Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>023520
MEGDTGTDTLYLQLHKLSAINSEQALDNILTTLWSTRKTGLRSAEKSHVQSLLNLPSPGQ
VDPVVASLRSLIRKCVRENFTSDDLLKLFPPDLSLDLQSNLILLLQKHQKQWKEESSREQ
PLSGTSVSYHVKMSAAPSFRPFLSSVIATPLWPHQDDPFTNFNHNDLGASASVIADTNVA
PLAPMPLLRDGSPPGNMGSLPCLKSMTWTMEKSNSEPGNRVAVISLKLQDYTKSPSGETE
VKFQLTKDTLEAMLRSLTYINEQLSSLAATSSGPAQKKQKQ

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023520
        (281 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2059304 - symbol:FRS3 "FAR1-related sequence 3...   351  5.3e-31   1


>TAIR|locus:2059304 [details] [associations]
            symbol:FRS3 "FAR1-related sequence 3" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
            to red or far red light" evidence=ISS] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
            [GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
            InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
            SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0009506
            GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
            GO:GO:0008270 EMBL:AC005623 InterPro:IPR018289 Pfam:PF10551
            EMBL:AY057491 EMBL:BT002690 IPI:IPI00526037 IPI:IPI00657216
            PIR:H84668 RefSeq:NP_001031428.1 RefSeq:NP_565636.1
            RefSeq:NP_850098.1 UniGene:At.22269 IntAct:Q9ZVC9 PaxDb:Q9ZVC9
            PRIDE:Q9ZVC9 EnsemblPlants:AT2G27110.1 EnsemblPlants:AT2G27110.2
            GeneID:817253 KEGG:ath:AT2G27110 TAIR:At2g27110 eggNOG:NOG302035
            HOGENOM:HOG000241939 InParanoid:Q9ZVC9 OMA:LWPRQDE PhylomeDB:Q9ZVC9
            ProtClustDB:CLSN2688464 Genevestigator:Q9ZVC9 Uniprot:Q9ZVC9
        Length = 851

 Score = 351 (128.6 bits), Expect = 5.3e-31, P = 5.3e-31
 Identities = 72/127 (56%), Positives = 89/127 (70%)

Query:   143 LSSVIATPL-WPHQDDPFTNFNHNDLGASASVIADTNVAPLAPMPLLRDGSPPGNMGSLP 201
             LS+   TPL WP QD+    FN ND GA A  ++D N+  +AP+ L RD + P NM +LP
Sbjct:   663 LSAADTTPLLWPRQDEMIRRFNLNDGGARAQSVSDLNLPRMAPVSLHRDDTAPENMVALP 722

Query:   202 CLKSMTWTMEKSNSEPGNRVAVISLKLQDYTKSPSGETEVKFQLTKDTLEAMLRSLTYIN 261
             CLKS+TW ME  N+ PG RVAVI+LKL DY K PS + +VKFQL+  TLE MLRS+ YI+
Sbjct:   723 CLKSLTWGMESKNTMPGGRVAVINLKLHDYRKFPSADMDVKFQLSSVTLEPMLRSMAYIS 782

Query:   262 EQLSSLA 268
             EQLSS A
Sbjct:   783 EQLSSPA 789

 Score = 196 (74.1 bits), Expect = 2.2e-14, P = 2.2e-14
 Identities = 43/81 (53%), Positives = 60/81 (74%)

Query:   201 PCLKSMTWTMEKSNSEPGNRVAVISLKLQDYTKSPSGETEVKFQLTKDTLEAMLRSLTYI 260
             P L+SM +  E+ +S P NRVAVI+LKLQD T++ +GE+EVKFQ+++DTL AMLRS+ YI
Sbjct:   773 PMLRSMAYISEQLSS-PANRVAVINLKLQD-TETTTGESEVKFQVSRDTLGAMLRSMAYI 830

Query:   261 NEQLSSLAATSSGPAQKKQKQ 281
              EQLS +    +    KKQ++
Sbjct:   831 REQLSIVGELQTESQAKKQRK 851


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.126   0.363    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      281       266   0.00094  114 3  11 23  0.41    34
                                                     32  0.39    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  194 KB (2110 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.06u 0.15s 22.21t   Elapsed:  00:00:01
  Total cpu time:  22.06u 0.15s 22.21t   Elapsed:  00:00:01
  Start:  Fri May 10 06:27:34 2013   End:  Fri May 10 06:27:35 2013

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