Query 023524
Match_columns 281
No_of_seqs 182 out of 723
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 04:42:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023524.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023524hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 3.1E-90 6.7E-95 659.2 24.6 269 12-281 10-279 (387)
2 PF13839 PC-Esterase: GDSL/SGN 100.0 1.2E-31 2.6E-36 240.6 14.6 157 108-281 1-169 (263)
3 PF14416 PMR5N: PMR5 N termina 99.9 8.7E-29 1.9E-33 175.6 4.5 54 54-107 2-55 (55)
4 cd01842 SGNH_hydrolase_like_5 98.1 1E-05 2.3E-10 70.6 6.9 102 125-277 2-103 (183)
5 cd01829 SGNH_hydrolase_peri2 S 92.6 0.55 1.2E-05 40.1 7.6 63 206-278 58-120 (200)
6 cd01834 SGNH_hydrolase_like_2 91.5 1.2 2.7E-05 37.1 8.4 54 207-276 61-114 (191)
7 COG2845 Uncharacterized protei 90.5 1.2 2.6E-05 42.7 7.8 122 121-277 115-237 (354)
8 cd01838 Isoamyl_acetate_hydrol 85.7 1.5 3.3E-05 36.9 4.9 56 207-277 63-118 (199)
9 cd01830 XynE_like SGNH_hydrola 82.0 5.4 0.00012 34.4 7.0 58 206-277 73-130 (204)
10 cd01841 NnaC_like NnaC (CMP-Ne 63.2 3.5 7.6E-05 34.3 1.0 53 206-278 50-102 (174)
11 PF00185 OTCace: Aspartate/orn 50.1 14 0.00029 31.4 2.5 25 121-146 1-25 (158)
12 cd01825 SGNH_hydrolase_peri1 S 48.7 8 0.00017 32.3 0.9 32 244-277 76-107 (189)
13 cd01835 SGNH_hydrolase_like_3 46.5 10 0.00022 32.1 1.2 54 206-276 68-121 (193)
14 PF03808 Glyco_tran_WecB: Glyc 46.1 39 0.00086 28.9 4.8 44 104-149 23-73 (172)
15 cd01844 SGNH_hydrolase_like_6 43.5 12 0.00026 31.5 1.1 29 246-276 75-103 (177)
16 cd01820 PAF_acetylesterase_lik 42.5 10 0.00022 33.0 0.6 52 207-278 89-140 (214)
17 cd01832 SGNH_hydrolase_like_1 41.1 12 0.00026 31.3 0.7 49 207-276 67-115 (185)
18 cd01822 Lysophospholipase_L1_l 38.9 16 0.00034 30.2 1.1 51 206-278 63-114 (177)
19 cd01831 Endoglucanase_E_like E 38.3 16 0.00035 30.4 1.1 48 208-273 56-103 (169)
20 PF07172 GRP: Glycine rich pro 38.2 30 0.00065 27.2 2.6 21 1-21 1-21 (95)
21 PRK10528 multifunctional acyl- 37.8 19 0.0004 31.0 1.5 15 122-136 10-24 (191)
22 PF09949 DUF2183: Uncharacteri 37.2 29 0.00062 27.5 2.3 22 114-135 56-77 (100)
23 PRK14805 ornithine carbamoyltr 37.1 25 0.00054 33.2 2.3 25 120-146 145-169 (302)
24 PF12026 DUF3513: Domain of un 36.3 2 4.3E-05 38.7 -4.9 17 120-136 132-148 (210)
25 cd01839 SGNH_arylesterase_like 32.8 22 0.00049 30.5 1.2 55 206-276 78-135 (208)
26 PRK04284 ornithine carbamoyltr 30.1 42 0.00092 32.1 2.7 26 120-146 153-178 (332)
27 cd04501 SGNH_hydrolase_like_4 29.7 26 0.00057 29.2 1.1 48 207-276 59-106 (183)
28 cd01827 sialate_O-acetylestera 29.2 1.5E+02 0.0032 24.6 5.6 54 207-278 67-120 (188)
29 COG0180 TrpS Tryptophanyl-tRNA 27.9 60 0.0013 31.1 3.2 36 245-280 59-95 (314)
30 PRK11877 psaI photosystem I re 26.9 67 0.0015 21.2 2.4 20 3-22 12-36 (38)
31 cd06533 Glyco_transf_WecG_TagA 26.1 1.3E+02 0.0029 25.5 4.9 40 108-149 26-71 (171)
32 PRK02102 ornithine carbamoyltr 25.2 61 0.0013 31.1 2.8 26 120-146 153-178 (331)
33 cd01821 Rhamnogalacturan_acety 24.9 39 0.00084 28.7 1.3 55 205-276 63-117 (198)
34 PLN02342 ornithine carbamoyltr 24.7 62 0.0013 31.3 2.7 25 120-146 192-216 (348)
35 TIGR03052 PS_I_psaI photosyste 24.6 58 0.0013 20.6 1.7 20 3-22 5-29 (31)
36 PRK10113 cell division modulat 24.5 38 0.00082 25.3 0.9 16 119-134 38-55 (80)
37 PLN02527 aspartate carbamoyltr 23.8 67 0.0014 30.4 2.7 26 120-145 149-174 (306)
38 cd01840 SGNH_hydrolase_yrhL_li 23.2 38 0.00082 27.8 0.9 15 125-139 2-16 (150)
39 PRK03515 ornithine carbamoyltr 23.0 65 0.0014 31.0 2.6 26 120-146 154-179 (336)
40 COG0078 ArgF Ornithine carbamo 23.0 63 0.0014 30.9 2.4 21 120-142 151-171 (310)
41 PRK00856 pyrB aspartate carbam 22.5 72 0.0015 30.2 2.7 27 120-146 154-180 (305)
42 PF13289 SIR2_2: SIR2-like dom 22.4 1.6E+02 0.0035 23.2 4.4 32 115-146 79-110 (143)
43 PF00702 Hydrolase: haloacid d 22.2 68 0.0015 27.0 2.3 19 114-132 185-205 (215)
44 TIGR01489 DKMTPPase-SF 2,3-dik 21.8 94 0.002 25.6 3.0 12 122-133 162-173 (188)
45 CHL00186 psaI photosystem I su 21.7 94 0.002 20.3 2.3 20 3-22 8-32 (36)
46 PRK01713 ornithine carbamoyltr 21.3 79 0.0017 30.3 2.7 26 120-146 154-179 (334)
47 PF01861 DUF43: Protein of unk 21.0 47 0.001 30.6 1.1 12 120-131 43-54 (243)
48 cd04506 SGNH_hydrolase_YpmR_li 20.4 50 0.0011 28.1 1.0 29 244-274 101-129 (204)
49 PRK08192 aspartate carbamoyltr 20.2 83 0.0018 30.2 2.6 26 120-145 157-182 (338)
50 TIGR01728 SsuA_fam ABC transpo 20.1 2.1E+02 0.0046 25.0 5.2 23 118-140 97-119 (288)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=3.1e-90 Score=659.18 Aligned_cols=269 Identities=79% Similarity=1.394 Sum_probs=249.9
Q ss_pred HHHHHHHhhccccccccceeeeeccccCCCCCCCCccccCCCCCCCccccceeeCCCCCCCCCCCCC-CCCCCCCccCCC
Q 023524 12 FLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPMYQSPECP-IIDSEFNCQMNG 90 (281)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cd~~~G~WV~d~~~PlY~~~~Cp-~i~~~~~C~~nG 90 (281)
|..|++|++++.+.++||.|+.++..+..+.. ..+..+.++++||+|+|+||+|+++|+|++++|| ||++++||++||
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knG 88 (387)
T PLN02629 10 FSFLFFLVLLQPEIASSALILSLKNHHNHHSN-RRPSLQANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYG 88 (387)
T ss_pred HHHHHHHhhhccchhhhhhhhhhhcccccccC-CCCCCCCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcC
Confidence 33445888899999999999999988665433 4456778889999999999999999999999999 999999999999
Q ss_pred CCCCcccccccccCccCCCCCChHHHHHHhcCCeEEEEeccchhHHHHHHHHHhhhcCCCCceeeeeCCCceEEEEeecc
Q 023524 91 RPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYG 170 (281)
Q Consensus 91 RpD~~yl~wrWqP~~C~LprFd~~~fL~~lrgK~i~FVGDSl~Rnq~~SLlclL~~~~~~~~~~~~~~~~~~~~~f~~~n 170 (281)
|||++|++|||||++|+||||||.+||++|||||||||||||+|||||||+|||++++|+.++...++++..+|+|++||
T Consensus 89 RPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN 168 (387)
T PLN02629 89 RPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYG 168 (387)
T ss_pred CCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEeccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCC
Confidence 99999999999999999999999999999999999999999999999999999999998766666677888999999999
Q ss_pred eEEEEEEcccceeeecccceeeEEeccCCcccCCCCCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHH
Q 023524 171 ISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKG 250 (281)
Q Consensus 171 ~tv~f~WsPfLv~~~~~~~~~~l~lD~id~~a~~w~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~Ayrka 250 (281)
+||+||||||||+.+..++.++|+||+||+.++.|+++|||||||||||.+.+..++++|++.|+.++++|++.+||++|
T Consensus 169 ~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~a 248 (387)
T PLN02629 169 VSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKA 248 (387)
T ss_pred EEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHH
Confidence 99999999999998877777889999999888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCceEEEEecCCCCCCC
Q 023524 251 LRTWANWVDNNIDRSKTRVFFQSISPTHYNK 281 (281)
Q Consensus 251 L~t~~~wi~~~l~~~kt~VffRT~SP~HFeg 281 (281)
|+||++||++++++.||+|||||+||+||||
T Consensus 249 l~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~ 279 (387)
T PLN02629 249 LRTWAYWVDTNVDRSRTRVFFQSISPTHYNP 279 (387)
T ss_pred HHHHHHHHHhcCCCCCcEEEEEecCcccccC
Confidence 9999999999999999999999999999995
No 2
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=99.97 E-value=1.2e-31 Score=240.61 Aligned_cols=157 Identities=35% Similarity=0.714 Sum_probs=127.4
Q ss_pred CCCCChHHHHHHhcCCeEEEEeccchhHHHHHHHHHhhhcCC-----CCceeeeeCCCceEEEEeecceEEEEEEcccce
Q 023524 108 LPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAP-----RTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLV 182 (281)
Q Consensus 108 LprFd~~~fL~~lrgK~i~FVGDSl~Rnq~~SLlclL~~~~~-----~~~~~~~~~~~~~~~~f~~~n~tv~f~WsPfLv 182 (281)
|++||+.++|++||||+|+|||||++||+|+||+|+|.+..+ +......+.+....+.|+++|+||+|+|+|||+
T Consensus 1 ~~~~d~~~cL~~lr~k~i~fiGDS~~Rq~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~l~ 80 (263)
T PF13839_consen 1 LPRFDARECLQRLRNKRIVFIGDSTTRQQYESLVCLLGPEVPSWQESPHSGIEFPNHRNFRYNFPDYNVTLSFYWDPFLV 80 (263)
T ss_pred CChhhHHHHHHHccCCEEEEEechhhHHHHHHHHHHHhccccccccccccccccccCCceEEeecCCCeEEEEecccccc
Confidence 689999999999999999999999999999999999998776 222222233466788899999999999999999
Q ss_pred eeecccceeeEEeccCC-cccCCCC----CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHH
Q 023524 183 DIDVVHGKRVLKLEDIS-GNGKSWL----NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANW 257 (281)
Q Consensus 183 ~~~~~~~~~~l~lD~id-~~a~~w~----~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~w 257 (281)
+. +|.++ ..+..|. .+||||+|+|+||.+.+....+ ++. .+++...+|+.++++++++
T Consensus 81 ~~----------l~~~~~~~~~~~~~~~~~pdvvV~nsG~W~~~~~~~~~~-----~~~--~~~~~~~~y~~~l~~~~~~ 143 (263)
T PF13839_consen 81 DQ----------LDSIDEEIANNWPTSGARPDVVVINSGLWYLRRSGFIEW-----GDN--KEINPLEAYRNRLRTLADW 143 (263)
T ss_pred cc----------ccccchhhhccccccccCCCEEEEEcchhhhhcchhccc-----CCC--cCcchHHHHHHHHHHHHHH
Confidence 64 44444 2245666 8999999999999976432222 222 6678899999999999999
Q ss_pred HHhhCCCCC--ceEEEEecCCCCCCC
Q 023524 258 VDNNIDRSK--TRVFFQSISPTHYNK 281 (281)
Q Consensus 258 i~~~l~~~k--t~VffRT~SP~HFeg 281 (281)
+.+.+++.+ ++||||+++|.||++
T Consensus 144 ~~~~~~~~~~~~~v~~r~~~P~h~~~ 169 (263)
T PF13839_consen 144 VRRLLDRSKPPTRVFWRTTSPVHFEG 169 (263)
T ss_pred HHhhhccccccceEEEEecCCccccc
Confidence 998776655 999999999999985
No 3
>PF14416 PMR5N: PMR5 N terminal Domain
Probab=99.95 E-value=8.7e-29 Score=175.57 Aligned_cols=54 Identities=59% Similarity=1.331 Sum_probs=52.8
Q ss_pred CCCCccccceeeCCCCCCCCCCCCCCCCCCCCccCCCCCCCcccccccccCccC
Q 023524 54 STCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQ 107 (281)
Q Consensus 54 ~~Cd~~~G~WV~d~~~PlY~~~~Cp~i~~~~~C~~nGRpD~~yl~wrWqP~~C~ 107 (281)
++||+|+|+||+|+++|+|++++||||++++||++|||||++|++|||||++|+
T Consensus 2 ~~Cd~~~G~WV~D~~~PlY~~~~Cp~i~~~~nC~~nGRpD~~y~~wRWqP~~Cd 55 (55)
T PF14416_consen 2 KRCDYFDGRWVPDPSYPLYTNSTCPFIDEGFNCQKNGRPDSDYLKWRWQPRGCD 55 (55)
T ss_pred CccCcccCEEEeCCCCCccCCCCCCcCCCccchhhcCCCCCccceeeecCCCCC
Confidence 689999999999999999999999999999999999999999999999999996
No 4
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.07 E-value=1e-05 Score=70.63 Aligned_cols=102 Identities=15% Similarity=0.310 Sum_probs=65.6
Q ss_pred EEEEeccchhHHHHHHHHHhhhcCCCCceeeeeCCCceEEEEeecceEEEEEEcccceeeecccceeeEEeccCCcccCC
Q 023524 125 VMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKS 204 (281)
Q Consensus 125 i~FVGDSl~Rnq~~SLlclL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~f~WsPfLv~~~~~~~~~~l~lD~id~~a~~ 204 (281)
++|+|||+.|-.|.-|+|+|....-=....+...+ ..+| +- . ..++ +.+
T Consensus 2 v~~lgds~~ravykdlv~l~q~~~~l~~~~lr~k~---e~~f--------------~~--------D-~ll~-----gg~ 50 (183)
T cd01842 2 VVILGDSIQRAVYKDLVLLLQKDSLLSSSQLKAKG---ELSF--------------EN--------D-VLLE-----GGR 50 (183)
T ss_pred EEEEccHHHHHHHHHHHHHhcCCccccHHHHhhhh---hhhh--------------cc--------c-eeec-----CCc
Confidence 78999999999999999999843110000000000 0011 00 0 1111 133
Q ss_pred CCCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 205 WLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 205 w~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
| ||||||+|.|=... |.. ...+.|++.|.+++.-+.+-+ |+++++||.|.+|-
T Consensus 51 ~---DVIi~Ns~LWDl~r--------y~~--------~~~~~Y~~NL~~Lf~rLk~~l-p~~allIW~tt~Pv 103 (183)
T cd01842 51 L---DLVIMNSCLWDLSR--------YQR--------NSMKTYRENLERLFSKLDSVL-PIECLIVWNTAMPV 103 (183)
T ss_pred e---eEEEEecceecccc--------cCC--------CCHHHHHHHHHHHHHHHHhhC-CCccEEEEecCCCC
Confidence 4 99999999997633 211 346899999999998776634 77899999999994
No 5
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=92.62 E-value=0.55 Score=40.10 Aligned_cols=63 Identities=11% Similarity=0.120 Sum_probs=37.9
Q ss_pred CCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCCC
Q 023524 206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTH 278 (281)
Q Consensus 206 ~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~H 278 (281)
..+|+||+..|.+=..... .+-.+.. ...-.+.++|+..|+.+++.+.+ ++.+|++-+..|.+
T Consensus 58 ~~pd~vii~~G~ND~~~~~-~~~~~~~-----~~~~~~~~~~~~~l~~lv~~~~~----~~~~vili~~pp~~ 120 (200)
T cd01829 58 EKPDVVVVFLGANDRQDIR-DGDGYLK-----FGSPEWEEEYRQRIDELLNVARA----KGVPVIWVGLPAMR 120 (200)
T ss_pred CCCCEEEEEecCCCCcccc-CCCceee-----cCChhHHHHHHHHHHHHHHHHHh----CCCcEEEEcCCCCC
Confidence 3689999999987542110 0000100 00113457888888888876643 35679998888764
No 6
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=91.52 E-value=1.2 Score=37.15 Aligned_cols=54 Identities=26% Similarity=0.270 Sum_probs=32.5
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCC
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISP 276 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP 276 (281)
.+|++++..|.-=...+ +. .....+.|+..|+++++.+.+ ..+.+.|++-+.-|
T Consensus 61 ~~d~v~l~~G~ND~~~~------~~--------~~~~~~~~~~~l~~~v~~~~~--~~~~~~ii~~~p~~ 114 (191)
T cd01834 61 KPDVVSIMFGINDSFRG------FD--------DPVGLEKFKTNLRRLIDRLKN--KESAPRIVLVSPIA 114 (191)
T ss_pred CCCEEEEEeecchHhhc------cc--------ccccHHHHHHHHHHHHHHHHc--ccCCCcEEEECCcc
Confidence 48999998885322110 00 112356888899998887753 23445677766433
No 7
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.50 E-value=1.2 Score=42.67 Aligned_cols=122 Identities=18% Similarity=0.165 Sum_probs=67.8
Q ss_pred cCCeEEEEeccchhHHHHHHHHHhhhcCCCCceeeeeCCCceEEEEeecceEEEEEEcccceeeecccceeeEEeccCCc
Q 023524 121 KGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISG 200 (281)
Q Consensus 121 rgK~i~FVGDSl~Rnq~~SLlclL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~f~WsPfLv~~~~~~~~~~l~lD~id~ 200 (281)
.+++|.|||||+++..-+.|..-|..... ... .++....+-+..+|| |-|.-=+. +.+++
T Consensus 115 ~a~kvLvvGDslm~gla~gl~~al~t~~~-i~i-~~~sn~SSGlvr~dY-----fdWpk~i~-------------~~l~~ 174 (354)
T COG2845 115 DADKVLVVGDSLMQGLAEGLDKALATSPG-ITI-VTRSNGSSGLVRDDY-----FDWPKAIP-------------ELLDK 174 (354)
T ss_pred CCCEEEEechHHhhhhHHHHHHHhccCCC-cEE-EEeecCCCCcccccc-----cccHHHHH-------------HHHHh
Confidence 48999999999999999998887764221 111 111111111221221 11211000 11222
Q ss_pred ccCCCCCccEEEEcCccccccCCcccceeeEeeCcee-eccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 201 NGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTY-YQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 201 ~a~~w~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~-~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
+ ..+.+||+..|. + .+|+++.++... ...-.+...|++=+...++.+. ..+-.|+|-++.|.
T Consensus 175 ~----~~~a~vVV~lGa----N---D~q~~~~gd~~~kf~S~~W~~eY~kRvd~~l~ia~----~~~~~V~WvGmP~~ 237 (354)
T COG2845 175 H----PKPAAVVVMLGA----N---DRQDFKVGDVYEKFRSDEWTKEYEKRVDAILKIAH----THKVPVLWVGMPPF 237 (354)
T ss_pred c----CCccEEEEEecC----C---CHHhcccCCeeeecCchHHHHHHHHHHHHHHHHhc----ccCCcEEEeeCCCc
Confidence 1 256777777774 1 245554444222 2334677899998888888653 35667999988774
No 8
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=85.67 E-value=1.5 Score=36.86 Aligned_cols=56 Identities=18% Similarity=0.166 Sum_probs=37.2
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
.+|+||+..|.-=... .+.. .. ...+.|+..++.+++.+.+. .++++|++-|..|.
T Consensus 63 ~pd~vii~~G~ND~~~----------~~~~--~~-~~~~~~~~~~~~~i~~~~~~--~~~~~ii~~t~~~~ 118 (199)
T cd01838 63 QPDLVTIFFGANDAAL----------PGQP--QH-VPLDEYKENLRKIVSHLKSL--SPKTKVILITPPPV 118 (199)
T ss_pred CceEEEEEecCccccC----------CCCC--Cc-ccHHHHHHHHHHHHHHHHhh--CCCCeEEEeCCCCC
Confidence 7999999999643211 0000 01 12568899999998877652 35678999988774
No 9
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=82.04 E-value=5.4 Score=34.44 Aligned_cols=58 Identities=12% Similarity=-0.013 Sum_probs=34.8
Q ss_pred CCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 206 ~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
..+|+||+..|.==... ...... ..-...+.|+..|+++++.+.++ ..+|++-|..|.
T Consensus 73 ~~p~~vii~~G~ND~~~---------~~~~~~-~~~~~~~~~~~~l~~ii~~~~~~----~~~vil~t~~P~ 130 (204)
T cd01830 73 PGVRTVIILEGVNDIGA---------SGTDFA-AAPVTAEELIAGYRQLIRRAHAR----GIKVIGATITPF 130 (204)
T ss_pred CCCCEEEEecccccccc---------cccccc-cCCCCHHHHHHHHHHHHHHHHHC----CCeEEEecCCCC
Confidence 46899999888521100 000000 01124567889999998876552 467899888885
No 10
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=63.23 E-value=3.5 Score=34.30 Aligned_cols=53 Identities=13% Similarity=0.036 Sum_probs=34.8
Q ss_pred CCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCCC
Q 023524 206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTH 278 (281)
Q Consensus 206 ~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~H 278 (281)
..+|+||+..|.==. .. + ...+.|++.++++++-+.++ .++++|++-+..|..
T Consensus 50 ~~pd~v~i~~G~ND~----------~~-~-------~~~~~~~~~~~~l~~~~~~~--~p~~~vi~~~~~p~~ 102 (174)
T cd01841 50 KNPSKVFLFLGTNDI----------GK-E-------VSSNQFIKWYRDIIEQIREE--FPNTKIYLLSVLPVL 102 (174)
T ss_pred cCCCEEEEEeccccC----------CC-C-------CCHHHHHHHHHHHHHHHHHH--CCCCEEEEEeeCCcC
Confidence 368999998884211 11 1 13457788888888877652 356788888888754
No 11
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=50.08 E-value=14 Score=31.41 Aligned_cols=25 Identities=32% Similarity=0.380 Sum_probs=21.0
Q ss_pred cCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 121 KGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 121 rgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
.|++|+|||| .--|...|++.++..
T Consensus 1 ~gl~i~~vGD-~~~rv~~Sl~~~~~~ 25 (158)
T PF00185_consen 1 KGLKIAYVGD-GHNRVAHSLIELLAK 25 (158)
T ss_dssp TTEEEEEESS-TTSHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCChHHHHHHHHHHH
Confidence 4899999999 657888999988874
No 12
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=48.66 E-value=8 Score=32.30 Aligned_cols=32 Identities=6% Similarity=0.134 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 244 LVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 244 ~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
.+.|+..++++++.+.+. .++++|++.+..|.
T Consensus 76 ~~~~~~~~~~li~~i~~~--~~~~~iv~~~~~~~ 107 (189)
T cd01825 76 ASEYRQQLREFIKRLRQI--LPNASILLVGPPDS 107 (189)
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCeEEEEcCCch
Confidence 457788888888777652 35677888887664
No 13
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=46.54 E-value=10 Score=32.10 Aligned_cols=54 Identities=13% Similarity=-0.007 Sum_probs=31.3
Q ss_pred CCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCC
Q 023524 206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISP 276 (281)
Q Consensus 206 ~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP 276 (281)
..+|+||+..|.==. ...+.. .+. ...+.|+..++.+++.+.. ++.|++-+..|
T Consensus 68 ~~pd~V~i~~G~ND~----------~~~~~~-~~~-~~~~~~~~~~~~ii~~~~~-----~~~vi~~~~~p 121 (193)
T cd01835 68 NVPNRLVLSVGLNDT----------ARGGRK-RPQ-LSARAFLFGLNQLLEEAKR-----LVPVLVVGPTP 121 (193)
T ss_pred CCCCEEEEEecCccc----------ccccCc-ccc-cCHHHHHHHHHHHHHHHhc-----CCcEEEEeCCC
Confidence 468999999995211 111000 011 2356788888888765432 35677777655
No 14
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=46.14 E-value=39 Score=28.85 Aligned_cols=44 Identities=23% Similarity=0.431 Sum_probs=29.3
Q ss_pred CccCC-CCCChHHHHHHh------cCCeEEEEeccchhHHHHHHHHHhhhcCC
Q 023524 104 LNCQL-PRFNGLEFLVKM------KGKTVMFVGDSLGLNQWESLICMIHAAAP 149 (281)
Q Consensus 104 ~~C~L-prFd~~~fL~~l------rgK~i~FVGDSl~Rnq~~SLlclL~~~~~ 149 (281)
.+..+ .|+++.+|...+ ++++|.|+|.+- ..-+.+...|....|
T Consensus 23 ~g~~~~~rv~g~dl~~~l~~~~~~~~~~ifllG~~~--~~~~~~~~~l~~~yP 73 (172)
T PF03808_consen 23 LGRPLPERVTGSDLFPDLLRRAEQRGKRIFLLGGSE--EVLEKAAANLRRRYP 73 (172)
T ss_pred cCCCCCcccCHHHHHHHHHHHHHHcCCeEEEEeCCH--HHHHHHHHHHHHHCC
Confidence 36667 899999977554 378999999983 334444555544333
No 15
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=43.54 E-value=12 Score=31.47 Aligned_cols=29 Identities=10% Similarity=0.104 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHhhCCCCCceEEEEecCC
Q 023524 246 ALEKGLRTWANWVDNNIDRSKTRVFFQSISP 276 (281)
Q Consensus 246 AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP 276 (281)
.|+..++.+++.|.++ .+++.|++-+..|
T Consensus 75 ~~~~~~~~~i~~i~~~--~p~~~iil~~~~~ 103 (177)
T cd01844 75 MVRERLGPLVKGLRET--HPDTPILLVSPRY 103 (177)
T ss_pred HHHHHHHHHHHHHHHH--CcCCCEEEEecCC
Confidence 5677777777777653 3456677776544
No 16
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=42.52 E-value=10 Score=33.04 Aligned_cols=52 Identities=10% Similarity=0.197 Sum_probs=31.7
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCCC
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTH 278 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~H 278 (281)
.+|+||+..|.= +... + ...+.+...++.+++.+.+. .+++.|++-+..|..
T Consensus 89 ~pd~VvI~~G~N----------D~~~-~-------~~~~~~~~~l~~ii~~l~~~--~P~~~Iil~~~~p~~ 140 (214)
T cd01820 89 NPKVVVLLIGTN----------NIGH-T-------TTAEEIAEGILAIVEEIREK--LPNAKILLLGLLPRG 140 (214)
T ss_pred CCCEEEEEeccc----------ccCC-C-------CCHHHHHHHHHHHHHHHHHH--CCCCeEEEEeccCCC
Confidence 489999988842 1111 0 02445667777777766552 345678887877753
No 17
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=41.08 E-value=12 Score=31.28 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=30.3
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCC
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISP 276 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP 276 (281)
.+|+||+..|.= . ... + ....+.|+..++++++.+. .+.+.|++-|..|
T Consensus 67 ~~d~vii~~G~N---D-------~~~-~------~~~~~~~~~~~~~~i~~i~----~~~~~vil~~~~~ 115 (185)
T cd01832 67 RPDLVTLLAGGN---D-------ILR-P------GTDPDTYRADLEEAVRRLR----AAGARVVVFTIPD 115 (185)
T ss_pred CCCEEEEecccc---c-------ccc-C------CCCHHHHHHHHHHHHHHHH----hCCCEEEEecCCC
Confidence 689999988831 1 100 0 1234578888888887765 2345677777654
No 18
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=38.93 E-value=16 Score=30.15 Aligned_cols=51 Identities=12% Similarity=0.104 Sum_probs=31.0
Q ss_pred CCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEec-CCCC
Q 023524 206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSI-SPTH 278 (281)
Q Consensus 206 ~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~-SP~H 278 (281)
..+|+||+..|.-=. .. + ...+.|+..++++++-+.+. ..+|++-+. .|.+
T Consensus 63 ~~pd~v~i~~G~ND~----------~~-~-------~~~~~~~~~l~~li~~~~~~----~~~vil~~~~~~~~ 114 (177)
T cd01822 63 HKPDLVILELGGNDG----------LR-G-------IPPDQTRANLRQMIETAQAR----GAPVLLVGMQAPPN 114 (177)
T ss_pred cCCCEEEEeccCccc----------cc-C-------CCHHHHHHHHHHHHHHHHHC----CCeEEEEecCCCCc
Confidence 368999999995311 00 0 12456788888888766542 455777665 3554
No 19
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=38.33 E-value=16 Score=30.41 Aligned_cols=48 Identities=6% Similarity=-0.016 Sum_probs=27.2
Q ss_pred ccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEe
Q 023524 208 ADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQS 273 (281)
Q Consensus 208 ~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT 273 (281)
+|+||++.|.==.. ... ......|+.+++.+++-+.+. .+++.+++-+
T Consensus 56 pd~vii~~G~ND~~----------~~~------~~~~~~~~~~~~~li~~i~~~--~p~~~i~~~~ 103 (169)
T cd01831 56 PDLVVINLGTNDFS----------TGN------NPPGEDFTNAYVEFIEELRKR--YPDAPIVLML 103 (169)
T ss_pred CCEEEEECCcCCCC----------CCC------CCCHHHHHHHHHHHHHHHHHH--CCCCeEEEEe
Confidence 89999998852211 100 012456777777777766552 3455565544
No 20
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=38.21 E-value=30 Score=27.24 Aligned_cols=21 Identities=38% Similarity=0.414 Sum_probs=15.1
Q ss_pred CcchhHHHHHHHHHHHHHhhc
Q 023524 1 MAVLFLKLLGSFLTILCLVLV 21 (281)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~ 21 (281)
||-=.+-||++++|+|+|+..
T Consensus 1 MaSK~~llL~l~LA~lLlisS 21 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISS 21 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHh
Confidence 554456788888888887754
No 21
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=37.80 E-value=19 Score=30.98 Aligned_cols=15 Identities=33% Similarity=0.585 Sum_probs=12.9
Q ss_pred CCeEEEEeccchhHH
Q 023524 122 GKTVMFVGDSLGLNQ 136 (281)
Q Consensus 122 gK~i~FVGDSl~Rnq 136 (281)
+.+|+|+|||++...
T Consensus 10 ~~~iv~~GDSit~G~ 24 (191)
T PRK10528 10 ADTLLILGDSLSAGY 24 (191)
T ss_pred CCEEEEEeCchhhcC
Confidence 679999999998763
No 22
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=37.21 E-value=29 Score=27.53 Aligned_cols=22 Identities=18% Similarity=0.308 Sum_probs=17.2
Q ss_pred HHHHHHhcCCeEEEEeccchhH
Q 023524 114 LEFLVKMKGKTVMFVGDSLGLN 135 (281)
Q Consensus 114 ~~fL~~lrgK~i~FVGDSl~Rn 135 (281)
+.+++..-++++++||||-..-
T Consensus 56 ~~i~~~fP~~kfiLIGDsgq~D 77 (100)
T PF09949_consen 56 ERILRDFPERKFILIGDSGQHD 77 (100)
T ss_pred HHHHHHCCCCcEEEEeeCCCcC
Confidence 4466777799999999996553
No 23
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=37.09 E-value=25 Score=33.21 Aligned_cols=25 Identities=24% Similarity=0.252 Sum_probs=21.0
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
++|++|+||||. .|...|++.++..
T Consensus 145 l~g~kva~vGD~--~~v~~S~~~~~~~ 169 (302)
T PRK14805 145 VSKVKLAYVGDG--NNVTHSLMYGAAI 169 (302)
T ss_pred cCCcEEEEEcCC--CccHHHHHHHHHH
Confidence 679999999994 5788999988864
No 24
>PF12026 DUF3513: Domain of unknown function (DUF3513); InterPro: IPR021901 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 192 to 218 amino acids in length. This domain is found associated with PF00018 from PFAM, PF08824 from PFAM. This domain has a conserved QPP sequence motif. ; PDB: 3T6G_D 1X27_N.
Probab=36.35 E-value=2 Score=38.71 Aligned_cols=17 Identities=24% Similarity=0.606 Sum_probs=13.9
Q ss_pred hcCCeEEEEeccchhHH
Q 023524 120 MKGKTVMFVGDSLGLNQ 136 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq 136 (281)
|-+.+++||||+|.|+-
T Consensus 132 l~ahkLVfiGDTl~r~~ 148 (210)
T PF12026_consen 132 LSAHKLVFIGDTLCREA 148 (210)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred EEeeeeeeeccHHHHHh
Confidence 44889999999999874
No 25
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=32.76 E-value=22 Score=30.47 Aligned_cols=55 Identities=11% Similarity=0.158 Sum_probs=33.9
Q ss_pred CCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCC---CCCceEEEEecCC
Q 023524 206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNID---RSKTRVFFQSISP 276 (281)
Q Consensus 206 ~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~---~~kt~VffRT~SP 276 (281)
..+|+||+..|.= |..... . ...+.|+..++++++-|.+... .+.++|++-+..|
T Consensus 78 ~~pd~vii~lGtN----------D~~~~~-----~-~~~~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~ 135 (208)
T cd01839 78 SPLDLVIIMLGTN----------DLKSYF-----N-LSAAEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPP 135 (208)
T ss_pred CCCCEEEEecccc----------cccccc-----C-CCHHHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCc
Confidence 4689999998851 111000 0 1246788888888887765321 2567788877655
No 26
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=30.14 E-value=42 Score=32.14 Aligned_cols=26 Identities=23% Similarity=0.231 Sum_probs=21.2
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
++|++|+||||..+ |...|++-++..
T Consensus 153 l~g~kia~vGD~~~-~v~~Sl~~~~~~ 178 (332)
T PRK04284 153 YKDIKFTYVGDGRN-NVANALMQGAAI 178 (332)
T ss_pred cCCcEEEEecCCCc-chHHHHHHHHHH
Confidence 67999999999765 588888887763
No 27
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=29.65 E-value=26 Score=29.18 Aligned_cols=48 Identities=15% Similarity=0.151 Sum_probs=30.3
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCC
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISP 276 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP 276 (281)
.+|+||+..|..=.. . + ...+.|.+.++.+++.+.+ ....+++.+..|
T Consensus 59 ~~d~v~i~~G~ND~~----------~-~-------~~~~~~~~~~~~li~~~~~----~~~~~il~~~~p 106 (183)
T cd04501 59 KPAVVIIMGGTNDII----------V-N-------TSLEMIKDNIRSMVELAEA----NGIKVILASPLP 106 (183)
T ss_pred CCCEEEEEeccCccc----------c-C-------CCHHHHHHHHHHHHHHHHH----CCCcEEEEeCCC
Confidence 479999998864211 0 0 1345778888888877644 234577777666
No 28
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=29.20 E-value=1.5e+02 Score=24.63 Aligned_cols=54 Identities=13% Similarity=0.095 Sum_probs=35.5
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCCC
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTH 278 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~H 278 (281)
.+|+||+..|.==. .... -...+.|+..++.+++.+.+. .+++++++-|..|..
T Consensus 67 ~pd~Vii~~G~ND~----------~~~~------~~~~~~~~~~l~~li~~i~~~--~~~~~iil~t~~p~~ 120 (188)
T cd01827 67 NPNIVIIKLGTNDA----------KPQN------WKYKDDFKKDYETMIDSFQAL--PSKPKIYICYPIPAY 120 (188)
T ss_pred CCCEEEEEcccCCC----------CCCC------CccHHHHHHHHHHHHHHHHHH--CCCCeEEEEeCCccc
Confidence 58999999995211 1100 012457888888888877652 456678888877743
No 29
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=27.93 E-value=60 Score=31.07 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=30.2
Q ss_pred HHHHHH-HHHHHHHHHhhCCCCCceEEEEecCCCCCC
Q 023524 245 VALEKG-LRTWANWVDNNIDRSKTRVFFQSISPTHYN 280 (281)
Q Consensus 245 ~Ayrka-L~t~~~wi~~~l~~~kt~VffRT~SP~HFe 280 (281)
+..+.+ ...++.||.-.+||.|+.+|++|--|.|+|
T Consensus 59 ~~l~~~~~e~~a~~LA~GiDP~k~~if~QS~v~e~~e 95 (314)
T COG0180 59 EDLRQATREVAADYLAVGLDPEKSTIFLQSEVPEHAE 95 (314)
T ss_pred HHHHHHHHHHHHHHHHhccCccccEEEEccCchHHHH
Confidence 566766 555678999889999999999999999975
No 30
>PRK11877 psaI photosystem I reaction center subunit VIII; Reviewed
Probab=26.91 E-value=67 Score=21.23 Aligned_cols=20 Identities=20% Similarity=0.406 Sum_probs=13.5
Q ss_pred chhHHHHHHH-----HHHHHHhhcc
Q 023524 3 VLFLKLLGSF-----LTILCLVLVK 22 (281)
Q Consensus 3 ~~~~~~~~~~-----~~~~~~~~~~ 22 (281)
.+|.||.|++ .+.+++|.++
T Consensus 12 sI~VPlVGlvfPai~Mallf~yIe~ 36 (38)
T PRK11877 12 WIFVPLVGWVFPAVFMVLLGRYITA 36 (38)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4688999984 4556666653
No 31
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=26.07 E-value=1.3e+02 Score=25.53 Aligned_cols=40 Identities=23% Similarity=0.321 Sum_probs=24.0
Q ss_pred CCCCChHHHHHH----h--cCCeEEEEeccchhHHHHHHHHHhhhcCC
Q 023524 108 LPRFNGLEFLVK----M--KGKTVMFVGDSLGLNQWESLICMIHAAAP 149 (281)
Q Consensus 108 LprFd~~~fL~~----l--rgK~i~FVGDSl~Rnq~~SLlclL~~~~~ 149 (281)
.+++++.|+... . ++++|.|+|.+ -...+.+..-|....|
T Consensus 26 ~~r~~g~dl~~~ll~~~~~~~~~v~llG~~--~~~~~~~~~~l~~~yp 71 (171)
T cd06533 26 PERVTGSDLMPALLELAAQKGLRVFLLGAK--PEVLEKAAERLRARYP 71 (171)
T ss_pred CcccCcHHHHHHHHHHHHHcCCeEEEECCC--HHHHHHHHHHHHHHCC
Confidence 467777776543 2 37899999987 3333444444444333
No 32
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=25.19 E-value=61 Score=31.11 Aligned_cols=26 Identities=31% Similarity=0.382 Sum_probs=21.3
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
++|++|++|||..+ |-..|++.++..
T Consensus 153 l~g~~va~vGd~~~-~v~~Sl~~~~~~ 178 (331)
T PRK02102 153 LKGLKLAYVGDGRN-NMANSLMVGGAK 178 (331)
T ss_pred CCCCEEEEECCCcc-cHHHHHHHHHHH
Confidence 67999999999854 588888887763
No 33
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=24.87 E-value=39 Score=28.72 Aligned_cols=55 Identities=9% Similarity=0.013 Sum_probs=33.5
Q ss_pred CCCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCC
Q 023524 205 WLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISP 276 (281)
Q Consensus 205 w~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP 276 (281)
.+.+|+||+..|.-=..... .. .. ...+.|+..|+++++.+.+ .+..+++-|..|
T Consensus 63 ~~~pdlVii~~G~ND~~~~~---------~~---~~-~~~~~~~~nl~~ii~~~~~----~~~~~il~tp~~ 117 (198)
T cd01821 63 IKPGDYVLIQFGHNDQKPKD---------PE---YT-EPYTTYKEYLRRYIAEARA----KGATPILVTPVT 117 (198)
T ss_pred CCCCCEEEEECCCCCCCCCC---------CC---CC-CcHHHHHHHHHHHHHHHHH----CCCeEEEECCcc
Confidence 34789999999964321100 00 01 2356789999999887654 245577766555
No 34
>PLN02342 ornithine carbamoyltransferase
Probab=24.66 E-value=62 Score=31.35 Aligned_cols=25 Identities=28% Similarity=0.492 Sum_probs=21.0
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
+.|++|++|||- .|...|++.++..
T Consensus 192 l~glkva~vGD~--~nva~Sli~~~~~ 216 (348)
T PLN02342 192 LEGTKVVYVGDG--NNIVHSWLLLAAV 216 (348)
T ss_pred cCCCEEEEECCC--chhHHHHHHHHHH
Confidence 679999999995 4699999988764
No 35
>TIGR03052 PS_I_psaI photosystem I reaction center subunit VIII. Members of this protein family are PsaI, subunit VIII of the photosystem I reaction center. This protein is found in both the Cyanobacteria and the chloroplasts of plants, but is absent from non-oxygenic photosynthetic bacteria such as Rhodobacter sphaeroides. Species that contain photosystem I also contain photosystem II, which splits water and releases molecular oxygen.
Probab=24.60 E-value=58 Score=20.57 Aligned_cols=20 Identities=20% Similarity=0.451 Sum_probs=13.1
Q ss_pred chhHHHHHHH-----HHHHHHhhcc
Q 023524 3 VLFLKLLGSF-----LTILCLVLVK 22 (281)
Q Consensus 3 ~~~~~~~~~~-----~~~~~~~~~~ 22 (281)
.+|.||.|.+ .|.+++|.++
T Consensus 5 sI~VPlVglvfPai~Ma~lf~yIe~ 29 (31)
T TIGR03052 5 SIFVPLVGLVFPAVFMALLFRYIEA 29 (31)
T ss_pred eeehhHHHHHHHHHHHHHHHHheec
Confidence 3578888874 4556666653
No 36
>PRK10113 cell division modulator; Provisional
Probab=24.51 E-value=38 Score=25.31 Aligned_cols=16 Identities=44% Similarity=0.667 Sum_probs=11.7
Q ss_pred HhcCCeEEEE--eccchh
Q 023524 119 KMKGKTVMFV--GDSLGL 134 (281)
Q Consensus 119 ~lrgK~i~FV--GDSl~R 134 (281)
.||||.++|| |||.-|
T Consensus 38 ~LrGKYVAFvl~ge~FrR 55 (80)
T PRK10113 38 MLRGKYVAFVLMGESFLR 55 (80)
T ss_pred eeccceEEEEEechhhcc
Confidence 4899999997 555444
No 37
>PLN02527 aspartate carbamoyltransferase
Probab=23.78 E-value=67 Score=30.39 Aligned_cols=26 Identities=27% Similarity=0.322 Sum_probs=20.6
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIH 145 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~ 145 (281)
++|++|+||||-..-+...|++-.+.
T Consensus 149 l~g~kva~vGD~~~~rv~~Sl~~~~~ 174 (306)
T PLN02527 149 LDGIKVGLVGDLANGRTVRSLAYLLA 174 (306)
T ss_pred cCCCEEEEECCCCCChhHHHHHHHHH
Confidence 67899999999764357888887765
No 38
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=23.22 E-value=38 Score=27.78 Aligned_cols=15 Identities=27% Similarity=0.419 Sum_probs=11.3
Q ss_pred EEEEeccchhHHHHH
Q 023524 125 VMFVGDSLGLNQWES 139 (281)
Q Consensus 125 i~FVGDSl~Rnq~~S 139 (281)
|.|+|||++-..-..
T Consensus 2 v~~~GDSv~~~~~~~ 16 (150)
T cd01840 2 ITAIGDSVMLDSSPA 16 (150)
T ss_pred eeEEeehHHHchHHH
Confidence 678999998875333
No 39
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=23.05 E-value=65 Score=30.95 Aligned_cols=26 Identities=23% Similarity=0.281 Sum_probs=20.3
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
+.|++|+||||-.. |...|++-++..
T Consensus 154 l~g~~ia~vGD~~~-~v~~Sl~~~~~~ 179 (336)
T PRK03515 154 FNEMTLAYAGDARN-NMGNSLLEAAAL 179 (336)
T ss_pred cCCCEEEEeCCCcC-cHHHHHHHHHHH
Confidence 56899999999433 588888887763
No 40
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=22.99 E-value=63 Score=30.87 Aligned_cols=21 Identities=38% Similarity=0.572 Sum_probs=18.4
Q ss_pred hcCCeEEEEeccchhHHHHHHHH
Q 023524 120 MKGKTVMFVGDSLGLNQWESLIC 142 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlc 142 (281)
++|++++||||- -|.-.||+-
T Consensus 151 l~g~k~a~vGDg--NNv~nSl~~ 171 (310)
T COG0078 151 LKGLKLAYVGDG--NNVANSLLL 171 (310)
T ss_pred ccCcEEEEEcCc--chHHHHHHH
Confidence 689999999998 888888765
No 41
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=22.45 E-value=72 Score=30.20 Aligned_cols=27 Identities=26% Similarity=0.214 Sum_probs=21.2
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
++|++|+||||-..-|...|++-++..
T Consensus 154 l~g~kv~~vGD~~~~~v~~Sl~~~~~~ 180 (305)
T PRK00856 154 LEGLKVAIVGDIKHSRVARSNIQALTR 180 (305)
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHH
Confidence 679999999997544777888777654
No 42
>PF13289 SIR2_2: SIR2-like domain
Probab=22.44 E-value=1.6e+02 Score=23.23 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=23.5
Q ss_pred HHHHHhcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 115 EFLVKMKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 115 ~fL~~lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
.+.+.++.+.++|||=|+.-.....++.-+..
T Consensus 79 ~l~~~l~~~~~lfiGys~~D~~i~~~l~~~~~ 110 (143)
T PF13289_consen 79 FLRSLLRSKTLLFIGYSFNDPDIRQLLRSALE 110 (143)
T ss_pred HHHHHHcCCCEEEEEECCCCHHHHHHHHHHHH
Confidence 35577889999999988876666666654443
No 43
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=22.22 E-value=68 Score=26.99 Aligned_cols=19 Identities=26% Similarity=0.534 Sum_probs=14.8
Q ss_pred HHHHHHhc--CCeEEEEeccc
Q 023524 114 LEFLVKMK--GKTVMFVGDSL 132 (281)
Q Consensus 114 ~~fL~~lr--gK~i~FVGDSl 132 (281)
..+++.|+ +..+++|||++
T Consensus 185 ~~~i~~l~~~~~~v~~vGDg~ 205 (215)
T PF00702_consen 185 LRIIKELQVKPGEVAMVGDGV 205 (215)
T ss_dssp HHHHHHHTCTGGGEEEEESSG
T ss_pred HHHHHHHhcCCCEEEEEccCH
Confidence 35667775 66999999998
No 44
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=21.75 E-value=94 Score=25.65 Aligned_cols=12 Identities=17% Similarity=0.650 Sum_probs=10.2
Q ss_pred CCeEEEEeccch
Q 023524 122 GKTVMFVGDSLG 133 (281)
Q Consensus 122 gK~i~FVGDSl~ 133 (281)
.+.++|||||.+
T Consensus 162 ~~~~i~iGD~~~ 173 (188)
T TIGR01489 162 YQHIIYIGDGVT 173 (188)
T ss_pred CceEEEECCCcc
Confidence 568999999965
No 45
>CHL00186 psaI photosystem I subunit VIII; Validated
Probab=21.75 E-value=94 Score=20.31 Aligned_cols=20 Identities=25% Similarity=0.461 Sum_probs=13.7
Q ss_pred chhHHHHHHH-----HHHHHHhhcc
Q 023524 3 VLFLKLLGSF-----LTILCLVLVK 22 (281)
Q Consensus 3 ~~~~~~~~~~-----~~~~~~~~~~ 22 (281)
.+|.||.|.+ .|.+++|.|+
T Consensus 8 sI~VPlVGlvfPai~Ma~lf~yIe~ 32 (36)
T CHL00186 8 SILVPLVGLVFPAIAMASLFLYIQK 32 (36)
T ss_pred hhHHhHHHHHHHHHHHHHHHHHhhh
Confidence 3678888884 4566777664
No 46
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=21.26 E-value=79 Score=30.29 Aligned_cols=26 Identities=19% Similarity=0.319 Sum_probs=20.5
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
+.|++|+||||-.. |...|++.++..
T Consensus 154 l~gl~ia~vGD~~~-~v~~Sl~~~~~~ 179 (334)
T PRK01713 154 LSEISYVYIGDARN-NMGNSLLLIGAK 179 (334)
T ss_pred cCCcEEEEECCCcc-CHHHHHHHHHHH
Confidence 57899999999644 488888887764
No 47
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised. All the members are 350-400 amino acids long.; PDB: 2QM3_A.
Probab=20.97 E-value=47 Score=30.64 Aligned_cols=12 Identities=42% Similarity=1.113 Sum_probs=8.8
Q ss_pred hcCCeEEEEecc
Q 023524 120 MKGKTVMFVGDS 131 (281)
Q Consensus 120 lrgK~i~FVGDS 131 (281)
|.||+|.||||=
T Consensus 43 L~gk~il~lGDD 54 (243)
T PF01861_consen 43 LEGKRILFLGDD 54 (243)
T ss_dssp STT-EEEEES-T
T ss_pred ccCCEEEEEcCC
Confidence 679999999983
No 48
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=20.37 E-value=50 Score=28.08 Aligned_cols=29 Identities=7% Similarity=0.155 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCceEEEEec
Q 023524 244 LVALEKGLRTWANWVDNNIDRSKTRVFFQSI 274 (281)
Q Consensus 244 ~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~ 274 (281)
.+.|++.|+++++.+.+. .++++|++-++
T Consensus 101 ~~~~~~~l~~~i~~ir~~--~p~~~Ivv~~~ 129 (204)
T cd04506 101 EETYQNNLKKIFKEIRKL--NPDAPIFLVGL 129 (204)
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCeEEEEec
Confidence 467889999998887652 34556666654
No 49
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=20.15 E-value=83 Score=30.25 Aligned_cols=26 Identities=23% Similarity=0.225 Sum_probs=20.3
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIH 145 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~ 145 (281)
+.|++|++|||-..-|...|++.+|.
T Consensus 157 l~g~kia~vGD~~~~rv~~Sl~~~l~ 182 (338)
T PRK08192 157 IDGMHIAMVGDLKFGRTVHSLSRLLC 182 (338)
T ss_pred cCCCEEEEECcCCCCchHHHHHHHHH
Confidence 67899999999754467788777665
No 50
>TIGR01728 SsuA_fam ABC transporter, substrate-binding protein, aliphatic sulfonates family. Members of this family are substrate-binding periplasmic proteins of ABC transporters. This subfamily includes SsuA, a member of a transporter operon needed to obtain sulfur from aliphatic sulfonates. Related proteins outside the scope of this model include taurine (NH2-CH2-CH2-S03H) binding proteins, the probable sulfate ester binding protein AtsR, and the probable aromatic sulfonate binding protein AsfC. All these families make sulfur available when Cys and sulfate levels are low. Please note that phylogenetic analysis by neighbor-joining suggests that a number of sequences belonging to this family have been excluded because of scoring lower than taurine-binding proteins.
Probab=20.15 E-value=2.1e+02 Score=25.00 Aligned_cols=23 Identities=17% Similarity=0.214 Sum_probs=16.2
Q ss_pred HHhcCCeEEEEeccchhHHHHHH
Q 023524 118 VKMKGKTVMFVGDSLGLNQWESL 140 (281)
Q Consensus 118 ~~lrgK~i~FVGDSl~Rnq~~SL 140 (281)
+=|+||+|++...+.+..++..+
T Consensus 97 ~dL~Gk~i~~~~~~~~~~~~~~~ 119 (288)
T TIGR01728 97 ADLKGKRIAVPKGGSGHDLLLRA 119 (288)
T ss_pred HHcCCCEEEecCCccHHHHHHHH
Confidence 34789999987777666655553
Done!