BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023527
(281 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65717|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana
GN=CNGC1 PE=1 SV=1
Length = 716
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 85/123 (69%), Gaps = 6/123 (4%)
Query: 154 ILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVT 213
++ V F +D L+ LCD ++P ++TE SYI++E +P+D+MLF+++GKL T T+
Sbjct: 481 LMRVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTN--- 537
Query: 214 ELSSNSGNLNN-HLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDL 272
+G LN+ +L GDF GEEL+ WA H+SSNLPIST+T++AL +VEAF L A DL
Sbjct: 538 --GGRTGFLNSEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDL 595
Query: 273 KQV 275
K V
Sbjct: 596 KFV 598
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 10 LKVIRLAKLITEWKNSYNLNKWANLTFN-FGYLQAANVFGSLWYFFAVQRKAECWKKACT 68
+++ L K +T WA FN F Y+ A++VFG+ WY F+++R+ CWK+AC
Sbjct: 235 IRIYPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACE 294
Query: 69 -DFTRCDFLPLHCD-DSLTNYTFFSDFCSTKTQNATIYDFGIFRDAIQSGVLDQNYFFRR 126
+ C L+CD ++ F ++ C +T N T++DFGIF DA+QSGV++ F ++
Sbjct: 295 RNNPPCISKLLYCDPETAGGNAFLNESCPIQTPNTTLFDFGIFLDALQSGVVESQDFPQK 354
Query: 127 YLPCFQWSLQAL 138
+ CF W LQ L
Sbjct: 355 FFYCFWWGLQNL 366
>sp|Q9LNJ0|CNG10_ARATH Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis
thaliana GN=CNGC10 PE=2 SV=2
Length = 711
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 79/120 (65%), Gaps = 6/120 (5%)
Query: 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELS 216
V F +D L+ +CD ++P ++TE SY+I+E +P+ +MLFV++G+L + T+
Sbjct: 471 VPLFEIMDEQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTN-----G 525
Query: 217 SNSGNLNN-HLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQV 275
SG N +L+ DF GE+L+ WA +SS+ PIST+T+QALT+VEAF L A DLK V
Sbjct: 526 GRSGFFNAVNLKASDFCGEDLLPWALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSV 585
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
Query: 5 LVQHGLKVIRLAKLITEWKNSYNL---NKWANLTFNFG-YLQAANVFGSLWYFFAVQRKA 60
+ Q+ +++R+ L TE + + WA +N Y+ A++VFG+LWY +V+R+
Sbjct: 211 IAQYVPRILRMYPLYTEVTRTSGIVTETAWAGAAWNLSLYMLASHVFGALWYLISVERED 270
Query: 61 ECWKKACTDFTRCDFLPLHCD-DSLTNYTFFSDFC----STKTQNATIYDFGIFRDAIQS 115
CW++AC C+ L+C+ D + F + C N+TI++FGIF DA++S
Sbjct: 271 RCWQEACEKTKGCNMKFLYCENDRNVSNNFLTTSCPFLDPGDITNSTIFNFGIFTDALKS 330
Query: 116 GVLDQNYFFRRYLPCFQWSLQAL 138
GV++ + F++++ CF W L+ L
Sbjct: 331 GVVESHDFWKKFFYCFWWGLRNL 353
>sp|O82226|CNGC6_ARATH Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis
thaliana GN=CNGC6 PE=1 SV=2
Length = 747
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 82/120 (68%), Gaps = 6/120 (5%)
Query: 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELS 216
V F N+D L+ +C+ +KP +FTE+SY+++E +P+++MLF+++G+L + VT
Sbjct: 512 VPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLES-----VTTDG 566
Query: 217 SNSGNLNNHL-EGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQV 275
SG N L + GDF G+EL+ WA + SNLP ST+T++ALT+VEAF L+A +LK V
Sbjct: 567 GRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFV 626
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 3 LFLVQHGLKVIRLAKLITEWKNSYNL---NKWANLTFNFG-YLQAANVFGSLWYFFAVQR 58
+ LVQ+ + +R+ L +E K + + WA + Y+ A+++ G+LWY A++R
Sbjct: 244 IVLVQYIPRFLRMYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGALWYLLALER 303
Query: 59 KAECWKKACTDFTRCDFLPLHC-----------DDSLTNYTFFSDFCSTKTQNATIYDFG 107
+CW KAC + C L C D+ +Y + +DFG
Sbjct: 304 NNDCWSKACHNNQNCTRNFLFCGNQNMKGYAAWDNIKVSYLQLKCPVNVPEDEEPPFDFG 363
Query: 108 IFRDAIQSGVLDQNYFFRRYLPCFQWSLQAL 138
I+ A+ SG++ F +Y C W LQ L
Sbjct: 364 IYLRALSSGIVSSKNFVSKYFFCLWWGLQNL 394
>sp|Q9S9N5|CNGC7_ARATH Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis
thaliana GN=CNGC7 PE=2 SV=1
Length = 738
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 6/120 (5%)
Query: 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELS 216
V F N+D L+ +C+ +KP++FTE +YI++E +P+++M+F+++G+L + VT
Sbjct: 500 VPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLES-----VTTDG 554
Query: 217 SNSGNLNNHL-EGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQV 275
SG N L + GDF GEEL+ WA SNLP ST+T++ALT+VEAF L A +LK V
Sbjct: 555 GRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFV 614
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 1 MNLFLVQHGLKVIRLAKLITEWK---NSYNLNKWANLTFNF-GYLQAANVFGSLWYFFAV 56
+N+ +VQ+ + +R L +E K ++ WA + Y+ A+++ G+ WY +V
Sbjct: 230 LNIVIVQYIPRFVRFIPLTSELKKTAGAFAEGAWAGAAYYLLWYMLASHITGAFWYMLSV 289
Query: 57 QRKAECWKKAC---TDFTRCDFLPLHCDDSL----------TNYTFFSDFCSTKTQNATI 103
+R CW+ AC D C + L+C T CS K ++
Sbjct: 290 ERNDTCWRFACKVQPDPRLCVQI-LYCGTKFVSSGETEWIKTVPELLKSNCSAKADDSK- 347
Query: 104 YDFGIFRDAIQSGVLDQNYFFRRYLPCFQWSLQAL 138
+++GI+ AI SG++ FF ++ C W LQ L
Sbjct: 348 FNYGIYGQAISSGIVSSTTFFSKFCYCLWWGLQNL 382
>sp|Q9FXH6|CNGC8_ARATH Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis
thaliana GN=CNGC8 PE=3 SV=2
Length = 753
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 6/120 (5%)
Query: 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELS 216
V F N+D L+ +C+ +KP+++TE +YI++E +P+++MLF+++G+L + VT
Sbjct: 506 VPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLES-----VTTDG 560
Query: 217 SNSGNLNNHL-EGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQV 275
SG N L + GDF GEEL+ WA SNLP ST+T++ALT+VEAF L A +LK V
Sbjct: 561 GRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFV 620
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 1 MNLFLVQHGLKVIRLAKLITEWK---NSYNLNKWANLTFNF-GYLQAANVFGSLWYFFAV 56
+++ + Q+ + +R L +E K ++ WA + Y+ A+++ G+ WY +V
Sbjct: 236 LHIVITQYIPRFVRFIPLTSELKKTAGAFAEGAWAGAAYYLLWYMLASHITGAFWYMLSV 295
Query: 57 QRKAECWKKAC---TDFTRCDFLPLHCDDSLTNYT----------FFSDFCSTKTQNATI 103
+R C + AC D C + L+C L + F + CS K+ +
Sbjct: 296 ERNDTCLRSACKVQPDPKVCVQI-LYCGSKLMSSRETDWIKSVPDLFKNNCSAKSDESK- 353
Query: 104 YDFGIFRDAIQSGVLDQNYFFRRYLPCFQWSLQAL 138
+++GI+ A+ SG++ FF ++ C W LQ L
Sbjct: 354 FNYGIYSQAVSSGIVSSTTFFSKFCYCLWWGLQNL 388
>sp|Q9LD40|CNG13_ARATH Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis
thaliana GN=CNGC13 PE=3 SV=2
Length = 696
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 79/120 (65%), Gaps = 6/120 (5%)
Query: 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELS 216
V F +D L+ +CD +KP ++TE SY I+E +P+++MLFV++GKL + T+
Sbjct: 472 VPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTN-----G 526
Query: 217 SNSGNLNN-HLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQV 275
+G N +L+ DF GE+L+ WA +SS+ PIST+T+QALT+VEAF L A DLK V
Sbjct: 527 GRTGFFNAVYLKPSDFCGEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLV 586
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 86/151 (56%), Gaps = 16/151 (10%)
Query: 1 MNLFLVQHGLKVIRLAKLITEWKNSYNL---NKWANLTFNFG-YLQAANVFGSLWYFFAV 56
+ + Q+ +++R+ L TE + + WA +N Y+ A++VFG+LWY +V
Sbjct: 207 ITVIFTQYIPRILRIYPLYTEVTRTSGIVTETAWAGAAWNLSLYMLASHVFGALWYLISV 266
Query: 57 QRKAECWKKACTDFTR-CDFLPLHCDDSLTNYTFFSDFCSTK--------TQNATIYDFG 107
+R+ CW++AC C+F L+CD N + +DF +T N+T+++FG
Sbjct: 267 EREDRCWREACEKIPEVCNFRFLYCDG---NSSVRNDFLTTSCPFINPDDITNSTVFNFG 323
Query: 108 IFRDAIQSGVLDQNYFFRRYLPCFQWSLQAL 138
IF DA++SG+++ + F++++ CF W L+ L
Sbjct: 324 IFTDALKSGIVESDDFWKKFFYCFWWGLRNL 354
>sp|Q9M0A4|CNGC9_ARATH Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis
thaliana GN=CNGC9 PE=1 SV=1
Length = 733
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 6/120 (5%)
Query: 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELS 216
V F N+D L+ +C+ +KP ++TE SY+++E +P+++MLF+++G+L + VT
Sbjct: 511 VPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLES-----VTTDG 565
Query: 217 SNSGNLNNHL-EGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQV 275
SG N L + GDF GEEL+ WA + SNLP ST+T +ALT+VEAF L+A +LK V
Sbjct: 566 GRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELKFV 625
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 2 NLFLVQHGLKVIRLAKLITEWKNSYNL---NKWANLTFNFG-YLQAANVFGSLWYFFAVQ 57
++ LVQ+ + IRL L +E K + + WA + Y+ A+++ G++WY A++
Sbjct: 243 SIILVQYIPRFIRLYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAIWYLLALE 302
Query: 58 RKAECWKKACTDFT-RCDFLPLHCD----DSLTNYTFFSDF-----CSTKTQNATIYDFG 107
R CW K C++ + C L C D +T D C T + +DFG
Sbjct: 303 RYNGCWTKVCSNSSLDCHRNFLFCGNEKMDGYAAWTTIKDSVLQLNCPVNTTDNPPFDFG 362
Query: 108 IFRDAIQSGVLDQNYFFRRYLPCFQWSLQAL 138
I+ A+ SG++ F +Y C W LQ L
Sbjct: 363 IYLRALSSGIVSSKSFVSKYFFCLWWGLQNL 393
>sp|Q8RWS9|CNGC5_ARATH Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis
thaliana GN=CNGC5 PE=2 SV=1
Length = 717
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Query: 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELS 216
V F ++D L+ +C +KP +FTE +Y+++E +P+D+MLF+++G+L + VT
Sbjct: 496 VPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLES-----VTTDG 550
Query: 217 SNSGNLNNHL-EGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQV 275
SG N L + G+F GEEL+ WA + NLP ST+T++ALT+VEAF L + +LK V
Sbjct: 551 GRSGFFNRSLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEELKFV 610
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 3 LFLVQHGLKVIRLAKLITEWKNSYNL---NKWANLTFNFG-YLQAANVFGSLWYFFAVQR 58
+ LVQ+ + +R+ L +E K + + WA + Y+ A+++ G+ WY A++R
Sbjct: 229 IVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLALER 288
Query: 59 KAECWKKACTDFTRCDFLPLHC-DDSLTNYTFF---------SDFCSTKTQNATIYDFGI 108
CW++AC D C L+C + ++ Y + S + N +DFGI
Sbjct: 289 NDACWQEACIDAGNCSTDFLYCGNQNMDGYAVWNRAKESVLKSKCRADLDDNNPPFDFGI 348
Query: 109 FRDAIQSGVLDQNYFFRRYLPCFQWSLQAL 138
+ A+ SG++ F +Y C W LQ L
Sbjct: 349 YTQALSSGIVSSQNFIVKYCYCLWWGLQNL 378
>sp|Q9SU64|CNG16_ARATH Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis
thaliana GN=CNGC16 PE=2 SV=1
Length = 705
Score = 90.9 bits (224), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Query: 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELS 216
V F +D L+ +C+ + P++ T+ +Y+I+E +P+++MLF+++G++ + T+
Sbjct: 455 VPFFAQMDDQLLDAICERLVPSLNTKDTYVIREGDPVNEMLFIIRGQMESSTTD-----G 509
Query: 217 SNSGNLNN-HLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQV 275
SG N+ L GDF GEEL+ WA + + NLP+ST+T++ L++VEAF L A DLK V
Sbjct: 510 GRSGFFNSITLRPGDFCGEELLTWALVPNINHNLPLSTRTVRTLSEVEAFALRAEDLKFV 569
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query: 31 WANLTFNFG-YLQAANVFGSLWYFFAVQRKAECWKKAC------TDFTRCDFLPLHCDD- 82
W+ +N YL ++V GS+WY ++QR+ ECW++ C T C L L C
Sbjct: 217 WSGAAYNLILYLLVSHVLGSVWYVLSIQRQHECWRRECIKEMNATHSPSCSLLFLDCGSL 276
Query: 83 ------SLTNYTFFSDFCSTKTQNATIYDFGIFRDAIQSGVLDQNYFFRRYLPCFQWSLQ 136
+ T C + + + FG+F DA + V + FF +Y C W L+
Sbjct: 277 HDPGRQAWMRITRVLSNCDARNDDDQHFQFGMFGDAFTNDV-TSSPFFDKYFYCLWWGLR 335
Query: 137 AL 138
L
Sbjct: 336 NL 337
>sp|Q9SJA4|CNG14_ARATH Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis
thaliana GN=CNGC14 PE=2 SV=2
Length = 726
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 78/125 (62%), Gaps = 6/125 (4%)
Query: 152 DPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRR 211
D + V F +D L+ +C+ + ++ T+ +YI++E +P+ +MLF+++GKL + T+
Sbjct: 474 DLVRRVPLFAQMDDQLLDAICERLASSLSTQGNYIVREGDPVTEMLFIIRGKLESSTTN- 532
Query: 212 VTELSSNSGNLNN-HLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAY 270
+G N+ L GDF GEEL+AWA ++ NLP ST+T++AL +VEAF L A
Sbjct: 533 ----GGRTGFFNSITLRPGDFCGEELLAWALLPKSTVNLPSSTRTVRALEEVEAFALQAG 588
Query: 271 DLKQV 275
DLK V
Sbjct: 589 DLKFV 593
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 31 WANLTFNF-GYLQAANVFGSLWYFFAVQRKAECWKKAC----------TDFTRCDFLPLH 79
WA +N Y+ A+++ GS WY +++R+A CWK C TDF C LH
Sbjct: 246 WAGAAYNLLQYMLASHILGSAWYLLSIERQATCWKAECHKESVPLQCVTDFFDCG--TLH 303
Query: 80 CDDSLTNYTFFSDFCSTKTQNATIYDFGIFRDAIQSGVLDQNYFFRRYLPCFQWSLQAL 138
DD F + N + FGIF DA+ V+ + F +YL C + LQ L
Sbjct: 304 RDDRNNWQNTTVVFSNCDPSNNIQFTFGIFADALTKNVVS-SPFLEKYLYCLWFGLQNL 361
>sp|Q9SL29|CNG15_ARATH Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis
thaliana GN=CNGC15 PE=3 SV=1
Length = 678
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 78/125 (62%), Gaps = 6/125 (4%)
Query: 152 DPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRR 211
D + V F +D L+ +C+ +KPA+ TE +++++E +P+++MLF+++G L +YT+
Sbjct: 464 DLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTN- 522
Query: 212 VTELSSNSGNLNNHLEG-GDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAY 270
+G N+ L G GDF GEEL+ WA LP ST+T++A+ +VEAF L A
Sbjct: 523 ----GGRTGFFNSCLIGPGDFCGEELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAE 578
Query: 271 DLKQV 275
DL+ V
Sbjct: 579 DLQFV 583
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 11 KVIRLAKLITEWKNSYNLNKWANLTFNFG-YLQAANVFGSLWYFFAVQRKAECWKKAC-T 68
++I+ ++TE WA +N Y+ A++V G+ WY AV+R+ CW+ AC
Sbjct: 226 QIIKATGVVTE-------TAWAGAAYNLMLYMLASHVLGACWYLLAVERQEACWRHACNI 278
Query: 69 DFTRCDFLPLHC---DDSLTNYTF-FSDFCSTKTQNATIYDFGIFRDAIQSGVLDQNYFF 124
+ C + C +D N F +S+ + + Y+FGIF DA+ S V F
Sbjct: 279 EKQICQYRFFECRRLEDPQRNSWFEWSNITTICKPASKFYEFGIFGDAVTSTVTSSK-FI 337
Query: 125 RRYLPCFQWSLQAL 138
+Y C W L+ L
Sbjct: 338 NKYFYCLWWGLKNL 351
>sp|Q9SKD7|CNGC3_ARATH Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis
thaliana GN=CNGC3 PE=2 SV=2
Length = 706
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 13/134 (9%)
Query: 11 KVIRLAKLITEWKNSYNLNKWANLTFN-FGYLQAANVFGSLWYFFAVQRKAECWKKACTD 69
+V R + L+TE WA N F Y+ A++VFGS WY +++RK CW++AC
Sbjct: 231 EVTRTSGLVTE-------TAWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWREACAK 283
Query: 70 FTRCDFLPLHCDDS-LTNYTFFSDFC----STKTQNATIYDFGIFRDAIQSGVLDQNYFF 124
C L+C + N F + C + N+T+++FGIF DA+QSGV++ F
Sbjct: 284 IQNCTHAYLYCSPTGEDNRLFLNGSCPLIDPEEITNSTVFNFGIFADALQSGVVESRDFP 343
Query: 125 RRYLPCFQWSLQAL 138
+++ CF W L+ L
Sbjct: 344 KKFFYCFWWGLRNL 357
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 73/120 (60%), Gaps = 8/120 (6%)
Query: 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELS 216
V F +D L+ LC +K ++TE+SYI++E P++ MLF+++G L + T+
Sbjct: 475 VPWFQAMDDRLLDALCARLKTVLYTEKSYIVREGEPVEDMLFIMRGNLISTTT-----YG 529
Query: 217 SNSGNLNN-HLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQV 275
+G N+ L GDF G +L+ WA SS PIS++T+QALT+VE F+L A DLK V
Sbjct: 530 GRTGFFNSVDLVAGDFCG-DLLTWA-LDPLSSQFPISSRTVQALTEVEGFLLSADDLKFV 587
>sp|Q9LEQ3|CNG18_ARATH Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis
thaliana GN=CNGC18 PE=3 SV=1
Length = 706
Score = 84.3 bits (207), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 75/120 (62%), Gaps = 6/120 (5%)
Query: 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELS 216
V F +D L+ +C + ++ T +YI +E +P+++MLFV++G++ + T+
Sbjct: 447 VPFFSQMDDQLLDAICGCLVSSLSTAGTYIFREGDPVNEMLFVIRGQIESSTTN-----G 501
Query: 217 SNSGNLNNH-LEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQV 275
SG N+ L GDF GEEL+ WA +++ NLP ST++++AL++VEAF L A DLK V
Sbjct: 502 GRSGFFNSTTLRPGDFCGEELLTWALMPNSTLNLPSSTRSVRALSEVEAFALSAEDLKFV 561
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 15/121 (12%)
Query: 31 WANLTFNFG-YLQAANVFGSLWYFFAVQRKAECWKKAC------------TDFTRCDFLP 77
WA +N Y+ A++V G++WY ++ R+ CW C F C L
Sbjct: 211 WAGAAYNLLLYILASHVLGAMWYLSSIGRQFSCWSNVCKKDNALRVLDCLPSFLDCKSLE 270
Query: 78 LHCDDSLTNYTFFSDFCSTKTQNATIYDFGIFRDAIQSGVLDQNYFFRRYLPCFQWSLQA 137
N T C T + T + FG+F +A + V + F +YL C W L+
Sbjct: 271 QPERQYWQNVTQVLSHCDA-TSSTTNFKFGMFAEAFTTQVATTD-FVSKYLYCLWWGLRN 328
Query: 138 L 138
L
Sbjct: 329 L 329
>sp|Q8L7Z0|CNG17_ARATH Probable cyclic nucleotide-gated ion channel 17 OS=Arabidopsis
thaliana GN=CNGC17 PE=2 SV=1
Length = 720
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 77/125 (61%), Gaps = 6/125 (4%)
Query: 152 DPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRR 211
D + V F +D L+ +C+ + ++ TE +Y+++E + I +MLF+++G+L + T+
Sbjct: 474 DLVRRVPFFSQMDDQLLDAICERLVSSLCTEGTYLVREGDLISEMLFIIRGRLESSTTN- 532
Query: 212 VTELSSNSGNLNNH-LEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAY 270
+G N+ L GDF GEEL++WA ++ NLP ST+T++AL +VEAF L A
Sbjct: 533 ----GGRTGFFNSIILRPGDFCGEELLSWALLPKSTLNLPSSTRTVRALVEVEAFALRAE 588
Query: 271 DLKQV 275
DLK V
Sbjct: 589 DLKFV 593
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 55/138 (39%), Gaps = 15/138 (10%)
Query: 12 VIRLAKLITEWKNSYNLNKWANLTFNFG-YLQAANVFGSLWYFFAVQRKAECWKKAC--- 67
+I L+ I + WA +N Y+ A++V G+ WY +V R CWK C
Sbjct: 228 IIPLSSQIVKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYILSVDRYTSCWKSRCNGE 287
Query: 68 TDFTRCDFLPLHCDD-------SLTNYTFFSDFCSTKTQNATIYDFGIFRDAIQSGVLDQ 120
C L CD + N T C + + +GIF +AI V+
Sbjct: 288 AGQVNCQLYYLDCDSMYDNNQMTWANVTKVFKLCDARNGE---FKYGIFGNAITKNVVSS 344
Query: 121 NYFFRRYLPCFQWSLQAL 138
FF RY C W LQ L
Sbjct: 345 Q-FFERYFYCLWWGLQQL 361
>sp|Q8GWD2|CNG12_ARATH Probable cyclic nucleotide-gated ion channel 12 OS=Arabidopsis
thaliana GN=CNGC12 PE=2 SV=2
Length = 649
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 13/147 (8%)
Query: 3 LFLVQHGLKVIRLAKLITEWKNSYNL---NKWANLTFN-FGYLQAANVFGSLWYFFAVQR 58
+ L Q+ ++IR+ L E ++ +KWA N F Y+ + VFG+ WY +++R
Sbjct: 167 IILSQYVPRIIRMYPLYKEVTRAFGTVAESKWAGAALNLFLYMLHSYVFGAFWYLSSIER 226
Query: 59 KAECWKKACTDFTRCDF--LPLHCDDSLT-NYTFFSDFC----STKTQNATIYDFGIFRD 111
K++CW+ AC + C+ L C + + N F + C + N+T +DFG++ D
Sbjct: 227 KSKCWRAACARTSDCNLTVTDLLCKRAGSDNIRFLNTSCPLIDPAQITNSTDFDFGMYID 286
Query: 112 AIQSGVLD--QNYFFRRYLPCFQWSLQ 136
A++SGVL+ F R+++ CF W L+
Sbjct: 287 ALKSGVLEVKPKDFPRKFVYCFWWGLR 313
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
Query: 164 DGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLN 223
DG LE +CD VK + S+I++E +P+++ML V +GKL + T S G N
Sbjct: 441 DGWLLEAVCDRVKSVFYLANSFIVREGHPVEEMLIVTRGKLKSTTG------SHEMGVRN 494
Query: 224 N--HLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLK 273
N L+ GD GE L N S LP ST+T+ LT+VE F+L+ D+K
Sbjct: 495 NCCDLQDGDICGELLF-------NGSRLPTSTRTVMTLTEVEGFILLPDDIK 539
>sp|Q9SKD6|CNG11_ARATH Cyclic nucleotide-gated ion channel 11 OS=Arabidopsis thaliana
GN=CNGC11 PE=2 SV=2
Length = 621
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 163 LDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNL 222
+D L+ LC +K +TE+SYI++E P++ MLF+++G L + T+ +G
Sbjct: 439 MDDQLLDALCARLKTVHYTEKSYIVREGEPVEDMLFIMRGNLISTTT-----YGGRTGFF 493
Query: 223 NN-HLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQV 275
N+ L GD G +L+ WA SS PIS++T+QALT+VE FV+ A DLK V
Sbjct: 494 NSVDLIAGDSCG-DLLTWALYSL-SSQFPISSRTVQALTEVEGFVISADDLKFV 545
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 13/147 (8%)
Query: 3 LFLVQHGLKVIRLAKLITEWKNSYNL---NKWANLTFNFG-YLQAANVFGSLWYFFAVQR 58
+ L Q+ ++IR+ L E ++ +K NF Y+ + V G+ WY +++R
Sbjct: 167 IILSQYVPRIIRMYPLYKEVTRAFGTVAESKRVGAALNFFLYMLHSYVCGAFWYLSSIER 226
Query: 59 KAECWKKACTDFTRCDF--LPLHCDDSLT-NYTFFSDFC----STKTQNATIYDFGIFRD 111
K+ CW+ AC + C+ L C + + N F + C + N+T +DFG++ D
Sbjct: 227 KSTCWRAACARTSDCNLTVTDLLCKRAGSDNIRFLNTSCPLIDPAQITNSTDFDFGMYID 286
Query: 112 AIQSGVLD--QNYFFRRYLPCFQWSLQ 136
A++SGVL+ F R+++ CF W L+
Sbjct: 287 ALKSGVLEVKPKDFPRKFVYCFWWGLR 313
>sp|O65718|CNGC2_ARATH Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana
GN=CNGC2 PE=1 SV=1
Length = 726
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELS 216
V F +D L+ +CD KP VF++ II+E +P+ +M+F+++G++ +R+ LS
Sbjct: 529 VPLFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRV-----KRIQSLS 583
Query: 217 SNSGNL-NNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQV 275
G L + LE G + G+EL++W LP S+ T L +EAF L + DL+ +
Sbjct: 584 --KGVLATSTLEPGGYLGDELLSWCLRRPFLDRLPPSSATFVCLENIEAFSLGSEDLRYI 641
Score = 38.5 bits (88), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Query: 31 WANLTFNF-GYLQAANVFGSLWYFFAVQRKAECWKKACTDFTRCDFLPLHCDDSLTNYTF 89
W N Y A++V G WY A+QR A C ++ C C+ L L C + + Y F
Sbjct: 290 WWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRTGNCN-LSLACKEEVC-YQF 347
Query: 90 FSDFCSTKTQNATIYDFGIFRDAIQSGVLDQNYFFRRYLPCFQWSLQAL 138
S T T + + LD N FR + ++W+L +
Sbjct: 348 VS---PTSTVGYPCLSGNLTSVVNKPMCLDSNGPFRYGI--YRWALPVI 391
>sp|Q94AS9|CNGC4_ARATH Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana
GN=CNGC4 PE=2 SV=2
Length = 694
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 152 DPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRR 211
D + V F ++D LE +CD VK +FT+ I +E + + +MLFV++G L +
Sbjct: 489 DLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHL------Q 542
Query: 212 VTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYD 271
++L + L G+FSG+EL++W LP S+ T+ L EAF L A D
Sbjct: 543 SSQLLRDGVKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAED 602
Query: 272 LKQV 275
+K V
Sbjct: 603 VKYV 606
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 31 WANLTFNF-GYLQAANVFGSLWYFFAVQRKAECWKKACTDFTRCDFLPLHCDDSL 84
W + N Y AA+ G+ WY VQR A+C K+ C + CD L C + +
Sbjct: 258 WWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDLRMLSCKEPV 312
>sp|Q9LD37|CNG20_ARATH Probable cyclic nucleotide-gated ion channel 20, chloroplastic
OS=Arabidopsis thaliana GN=CNGC20 PE=2 SV=1
Length = 764
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 29 NKWANLTFNF-GYLQAANVFGSLWYFFAVQRKAECWKKACTDFTR-CDFLPLHCDDSLTN 86
+ WAN N ++ A +V GS WY F +QR +C + AC +F R C L + C + ++
Sbjct: 362 SAWANFVINLLTFMLAGHVVGSCWYLFGLQRVNQCLRNACGNFGRECQDL-IDCGNGNSS 420
Query: 87 YTFFSDFCSTKTQNATI----YDFGIFRDAIQSGVLDQNYFFRRYLPCFQWSLQAL 138
+ + + NA + +GI+ A+ + + + F RY W Q +
Sbjct: 421 VLVRATWKDNASANACFQEDGFPYGIYLKAVN--LTNHSNLFTRYSYSLFWGFQQI 474
Score = 38.9 bits (89), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELS 216
V F +D L+ + + +K + S ++ +++M+F+++G++ E
Sbjct: 591 VRIFSLMDEPILDAIRERLKQRTYIGSSTVLHRGGLVEKMVFIVRGEM---------ESI 641
Query: 217 SNSGNLNNHLEGGDFSGEELIAWA--KAGHNSSN----LP----ISTKTIQALTKVEAFV 266
G++ EG D GEEL+ W ++ N +P +S++ ++ +T VEAF
Sbjct: 642 GEDGSVLPLYEG-DVCGEELLTWCLERSSVNPDGTRIRMPSKGLLSSRNVRCVTNVEAFS 700
Query: 267 LMAYDLKQV 275
L DL+ V
Sbjct: 701 LSVADLEDV 709
>sp|Q9LDR2|CNG19_ARATH Putative cyclic nucleotide-gated ion channel 19 OS=Arabidopsis
thaliana GN=CNGC19 PE=3 SV=1
Length = 729
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELS 216
V F +D S L+ + + +K + S ++ +++M+F+++G++ E
Sbjct: 558 VRIFSLMDESVLDSIRERLKQRTYIRSSTVLHHRGLVEKMVFIVRGEM---------ESI 608
Query: 217 SNSGNLNNHLEGGDFSGEELIAWAKAGHNSSN----LP----ISTKTIQALTKVEAFVLM 268
G++ L GD GEEL+ W + N +P +S + ++ +T VEAF L
Sbjct: 609 GEDGSVLP-LSEGDVCGEELLTWCLSSINPDGTRIKMPPKGLVSNRNVRCVTNVEAFSLS 667
Query: 269 AYDLKQV 275
DL+ V
Sbjct: 668 VADLEDV 674
Score = 31.2 bits (69), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 5 LVQHGLKVIRLAKLITEWKNSYNL--NKWANLTFNF-GYLQAANVFGSLWYFFAVQRKAE 61
L Q+ K+ RL L+ ++ + + WAN N ++ A + GS WY A+QR +
Sbjct: 302 LFQYIPKLYRLLPLLAGQTSTGFIFESAWANFVINLLTFMLAGHAVGSCWYLSALQRVKK 361
Query: 62 C 62
C
Sbjct: 362 C 362
>sp|Q8MM62|PDE6_DICDI cAMP/cGMP-dependent 3',5'-cAMP/cGMP phosphodiesterase B
OS=Dictyostelium discoideum GN=pdeE PE=1 SV=1
Length = 1096
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 55/115 (47%), Gaps = 13/115 (11%)
Query: 162 NLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGN 221
+++ ++ + + K F I E + D M + QG++ + S + N
Sbjct: 949 HINKEEVDSIANGSKDVSFAHHQVIFNEGDTSDSMYIIKQGRVRIH--------SKKNKN 1000
Query: 222 LNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVL 276
+ +L GDF GE A+ ++ +S+ LP T++ A T ++ +L+ D++ ++
Sbjct: 1001 IIRYLNVGDFFGE--TAYRRSNEDSNFLP--TRSFTA-TAIDPTILLKLDIESIV 1050
>sp|Q64359|CNGA4_RAT Cyclic nucleotide-gated cation channel alpha-4 OS=Rattus norvegicus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 139 RLRLTFILSNKHKDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLF 198
RLR +S H + V+ F N + S LE+L ++P ++ Y+ ++ + +M
Sbjct: 329 RLRAEVAVS-VHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGREMYI 387
Query: 199 VLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQA 258
+ +G+L VT+ + L G + GE I K G+ S N T I++
Sbjct: 388 IREGQLAVVADDGVTQYAV--------LGAGLYFGEISIINIK-GNMSGNR--RTANIKS 436
Query: 259 LTKVEAFVLMAYDLKQVL 276
L + F L DL++VL
Sbjct: 437 LGYSDLFCLSKEDLREVL 454
>sp|Q3UW12|CNGA4_MOUSE Cyclic nucleotide-gated cation channel alpha-4 OS=Mus musculus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 139 RLRLTFILSNKHKDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLF 198
RLR +S H + V+ F N + S LE+L ++P ++ Y+ ++ + +M
Sbjct: 329 RLRAEVAVS-VHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGREMYI 387
Query: 199 VLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQA 258
+ +G+L VT+ + L G + GE I K G+ S N T I++
Sbjct: 388 IREGQLAVVADDGVTQYAV--------LGAGLYFGEISIINIK-GNMSGNR--RTANIKS 436
Query: 259 LTKVEAFVLMAYDLKQVL 276
L + F L DL++VL
Sbjct: 437 LGYSDLFCLSKEDLREVL 454
>sp|Q90805|CNG1_CHICK Cyclic nucleotide-gated channel cone photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 735
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 11/132 (8%)
Query: 145 ILSNKHKDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKL 204
I N H D + V F + + L +L +KP VF+ YI ++ + +M + +GKL
Sbjct: 510 IAINVHLDTLKKVRIFQDCEAGLLIELVLKLKPTVFSPGDYICKKGDIGREMYIIKEGKL 569
Query: 205 WTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEA 264
+T+ L G + GE I K G S N T I+++ +
Sbjct: 570 AVVADDGITQFVV--------LSDGSYFGEISILNIK-GSKSGNR--RTANIRSIGYSDL 618
Query: 265 FVLMAYDLKQVL 276
F L DL + L
Sbjct: 619 FCLSKDDLMEAL 630
>sp|Q29441|CNGA3_BOVIN Cyclic nucleotide-gated cation channel alpha-3 OS=Bos taurus
GN=CNGA3 PE=2 SV=1
Length = 706
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 11/132 (8%)
Query: 145 ILSNKHKDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKL 204
I N H D + V F + + L +L ++PAVF+ YI ++ + +M + +GKL
Sbjct: 487 IAINVHLDTLRKVRIFQDCEAGLLVELVLKLRPAVFSPGDYICKKGDIGREMYIIKEGKL 546
Query: 205 WTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEA 264
+T+ L G + GE I K G S N T I+++ +
Sbjct: 547 AVVAEDGITQFVV--------LGDGSYFGEISILNIK-GSKSGNR--RTANIRSIGYSDL 595
Query: 265 FVLMAYDLKQVL 276
F L DL + L
Sbjct: 596 FCLSKDDLMEAL 607
>sp|P02710|ACHA_TORCA Acetylcholine receptor subunit alpha OS=Torpedo californica
GN=CHRNA1 PE=1 SV=1
Length = 461
Score = 32.0 bits (71), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 176 KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVT-ELSSNSGNLNNHLEGGDFSGE 234
PA+F II P DQ ++ +WTY +V+ S+ +L+ +E G++ +
Sbjct: 144 PPAIFKSYCEIIVTHFPFDQQNCTMKLGIWTYDGTKVSISPESDRPDLSTFMESGEWVMK 203
Query: 235 ELIAW 239
+ W
Sbjct: 204 DYRGW 208
>sp|P02711|ACHA_TORMA Acetylcholine receptor subunit alpha OS=Torpedo marmorata GN=CHRNA1
PE=1 SV=1
Length = 461
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 176 KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVT-ELSSNSGNLNNHLEGGDFSGE 234
PA+F II P DQ ++ +WTY +V+ S+ +L+ +E G++ +
Sbjct: 144 PPAIFKSYCEIIVTHFPFDQQNCTMKLGIWTYDGTKVSISPESDRPDLSTFMESGEWVMK 203
Query: 235 ELIAW 239
+ W
Sbjct: 204 DYRGW 208
>sp|Q9JJZ8|CNGA3_MOUSE Cyclic nucleotide-gated cation channel alpha-3 OS=Mus musculus
GN=Cnga3 PE=1 SV=2
Length = 631
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 11/132 (8%)
Query: 145 ILSNKHKDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKL 204
I N H D + V F + + L +L ++P VF+ YI ++ + +M + +GKL
Sbjct: 409 IAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGREMYIIKEGKL 468
Query: 205 WTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEA 264
VT+ L G + GE I K G S N T I+++ +
Sbjct: 469 AVVADDGVTQFVV--------LSDGSYFGEISILNIK-GSKSGNR--RTANIRSIGYSDL 517
Query: 265 FVLMAYDLKQVL 276
F L DL + L
Sbjct: 518 FCLSKDDLMEAL 529
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,454,790
Number of Sequences: 539616
Number of extensions: 3973382
Number of successful extensions: 11684
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 11608
Number of HSP's gapped (non-prelim): 56
length of query: 281
length of database: 191,569,459
effective HSP length: 116
effective length of query: 165
effective length of database: 128,974,003
effective search space: 21280710495
effective search space used: 21280710495
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 60 (27.7 bits)