=37.95 E-value=44 Score=24.17 Aligned_cols=10 Identities=30% Similarity=0.335 Sum_probs=4.2
Q ss_pred HHHHHHHHHH
Q 023518 54 EAVADANRAI 63 (281)
Q Consensus 54 ~A~~~~~~al 63 (281)
.|+..+.+|+
T Consensus 17 kAi~lv~~Av 26 (117)
T 2cpt_A 17 KAIDLASKAA 26 (117)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444444443
No 342
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=37.70 E-value=2.1e+02 Score=25.06 Aligned_cols=87 Identities=6% Similarity=-0.089 Sum_probs=59.3
Q ss_pred HHHhcCHHHHHHHHHHHHhcC-------C--------CC--HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-------CC
Q 023518 12 AFIDDYFELAYDLYSQAIEIS-------P--------NS--AELFADRAQASIKLQNFTEAVADANRAIEL-------EP 67 (281)
Q Consensus 12 ~~~~~~y~~Al~~y~~al~~~-------p--------~~--~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-------~p 67 (281)
.-...+.++|++.+.+....- . .. ..+....+..|+..++..+|....+++-.. ++
T Consensus 86 ~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~ 165 (393)
T 4b4t_O 86 LKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPL 165 (393)
T ss_dssp HHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSS
T ss_pred HhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccH
Confidence 345678999999988764321 0 11 344566788888999999999988887642 12
Q ss_pred C-cHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023518 68 S-MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 68 ~-~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
. ....|...+..|...++|..+...+-.++.
T Consensus 166 ~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 166 RITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 1 244455566667778899888887777665
No 343
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=37.09 E-value=7.1 Score=32.69 Aligned_cols=28 Identities=21% Similarity=0.285 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
.+..+|..+-+.|+|++|+.+|..+++.
T Consensus 25 ~lv~~AVe~D~~g~y~eAl~lY~eaIe~ 52 (257)
T 2ymb_A 25 TVLKRAVELDSESRYPQALVCYQEGIDL 52 (257)
T ss_dssp ----------------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4555666666666666666666666654
No 344
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=36.60 E-value=79 Score=28.41 Aligned_cols=47 Identities=21% Similarity=0.196 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHcCCC--------cHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023518 52 FTEAVADANRAIELEPS--------MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p~--------~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
|+..+.+++.|+.+-|. -..++..+|.+|+..|+|++|..+.+.++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 45567788888775442 356888899999999999999999988875
No 345
>3dza_A Uncharacterized putative membrane protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=36.57 E-value=86 Score=24.81 Aligned_cols=61 Identities=20% Similarity=0.065 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHh-cC------CC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQAIE-IS------PN-SAELFADRAQASIKLQNFTEAVADANRAIE 64 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~al~-~~------p~-~~~~~~~~a~~~~~l~~~~~A~~~~~~al~ 64 (281)
..+..++.+++.|+-..|++.+.-+=. .+ |= ...-.+.+|..++..|+|.+|-..+..+..
T Consensus 110 aAI~~AN~~Lk~Gd~~~A~~~LklAgvdv~~~~allPL~qT~~~V~~A~~ll~~gk~yeAn~aLk~Aed 178 (191)
T 3dza_A 110 SAIQSANEKLAKGDQKGAIDTLRLAGIGVIENQYLMPLNQTRKAVAQSQELLKAGKYYEANLVLKGAEE 178 (191)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTTCEEEEEEEEEEHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHcCCchhhhhhhCChHhHHHHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 456788888888988888887766421 11 10 134567788888888888888777776653
No 346
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=36.56 E-value=1e+02 Score=21.21 Aligned_cols=57 Identities=11% Similarity=-0.060 Sum_probs=39.2
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHcCCCc----HHHHHHHHHHH--HHhhcHHHHHHHHHHhhh
Q 023518 40 ADRAQASIKLQNFTEAVADANRAIELEPSM----SKAYWRKATAC--MKLEEYETAKVALEKGAS 98 (281)
Q Consensus 40 ~~~a~~~~~l~~~~~A~~~~~~al~l~p~~----~~a~~~~g~~~--~~~g~~~~A~~~~~~a~~ 98 (281)
+..|..++..|+|-+|-+.++.+-...+.. ..+..+++.++ ...|+. |...+.+++.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 346677778899999999999888877543 23444444444 445666 8888888765
No 347
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=36.17 E-value=61 Score=29.17 Aligned_cols=25 Identities=16% Similarity=0.050 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHH
Q 023518 38 LFADRAQASIKLQNFTEAVADANRA 62 (281)
Q Consensus 38 ~~~~~a~~~~~l~~~~~A~~~~~~a 62 (281)
.|..+|-++++.++|.+|++.+..|
T Consensus 305 PYtYlgG~~~R~~~~~eAl~~wa~a 329 (489)
T 4gq4_A 305 PYMYLAGYHCRNRNVREALQAWADT 329 (489)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ceeecchHHHHhhhHHHHHHHhhhh
Confidence 3455555555556666666555544
No 348
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=35.08 E-value=1.3e+02 Score=27.68 Aligned_cols=63 Identities=19% Similarity=0.110 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHHHHHHHHHHHHHcCCC-------------cHHHHH
Q 023518 36 AELFADRAQASIKL----------------------------QNFTEAVADANRAIELEPS-------------MSKAYW 74 (281)
Q Consensus 36 ~~~~~~~a~~~~~l----------------------------~~~~~A~~~~~~al~l~p~-------------~~~a~~ 74 (281)
+++++.||.+|+.+ .-|+..+.+++.|+..-|. -..|+.
T Consensus 123 aEa~flRA~~Yf~L~~~yG~VPl~~~~~~~~~~~~~~r~~~~ev~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~a 202 (528)
T 3i4g_A 123 AEARFLRATQYFYLASYFKNVPLVENVLTGEEANNVTKTSQADILKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALA 202 (528)
T ss_dssp HHHHHHHHHHHHHHHHHTCSBCCCCSCCCHHHHTTCCCBCHHHHHHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcceeCCCCCccccccCCCCCHHHHHHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHH
Confidence 56778888888776 1144557777777765551 245888
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhh
Q 023518 75 RKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
.+|.+|+..++|++|..+.+.++.
T Consensus 203 llarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 203 FLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHh
Confidence 899999999999999999998875
No 349
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=34.29 E-value=1e+02 Score=27.66 Aligned_cols=47 Identities=13% Similarity=0.135 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHhcCCC--------CHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 023518 18 FELAYDLYSQAIEISPN--------SAELFADRAQASIKLQNFTEAVADANRAIE 64 (281)
Q Consensus 18 y~~Al~~y~~al~~~p~--------~~~~~~~~a~~~~~l~~~~~A~~~~~~al~ 64 (281)
|+..+..++.|+..-|. -..++..+|.+|+-+++|++|+..++.++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 34444445555544332 256788899999999999999999999985
No 350
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=34.04 E-value=89 Score=28.16 Aligned_cols=48 Identities=17% Similarity=0.101 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHcCCC--------cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023518 52 FTEAVADANRAIELEPS--------MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p~--------~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~ 99 (281)
|+..+.+++.|+.+-|. -..++..+|.+|+..|+|++|..+.+.++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 55567888888876542 3568888999999999999999999998764
No 351
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=34.02 E-value=48 Score=24.98 Aligned_cols=30 Identities=20% Similarity=0.259 Sum_probs=23.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
|..++..|..|...|+++.|.-+|-+.+.+
T Consensus 40 a~~llr~A~~y~~egd~e~AYily~R~~~L 69 (146)
T 2xze_A 40 GVEIIRMASIYSEEGNIEHAFILYNKYITL 69 (146)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 456788888888888888888888886443
No 352
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=30.97 E-value=1.2e+02 Score=27.30 Aligned_cols=30 Identities=17% Similarity=0.094 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Q 023518 36 AELFADRAQASIKLQNFTEAVADANRAIEL 65 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l 65 (281)
..++..+|.+|+-+++|++|+..++.++..
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 567888999999999999999999999863
No 353
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=30.88 E-value=1.1e+02 Score=27.87 Aligned_cols=48 Identities=23% Similarity=0.326 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHcCCC-----------cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023518 52 FTEAVADANRAIELEPS-----------MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p~-----------~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~ 99 (281)
|+..+.+++.|+.+-|. -..++..+|.+|+..|+|++|..+.++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 44457777777765432 2568888999999999999999999999865
No 354
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=30.77 E-value=1.2e+02 Score=27.24 Aligned_cols=49 Identities=14% Similarity=0.075 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhcCCC--------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Q 023518 18 FELAYDLYSQAIEISPN--------SAELFADRAQASIKLQNFTEAVADANRAIELE 66 (281)
Q Consensus 18 y~~Al~~y~~al~~~p~--------~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~ 66 (281)
|+.-+.-+..|+..-|. -..++..+|.+|+-+++|++|+..++.++...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 44555556666655332 24678889999999999999999999999754
No 355
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=29.83 E-value=1.3e+02 Score=27.37 Aligned_cols=31 Identities=6% Similarity=0.159 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Q 023518 36 AELFADRAQASIKLQNFTEAVADANRAIELE 66 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~ 66 (281)
..++..+|.+|+-+++|++|+..++.++...
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 5678889999999999999999999999753
No 356
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=29.73 E-value=1.9e+02 Score=26.09 Aligned_cols=44 Identities=16% Similarity=0.013 Sum_probs=31.6
Q ss_pred cHHHHHHHHHHHHHhhcHHHHHHHHHHhhh------cCCCChhHHHHHHH
Q 023518 69 MSKAYWRKATACMKLEEYETAKVALEKGAS------LAPGDSRFTNLIKE 112 (281)
Q Consensus 69 ~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~------~~p~~~~~~~~l~~ 112 (281)
..-.|..+|-.+++.++|.+|+.++..+-. ...+|.++...+..
T Consensus 302 hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~e 351 (489)
T 4gq4_A 302 HIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFE 351 (489)
T ss_dssp CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHH
T ss_pred cccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHH
Confidence 345777889999999999999999988754 23445555444433
No 357
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=29.66 E-value=1.6e+02 Score=23.98 Aligned_cols=15 Identities=27% Similarity=0.135 Sum_probs=6.6
Q ss_pred ccCHHHHHHHHHHHH
Q 023518 49 LQNFTEAVADANRAI 63 (281)
Q Consensus 49 l~~~~~A~~~~~~al 63 (281)
+++.++|...+++|+
T Consensus 186 l~~~~~A~~lAk~af 200 (234)
T 2br9_A 186 LNSPDRACRLAKAAF 200 (234)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 344444444444433
No 358
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=28.64 E-value=72 Score=22.62 Aligned_cols=29 Identities=24% Similarity=0.025 Sum_probs=19.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE 30 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~ 30 (281)
|+.+...|..+.+.|+|++|.+.+.++-+
T Consensus 20 ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~ 48 (105)
T 2e2a_A 20 ARSKLLEALKAAENGDFAKADSLVVEAGS 48 (105)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34455666777778888888777776543
No 359
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=28.40 E-value=1.6e+02 Score=20.90 Aligned_cols=76 Identities=17% Similarity=0.091 Sum_probs=47.7
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023518 39 FADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 39 ~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~ 118 (281)
+..+|.+-...+..++|...++ .+...+..--+-+-+...+..+|+|++|....+.. + .+++.-|++-|..+++
T Consensus 9 LAE~AL~gTG~H~HqEA~tIAd-wL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~----c-~pdlepw~ALce~rlG 82 (115)
T 2uwj_G 9 LAELALAGSGQHCHEEALCIAE-WLERLGQDEAARLIRISSLANQGRYQEALAFAHGN----P-WPALEPWFALCEWHLG 82 (115)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHTTCHHHHHGGGTTC----C-CGGGHHHHHHHHHHTT
T ss_pred HHHHHHHHccchHHHHHHHHHH-HHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCC----C-CchHHHHHHHHHHhcc
Confidence 3445555556677888866544 34444444445566778888999998888654322 1 5667777777776655
Q ss_pred hh
Q 023518 119 EE 120 (281)
Q Consensus 119 ~~ 120 (281)
-.
T Consensus 83 l~ 84 (115)
T 2uwj_G 83 LG 84 (115)
T ss_dssp CH
T ss_pred cH
Confidence 43
No 360
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=28.18 E-value=22 Score=25.69 Aligned_cols=23 Identities=13% Similarity=0.251 Sum_probs=18.4
Q ss_pred ccCcceEEEeCcEEEEEEeecCC
Q 023518 231 IPAKCRYEVLSTKVEIRLAKAEP 253 (281)
Q Consensus 231 ~~~~s~~~v~~~kiei~L~K~~~ 253 (281)
.|+..+.++.+..|.|++.|+..
T Consensus 78 lp~~v~v~v~P~~V~V~i~~~~~ 100 (119)
T 2kq1_A 78 FPGDLAVTVEPRMARVQLEERQT 100 (119)
T ss_dssp SCTTSEEEESCCEEEEEEESCCC
T ss_pred CCCCeEEEEcCCEEEEEEEEEEE
Confidence 36666688999999999999753
No 361
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=28.10 E-value=75 Score=22.44 Aligned_cols=29 Identities=21% Similarity=0.090 Sum_probs=20.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE 30 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~ 30 (281)
|+.+...|..+.+.|+|++|.+.+.++-+
T Consensus 18 Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~ 46 (103)
T 1wcr_A 18 ARSLAYAALKQAKQGDFAAAKAMMDQSRM 46 (103)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34556667777788888888877776543
No 362
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=28.00 E-value=1.6e+02 Score=20.88 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=46.9
Q ss_pred hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHH
Q 023518 15 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVAL 93 (281)
Q Consensus 15 ~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~ 93 (281)
....++|...- ..|...+..--+-+-|...++..|+|++|+...+... -.+...| .+.|-.++|--.++...+
T Consensus 20 ~H~HqEA~tIA-dwL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c---~pdlepw--~ALce~rlGl~s~le~rL 92 (116)
T 2p58_C 20 NHYHEEANCIA-EWLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLA---YPDLEPW--LALCEYRLGLGSALESRL 92 (116)
T ss_dssp TTCHHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTSC---CGGGHHH--HHHHHHHHTCHHHHHHHH
T ss_pred chHHHHHHHHH-HHHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC---CchHHHH--HHHHHHhcccHHHHHHHH
Confidence 34556665543 3455556654556678888999999999987554322 2233444 466677788877777776
No 363
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=27.78 E-value=89 Score=22.71 Aligned_cols=50 Identities=14% Similarity=0.375 Sum_probs=35.1
Q ss_pred cCCCeEEEEEEecCCCCcceEEEEeee-EEEEEEEcCCCc-eeeecc-ccccc
Q 023518 180 QKPEEVVVTVFAKGIPAKNVTVDFGEQ-ILSVSIDVPGEE-AYHFQP-RLFGK 229 (281)
Q Consensus 180 Qt~~~V~i~v~~k~~~~~~~~v~~~~~-~l~~~~~~~~~~-~~~~~~-~L~~~ 229 (281)
|.++.|.+++.++|...+.+.++|.+. ...|.+...+|. .|.++= +.|-.
T Consensus 15 ~~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQ 67 (120)
T 3isy_A 15 QEPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQ 67 (120)
T ss_dssp ECSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCC
T ss_pred cCCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhh
Confidence 567789999999999899999999874 568887664443 333333 44444
No 364
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.05 E-value=86 Score=22.66 Aligned_cols=79 Identities=11% Similarity=0.203 Sum_probs=45.7
Q ss_pred hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHH
Q 023518 15 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALE 94 (281)
Q Consensus 15 ~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~ 94 (281)
...|.+|..+.+++|..+.. +.-...+.-|..++..+.++|.+...-+. ..-..|++|...-.
T Consensus 16 k~~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~---------~~g~~we~Ar~lq~ 78 (116)
T 2dl1_A 16 REAYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSKESE---------HTGPGWESARQMQQ 78 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCCCTT---------CCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccccCCC---------CCChhHHHHHHHHH
Confidence 45678889999998887652 33333334466667777777776653211 12234556655543
Q ss_pred HhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 95 KGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 95 ~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+ ....+..+..+|...
T Consensus 79 K----------M~~nL~~v~~RL~~L 94 (116)
T 2dl1_A 79 K----------MKETLQNVRTRLEIL 94 (116)
T ss_dssp H----------HHHHHHHHHHHHHHH
T ss_pred H----------HHHHHHHHHHHHHHH
Confidence 3 345556666666655
No 365
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=26.88 E-value=2.4e+02 Score=22.43 Aligned_cols=77 Identities=17% Similarity=0.110 Sum_probs=53.9
Q ss_pred HHHHHHHhcCC------CCH---HHHHHHHHHHHHccCHHHHHHHHHHHHH--cCCCcHHHHHHHHHHHHHhhcHHHHHH
Q 023518 23 DLYSQAIEISP------NSA---ELFADRAQASIKLQNFTEAVADANRAIE--LEPSMSKAYWRKATACMKLEEYETAKV 91 (281)
Q Consensus 23 ~~y~~al~~~p------~~~---~~~~~~a~~~~~l~~~~~A~~~~~~al~--l~p~~~~a~~~~g~~~~~~g~~~~A~~ 91 (281)
.++.+++...- +|+ .+|+..+..+ ..++..++...|..... ++-..+..|-..|..+...|+|.+|..
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~ 136 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKV 136 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 45666665422 233 3444444433 12336688888877665 556778888889999999999999999
Q ss_pred HHHHhhhcC
Q 023518 92 ALEKGASLA 100 (281)
Q Consensus 92 ~~~~a~~~~ 100 (281)
.|+.+++..
T Consensus 137 Vy~~GI~~~ 145 (202)
T 3esl_A 137 LLELGAENN 145 (202)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999875
No 366
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=26.51 E-value=82 Score=22.49 Aligned_cols=29 Identities=17% Similarity=0.035 Sum_probs=20.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE 30 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~ 30 (281)
|+.....|..+.+.|+|++|.+.+.++-+
T Consensus 22 Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~ 50 (109)
T 3k1s_A 22 ARSFAMEALQFAKQGKMAEADEAMVKAKE 50 (109)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34556667777788888888888777543
No 367
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=26.20 E-value=14 Score=33.32 Aligned_cols=30 Identities=33% Similarity=0.426 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
|..+..+|..+-+.|+|++|+.+|..+++.
T Consensus 11 A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~ 40 (444)
T 2zan_A 11 AIDLASKAAQEDKAGNYEEALQLYQHAVQY 40 (444)
T ss_dssp ------------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 446777888888999999999999998886
No 368
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=32.16 E-value=14 Score=35.42 Aligned_cols=51 Identities=14% Similarity=0.133 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023518 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~l~~~ 120 (281)
....+.+|...+..|+|.-|...+..++..+|+|..++..++.+.++++..
T Consensus 461 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~ 511 (668)
T 2yhe_A 461 ADAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQ 511 (668)
Confidence 345677888888999999999999999999999999999999999988877
No 369
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=26.00 E-value=88 Score=23.08 Aligned_cols=30 Identities=23% Similarity=0.145 Sum_probs=26.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
|+.++..|..++..||.-+|-+.|-+|...
T Consensus 7 Ae~yL~EA~ell~kGD~vQAsEK~ykAaee 36 (129)
T 2jpu_A 7 AEVYYEEAEEFLSKGDLVQACEKYYKAAEE 36 (129)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 678899999999999999999988887764
No 370
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=25.84 E-value=2e+02 Score=23.82 Aligned_cols=24 Identities=17% Similarity=0.088 Sum_probs=11.2
Q ss_pred HHHHHHHHH-ccCHHHHHHHHHHHH
Q 023518 40 ADRAQASIK-LQNFTEAVADANRAI 63 (281)
Q Consensus 40 ~~~a~~~~~-l~~~~~A~~~~~~al 63 (281)
++.+..|+. +++.++|+..+.+|+
T Consensus 201 LNfSVFyYEiln~~~~Ac~lAk~Af 225 (260)
T 2npm_A 201 LNFSVFHYEILNEPRAAIDMAKEAF 225 (260)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 333333333 455555555555544
No 371
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=25.45 E-value=1.7e+02 Score=20.35 Aligned_cols=24 Identities=25% Similarity=0.137 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHH
Q 023518 4 DLEKKAKEAFIDDYFELAYDLYSQ 27 (281)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~ 27 (281)
..+..+...+..++|..|-.+..+
T Consensus 36 dKl~~A~~Am~~~~y~~Ar~lAEq 59 (98)
T 4fm3_A 36 DKYAAAQIAMTAESYKKARLLAEQ 59 (98)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHH
Confidence 344444555555555555544444
No 372
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=25.25 E-value=1.2e+02 Score=26.74 Aligned_cols=44 Identities=14% Similarity=0.011 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcC-----CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023518 55 AVADANRAIELE-----PSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 55 A~~~~~~al~l~-----p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
++..|.+|+... -...-.|..+|..+++.++|.+|+.++..+-.
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 455555555432 23345777889999999999999999987754
No 373
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=25.21 E-value=88 Score=22.78 Aligned_cols=28 Identities=21% Similarity=0.204 Sum_probs=18.3
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023518 2 ATDLEKKAKEAFIDDYFELAYDLYSQAI 29 (281)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~al 29 (281)
|+.+...|..+.+.|+|++|.+.+.++-
T Consensus 37 ARS~~~eAl~~Ak~gdfe~A~~~l~eA~ 64 (120)
T 3l8r_A 37 ARSIVHEAFDAMREKNYILAEQKLQEAN 64 (120)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3445556666777777777777776653
No 374
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=25.01 E-value=2.3e+02 Score=21.54 Aligned_cols=53 Identities=8% Similarity=-0.053 Sum_probs=38.0
Q ss_pred HccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcC
Q 023518 48 KLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLA 100 (281)
Q Consensus 48 ~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~ 100 (281)
..|+-+.-...+...+...+-++...+.+|.+|.++|+-.+|...+.+|-+..
T Consensus 103 ~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 103 IQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 34444444444444445556678999999999999999999999999987654
No 375
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=24.81 E-value=2.3e+02 Score=25.55 Aligned_cols=63 Identities=16% Similarity=0.049 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHc------------------------cCHHHHHHHHHHHHHcCCC----------cHHHHHHHHHHHH
Q 023518 36 AELFADRAQASIKL------------------------QNFTEAVADANRAIELEPS----------MSKAYWRKATACM 81 (281)
Q Consensus 36 ~~~~~~~a~~~~~l------------------------~~~~~A~~~~~~al~l~p~----------~~~a~~~~g~~~~ 81 (281)
+++++.||.+|+.| .=|+..+.+++.|+..-|. -..|+..+|.+|+
T Consensus 129 gEA~flRA~~Yf~Lv~~fG~VPl~~~~~~~~~~R~s~~evy~~I~~DL~~A~~~Lp~~~~~~~gr~tk~aA~allArvyL 208 (527)
T 3ckc_A 129 AEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELNEIEADMYEPRQAPFGRADKAANWLLRARLYL 208 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEECSSCSSSCCEEEEHHHHHHHHHHHHHHHGGGSCCTTCSCTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCccCCccccCCCcCCHHHHHHHHHHHHHHHHHhCccCCCCCCCcHHHHHHHHHHHHHHH
Confidence 57788899888876 1156678888888875442 2557777888888
Q ss_pred Hh------hcHHHHHHHHHHhhh
Q 023518 82 KL------EEYETAKVALEKGAS 98 (281)
Q Consensus 82 ~~------g~~~~A~~~~~~a~~ 98 (281)
.. ++|++|..+.++++.
T Consensus 209 ~~~~~~~~~~~~~A~~~a~~vi~ 231 (527)
T 3ckc_A 209 NAGVYTGQTDYAKAEEYASKVIG 231 (527)
T ss_dssp THHHHHSSCCHHHHHHHHHHHHT
T ss_pred hhhhccCchhHHHHHHHHHHHHh
Confidence 65 799999999999885
No 376
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=24.56 E-value=2.3e+02 Score=23.36 Aligned_cols=9 Identities=22% Similarity=-0.093 Sum_probs=3.9
Q ss_pred hhcHHHHHH
Q 023518 83 LEEYETAKV 91 (281)
Q Consensus 83 ~g~~~~A~~ 91 (281)
+++.++|..
T Consensus 187 ln~~~~Ac~ 195 (248)
T 3uzd_A 187 QNAPEQACH 195 (248)
T ss_dssp SCCHHHHHH
T ss_pred cCCHHHHHH
Confidence 344444443
No 377
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=24.25 E-value=2.1e+02 Score=25.90 Aligned_cols=62 Identities=23% Similarity=0.038 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHc-------------------------cCHHHHHHHHHHHHHcCCCc---------HHHHHHHHHHHH
Q 023518 36 AELFADRAQASIKL-------------------------QNFTEAVADANRAIELEPSM---------SKAYWRKATACM 81 (281)
Q Consensus 36 ~~~~~~~a~~~~~l-------------------------~~~~~A~~~~~~al~l~p~~---------~~a~~~~g~~~~ 81 (281)
+++++.||.+|+.+ .-|+..+.+++.|+..-|.. ..++..++.+|+
T Consensus 120 aEa~flRA~~Yf~L~~~~G~VP~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~Lp~~~~~~gr~tk~aA~allarvyL 199 (499)
T 3jys_A 120 AQARFNRAFAYYVLMDMFALPPFITEKNYSIEPAPLSREDLFNWIEAELNEIKPNLPSPRSEYGVADQAVASALLARMYL 199 (499)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCBCCCTTSCCSSCCBCCHHHHHHHHHHHHHHHGGGSCCTTSSTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCceecccCCCCCCCcCCHHHHHHHHHHHHHHHHHhCCCCCCCCCCcCHHHHHHHHHHHHH
Q ss_pred ------HhhcHHHHHHHHHHhh
Q 023518 82 ------KLEEYETAKVALEKGA 97 (281)
Q Consensus 82 ------~~g~~~~A~~~~~~a~ 97 (281)
..++|++|..+.++++
T Consensus 200 ~~~~y~~~~~~~~A~~~a~~vi 221 (499)
T 3jys_A 200 NAEIYTGKARYTECINACNEVI 221 (499)
T ss_dssp THHHHHSSCCHHHHHHHHHHHH
T ss_pred hhhhccChhHHHHHHHHHHHHH
No 378
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=24.21 E-value=2.3e+02 Score=23.52 Aligned_cols=13 Identities=23% Similarity=0.028 Sum_probs=6.0
Q ss_pred cCHHHHHHHHHHH
Q 023518 50 QNFTEAVADANRA 62 (281)
Q Consensus 50 ~~~~~A~~~~~~a 62 (281)
++.++|+..+++|
T Consensus 213 n~p~~Ac~LAk~A 225 (261)
T 3ubw_A 213 NSPDRACRLAKAA 225 (261)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 4444444444443
No 379
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=24.19 E-value=1.7e+02 Score=27.82 Aligned_cols=25 Identities=12% Similarity=0.053 Sum_probs=18.3
Q ss_pred HHHHHhhcHHHHHHHHHHhhhcCCCC
Q 023518 78 TACMKLEEYETAKVALEKGASLAPGD 103 (281)
Q Consensus 78 ~~~~~~g~~~~A~~~~~~a~~~~p~~ 103 (281)
.-+++.|+|+.|+..+++. .+-|-+
T Consensus 546 ~~~~~~g~~~~AL~~i~~L-~llPl~ 570 (661)
T 2qx5_A 546 RELYFNKQWQETLSQMELL-DLLPFS 570 (661)
T ss_dssp HHHHHTTCHHHHHHHHHHT-SCSCC-
T ss_pred HHHHHcCCHHHHHHHHHhC-CCCCCC
Confidence 3348899999999999884 455654
No 380
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=24.06 E-value=2.9e+02 Score=22.40 Aligned_cols=50 Identities=8% Similarity=-0.075 Sum_probs=27.9
Q ss_pred hcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q 023518 15 DDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIK-LQNFTEAVADANRAIE 64 (281)
Q Consensus 15 ~~~y~~Al~~y~~al~~--------~p~~~~~~~~~a~~~~~-l~~~~~A~~~~~~al~ 64 (281)
.|+-+.|...|..|++. +|-...+.++.+..|+. +++.++|...+++|+.
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 44455666666666553 22223455555555554 4667777776666654
No 381
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=23.41 E-value=1.4e+02 Score=27.01 Aligned_cols=30 Identities=17% Similarity=-0.010 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023518 69 MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 69 ~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
..-.|..+|..+++.++|.+|+.++..+-.
T Consensus 317 HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 317 HIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp CSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 345777889999999999999999987654
No 382
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=23.11 E-value=1.6e+02 Score=26.36 Aligned_cols=48 Identities=17% Similarity=0.068 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHcCC-------------CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023518 52 FTEAVADANRAIELEP-------------SMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p-------------~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~ 99 (281)
|+..+.+++.|+.+-+ .-..++-.+|.+|+.+++|++|..+.+.++..
T Consensus 160 y~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 160 YQQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 4556777777765322 23458888999999999999999999999864
No 383
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=22.70 E-value=3.3e+02 Score=28.36 Aligned_cols=67 Identities=18% Similarity=0.104 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHcc----CHHHHHHHHH----HHHH-cCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCC
Q 023518 36 AELFADRAQASIKLQ----NFTEAVADAN----RAIE-LEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~----~~~~A~~~~~----~al~-l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~~~p~ 102 (281)
.++++++|.++.++. ..++.+..++ ..++ .+..+.++........+.+++|..|++++.+.++-.+.
T Consensus 1241 ~~al~~k~~ala~~~~~~~~~~~~~~~~~~~~~el~k~~d~~d~k~~~~~~~~~~~~~~~g~~~k~l~k~~~~k~~ 1316 (1354)
T 3lxu_X 1241 IEALSKKGIAVAKLAVLDDCIKDSLAEINELYTEIIKFVDANDSKAIQFALWHAYAHGHYGRMYKYVVKLIEEKRT 1316 (1354)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSGGGHHHHHHHHHHHTTSSCTTSTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHhhcccCCceeehhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 456777666665542 1112222333 3333 34556666665556666789999999999999887763
No 384
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=21.97 E-value=1.5e+02 Score=18.22 Aligned_cols=26 Identities=27% Similarity=0.227 Sum_probs=13.7
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHh
Q 023518 5 LEKKAKEAFIDDYFELAYDLYSQAIE 30 (281)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~al~ 30 (281)
+-..|..+..-.|...|++.++++|+
T Consensus 23 ~aK~AiSAL~feDv~tA~~~L~~AL~ 48 (53)
T 2rkl_A 23 LAKYAISALNYEDLPTAKDELTKALD 48 (53)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcccccHHHHHHHHHHHHH
Confidence 33344445555555566665555554
No 385
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=21.93 E-value=2.5e+02 Score=22.95 Aligned_cols=15 Identities=20% Similarity=0.164 Sum_probs=7.5
Q ss_pred ccCHHHHHHHHHHHH
Q 023518 49 LQNFTEAVADANRAI 63 (281)
Q Consensus 49 l~~~~~A~~~~~~al 63 (281)
+++.++|...+++|+
T Consensus 189 ln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 189 ANSPEEAISLAKTTF 203 (236)
T ss_dssp SSCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 355555555444443
No 386
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=21.92 E-value=1.8e+02 Score=19.84 Aligned_cols=42 Identities=5% Similarity=-0.042 Sum_probs=30.8
Q ss_pred ceeeeccccccccccCcceEEEeCcEEEEEEeecCCCCCCccc
Q 023518 218 EAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLE 260 (281)
Q Consensus 218 ~~~~~~~~L~~~I~~~~s~~~v~~~kiei~L~K~~~~~W~~l~ 260 (281)
..|.+.++|.+ +.+++-...+.++.|.|.=++.....|...|
T Consensus 16 ~~~~v~~~lPG-~~~edi~v~~~~~~L~I~g~~~~~~~~~~~e 57 (102)
T 4fei_A 16 THLDLLLDVPG-VDAGTLALAEDGGQLTVSGERPGTEHLLRSE 57 (102)
T ss_dssp TEEEEEEECTT-CCGGGCEEEEETTEEEEEEEECCCSSCSSCC
T ss_pred CEEEEEEECCC-CchHhEEEEEECCEEEEEEEEecCCCEEEEE
Confidence 35777777754 5777778888898899988886666676544
No 387
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=21.91 E-value=2.4e+02 Score=20.62 Aligned_cols=52 Identities=10% Similarity=0.137 Sum_probs=24.0
Q ss_pred HHHHHhcCHHHHHHHHHHH---HhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 023518 10 KEAFIDDYFELAYDLYSQA---IEISPNSAELFADRAQASIKLQNFTEAVADANRAIE 64 (281)
Q Consensus 10 ~~~~~~~~y~~Al~~y~~a---l~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~ 64 (281)
..+|..+|.+..+..+... ++..|... ...+....--.+..+|.+++++..+
T Consensus 48 rlyf~~~n~~~m~~~L~pLh~~l~~~PeT~---~E~sF~~~fG~~L~~A~~~~~~y~~ 102 (126)
T 2npu_A 48 RLYFGERNVKGMFEVLEPLHAMMERGPQTL---KETSFNQAYGRDLMEAQEWCRKYMK 102 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSCCCH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccCHHHHHHHHHHHHHHHccCCCCH---HHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3444666666666666554 33344432 1122222222345555555555543
No 388
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=21.90 E-value=2.6e+02 Score=21.07 Aligned_cols=49 Identities=14% Similarity=0.070 Sum_probs=37.7
Q ss_pred HHHHHHHHHhc--CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc
Q 023518 21 AYDLYSQAIEI--SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM 69 (281)
Q Consensus 21 Al~~y~~al~~--~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~ 69 (281)
+...|.-.... .-..+.+|...|..+...|++.+|...|+.+++.+..-
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P 134 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEP 134 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 45555554443 33457889999999999999999999999999987543
No 389
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=21.36 E-value=2.8e+02 Score=21.20 Aligned_cols=63 Identities=16% Similarity=0.114 Sum_probs=0.0
Q ss_pred HHHHHHHHHhc--CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023518 21 AYDLYSQAIEI--SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 21 Al~~y~~al~~--~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
+..+|...... .-..+.+|...|..+...|+|.+|...|..++.....-..-+-..-..+...
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~~~L~~~~~~F~~R 143 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLERLQSQHRQFQAR 143 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
No 390
>3iv0_A SUSD homolog; NP_809186.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.13 E-value=2.9e+02 Score=24.79 Aligned_cols=62 Identities=15% Similarity=0.026 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHc-------------------------cCHHHHHHHHHHHHHc------CCC-------------cHH
Q 023518 36 AELFADRAQASIKL-------------------------QNFTEAVADANRAIEL------EPS-------------MSK 71 (281)
Q Consensus 36 ~~~~~~~a~~~~~l-------------------------~~~~~A~~~~~~al~l------~p~-------------~~~ 71 (281)
+++++.||.+|+.+ .-|+..+.+++.|+.. -|. -..
T Consensus 125 gEa~flRA~~yf~L~~~~G~VP~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~~~~~~~Lp~~~~~~~~~~gR~tk~a 204 (481)
T 3iv0_A 125 AEAIFMRSLSYFFIVRAFGDVPYYTNAYNEAPLPRTNMVIVLQNCLADLQPLLDDDPGAEVLPWSYSSYSSKGIRASRGS 204 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHSSEECCCCC----CCCEECHHHHHHHHHHHHHHHHHTCTTSCSSCSCCSSTTTTTTSCCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCeeEEcccccccCCCCCCHHHHHHHHHHHHHHHHhcccccccCCCccccCcccCCccCHHH
Confidence 57788888888886 1266678889999886 331 134
Q ss_pred HHHHHHHHHHHhhc---------HHHHHHHHHHhh
Q 023518 72 AYWRKATACMKLEE---------YETAKVALEKGA 97 (281)
Q Consensus 72 a~~~~g~~~~~~g~---------~~~A~~~~~~a~ 97 (281)
++..+|.+|+..+. |++|..+.+.++
T Consensus 205 A~allarvyL~~~~~~~~~~~~~~~~a~~~a~~vi 239 (481)
T 3iv0_A 205 VIALMMHINLWLVQFDAQNKEQYYRNVVSLGEELE 239 (481)
T ss_dssp HHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHH
Confidence 66677877776654 788888888776
No 391
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=20.85 E-value=7.3e+02 Score=25.88 Aligned_cols=84 Identities=13% Similarity=0.066 Sum_probs=49.1
Q ss_pred hhHHHHHHHHHHHhc--------CHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHH
Q 023518 2 ATDLEKKAKEAFIDD--------YFELAYDLYSQAIEI-SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKA 72 (281)
Q Consensus 2 a~~l~~~g~~~~~~~--------~y~~Al~~y~~al~~-~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a 72 (281)
+++|..+|.++.... ..++-.+.|.+.++- +.++..+......=...+++|..|+..+.++++-.+. -+.
T Consensus 1241 ~~al~~k~~ala~~~~~~~~~~~~~~~~~~~~~el~k~~d~~d~k~~~~~~~~~~~~~~~g~~~k~l~k~~~~k~~-~~~ 1319 (1354)
T 3lxu_X 1241 IEALSKKGIAVAKLAVLDDCIKDSLAEINELYTEIIKFVDANDSKAIQFALWHAYAHGHYGRMYKYVVKLIEEKRT-RDH 1319 (1354)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSGGGHHHHHHHHHHHTTSSCTTSTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHTCC-HHH
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHhhcccCCceeehhHHHHHHHHHHHHHHHHHHHHHHhcccc-HHH
Confidence 356667776665432 223334445555553 3344333222222222579999999999999988873 356
Q ss_pred HHHHHHHHHHhhcH
Q 023518 73 YWRKATACMKLEEY 86 (281)
Q Consensus 73 ~~~~g~~~~~~g~~ 86 (281)
+-.++.++..+|--
T Consensus 1320 ~~~~~~~~~~l~w~ 1333 (1354)
T 3lxu_X 1320 FVELAAINGALGHE 1333 (1354)
T ss_dssp HHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHcCCH
Confidence 66666666666643
No 392
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=20.64 E-value=3.2e+02 Score=21.67 Aligned_cols=53 Identities=11% Similarity=0.028 Sum_probs=43.2
Q ss_pred CHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc
Q 023518 17 YFELAYDLYSQAIEI--SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM 69 (281)
Q Consensus 17 ~y~~Al~~y~~al~~--~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~ 69 (281)
+..++...|.-.... .-..+.+|...|..+...|+|.+|...|+.++.....-
T Consensus 94 ~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P 148 (202)
T 3esl_A 94 NFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRP 148 (202)
T ss_dssp CHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred ccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 356777777776654 45568899999999999999999999999999977543
No 393
>3vtt_A Envelope protein E; immunoglobin like domain, epitope presentation, cellular ATT viral protein, structural protein; 1.70A {Dengue virus type 3} PDB: 4ala_C*
Probab=20.22 E-value=22 Score=25.33 Aligned_cols=14 Identities=14% Similarity=0.439 Sum_probs=11.3
Q ss_pred CCCCcccccCCCeE
Q 023518 172 PKYRHEFYQKPEEV 185 (281)
Q Consensus 172 ~k~r~~w~Qt~~~V 185 (281)
.+++|+|+|..+.|
T Consensus 92 ~~l~~~W~k~GSsI 105 (107)
T 3vtt_A 92 KALKINWYRKGSSI 105 (107)
T ss_dssp TCEEEEEEECCCC-
T ss_pred CceEEEEccCCCcC
Confidence 46899999998875
No 394
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=20.22 E-value=2.3e+02 Score=25.68 Aligned_cols=30 Identities=7% Similarity=0.258 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Q 023518 36 AELFADRAQASIKLQNFTEAVADANRAIEL 65 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l 65 (281)
..++..+|.+|+-.++|++|...++.++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467888999999999999999999999964
Done!