Query 023524
Match_columns 281
No_of_seqs 182 out of 723
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 08:17:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023524.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023524hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 93.4 0.12 4.3E-06 42.6 5.9 50 206-277 73-122 (200)
2 4hf7_A Putative acylhydrolase; 74.4 1.3 4.4E-05 36.9 1.9 52 207-277 78-129 (209)
3 3hp4_A GDSL-esterase; psychrot 71.8 1.3 4.3E-05 35.5 1.2 49 207-277 66-115 (185)
4 3rjt_A Lipolytic protein G-D-S 62.9 2.5 8.7E-05 34.1 1.4 55 207-273 83-137 (216)
5 1ivn_A Thioesterase I; hydrola 56.3 3.1 0.00011 33.5 0.8 49 207-277 62-111 (190)
6 3mil_A Isoamyl acetate-hydroly 55.7 3.1 0.00011 34.4 0.7 54 206-277 71-124 (240)
7 1yzf_A Lipase/acylhydrolase; s 52.6 3.7 0.00013 32.5 0.6 50 206-277 66-115 (195)
8 2q0q_A ARYL esterase; SGNH hyd 48.7 4.6 0.00016 32.8 0.6 53 208-276 84-141 (216)
9 1vcc_A DNA topoisomerase I; DN 47.0 3 0.0001 30.3 -0.7 15 123-137 55-70 (77)
10 3p94_A GDSL-like lipase; serin 46.5 5.9 0.0002 31.8 1.0 52 207-277 74-125 (204)
11 2hsj_A Putative platelet activ 45.6 7.1 0.00024 31.7 1.3 52 207-278 85-136 (214)
12 3dc7_A Putative uncharacterize 45.3 7.6 0.00026 32.2 1.5 59 206-276 81-139 (232)
13 3dci_A Arylesterase; SGNH_hydr 45.2 5.6 0.00019 33.3 0.6 54 208-277 102-158 (232)
14 3bzw_A Putative lipase; protei 42.5 9.7 0.00033 32.8 1.8 29 246-276 142-170 (274)
15 1vjg_A Putative lipase from th 41.9 5.9 0.0002 32.6 0.2 54 206-277 87-140 (218)
16 1fxw_F Alpha2, platelet-activa 40.9 9.6 0.00033 31.7 1.4 50 207-278 94-143 (229)
17 4i8i_A Hypothetical protein; 5 39.2 24 0.00083 31.4 3.9 120 123-277 11-142 (271)
18 1es9_A PAF-AH, platelet-activa 39.1 10 0.00035 31.5 1.3 49 207-277 93-141 (232)
19 2vpt_A Lipolytic enzyme; ester 34.9 12 0.0004 30.8 1.0 27 249-277 105-131 (215)
20 2waa_A Acetyl esterase, xylan 32.2 15 0.0005 33.3 1.3 48 207-273 225-272 (347)
21 2w9x_A AXE2A, CJCE2B, putative 30.8 17 0.00057 33.2 1.4 28 244-273 266-293 (366)
22 3tpf_A Otcase, ornithine carba 29.9 31 0.0011 31.4 3.0 25 120-146 143-168 (307)
23 1k7c_A Rhamnogalacturonan acet 29.2 18 0.00063 30.4 1.3 28 246-277 109-136 (233)
24 3grf_A Ornithine carbamoyltran 28.7 32 0.0011 31.7 2.9 27 119-146 158-184 (328)
25 2wao_A Endoglucanase E; plant 28.5 16 0.00055 32.8 0.8 48 207-273 213-260 (341)
26 4amu_A Ornithine carbamoyltran 27.2 36 0.0012 31.8 3.0 26 120-146 178-203 (365)
27 3r7f_A Aspartate carbamoyltran 27.0 35 0.0012 31.0 2.9 27 120-146 145-171 (304)
28 3t6g_B Breast cancer anti-estr 26.9 2.3 7.8E-05 37.4 -4.9 15 121-135 145-159 (229)
29 2o14_A Hypothetical protein YX 26.7 25 0.00085 32.3 1.8 48 209-276 232-279 (375)
30 3ksx_A Nitrate transport prote 26.2 31 0.0011 30.0 2.3 23 119-141 128-150 (324)
31 3q98_A Transcarbamylase; rossm 25.3 43 0.0015 31.6 3.2 27 120-146 189-220 (399)
32 3sds_A Ornithine carbamoyltran 24.4 40 0.0014 31.3 2.8 24 121-146 187-210 (353)
33 3skv_A SSFX3; jelly roll, GDSL 24.1 28 0.00096 32.4 1.7 14 122-135 185-198 (385)
34 2yfk_A Aspartate/ornithine car 23.9 48 0.0016 31.6 3.2 27 120-146 186-217 (418)
35 1jb0_I Photosystem 1 reaction 23.7 45 0.0015 21.1 2.0 19 4-22 13-36 (38)
36 2k6g_A Replication factor C su 23.6 49 0.0017 25.3 2.7 28 119-146 32-61 (109)
37 3csu_A Protein (aspartate carb 23.3 46 0.0016 30.3 2.9 28 120-147 152-179 (310)
38 1pg5_A Aspartate carbamoyltran 23.2 49 0.0017 29.9 3.0 28 120-147 147-174 (299)
39 1oth_A Protein (ornithine tran 22.2 38 0.0013 31.0 2.1 25 120-146 153-177 (321)
40 4f2g_A Otcase 1, ornithine car 22.1 48 0.0017 30.1 2.8 25 120-146 152-176 (309)
41 4ep1_A Otcase, ornithine carba 21.8 49 0.0017 30.6 2.8 25 120-146 177-201 (340)
42 3gd5_A Otcase, ornithine carba 21.5 50 0.0017 30.2 2.8 25 120-146 155-179 (323)
43 4ekn_B Aspartate carbamoyltran 21.2 54 0.0018 29.7 2.9 27 120-146 149-175 (306)
44 1oeg_A Apolipoprotein E; siali 21.0 51 0.0017 19.1 1.7 17 133-149 6-22 (26)
45 4a8t_A Putrescine carbamoyltra 20.7 53 0.0018 30.3 2.7 25 120-146 173-197 (339)
46 1vlv_A Otcase, ornithine carba 20.4 55 0.0019 30.0 2.8 26 120-146 165-190 (325)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=93.42 E-value=0.12 Score=42.57 Aligned_cols=50 Identities=16% Similarity=0.256 Sum_probs=36.3
Q ss_pred CCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 206 ~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
..+|+||++.|..=.. ...+.|+..|+++++.+.+. .+++++++-|..|.
T Consensus 73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~ 122 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPV 122 (200)
T ss_dssp SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCC
T ss_pred CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCC
Confidence 4689999999964211 12457888999988877663 46678999988874
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=74.42 E-value=1.3 Score=36.90 Aligned_cols=52 Identities=15% Similarity=0.115 Sum_probs=30.4
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
.+|+||+..|.==... +. .....+.+...++++++.+.+ ++++|++-|..|.
T Consensus 78 ~Pd~vvi~~G~ND~~~-----------~~----~~~~~~~~~~~l~~ii~~~~~----~~~~iil~~~~P~ 129 (209)
T 4hf7_A 78 SPALVVINAGTNDVAE-----------NT----GAYNEDYTFGNIASMAELAKA----NKIKVILTSVLPA 129 (209)
T ss_dssp CCSEEEECCCHHHHTT-----------SS----SSCCHHHHHHHHHHHHHHHHH----TTCEEEEECCCCC
T ss_pred CCCEEEEEeCCCcCcc-----------cc----ccccHHHHHHHHHHhhHHHhc----cCceEEEEeeecc
Confidence 5899999888521100 00 002234566667777665433 4678898888774
No 3
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=71.85 E-value=1.3 Score=35.52 Aligned_cols=49 Identities=8% Similarity=0.003 Sum_probs=30.9
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEec-CCC
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSI-SPT 277 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~-SP~ 277 (281)
.+|+||+..|.-=... + ...+.|+..++.+++.+.+. ..+|++-++ .|.
T Consensus 66 ~pd~vvi~~G~ND~~~-----------~-------~~~~~~~~~~~~~i~~~~~~----~~~vvl~~~~~p~ 115 (185)
T 3hp4_A 66 EPTHVLIELGANDGLR-----------G-------FPVKKMQTNLTALVKKSQAA----NAMTALMEIYIPP 115 (185)
T ss_dssp CCSEEEEECCHHHHHT-----------T-------CCHHHHHHHHHHHHHHHHHT----TCEEEEECCCCCS
T ss_pred CCCEEEEEeecccCCC-----------C-------cCHHHHHHHHHHHHHHHHHc----CCeEEEEeCCCCC
Confidence 6899999999532100 0 12467888888888877663 345666654 443
No 4
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=62.89 E-value=2.5 Score=34.14 Aligned_cols=55 Identities=13% Similarity=0.037 Sum_probs=31.7
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEe
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQS 273 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT 273 (281)
.+|+||+..|.-=.... +..+... ......+.|+..|+.+++.+.+. ..+|++-|
T Consensus 83 ~pd~vvi~~G~ND~~~~-------~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~~----~~~vil~~ 137 (216)
T 3rjt_A 83 QPDYVSLMIGVNDVWRQ-------FDMPLVV-ERHVGIDEYRDTLRHLVATTKPR----VREMFLLS 137 (216)
T ss_dssp CCSEEEEECCHHHHHHH-------HHSTTCG-GGCCCHHHHHHHHHHHHHHHGGG----SSEEEEEC
T ss_pred CCCEEEEEeeccccchh-------hcccccc-ccCCCHHHHHHHHHHHHHHHHhc----CCeEEEEC
Confidence 48999999985321100 0000000 00123568899999998887663 56787776
No 5
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=56.27 E-value=3.1 Score=33.46 Aligned_cols=49 Identities=14% Similarity=0.022 Sum_probs=30.5
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEec-CCC
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSI-SPT 277 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~-SP~ 277 (281)
.+|+||+..|.-=... + -..+.|+..++.+++.+.+. ..+|++-+. .|.
T Consensus 62 ~pd~Vii~~G~ND~~~-----------~-------~~~~~~~~~l~~li~~~~~~----~~~vil~~~~~p~ 111 (190)
T 1ivn_A 62 QPRWVLVELGGNDGLR-----------G-------FQPQQTEQTLRQILQDVKAA----NAEPLLMQIRLPA 111 (190)
T ss_dssp CCSEEEEECCTTTTSS-----------S-------CCHHHHHHHHHHHHHHHHHT----TCEEEEECCCCCG
T ss_pred CCCEEEEEeecccccc-----------C-------CCHHHHHHHHHHHHHHHHHc----CCCEEEEeccCCc
Confidence 4799999988532210 0 12457888888888877653 345776664 343
No 6
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=55.67 E-value=3.1 Score=34.39 Aligned_cols=54 Identities=11% Similarity=-0.015 Sum_probs=33.9
Q ss_pred CCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 206 ~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
..+|+||+..|.-=... .+ ... ...+.|+..++.+++-+.+. ..+|++-|..|.
T Consensus 71 ~~pd~vvi~~G~ND~~~----------~~---~~~-~~~~~~~~~l~~~i~~~~~~----~~~vil~~~~p~ 124 (240)
T 3mil_A 71 SNIVMATIFLGANDACS----------AG---PQS-VPLPEFIDNIRQMVSLMKSY----HIRPIIIGPGLV 124 (240)
T ss_dssp CCEEEEEEECCTTTTSS----------SS---TTC-CCHHHHHHHHHHHHHHHHHT----TCEEEEECCCCC
T ss_pred CCCCEEEEEeecCcCCc----------cC---CCC-CCHHHHHHHHHHHHHHHHHc----CCeEEEEcCCCC
Confidence 46999999998632210 00 001 23567888888888877652 347888887663
No 7
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=52.63 E-value=3.7 Score=32.54 Aligned_cols=50 Identities=10% Similarity=0.020 Sum_probs=31.4
Q ss_pred CCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 206 ~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
..+|++|+..|.-=... +. . ...+.|+..++.+++.+. ..+|++-+..|.
T Consensus 66 ~~pd~vvi~~G~ND~~~-----------~~----~-~~~~~~~~~l~~~i~~~~------~~~vi~~~~~p~ 115 (195)
T 1yzf_A 66 EKPDEVVIFFGANDASL-----------DR----N-ITVATFRENLETMIHEIG------SEKVILITPPYA 115 (195)
T ss_dssp GCCSEEEEECCTTTTCT-----------TS----C-CCHHHHHHHHHHHHHHHC------GGGEEEECCCCC
T ss_pred cCCCEEEEEeeccccCc-----------cC----C-CCHHHHHHHHHHHHHHhc------CCEEEEEcCCCC
Confidence 46899999998632210 00 0 124577888888777653 456888787764
No 8
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=48.66 E-value=4.6 Score=32.84 Aligned_cols=53 Identities=13% Similarity=0.107 Sum_probs=33.3
Q ss_pred ccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhC-----CCCCceEEEEecCC
Q 023524 208 ADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNI-----DRSKTRVFFQSISP 276 (281)
Q Consensus 208 ~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l-----~~~kt~VffRT~SP 276 (281)
+|+||+..|.-=... . + + ...+.|+.+++.+++.+.+.- ..++++|++-+..|
T Consensus 84 ~d~vvi~~G~ND~~~----~---~--~-------~~~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p~ 141 (216)
T 2q0q_A 84 LDLVIIMLGTNDTKA----Y---F--R-------RTPLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPPP 141 (216)
T ss_dssp CSEEEEECCTGGGSG----G---G--C-------CCHHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEECCC
T ss_pred CCEEEEEecCcccch----h---c--C-------CCHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEeCCC
Confidence 499999999632211 0 0 0 124678888999888876631 01557788887655
No 9
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=47.03 E-value=3 Score=30.32 Aligned_cols=15 Identities=47% Similarity=0.833 Sum_probs=12.8
Q ss_pred CeEEEEe-ccchhHHH
Q 023524 123 KTVMFVG-DSLGLNQW 137 (281)
Q Consensus 123 K~i~FVG-DSl~Rnq~ 137 (281)
.+++||| ||-+|-||
T Consensus 55 ~~lIfvG~DSKgrkQY 70 (77)
T 1vcc_A 55 TRLIFVGSDSKGRRQY 70 (77)
T ss_dssp TSEEEEEECTTSCEEE
T ss_pred CceEEEeecCCCceee
Confidence 5699999 99998775
No 10
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=46.49 E-value=5.9 Score=31.78 Aligned_cols=52 Identities=17% Similarity=0.162 Sum_probs=32.6
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
.+|+||+..|.-=.... .. ....+.|+..++.+++.+.+ +..+|++-|..|.
T Consensus 74 ~pd~vvi~~G~ND~~~~----------~~-----~~~~~~~~~~~~~~i~~~~~----~~~~vil~~~~p~ 125 (204)
T 3p94_A 74 KPKAVVILAGINDIAHN----------NG-----VIALENVFGNLVSMAELAKA----NHIKVIFCSVLPA 125 (204)
T ss_dssp CEEEEEEECCHHHHTTT----------TS-----CCCHHHHHHHHHHHHHHHHH----TTCEEEEECCCCC
T ss_pred CCCEEEEEeecCccccc----------cC-----CCCHHHHHHHHHHHHHHHHh----CCCeEEEEeCCCC
Confidence 48999999985321110 00 01245778888888776654 3567888888775
No 11
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=45.56 E-value=7.1 Score=31.73 Aligned_cols=52 Identities=15% Similarity=0.019 Sum_probs=35.1
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCCC
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTH 278 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~H 278 (281)
.+|+||+..|.-=. .. + ...+.|+..++.+++.+.+. .++.+|++-+..|..
T Consensus 85 ~pd~vvi~~G~ND~----------~~-~-------~~~~~~~~~l~~~i~~l~~~--~p~~~iil~~~~p~~ 136 (214)
T 2hsj_A 85 AVDKIFLLIGTNDI----------GK-D-------VPVNEALNNLEAIIQSVARD--YPLTEIKLLSILPVN 136 (214)
T ss_dssp CCCEEEEECCHHHH----------HT-T-------CCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCC
T ss_pred CCCEEEEEEecCcC----------Cc-C-------CCHHHHHHHHHHHHHHHHHh--CCCCeEEEEecCCCC
Confidence 58999999885211 10 1 12457788888888877663 355789998888764
No 12
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=45.28 E-value=7.6 Score=32.20 Aligned_cols=59 Identities=15% Similarity=0.035 Sum_probs=31.0
Q ss_pred CCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCC
Q 023524 206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISP 276 (281)
Q Consensus 206 ~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP 276 (281)
..+|+||+..|.-=...+ .+..-+. + .....|+.+|+++++.+.+. .+.++|++-|..|
T Consensus 81 ~~pd~Vii~~G~ND~~~~--~~~~~~~-------~-~~~~~f~~~l~~li~~l~~~--~P~~~iil~~p~~ 139 (232)
T 3dc7_A 81 EDADFIAVFGGVNDYGRD--QPLGQYG-------D-CDMTTFYGALMMLLTGLQTN--WPTVPKLFISAIH 139 (232)
T ss_dssp TTCSEEEEECCHHHHHTT--CCCCCTT-------C-CSTTSHHHHHHHHHHHHHHH--CTTSCEEEEECCC
T ss_pred CCCCEEEEEEeccccccC--cCCcccc-------c-cchHHHHHHHHHHHHHHHHh--CCCCeEEEEeCcc
Confidence 368999999986422111 0100000 0 01235666777777777653 3455677755444
No 13
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=45.15 E-value=5.6 Score=33.29 Aligned_cols=54 Identities=19% Similarity=0.145 Sum_probs=34.2
Q ss_pred ccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCC---CCCceEEEEecCCC
Q 023524 208 ADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNID---RSKTRVFFQSISPT 277 (281)
Q Consensus 208 ~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~---~~kt~VffRT~SP~ 277 (281)
+|+||+..|.-=... .. + ...+.|+.+|+.+++.+.+... .++++|++-+..|.
T Consensus 102 ~d~VvI~~GtND~~~----~~-----~-------~~~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~ 158 (232)
T 3dci_A 102 LDLVIIMLGTNDIKP----VH-----G-------GRAEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPC 158 (232)
T ss_dssp CSEEEEECCTTTTSG----GG-----T-------SSHHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCC
T ss_pred CCEEEEEeccCCCcc----cc-----C-------CCHHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCc
Confidence 499999999522111 00 0 1356788999999888876321 15678888876553
No 14
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=42.50 E-value=9.7 Score=32.80 Aligned_cols=29 Identities=0% Similarity=-0.077 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHhhCCCCCceEEEEecCC
Q 023524 246 ALEKGLRTWANWVDNNIDRSKTRVFFQSISP 276 (281)
Q Consensus 246 AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP 276 (281)
.|+..|+.+++.+.+. .++++|++-|..|
T Consensus 142 ~~~~~l~~li~~lr~~--~p~a~Iilitp~~ 170 (274)
T 3bzw_A 142 TYRGRINIGITQLKKL--FPDKQIVLLTPLH 170 (274)
T ss_dssp SHHHHHHHHHHHHHHH--CTTSEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHH--CCCCeEEEEeccc
Confidence 5677777777776653 3567788866543
No 15
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=41.95 E-value=5.9 Score=32.56 Aligned_cols=54 Identities=15% Similarity=0.012 Sum_probs=34.2
Q ss_pred CCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 206 ~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
..+|+||+..|.-=... ..+ ... ...+.|+..++.+++.+.+. ++|++-+..|.
T Consensus 87 ~~pd~vvi~~G~ND~~~---------~~~---~~~-~~~~~~~~~l~~li~~l~~~-----~~iil~~~~p~ 140 (218)
T 1vjg_A 87 EYNSLVVFSFGLNDTTL---------ENG---KPR-VSIAETIKNTREILTQAKKL-----YPVLMISPAPY 140 (218)
T ss_dssp TSEEEEEEECCHHHHCE---------ETT---EES-SCHHHHHHHHHHHHHHHHHH-----SCEEEECCCCC
T ss_pred CCCCEEEEEecCCcchh---------hcc---ccc-CCHHHHHHHHHHHHHHHHHh-----CcEEEECCCCc
Confidence 36899999999521110 000 001 23567888888888877664 56888888775
No 16
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=40.93 E-value=9.6 Score=31.74 Aligned_cols=50 Identities=8% Similarity=0.209 Sum_probs=32.5
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCCC
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTH 278 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~H 278 (281)
.+|+||+..|.-=. | ...+.|+..|+.+++.+.+. .++++|++-+..|..
T Consensus 94 ~pd~vvi~~G~ND~-------------~-------~~~~~~~~~l~~~i~~l~~~--~p~~~iil~~~~p~~ 143 (229)
T 1fxw_F 94 KPKVIVVWVGTNNH-------------E-------NTAEEVAGGIEAIVQLINTR--QPQAKIIVLGLLPRG 143 (229)
T ss_dssp CCSEEEEECCTTCT-------------T-------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCS
T ss_pred CCCEEEEEEecCCC-------------C-------CCHHHHHHHHHHHHHHHHHH--CCCCeEEEEeCCCCC
Confidence 57999998885322 1 12456777777777777653 345678888777753
No 17
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis}
Probab=39.25 E-value=24 Score=31.36 Aligned_cols=120 Identities=13% Similarity=0.132 Sum_probs=62.5
Q ss_pred CeEEEEeccchhHHHHHHHHHhhhcCCCCceeeeeCCCceEEEEeecceEEEEEEcccceeeec-------ccceee---
Q 023524 123 KTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDV-------VHGKRV--- 192 (281)
Q Consensus 123 K~i~FVGDSl~Rnq~~SLlclL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~f~WsPfLv~~~~-------~~~~~~--- 192 (281)
.+|.|||-|++-|-+..++.-|..+.. .+..+ -...-.|.+++.+|.+....... .++..+
T Consensus 11 ~rVL~IGNS~t~n~~p~~l~~la~a~g-~~~~v--------~~~~igG~~L~~H~~~~~~~~~~~~y~k~~~~g~~~~~~ 81 (271)
T 4i8i_A 11 IKVLAIGNSFSQDAVEQYLHELGEAEG-ITMII--------GNMFIGGCSLERHVQNIRNNAPAYAYRKVEKDGEKTETR 81 (271)
T ss_dssp EEEEEEESHHHHHHHSSSHHHHHHTTT-CEEEE--------EEEECTTCCHHHHHHHHHTTCCCEEEEEECTTSCEEEEE
T ss_pred eEEEEECCCCCcCcHHHHHHHHHHhcC-CceEE--------EEEecCCccHHHHHhccccccccccccccccCCcccccc
Confidence 489999999997766555555544321 11111 11123566777777765432000 000000
Q ss_pred -EEec-cCCcccCCCCCccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEE
Q 023524 193 -LKLE-DISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVF 270 (281)
Q Consensus 193 -l~lD-~id~~a~~w~~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~Vf 270 (281)
..+. .|. =+..|+||+--+..-. ...+.|+..++.+++.+.+...+.-..+|
T Consensus 82 ~~~~~~~L~-----~~~wD~VilQe~S~~~---------------------~~~~~~~~~~~~l~~~ir~~~~p~ak~il 135 (271)
T 4i8i_A 82 SMTIEKALA-----DEKWDYISVQQASPLS---------------------GIYDSYKASLPELVNYIRERIGKETVLMM 135 (271)
T ss_dssp EECHHHHHH-----HSCCSEEEECCCGGGT---------------------TCHHHHHHHHHHHHHHHHTTSCTTCEEEE
T ss_pred chhHHHHhh-----cCCCCEEEeCCCCCCC---------------------CCHHHHHHHHHHHHHHHHhhcCCCCEEEE
Confidence 0011 011 1357888886553211 12457788889999888774322224567
Q ss_pred EEecCCC
Q 023524 271 FQSISPT 277 (281)
Q Consensus 271 fRT~SP~ 277 (281)
+.|.+-.
T Consensus 136 ~~TWa~~ 142 (271)
T 4i8i_A 136 HQTWAYA 142 (271)
T ss_dssp EECCCCC
T ss_pred EeccCCC
Confidence 7786543
No 18
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=39.10 E-value=10 Score=31.54 Aligned_cols=49 Identities=12% Similarity=0.230 Sum_probs=33.0
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
.+|+||+..|.-=.. ...+.|+..++.+++.+.+. .++++|++-+..|.
T Consensus 93 ~pd~vvi~~G~ND~~--------------------~~~~~~~~~l~~~i~~l~~~--~p~~~ii~~~~~p~ 141 (232)
T 1es9_A 93 RPKIVVVWVGTNNHG--------------------HTAEQVTGGIKAIVQLVNER--QPQARVVVLGLLPR 141 (232)
T ss_dssp CCSEEEEECCTTCTT--------------------SCHHHHHHHHHHHHHHHHHH--STTCEEEEECCCCC
T ss_pred CCCEEEEEeecCCCC--------------------CCHHHHHHHHHHHHHHHHHH--CCCCeEEEecCCCC
Confidence 689999988852110 12456777788887777663 34677888888774
No 19
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=34.95 E-value=12 Score=30.81 Aligned_cols=27 Identities=15% Similarity=0.252 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 249 KGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 249 kaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
..++.+++.+.+. .++++|++-++.|.
T Consensus 105 ~~l~~li~~i~~~--~p~~~ii~~~~~p~ 131 (215)
T 2vpt_A 105 TGLSNLIDQIFTV--KPNVTLFVADYYPW 131 (215)
T ss_dssp HHHHHHHHHHHHH--CTTCEEEEECCCSC
T ss_pred HHHHHHHHHHHHh--CCCCEEEEEeCCCC
Confidence 4555566555542 35677888887764
No 20
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=32.21 E-value=15 Score=33.33 Aligned_cols=48 Identities=6% Similarity=0.034 Sum_probs=31.0
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEe
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQS 273 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT 273 (281)
.+|+||++.|.==... + ....+.|+.+++.+++-+.+. .++++|++-+
T Consensus 225 ~Pd~VvI~lG~ND~~~-----------~------~~~~~~~~~~l~~li~~ir~~--~p~~~I~l~~ 272 (347)
T 2waa_A 225 QPDLIISAIGTNDFSP-----------G------IPDRATYINTYTRFVRTLLDN--HPQATIVLTE 272 (347)
T ss_dssp CCSEEEECCCHHHHSS-----------S------CCCHHHHHHHHHHHHHHHHHH--CTTCEEEECC
T ss_pred CCCEEEEEccccCCCC-----------C------CCcHHHHHHHHHHHHHHHHHH--CCCCEEEEEe
Confidence 5899999999521110 0 023457888888888877663 3566777765
No 21
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=30.79 E-value=17 Score=33.21 Aligned_cols=28 Identities=4% Similarity=0.145 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCceEEEEe
Q 023524 244 LVALEKGLRTWANWVDNNIDRSKTRVFFQS 273 (281)
Q Consensus 244 ~~AyrkaL~t~~~wi~~~l~~~kt~VffRT 273 (281)
.+.|+.+++.+++-+.+. .++++|++-+
T Consensus 266 ~~~~~~~l~~li~~ir~~--~p~a~Iil~~ 293 (366)
T 2w9x_A 266 HADYVANYVKFVKQLHSN--NARAQFILMN 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHH--CTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCeEEEEe
Confidence 468889999998887663 3566777766
No 22
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=29.89 E-value=31 Score=31.41 Aligned_cols=25 Identities=24% Similarity=0.260 Sum_probs=20.8
Q ss_pred hc-CCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MK-GKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lr-gK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
++ |++|+|||| .-|...|++..+..
T Consensus 143 l~~gl~va~vGD--~~~va~Sl~~~~~~ 168 (307)
T 3tpf_A 143 QNGIAKVAFIGD--SNNMCNSWLITAAI 168 (307)
T ss_dssp GGGCCEEEEESC--SSHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcC--CCccHHHHHHHHHH
Confidence 56 999999999 35689999888864
No 23
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=29.23 E-value=18 Score=30.41 Aligned_cols=28 Identities=18% Similarity=0.241 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHhhCCCCCceEEEEecCCC
Q 023524 246 ALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 277 (281)
Q Consensus 246 AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP~ 277 (281)
.|+..|+.+++-+.+ ...++++-|..|.
T Consensus 109 ~~~~~l~~~i~~~~~----~g~~vil~tp~p~ 136 (233)
T 1k7c_A 109 TFPAYLENAAKLFTA----KGAKVILSSQTPN 136 (233)
T ss_dssp BHHHHHHHHHHHHHH----TTCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHH----CCCEEEEECCCCc
Confidence 577888888876644 2346777776664
No 24
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=28.69 E-value=32 Score=31.65 Aligned_cols=27 Identities=26% Similarity=0.295 Sum_probs=22.7
Q ss_pred HhcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 119 KMKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 119 ~lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
.+.|++|+||||-.+ |...|++..+..
T Consensus 158 ~l~gl~va~vGD~~~-~va~Sl~~~~~~ 184 (328)
T 3grf_A 158 GFKGIKFAYCGDSMN-NVTYDLMRGCAL 184 (328)
T ss_dssp TGGGCCEEEESCCSS-HHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCCc-chHHHHHHHHHH
Confidence 478999999999866 689999888764
No 25
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=28.46 E-value=16 Score=32.82 Aligned_cols=48 Identities=13% Similarity=0.076 Sum_probs=30.7
Q ss_pred CccEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEe
Q 023524 207 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQS 273 (281)
Q Consensus 207 ~~DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT 273 (281)
.+|+||++.|.==... + ....+.|+.+++.+++-|.+. .++++|++-+
T Consensus 213 ~PdlVvI~lGtND~~~-----------~------~~~~~~~~~~l~~li~~ir~~--~p~a~Iil~~ 260 (341)
T 2wao_A 213 VPQVVVINLGTNDFST-----------S------FADKTKFVTAYKNLISEVRRN--YPDAHIFCCV 260 (341)
T ss_dssp CCSEEEEECCHHHHSS-----------S------CCCHHHHHHHHHHHHHHHHHH--CTTCEEEEEE
T ss_pred CCCEEEEeCccccCCC-----------C------CCCHHHHHHHHHHHHHHHHHH--CCCCeEEEEe
Confidence 5899999999521110 0 022457788888888777653 3566787776
No 26
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=27.16 E-value=36 Score=31.83 Aligned_cols=26 Identities=27% Similarity=0.303 Sum_probs=21.7
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
++|++|+||||-.+ |...|++..+..
T Consensus 178 l~glkva~vGD~~n-nva~Sl~~~~~~ 203 (365)
T 4amu_A 178 LKNKKIVFIGDYKN-NVGVSTMIGAAF 203 (365)
T ss_dssp CTTCEEEEESSTTS-HHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCc-chHHHHHHHHHH
Confidence 67999999999766 588999888763
No 27
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=27.02 E-value=35 Score=31.00 Aligned_cols=27 Identities=26% Similarity=0.140 Sum_probs=21.6
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
++|++|+||||-..-|...|++..+..
T Consensus 145 l~glkva~vGD~~~~rva~Sl~~~~~~ 171 (304)
T 3r7f_A 145 FKGLTVSIHGDIKHSRVARSNAEVLTR 171 (304)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHH
Confidence 679999999997655678888877764
No 28
>3t6g_B Breast cancer anti-estrogen resistance protein 1; CDC25-homology domain, GTPase exchange factor, focal-adhesio targeting domain, signaling protein; 2.50A {Homo sapiens}
Probab=26.87 E-value=2.3 Score=37.40 Aligned_cols=15 Identities=27% Similarity=0.678 Sum_probs=13.0
Q ss_pred cCCeEEEEeccchhH
Q 023524 121 KGKTVMFVGDSLGLN 135 (281)
Q Consensus 121 rgK~i~FVGDSl~Rn 135 (281)
-+.+++||||.+.|+
T Consensus 145 sAHKLVfIGDTL~r~ 159 (229)
T 3t6g_B 145 SAHKLVFIGDTLSRQ 159 (229)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred EeeeeeeecchHHHh
Confidence 377899999999986
No 29
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=26.73 E-value=25 Score=32.34 Aligned_cols=48 Identities=10% Similarity=0.094 Sum_probs=29.9
Q ss_pred cEEEEcCccccccCCcccceeeEeeCceeeccCCHHHHHHHHHHHHHHHHHhhCCCCCceEEEEecCC
Q 023524 209 DVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISP 276 (281)
Q Consensus 209 DvlV~ntG~Ww~~~~~~~~~~y~~~g~~~~~~~~~~~AyrkaL~t~~~wi~~~l~~~kt~VffRT~SP 276 (281)
|+||+..|.-=... . .....+.|+..|+.+++-+.+. ..+|++-|.-|
T Consensus 232 d~VvI~~G~ND~~~----~------------~~~~~~~~~~~l~~ii~~lr~~----~a~vilvtP~~ 279 (375)
T 2o14_A 232 DYFMLQLGINDTNP----K------------HKESEAEFKEVMRDMIRQVKAK----GADVILSTPQG 279 (375)
T ss_dssp CEEEEECCTGGGCG----G------------GCCCHHHHHHHHHHHHHHHHTT----TCEEEEECCCC
T ss_pred CEEEEEEEccCCCc----c------------CCCCHHHHHHHHHHHHHHHHHC----CCEEEEECCCC
Confidence 99999999632211 0 0023567888888888877552 35677776444
No 30
>3ksx_A Nitrate transport protein; SSUA, alkanesulfonate-binding protein, periplasmic-binding P transport protein; HET: MPO; 1.70A {Xanthomonas axonopodis PV} PDB: 3e4r_A* 3ksj_A*
Probab=26.20 E-value=31 Score=30.04 Aligned_cols=23 Identities=26% Similarity=0.361 Sum_probs=16.4
Q ss_pred HhcCCeEEEEeccchhHHHHHHH
Q 023524 119 KMKGKTVMFVGDSLGLNQWESLI 141 (281)
Q Consensus 119 ~lrgK~i~FVGDSl~Rnq~~SLl 141 (281)
=|+||+|++...|.+...+..++
T Consensus 128 DLkGk~i~v~~gs~~~~~~~~~l 150 (324)
T 3ksx_A 128 DLKGKRIAFQKGSSAHNLLLRVL 150 (324)
T ss_dssp GGTTCEEEECTTSHHHHHHHHHH
T ss_pred HhCCCEEEecCCChHHHHHHHHH
Confidence 36899999987777666555544
No 31
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=25.27 E-value=43 Score=31.61 Aligned_cols=27 Identities=22% Similarity=0.347 Sum_probs=20.4
Q ss_pred hcCCeEEEEec---cchh--HHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGD---SLGL--NQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGD---Sl~R--nq~~SLlclL~~ 146 (281)
|+|++|++||| |.+| |...|++..+..
T Consensus 189 l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~ 220 (399)
T 3q98_A 189 LKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTR 220 (399)
T ss_dssp GTTCEEEEECCCCSSCCCCTHHHHHHHHHHGG
T ss_pred cCCCEEEEEEecccccCcchHHHHHHHHHHHH
Confidence 56889999998 3344 778898887764
No 32
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=24.39 E-value=40 Score=31.28 Aligned_cols=24 Identities=25% Similarity=0.317 Sum_probs=20.6
Q ss_pred cCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 121 KGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 121 rgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
+|++|+||||- .|...|++..+..
T Consensus 187 ~glkva~vGD~--~nva~Sl~~~l~~ 210 (353)
T 3sds_A 187 EGLKIAWVGDA--NNVLFDLAIAATK 210 (353)
T ss_dssp TTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCEEEEECCC--chHHHHHHHHHHH
Confidence 79999999997 4789999888764
No 33
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=24.10 E-value=28 Score=32.41 Aligned_cols=14 Identities=21% Similarity=0.228 Sum_probs=12.0
Q ss_pred CCeEEEEeccchhH
Q 023524 122 GKTVMFVGDSLGLN 135 (281)
Q Consensus 122 gK~i~FVGDSl~Rn 135 (281)
.++|+|+|||++..
T Consensus 185 ~~~Iv~~GDSiT~G 198 (385)
T 3skv_A 185 KPHWIHYGDSICHG 198 (385)
T ss_dssp CCEEEEEECSSCTT
T ss_pred CceEEEEeccccCC
Confidence 68999999999743
No 34
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=23.86 E-value=48 Score=31.56 Aligned_cols=27 Identities=22% Similarity=0.340 Sum_probs=21.1
Q ss_pred hcCCeEEEEec---cchh--HHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGD---SLGL--NQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGD---Sl~R--nq~~SLlclL~~ 146 (281)
++|++|++||| |.+| |...|++..+..
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~ 217 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTR 217 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGG
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHH
Confidence 56899999987 3456 788888887764
No 35
>1jb0_I Photosystem 1 reaction centre subunit VIII; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.17.1 PDB: 3pcq_I*
Probab=23.67 E-value=45 Score=21.13 Aligned_cols=19 Identities=16% Similarity=0.399 Sum_probs=13.2
Q ss_pred hhHHHHHHH-----HHHHHHhhcc
Q 023524 4 LFLKLLGSF-----LTILCLVLVK 22 (281)
Q Consensus 4 ~~~~~~~~~-----~~~~~~~~~~ 22 (281)
+|.||.|.+ .|.+++|.++
T Consensus 13 I~VPlVglvfPai~Mallf~yIe~ 36 (38)
T 1jb0_I 13 IFIPVVCWLMPTVVMGLLFLYIEG 36 (38)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHC
T ss_pred hhHhHHHHHHHHHHHHHHHHhhcc
Confidence 577888874 5667777764
No 36
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=23.58 E-value=49 Score=25.31 Aligned_cols=28 Identities=18% Similarity=0.176 Sum_probs=23.7
Q ss_pred HhcCCeEEEEecc--chhHHHHHHHHHhhh
Q 023524 119 KMKGKTVMFVGDS--LGLNQWESLICMIHA 146 (281)
Q Consensus 119 ~lrgK~i~FVGDS--l~Rnq~~SLlclL~~ 146 (281)
+|.|++++|-|.- +.|..++.++..+..
T Consensus 32 ~l~G~~~v~TG~l~~~~R~e~~~~i~~~Gg 61 (109)
T 2k6g_A 32 CLEGLIFVITGVLESIERDEAKSLIERYGG 61 (109)
T ss_dssp TTTTCEEEEESBCSSCCHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeeeCCCCCHHHHHHHHHHcCC
Confidence 5899999999964 689999999986653
No 37
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=23.28 E-value=46 Score=30.31 Aligned_cols=28 Identities=21% Similarity=0.093 Sum_probs=22.2
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhhc
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHAA 147 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~~ 147 (281)
++|++|++|||-..-|...|++..+..-
T Consensus 152 l~gl~va~vGD~~~~rva~Sl~~~~~~~ 179 (310)
T 3csu_A 152 LDNLHVAMVGDLKYGRTVHSLTQALAKF 179 (310)
T ss_dssp SSSCEEEEESCTTTCHHHHHHHHHHHTS
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHhC
Confidence 5799999999965546888998887643
No 38
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=23.18 E-value=49 Score=29.91 Aligned_cols=28 Identities=18% Similarity=0.241 Sum_probs=22.4
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhhc
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHAA 147 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~~ 147 (281)
++|++|++|||-..-|...|++..+..-
T Consensus 147 l~gl~va~vGD~~~~rva~Sl~~~~~~~ 174 (299)
T 1pg5_A 147 IDGLVFALLGDLKYARTVNSLLRILTRF 174 (299)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGGS
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHhC
Confidence 5799999999976556888998877643
No 39
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=22.16 E-value=38 Score=31.02 Aligned_cols=25 Identities=28% Similarity=0.449 Sum_probs=20.1
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
++|++|++|||- .|...|++-.+..
T Consensus 153 l~gl~va~vGD~--~~va~Sl~~~~~~ 177 (321)
T 1oth_A 153 LKGLTLSWIGDG--NNILHSIMMSAAK 177 (321)
T ss_dssp CTTCEEEEESCS--SHHHHHHHTTTGG
T ss_pred cCCcEEEEECCc--hhhHHHHHHHHHH
Confidence 579999999994 4788888877654
No 40
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=22.14 E-value=48 Score=30.14 Aligned_cols=25 Identities=36% Similarity=0.490 Sum_probs=20.9
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
++|++|+||||- -|...|++..+..
T Consensus 152 l~glkva~vGD~--~~va~Sl~~~~~~ 176 (309)
T 4f2g_A 152 IRGKTVAWVGDA--NNMLYTWIQAARI 176 (309)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--cchHHHHHHHHHH
Confidence 579999999994 5689999888864
No 41
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=21.79 E-value=49 Score=30.58 Aligned_cols=25 Identities=32% Similarity=0.444 Sum_probs=20.8
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
++|++|+||||- -|...|++..+..
T Consensus 177 l~glkva~vGD~--~nva~Sl~~~~~~ 201 (340)
T 4ep1_A 177 FKGIKLAYVGDG--NNVCHSLLLASAK 201 (340)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--chhHHHHHHHHHH
Confidence 679999999996 5588899888764
No 42
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=21.51 E-value=50 Score=30.24 Aligned_cols=25 Identities=28% Similarity=0.349 Sum_probs=20.6
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
++|++|++|||- -|...|++..+..
T Consensus 155 l~glkva~vGD~--~rva~Sl~~~~~~ 179 (323)
T 3gd5_A 155 LAGLKLAYVGDG--NNVAHSLLLGCAK 179 (323)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--CcHHHHHHHHHHH
Confidence 579999999997 6778888887753
No 43
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=21.15 E-value=54 Score=29.75 Aligned_cols=27 Identities=26% Similarity=0.331 Sum_probs=21.4
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
+.|++|++|||-..-|...|++..+..
T Consensus 149 l~glkva~vGD~~~~rva~Sl~~~~~~ 175 (306)
T 4ekn_B 149 IDGIKIAFVGDLKYGRTVHSLVYALSL 175 (306)
T ss_dssp STTCEEEEESCTTTCHHHHHHHHHHHT
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHh
Confidence 579999999996544688888887754
No 44
>1oeg_A Apolipoprotein E; sialic acid, heparin-binding, repeat, signal, disease mutation, polymorphism; NMR {Homo sapiens} SCOP: j.39.1.1
Probab=20.98 E-value=51 Score=19.15 Aligned_cols=17 Identities=29% Similarity=0.448 Sum_probs=14.0
Q ss_pred hhHHHHHHHHHhhhcCC
Q 023524 133 GLNQWESLICMIHAAAP 149 (281)
Q Consensus 133 ~Rnq~~SLlclL~~~~~ 149 (281)
.|+||+.|+.-+..+..
T Consensus 6 mr~Q~~~lveKvq~a~~ 22 (26)
T 1oeg_A 6 MQRQWAGLVEKVQAAVG 22 (26)
T ss_dssp TTTHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 58999999998876654
No 45
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=20.65 E-value=53 Score=30.30 Aligned_cols=25 Identities=28% Similarity=0.316 Sum_probs=20.8
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
++|++|+||||- -|...|++..+..
T Consensus 173 l~glkva~vGD~--~rva~Sl~~~~~~ 197 (339)
T 4a8t_A 173 LEDCKVVFVGDA--TQVCFSLGLITTK 197 (339)
T ss_dssp GGGCEEEEESSC--CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--chhHHHHHHHHHH
Confidence 678999999997 6778888887764
No 46
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=20.44 E-value=55 Score=29.98 Aligned_cols=26 Identities=35% Similarity=0.470 Sum_probs=20.5
Q ss_pred hcCCeEEEEeccchhHHHHHHHHHhhh
Q 023524 120 MKGKTVMFVGDSLGLNQWESLICMIHA 146 (281)
Q Consensus 120 lrgK~i~FVGDSl~Rnq~~SLlclL~~ 146 (281)
++|++|++|||- --|...|++..+..
T Consensus 165 l~gl~va~vGD~-~~rva~Sl~~~~~~ 190 (325)
T 1vlv_A 165 LKGVKVVFMGDT-RNNVATSLMIACAK 190 (325)
T ss_dssp STTCEEEEESCT-TSHHHHHHHHHHHH
T ss_pred cCCcEEEEECCC-CcCcHHHHHHHHHH
Confidence 568999999993 23788888888764
Done!