Your job contains 1 sequence.
>023523
MATSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVIIDRTSAPK
QPAPGGPITPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIQTPLPGSTPLPGSTPLPG
STPLPGTADNSTYNIPTGSSDYPTPASDSGGNTEAKSGNGRPSSYMPPPPSPWMNPRPPL
SVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGD
AMSEIFELEVRFLSPLLIYALLYFSKSSHQMDAGAVDCFSE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023523
(281 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024977 - symbol:AT1G07480 "AT1G07480" species... 279 2.6e-49 2
TAIR|locus:2025027 - symbol:AT1G07470 "AT1G07470" species... 277 4.2e-49 2
TAIR|locus:2168464 - symbol:AT5G59230 species:3702 "Arabi... 122 1.0e-09 2
UNIPROTKB|G4MXK1 - symbol:MGG_01235 "Uncharacterized prot... 123 2.1e-05 1
CGD|CAL0003530 - symbol:orf19.2682 species:5476 "Candida ... 116 6.9e-05 1
RGD|69246 - symbol:Gtf2a1 "general transcription factor I... 108 0.00022 2
MGI|MGI:1933277 - symbol:Gtf2a1 "general transcription fa... 108 0.00022 2
UNIPROTKB|P52655 - symbol:GTF2A1 "Transcription initiatio... 108 0.00071 2
POMBASE|SPBC28F2.09 - symbol:toa1 "transcription factor T... 109 0.00082 2
>TAIR|locus:2024977 [details] [associations]
symbol:AT1G07480 "AT1G07480" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=ISS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR004855 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR013028 Pfam:PF03153 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006367 eggNOG:COG5149
GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396
KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694 HSSP:P32773
EMBL:AY463627 EMBL:AK316911 EMBL:AB493439 EMBL:AJ223635
IPI:IPI00542934 PIR:T51333 RefSeq:NP_172228.3 RefSeq:NP_850937.1
UniGene:At.20059 UniGene:At.48163 UniGene:At.72731
ProteinModelPortal:O49349 SMR:O49349 STRING:O49349 PRIDE:O49349
EnsemblPlants:AT1G07480.1 EnsemblPlants:AT1G07480.2 GeneID:837262
KEGG:ath:AT1G07480 TAIR:At1g07480 HOGENOM:HOG000241323
InParanoid:O49349 OMA:DSSGHYQ PhylomeDB:O49349
ProtClustDB:CLSN2687717 Genevestigator:O49349 Uniprot:O49349
Length = 375
Score = 279 (103.3 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 71/160 (44%), Positives = 93/160 (58%)
Query: 128 ADNST-YNIPTGSSDYPTPASDSGGNTEAKSGNGRXXXXXXXXXXXXXXXXXXXXVDVNV 186
ADNS+ YNIPTGSSDYPTP +++G N + K+ +DVNV
Sbjct: 112 ADNSSMYNIPTGSSDYPTPGTENGVNIDVKA--------RPSPYMPPPSPWTNPRLDVNV 163
Query: 187 AYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEI- 245
AYV+GRDE +RG S+Q TQD F S+GKRKR+D Y NGG +IPQQDGAGDA+ E
Sbjct: 164 AYVDGRDEPERGNSNQQFTQDLFVPSSGKRKRDDSSGHYQNGG-SIPQQDGAGDAIPEAN 222
Query: 246 FELEVRFLSPLLIYALL--YFSKSSH--QMDAGAVDCFSE 281
FE + ++ + + +FS SS Q+D D + E
Sbjct: 223 FECDAFRITSIGDRKVPRDFFSSSSKIPQVDGPMPDPYDE 262
Score = 252 (93.8 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 53/78 (67%), Positives = 64/78 (82%)
Query: 3 TSATGMVYIRVIEDVISKVRDEFVNNG-PGESVLNELQGIWEMKMIQAGVI---IDRTSA 58
T+ T VYI VIEDV++KVR+EF+NNG PGESVL+ELQGIWE KM+QAGV+ I+R+SA
Sbjct: 4 TTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSA 63
Query: 59 PKQPAPGGPITPVHDLNV 76
K P PGGP+T HDLNV
Sbjct: 64 QK-PTPGGPLT--HDLNV 78
>TAIR|locus:2025027 [details] [associations]
symbol:AT1G07470 "AT1G07470" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=ISS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR004855 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR013028 Pfam:PF03153 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003743 GO:GO:0006367 GO:GO:0005672
Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396 KO:K03122
Gene3D:1.10.287.100 PANTHER:PTHR12694 HSSP:P32773 UniGene:At.20059
UniGene:At.48163 HOGENOM:HOG000241323 ProtClustDB:CLSN2687717
EMBL:AY039987 EMBL:AY049254 EMBL:AF424559 EMBL:AY085902
EMBL:AY133802 EMBL:AY463597 IPI:IPI00539823 RefSeq:NP_563790.1
UniGene:At.67184 UniGene:At.75320 ProteinModelPortal:Q93VP4
SMR:Q93VP4 STRING:Q93VP4 PRIDE:Q93VP4 EnsemblPlants:AT1G07470.1
GeneID:837259 KEGG:ath:AT1G07470 TAIR:At1g07470 InParanoid:Q93VP4
OMA:SYQGPNE PhylomeDB:Q93VP4 ArrayExpress:Q93VP4
Genevestigator:Q93VP4 Uniprot:Q93VP4
Length = 375
Score = 277 (102.6 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 72/160 (45%), Positives = 91/160 (56%)
Query: 128 ADNST-YNIPTGSSDYPTPASDSGGNTEAKSGNGRXXXXXXXXXXXXXXXXXXXXVDVNV 186
ADNS+ YNIPTGSSDYPTP +++G N + K+ +DVNV
Sbjct: 112 ADNSSMYNIPTGSSDYPTPGTENGVNIDVKA--------RPSPYMPPPSPWTNPRLDVNV 163
Query: 187 AYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEI- 245
AYV+GRDE +RG S+Q TQD F S+GKRKR+D A Y NGG +IPQQDGA DA+ E
Sbjct: 164 AYVDGRDEPERGNSNQQFTQDLFVPSSGKRKRDDSSAHYQNGG-SIPQQDGASDAIPEAN 222
Query: 246 FE---LEVRFLSPLLIYALLYFSKSS-HQMDAGAVDCFSE 281
FE L + ++ I L S S Q+D D + E
Sbjct: 223 FECAALRITYVGDRKIPRDLIGSSSKIPQVDGPMPDPYDE 262
Score = 252 (93.8 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 53/78 (67%), Positives = 64/78 (82%)
Query: 3 TSATGMVYIRVIEDVISKVRDEFVNNG-PGESVLNELQGIWEMKMIQAGVI---IDRTSA 58
T+ T VYI VIEDV++KVR+EF+NNG PGESVL+ELQGIWE KM+QAGV+ I+R+SA
Sbjct: 4 TTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSA 63
Query: 59 PKQPAPGGPITPVHDLNV 76
K P PGGP+T HDLNV
Sbjct: 64 QK-PTPGGPLT--HDLNV 78
>TAIR|locus:2168464 [details] [associations]
symbol:AT5G59230 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005672 "transcription
factor TFIIA complex" evidence=IEA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR004855 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR013028 Pfam:PF03153 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006367 EMBL:AB016890
eggNOG:COG5149 GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784
SUPFAM:SSF47396 HSSP:P52655 KO:K03122 Gene3D:1.10.287.100
PANTHER:PTHR12694 EMBL:AY463598 IPI:IPI00548652 RefSeq:NP_200731.1
UniGene:At.29239 ProteinModelPortal:Q9FIF4 SMR:Q9FIF4 STRING:Q9FIF4
EnsemblPlants:AT5G59230.1 GeneID:836041 KEGG:ath:AT5G59230
TAIR:At5g59230 HOGENOM:HOG000152487 InParanoid:Q9FIF4 OMA:ECKFNAG
PhylomeDB:Q9FIF4 ProtClustDB:CLSN2914858 Genevestigator:Q9FIF4
Uniprot:Q9FIF4
Length = 186
Score = 122 (48.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 1 MATSATGMVYIRVIEDVISKVRDEFVNNGP-GESVLNELQGIWEMKMIQAGVIIDRTSAP 59
++TS T Y VI+DVI+K R + V NG ESVL+++Q +W+ KMIQAG +
Sbjct: 3 LSTSDTSSSYNYVIDDVINKSRCDLVYNGELDESVLSQIQSMWKTKMIQAGAMSGTIETS 62
Query: 60 KQPAPGGPI 68
P P+
Sbjct: 63 SASIPTTPV 71
Score = 57 (25.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 222 PAQYHNGGYNIPQQDGAGD-AMSEIFELE 249
P + +G Y IPQQDGA D A+ ++ E E
Sbjct: 92 PKKESDGFYYIPQQDGARDEAIVDVDENE 120
>UNIPROTKB|G4MXK1 [details] [associations]
symbol:MGG_01235 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR004855 InterPro:IPR009083
InterPro:IPR009088 InterPro:IPR013028 Pfam:PF03153 GO:GO:0043581
GO:GO:0006367 EMBL:CM001232 GO:GO:0005672 Gene3D:2.30.18.10
SUPFAM:SSF50784 SUPFAM:SSF47396 KO:K03122 Gene3D:1.10.287.100
PANTHER:PTHR12694 RefSeq:XP_003714139.1 ProteinModelPortal:G4MXK1
SMR:G4MXK1 EnsemblFungi:MGG_01235T0 GeneID:2679414
KEGG:mgr:MGG_01235 Uniprot:G4MXK1
Length = 407
Score = 123 (48.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 1 MATSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVIIDRTSAPK 60
M+ + G VY ++I+ V+ R +F +NG GES +NELQ +W+ K+ G S P
Sbjct: 1 MSNAVVGTVYEQIIKGVMEASRTDFEDNGFGESEINELQQVWQQKLTTMGA----ASFPW 56
Query: 61 QPAPGGPITP 70
P P P P
Sbjct: 57 DPKPDAPTPP 66
>CGD|CAL0003530 [details] [associations]
symbol:orf19.2682 species:5476 "Candida albicans" [GO:0005672
"transcription factor TFIIA complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0001129
"TBP-class protein binding RNA polymerase II transcription factor
activity involved in preinitiation complex assembly" evidence=IEA]
InterPro:IPR004855 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR013028 Pfam:PF03153 CGD:CAL0003530 GO:GO:0006367
EMBL:AACQ01000023 EMBL:AACQ01000025 eggNOG:COG5149 GO:GO:0005672
Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396 KO:K03122
Gene3D:1.10.287.100 PANTHER:PTHR12694 RefSeq:XP_720205.1
RefSeq:XP_720435.1 ProteinModelPortal:Q5AFC5 SMR:Q5AFC5
STRING:Q5AFC5 GeneID:3637926 GeneID:3638110 KEGG:cal:CaO19.10197
KEGG:cal:CaO19.2682 Uniprot:Q5AFC5
Length = 275
Score = 116 (45.9 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 1 MATSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGV 51
M+ + T +Y VIEDVI+ R +F NNG ES L EL+ IW K+ Q+GV
Sbjct: 1 MSNTETSKLYESVIEDVINDSRQDFENNGIDESTLQELRRIWCEKLTQSGV 51
>RGD|69246 [details] [associations]
symbol:Gtf2a1 "general transcription factor IIA, 1" species:10116
"Rattus norvegicus" [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005672 "transcription factor TFIIA complex" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017025 "TBP-class protein binding" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
InterPro:IPR004855 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR013028 Pfam:PF03153 RGD:69246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006367 GeneTree:ENSGT00530000063152
eggNOG:COG5149 GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784
SUPFAM:SSF47396 KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694
CTD:2957 HOGENOM:HOG000015236 HOVERGEN:HBG052771 OMA:HMSATGM
OrthoDB:EOG4TXBST EMBL:AF000943 IPI:IPI00197475 RefSeq:NP_071544.1
UniGene:Rn.44436 ProteinModelPortal:O08949 SMR:O08949 STRING:O08949
PhosphoSite:O08949 PRIDE:O08949 Ensembl:ENSRNOT00000005873
GeneID:83830 KEGG:rno:83830 UCSC:RGD:69246 InParanoid:O08949
NextBio:616464 ArrayExpress:O08949 Genevestigator:O08949
GermOnline:ENSRNOG00000004300 Uniprot:O08949
Length = 377
Score = 108 (43.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 3 TSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVI 52
T+ +Y VIEDVI+ VRD F+++G E VL EL+ +WE K++Q+ +
Sbjct: 7 TNTVPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAV 56
Score = 42 (19.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 212 SAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSE 244
+AG+++ + PAQ + Q DG GD SE
Sbjct: 253 AAGQQQPQAQPAQQQ--APLVLQVDGTGDTSSE 283
>MGI|MGI:1933277 [details] [associations]
symbol:Gtf2a1 "general transcription factor II A, 1"
species:10090 "Mus musculus" [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0003677
"DNA binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005672
"transcription factor TFIIA complex" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017025 "TBP-class protein binding" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
InterPro:IPR004855 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR013028 Pfam:PF03153 MGI:MGI:1933277 GO:GO:0005737
GO:GO:0006355 GO:GO:0006367 GeneTree:ENSGT00530000063152
eggNOG:COG5149 GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784
SUPFAM:SSF47396 KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694
CTD:2957 HOGENOM:HOG000015236 HOVERGEN:HBG052771 OMA:HMSATGM
OrthoDB:EOG4TXBST EMBL:AF250834 EMBL:AK048711 IPI:IPI00121198
RefSeq:NP_113568.2 RefSeq:NP_780544.1 UniGene:Mm.275728
UniGene:Mm.432242 ProteinModelPortal:Q99PM3 SMR:Q99PM3
MINT:MINT-1348159 STRING:Q99PM3 PhosphoSite:Q99PM3 PaxDb:Q99PM3
PRIDE:Q99PM3 Ensembl:ENSMUST00000021345 GeneID:83602 KEGG:mmu:83602
UCSC:uc007okr.2 InParanoid:Q99PM3 NextBio:350672 Bgee:Q99PM3
CleanEx:MM_GTF2A1 Genevestigator:Q99PM3
GermOnline:ENSMUSG00000020962 Uniprot:Q99PM3
Length = 378
Score = 108 (43.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 3 TSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVI 52
T+ +Y VIEDVI+ VRD F+++G E VL EL+ +WE K++Q+ +
Sbjct: 7 TNTVPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAV 56
Score = 42 (19.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 212 SAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSE 244
+AG+++ + PAQ + Q DG GD SE
Sbjct: 254 AAGQQQPQAQPAQQQ--APLVLQVDGTGDTSSE 284
>UNIPROTKB|P52655 [details] [associations]
symbol:GTF2A1 "Transcription initiation factor IIA subunit
1" species:9606 "Homo sapiens" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA;TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0005672 "transcription factor TFIIA complex" evidence=IDA]
[GO:0017025 "TBP-class protein binding" evidence=IPI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] Reactome:REACT_71
InterPro:IPR004855 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR013028 Pfam:PF03153 Reactome:REACT_116125 GO:GO:0016032
GO:GO:0006355 GO:GO:0003677 GO:GO:0003713 GO:GO:0006368
GO:GO:0006367 Reactome:REACT_1788 eggNOG:COG5149 GO:GO:0005672
Gene3D:2.30.18.10 SUPFAM:SSF50784 SUPFAM:SSF47396 PDB:1NVP
PDBsum:1NVP KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694
EMBL:X75383 EMBL:X77225 EMBL:D14887 EMBL:D14886 EMBL:AC010582
EMBL:BC107155 EMBL:BC107156 IPI:IPI00004350 IPI:IPI00401787
PIR:A49077 RefSeq:NP_056943.1 RefSeq:NP_963889.1 UniGene:Hs.592334
ProteinModelPortal:P52655 SMR:P52655 IntAct:P52655 STRING:P52655
PhosphoSite:P52655 DMDM:1711663 PRIDE:P52655 DNASU:2957
Ensembl:ENST00000434192 Ensembl:ENST00000553612 GeneID:2957
KEGG:hsa:2957 UCSC:uc001xvf.1 CTD:2957 GeneCards:GC14M081646
HGNC:HGNC:4646 HPA:HPA000869 MIM:600520 neXtProt:NX_P52655
PharmGKB:PA29033 HOGENOM:HOG000015236 HOVERGEN:HBG052771
InParanoid:P52655 OMA:HMSATGM OrthoDB:EOG4TXBST PhylomeDB:P52655
ChEMBL:CHEMBL4832 ChiTaRS:GTF2A1 EvolutionaryTrace:P52655
GenomeRNAi:2957 NextBio:11720 PMAP-CutDB:P52655 ArrayExpress:P52655
Bgee:P52655 Genevestigator:P52655 GermOnline:ENSG00000165417
Uniprot:P52655
Length = 376
Score = 108 (43.1 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 3 TSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVI 52
T+ +Y VIEDVI+ VRD F+++G E VL EL+ +WE K++Q+ +
Sbjct: 7 TNTVPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAV 56
Score = 37 (18.1 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 212 SAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSE 244
+ G+++ + PAQ + Q DG GD SE
Sbjct: 252 ATGQQQPQAQPAQTQ--APLVLQVDGTGDTSSE 282
>POMBASE|SPBC28F2.09 [details] [associations]
symbol:toa1 "transcription factor TFIIA complex large
subunit Toa1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005672 "transcription factor TFIIA complex" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISO]
InterPro:IPR004855 InterPro:IPR009083 InterPro:IPR009088
InterPro:IPR013028 Pfam:PF03153 PomBase:SPBC28F2.09 GO:GO:0005829
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006367 GO:GO:0000991
eggNOG:COG5149 GO:GO:0005672 Gene3D:2.30.18.10 SUPFAM:SSF50784
SUPFAM:SSF47396 KO:K03122 Gene3D:1.10.287.100 PANTHER:PTHR12694
OMA:QEMKQVW PIR:T40052 RefSeq:NP_595670.1 HSSP:P32773
ProteinModelPortal:Q9USU9 STRING:Q9USU9 EnsemblFungi:SPBC28F2.09.1
GeneID:2540632 KEGG:spo:SPBC28F2.09 OrthoDB:EOG4QG0PR
NextBio:20801757 Uniprot:Q9USU9
Length = 369
Score = 109 (43.4 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 28/75 (37%), Positives = 39/75 (52%)
Query: 1 MATSATGMVYIRVIEDVISKVRDEFVNNGPGESVLNELQGIWEMKMIQAGVIIDRTSAPK 60
M+ S G VY VI DVI+ R +F NG ++ L ELQ +W+ K++ V + P
Sbjct: 1 MSNSIVGEVYHHVILDVIANSRSDFEENGVDDATLRELQNLWQSKLVATDV----ATFPW 56
Query: 61 QPAPGG--PITPVHD 73
AP G PI + D
Sbjct: 57 AQAPVGTFPIGQLFD 71
Score = 35 (17.4 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 139 SSDYPTPASDSGGNTEAKSGNGR 161
+SD P SD TE S G+
Sbjct: 302 NSDLDDPDSDEAPETEEGSDIGQ 324
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.132 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 281 210 0.00080 112 3 11 23 0.43 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 586 (62 KB)
Total size of DFA: 162 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.51u 0.11s 16.62t Elapsed: 00:00:01
Total cpu time: 16.51u 0.11s 16.62t Elapsed: 00:00:01
Start: Fri May 10 06:36:25 2013 End: Fri May 10 06:36:26 2013