Query 023527
Match_columns 281
No_of_seqs 324 out of 1225
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 08:20:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023527.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023527hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wgp_A Probable cyclic nucleot 99.8 4.6E-21 1.6E-25 153.3 10.2 125 151-280 5-130 (137)
2 3mdp_A Cyclic nucleotide-bindi 99.8 5E-20 1.7E-24 147.3 11.3 115 151-279 5-122 (142)
3 2z69_A DNR protein; beta barre 99.8 2.6E-19 9E-24 144.9 13.7 116 151-279 11-126 (154)
4 2pqq_A Putative transcriptiona 99.8 3.2E-19 1.1E-23 143.3 14.0 115 151-279 4-118 (149)
5 2ptm_A Hyperpolarization-activ 99.8 2.3E-19 8E-24 153.2 13.7 108 154-279 73-180 (198)
6 3idb_B CAMP-dependent protein 99.8 2.9E-19 1E-23 147.3 12.9 114 151-279 37-150 (161)
7 3bpz_A Potassium/sodium hyperp 99.8 2.1E-19 7.2E-24 154.1 11.7 116 145-279 53-180 (202)
8 3gyd_A CNMP-BD protein, cyclic 99.8 1.1E-18 3.8E-23 148.6 15.5 114 152-279 39-152 (187)
9 3dn7_A Cyclic nucleotide bindi 99.8 1.2E-18 4E-23 147.3 14.3 115 151-279 6-121 (194)
10 3ukn_A Novel protein similar t 99.8 6.2E-19 2.1E-23 152.1 12.7 116 146-279 58-185 (212)
11 4f8a_A Potassium voltage-gated 99.8 1.4E-18 4.8E-23 141.7 13.4 112 151-279 26-137 (160)
12 4ev0_A Transcription regulator 99.8 2.2E-18 7.5E-23 147.5 14.1 112 154-279 1-112 (216)
13 3iwz_A CAP-like, catabolite ac 99.8 3.3E-18 1.1E-22 147.7 14.5 116 151-279 10-125 (230)
14 1zyb_A Transcription regulator 99.8 2.5E-18 8.7E-23 150.2 13.9 116 151-279 17-134 (232)
15 3ocp_A PRKG1 protein; serine/t 99.8 4E-18 1.4E-22 137.0 13.8 110 151-279 22-131 (139)
16 3d0s_A Transcriptional regulat 99.8 2.9E-18 1E-22 148.3 11.8 115 151-279 5-119 (227)
17 3e97_A Transcriptional regulat 99.8 4E-18 1.4E-22 147.8 12.2 115 151-279 5-119 (231)
18 3dkw_A DNR protein; CRP-FNR, H 99.8 1.7E-18 5.8E-23 149.2 9.8 116 151-279 8-123 (227)
19 3dv8_A Transcriptional regulat 99.8 7E-18 2.4E-22 144.7 13.4 114 152-279 3-118 (220)
20 3fx3_A Cyclic nucleotide-bindi 99.8 5.9E-18 2E-22 147.3 12.7 115 151-279 10-124 (237)
21 1vp6_A CNBD, cyclic-nucleotide 99.8 5.2E-18 1.8E-22 135.3 10.9 107 152-279 11-117 (138)
22 3pna_A CAMP-dependent protein 99.7 1.1E-17 3.6E-22 137.2 12.4 110 151-279 37-146 (154)
23 4ava_A Lysine acetyltransferas 99.7 8.8E-18 3E-22 154.0 13.3 115 149-279 10-124 (333)
24 2d93_A RAP guanine nucleotide 99.7 5E-18 1.7E-22 135.8 8.2 109 152-279 16-126 (134)
25 2gau_A Transcriptional regulat 99.7 2.2E-17 7.5E-22 143.2 11.2 110 156-279 14-123 (232)
26 3ryp_A Catabolite gene activat 99.7 8.2E-17 2.8E-21 137.1 13.9 109 158-279 2-110 (210)
27 3of1_A CAMP-dependent protein 99.7 5.3E-17 1.8E-21 141.0 12.4 110 151-279 6-115 (246)
28 3of1_A CAMP-dependent protein 99.7 1.1E-16 3.7E-21 139.0 12.6 136 124-279 92-234 (246)
29 3shr_A CGMP-dependent protein 99.7 2.4E-16 8.3E-21 142.1 14.2 110 151-279 38-147 (299)
30 2fmy_A COOA, carbon monoxide o 99.7 4.4E-17 1.5E-21 140.5 8.9 106 152-279 4-109 (220)
31 3shr_A CGMP-dependent protein 99.7 1E-16 3.4E-21 144.6 11.5 141 124-279 124-271 (299)
32 2qcs_B CAMP-dependent protein 99.7 2.9E-16 9.9E-21 140.6 14.3 141 124-279 124-271 (291)
33 2oz6_A Virulence factor regula 99.7 3.9E-16 1.3E-20 132.6 14.2 104 163-279 1-107 (207)
34 3tnp_B CAMP-dependent protein 99.7 1.8E-16 6E-21 152.0 13.2 114 151-279 144-257 (416)
35 3kcc_A Catabolite gene activat 99.7 8.2E-16 2.8E-20 137.0 13.7 108 159-279 53-160 (260)
36 2qcs_B CAMP-dependent protein 99.7 5.7E-16 2E-20 138.6 12.3 110 151-279 38-147 (291)
37 1ft9_A Carbon monoxide oxidati 99.7 1.5E-16 5.3E-21 137.4 7.8 104 154-279 2-105 (222)
38 3beh_A MLL3241 protein; transm 99.7 8.6E-18 2.9E-22 157.1 -0.2 107 153-280 229-335 (355)
39 1o5l_A Transcriptional regulat 99.6 5.3E-16 1.8E-20 133.7 10.8 110 157-279 4-113 (213)
40 3tnp_B CAMP-dependent protein 99.6 9.8E-16 3.4E-20 146.8 13.8 140 124-279 234-386 (416)
41 3e6c_C CPRK, cyclic nucleotide 99.6 5.3E-16 1.8E-20 136.6 10.9 116 147-279 4-119 (250)
42 1o7f_A CAMP-dependent RAP1 gua 99.6 1.9E-15 6.4E-20 144.7 14.8 114 151-279 41-156 (469)
43 4din_B CAMP-dependent protein 99.6 6.3E-16 2.2E-20 146.2 10.3 142 123-279 214-362 (381)
44 4din_B CAMP-dependent protein 99.6 2.3E-15 7.9E-20 142.3 10.7 110 151-279 129-238 (381)
45 4f7z_A RAP guanine nucleotide 99.6 8.4E-15 2.9E-19 153.8 15.2 114 154-280 44-157 (999)
46 1o7f_A CAMP-dependent RAP1 gua 99.6 1.1E-14 3.8E-19 139.3 13.9 110 152-279 337-448 (469)
47 2bgc_A PRFA; bacterial infecti 99.5 3.1E-14 1.1E-18 124.6 12.3 105 161-279 2-110 (238)
48 3la7_A Global nitrogen regulat 99.5 6.7E-14 2.3E-18 123.0 12.6 102 165-279 30-135 (243)
49 3cf6_E RAP guanine nucleotide 99.5 1.1E-13 3.8E-18 141.1 12.9 110 152-279 32-143 (694)
50 4f7z_A RAP guanine nucleotide 99.5 1.9E-13 6.6E-18 143.4 13.3 109 153-279 338-448 (999)
51 3b02_A Transcriptional regulat 99.4 1.4E-12 4.9E-17 110.4 9.7 81 178-273 2-82 (195)
52 2zcw_A TTHA1359, transcription 99.3 2.5E-12 8.4E-17 109.4 6.9 87 171-273 1-89 (202)
53 3rns_A Cupin 2 conserved barre 91.3 1.4 4.7E-05 38.0 10.1 69 174-267 38-106 (227)
54 3fjs_A Uncharacterized protein 90.8 1.8 6.2E-05 33.0 9.4 68 175-267 38-105 (114)
55 2ozj_A Cupin 2, conserved barr 87.6 3 0.0001 31.1 8.4 46 177-233 42-87 (114)
56 1yhf_A Hypothetical protein SP 86.8 5.3 0.00018 29.6 9.3 68 175-267 42-109 (115)
57 3lwc_A Uncharacterized protein 84.2 2 7E-05 33.4 6.0 45 177-233 44-88 (119)
58 2pfw_A Cupin 2, conserved barr 84.2 5.9 0.0002 29.4 8.5 68 175-267 36-103 (116)
59 4e2g_A Cupin 2 conserved barre 81.6 7.5 0.00026 29.3 8.3 49 174-233 42-90 (126)
60 1o5u_A Novel thermotoga mariti 81.5 2.9 9.8E-05 31.7 5.7 46 176-233 34-79 (101)
61 2gu9_A Tetracenomycin polyketi 81.0 3.8 0.00013 30.0 6.1 48 175-233 23-73 (113)
62 1v70_A Probable antibiotics sy 80.2 4.5 0.00015 28.9 6.2 46 176-232 31-77 (105)
63 3h8u_A Uncharacterized conserv 78.8 3.3 0.00011 31.4 5.3 49 175-233 41-90 (125)
64 3rns_A Cupin 2 conserved barre 76.5 11 0.00038 32.1 8.6 68 175-267 155-223 (227)
65 1yfu_A 3-hydroxyanthranilate-3 75.2 3.9 0.00013 34.7 5.1 35 192-233 54-88 (174)
66 3ibm_A Cupin 2, conserved barr 74.5 6.2 0.00021 32.3 6.2 48 175-233 58-105 (167)
67 3bcw_A Uncharacterized protein 74.2 1.9 6.5E-05 34.0 2.8 45 178-233 54-98 (123)
68 2b8m_A Hypothetical protein MJ 74.2 6.5 0.00022 29.4 5.8 46 177-233 31-77 (117)
69 2q30_A Uncharacterized protein 73.6 20 0.00068 25.8 8.4 68 176-267 36-105 (110)
70 1dgw_A Canavalin; duplicated s 72.7 5.7 0.00019 32.9 5.6 52 175-233 43-94 (178)
71 3es4_A Uncharacterized protein 72.6 4.5 0.00016 31.9 4.6 45 178-233 47-91 (116)
72 1zvf_A 3-hydroxyanthranilate 3 71.8 4.4 0.00015 34.4 4.6 60 167-233 13-91 (176)
73 1sfn_A Conserved hypothetical 71.5 6.9 0.00023 34.0 6.1 50 173-233 165-215 (246)
74 3es1_A Cupin 2, conserved barr 71.3 4 0.00014 34.3 4.2 49 174-232 80-128 (172)
75 1fi2_A Oxalate oxidase, germin 71.1 12 0.00042 31.3 7.4 52 175-233 74-130 (201)
76 2i45_A Hypothetical protein; n 70.9 4.2 0.00014 30.0 3.9 69 180-272 35-103 (107)
77 1o4t_A Putative oxalate decarb 70.8 8.5 0.00029 29.8 5.9 46 176-232 60-106 (133)
78 2bnm_A Epoxidase; oxidoreducta 70.6 6.8 0.00023 32.2 5.6 50 177-233 121-173 (198)
79 2pyt_A Ethanolamine utilizatio 70.4 5.1 0.00017 31.8 4.5 44 177-233 61-104 (133)
80 2fqp_A Hypothetical protein BP 70.2 2.3 7.9E-05 31.2 2.3 49 176-233 21-70 (97)
81 3l2h_A Putative sugar phosphat 69.8 6.1 0.00021 31.5 5.0 46 176-232 49-96 (162)
82 3kgz_A Cupin 2 conserved barre 69.7 5.3 0.00018 32.5 4.6 45 177-232 48-92 (156)
83 3i7d_A Sugar phosphate isomera 68.5 6.9 0.00024 31.8 5.1 47 176-233 46-94 (163)
84 1vj2_A Novel manganese-contain 67.9 7.8 0.00027 29.6 5.1 47 176-233 51-97 (126)
85 1y9q_A Transcriptional regulat 67.5 11 0.00039 30.8 6.3 45 178-233 109-155 (192)
86 3d82_A Cupin 2, conserved barr 67.4 19 0.00064 25.6 6.9 52 193-269 50-101 (102)
87 2vqa_A SLL1358 protein, MNCA; 67.3 14 0.00047 33.5 7.3 53 175-233 54-107 (361)
88 3jzv_A Uncharacterized protein 67.1 5.6 0.00019 32.8 4.3 46 177-233 57-102 (166)
89 4i4a_A Similar to unknown prot 66.7 10 0.00035 28.6 5.5 78 176-278 37-118 (128)
90 1sq4_A GLXB, glyoxylate-induce 65.0 10 0.00035 33.7 5.9 50 173-233 191-241 (278)
91 4b29_A Dimethylsulfoniopropion 65.0 11 0.00036 33.0 5.8 46 178-233 137-182 (217)
92 2q1z_B Anti-sigma factor CHRR, 64.6 19 0.00066 30.2 7.3 46 173-233 125-170 (195)
93 2vqa_A SLL1358 protein, MNCA; 64.5 15 0.00051 33.2 7.1 53 175-233 236-289 (361)
94 3bu7_A Gentisate 1,2-dioxygena 64.1 5.6 0.00019 37.7 4.1 53 171-233 119-173 (394)
95 1j58_A YVRK protein; cupin, de 63.7 14 0.00048 33.8 6.7 52 175-232 81-132 (385)
96 2vpv_A Protein MIF2, MIF2P; nu 63.6 6.6 0.00023 32.8 4.1 32 191-233 108-139 (166)
97 1sef_A Conserved hypothetical 63.2 12 0.00042 32.8 6.1 48 175-233 184-232 (274)
98 1lr5_A Auxin binding protein 1 63.0 9.1 0.00031 30.6 4.7 51 176-233 44-99 (163)
99 2o1q_A Putative acetyl/propion 62.9 18 0.00062 28.8 6.5 52 174-234 45-96 (145)
100 3h7j_A Bacilysin biosynthesis 62.6 13 0.00043 32.1 5.9 47 174-231 35-81 (243)
101 3cew_A Uncharacterized cupin p 62.1 12 0.00043 28.1 5.2 47 176-233 29-77 (125)
102 1fxz_A Glycinin G1; proglycini 61.9 17 0.00056 35.3 7.1 50 178-232 343-393 (476)
103 3fz3_A Prunin; TREE NUT allerg 61.2 20 0.00069 35.3 7.6 61 167-232 388-449 (531)
104 1sfn_A Conserved hypothetical 60.5 14 0.00049 31.9 5.9 45 176-233 53-97 (246)
105 3c3v_A Arachin ARAH3 isoform; 60.5 20 0.00069 35.0 7.5 57 171-232 370-427 (510)
106 1y3t_A Hypothetical protein YX 60.2 17 0.00056 32.3 6.4 47 176-233 49-96 (337)
107 2d5f_A Glycinin A3B4 subunit; 60.2 21 0.00073 34.6 7.6 61 168-233 362-423 (493)
108 2f4p_A Hypothetical protein TM 59.6 20 0.00069 28.3 6.2 48 176-233 51-98 (147)
109 2e9q_A 11S globulin subunit be 59.4 19 0.00065 34.7 7.0 50 160-210 51-100 (459)
110 1j58_A YVRK protein; cupin, de 59.2 21 0.00071 32.7 7.0 51 177-233 261-312 (385)
111 2opk_A Hypothetical protein; p 59.0 14 0.00048 27.8 5.0 44 181-233 38-84 (112)
112 3ht1_A REMF protein; cupin fol 59.0 7.7 0.00026 29.8 3.5 47 178-233 44-90 (145)
113 3cjx_A Protein of unknown func 58.8 19 0.00066 29.7 6.1 49 174-234 44-92 (165)
114 4axo_A EUTQ, ethanolamine util 58.4 8.6 0.00029 31.5 3.8 32 191-233 82-113 (151)
115 3d0j_A Uncharacterized protein 58.2 10 0.00035 31.0 4.2 44 187-233 44-87 (140)
116 1uij_A Beta subunit of beta co 57.4 13 0.00044 35.3 5.4 53 174-233 50-102 (416)
117 3myx_A Uncharacterized protein 57.3 8.8 0.0003 33.9 3.9 40 182-233 55-94 (238)
118 2d40_A Z3393, putative gentisa 56.3 9.2 0.00032 35.3 4.1 48 176-233 103-150 (354)
119 2qnk_A 3-hydroxyanthranilate 3 56.2 13 0.00044 33.8 4.9 63 185-269 44-106 (286)
120 4e2q_A Ureidoglycine aminohydr 56.1 21 0.00071 32.0 6.2 69 176-268 73-141 (266)
121 1sq4_A GLXB, glyoxylate-induce 55.8 10 0.00036 33.6 4.2 46 177-233 72-119 (278)
122 2ea7_A 7S globulin-1; beta bar 55.6 16 0.00054 34.9 5.7 60 167-233 54-114 (434)
123 3ebr_A Uncharacterized RMLC-li 55.3 13 0.00045 30.4 4.5 67 173-266 42-112 (159)
124 1rc6_A Hypothetical protein YL 54.7 11 0.00038 32.7 4.2 46 177-233 63-110 (261)
125 1fxz_A Glycinin G1; proglycini 54.5 25 0.00086 34.0 7.0 51 159-210 35-85 (476)
126 1rc6_A Hypothetical protein YL 54.4 14 0.00049 32.0 4.8 48 175-233 181-229 (261)
127 2e9q_A 11S globulin subunit be 54.3 31 0.0011 33.2 7.6 60 168-232 317-377 (459)
128 2cav_A Protein (canavalin); vi 52.6 18 0.00061 34.7 5.5 53 174-233 87-139 (445)
129 3h7j_A Bacilysin biosynthesis 52.1 16 0.00056 31.3 4.8 47 177-234 149-196 (243)
130 3nw4_A Gentisate 1,2-dioxygena 50.7 14 0.00047 34.8 4.3 48 176-233 106-153 (368)
131 1juh_A Quercetin 2,3-dioxygena 50.5 19 0.00066 32.9 5.3 70 182-276 261-334 (350)
132 3bu7_A Gentisate 1,2-dioxygena 50.4 15 0.00052 34.7 4.6 79 176-279 297-378 (394)
133 4e2q_A Ureidoglycine aminohydr 50.2 27 0.00093 31.2 6.0 53 170-233 183-236 (266)
134 2o8q_A Hypothetical protein; c 49.7 16 0.00055 27.8 3.9 31 193-233 64-94 (134)
135 2d40_A Z3393, putative gentisa 49.5 45 0.0016 30.5 7.6 77 178-279 273-349 (354)
136 3ksc_A LEGA class, prolegumin; 48.6 42 0.0014 32.7 7.5 60 168-232 353-413 (496)
137 3myx_A Uncharacterized protein 46.8 18 0.00061 31.9 4.2 45 178-233 172-216 (238)
138 2xp1_A SPT6; transcription, IW 46.0 24 0.00083 29.6 4.7 41 155-201 12-52 (178)
139 3qac_A 11S globulin SEED stora 44.8 55 0.0019 31.6 7.6 60 168-232 318-378 (465)
140 2phl_A Phaseolin; plant SEED s 43.8 24 0.00082 33.3 4.8 51 174-231 53-103 (397)
141 1sef_A Conserved hypothetical 43.3 18 0.00062 31.7 3.7 46 177-233 66-113 (274)
142 2oa2_A BH2720 protein; 1017534 43.1 46 0.0016 25.9 5.8 50 177-232 47-98 (148)
143 3kgl_A Cruciferin; 11S SEED gl 41.7 33 0.0011 33.2 5.5 50 178-232 328-378 (466)
144 3s7i_A Allergen ARA H 1, clone 40.9 37 0.0013 32.2 5.7 51 175-232 46-96 (418)
145 3lag_A Uncharacterized protein 39.8 9.1 0.00031 28.4 1.0 52 174-233 18-70 (98)
146 3nw4_A Gentisate 1,2-dioxygena 38.3 86 0.0029 29.3 7.6 78 178-280 284-361 (368)
147 2vec_A YHAK, pirin-like protei 38.2 92 0.0031 27.4 7.5 67 178-268 187-253 (256)
148 3o14_A Anti-ecfsigma factor, C 35.6 62 0.0021 27.8 5.9 64 175-267 45-108 (223)
149 1juh_A Quercetin 2,3-dioxygena 35.0 63 0.0022 29.4 6.1 37 190-232 68-104 (350)
150 2phl_A Phaseolin; plant SEED s 35.0 53 0.0018 30.9 5.7 40 193-233 260-301 (397)
151 1y3t_A Hypothetical protein YX 34.2 45 0.0015 29.4 4.8 30 193-233 239-268 (337)
152 2d5f_A Glycinin A3B4 subunit; 34.0 1E+02 0.0035 29.8 7.6 45 166-210 38-82 (493)
153 3qac_A 11S globulin SEED stora 32.4 1.1E+02 0.0036 29.6 7.4 45 166-210 43-87 (465)
154 3ksc_A LEGA class, prolegumin; 31.1 97 0.0033 30.1 6.9 45 166-210 39-83 (496)
155 1uij_A Beta subunit of beta co 29.2 1.1E+02 0.0037 28.8 6.8 64 166-233 242-318 (416)
156 2qnk_A 3-hydroxyanthranilate 3 28.5 2E+02 0.007 25.9 8.1 69 176-270 210-278 (286)
157 1x82_A Glucose-6-phosphate iso 27.4 82 0.0028 25.9 5.1 50 177-232 71-129 (190)
158 3c3v_A Arachin ARAH3 isoform; 25.6 1.6E+02 0.0056 28.6 7.5 51 159-210 35-85 (510)
159 2arc_A ARAC, arabinose operon 23.6 75 0.0026 24.2 3.9 32 190-232 35-66 (164)
160 3o14_A Anti-ecfsigma factor, C 23.6 2.5E+02 0.0085 23.9 7.6 44 173-232 146-189 (223)
161 1vr3_A Acireductone dioxygenas 23.6 1.2E+02 0.0041 25.6 5.4 34 193-232 104-137 (191)
162 4h7l_A Uncharacterized protein 23.5 43 0.0015 27.6 2.5 35 188-233 61-97 (157)
163 2ea7_A 7S globulin-1; beta bar 21.0 1.3E+02 0.0046 28.4 5.7 64 166-233 259-334 (434)
164 2xlg_A SLL1785 protein, CUCA; 20.4 40 0.0014 29.4 1.8 31 178-208 48-79 (239)
165 3or8_A Transcription elongatio 20.2 1.3E+02 0.0044 25.6 4.9 39 156-199 7-46 (197)
No 1
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=99.84 E-value=4.6e-21 Score=153.32 Aligned_cols=125 Identities=42% Similarity=0.736 Sum_probs=103.7
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceee-eeecCC
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLN-NHLEGG 229 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~-~~L~~G 229 (281)
.++|+++|+|+.|++++++.|+..++.+.|++|++|+++||+.+++|||++|.|++.... +|++..+. ..++||
T Consensus 5 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~-----~g~~~~~~~~~l~~G 79 (137)
T 1wgp_A 5 SSGVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTD-----GGRSGFYNRSLLKEG 79 (137)
T ss_dssp SCSCSSCSGGGSCCHHHHHHHHHHCBCCCBCTTEEEECTTSBCSEEEEEEECCCEEECCS-----SCSSSSSCEEECCTT
T ss_pred HHHHHcCcchhhCCHHHHHHHHHHheEEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEEcC-----CCcceeeeeeeecCC
Confidence 467899999999999999999999999999999999999999999999999999965334 67765551 289999
Q ss_pred ceechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhhc
Q 023527 230 DFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNID 280 (281)
Q Consensus 230 DffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f~ 280 (281)
|+|||..+.+++...+....|++++|++|+++|+++.|++++|+++++++.
T Consensus 80 ~~fGe~~l~~~~~~~~~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p 130 (137)
T 1wgp_A 80 DFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFR 130 (137)
T ss_dssp CBSSTHHHHHHHCSSCCSSSCBCSSEEEESSCBEEEEEEHHHHHHHHHHHC
T ss_pred CEecHHHHHHHhccccccccccceeEEEEeEEEEEEEECHHHHHHHHHHCH
Confidence 999998643344432111122467899999999999999999999998873
No 2
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=99.82 E-value=5e-20 Score=147.26 Aligned_cols=115 Identities=17% Similarity=0.212 Sum_probs=97.0
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcce---eeeeec
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGN---LNNHLE 227 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~---~~~~L~ 227 (281)
.++|+++|+|+++++++++.+++.++.+.|++|++|+++||+.+++|||++|.|+++..+ .+|++.. + ..++
T Consensus 5 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~----~~g~~~~~~~~-~~~~ 79 (142)
T 3mdp_A 5 PERLRVYRFFASLTDEQLKDIALISEEKSFPTGSVIFKENSKADNLMLLLEGGVELFYSN----GGAGSAANSTV-CSVV 79 (142)
T ss_dssp TTGGGGSHHHHTSCHHHHHHHHHTEEEEEECTTCEEECTTSBCCEEEEEEESCEEEECC-------------CEE-EEEC
T ss_pred HHHHhhCchhccCCHHHHHHHHHhhcEEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEEC----CCCCceEeeeE-EEec
Confidence 567899999999999999999999999999999999999999999999999999998766 3666655 5 7899
Q ss_pred CCceechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 228 GGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 228 ~GDffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
|||+|||..+ +. + .++.+|++|+++|+++.|++++|.++++++
T Consensus 80 ~G~~fG~~~~---~~-----~-~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~ 122 (142)
T 3mdp_A 80 PGAIFGVSSL---IK-----P-YHYTSSARATKPVRVVDINGARLREMSENN 122 (142)
T ss_dssp TTCEECGGGS---ST-----T-CBCSSEEEESSCEEEEEEEHHHHHHHHHHC
T ss_pred CCCEechHHH---cC-----C-CCceEEEEECCcEEEEEEeHHHHHHHHHHC
Confidence 9999999754 21 2 347789999999999999999999998765
No 3
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=99.81 E-value=2.6e-19 Score=144.92 Aligned_cols=116 Identities=14% Similarity=0.178 Sum_probs=98.5
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.++++++|+|+.+++++++.+++.++.+.|++|++|+++||+.+++|||++|.|+++..+ .+|++..+ ..++|||
T Consensus 11 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~----~~g~~~~~-~~~~~G~ 85 (154)
T 2z69_A 11 QQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLT----PEGQEKIL-EVTNERN 85 (154)
T ss_dssp HHHHTTSTTTTTSCHHHHHHHHHTCEEEEECTTCEEECTTSBCCEEEEEEESCEEEECCC----C-----CC-EEECTTE
T ss_pred HHHhhcChhhcCCCHHHHHHHHhhCcEEEecCCCEEecCCCccceEEEEEeCEEEEEEEC----CCCCEEEE-EEccCCC
Confidence 456899999999999999999999999999999999999999999999999999998765 25666555 7899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||..+ +. +.+++..+++|+++|+++.|++++|+++++++
T Consensus 86 ~~G~~~~---~~-----~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~ 126 (154)
T 2z69_A 86 TFAEAMM---FM-----DTPNYVATAQAVVPSQLFRFSNKAYLRQLQDN 126 (154)
T ss_dssp EESGGGG---GS-----SCSBCSSEEEESSSEEEEEEEHHHHHHHHTTC
T ss_pred eeccHhh---cc-----CCCCCceEEEEccceEEEEECHHHHHHHHHHC
Confidence 9999865 22 22337789999999999999999999998765
No 4
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=99.81 E-value=3.2e-19 Score=143.32 Aligned_cols=115 Identities=21% Similarity=0.182 Sum_probs=102.0
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.++++++|+|+.+++++++.+++.++.+.|++|++|+++||+++++|||++|.++++..+ .+|++..+ ..++|||
T Consensus 4 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~----~~g~~~~~-~~~~~g~ 78 (149)
T 2pqq_A 4 DDVLRRNPLFAALDDEQSAELRASMSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTS----PDGRENML-AVVGPSE 78 (149)
T ss_dssp GGGGTSSTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSEECEEEEEEESCEEEEEEC----TTSSEEEE-EEECTTC
T ss_pred HHHhhhChhhhcCCHHHHHHHHHhceEEEeCCCCEEECCCCCCCeEEEEEecEEEEEEEC----CCCcEEEE-EEcCCcC
Confidence 567899999999999999999999999999999999999999999999999999999876 36776555 7899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||..+ +. + .++..+++|+++|+++.|++++|++++.++
T Consensus 79 ~~G~~~~---~~-----~-~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~ 118 (149)
T 2pqq_A 79 LIGELSL---FD-----P-GPRTATGTALTEVKLLALGHGDLQPWLNVR 118 (149)
T ss_dssp EESGGGG---TS-----C-EECSSEEEESSCEEEEEEEGGGHHHHHHHC
T ss_pred EechHHh---cC-----C-CCcceEEEEccceEEEEEeHHHHHHHHHhC
Confidence 9999754 21 2 246789999999999999999999998875
No 5
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=99.81 E-value=2.3e-19 Score=153.15 Aligned_cols=108 Identities=22% Similarity=0.283 Sum_probs=96.5
Q ss_pred hhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 154 ILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 154 Lr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
|+++|+|++++++.++.|+..++...|+||++|+++||++++||||++|.|+++. . +|+ .+ ..+++||+||
T Consensus 73 l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~-~-----~g~--~~-~~l~~G~~fG 143 (198)
T 2ptm_A 73 VASVPFFVGADSNFVTRVVTLLEFEVFQPADYVIQEGTFGDRMFFIQQGIVDIIM-S-----DGV--IA-TSLSDGSYFG 143 (198)
T ss_dssp HHHCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCSEEEEEEECCEEEEC-T-----TSC--EE-EEECTTCEES
T ss_pred HhcCcchhcCCHHHHHHHHHhccceeeCCCCEEEECCCcCcEEEEEEeCEEEEEe-c-----CCe--EE-EEecCCCEec
Confidence 8999999999999999999999999999999999999999999999999999987 3 445 23 7899999999
Q ss_pred hhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 234 EELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 234 E~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
|..+ +. + .++++||+|+++|+++.|++++|.++++++
T Consensus 144 e~~~---~~-----~-~~~~~~~~a~~~~~l~~i~~~~f~~ll~~~ 180 (198)
T 2ptm_A 144 EICL---LT-----R-ERRVASVKCETYCTLFSLSVQHFNQVLDEF 180 (198)
T ss_dssp CHHH---HH-----S-SCCSSEEEESSCEEEEEEEHHHHHHHHHHC
T ss_pred hHHH---cC-----C-CccceEEEEeeEEEEEEEeHHHHHHHHHHC
Confidence 9855 22 1 246789999999999999999999999876
No 6
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=99.80 E-value=2.9e-19 Score=147.29 Aligned_cols=114 Identities=15% Similarity=0.184 Sum_probs=101.8
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.++|+++|+|++|++++++.|+..++.+.|++|++|+++||+++++|||++|.|+++... +|++..+ ..++|||
T Consensus 37 ~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~-----~g~~~~~-~~~~~G~ 110 (161)
T 3idb_B 37 QEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKC-----DGVGRCV-GNYDNRG 110 (161)
T ss_dssp HHHHTTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEEEE-----TTEEEEE-EEEESCC
T ss_pred HHHHhCCHhhhcCCHHHHHHHHHhcceeEeCCCCEEEeCCCCCcEEEEEEeCEEEEEEcC-----CCCeEEE-EEcCCCC
Confidence 456899999999999999999999999999999999999999999999999999999854 7776655 8899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||..+ +. + .++.+|++|+++|+++.|++++|.++++++
T Consensus 111 ~fGe~~~---~~-----~-~~~~~~v~A~~~~~~~~i~~~~~~~l~~~~ 150 (161)
T 3idb_B 111 SFGELAL---MY-----N-TPRAATITATSPGALWGLDRVTFRRIIVKN 150 (161)
T ss_dssp EECGGGG---TC-----C-CCCSSEEEESSSEEEEEEEHHHHHHHHHHH
T ss_pred EechHHH---Hc-----C-CCcccEEEECCCeEEEEEeHHHHHHHHHHC
Confidence 9999865 22 2 247789999999999999999999999876
No 7
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=99.80 E-value=2.1e-19 Score=154.14 Aligned_cols=116 Identities=22% Similarity=0.297 Sum_probs=100.8
Q ss_pred HHhhcchhh------------hhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccc
Q 023527 145 ILSNKHKDP------------ILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRV 212 (281)
Q Consensus 145 ll~~lp~dl------------Lr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~ 212 (281)
++.+||++| |+++|+|++++++.++.|+..++...|+||++|+++||++++||||++|.|+++. .
T Consensus 53 il~~l~~~L~~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~~-~-- 129 (202)
T 3bpz_A 53 ILGELNGPLREKIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLT-K-- 129 (202)
T ss_dssp HHHHSCHHHHHHHHHHHTHHHHHTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECEEEEEC-T--
T ss_pred HHHHcCHHHHHHHHHHHHHHHHhcCCchhcCCHHHHHHHHHhCCceEECCCCEEEECCCcCCeEEEEeccEEEEEE-C--
Confidence 456666654 8999999999999999999999999999999999999999999999999999875 3
Q ss_pred cccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 213 TELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 213 ~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|++ .++++||+|||..+ +. + .++++||+|+++|+++.|++++|.++++++
T Consensus 130 ---~g~~----~~l~~G~~fGe~~~---~~-----~-~~~~~~v~a~~~~~l~~i~~~~f~~ll~~~ 180 (202)
T 3bpz_A 130 ---GNKE----MKLSDGSYFGEICL---LT-----R-GRRTASVRADTYCRLYSLSVDNFNEVLEEY 180 (202)
T ss_dssp ---TSCC----EEEETTCEECHHHH---HH-----C-SBCSSEEEESSCEEEEEEEHHHHHHHHHHS
T ss_pred ---CCeE----EEEcCCCEeccHHH---hc-----C-CCcccEEEEeeEEEEEEEEHHHHHHHHHHC
Confidence 4554 56999999999755 22 1 246789999999999999999999999876
No 8
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=99.80 E-value=1.1e-18 Score=148.56 Aligned_cols=114 Identities=18% Similarity=0.273 Sum_probs=101.2
Q ss_pred hhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCce
Q 023527 152 DPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDF 231 (281)
Q Consensus 152 dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDf 231 (281)
++|+++|+|+.+++++++.++..++.+.|++|++|+++||+++.+|||++|.|+++..+ .+|++..+ ..++|||+
T Consensus 39 ~~L~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~----~~g~~~~~-~~~~~G~~ 113 (187)
T 3gyd_A 39 EIVNKIKLFGDFSNEEVRYLCSYMQCYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDI----PNKGIQTI-AKVGAGAI 113 (187)
T ss_dssp HHHTTCCSSCCCCHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEE----TTTEEEEE-EEEETTCE
T ss_pred HHHhcCHhhhcCCHHHHHHHHHhcEEEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEEC----CCCCeEEE-EEccCCCe
Confidence 35899999999999999999999999999999999999999999999999999999876 36776555 88999999
Q ss_pred echhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 232 SGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 232 fGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
|||..+ +.. .++.+|++|+++|+++.|++++|.++++++
T Consensus 114 fGe~~~---l~~------~~~~~~v~A~~~~~v~~i~~~~~~~l~~~~ 152 (187)
T 3gyd_A 114 IGEMSM---IDG------MPRSASCVASLPTDFAVLSRDALYQLLANM 152 (187)
T ss_dssp ESHHHH---HHC------CCCSSEEEEEEEEEEEEEEHHHHHHHHHHC
T ss_pred eeeHHH---hCC------CCeeEEEEECCCeEEEEEcHHHHHHHHHHC
Confidence 999864 221 246789999999999999999999998765
No 9
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=99.79 E-value=1.2e-18 Score=147.31 Aligned_cols=115 Identities=10% Similarity=0.079 Sum_probs=102.0
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
+++++++|+|.+|++++++.+.+.++.+.|+||++|+++||+++++|||++|.|+++..+ .+|++..+ ..++|||
T Consensus 6 ~~l~~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~----~~G~e~~~-~~~~~g~ 80 (194)
T 3dn7_A 6 TALINHIRKFIFLTDEDAGTLSAFFQLKKVRKKETLLKTGEICRINYFVVKGCLRLFFID----EKGIEQTT-QFAIENW 80 (194)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEEC----TTSCEEEE-EEEETTC
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHhCEEEEEcCCCEEECCCCeeeEEEEeecCeEEEEEEC----CCCCEEEE-EEccCCc
Confidence 567899999999999999999999999999999999999999999999999999999876 37787666 8899999
Q ss_pred eechh-hHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEE-LIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~-lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||. .+ +. + .++.++++|+++|+++.|++++|.++++++
T Consensus 81 ~~ge~~~~---~~-----~-~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~ 121 (194)
T 3dn7_A 81 WLSDYMAF---QK-----Q-QPADFYIQSVENCELLSITYTEQENLFERI 121 (194)
T ss_dssp EECCHHHH---HH-----T-CBCSSEEEESSCEEEEEEEHHHHHHHHHHC
T ss_pred EEeehHHH---hc-----C-CCCceEEEEECCEEEEEEeHHHHHHHHHhC
Confidence 99986 32 22 1 347789999999999999999999998875
No 10
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=99.79 E-value=6.2e-19 Score=152.06 Aligned_cols=116 Identities=18% Similarity=0.296 Sum_probs=100.0
Q ss_pred Hhhcchhh-----------hhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccc
Q 023527 146 LSNKHKDP-----------ILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTE 214 (281)
Q Consensus 146 l~~lp~dl-----------Lr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~ 214 (281)
+..||++| +.++|+|++++++.++.|+..++...|+||++|+++||++++||||++|.|+++. +
T Consensus 58 l~~Lp~~L~~~i~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-~---- 132 (212)
T 3ukn_A 58 LKDFPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLK-D---- 132 (212)
T ss_dssp TTTSCHHHHHHHHTTCCCGGGGSGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEES-S----
T ss_pred HHHcCHHHHHHHHHHHHHHHHhcHHhhcCCHHHHHHHHHHhheEEeCCCCEEEECCCcccEEEEEEecEEEEEE-C----
Confidence 56677665 5689999999999999999999999999999999999999999999999999875 3
Q ss_pred cCCCcceeeeeecCCceechhhHHHhhcCCCCCCCC-CcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 215 LSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLP-ISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 215 ~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p-~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
| . .+ ..+++||+|||..+ + .+.+ ++++||+|+++|+++.|++++|.++++++
T Consensus 133 -~-~--~~-~~l~~G~~fGe~~~---~-----~~~~~~~~~~v~a~~~~~l~~i~~~~f~~ll~~~ 185 (212)
T 3ukn_A 133 -N-T--VL-AILGKGDLIGSDSL---T-----KEQVIKTNANVKALTYCDLQYISLKGLREVLRLY 185 (212)
T ss_dssp -S-C--EE-EEECTTCEEECSCC---S-----SSSCCBBCSEEEESSCEEEEEEEHHHHHHHHHHC
T ss_pred -C-e--EE-EEecCCCCcCcHHh---c-----cCCCCCcceEEEEcccEEEEEEeHHHHHHHHHHC
Confidence 2 2 23 78999999999854 1 1221 57899999999999999999999999876
No 11
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=99.79 E-value=1.4e-18 Score=141.72 Aligned_cols=112 Identities=21% Similarity=0.239 Sum_probs=96.8
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.++|+++|+|+++++++++.+++.++.+.|++|++|+++||+++++|||++|.|+++..+ . .+ ..++|||
T Consensus 26 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~-------~--~~-~~~~~G~ 95 (160)
T 4f8a_A 26 RKVFKEHPAFRLASDGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQDD-------E--VV-AILGKGD 95 (160)
T ss_dssp HHHHTTCGGGTTCCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEETT-------E--EE-EEEETTC
T ss_pred HHHHHhCHhhhhCCHHHHHHHHHhceeeeeCCCCEEEeCCCCccEEEEEEeeEEEEEECC-------E--EE-EEecCCC
Confidence 345899999999999999999999999999999999999999999999999999997633 2 22 7899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||..+ +. ....++.++++|+++|+++.|++++|.++++++
T Consensus 96 ~fG~~~~---~~----~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~ 137 (160)
T 4f8a_A 96 VFGDVFW---KE----ATLAQSCANVRALTYCDLHVIKRDALQKVLEFY 137 (160)
T ss_dssp EEECCTT---TC----SSCCBCSSEEEESSCEEEEEEEHHHHHHHHHHC
T ss_pred EeCcHHH---hc----CcccceEEEEEECCceEEEEEcHHHHHHHHHHH
Confidence 9999854 21 111357789999999999999999999999875
No 12
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=99.78 E-value=2.2e-18 Score=147.46 Aligned_cols=112 Identities=14% Similarity=0.201 Sum_probs=97.5
Q ss_pred hhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 154 ILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 154 Lr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
|+++|+|+++++++++.+++.++.+.|+||++|+++||+.+++|||++|.|+++..+ .+|++..+ ..++|||+||
T Consensus 1 L~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~----~~g~~~~~-~~~~~g~~~G 75 (216)
T 4ev0_A 1 MKGSPLFHGLAPEEVDLALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTH----LGGQERTL-ALLGPGELFG 75 (216)
T ss_dssp ---CGGGTTCCHHHHHHHHTTCEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEEC----SSSCEEEE-EEECTTCEEC
T ss_pred CCCChhhcCCCHHHHHHHHHhheEEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEEC----CCCCEEEE-EEecCCCEEe
Confidence 578999999999999999999999999999999999999999999999999999876 36776555 8899999999
Q ss_pred hhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 234 EELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 234 E~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
|..+ +. + .++.++++|+++|+++.+++++|.++++++
T Consensus 76 ~~~~---~~-----~-~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~ 112 (216)
T 4ev0_A 76 EMSL---LD-----E-GERSASAVAVEDTELLALFREDYLALIRRL 112 (216)
T ss_dssp HHHH---HH-----C-CBCSSEEEESSSEEEEEEEHHHHHHHHHHC
T ss_pred ehhh---cC-----C-CCcceEEEEcCCEEEEEEcHHHHHHHHHHC
Confidence 9754 22 1 246789999999999999999999998765
No 13
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=99.77 E-value=3.3e-18 Score=147.68 Aligned_cols=116 Identities=14% Similarity=0.187 Sum_probs=92.4
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
...+++.|+|++|++++++.+.+.++.+.|+||++|+++||+.+++|||++|.|+++..+ .+|++..+ ..++|||
T Consensus 10 ~~~lr~~~lf~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~----~~G~~~~~-~~~~~g~ 84 (230)
T 3iwz_A 10 TTTVRNATPSLTLDAGTIERFLAHSHRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEE----DDDRELVL-GYFGSGE 84 (230)
T ss_dssp ------------CCHHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEEC----TTSCEEEE-EEECTTC
T ss_pred hhhhhhcchhccCCHHHHHHHHHhCeEEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEEC----CCCCEEEE-EEecCCC
Confidence 456899999999999999999999999999999999999999999999999999999876 37777665 8899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||..+ +. +.+++.++++|+++|+++.|++++|.++++++
T Consensus 85 ~~G~~~~---~~-----~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~ 125 (230)
T 3iwz_A 85 FVGEMGL---FI-----ESDTREVILRTRTQCELAEISYERLQQLFQTS 125 (230)
T ss_dssp EESCGGG---TS-----CCSBCCSEEEESSCEEEEEEEHHHHHHHHHTT
T ss_pred EEEehhh---hc-----CCCCceeEEEEcCcEEEEEEeHHHHHHHHHHh
Confidence 9999865 21 22347789999999999999999999998765
No 14
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=99.77 E-value=2.5e-18 Score=150.15 Aligned_cols=116 Identities=16% Similarity=0.145 Sum_probs=101.6
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhc--ceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecC
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDV--VKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEG 228 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~--l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~ 228 (281)
.+.++++|+|+.|++++++.+++. ++.+.|+||++|+++||+++++|||++|.|+++..+ .+|++..+ ..++|
T Consensus 17 ~~~l~~~~lf~~l~~~~~~~l~~~~~~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~----~~G~~~~l-~~~~~ 91 (232)
T 1zyb_A 17 FDTLLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNA----KENIYTVI-EQIEA 91 (232)
T ss_dssp HTTGGGSGGGTTCCHHHHHHHHHTSCCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEEC----GGGSCEEE-EEEES
T ss_pred HHHHhcCccccCCCHHHHHHHHhhCCcEEEEECCCCEEECCCCcccEEEEEEeeEEEEEEEC----CCCCEEEE-EEccC
Confidence 445899999999999999999998 999999999999999999999999999999998766 36777665 78999
Q ss_pred CceechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 229 GDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 229 GDffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
||+|||..+ + .+.|++.++++|+++|+++.|++++|.+++.++
T Consensus 92 G~~fG~~~~---~-----~~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~ 134 (232)
T 1zyb_A 92 PYLIEPQSL---F-----GMNTNYASSYVAHTEVHTVCISKAFVLSDLFRY 134 (232)
T ss_dssp SEEECGGGG---S-----SSCCBCSSEEEESSCEEEEEEEHHHHHHTGGGS
T ss_pred CCeeeehHH---h-----CCCCCCceEEEEccceEEEEEEHHHHHHHhccC
Confidence 999999865 2 222337789999999999999999999987654
No 15
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=99.77 E-value=4e-18 Score=136.97 Aligned_cols=110 Identities=22% Similarity=0.288 Sum_probs=96.1
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.++|+++|+|+.+++++++.|+..++.+.|++|++|+++||+++++|||++|.|++.. +|+ .+ ..+++||
T Consensus 22 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~-------~g~--~~-~~~~~G~ 91 (139)
T 3ocp_A 22 KEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK-------EGV--KL-CTMGPGK 91 (139)
T ss_dssp HHHHHHCTTTTTSCHHHHHHHHHHCEEEEECSSCEEECTTSCCCEEEEEEECCEEEEE-------TTE--EE-EEECTTC
T ss_pred HHHHhcCHhhhcCCHHHHHHHHHhcEEEecCCCCEEEeCCCcCCEEEEEEeCEEEEEE-------CCE--EE-EEeCCCC
Confidence 4568999999999999999999999999999999999999999999999999999854 333 23 7899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||..+ +. + .++.+|++|+++|+++.|++++|.++++++
T Consensus 92 ~fGe~~~---l~-----~-~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~ 131 (139)
T 3ocp_A 92 VFGELAI---LY-----N-CTRTATVKTLVNVKLWAIDRQCFQTIMMRT 131 (139)
T ss_dssp EESCHHH---HH-----C-CCCSSEEEESSCEEEEEEEHHHHHHHHTC-
T ss_pred EeccHHH---HC-----C-CCcceEEEECcceEEEEEcHHHHHHHHhhC
Confidence 9999865 22 1 246789999999999999999999999876
No 16
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=99.76 E-value=2.9e-18 Score=148.31 Aligned_cols=115 Identities=17% Similarity=0.225 Sum_probs=101.4
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.++|+++|+|+.+++++++.+++.++.+.|+||++|+++||+++++|||++|.|+++..+ .+|++..+ ..++|||
T Consensus 5 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~----~~g~~~~~-~~~~~G~ 79 (227)
T 3d0s_A 5 DEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRA----PDGRENLL-TIMGPSD 79 (227)
T ss_dssp HHHHTTSSTTSSCCSSTTHHHHTTSCEEEECTTCEEECTTCCCCEEEEEEESCEEEEEEC----TTSCEEEE-EEECTTC
T ss_pred HHHHhcChhhcCCCHHHHHHHHhhCeEEEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEEC----CCCcEEEE-EEecCCC
Confidence 457899999999999999999999999999999999999999999999999999999876 36776655 8899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||..+ +. + .++.+|++|+++|+++.|++++|.++++++
T Consensus 80 ~~G~~~~---~~-----~-~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~ 119 (227)
T 3d0s_A 80 MFGELSI---FD-----P-GPRTSSATTITEVRAVSMDRDALRSWIADR 119 (227)
T ss_dssp EESCHHH---HS-----C-SCCSSEEEESSCEEEEEEEHHHHHHTTSSC
T ss_pred EEeeHHH---cC-----C-CCceeEEEEcccEEEEEEeHHHHHHHHHHC
Confidence 9999854 22 1 247789999999999999999999887654
No 17
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=99.76 E-value=4e-18 Score=147.84 Aligned_cols=115 Identities=17% Similarity=0.233 Sum_probs=100.9
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.++|+++|+|++|++++++.+++.++.+.|+||++|+++||+.+++|||++|.|+++..+ .+|++..+ ..++|||
T Consensus 5 ~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~----~~g~~~~~-~~~~~g~ 79 (231)
T 3e97_A 5 LDDLKRSPLFQNVPEDAMREALKVVTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVS----LGGRERVL-GDIYAPG 79 (231)
T ss_dssp HHHHHTSGGGTTCCHHHHHHHHHTEEEEEECTTCBCCCTTCTTTCEEEECSSEEEEEEEC----C--CEEEE-EEEESSE
T ss_pred HHHHhcChhhccCCHHHHHHHHHhcEEEEECCCCEEEeCCCCCCeEEEEEecEEEEEEEC----CCCceEEE-EecCCCC
Confidence 467899999999999999999999999999999999999999999999999999999876 36777665 8899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||..+ +. + .++..+++|+++|+++.|++++|.+++.++
T Consensus 80 ~~G~~~~---~~-----~-~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~ 119 (231)
T 3e97_A 80 VVGETAV---LA-----H-QERSASVRALTPVRTLMLHREHFELILRRH 119 (231)
T ss_dssp EESTTTT---TC-----C-CCCCEEEEESSCEEEEEECHHHHHHHHHHC
T ss_pred EEeeHHH---hC-----C-CCceEEEEECCcEEEEEEeHHHHHHHHHHC
Confidence 9999854 22 2 347789999999999999999999998764
No 18
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=99.76 E-value=1.7e-18 Score=149.24 Aligned_cols=116 Identities=14% Similarity=0.176 Sum_probs=101.7
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.++|+++|+|++|++++++.+++.++.+.|++|++|+++||+.+++|||++|.|+++..+ .+|++..+ ..++|||
T Consensus 8 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~----~~G~~~~~-~~~~~g~ 82 (227)
T 3dkw_A 8 QQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLT----PEGQEKIL-EVTNERN 82 (227)
T ss_dssp HHHHTTSTTTSSSCHHHHHHHHTSCEEEECCTTEEEECTTSBCCEEEEEEESCEECCBCC----GGGCCBCC-CEECTTE
T ss_pred HHHHhcChhhcCCCHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeCEEEEEEEC----CCCCEEEE-EEcCCCC
Confidence 456899999999999999999999999999999999999999999999999999998766 36676555 7899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||..+ + .+.|.+.++++|+++|+++.+++++|.++++++
T Consensus 83 ~~G~~~~---~-----~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~ 123 (227)
T 3dkw_A 83 TFAEAMM---F-----MDTPNYVATAQAVVPSQLFRFSNKAYLRQLQDN 123 (227)
T ss_dssp EESCTTT---T-----TTCSBCSSCEEESSCCEEEEEESHHHHHHHSSC
T ss_pred EeeeHHh---c-----CCCCCCceEEEEcCcEEEEEEeHHHHHHHHHHC
Confidence 9999754 2 223437789999999999999999999998764
No 19
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=99.76 E-value=7e-18 Score=144.72 Aligned_cols=114 Identities=16% Similarity=0.110 Sum_probs=99.6
Q ss_pred hhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCce
Q 023527 152 DPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDF 231 (281)
Q Consensus 152 dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDf 231 (281)
++|+++|+|+.|++++++.+.+.++.+.|+||++|+++||+.+++|||++|.|+++..+ .+|++..+ ..++|||+
T Consensus 3 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~----~~G~~~~~-~~~~~G~~ 77 (220)
T 3dv8_A 3 SFENYFPLWNDLNTAQKKLISDNLITQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILS----DEGREITL-YRLFDMDM 77 (220)
T ss_dssp --CCSCGGGGTSCHHHHHHHHTTCEEEEECTTCEEEEGGGCCCEEEEEEESCEEEEEEC----TTSCEEEE-EEECTTCE
T ss_pred chHHhChhhhcCCHHHHHHHHhhCceEEeCCCCEEECCCCCcceEEEEEeceEEEEEEC----CCCCEEEE-EecCCCCe
Confidence 56899999999999999999999999999999999999999999999999999999876 36777655 88999999
Q ss_pred --echhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 232 --SGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 232 --fGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
|||..+ +. + .++..+++|+++|+++.+++++|.+++.++
T Consensus 78 ~~~g~~~~---~~-----~-~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~ 118 (220)
T 3dv8_A 78 CLLSASCI---MR-----S-IQFEVTIEAEKDTDLWIIPAEIYKGIMKDS 118 (220)
T ss_dssp ESGGGGGG---CT-----T-CCCCCEEEESSCEEEEEEEHHHHHHHHHHC
T ss_pred eehhHHHH---hC-----C-CCCceEEEEeeeeEEEEEEHHHHHHHHHHC
Confidence 688754 22 2 247789999999999999999999998765
No 20
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=99.75 E-value=5.9e-18 Score=147.30 Aligned_cols=115 Identities=11% Similarity=0.082 Sum_probs=102.4
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.++|+++|+|+.|++++++.+.+.++.+.|+||++|+++||+.+++|||++|.|+++..+ .+|++..+ ..++|||
T Consensus 10 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~----~~G~~~~~-~~~~~G~ 84 (237)
T 3fx3_A 10 KAIARNSLLIRSLPEQHVDALLSQAVWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMT----PTGSEAVV-SVFTRGE 84 (237)
T ss_dssp HHHHTTSHHHHTSCHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEEEC----TTSCEEEE-EEEETTE
T ss_pred HHHHhCCHhhccCCHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEEC----CCCCEEEE-EEeCCCC
Confidence 456999999999999999999999999999999999999999999999999999999876 37777665 8899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||..+ +. + .++.++++|+++|+++.|++++|.+++.++
T Consensus 85 ~~G~~~~---~~-----~-~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~ 124 (237)
T 3fx3_A 85 SFGEAVA---LR-----N-TPYPVSAEAVTPCEVMHIPSPVFVSLMRRD 124 (237)
T ss_dssp EECHHHH---HH-----T-CCCSSEEEESSSEEEEEEEHHHHHHHHHHC
T ss_pred EechHHH---hc-----C-CCCCceEEECCceEEEEEcHHHHHHHHHHC
Confidence 9999865 22 1 246789999999999999999999998764
No 21
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=99.75 E-value=5.2e-18 Score=135.34 Aligned_cols=107 Identities=21% Similarity=0.285 Sum_probs=94.3
Q ss_pred hhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCce
Q 023527 152 DPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDF 231 (281)
Q Consensus 152 dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDf 231 (281)
++|+++|+|+.|++++++.+++.++.+.|++|++|+++||+.+++|||++|.|+++..+ . ..++|||+
T Consensus 11 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~-------~-----~~~~~G~~ 78 (138)
T 1vp6_A 11 QLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN-------P-----VELGPGAF 78 (138)
T ss_dssp HHHTTCGGGGGCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEECSSS-------C-----EEECTTCE
T ss_pred HHHHhChhhhcCCHHHHHHHHHhhcEEEeCCCCEEEeCCCCcceEEEEEeeEEEEEeCC-------c-----ceECCCCE
Confidence 45899999999999999999999999999999999999999999999999999986532 2 46899999
Q ss_pred echhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 232 SGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 232 fGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
|||..+ +. + .++..+++|+++|+++.|++++|+++++++
T Consensus 79 ~G~~~~---~~-----~-~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~ 117 (138)
T 1vp6_A 79 FGEMAL---IS-----G-EPRSATVSAATTVSLLSLHSADFQMLCSSS 117 (138)
T ss_dssp ECHHHH---HH-----C-CCCSSCEEESSSEEEEEEEHHHHHHHHHHC
T ss_pred eeehHh---cc-----C-CCceeEEEECCCEEEEEECHHHHHHHHHHC
Confidence 999854 22 1 236689999999999999999999998865
No 22
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=99.75 E-value=1.1e-17 Score=137.20 Aligned_cols=110 Identities=19% Similarity=0.246 Sum_probs=96.6
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.++|+++|+|+.|++++++.|+..++.+.|++|++|+++||+++++|||++|.|+++. + | + .+ ..+++||
T Consensus 37 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~-----~-~--~~-~~~~~G~ 106 (154)
T 3pna_A 37 AKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV-N-----N-E--WA-TSVGEGG 106 (154)
T ss_dssp HHHHHHCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEEE-T-----T-E--EE-EEECTTC
T ss_pred HHHHHhChhhhhCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEecEEEEEE-C-----C-E--EE-EEecCCC
Confidence 3468999999999999999999999999999999999999999999999999999986 3 2 3 22 6799999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||..+ +. + .++.++++|+++|+++.|++++|.+++.++
T Consensus 107 ~fGe~~~---~~-----~-~~~~~~v~A~~~~~~~~i~~~~~~~ll~~~ 146 (154)
T 3pna_A 107 SFGELAL---IY-----G-TPRAATVKAKTNVKLWGIDRDSYRRILMGS 146 (154)
T ss_dssp EECCHHH---HH-----C-CCCSSEEEESSCEEEEEEEHHHHHHHTHHH
T ss_pred EeeehHh---hc-----C-CCcceEEEECcceEEEEEeHHHHHHHHHhC
Confidence 9999865 22 1 236789999999999999999999998875
No 23
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=99.75 E-value=8.8e-18 Score=154.00 Aligned_cols=115 Identities=11% Similarity=0.142 Sum_probs=101.4
Q ss_pred cchhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecC
Q 023527 149 KHKDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEG 228 (281)
Q Consensus 149 lp~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~ 228 (281)
...++|+++|+|+.|++++++.|++.++.+.|++|++|+++||+++++|||++|.|+++..+ .+|++ .+ ..+++
T Consensus 10 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~----~~g~~-~~-~~~~~ 83 (333)
T 4ava_A 10 ARVEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVG----DDGVA-II-ARALP 83 (333)
T ss_dssp CCHHHHTTSGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCCEEEEEECCEEEEEEC----TTCCE-EE-EEECT
T ss_pred hhHHHHhCCHhHhcCCHHHHHHHHhhCeEEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEEC----CCCcE-EE-EEecC
Confidence 34578999999999999999999999999999999999999999999999999999999877 36665 44 78999
Q ss_pred CceechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 229 GDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 229 GDffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
||+|||.++ +. + .++++|++|+++|+++.|++++|++++ ++
T Consensus 84 G~~fGe~~l---~~-----~-~~~~~~v~A~~~~~~~~i~~~~~~~l~-~~ 124 (333)
T 4ava_A 84 GMIVGEIAL---LR-----D-SPRSATVTTIEPLTGWTGGRGAFATMV-HI 124 (333)
T ss_dssp TCEESHHHH---HH-----T-CBCSSEEEESSCEEEEEECHHHHHHHH-HS
T ss_pred CCEeeHHHh---cC-----C-CCceEEEEEecCEEEEEEcHHHHHHHH-hC
Confidence 999999865 22 1 247789999999999999999999998 54
No 24
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=99.73 E-value=5e-18 Score=135.81 Aligned_cols=109 Identities=15% Similarity=0.210 Sum_probs=94.9
Q ss_pred hhhhcCCCCCCCCHHHHHHHhhcceeEEec-CCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 152 DPILLVEEFGNLDGSSLEKLCDVVKPAVFT-ERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 152 dlLr~vplF~~L~e~~L~~I~~~l~~~~y~-kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
++|+++|+|+.|++++++.|+..++.+.|+ +|++|+++||+.+++|||++|.|+++. . +|++ .++++||
T Consensus 16 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~-~-----~g~~----~~l~~G~ 85 (134)
T 2d93_A 16 EFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGTVEISH-P-----DGKV----ENLFMGN 85 (134)
T ss_dssp HHHHHSSTTTSSCHHHHHHHTTTEEEEEECSSSCEEECTTCEECEEEECCBSCEEEEC-S-----SSCE----EEECTTC
T ss_pred HHHhCCcchhhCCHHHHHHHHHhheEEEecCCCCEEEeCCCCCCeEEEEEeCEEEEEc-C-----CCcE----EEecCCC
Confidence 458999999999999999999999999999 999999999999999999999999886 3 4554 4589999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEE-EEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTI-QALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV-~Altdvell~L~~edL~~l~~~f 279 (281)
+|||..+ + .+ .++.+++ +|+++|+++.|++++|+++++++
T Consensus 86 ~fG~~~~---~-----~~-~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~ 126 (134)
T 2d93_A 86 SFGITPT---L-----DK-QYMHGIVRTKVDDCQFVCIAQQDYWRILNHV 126 (134)
T ss_dssp EESCCSS---S-----CC-EECCSEEEESSSSEEEEEEEHHHHHHHSSCC
T ss_pred ccChhHh---c-----CC-CcceeEEEEEecceEEEEEeHHHHHHHHHHH
Confidence 9999754 2 12 2355678 99999999999999999998765
No 25
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=99.72 E-value=2.2e-17 Score=143.23 Aligned_cols=110 Identities=15% Similarity=0.182 Sum_probs=94.4
Q ss_pred cCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechh
Q 023527 156 LVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEE 235 (281)
Q Consensus 156 ~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~ 235 (281)
++|+|+.|++++++.+.+.++.+.|+||++|+++||+.+++|||++|.|+++..+ .+|++..+ ..++|||+|||.
T Consensus 14 ~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~----~~g~~~~~-~~~~~G~~~G~~ 88 (232)
T 2gau_A 14 LRDVWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREG----VYGRFHIS-RIVKPGQFFGMR 88 (232)
T ss_dssp SHHHHTTCCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC---------CCCEE-EEECTTCEESHH
T ss_pred ccHhhhcCCHHHHHHHHhhCeEEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEEC----CCCCEEEE-EEeCCCCEeeee
Confidence 6799999999999999999999999999999999999999999999999998765 25676655 889999999998
Q ss_pred hHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 236 LIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 236 lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
.+ +. + .++.++++|+++|+++.|++++|++++.++
T Consensus 89 ~~---~~-----~-~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~ 123 (232)
T 2gau_A 89 PY---FA-----E-ETCSSTAIAVENSKVLAIPVEAIEALLKGN 123 (232)
T ss_dssp HH---HH-----T-SCCSSEEEESSCEEEEEEEHHHHHHHHHHC
T ss_pred hh---hC-----C-CCcceEEEEecceEEEEEEHHHHHHHHHHC
Confidence 55 22 1 246789999999999999999999998764
No 26
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=99.72 E-value=8.2e-17 Score=137.07 Aligned_cols=109 Identities=15% Similarity=0.136 Sum_probs=92.3
Q ss_pred CCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhH
Q 023527 158 EEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELI 237 (281)
Q Consensus 158 plF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL 237 (281)
++++.+++++++.+.+.++.+.|+||++|+++||+.+++|||++|.|+++..+ .+|++..+ ..++|||+|||..+
T Consensus 2 ~l~~~l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~----~~g~~~~~-~~~~~g~~~G~~~~ 76 (210)
T 3ryp_A 2 VLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKD----EEGKEMIL-SYLNQGDFIGELGL 76 (210)
T ss_dssp -----CCCHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEEC----TTCCEEEE-EEEETTCEESCTTT
T ss_pred cCCCcCCHHHHHHHHHhcEEEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEEC----CCCCEEEE-EEcCCCCEeeeHHH
Confidence 67888999999999999999999999999999999999999999999999876 36777665 88999999999854
Q ss_pred HHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 238 AWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 238 ~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+ .+.+++.++++|+++|+++.+++++|.++++++
T Consensus 77 ---~-----~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~ 110 (210)
T 3ryp_A 77 ---F-----EEGQERSAWVRAKTACEVAEISYKKFRQLIQVN 110 (210)
T ss_dssp ---T-----STTCBCSSEEEESSCEEEEEEEHHHHHHHHHHC
T ss_pred ---h-----cCCCCceEEEEECCcEEEEEEcHHHHHHHHHHC
Confidence 2 223357789999999999999999999998765
No 27
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=99.71 E-value=5.3e-17 Score=140.96 Aligned_cols=110 Identities=20% Similarity=0.224 Sum_probs=96.0
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.++|+++|+|++|++++++.+++.++.+.|++|++|+++||+++++|||++|.|+++.. + +. + ..++|||
T Consensus 6 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~~------~-~~--~-~~~~~g~ 75 (246)
T 3of1_A 6 EKSIRNNFLFNKLDSDSKRLVINCLEEKSVPKGATIIKQGDQGDYFYVVEKGTVDFYVN------D-NK--V-NSSGPGS 75 (246)
T ss_dssp HHHHHTCTTTTTSCHHHHHHHHTTCEEEEECTTCEEECTTCCCCEEEEEEECCEEEEST------T-SC--C-EEECTTC
T ss_pred HHHHhcCHhhHhCCHHHHHHHHHhhceEEECCCCEEEecCCCCCEEEEEEeeEEEEEEC------C-EE--E-EecCCCC
Confidence 45689999999999999999999999999999999999999999999999999998752 2 32 2 6799999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||.++ +. + .++++|++|.++|+++.|++++|..++.++
T Consensus 76 ~fGe~~l---~~-----~-~~~~~tv~a~~~~~~~~i~~~~~~~~~~~~ 115 (246)
T 3of1_A 76 SFGELAL---MY-----N-SPRAATVVATSDCLLWALDRLTFRKILLGS 115 (246)
T ss_dssp EECHHHH---HH-----T-CCCSSEEEESSCEEEEEEEHHHHHHTTTTT
T ss_pred eeehhHH---hc-----C-CCCCcEEEECCCeEEEEEEhHHHHHHHHHh
Confidence 9999865 22 1 246789999999999999999999987654
No 28
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.1e-16 Score=138.98 Aligned_cols=136 Identities=18% Similarity=0.251 Sum_probs=112.0
Q ss_pred hhhhhheehhhhhhhhHHHHHHHhhcc-------hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeE
Q 023527 124 FRRYLPCFQWSLQALRLRLTFILSNKH-------KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQM 196 (281)
Q Consensus 124 ~~~~~~~~~Wg~~~~st~f~~ll~~lp-------~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~m 196 (281)
+...-.|-.|.+.+-. |..++..-| ..+++++|+|+.+++++++.++..++.+.|++|++|+++||+++.+
T Consensus 92 v~a~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~ 169 (246)
T 3of1_A 92 VVATSDCLLWALDRLT--FRKILLGSSFKKRLMYDDLLKSMPVLKSLTTYDRAKLADALDTKIYQPGETIIREGDQGENF 169 (246)
T ss_dssp EEESSCEEEEEEEHHH--HHHTTTTTTSHHHHHSHHHHHHCGGGTTCCHHHHHHHHHTCEEEEECTTCEEECTTSBCCEE
T ss_pred EEECCCeEEEEEEhHH--HHHHHHHhHHHHHHHHHHHHhhChhhhcCCHHHHHHHHHhhheEEeCCCCEEEeCCCcCCEE
Confidence 4455667777777633 444444434 4568999999999999999999999999999999999999999999
Q ss_pred EEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHH
Q 023527 197 LFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVL 276 (281)
Q Consensus 197 yfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~ 276 (281)
|||.+|.++++..+ ++ .+ ..+++||+|||..+ +. + .++++||+|+++|+++.|++++|++++
T Consensus 170 y~I~~G~v~v~~~~-----~~---~~-~~l~~g~~fGe~~~---~~-----~-~~~~~~v~a~~~~~~~~i~~~~f~~ll 231 (246)
T 3of1_A 170 YLIEYGAVDVSKKG-----QG---VI-NKLKDHDYFGEVAL---LN-----D-LPRQATVTATKRTKVATLGKSGFQRLL 231 (246)
T ss_dssp EEEEECEEEEEETT-----TE---EE-EEEETTCEECHHHH---HH-----T-CBCSSEEEESSCEEEEEEEHHHHHHHC
T ss_pred EEEEecEEEEEEcC-----Cc---eE-EEcCCCCcccHHHH---hC-----C-CCcccEEEECCCEEEEEEeHHHHHHHh
Confidence 99999999998866 33 23 78999999999865 22 2 246789999999999999999999998
Q ss_pred hhh
Q 023527 277 LNI 279 (281)
Q Consensus 277 ~~f 279 (281)
..+
T Consensus 232 ~~~ 234 (246)
T 3of1_A 232 GPA 234 (246)
T ss_dssp TTH
T ss_pred ccH
Confidence 765
No 29
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=99.69 E-value=2.4e-16 Score=142.08 Aligned_cols=110 Identities=22% Similarity=0.288 Sum_probs=96.5
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.++|+++|+|+.|++++++.|++.++.+.|++|++|+++||+++.+|||++|.|++.. +|+ .+ ..+.|||
T Consensus 38 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~-------~g~--~~-~~~~~G~ 107 (299)
T 3shr_A 38 KEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK-------EGV--KL-CTMGPGK 107 (299)
T ss_dssp HHHHHTCTTTTTSCHHHHHHHHHHCEEEEECTTCEEECTTCBCCCEEEEEESCEEEEE-------TTE--EE-EEECTTC
T ss_pred HHHHhhCHHHHcCCHHHHHHHHHhcCeEEECCCCEEEcCCCcCceEEEEEEEEEEEEE-------CCE--EE-EEeCCCC
Confidence 4468999999999999999999999999999999999999999999999999999854 333 23 7899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||.++ +. + .++++||+|+++|+++.|++++|++++.++
T Consensus 108 ~fGe~~l---l~-----~-~~~~~tv~a~~~~~l~~i~~~~~~~i~~~~ 147 (299)
T 3shr_A 108 VFGELAI---LY-----N-CTRTATVKTLVNVKLWAIDRQCFQTIMMRT 147 (299)
T ss_dssp EESCSGG---GT-----T-TBCCSEEEESSCEEEEEECHHHHHHHHHHH
T ss_pred eeeHhHH---hc-----C-CCCCcEEEEcCCeEEEEEcHHHHHHHhhHh
Confidence 9999865 21 2 347799999999999999999999998765
No 30
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=99.69 E-value=4.4e-17 Score=140.49 Aligned_cols=106 Identities=11% Similarity=0.193 Sum_probs=95.7
Q ss_pred hhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCce
Q 023527 152 DPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDF 231 (281)
Q Consensus 152 dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDf 231 (281)
.+|+++|+|+.|++++++.+++.++.+.|+||++|+++||+.+++|||++|.|+++... +|++..+ ..++|||+
T Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~-----~G~~~~~-~~~~~G~~ 77 (220)
T 2fmy_A 4 MRLTDTNLLEVLNSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFLVKSGRVRVYLAY-----EDKEFTL-AILEAGDI 77 (220)
T ss_dssp TCSCSSCHHHHTTSGGGTTTGGGSEEEEECTTCEEECTTCSSCEEEEEEESEEEEEEEC-----SSCEEEE-EEEETTCE
T ss_pred hhhhcChhhhcCCHHHHHHHHHhhheeEeCCCCEEECCCCCCCeEEEEEecEEEEEECC-----CCCEEEE-EEcCCCCE
Confidence 45799999999999999999999999999999999999999999999999999996433 7777665 88999999
Q ss_pred echhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 232 SGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 232 fGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
||| ++.++++|+++|+++.|++++|.++++++
T Consensus 78 ~G~----------------~~~~~~~A~~~~~v~~i~~~~~~~l~~~~ 109 (220)
T 2fmy_A 78 FCT----------------HTRAFIQAMEDTTILYTDIRNFQNIVVEF 109 (220)
T ss_dssp EES----------------CSSSEEEESSSEEEEEEEHHHHHHHHHHC
T ss_pred eCC----------------ccceEEEEcCcEEEEEEeHHHHHHHHHHC
Confidence 998 14578999999999999999999998765
No 31
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=99.69 E-value=1e-16 Score=144.62 Aligned_cols=141 Identities=19% Similarity=0.314 Sum_probs=116.6
Q ss_pred hhhhhheehhhhhhhhHHHHHHHhhcc-------hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeE
Q 023527 124 FRRYLPCFQWSLQALRLRLTFILSNKH-------KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQM 196 (281)
Q Consensus 124 ~~~~~~~~~Wg~~~~st~f~~ll~~lp-------~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~m 196 (281)
++..-.|-.|.+.+-. |..++...| .++++++|+|+.+++++++.++..++.+.|++|++|+++||+++.+
T Consensus 124 v~a~~~~~l~~i~~~~--~~~i~~~~~~~~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~I~~~G~~~~~~ 201 (299)
T 3shr_A 124 VKTLVNVKLWAIDRQC--FQTIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTF 201 (299)
T ss_dssp EEESSCEEEEEECHHH--HHHHHHHHHHHHHHHHHHHHTTSHHHHHSCHHHHHHHTTTCEEEEECTTCEEECTTCEECEE
T ss_pred EEEcCCeEEEEEcHHH--HHHHhhHhHHHHHHHHHHHHhhCHHhhhCCHHHHHHHHHhccEEEECCCCEEEeCCCCCCEE
Confidence 4566678888888744 455544444 3458999999999999999999999999999999999999999999
Q ss_pred EEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHH
Q 023527 197 LFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVL 276 (281)
Q Consensus 197 yfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~ 276 (281)
|||++|.|+++..+ ..+|++..+ ..+++||+|||..+ +. + .++++||+|+++|+++.|++++|.+++
T Consensus 202 yiI~~G~v~~~~~~---~~~g~~~~~-~~l~~G~~fGe~~l---l~-----~-~~~~~tv~a~~~~~l~~i~~~~f~~ll 268 (299)
T 3shr_A 202 FIISKGKVNVTRED---SPNEDPVFL-RTLGKGDWFGEKAL---QG-----E-DVRTANVIAAEAVTCLVIDRDSFKHLI 268 (299)
T ss_dssp EEEEESEEEEEECC---SSSCCCEEE-EEEETTCEECGGGG---SS-----S-EECSSEEEESSSEEEEEEEHHHHHHHH
T ss_pred EEEEeeEEEEEEec---CCCCcceEE-EEcCCCCEeChHHH---hC-----C-CCcceEEEECCCEEEEEEeHHHHHHHH
Confidence 99999999998764 115565555 88999999999865 22 2 246799999999999999999999999
Q ss_pred hhh
Q 023527 277 LNI 279 (281)
Q Consensus 277 ~~f 279 (281)
.++
T Consensus 269 ~~~ 271 (299)
T 3shr_A 269 GGL 271 (299)
T ss_dssp TTC
T ss_pred ccH
Confidence 875
No 32
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=99.69 E-value=2.9e-16 Score=140.57 Aligned_cols=141 Identities=18% Similarity=0.207 Sum_probs=111.4
Q ss_pred hhhhhheehhhhhhhhHHHHHHHh-------hcchhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeE
Q 023527 124 FRRYLPCFQWSLQALRLRLTFILS-------NKHKDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQM 196 (281)
Q Consensus 124 ~~~~~~~~~Wg~~~~st~f~~ll~-------~lp~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~m 196 (281)
+...-.|-.|.+..-. |.-++. .+-..+++++++|+.++++++..++..++...|++|++|+++||+++.+
T Consensus 124 v~a~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~l~~~~lf~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~ 201 (291)
T 2qcs_B 124 VKAKTNVKLWGIDRDS--YRRILMGSTLRKRKMYEEFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEF 201 (291)
T ss_dssp EEESSCEEEEEEEHHH--HHHHHHHHHHHHHHHHHHHHHTCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEE
T ss_pred EEECCCEEEEEEEhHH--HHHHHhhhHHHHHHHHHHHHhhchHhhhCCHHHHHHHHhhcEEEEECCCCEEEeCCccCCEE
Confidence 3445556666666532 333332 3334568999999999999999999999999999999999999999999
Q ss_pred EEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHH
Q 023527 197 LFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVL 276 (281)
Q Consensus 197 yfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~ 276 (281)
|||++|.|+++... ..|++...+ ..++|||+|||..+ +. +. ++++|++|.++|+++.|++++|.+++
T Consensus 202 y~i~~G~v~~~~~~---~~~~~~~~~-~~l~~G~~fGe~~l---l~-----~~-~~~~tv~a~~~~~~~~i~~~~f~~~l 268 (291)
T 2qcs_B 202 FIILEGSAAVLQRR---SENEEFVEV-GRLGPSDYFGEIAL---LM-----NR-PKAATVVARGPLKCVKLDRPRFERVL 268 (291)
T ss_dssp EEEEEEEEEEEEEC---STTSCEEEE-EEECTTCEECSGGG---TC-----CC-CCSSEEEEEEEEEEEEEEHHHHHHHH
T ss_pred EEEEeCEEEEEEec---CCCCccEEE-EEeCCCCEecHHHH---cC-----CC-CcceEEEECCcEEEEEEcHHHHHHHh
Confidence 99999999998765 113343334 88999999999865 21 22 47799999999999999999999998
Q ss_pred hhh
Q 023527 277 LNI 279 (281)
Q Consensus 277 ~~f 279 (281)
.++
T Consensus 269 ~~~ 271 (291)
T 2qcs_B 269 GPC 271 (291)
T ss_dssp CCH
T ss_pred ccH
Confidence 765
No 33
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=99.69 E-value=3.9e-16 Score=132.56 Aligned_cols=104 Identities=16% Similarity=0.191 Sum_probs=90.4
Q ss_pred CCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhc
Q 023527 163 LDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKA 242 (281)
Q Consensus 163 L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~ 242 (281)
|++++++.+++.++.+.|+||++|+++||+.+++|||++|.|+++..+ .+|++..+ ..++|||+|||..+ +
T Consensus 1 l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~----~~G~~~~~-~~~~~g~~~G~~~~---~- 71 (207)
T 2oz6_A 1 MKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIED----DDGREMII-GYLNSGDFFGELGL---F- 71 (207)
T ss_dssp CCHHHHHHHHHSSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEEC----TTSCEEEE-EEEETTCEESCTTT---C-
T ss_pred CCHHHHHHHHhhcceEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEEC----CCCCEEEE-EEcCCCCCcccHHH---h-
Confidence 689999999999999999999999999999999999999999999876 36777665 88999999999754 2
Q ss_pred CCCCCCCC---CcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 243 GHNSSNLP---ISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 243 ~~s~~~~p---~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
.+.+ ++.++++|+++|+++.|++++|.++++++
T Consensus 72 ----~~~~~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~ 107 (207)
T 2oz6_A 72 ----EKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQD 107 (207)
T ss_dssp ----C-----CBCCSEEEESSCEEEEEEEHHHHHHHHHHC
T ss_pred ----cCCCCCCCcceEEEECCcEEEEEECHHHHHHHHHHC
Confidence 2222 47789999999999999999999998764
No 34
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=99.68 E-value=1.8e-16 Score=152.04 Aligned_cols=114 Identities=15% Similarity=0.185 Sum_probs=101.8
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.+.|+++|+|++|++++++.|++.++.+.|++|++|+++||+++++|||++|.|+++... +|++..+ ..+++||
T Consensus 144 ~~~L~~~~lF~~L~~~~l~~l~~~~~~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~~~-----~G~~~~v-~~l~~G~ 217 (416)
T 3tnp_B 144 QEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKC-----DGVGRCV-GNYDNRG 217 (416)
T ss_dssp HHHHTTSHHHHTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECEEEEEEEC-----SSCEEEE-EEEESCC
T ss_pred HHHHhCCHhHhcCCHHHHHHHHHhcEEEEeCCCCEEEeCCCCCceEEEEEeeEEEEEEec-----CCCEEEE-EEecCCC
Confidence 456899999999999999999999999999999999999999999999999999998855 6776655 8899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||.++ +. + .++.+||+|+++|+++.|++++|..++.++
T Consensus 218 ~fGe~al---l~-----~-~pr~atv~A~~d~~l~~i~r~~f~~ll~~~ 257 (416)
T 3tnp_B 218 SFGELAL---MY-----N-TPKAATITATSPGALWGLDRVTFRRIIVKN 257 (416)
T ss_dssp EECGGGG---TS-----C-CCCSSEEEESSSEEEEEEEHHHHHHHHHHH
T ss_pred EEeeHHH---hc-----C-CCcccEEEEccCeEEEEEeehhhhhhhhcc
Confidence 9999865 22 2 247799999999999999999999998764
No 35
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=99.66 E-value=8.2e-16 Score=136.98 Aligned_cols=108 Identities=15% Similarity=0.143 Sum_probs=90.3
Q ss_pred CCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHH
Q 023527 159 EFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIA 238 (281)
Q Consensus 159 lF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~ 238 (281)
+...+++++++.+++.++.+.|+||++|+++||+++++|||++|.|+++..+ .+|++..+ ..++|||+|||..+
T Consensus 53 ~~~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~----~~G~e~~~-~~~~~G~~~Ge~~~- 126 (260)
T 3kcc_A 53 LGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKD----EEGKEMIL-SYLNQGDFIGELGL- 126 (260)
T ss_dssp ------CHHHHHHHTTSEEEEECTTCEEECTTCBCCEEEEEEECEEEEEEEC----TTCCEEEE-EEEETTCEESCTTT-
T ss_pred HcCCCCHHHHHHHHhhCEEEEECCCCEEECCCCcCCeEEEEEeCEEEEEEEC----CCCCEEEE-EEcCCCCEEeehHH-
Confidence 3466999999999999999999999999999999999999999999999876 36777655 88999999999854
Q ss_pred HhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 239 WAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 239 w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+ .+.++++++++|+++|+++.|++++|.+++.++
T Consensus 127 --~-----~~~~~~~~~~~A~~~~~l~~i~~~~~~~l~~~~ 160 (260)
T 3kcc_A 127 --F-----EEGQERSAWVRAKTACEVAEISYKKFRQLIQVN 160 (260)
T ss_dssp --T-----STTCBCCSEEEESSCEEEEEEEHHHHHHHHHHC
T ss_pred --h-----CCCCCCceEEEECCCeEEEEEcHHHHHHHHHHC
Confidence 2 223357789999999999999999999998765
No 36
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=99.66 E-value=5.7e-16 Score=138.64 Aligned_cols=110 Identities=19% Similarity=0.246 Sum_probs=96.3
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.++|+++|+|+.|++++++.|++.++.+.|++|++|+++||+++++|||++|.|++.. + | + .+ ..+++||
T Consensus 38 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~-----g-~--~~-~~l~~G~ 107 (291)
T 2qcs_B 38 AKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV-N-----N-E--WA-TSVGEGG 107 (291)
T ss_dssp HHHTTTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEEE-T-----T-E--EE-EEECTTC
T ss_pred HHHHhcChhhhhCCHHHHHHHHHhccEEEECCCCEEEeCCCCCceEEEEeeeEEEEEE-C-----C-e--EE-EEcCCCC
Confidence 3458999999999999999999999999999999999999999999999999999887 4 3 3 23 7899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||..+ +. + .++.+|++|+++|+++.|++++|..++.++
T Consensus 108 ~fGe~~l---~~-----~-~~~~~tv~a~~~~~~~~i~~~~~~~~~~~~ 147 (291)
T 2qcs_B 108 SFGELAL---IY-----G-TPRAATVKAKTNVKLWGIDRDSYRRILMGS 147 (291)
T ss_dssp EECGGGG---TC-----C-CBCSSEEEESSCEEEEEEEHHHHHHHHHHH
T ss_pred ccchHHH---hc-----C-CCCceEEEECCCEEEEEEEhHHHHHHHhhh
Confidence 9999765 21 2 246799999999999999999999998754
No 37
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=99.65 E-value=1.5e-16 Score=137.44 Aligned_cols=104 Identities=16% Similarity=0.107 Sum_probs=94.1
Q ss_pred hhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 154 ILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 154 Lr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
|+++|+|+.|++++++.+++.++.+.|+||++|+++||+.+++|||++|.|+++... +|++..+ ..++|||+||
T Consensus 2 l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~-----~G~~~~~-~~~~~G~~fG 75 (222)
T 1ft9_A 2 PPRFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVG-----EEREISL-FYLTSGDMFC 75 (222)
T ss_dssp CCCCCTHHHHTSTTTTTTTTTCEEEEECTTCEEECTTCCCCCEEEEEESEEEEEEEE-----TTEEEEE-EEEETTCEEE
T ss_pred cccchhhhcCCHHHHHHHHhhCcEEEECCCCEEECCCCCCCeEEEEEecEEEEEECC-----CCCEEEE-EEcCCCCEec
Confidence 688999999999999999999999999999999999999999999999999997333 6777665 8899999999
Q ss_pred hhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 234 EELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 234 E~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
. ++.++++|+++|+++.|++++|.+++.++
T Consensus 76 -~---------------~~~~~~~A~~~~~v~~i~~~~~~~l~~~~ 105 (222)
T 1ft9_A 76 -M---------------HSGCLVEATERTEVRFADIRTFEQKLQTC 105 (222)
T ss_dssp -S---------------CSSCEEEESSCEEEEEECHHHHHHHHHHC
T ss_pred -C---------------CCCEEEEEccceEEEEEeHHHHHHHHHHC
Confidence 1 25689999999999999999999998765
No 38
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=99.65 E-value=8.6e-18 Score=157.06 Aligned_cols=107 Identities=21% Similarity=0.280 Sum_probs=0.0
Q ss_pred hhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 153 PILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 153 lLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
.++++|+|+++++++++++++.++.+.|+|||+|++|||+.+++|||.+|++++...+ . ..++|||+|
T Consensus 229 ~l~~~~lf~~ls~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~-------~-----~~l~~G~~f 296 (355)
T 3beh_A 229 LVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN-------P-----VELGPGAFF 296 (355)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhcccccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeeEEEEEECC-------e-----eEECCCCEE
Confidence 4899999999999999999999999999999999999999999999999999987644 1 458999999
Q ss_pred chhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhhc
Q 023527 233 GEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNID 280 (281)
Q Consensus 233 GE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f~ 280 (281)
||..+ +. + .+++++++|+++|+++.+++++|+++++++.
T Consensus 297 Ge~~~---l~-----~-~~~~~~~~A~~~~~l~~i~~~~f~~ll~~~p 335 (355)
T 3beh_A 297 GEMAL---IS-----G-EPRSATVSAATTVSLLSLHSADFQMLCSSSP 335 (355)
T ss_dssp ------------------------------------------------
T ss_pred eehHH---hC-----C-CCcceEEEECccEEEEEEeHHHHHHHHHHCH
Confidence 99854 21 2 2467899999999999999999999998763
No 39
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=99.65 E-value=5.3e-16 Score=133.72 Aligned_cols=110 Identities=16% Similarity=0.184 Sum_probs=88.9
Q ss_pred CCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhh
Q 023527 157 VEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEEL 236 (281)
Q Consensus 157 vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~l 236 (281)
-|.|...++.+.+.+...++.+.|+||++|+++||+.+++|||++|.|+++..+ .+|++..+ ..++|||+|||..
T Consensus 4 ~~~~~~~~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~----~~G~~~~~-~~~~~G~~~G~~~ 78 (213)
T 1o5l_A 4 DKIHHHHHHMDLKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVS----ENGKTLEI-DEIKPVQIIASGF 78 (213)
T ss_dssp ---------CCGGGGGGGSEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEEC----TTSCEEEE-EEECSSEESSGGG
T ss_pred cccchhhccCCHHHHhcccEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEEC----CCCCEEEE-EEecCCCEeeeHH
Confidence 488999999999999999999999999999999999999999999999999876 36777665 8899999999985
Q ss_pred HHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 237 IAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 237 L~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+ + .+.+++..+++|+++|+++.|++++|.++++++
T Consensus 79 ~---~-----~~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~ 113 (213)
T 1o5l_A 79 I---F-----SSEPRFPVNVVAGENSKILSIPKEVFLDLLMKD 113 (213)
T ss_dssp T---T-----SSSCBCSSEEEESSSEEEEEEEHHHHHHHHHHC
T ss_pred H---h-----cCCCCceEEEEEccceEEEEEeHHHHHHHHHHC
Confidence 4 2 222357789999999999999999999998764
No 40
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=99.65 E-value=9.8e-16 Score=146.84 Aligned_cols=140 Identities=17% Similarity=0.241 Sum_probs=113.8
Q ss_pred hhhhhheehhhhhhhhHHHHHHHhhcc-------hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeE
Q 023527 124 FRRYLPCFQWSLQALRLRLTFILSNKH-------KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQM 196 (281)
Q Consensus 124 ~~~~~~~~~Wg~~~~st~f~~ll~~lp-------~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~m 196 (281)
++..-.|-.|.|.+-. |..++...| ..+++++|+|+.++++++..|++.++.+.|++|++|+++||+++.+
T Consensus 234 v~A~~d~~l~~i~r~~--f~~ll~~~~~~~~~~~~~~L~~v~lf~~Ls~~el~~L~~~l~~~~~~~Ge~I~~eGd~~~~~ 311 (416)
T 3tnp_B 234 ITATSPGALWGLDRVT--FRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQIIAQGDLADSF 311 (416)
T ss_dssp EEESSSEEEEEEEHHH--HHHHHHHHHHHHSSSSSSSGGGCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEE
T ss_pred EEEccCeEEEEEeehh--hhhhhhcchhHHHHHHHHHHhhchHhhcCCHHHHHHHHhhceEEEECCCCEEEeCCCcCCEE
Confidence 4566778889988844 444443333 3469999999999999999999999999999999999999999999
Q ss_pred EEEEEcEEEEEEeccccccC------CCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHH
Q 023527 197 LFVLQGKLWTYTSRRVTELS------SNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAY 270 (281)
Q Consensus 197 yfIl~G~V~v~~~~~~~~~g------Gr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~e 270 (281)
|||++|+|+++..+ .+ |++..+ ..+++||+|||..+ + .+. ++++||+|+++|+++.|+++
T Consensus 312 yiI~sG~v~v~~~~----~~~~~~~~g~~~~l-~~l~~G~~fGE~al---l-----~~~-~r~~tv~A~~~~~ll~I~~~ 377 (416)
T 3tnp_B 312 FIVESGEVKITMKR----KGKSEVEENGAVEI-ARCFRGQYFGELAL---V-----TNK-PRAASAHAIGTVKCLAMDVQ 377 (416)
T ss_dssp EEEEEEEEEEECC----------------CEE-EEECTTCEESGGGG---T-----CCS-CCSSEEEEEEEEEEEEEEHH
T ss_pred EEEEeCEEEEEEec----CCcccccCCceeEE-EEeCCCCEecHHHH---h-----CCC-CceeEEEEcCCeEEEEEEHH
Confidence 99999999998765 12 565555 88999999999866 2 222 47799999999999999999
Q ss_pred HHHHHHhhh
Q 023527 271 DLKQVLLNI 279 (281)
Q Consensus 271 dL~~l~~~f 279 (281)
+|.+++.++
T Consensus 378 ~f~~ll~~~ 386 (416)
T 3tnp_B 378 AFERLLGPC 386 (416)
T ss_dssp HHHHHHCCH
T ss_pred HHHHHhcch
Confidence 999998765
No 41
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=99.65 E-value=5.3e-16 Score=136.63 Aligned_cols=116 Identities=16% Similarity=0.094 Sum_probs=97.3
Q ss_pred hhcchhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeee
Q 023527 147 SNKHKDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHL 226 (281)
Q Consensus 147 ~~lp~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L 226 (281)
..+..+++.+...|..+++++++.+.+.++.+.|+||++|+++||+++++|||++|.|+++..+ .+|++..+ ..+
T Consensus 4 ~~m~~~~~~~~~p~~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~----~~G~~~~~-~~~ 78 (250)
T 3e6c_C 4 EGLGKDFCGAIIPDNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIF----EDGSEKLL-YYA 78 (250)
T ss_dssp -----CCCCCSSSBSCSCCGGGGGGGGGSEEEEECTTCEEECTTCCCCSEEEEEESCEEEEEEC----TTSCEEEE-EEE
T ss_pred cccchhhhhhccchhhCCHHHHHHHHhhCeEEEECCCCEEECCCCCCCeEEEEEeeEEEEEEEC----CCCCEEEE-EEe
Confidence 3444555555555699999999999999999999999999999999999999999999999876 37787666 889
Q ss_pred cCCceechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 227 EGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 227 ~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||+||| ++ . + . +.++++|+++|+++.+++++|.+++.++
T Consensus 79 ~~G~~~G~-~l----~-----~-~-~~~~~~A~~~~~v~~i~~~~~~~l~~~~ 119 (250)
T 3e6c_C 79 GGNSLIGK-LY----P-----T-G-NNIYATAMEPTRTCWFSEKSLRTVFRTD 119 (250)
T ss_dssp CTTCEECC-CS----C-----C-S-CCEEEEESSSEEEEEECHHHHHHHHHHC
T ss_pred cCCCEEee-ec----C-----C-C-CceEEEEcccEEEEEEcHHHHHHHHHHC
Confidence 99999999 44 1 1 3 6789999999999999999999998764
No 42
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=99.64 E-value=1.9e-15 Score=144.66 Aligned_cols=114 Identities=18% Similarity=0.144 Sum_probs=99.5
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCc--ceeeeeecC
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNS--GNLNNHLEG 228 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~--~~~~~~L~~ 228 (281)
.+.|+++|+|++|++++++.|+..++.+.|++|++|+++||+++++|||++|.|+++..+ .+|++ ..+ ..++|
T Consensus 41 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~----~~g~~~~~~~-~~~~~ 115 (469)
T 1o7f_A 41 FTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSE----TSSHQDAVTI-CTLGI 115 (469)
T ss_dssp HHHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEECS----SSCGGGCEEE-EEECT
T ss_pred HHHHhCCHhhhcCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCcEEEEEeeEEEEEEec----CCCCCcceEE-EEccC
Confidence 345899999999999999999999999999999999999999999999999999999876 25542 334 78999
Q ss_pred CceechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 229 GDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 229 GDffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
||+|||..+ . + .++++|++|+++|+++.|++++|..++.++
T Consensus 116 G~~fGe~~l----~-----~-~~~~~tv~A~~~~~l~~i~~~~~~~l~~~~ 156 (469)
T 1o7f_A 116 GTAFGESIL----D-----N-TPRHATIVTRESSELLRIEQEDFKALWEKY 156 (469)
T ss_dssp TCEECGGGG----G-----T-CBCSSEEEESSSEEEEEEEHHHHHHHHHHH
T ss_pred CCCcchhhh----C-----C-CCccceEEEccceeEEEEcHHHHHHHHHhC
Confidence 999999642 2 1 247799999999999999999999998765
No 43
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=99.63 E-value=6.3e-16 Score=146.16 Aligned_cols=142 Identities=16% Similarity=0.183 Sum_probs=115.6
Q ss_pred chhhhhheehhhhhhhhHHHHHHHhhcc-------hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCe
Q 023527 123 FFRRYLPCFQWSLQALRLRLTFILSNKH-------KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQ 195 (281)
Q Consensus 123 ~~~~~~~~~~Wg~~~~st~f~~ll~~lp-------~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~ 195 (281)
-++..-.|-.|.+.+-. |.-++..-| ..+++++|+|..++++++..+++.++.+.|++|++|+++||+++.
T Consensus 214 tv~A~~~~~l~~i~~~~--f~~ll~~~~~~~~~~~~~~L~~v~~f~~Ls~~el~~l~~~~~~~~~~~ge~I~~eGd~~~~ 291 (381)
T 4din_B 214 TVKAKTDLKLWGIDRDS--YRRILMGSTLRKRKMYEEFLSKVSILESLEKWERLTVADALEPVQFEDGEKIVVQGEPGDD 291 (381)
T ss_dssp EEEESSSCEEEEEEHHH--HHHHHHHHHHHHHHHHHHHHHHCSTTTTCCTTHHHHHHTTCBCCCBCSSCBSSCTTSBCCE
T ss_pred EEEECCCEEEEEEchHH--HHHhhhhhhHHHHHHHHHHhhhhHHHHhccHHHHHHHHHhhhhccCCCCCEEEeCCCcCCE
Confidence 35566778889988844 444443333 356899999999999999999999999999999999999999999
Q ss_pred EEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHH
Q 023527 196 MLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQV 275 (281)
Q Consensus 196 myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l 275 (281)
+|||++|+|+++..+ ..|++...+ ..+++||+|||..+ +. +. ++++||+|+++|+++.|++++|+.+
T Consensus 292 ~yiI~~G~v~v~~~~---~~~~~~~~v-~~l~~Gd~fGe~al---l~-----~~-~r~~tv~A~~~~~ll~i~~~~f~~l 358 (381)
T 4din_B 292 FYIITEGTASVLQRR---SPNEEYVEV-GRLGPSDYFGEIAL---LL-----NR-PRAATVVARGPLKCVKLDRPRFERV 358 (381)
T ss_dssp EEEEEESCEEEECCS---SSSSCCCEE-EEECTTCEECTTGG---GS-----CC-BCSSEEEESSCBEEEEEEHHHHHHH
T ss_pred EEEEEeCEEEEEEec---CCCCceEEE-EEeCCCCEechHHH---hC-----CC-CceeEEEEcCCEEEEEEeHHHHHHH
Confidence 999999999999765 113333333 78999999999866 22 22 4779999999999999999999999
Q ss_pred Hhhh
Q 023527 276 LLNI 279 (281)
Q Consensus 276 ~~~f 279 (281)
+..+
T Consensus 359 l~~~ 362 (381)
T 4din_B 359 LGPC 362 (381)
T ss_dssp HCCH
T ss_pred Hhhh
Confidence 8764
No 44
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=99.60 E-value=2.3e-15 Score=142.30 Aligned_cols=110 Identities=19% Similarity=0.245 Sum_probs=96.5
Q ss_pred hhhhhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 151 KDPILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 151 ~dlLr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
.+.|+++|+|++|++++++.|++.++.+.|++|++|+++||+++++|||++|.|+++. + | + .+ ..+++|+
T Consensus 129 ~~~l~~~~lF~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~-~-----~-~--~v-~~l~~G~ 198 (381)
T 4din_B 129 AKAISKNVLFAHLDDNERSDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVYV-N-----G-E--WV-TNISEGG 198 (381)
T ss_dssp HHHHTTCTTSSSCCHHHHHHHHHHCEEEECCTTCBSSCTTSBCCEEEECSSSEEEEEE-T-----T-E--EE-EEEESSC
T ss_pred HHHHhCChhhhcCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEeeEEEEEE-C-----C-e--Ee-eeCCCCC
Confidence 3468999999999999999999999999999999999999999999999999999986 2 2 3 22 6799999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
+|||.++ +. + .++++|++|+++|+++.|++++|..++.++
T Consensus 199 ~fGe~al---l~-----~-~~r~atv~A~~~~~l~~i~~~~f~~ll~~~ 238 (381)
T 4din_B 199 SFGELAL---IY-----G-TPRAATVKAKTDLKLWGIDRDSYRRILMGS 238 (381)
T ss_dssp CBCGGGG---TS-----C-CBCSSEEEESSSCEEEEEEHHHHHHHHHHH
T ss_pred EEEchHH---hc-----C-CCcceEEEECCCEEEEEEchHHHHHhhhhh
Confidence 9999865 22 2 247799999999999999999999998754
No 45
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=99.59 E-value=8.4e-15 Score=153.76 Aligned_cols=114 Identities=18% Similarity=0.168 Sum_probs=97.3
Q ss_pred hhcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 154 ILLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 154 Lr~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
|+++++|+++++.++.+||..++...|++|++||++||+++++|+|++|+|.+...+.. .++.+..+ ..++|||.||
T Consensus 44 Lk~~~~f~~l~~~~l~~l~~~m~ye~~~~Ge~IfrqGd~gd~fYIIlsGsV~V~i~~~~--~~~~~~~v-~~l~~G~sFG 120 (999)
T 4f7z_A 44 LKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETS--SHQDAVTI-CTLGIGTAFG 120 (999)
T ss_dssp HTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEECSSS--CTTSCEEE-EEEETTCEEC
T ss_pred HhCCHhhhcCCHHHHHHHHhheEEEEECCCCEEEcCCCcCCEEEEEEeeEEEEEEecCC--CCCCceeE-EEecCCcchh
Confidence 89999999999999999999999999999999999999999999999999999876411 02222233 7899999999
Q ss_pred hhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcHHHHHHHHhhhc
Q 023527 234 EELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMAYDLKQVLLNID 280 (281)
Q Consensus 234 E~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~edL~~l~~~f~ 280 (281)
|.++ . +.| +++||+|.++|+++.|++++|+.+..+|+
T Consensus 121 Eall----~-----n~p-RtaTv~a~~~s~l~~l~r~~F~~i~~~~~ 157 (999)
T 4f7z_A 121 ESIL----D-----NTP-RHATIVTRESSELLRIEQEDFKALWEKYR 157 (999)
T ss_dssp GGGG----G-----TCC-CSSEEEESSSEEEEEEEHHHHHHHHHHHH
T ss_pred hhhc----c-----CCC-cceEEEeccceEEEEEEHHHHHHHHHhCh
Confidence 9433 2 334 77999999999999999999999998763
No 46
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=99.59 E-value=1.1e-14 Score=139.29 Aligned_cols=110 Identities=13% Similarity=0.167 Sum_probs=95.7
Q ss_pred hhhhcCCCCCCCCHHHHHHHhhccee-EEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 152 DPILLVEEFGNLDGSSLEKLCDVVKP-AVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 152 dlLr~vplF~~L~e~~L~~I~~~l~~-~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
+.++++|+|+.|++++++.+++.++. +.|++|++|+++||+++.+|||++|.|+++..+ + . .+ ..+++||
T Consensus 337 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~~-----~--~-~~-~~l~~G~ 407 (469)
T 1o7f_A 337 DELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----K--G-VV-CTLHEGD 407 (469)
T ss_dssp HHHTTCGGGTTSCHHHHHHHHHHCEEEEECSTTCEEECTTSCCCEEEEEEESEEEEEETT-----T--E-EE-EEEETTC
T ss_pred HHHhcCHhhhhCCHHHHHHHHHHhheeeEecCCCEEEeCCCcCCeEEEEEEeEEEEEEcC-----C--e-eE-EEecCCC
Confidence 34899999999999999999999985 599999999999999999999999999998744 2 1 23 7899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcc-cEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALT-KVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Alt-dvell~L~~edL~~l~~~f 279 (281)
+|||..+ +. + .++++||+|++ +|+++.|++++|.+++.++
T Consensus 408 ~fGe~~l---l~-----~-~~~~~tv~a~~~~~~~~~i~~~~f~~ll~~~ 448 (469)
T 1o7f_A 408 DFGKLAL---VN-----D-APRAASIVLREDNCHFLRVDKEDFNRILRDV 448 (469)
T ss_dssp EECGGGG---TC-----C-SCCSSEEEESSSSEEEEEEEHHHHHHHHHHT
T ss_pred EEEEehh---hc-----C-CCceEEEEEecCCEEEEEEcHHHHHHHHHHC
Confidence 9999865 22 2 24789999999 7999999999999999876
No 47
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=99.55 E-value=3.1e-14 Score=124.58 Aligned_cols=105 Identities=17% Similarity=0.242 Sum_probs=86.2
Q ss_pred CCCCHHHHHHHhh--cceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHH
Q 023527 161 GNLDGSSLEKLCD--VVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIA 238 (281)
Q Consensus 161 ~~L~e~~L~~I~~--~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~ 238 (281)
+++++++++.+.. .++.+.|+||++|+++||+++++|||++|.|+++..+ .+|++.++ ..+ |||+|||..+
T Consensus 2 ~~l~~~~l~~ll~~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~----~~G~e~~~-~~~-~G~~~Ge~~~- 74 (238)
T 2bgc_A 2 SNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSIS----ENGTIMNL-QYY-KGAFVIMSGF- 74 (238)
T ss_dssp --CHHHHHHHHHHHTTCCCEEEETTCEEECTTCCCCEEEEEEESEEEEEEEC----TTSCEEEE-EEE-ESSEEEESBC-
T ss_pred CCCCHHHHHHHHHhCCceEEEECCCCEEEeCCCCCceEEEEEecEEEEEEEC----CCCCEEEE-EEc-CCCEecchhh-
Confidence 4789999999885 5999999999999999999999999999999999876 37787665 677 9999999854
Q ss_pred HhhcCCCCCCCCC-cceEEEEc-ccEEEEEEcHHHHHHHHhhh
Q 023527 239 WAKAGHNSSNLPI-STKTIQAL-TKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 239 w~l~~~s~~~~p~-s~~TV~Al-tdvell~L~~edL~~l~~~f 279 (281)
+. +.++ +..++.|+ ++|+++.|++++|.+++.++
T Consensus 75 --~~-----~~~~~~~~~~~a~~~~~~v~~i~~~~~~~l~~~~ 110 (238)
T 2bgc_A 75 --ID-----TETSVGYYNLEVISEQATAYVIKINELKELLSKN 110 (238)
T ss_dssp --TT-----TCCBSCCCEEEECSSEEEEEEEEHHHHHHHHHHC
T ss_pred --hc-----CCCcCcceeEEEEEcceEEEEEeHHHHHHHHHHC
Confidence 21 2222 35677888 59999999999999998764
No 48
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=99.53 E-value=6.7e-14 Score=123.00 Aligned_cols=102 Identities=14% Similarity=0.102 Sum_probs=87.5
Q ss_pred HHHHHHHhhcce---eEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhh
Q 023527 165 GSSLEKLCDVVK---PAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAK 241 (281)
Q Consensus 165 e~~L~~I~~~l~---~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l 241 (281)
+++++.|.+... .+.|+||++|+++||+.+.+|||++|.|+++..+ .+|++..+ ..++|||+|||..+ +
T Consensus 30 ~~~l~~L~~~~~~~~~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~----~~G~~~~l-~~~~~g~~~G~~~~---~ 101 (243)
T 3la7_A 30 ANVFRQMATGAFPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVY----EAGEEITV-ALLRENSVFGVLSL---L 101 (243)
T ss_dssp HHHHHHHCCSSCCCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEEC----TTCCEEEE-EEECTTCEESCHHH---H
T ss_pred HHHHHHHhhccchheeEEECCCCEEEcCCCCCceEEEEEeCEEEEEEEC----CCCCEEEE-EEecCCCEEcchHH---h
Confidence 788899998888 9999999999999999999999999999999876 36777666 88999999999754 2
Q ss_pred cCCCCCCCC-CcceEEEEcccEEEEEEcHHHHHHHHhhh
Q 023527 242 AGHNSSNLP-ISTKTIQALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 242 ~~~s~~~~p-~s~~TV~Altdvell~L~~edL~~l~~~f 279 (281)
. +.| .+..+++|+++|+++.|++++|.++++++
T Consensus 102 ~-----~~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~ 135 (243)
T 3la7_A 102 T-----GNKSDRFYHAVAFTPVELLSAPIEQVEQALKEN 135 (243)
T ss_dssp S-----SCCSBCCEEEEESSSEEEEEEEHHHHHHHHTTC
T ss_pred C-----CCCCcceEEEEEccceEEEEEcHHHHHHHHHHC
Confidence 2 112 24479999999999999999999998764
No 49
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=99.49 E-value=1.1e-13 Score=141.15 Aligned_cols=110 Identities=14% Similarity=0.198 Sum_probs=95.8
Q ss_pred hhhhcCCCCCCCCHHHHHHHhhcce-eEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCc
Q 023527 152 DPILLVEEFGNLDGSSLEKLCDVVK-PAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGD 230 (281)
Q Consensus 152 dlLr~vplF~~L~e~~L~~I~~~l~-~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GD 230 (281)
+.|+++|+|++|++++++.|+..++ .+.|+||++|+++||+++++|||++|.|+++..+ + +.+ ..++|||
T Consensus 32 ~~L~~~~lF~~Ls~~~l~~L~~~~~~~~~~~kGe~I~~eGd~~~~lyiIlsG~V~v~~~g-------~-~il-~~l~~Gd 102 (694)
T 3cf6_E 32 DELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-------K-GVV-CTLHEGD 102 (694)
T ss_dssp HHHTTCGGGTTSCHHHHHHHHTTCEEEEECSTTCEEECTTSBCCEEEEEEESEEEEEETT-------T-EEE-EEEETTC
T ss_pred HHHHcChhhccCCHHHHHHHHHhcceEEEECCCCEEECCCCcCCeEEEEEEEEEEEEEeC-------C-EEE-EEeCCCC
Confidence 3589999999999999999999998 7899999999999999999999999999998744 3 233 7899999
Q ss_pred eechhhHHHhhcCCCCCCCCCcceEEEEcc-cEEEEEEcHHHHHHHHhhh
Q 023527 231 FSGEELIAWAKAGHNSSNLPISTKTIQALT-KVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 231 ffGE~lL~w~l~~~s~~~~p~s~~TV~Alt-dvell~L~~edL~~l~~~f 279 (281)
+|||..+ +. + .++.++|+|++ +|+++.|++++|++++.++
T Consensus 103 ~fGe~al---~~-----~-~~~~~tv~A~edd~~ll~I~~~~f~~ll~~~ 143 (694)
T 3cf6_E 103 DFGKLAL---VN-----D-APRAASIVLREDNCHFLRVDKEDFNRILRDV 143 (694)
T ss_dssp EECHHHH---HH-----T-CBCSSEEEECSSSEEEEEEEHHHHHHHTTTT
T ss_pred EeehHHH---hC-----C-CCceEEEEEeeCceEEEEEeHHHHHHHHHHC
Confidence 9999755 22 1 24679999999 5999999999999998865
No 50
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=99.47 E-value=1.9e-13 Score=143.44 Aligned_cols=109 Identities=12% Similarity=0.134 Sum_probs=93.7
Q ss_pred hhhcCCCCCCCCHHHHHHHhhcceeEE-ecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCce
Q 023527 153 PILLVEEFGNLDGSSLEKLCDVVKPAV-FTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDF 231 (281)
Q Consensus 153 lLr~vplF~~L~e~~L~~I~~~l~~~~-y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDf 231 (281)
.++++|+|+.|+..++..|+..+.... +++|++|++|||+++.+|||++|.|+++... +|. + ..|++||+
T Consensus 338 ~L~~i~~f~~Ls~~v~r~L~~~l~~~~~~kaGtvI~rQGE~gds~YIIlsG~V~V~~~~-----~~~---v-~~L~~Gd~ 408 (999)
T 4f7z_A 338 ELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGV---V-CTLHEGDD 408 (999)
T ss_dssp HHTTCGGGTTSCHHHHHHHTTTCEEEEESSTTCEEECTTSBCCEEEEEEESEEEEEETT-----TEE---E-EEEETTCE
T ss_pred HHHhhHHHhcCCHHHHHHHHHhhhhheeccCCCEEEeCCCcCCeEEEEEeeEEEEEEcC-----Ccc---e-EEecCCCc
Confidence 389999999999999999999998654 5789999999999999999999999998644 322 3 78999999
Q ss_pred echhhHHHhhcCCCCCCCCCcceEEEEccc-EEEEEEcHHHHHHHHhhh
Q 023527 232 SGEELIAWAKAGHNSSNLPISTKTIQALTK-VEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 232 fGE~lL~w~l~~~s~~~~p~s~~TV~Altd-vell~L~~edL~~l~~~f 279 (281)
|||.++ +. + .++.+||+|.++ |+++.++++||.+++.+-
T Consensus 409 FGElAL---L~-----~-~PR~aTV~a~~d~c~fl~i~k~df~~il~~~ 448 (999)
T 4f7z_A 409 FGKLAL---VN-----D-APRAASIVLREDNCHFLRVDKEDGNRILRDV 448 (999)
T ss_dssp ECGGGG---TC-----S-CBCSSEEEESSSSEEEEEEEHHHHHHHHHHH
T ss_pred ccchhh---cc-----C-CCeeEEEEEecCceEEEEeeHHHHHHHHhHH
Confidence 999876 32 3 347799999885 999999999999998763
No 51
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=99.38 E-value=1.4e-12 Score=110.42 Aligned_cols=81 Identities=16% Similarity=0.119 Sum_probs=69.7
Q ss_pred EEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEE
Q 023527 178 AVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQ 257 (281)
Q Consensus 178 ~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~ 257 (281)
+.|+||++|+++||+.+++|||++|.|+++..+ .+|++..+ ..++|||+||| .+ +. + .++.++++
T Consensus 2 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~----~~g~~~~~-~~~~~G~~~Ge-~~---~~-----~-~~~~~~~~ 66 (195)
T 3b02_A 2 KRFARKETIYLRGEEARTLYRLEEGLVRVVELL----PDGRLITL-RHVLPGDYFGE-EA---LE-----G-KAYRYTAE 66 (195)
T ss_dssp EEECTTCEEECTTSBCCCEEEEEESCEEEEEEC----TTSCEEEE-EEECTTCEECG-GG---GT-----C-SBCSSEEE
T ss_pred eEcCCCCEEECCCCCCCeEEEEEeCEEEEEEEC----CCCCEEEE-EEecCCCEech-hh---hC-----C-CCceeEEE
Confidence 579999999999999999999999999999876 36776655 88999999999 65 22 2 24678999
Q ss_pred EcccEEEEEEcHHHHH
Q 023527 258 ALTKVEAFVLMAYDLK 273 (281)
Q Consensus 258 Altdvell~L~~edL~ 273 (281)
|+++|+++.|++++|+
T Consensus 67 A~~~~~v~~i~~~~~~ 82 (195)
T 3b02_A 67 AMTEAVVQGLEPRAMD 82 (195)
T ss_dssp ESSSEEEEEECGGGCC
T ss_pred ECCcEEEEEEcHHHcC
Confidence 9999999999999884
No 52
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=99.31 E-value=2.5e-12 Score=109.36 Aligned_cols=87 Identities=23% Similarity=0.213 Sum_probs=69.7
Q ss_pred HhhcceeEEecCCCeEEccCCCc--CeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCC
Q 023527 171 LCDVVKPAVFTERSYIIQEENPI--DQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSN 248 (281)
Q Consensus 171 I~~~l~~~~y~kGe~I~rEGDp~--~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~ 248 (281)
|...++.+.|+||++|+++||+. +++|||++|.|+++..+ .+|++..+ ..++|||+|||..+ ..
T Consensus 1 l~~~~~~~~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~~~~----~~G~~~~~-~~~~~g~~~G~~~l----~~----- 66 (202)
T 2zcw_A 1 MTQVRETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVD----EEGNALTL-RLVRPGGFFGEEAL----FG----- 66 (202)
T ss_dssp -----CCEEECTTCEEECSBSCCTTCCCEEEEESCEEEEEEC----TTSCEEEE-EEECTTCEECTHHH----HT-----
T ss_pred CCccceEEEECCCCEEECCCCCCCCCeEEEEEeCEEEEEEEC----CCCcEEEE-EEecCCCEeeehhc----CC-----
Confidence 35677889999999999999999 99999999999999876 36777665 88999999999433 21
Q ss_pred CCCcceEEEEcccEEEEEEcHHHHH
Q 023527 249 LPISTKTIQALTKVEAFVLMAYDLK 273 (281)
Q Consensus 249 ~p~s~~TV~Altdvell~L~~edL~ 273 (281)
.++..+++|+++|+++.+ +++|+
T Consensus 67 -~~~~~~~~A~~~~~v~~i-~~~~~ 89 (202)
T 2zcw_A 67 -QERIYFAEAATDVRLEPL-PENPD 89 (202)
T ss_dssp -CCBCSEEEESSCEEEEEC-CSSCC
T ss_pred -CCcceEEEEcccEEEEEE-hHhcC
Confidence 246789999999999999 87663
No 53
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=91.32 E-value=1.4 Score=37.98 Aligned_cols=69 Identities=13% Similarity=0.184 Sum_probs=53.6
Q ss_pred cceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcc
Q 023527 174 VVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPIST 253 (281)
Q Consensus 174 ~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~ 253 (281)
.+....+.+|+.+=..--|.+.+++|++|++++...+ ++ ..+++||++=-. +...
T Consensus 38 ~~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i~~-------~~----~~l~~Gd~~~~p--------------~~~~ 92 (227)
T 3rns_A 38 YISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFIEN-------NK----KTISNGDFLEIT--------------ANHN 92 (227)
T ss_dssp EEEEEEECTTCEEEECSCSSCEEEEEEESEEEEEESS-------CE----EEEETTEEEEEC--------------SSCC
T ss_pred EEEEEEECCCCccCccccCCCEEEEEEeCEEEEEECC-------EE----EEECCCCEEEEC--------------CCCC
Confidence 4456789999999888889999999999999987633 43 579999986321 1234
Q ss_pred eEEEEcccEEEEEE
Q 023527 254 KTIQALTKVEAFVL 267 (281)
Q Consensus 254 ~TV~Altdvell~L 267 (281)
..++|.+++..+.+
T Consensus 93 H~~~a~~~~~~l~i 106 (227)
T 3rns_A 93 YSIEARDNLKLIEI 106 (227)
T ss_dssp EEEEESSSEEEEEE
T ss_pred EEEEECCCcEEEEE
Confidence 67889999999876
No 54
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=90.80 E-value=1.8 Score=33.00 Aligned_cols=68 Identities=15% Similarity=0.113 Sum_probs=48.6
Q ss_pred ceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcce
Q 023527 175 VKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTK 254 (281)
Q Consensus 175 l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~ 254 (281)
+....+++|+.+-..-.+.+++++|++|++++...+ ++ ..+++||.+=-. +....
T Consensus 38 v~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~~-------~~----~~l~~Gd~i~ip--------------~~~~H 92 (114)
T 3fjs_A 38 VMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVDG-------AQ----RRLHQGDLLYLG--------------AGAAH 92 (114)
T ss_dssp EEEEEECTTCEEEEECCSSCEEEEEEESCEEEEETT-------EE----EEECTTEEEEEC--------------TTCCE
T ss_pred EEEEEECCCCccCceeCCCcEEEEEEECEEEEEECC-------EE----EEECCCCEEEEC--------------CCCcE
Confidence 445678999988777777889999999999986533 43 579999987421 11234
Q ss_pred EEEEcccEEEEEE
Q 023527 255 TIQALTKVEAFVL 267 (281)
Q Consensus 255 TV~Altdvell~L 267 (281)
.+++.++++++.+
T Consensus 93 ~~~~~~~~~~~~~ 105 (114)
T 3fjs_A 93 DVNAITNTSLLVT 105 (114)
T ss_dssp EEEESSSEEEEEE
T ss_pred EEEeCCCcEEEEE
Confidence 6778888776543
No 55
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=87.59 E-value=3 Score=31.14 Aligned_cols=46 Identities=20% Similarity=0.143 Sum_probs=33.8
Q ss_pred eEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 177 PAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 177 ~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
...+.+|+.+-....+.+++++|++|++++.. +|++ ..+++||++=
T Consensus 42 ~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i-------~~~~----~~l~~Gd~i~ 87 (114)
T 2ozj_A 42 LFSFADGESVSEEEYFGDTLYLILQGEAVITF-------DDQK----IDLVPEDVLM 87 (114)
T ss_dssp EEEEETTSSCCCBCCSSCEEEEEEEEEEEEEE-------TTEE----EEECTTCEEE
T ss_pred EEEECCCCccccEECCCCeEEEEEeCEEEEEE-------CCEE----EEecCCCEEE
Confidence 34467787665556678899999999999765 3342 5799999863
No 56
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=86.75 E-value=5.3 Score=29.60 Aligned_cols=68 Identities=12% Similarity=0.114 Sum_probs=45.2
Q ss_pred ceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcce
Q 023527 175 VKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTK 254 (281)
Q Consensus 175 l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~ 254 (281)
+....+.+|..+-..-.+..++++|++|++++.. +|++ ..+++||++=-. |....
T Consensus 42 ~~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~-------~~~~----~~l~~Gd~~~ip--------------~~~~H 96 (115)
T 1yhf_A 42 ITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITI-------DQET----YRVAEGQTIVMP--------------AGIPH 96 (115)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEESEEEEEE-------TTEE----EEEETTCEEEEC--------------TTSCE
T ss_pred EEEEEECCCCccCCEECCCcEEEEEEeCEEEEEE-------CCEE----EEECCCCEEEEC--------------CCCCE
Confidence 3445678888765544557899999999999764 2232 569999997421 11234
Q ss_pred EEEEcccEEEEEE
Q 023527 255 TIQALTKVEAFVL 267 (281)
Q Consensus 255 TV~Altdvell~L 267 (281)
.+++.++++.+.+
T Consensus 97 ~~~~~~~~~~~~v 109 (115)
T 1yhf_A 97 ALYAVEAFQMLLV 109 (115)
T ss_dssp EEEESSCEEEEEE
T ss_pred EEEECCCceEEEE
Confidence 5667777776654
No 57
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=84.21 E-value=2 Score=33.39 Aligned_cols=45 Identities=16% Similarity=0.263 Sum_probs=33.9
Q ss_pred eEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 177 PAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 177 ~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
...+.+|+.+-.. .+.+++++|++|++++.. + |++ ..+++||.+-
T Consensus 44 ~~~~~pG~~~~~H-~~~~E~~~Vl~G~~~~~~-~------g~~----~~l~~GD~v~ 88 (119)
T 3lwc_A 44 YGRYAPGQSLTET-MAVDDVMIVLEGRLSVST-D------GET----VTAGPGEIVY 88 (119)
T ss_dssp EEEECTTCEEEEE-CSSEEEEEEEEEEEEEEE-T------TEE----EEECTTCEEE
T ss_pred EEEECCCCCcCcc-CCCCEEEEEEeCEEEEEE-C------CEE----EEECCCCEEE
Confidence 3567888766544 488999999999999865 3 343 5799999974
No 58
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=84.18 E-value=5.9 Score=29.36 Aligned_cols=68 Identities=13% Similarity=0.014 Sum_probs=45.4
Q ss_pred ceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcce
Q 023527 175 VKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTK 254 (281)
Q Consensus 175 l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~ 254 (281)
+....+.+|..+-.--.+..++++|++|++++.. + |++ ..+++||.+=-. +....
T Consensus 36 ~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~-~------~~~----~~l~~Gd~~~ip--------------~~~~H 90 (116)
T 2pfw_A 36 AVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNV-D------GVI----KVLTAGDSFFVP--------------PHVDH 90 (116)
T ss_dssp EEEEEECTTEEEEEECCSSEEEEEEEEECEEEEE-T------TEE----EEECTTCEEEEC--------------TTCCE
T ss_pred EEEEEECCCCcCCcEECCcceEEEEEeeEEEEEE-C------CEE----EEeCCCCEEEEC--------------cCCce
Confidence 3446678888764444457899999999999765 2 232 579999996321 11234
Q ss_pred EEEEcccEEEEEE
Q 023527 255 TIQALTKVEAFVL 267 (281)
Q Consensus 255 TV~Altdvell~L 267 (281)
.+++.++++++.+
T Consensus 91 ~~~~~~~~~~l~v 103 (116)
T 2pfw_A 91 GAVCPTGGILIDT 103 (116)
T ss_dssp EEEESSCEEEEEE
T ss_pred eeEeCCCcEEEEE
Confidence 5667777777766
No 59
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=81.64 E-value=7.5 Score=29.29 Aligned_cols=49 Identities=16% Similarity=0.138 Sum_probs=36.9
Q ss_pred cceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 174 VVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 174 ~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
.+....+.+|..+-..-.+..++++|++|++++...+ ++ ..+++||++=
T Consensus 42 ~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~-------~~----~~l~~Gd~~~ 90 (126)
T 4e2g_A 42 MLNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTIGE-------ET----RVLRPGMAYT 90 (126)
T ss_dssp EEEEEEECTTCEEEEECCSSEEEEEEEEECEEEEETT-------EE----EEECTTEEEE
T ss_pred EEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEECC-------EE----EEeCCCCEEE
Confidence 3455678888887666666789999999999986532 32 5699999863
No 60
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=81.45 E-value=2.9 Score=31.67 Aligned_cols=46 Identities=15% Similarity=0.146 Sum_probs=34.2
Q ss_pred eeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 176 KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
-...+++|+.-.. .+.+++++|++|++++... +|++ ..+++||.+=
T Consensus 34 ~~~~~~pg~~~~h--H~~~E~~~Vl~G~~~~~i~------~g~~----~~l~~GD~i~ 79 (101)
T 1o5u_A 34 PIWEKEVSEFDWY--YDTNETCYILEGKVEVTTE------DGKK----YVIEKGDLVT 79 (101)
T ss_dssp CEEEECSEEEEEE--CSSCEEEEEEEEEEEEEET------TCCE----EEEETTCEEE
T ss_pred EEEEeCCCccccc--CCceEEEEEEeCEEEEEEC------CCCE----EEECCCCEEE
Confidence 3567788876544 5678999999999998763 2443 5799999974
No 61
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=80.97 E-value=3.8 Score=29.97 Aligned_cols=48 Identities=19% Similarity=0.203 Sum_probs=34.6
Q ss_pred ceeEEecCCCeEEcc--CCC-cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 175 VKPAVFTERSYIIQE--ENP-IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 175 l~~~~y~kGe~I~rE--GDp-~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+....+.+|..+-.. -.+ ..++++|++|++++...+ ++ ..+++||++=
T Consensus 23 ~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~-------~~----~~l~~Gd~~~ 73 (113)
T 2gu9_A 23 AAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDG-------HT----QALQAGSLIA 73 (113)
T ss_dssp EEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETT-------EE----EEECTTEEEE
T ss_pred EEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEECC-------EE----EEeCCCCEEE
Confidence 344578888876544 345 789999999999976532 32 5699999873
No 62
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=80.16 E-value=4.5 Score=28.88 Aligned_cols=46 Identities=11% Similarity=0.099 Sum_probs=32.6
Q ss_pred eeEEecCCCeEEccCCC-cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 176 KPAVFTERSYIIQEENP-IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp-~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
....+.+|..+-..-.+ .+++++|++|++++... |++ ..+++||++
T Consensus 31 ~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~-------~~~----~~l~~Gd~~ 77 (105)
T 1v70_A 31 DLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVG-------EEE----ALLAPGMAA 77 (105)
T ss_dssp EEEEECTTCEEEEECCSSCEEEEEEEESCEEEEET-------TEE----EEECTTCEE
T ss_pred EEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEEC-------CEE----EEeCCCCEE
Confidence 44567888877544434 46799999999997652 232 569999987
No 63
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=78.78 E-value=3.3 Score=31.41 Aligned_cols=49 Identities=18% Similarity=0.125 Sum_probs=34.3
Q ss_pred ceeEEecCCCeEEccCCCc-CeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 175 VKPAVFTERSYIIQEENPI-DQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 175 l~~~~y~kGe~I~rEGDp~-~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+....+.+|..+-..-.+. .++++|++|+++.... +|++ ..+++||++=
T Consensus 41 ~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~------~~~~----~~l~~Gd~~~ 90 (125)
T 3h8u_A 41 VVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQG------NGIV----THLKAGDIAI 90 (125)
T ss_dssp EEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECS------TTCE----EEEETTEEEE
T ss_pred EEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEEC------CCeE----EEeCCCCEEE
Confidence 4456788888776555554 7888999999997542 3343 5799999863
No 64
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=76.54 E-value=11 Score=32.12 Aligned_cols=68 Identities=13% Similarity=0.169 Sum_probs=48.3
Q ss_pred ceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcce
Q 023527 175 VKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTK 254 (281)
Q Consensus 175 l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~ 254 (281)
+....+++|+.+-..-.+.+++++|++|++++.. +|++ ..+++||++=-. +....
T Consensus 155 ~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i-------~g~~----~~l~~Gd~i~ip--------------~~~~H 209 (227)
T 3rns_A 155 MTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYV-------DGKP----FIVKKGESAVLP--------------ANIPH 209 (227)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEE-------TTEE----EEEETTEEEEEC--------------TTSCE
T ss_pred EEEEEECCCCccCCEECCCcEEEEEEeEEEEEEE-------CCEE----EEECCCCEEEEC--------------CCCcE
Confidence 3457789999987666778899999999999865 3343 579999996321 11234
Q ss_pred EEEE-cccEEEEEE
Q 023527 255 TIQA-LTKVEAFVL 267 (281)
Q Consensus 255 TV~A-ltdvell~L 267 (281)
.+++ .++++++.+
T Consensus 210 ~~~~~~~~~~~ll~ 223 (227)
T 3rns_A 210 AVEAETENFKMLLI 223 (227)
T ss_dssp EEECCSSCEEEEEE
T ss_pred EEEeCCCCEEEEEE
Confidence 5677 888877654
No 65
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=75.16 E-value=3.9 Score=34.66 Aligned_cols=35 Identities=17% Similarity=0.369 Sum_probs=27.7
Q ss_pred CcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 192 PIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 192 p~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+.++++++++|.+.+...+ +|+... ..+++||+|=
T Consensus 54 ~~dE~FyvlkG~m~i~v~d-----~g~~~~--v~l~eGE~f~ 88 (174)
T 1yfu_A 54 PLEEFFYQLRGNAYLNLWV-----DGRRER--ADLKEGDIFL 88 (174)
T ss_dssp SSCEEEEEEESCEEEEEEE-----TTEEEE--EEECTTCEEE
T ss_pred CCceEEEEEeeEEEEEEEc-----CCceee--EEECCCCEEE
Confidence 5789999999999988777 553222 6799999983
No 66
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=74.46 E-value=6.2 Score=32.27 Aligned_cols=48 Identities=13% Similarity=0.078 Sum_probs=34.9
Q ss_pred ceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 175 VKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 175 l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+....+.+|..+-..-.+..++++|++|++++.. +|++ ..+++||++=
T Consensus 58 ~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i-------~~~~----~~l~~Gd~i~ 105 (167)
T 3ibm_A 58 TRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVL-------DDRV----EPLTPLDCVY 105 (167)
T ss_dssp EEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEE-------TTEE----EEECTTCEEE
T ss_pred EEEEEECCCCCCCCccCCCcEEEEEEeCEEEEEE-------CCEE----EEECCCCEEE
Confidence 3445677887665555578999999999999765 3342 5799999873
No 67
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=74.24 E-value=1.9 Score=33.98 Aligned_cols=45 Identities=11% Similarity=0.076 Sum_probs=31.7
Q ss_pred EEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 178 AVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 178 ~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
...++|..-.+..+ .+++++|++|++++... +|+. ..+++||.+-
T Consensus 54 w~~~pG~~~~~~~~-~~E~~~Vl~G~~~l~~~------~g~~----~~l~~GD~~~ 98 (123)
T 3bcw_A 54 WESTSGSFQSNTTG-YIEYCHIIEGEARLVDP------DGTV----HAVKAGDAFI 98 (123)
T ss_dssp EEEEEEEEECCCTT-EEEEEEEEEEEEEEECT------TCCE----EEEETTCEEE
T ss_pred EEECCCceeeEcCC-CcEEEEEEEEEEEEEEC------CCeE----EEECCCCEEE
Confidence 45666766654332 38999999999998652 3343 5799999975
No 68
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=74.20 E-value=6.5 Score=29.36 Aligned_cols=46 Identities=9% Similarity=0.107 Sum_probs=31.5
Q ss_pred eEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeee-eecCCceec
Q 023527 177 PAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNN-HLEGGDFSG 233 (281)
Q Consensus 177 ~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~-~L~~GDffG 233 (281)
...+.+|..+-.--.+..++++|++|++++...+ ++ . .+++||++=
T Consensus 31 ~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~-------~~----~~~l~~Gd~i~ 77 (117)
T 2b8m_A 31 HIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTLED-------QE----PHNYKEGNIVY 77 (117)
T ss_dssp EEEEETTCBCCCEECSSCEEEEEEESEEEEEETT-------SC----CEEEETTCEEE
T ss_pred EEEECCCCcCCCEeCCCcEEEEEEeCEEEEEECC-------EE----EEEeCCCCEEE
Confidence 3456677665333345778999999999976532 32 4 699999863
No 69
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=73.65 E-value=20 Score=25.84 Aligned_cols=68 Identities=13% Similarity=0.115 Sum_probs=41.7
Q ss_pred eeEEecCCCeEEccCCCc-CeE-EEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcc
Q 023527 176 KPAVFTERSYIIQEENPI-DQM-LFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPIST 253 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp~-~~m-yfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~ 253 (281)
....+.+|..+-..-.+. .++ ++|++|++++...+ |++ ..+++||++=-. +...
T Consensus 36 ~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~------~~~----~~l~~Gd~~~ip--------------~~~~ 91 (110)
T 2q30_A 36 VSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDG------DAV----IPAPRGAVLVAP--------------ISTP 91 (110)
T ss_dssp EEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGG------GCE----EEECTTEEEEEE--------------TTSC
T ss_pred EEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCC------CEE----EEECCCCEEEeC--------------CCCc
Confidence 335678888765443343 466 89999999876531 343 569999986322 1122
Q ss_pred eEEEEcccEEEEEE
Q 023527 254 KTIQALTKVEAFVL 267 (281)
Q Consensus 254 ~TV~Altdvell~L 267 (281)
..+++.++++++.+
T Consensus 92 H~~~~~~~~~~l~~ 105 (110)
T 2q30_A 92 HGVRAVTDMKVLVT 105 (110)
T ss_dssp EEEEESSSEEEEEE
T ss_pred EEEEEcCCcEEEEE
Confidence 45666777665543
No 70
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=72.72 E-value=5.7 Score=32.86 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=36.8
Q ss_pred ceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 175 VKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 175 l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+....+++|......-..++++++|++|++++...+ .+|.. . ..+++||++=
T Consensus 43 ~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~----~~~~~--~-~~l~~GDv~~ 94 (178)
T 1dgw_A 43 VLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVN----PDGRD--T-YKLDQGDAIK 94 (178)
T ss_dssp EEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEE----TTEEE--E-EEEETTEEEE
T ss_pred EEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEe----CCCcE--E-EEECCCCEEE
Confidence 455678888876555344789999999999987664 13222 1 5799999874
No 71
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=72.56 E-value=4.5 Score=31.87 Aligned_cols=45 Identities=9% Similarity=0.183 Sum_probs=32.1
Q ss_pred EEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 178 AVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 178 ~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
-..++|..-... +..++++.|++|++++... +|.. ..+++||.+-
T Consensus 47 We~tPG~~~~~~-~~~~E~~~iLeG~~~lt~d------dG~~----~~l~aGD~~~ 91 (116)
T 3es4_A 47 WMAEPGIYNYAG-RDLEETFVVVEGEALYSQA------DADP----VKIGPGSIVS 91 (116)
T ss_dssp EEECSEEEEECC-CSEEEEEEEEECCEEEEET------TCCC----EEECTTEEEE
T ss_pred EecCCceeECee-CCCcEEEEEEEeEEEEEeC------CCeE----EEECCCCEEE
Confidence 456667665554 3446999999999998654 4442 5799999985
No 72
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=71.81 E-value=4.4 Score=34.43 Aligned_cols=60 Identities=13% Similarity=0.175 Sum_probs=38.2
Q ss_pred HHHHHhhccee----EEecCCCeEEc-c----------CCCcCeEEEEEEcEEEEEEeccccccCC----Ccceeeeeec
Q 023527 167 SLEKLCDVVKP----AVFTERSYIIQ-E----------ENPIDQMLFVLQGKLWTYTSRRVTELSS----NSGNLNNHLE 227 (281)
Q Consensus 167 ~L~~I~~~l~~----~~y~kGe~I~r-E----------GDp~~~myfIl~G~V~v~~~~~~~~~gG----r~~~~~~~L~ 227 (281)
-++...+.+++ +....+++++. - -++.++++++++|.+.+...+ +| +-.. ..++
T Consensus 13 wl~e~~~~~~PPV~Nk~v~~~~~~V~~vgGPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d-----~g~~~~~~~d--v~i~ 85 (176)
T 1zvf_A 13 WLKENEGLLKPPVNNYCLHKGGFTVMIVGGPNERTDYHINPTPEWFYQKKGSMLLKVVD-----ETDAEPKFID--IIIN 85 (176)
T ss_dssp HHHHHGGGGSSSSCEEEEECSSEEEEEECSSBCCSCEEECSSCEEEEEEESCEEEEEEE-----CSSSSCEEEE--EEEC
T ss_pred HHHHhHhhcCCCcCCEEEecCCEEEEEEcCCCcCCcCcCCCCceEEEEEeCEEEEEEEc-----CCCcccceee--EEEC
Confidence 44555556666 43333554432 2 345679999999999988777 55 1111 6799
Q ss_pred CCceec
Q 023527 228 GGDFSG 233 (281)
Q Consensus 228 ~GDffG 233 (281)
+||+|=
T Consensus 86 eGdmfl 91 (176)
T 1zvf_A 86 EGDSYL 91 (176)
T ss_dssp TTEEEE
T ss_pred CCCEEE
Confidence 999983
No 73
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=71.55 E-value=6.9 Score=34.01 Aligned_cols=50 Identities=18% Similarity=0.167 Sum_probs=38.0
Q ss_pred hcceeEEecCCCeEEc-cCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 173 DVVKPAVFTERSYIIQ-EENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 173 ~~l~~~~y~kGe~I~r-EGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
-.+....+++|..+=. +-...++.++|++|++.... +|++ ..+++||++-
T Consensus 165 ~~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~-------~~~~----~~l~~GD~~~ 215 (246)
T 1sfn_A 165 FMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKL-------EENY----YPVTAGDIIW 215 (246)
T ss_dssp EEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEE-------TTEE----EEEETTCEEE
T ss_pred eEEEEEEECCCCccCcccCCCceEEEEEEECEEEEEE-------CCEE----EEcCCCCEEE
Confidence 3456678999988764 55667899999999998764 4343 5799999974
No 74
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=71.26 E-value=4 Score=34.28 Aligned_cols=49 Identities=10% Similarity=0.037 Sum_probs=35.0
Q ss_pred cceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 174 VVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 174 ~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
.+....+.+|...-.--.+..++++|++|++++...+ |++ ..|++||.+
T Consensus 80 ~~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~ld~------ge~----~~L~~GDsi 128 (172)
T 3es1_A 80 VIRVVDMLPGKESPMHRTNSIDYGIVLEGEIELELDD------GAK----RTVRQGGII 128 (172)
T ss_dssp EEEEEEECTTCBCCCBCCSEEEEEEEEESCEEEECGG------GCE----EEECTTCEE
T ss_pred EEEEEEECCCCCCCCeecCceEEEEEEeCEEEEEECC------CeE----EEECCCCEE
Confidence 4455678888754444445667899999999986532 343 579999998
No 75
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=71.14 E-value=12 Score=31.25 Aligned_cols=52 Identities=13% Similarity=0.091 Sum_probs=36.2
Q ss_pred ceeEEecCCCeEEccCCC-cCeEEEEEEcEEEEEEeccccccC----CCcceeeeeecCCceec
Q 023527 175 VKPAVFTERSYIIQEENP-IDQMLFVLQGKLWTYTSRRVTELS----SNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 175 l~~~~y~kGe~I~rEGDp-~~~myfIl~G~V~v~~~~~~~~~g----Gr~~~~~~~L~~GDffG 233 (281)
+....+.+|..+-.--.+ .+++++|++|++++...+ + ++ .+. ..+++||++=
T Consensus 74 ~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~-----~~~~~~~-~~~-~~l~~GD~~~ 130 (201)
T 1fi2_A 74 MNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILG-----SLDSGNK-LYS-RVVRAGETFV 130 (201)
T ss_dssp EEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEEC-----CGGGTTC-EEE-EEEETTCEEE
T ss_pred EEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEc-----CCCCCCe-EEE-EEECCCCEEE
Confidence 344678888866544445 689999999999987754 2 33 111 5799999874
No 76
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=70.92 E-value=4.2 Score=30.03 Aligned_cols=69 Identities=12% Similarity=0.115 Sum_probs=40.2
Q ss_pred ecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEEEc
Q 023527 180 FTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQAL 259 (281)
Q Consensus 180 y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~Al 259 (281)
..+|+...+.-+..+++++|++|++++.. + +|+. ..+++||++=-. + + .....++.
T Consensus 35 ~~~g~~~~H~H~~~~E~~~Vl~G~~~~~~-~-----~~~~----~~l~~Gd~~~ip--------~---~---~~H~~~~~ 90 (107)
T 2i45_A 35 KLLGDYGWHTHGYSDKVLFAVEGDMAVDF-A-----DGGS----MTIREGEMAVVP--------K---S---VSHRPRSE 90 (107)
T ss_dssp EEEEECCCBCC--CCEEEEESSSCEEEEE-T-----TSCE----EEECTTEEEEEC--------T---T---CCEEEEEE
T ss_pred ECCCCCcceeCCCCCEEEEEEeCEEEEEE-C-----CCcE----EEECCCCEEEEC--------C---C---CcEeeEeC
Confidence 34555443333334899999999999765 2 3132 579999997321 1 1 12334445
Q ss_pred ccEEEEEEcHHHH
Q 023527 260 TKVEAFVLMAYDL 272 (281)
Q Consensus 260 tdvell~L~~edL 272 (281)
++++++.++....
T Consensus 91 ~~~~~l~i~~~~~ 103 (107)
T 2i45_A 91 NGCSLVLIELSDP 103 (107)
T ss_dssp EEEEEEEEECC--
T ss_pred CCeEEEEEECCCc
Confidence 6788887776544
No 77
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=70.79 E-value=8.5 Score=29.82 Aligned_cols=46 Identities=11% Similarity=0.117 Sum_probs=32.7
Q ss_pred eeEEecCCCeEEccCCC-cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 176 KPAVFTERSYIIQEENP-IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp-~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
....+.+|..+-.--.+ ..++++|++|++++.. +|++ ..+++||.+
T Consensus 60 ~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i-------~~~~----~~l~~Gd~i 106 (133)
T 1o4t_A 60 ARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD-------NGKD----VPIKAGDVC 106 (133)
T ss_dssp EEEEECTTCEEEEEECCSEEEEEEEEESEEEEEE-------TTEE----EEEETTEEE
T ss_pred EEEEECCCCccCceECCCccEEEEEEeCEEEEEE-------CCEE----EEeCCCcEE
Confidence 34578888766433333 4789999999999765 3343 579999987
No 78
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=70.56 E-value=6.8 Score=32.19 Aligned_cols=50 Identities=16% Similarity=0.081 Sum_probs=33.2
Q ss_pred eEEecCCCeEE---ccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 177 PAVFTERSYII---QEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 177 ~~~y~kGe~I~---rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
...+.+|...- .--.+.+++++|++|++++...+ +|.... ..+++||++=
T Consensus 121 ~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~~~-----~~~~~~--~~l~~GD~~~ 173 (198)
T 2bnm_A 121 VVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGD-----KENPKE--ALLPTGASMF 173 (198)
T ss_dssp EEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESC-----TTSCEE--EEECTTCEEE
T ss_pred EEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEECC-----cCCccc--EEECCCCEEE
Confidence 34677877654 23345579999999999987633 222111 5799999974
No 79
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=70.41 E-value=5.1 Score=31.78 Aligned_cols=44 Identities=16% Similarity=0.150 Sum_probs=31.0
Q ss_pred eEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 177 PAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 177 ~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
...+.+|+.-. -.+.+++++|++|++++.. +|++ ..+++||.+-
T Consensus 61 ~~~~~pG~~~~--h~~~~E~~~VLeG~~~l~~-------~g~~----~~l~~GD~i~ 104 (133)
T 2pyt_A 61 FMQWDNAFFPW--TLNYDEIDMVLEGELHVRH-------EGET----MIAKAGDVMF 104 (133)
T ss_dssp EEEEEEEEEEE--ECSSEEEEEEEEEEEEEEE-------TTEE----EEEETTCEEE
T ss_pred EEEECCCCccc--cCCCCEEEEEEECEEEEEE-------CCEE----EEECCCcEEE
Confidence 34577774322 2347899999999999765 3343 5799999974
No 80
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=70.19 E-value=2.3 Score=31.15 Aligned_cols=49 Identities=16% Similarity=0.076 Sum_probs=32.6
Q ss_pred eeEEecCCCeEEccCCCcC-eEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 176 KPAVFTERSYIIQEENPID-QMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp~~-~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
....+++|+..-..-.+.+ ++++|++|++++...+ +.+. ..+.+||.+=
T Consensus 21 ~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~-----g~~~----~~l~~Gd~~~ 70 (97)
T 2fqp_A 21 TEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPE-----GSVT----SQLTRGVSYT 70 (97)
T ss_dssp EEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETT-----EEEE----EEECTTCCEE
T ss_pred EEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCC-----CCEE----EEEcCCCEEE
Confidence 4466788876533333444 5999999999976533 2122 5799999874
No 81
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=69.83 E-value=6.1 Score=31.54 Aligned_cols=46 Identities=15% Similarity=0.158 Sum_probs=32.4
Q ss_pred eeEEecCCCe-E-EccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 176 KPAVFTERSY-I-IQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 176 ~~~~y~kGe~-I-~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
....+.+|.. + .+.-...+++++|++|++++.. +|++ ..+++||++
T Consensus 49 ~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~-------~~~~----~~l~~Gd~i 96 (162)
T 3l2h_A 49 HLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM-------ENDQ----YPIAPGDFV 96 (162)
T ss_dssp EEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE-------TTEE----EEECTTCEE
T ss_pred EEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE-------CCEE----EEeCCCCEE
Confidence 3466788873 2 2333367899999999999865 3343 579999997
No 82
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=69.71 E-value=5.3 Score=32.52 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=32.6
Q ss_pred eEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 177 PAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 177 ~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
...+.+|..+-..-.+..++++|++|++++.. +|++ ..+++||++
T Consensus 48 ~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v-------~g~~----~~l~~Gd~i 92 (156)
T 3kgz_A 48 YFEVDEGGYSTLERHAHVHAVMIHRGHGQCLV-------GETI----SDVAQGDLV 92 (156)
T ss_dssp EEEEEEEEECCCBBCSSCEEEEEEEEEEEEEE-------TTEE----EEEETTCEE
T ss_pred EEEECCCCccCceeCCCcEEEEEEeCEEEEEE-------CCEE----EEeCCCCEE
Confidence 34566776655555567899999999999865 3342 579999987
No 83
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=68.48 E-value=6.9 Score=31.76 Aligned_cols=47 Identities=13% Similarity=0.148 Sum_probs=32.5
Q ss_pred eeEEecCCCeE--EccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 176 KPAVFTERSYI--IQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 176 ~~~~y~kGe~I--~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
....+.+|... .+.-+..+++++|++|++++...+ ++ ..+++||++=
T Consensus 46 ~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~-------~~----~~l~~GD~i~ 94 (163)
T 3i7d_A 46 NLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQ-------GE----HPMVPGDCAA 94 (163)
T ss_dssp EEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETT-------EE----EEECTTCEEE
T ss_pred EEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECC-------EE----EEeCCCCEEE
Confidence 34667788754 233333479999999999987533 32 5799999864
No 84
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=67.89 E-value=7.8 Score=29.64 Aligned_cols=47 Identities=21% Similarity=0.311 Sum_probs=32.5
Q ss_pred eeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 176 KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
....+.+|..+-.--.+..++++|++|++++.. +|++ ..+++||++=
T Consensus 51 ~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i-------~~~~----~~l~~Gd~i~ 97 (126)
T 1vj2_A 51 RLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLK-------EQGE----ETVEEGFYIF 97 (126)
T ss_dssp EEEEEEEEEEEEEECCSSCEEEEEEESEEEEEC-------SSCE----EEEETTEEEE
T ss_pred EEEEECCCCcCCceeCCCcEEEEEEEeEEEEEE-------CCEE----EEECCCCEEE
Confidence 334566666554444457899999999998764 3343 5699999873
No 85
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=67.48 E-value=11 Score=30.76 Aligned_cols=45 Identities=11% Similarity=0.209 Sum_probs=31.5
Q ss_pred EEecCCCeEEc--cCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 178 AVFTERSYIIQ--EENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 178 ~~y~kGe~I~r--EGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
..+.+|...-. --.+.+++++|++|++++.. +|++ ..+++||++=
T Consensus 109 ~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~-------~~~~----~~l~~GD~i~ 155 (192)
T 1y9q_A 109 ITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFF-------DEQW----HELQQGEHIR 155 (192)
T ss_dssp EEECTTCEEEECCCSTTCEEEEEEEESCEEEEE-------TTEE----EEECTTCEEE
T ss_pred EEECCCCCccCCCCCCCCEEEEEEEEeEEEEEE-------CCEE----EEeCCCCEEE
Confidence 45677776542 22345799999999999765 3343 5799999873
No 86
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=67.40 E-value=19 Score=25.59 Aligned_cols=52 Identities=13% Similarity=0.177 Sum_probs=34.3
Q ss_pred cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEEEcccEEEEEEcH
Q 023527 193 IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEAFVLMA 269 (281)
Q Consensus 193 ~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvell~L~~ 269 (281)
..++++|++|++++... |++ ..+++||++=-. |......++.++++++.++.
T Consensus 50 ~~e~~~v~~G~~~~~~~-------~~~----~~l~~Gd~~~ip--------------~~~~H~~~~~~~~~~l~i~~ 101 (102)
T 3d82_A 50 TDEVFIVMEGTLQIAFR-------DQN----ITLQAGEMYVIP--------------KGVEHKPMAKEECKIMIIEP 101 (102)
T ss_dssp CCEEEEEEESEEEEECS-------SCE----EEEETTEEEEEC--------------TTCCBEEEEEEEEEEEEEEE
T ss_pred CcEEEEEEeCEEEEEEC-------CEE----EEEcCCCEEEEC--------------CCCeEeeEcCCCCEEEEEEc
Confidence 48999999999987542 232 569999986321 11223455567888887753
No 87
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=67.27 E-value=14 Score=33.49 Aligned_cols=53 Identities=6% Similarity=-0.019 Sum_probs=36.7
Q ss_pred ceeEEecCCCeEEccCCC-cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 175 VKPAVFTERSYIIQEENP-IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 175 l~~~~y~kGe~I~rEGDp-~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+....+.+|...-..-.+ .+++++|++|++++...+ .+|+... ..+++||++=
T Consensus 54 ~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~----~~g~~~~--~~l~~GD~~~ 107 (361)
T 2vqa_A 54 GVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTS----PEGKVEI--ADVDKGGLWY 107 (361)
T ss_dssp EEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEEC----TTSCEEE--EEEETTEEEE
T ss_pred eEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEe----CCCcEEE--EEEcCCCEEE
Confidence 344567788865443345 899999999999988765 2443222 5799999863
No 88
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=67.13 E-value=5.6 Score=32.76 Aligned_cols=46 Identities=9% Similarity=0.009 Sum_probs=32.9
Q ss_pred eEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 177 PAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 177 ~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
...+.+|..+-..-.+..++++|++|++++.. +|++ ..+++||++=
T Consensus 57 ~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v-------~g~~----~~l~~GD~i~ 102 (166)
T 3jzv_A 57 YFEVGPGGHSTLERHQHAHGVMILKGRGHAMV-------GRAV----SAVAPYDLVT 102 (166)
T ss_dssp EEEEEEEEECCCBBCSSCEEEEEEEECEEEEE-------TTEE----EEECTTCEEE
T ss_pred EEEECCCCccCceeCCCcEEEEEEeCEEEEEE-------CCEE----EEeCCCCEEE
Confidence 34567776665555567899999999999754 3343 5799999873
No 89
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=66.72 E-value=10 Score=28.61 Aligned_cols=78 Identities=9% Similarity=0.013 Sum_probs=47.2
Q ss_pred eeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceE
Q 023527 176 KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKT 255 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~T 255 (281)
....+.+|...-..-....++++|++|+++.... |++ ..+++||++=-. |.....
T Consensus 37 ~~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i~-------~~~----~~l~~Gd~~~i~--------------~~~~H~ 91 (128)
T 4i4a_A 37 AWCIVRPETKSFRHSHNEYELFIVIQGNAIIRIN-------DED----FPVTKGDLIIIP--------------LDSEHH 91 (128)
T ss_dssp EEEEECTTEECCCBCCSSEEEEEEEESEEEEEET-------TEE----EEEETTCEEEEC--------------TTCCEE
T ss_pred EEEEECCCCccCCEecCCeEEEEEEeCEEEEEEC-------CEE----EEECCCcEEEEC--------------CCCcEE
Confidence 3355667765444444678999999999987653 242 579999987321 011123
Q ss_pred EEEc--ccEE--EEEEcHHHHHHHHhh
Q 023527 256 IQAL--TKVE--AFVLMAYDLKQVLLN 278 (281)
Q Consensus 256 V~Al--tdve--ll~L~~edL~~l~~~ 278 (281)
+++. ++++ ++.++.+-+..+..+
T Consensus 92 ~~~~~~~~~~~~~i~f~~~~~~~~~~~ 118 (128)
T 4i4a_A 92 VINNNQEDFHFYTIWWDKESTLNFLTR 118 (128)
T ss_dssp EEECSSSCEEEEEEEECHHHHHHHHHH
T ss_pred eEeCCCCCEEEEEEEECHHHHHHHHHh
Confidence 3443 3333 456777777766654
No 90
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=65.05 E-value=10 Score=33.71 Aligned_cols=50 Identities=26% Similarity=0.268 Sum_probs=38.3
Q ss_pred hcceeEEecCCCeEEc-cCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 173 DVVKPAVFTERSYIIQ-EENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 173 ~~l~~~~y~kGe~I~r-EGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
-.+....+++|..|-. +-...++.++|++|+..... +|++ ..+++||++-
T Consensus 191 ~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~-------~~~~----~~v~~GD~~~ 241 (278)
T 1sq4_A 191 MHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRL-------NQDW----VEVEAGDFMW 241 (278)
T ss_dssp EEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEE-------TTEE----EEEETTCEEE
T ss_pred eEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEE-------CCEE----EEeCCCCEEE
Confidence 4466788999999985 55556789999999998654 4443 6799999974
No 91
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=64.98 E-value=11 Score=33.02 Aligned_cols=46 Identities=13% Similarity=0.015 Sum_probs=33.9
Q ss_pred EEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 178 AVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 178 ~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
..+.+|..+=.--.+.+++|+|++|.++....+ |+. ..+++||.+=
T Consensus 137 v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v~~------g~~----~~l~pGd~v~ 182 (217)
T 4b29_A 137 GYWGPGLDYGWHEHLPEELYSVVSGRALFHLRN------APD----LMLEPGQTRF 182 (217)
T ss_dssp EEECSSCEEEEEECSSEEEEEEEEECEEEEETT------SCC----EEECTTCEEE
T ss_pred EEECCCCcCCCCCCCCceEEEEEeCCEEEEECC------CCE----EecCCCCEEE
Confidence 556666665555577899999999999987643 332 5699999874
No 92
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=64.63 E-value=19 Score=30.21 Aligned_cols=46 Identities=13% Similarity=0.186 Sum_probs=37.4
Q ss_pred hcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 173 DVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 173 ~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
.++...++++|..+-....+..++.+|++|.++ + ++ ..+.+||+.=
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~----d-----e~------~~~~~Gd~~~ 170 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHRGLELTLVLQGAFR----D-----ET------DRFGAGDIEI 170 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCSSCEEEEEEESEEE----C-----SS------SEEETTCEEE
T ss_pred cEEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE----C-----Cc------EEECCCeEEE
Confidence 456678899999999999999999999999866 4 21 3488999963
No 93
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=64.50 E-value=15 Score=33.20 Aligned_cols=53 Identities=15% Similarity=0.111 Sum_probs=36.6
Q ss_pred ceeEEecCCCeEEccCCCc-CeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 175 VKPAVFTERSYIIQEENPI-DQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 175 l~~~~y~kGe~I~rEGDp~-~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+....+.+|..+-..-.+. +++++|++|++++...+ .+|+... ..+++||++=
T Consensus 236 ~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~----~~g~~~~--~~l~~GD~~~ 289 (361)
T 2vqa_A 236 GALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFA----SEGKASV--SRLQQGDVGY 289 (361)
T ss_dssp EEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEEC----STTCEEE--EEECTTCEEE
T ss_pred EEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEc----CCCcEEE--EEECCCCEEE
Confidence 3456788888765444444 89999999999987644 1444111 5799999974
No 94
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=64.06 E-value=5.6 Score=37.71 Aligned_cols=53 Identities=11% Similarity=0.125 Sum_probs=39.2
Q ss_pred Hhhcc--eeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 171 LCDVV--KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 171 I~~~l--~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+...+ ....+.+|+.+-..-....++|||++|+-..+..+ | ++ ..+++||++=
T Consensus 119 ~t~~L~a~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t~v~-----G-~~----~~~~~GD~i~ 173 (394)
T 3bu7_A 119 ACGWLFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVD-----G-HK----VELGANDFVL 173 (394)
T ss_dssp SBTTBEEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEET-----T-EE----EEECTTCEEE
T ss_pred cCCeeEEEEEEECCCCCcCCccCCcceEEEEEEeeEEEEEEC-----C-EE----EEEcCCCEEE
Confidence 34444 66789999988777777789999999987554444 3 43 5689999973
No 95
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=63.67 E-value=14 Score=33.84 Aligned_cols=52 Identities=8% Similarity=-0.035 Sum_probs=37.4
Q ss_pred ceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 175 VKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 175 l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
+....+.+|..+-..-.+..++++|++|++++...+ .+|+... ..+++||++
T Consensus 81 ~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~----~~g~~~~--~~l~~GD~~ 132 (385)
T 1j58_A 81 SVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVD----EKGRSFI--DDVGEGDLW 132 (385)
T ss_dssp EEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEEC----TTSCEEE--EEEETTEEE
T ss_pred EEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEe----CCCcEEE--EEeCCCCEE
Confidence 445677888876544445899999999999988766 2455211 469999986
No 96
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=63.63 E-value=6.6 Score=32.77 Aligned_cols=32 Identities=16% Similarity=-0.011 Sum_probs=25.0
Q ss_pred CCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 191 NPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 191 Dp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
...+.+++|++|++++...+ ++ ..|++||.+=
T Consensus 108 h~gEE~~yVLeG~v~vtl~g-------~~----~~L~~Gds~~ 139 (166)
T 2vpv_A 108 FRTYITFHVIQGIVEVTVCK-------NK----FLSVKGSTFQ 139 (166)
T ss_dssp CSEEEEEEEEESEEEEEETT-------EE----EEEETTCEEE
T ss_pred CCceEEEEEEEeEEEEEECC-------EE----EEEcCCCEEE
Confidence 35688999999999987633 43 5799999974
No 97
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=63.20 E-value=12 Score=32.79 Aligned_cols=48 Identities=13% Similarity=0.111 Sum_probs=35.3
Q ss_pred ceeEEecCCCeEEc-cCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 175 VKPAVFTERSYIIQ-EENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 175 l~~~~y~kGe~I~r-EGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+....+++|..+-. .-.+.+++++|++|+++... +|++ ..+++||++=
T Consensus 184 ~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i-------~~~~----~~l~~GD~i~ 232 (274)
T 1sef_A 184 MHILSFEPGASHAYIETHVQEHGAYLISGQGMYNL-------DNEW----YPVEKGDYIF 232 (274)
T ss_dssp EEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEE-------TTEE----EEEETTCEEE
T ss_pred EEEEEECCCCccCcceeccCeEEEEEEeCEEEEEE-------CCEE----EEECCCCEEE
Confidence 34457889887744 44567899999999999765 3343 5799999973
No 98
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=62.98 E-value=9.1 Score=30.58 Aligned_cols=51 Identities=12% Similarity=-0.029 Sum_probs=33.2
Q ss_pred eeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCC-----cceeeeeecCCceec
Q 023527 176 KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSN-----SGNLNNHLEGGDFSG 233 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr-----~~~~~~~L~~GDffG 233 (281)
....+.+|..+-..-.+..++++|++|++++...+ +++ ... ..+++||++=
T Consensus 44 ~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~-----~~~~~~~~~~~--~~l~~Gd~i~ 99 (163)
T 1lr5_A 44 WLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGS-----SSLKYPGQPQE--IPFFQNTTFS 99 (163)
T ss_dssp EEEEECTTCBCCEEEESSCEEEEEEECCEEEEECC-----SSSSSCCSCEE--EEECTTEEEE
T ss_pred EEEEECCCCcCCCeECCCCeEEEEEeCEEEEEECC-----ccccccCccEE--EEeCCCCEEE
Confidence 34567777765333335678999999999987644 221 011 5799999863
No 99
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=62.87 E-value=18 Score=28.78 Aligned_cols=52 Identities=12% Similarity=0.002 Sum_probs=38.1
Q ss_pred cceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceech
Q 023527 174 VVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGE 234 (281)
Q Consensus 174 ~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE 234 (281)
.+...++++|..+-.--.+..+.++|++|+.+. . .|....- ..+++||+.=.
T Consensus 45 ~~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~---~-----~g~~~~~-~~~~~Gd~~~~ 96 (145)
T 2o1q_A 45 WTAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDV---R-----GGKAAGG-DTAIAPGYGYE 96 (145)
T ss_dssp EEEEEEECTTEEECCEEESSCEEEEEEEEEEEE---T-----TCGGGTS-EEEESSEEEEE
T ss_pred EEEEEEECCCCCCCccCCCCCEEEEEEEeEEEE---c-----CCCEecc-eEeCCCEEEEE
Confidence 456688999999988888889999999999983 2 2221100 35889999754
No 100
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=62.62 E-value=13 Score=32.09 Aligned_cols=47 Identities=11% Similarity=0.068 Sum_probs=35.7
Q ss_pred cceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCce
Q 023527 174 VVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDF 231 (281)
Q Consensus 174 ~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDf 231 (281)
.+....+.+|+.+-..--+..++++|++|++++.. + | ++ ..+.|||.
T Consensus 35 ~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~-~-----~-~~----~~l~~Gd~ 81 (243)
T 3h7j_A 35 EVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTV-G-----D-VT----RKMTALES 81 (243)
T ss_dssp EEEEEEECTTEEEEEECCSSEEEEEEEESEEEEEE-T-----T-EE----EEEETTTC
T ss_pred EEEEEEECCCCccCCEECCCcEEEEEEEeEEEEEE-C-----C-EE----EEECCCCE
Confidence 34445689998887666778899999999999865 3 2 32 56999994
No 101
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=62.06 E-value=12 Score=28.15 Aligned_cols=47 Identities=13% Similarity=0.186 Sum_probs=30.4
Q ss_pred eeEEecCCCeEE--ccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 176 KPAVFTERSYII--QEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 176 ~~~~y~kGe~I~--rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
....+.+|..+- +.-+..+.+|+|++|++++.. +|++ ..+++||++=
T Consensus 29 ~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i-------~~~~----~~l~~Gd~i~ 77 (125)
T 3cew_A 29 SINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITI-------DGEK----IELQAGDWLR 77 (125)
T ss_dssp EEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEE-------TTEE----EEEETTEEEE
T ss_pred EEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEE-------CCEE----EEeCCCCEEE
Confidence 345677777652 333334456779999998765 2242 5699999873
No 102
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=61.89 E-value=17 Score=35.27 Aligned_cols=50 Identities=10% Similarity=0.189 Sum_probs=33.6
Q ss_pred EEecCCCeEEccCCC-cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 178 AVFTERSYIIQEENP-IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 178 ~~y~kGe~I~rEGDp-~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
..+.+|.++-.-=.| ++++++|++|++++...+ .+|...+. ..+++||++
T Consensus 343 v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~----~~G~~~~~-~~l~~GDv~ 393 (476)
T 1fxz_A 343 GSLRKNAMFVPHYNLNANSIIYALNGRALIQVVN----CNGERVFD-GELQEGRVL 393 (476)
T ss_dssp EEECTTCEEEEEEETTCCEEEEEEESEEEEEEEC----TTSCEEEE-EEEETTCEE
T ss_pred EEecCCceecceECCCCCEEEEEEeCEEEEEEEe----cCCCEEee-eEEcCCCEE
Confidence 445666654433335 789999999999987765 24443222 569999987
No 103
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=61.19 E-value=20 Score=35.30 Aligned_cols=61 Identities=11% Similarity=0.094 Sum_probs=43.4
Q ss_pred HHHHHhhcceeEEecCCCeEEccCCC-cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 167 SLEKLCDVVKPAVFTERSYIIQEENP-IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 167 ~L~~I~~~l~~~~y~kGe~I~rEGDp-~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
.|..+--.+....+.+|.++-.-=.| ++++++|++|++++...+ .+|+..+. ..+++||++
T Consensus 388 ~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~----~~G~~v~~-~~L~~GDV~ 449 (531)
T 3fz3_A 388 ILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVN----ENGDAILD-QEVQQGQLF 449 (531)
T ss_dssp HHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEEC----TTSCEEEE-EEEETTCEE
T ss_pred ccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEe----CCCcEEEE-EEecCCeEE
Confidence 44444445566788899887544344 799999999999988766 24543333 689999997
No 104
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=60.51 E-value=14 Score=31.94 Aligned_cols=45 Identities=16% Similarity=0.169 Sum_probs=33.1
Q ss_pred eeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 176 KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
....+++|...-..- .+++++|++|++++.. +|++ ..|++||++=
T Consensus 53 ~~~~l~Pg~~~~~~~--~ee~~~Vl~G~~~~~~-------~~~~----~~l~~Gd~~~ 97 (246)
T 1sfn_A 53 FTAEMPAGAQATESV--YQRFAFVLSGEVDVAV-------GGET----RTLREYDYVY 97 (246)
T ss_dssp EEEEECTTCEEECCS--SEEEEEEEEEEEEEEC-------SSCE----EEECTTEEEE
T ss_pred EEEEECCCCcCCCCc--eeEEEEEEECEEEEEE-------CCEE----EEECCCCEEE
Confidence 345678887665442 7889999999999865 3343 5799999874
No 105
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=60.49 E-value=20 Score=35.05 Aligned_cols=57 Identities=12% Similarity=0.156 Sum_probs=38.9
Q ss_pred HhhcceeEEecCCCeEEccCCC-cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 171 LCDVVKPAVFTERSYIIQEENP-IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 171 I~~~l~~~~y~kGe~I~rEGDp-~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
+--.+....+.+|.++-.-=.| ++++++|++|++++...+ .+|...+. ..+++||++
T Consensus 370 l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~----~~G~~~~~-~~l~~GDv~ 427 (510)
T 3c3v_A 370 LGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVD----SNGNRVYD-EELQEGHVL 427 (510)
T ss_dssp HTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEEC----TTSCEEEE-EEEETTCEE
T ss_pred ceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEe----CCCCEEEe-EEEcCCcEE
Confidence 3334455677888866544445 789999999999987765 24443222 569999987
No 106
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=60.23 E-value=17 Score=32.28 Aligned_cols=47 Identities=17% Similarity=0.115 Sum_probs=33.7
Q ss_pred eeEEecCCCeEEccCCC-cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 176 KPAVFTERSYIIQEENP-IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp-~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
......+|...-..-.+ .+++++|++|++++.. +|++ ..+++||++=
T Consensus 49 ~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~-------~~~~----~~l~~Gd~~~ 96 (337)
T 1y3t_A 49 VLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL-------DGER----YLLISGDYAN 96 (337)
T ss_dssp EEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE-------TTEE----EEECTTCEEE
T ss_pred EEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE-------CCEE----EEECCCCEEE
Confidence 34567888766433344 8999999999999864 3343 5699999863
No 107
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=60.16 E-value=21 Score=34.64 Aligned_cols=61 Identities=15% Similarity=0.092 Sum_probs=41.4
Q ss_pred HHHHhhcceeEEecCCCeEEccCCC-cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 168 LEKLCDVVKPAVFTERSYIIQEENP-IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 168 L~~I~~~l~~~~y~kGe~I~rEGDp-~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+..+--.+....+.+|..+-.-=.| ++++++|++|++++...+ ..|+..+. ..+++||++=
T Consensus 362 L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~----~~g~~~~~-~~l~~GDv~v 423 (493)
T 2d5f_A 362 LRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVN----AQGNAVFD-GELRRGQLLV 423 (493)
T ss_dssp HHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEEC----TTSCEEEE-EEEETTCEEE
T ss_pred ccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEc----CCCCEEEe-EEEcCCCEEE
Confidence 3444445566778888866554445 789999999999987766 23443221 5699999973
No 108
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=59.65 E-value=20 Score=28.25 Aligned_cols=48 Identities=23% Similarity=0.254 Sum_probs=33.5
Q ss_pred eeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 176 KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
....+.+|..+-..-.+..++++|++|++++...+ ++. ..+++||++=
T Consensus 51 ~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~-------~~~---~~l~~Gd~i~ 98 (147)
T 2f4p_A 51 YDVVFEPGARTHWHSHPGGQILIVTRGKGFYQERG-------KPA---RILKKGDVVE 98 (147)
T ss_dssp EEEEECTTCEECSEECTTCEEEEEEEEEEEEEETT-------SCC---EEEETTCEEE
T ss_pred EEEEECCCCccCceECCCceEEEEEeCEEEEEECC-------EEE---EEECCCCEEE
Confidence 44567888776444445689999999999976533 320 3589999874
No 109
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=59.40 E-value=19 Score=34.67 Aligned_cols=50 Identities=8% Similarity=0.044 Sum_probs=37.2
Q ss_pred CCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEec
Q 023527 160 FGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSR 210 (281)
Q Consensus 160 F~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~ 210 (281)
|..=+ ++|..+--.+....+++|.++.--=.+++++++|++|+..+....
T Consensus 51 ~~~~~-~~l~~~gvs~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~ 100 (459)
T 2e9q_A 51 WDQDN-DEFQCAGVNMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAI 100 (459)
T ss_dssp CCTTS-HHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECC
T ss_pred cCCCC-hhhccCceEEEEEEEcCCCEecceecCCceEEEEEeeEEEEEEEe
Confidence 44433 456655556677889999988665567999999999999987665
No 110
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=59.18 E-value=21 Score=32.66 Aligned_cols=51 Identities=10% Similarity=0.061 Sum_probs=35.0
Q ss_pred eEEecCCCeEEccCCCc-CeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 177 PAVFTERSYIIQEENPI-DQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 177 ~~~y~kGe~I~rEGDp~-~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
...+.+|..+-..-.+. +++++|++|++++...+ .+|+... ..+++||++=
T Consensus 261 ~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~----~~g~~~~--~~l~~GD~~~ 312 (385)
T 1j58_A 261 LVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFA----SDGHART--FNYQAGDVGY 312 (385)
T ss_dssp EEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEE----ETTEEEE--EEEESSCEEE
T ss_pred EEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEc----CCCcEEE--EEEcCCCEEE
Confidence 35677887765444455 89999999999987653 1333111 5799999974
No 111
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=59.04 E-value=14 Score=27.82 Aligned_cols=44 Identities=14% Similarity=0.207 Sum_probs=28.9
Q ss_pred cCCCeEEc---cCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 181 TERSYIIQ---EENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 181 ~kGe~I~r---EGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
.+|+.... -..+.+++++|++|++++...+ ++.. ..|++||.+-
T Consensus 38 ~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~~~-------~~~~--~~l~~Gd~i~ 84 (112)
T 2opk_A 38 SNGQASPPGFWYDSPQDEWVMVVSGSAGIECEG-------DTAP--RVMRPGDWLH 84 (112)
T ss_dssp ESSCCCCTTCCBCCSSEEEEEEEESCEEEEETT-------CSSC--EEECTTEEEE
T ss_pred eCCccCCCCccccCCccEEEEEEeCeEEEEECC-------EEEE--EEECCCCEEE
Confidence 45554332 2356789999999999987643 3210 2599999874
No 112
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=59.03 E-value=7.7 Score=29.80 Aligned_cols=47 Identities=9% Similarity=0.085 Sum_probs=29.3
Q ss_pred EEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 178 AVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 178 ~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
..+.+|..+-.--.+..++++|++|++++.... +|++ ..+++||++=
T Consensus 44 ~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~-----~~~~----~~l~~Gd~~~ 90 (145)
T 3ht1_A 44 FEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPD-----QGRT----EEVGPGEAIF 90 (145)
T ss_dssp EEEEEEEECCCEECSSCEEEEEEEECEEEEEGG-----GTEE----EEECTTCEEE
T ss_pred EEECCCCcCCCccCCCceEEEEEEeEEEEEEeE-----CCEE----EEECCCCEEE
Confidence 344555543333344567788999999976322 3343 5799999863
No 113
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=58.79 E-value=19 Score=29.69 Aligned_cols=49 Identities=12% Similarity=0.127 Sum_probs=38.0
Q ss_pred cceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceech
Q 023527 174 VVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGE 234 (281)
Q Consensus 174 ~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE 234 (281)
.+...++++|..+-.-..+..+..+|++|.++. .+ ++. ..+++||++=+
T Consensus 44 ~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~--~~-----~~~-----~~~~aGd~~~~ 92 (165)
T 3cjx_A 44 MVMRASFAPGLTLPLHFHTGTVHMYTISGCWYY--TE-----YPG-----QKQTAGCYLYE 92 (165)
T ss_dssp EEEEEEECTTCBCCEEEESSCEEEEEEESEEEE--TT-----CTT-----SCEETTEEEEE
T ss_pred EEEEEEECCCCcCCcccCCCCEEEEEEEEEEEE--CC-----Cce-----EEECCCeEEEe
Confidence 456788999999988888899999999999874 12 212 34789998755
No 114
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=58.44 E-value=8.6 Score=31.54 Aligned_cols=32 Identities=16% Similarity=0.188 Sum_probs=24.8
Q ss_pred CCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 191 NPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 191 Dp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
.+.+++++|++|++++.. + |++ ..++|||.+=
T Consensus 82 ~~~eE~~yVLeG~~~l~i-~------g~~----~~l~~GD~i~ 113 (151)
T 4axo_A 82 LNYDEIDYVIDGTLDIII-D------GRK----VSASSGELIF 113 (151)
T ss_dssp CSSEEEEEEEEEEEEEEE-T------TEE----EEEETTCEEE
T ss_pred CCCcEEEEEEEeEEEEEE-C------CEE----EEEcCCCEEE
Confidence 357799999999999874 3 343 5799999973
No 115
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=58.20 E-value=10 Score=30.96 Aligned_cols=44 Identities=16% Similarity=0.174 Sum_probs=28.5
Q ss_pred EccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 187 IQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 187 ~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
.+.-+..|++|+|++|++.+...+.. ..+++.+. ..|+||+++=
T Consensus 44 ~h~H~~tDE~Fivl~G~l~i~~rd~~-~~~~~d~~--V~l~~Ge~yv 87 (140)
T 3d0j_A 44 LEIHHSTDEQFILSAGKAILITAEKE-NDKFNIEL--TLMEKGKVYN 87 (140)
T ss_dssp EEEESSCCEEEEEEESCEEEEEEEEE-TTEEEEEE--EECCTTCCEE
T ss_pred hccCCCCCeEEEEEecEEEEEEecCc-CCCCccce--EEecCCCEEE
Confidence 44556789999999999998765400 00011111 5789999974
No 116
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=57.41 E-value=13 Score=35.29 Aligned_cols=53 Identities=17% Similarity=0.232 Sum_probs=39.5
Q ss_pred cceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 174 VVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 174 ~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
.+....+++|..+..--..++++++|++|+.++...+ .|.. .. ..+++||++-
T Consensus 50 s~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~-----~~~~-~~-~~l~~GDv~~ 102 (416)
T 1uij_A 50 RIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVN-----NDDR-DS-YNLHPGDAQR 102 (416)
T ss_dssp EEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEEC-----SSCE-EE-EEECTTEEEE
T ss_pred EEEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEE-----CCCC-eE-EEecCCCEEE
Confidence 4566789999977666666899999999999987765 2221 11 6799999973
No 117
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=57.31 E-value=8.8 Score=33.88 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=29.7
Q ss_pred CCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 182 ERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 182 kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+|+.... --|.+++.+|++|++.+.. + | +. ..+++||.+-
T Consensus 55 ~g~~~v~-~~p~dE~~~VleG~~~lt~-~-----g-~~----~~~~~Gd~~~ 94 (238)
T 3myx_A 55 GTALSVE-AYPYTEMLVMHRGSVTLTS-G-----T-DS----VTLSTGESAV 94 (238)
T ss_dssp CSEEEES-SCSSEEEEEEEESEEEEEE-T-----T-EE----EEEETTCEEE
T ss_pred ccccccc-cCCCcEEEEEEEeEEEEEC-C-----C-eE----EEEcCCCEEE
Confidence 6665553 3567899999999999865 4 3 32 5799999874
No 118
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=56.30 E-value=9.2 Score=35.30 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=35.1
Q ss_pred eeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 176 KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
....+.+|+..-..-.+..++++|++|+.+.+..+ | ++ ..+++||++=
T Consensus 103 ~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t~v~-----g-~~----~~l~~GD~~~ 150 (354)
T 2d40_A 103 GLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAVD-----G-ER----TPMNEGDFIL 150 (354)
T ss_dssp EEEEECTTCEEEEEEESSCEEEEEEECSSCEEEET-----T-EE----EECCTTCEEE
T ss_pred EEEEECCCCCcCCeecCcceEEEEEEEEEEEEEEC-----C-EE----EEEcCCCEEE
Confidence 45678899887444446789999999998774444 3 32 5799999974
No 119
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=56.17 E-value=13 Score=33.82 Aligned_cols=63 Identities=11% Similarity=0.131 Sum_probs=42.2
Q ss_pred eEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEEEcccEEE
Q 023527 185 YIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALTKVEA 264 (281)
Q Consensus 185 ~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~Altdvel 264 (281)
..++ -++.+++|++++|.+.+-..+ +|+-.- ..+++||+|=- |+ +.|.++ +|-++|..
T Consensus 44 ~d~H-~~~~dE~FyqlkG~m~l~~~d-----~g~~~~--V~i~eGemfll--------P~---gv~HsP---~r~~et~g 101 (286)
T 2qnk_A 44 KDYH-IEEGEEVFYQLEGDMVLRVLE-----QGKHRD--VVIRQGEIFLL--------PA---RVPHSP---QRFANTVG 101 (286)
T ss_dssp CCEE-ECSSCEEEEEEESCEEEEEEE-----TTEEEE--EEECTTEEEEE--------CT---TCCEEE---EECTTCEE
T ss_pred ccCc-CCCCCeEEEEEeCeEEEEEEe-----CCceee--EEECCCeEEEe--------CC---CCCcCC---cccCCeEE
Confidence 4445 556899999999999988777 553111 57999999832 22 123232 55778888
Q ss_pred EEEcH
Q 023527 265 FVLMA 269 (281)
Q Consensus 265 l~L~~ 269 (281)
+.+.+
T Consensus 102 LviE~ 106 (286)
T 2qnk_A 102 LVVER 106 (286)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 88764
No 120
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=56.13 E-value=21 Score=31.96 Aligned_cols=69 Identities=16% Similarity=0.152 Sum_probs=43.9
Q ss_pred eeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceE
Q 023527 176 KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKT 255 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~T 255 (281)
....+++|..--......+++.+|++|++++...+ |++ ..|++||++=-.. ....+
T Consensus 73 ~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~l~~------g~~----~~L~~Gds~y~p~--------------~~~H~ 128 (266)
T 4e2q_A 73 YLAKMKEMSSSGLPPQDIERLIFVVEGAVTLTNTS------SSS----KKLTVDSYAYLPP--------------NFHHS 128 (266)
T ss_dssp EEEEECSSEECCCCCTTEEEEEEEEEECEEEEC--------CCC----EEECTTEEEEECT--------------TCCCE
T ss_pred EEEEECcCCcCCCCCCCCeEEEEEEEEEEEEEECC------CcE----EEEcCCCEEEECC--------------CCCEE
Confidence 34667888764333455889999999999987531 453 5799999974321 11223
Q ss_pred EEEcccEEEEEEc
Q 023527 256 IQALTKVEAFVLM 268 (281)
Q Consensus 256 V~Altdvell~L~ 268 (281)
.+..++++++.+.
T Consensus 129 ~~N~~~Ar~l~V~ 141 (266)
T 4e2q_A 129 LDCVESATLVVFE 141 (266)
T ss_dssp EEESSCEEEEEEE
T ss_pred EEeCCCEEEEEEE
Confidence 4445677777764
No 121
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=55.80 E-value=10 Score=33.62 Aligned_cols=46 Identities=13% Similarity=0.215 Sum_probs=32.1
Q ss_pred eEEecCCCeEEc--cCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 177 PAVFTERSYIIQ--EENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 177 ~~~y~kGe~I~r--EGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
...+.+|...-. ...+.+++++|++|++++... |++ ..|++||++=
T Consensus 72 ~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v~-------g~~----~~L~~GD~i~ 119 (278)
T 1sq4_A 72 IVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQ-------GQV----HAMQPGGYAF 119 (278)
T ss_dssp EEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEES-------SCE----EEECTTEEEE
T ss_pred EEEECCCCccCCCCcCCCceEEEEEEeCEEEEEEC-------CEE----EEECCCCEEE
Confidence 455677766521 224478999999999998653 343 5799999874
No 122
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=55.63 E-value=16 Score=34.91 Aligned_cols=60 Identities=17% Similarity=0.142 Sum_probs=43.0
Q ss_pred HHHHHh-hcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 167 SLEKLC-DVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 167 ~L~~I~-~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
++..+. -.+....+++|..+-.--..++++++|++|+..+...+ .+.. .. ..+++||++-
T Consensus 54 ~l~~~~~~s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~-----~~~~-~~-~~l~~GDv~~ 114 (434)
T 2ea7_A 54 QMQNLENYRVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVN-----PDSR-DS-YILEQGHAQK 114 (434)
T ss_dssp GGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEEC-----SSCE-EE-EEEETTEEEE
T ss_pred ccCccccEEEEEEEecCCcCccCccCCCceEEEEEecEEEEEEEe-----CCCC-EE-EEeCCCCEEE
Confidence 344443 45667889999988777556899999999999987765 2221 12 6799999973
No 123
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=55.34 E-value=13 Score=30.43 Aligned_cols=67 Identities=10% Similarity=0.077 Sum_probs=47.7
Q ss_pred hcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCc
Q 023527 173 DVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPIS 252 (281)
Q Consensus 173 ~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s 252 (281)
......++++|..+-+-..+..+..+|++|..+.. + +| ..+.+||+.=+. +-+
T Consensus 42 ~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~--e-----~~------~~~~~Gd~~~~P--------------~g~ 94 (159)
T 3ebr_A 42 ETITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYK--E-----HD------WVAHAGSVVYET--------------AST 94 (159)
T ss_dssp EEEEEEEECSSCBCCCEEESSCEEEEEEESCEEET--T-----SS------CCBCTTCEEEEC--------------SSE
T ss_pred eEEEEEEECCCCCcccccCCCCEEEEEEEeEEEEe--C-----CC------eEECCCeEEEEC--------------CCC
Confidence 45566889999999988888899999999998741 2 22 248899996542 123
Q ss_pred ceEEEEc----ccEEEEE
Q 023527 253 TKTIQAL----TKVEAFV 266 (281)
Q Consensus 253 ~~TV~Al----tdvell~ 266 (281)
..+..+. ++|.++.
T Consensus 95 ~H~~~~~~~~~e~~~~~~ 112 (159)
T 3ebr_A 95 RHTPQSAYAEGPDIITFN 112 (159)
T ss_dssp EECEEESSSSSSCEEEEE
T ss_pred cceeEeCCCCCCCEEEEE
Confidence 4556666 6677766
No 124
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=54.69 E-value=11 Score=32.73 Aligned_cols=46 Identities=15% Similarity=0.229 Sum_probs=31.4
Q ss_pred eEEecCCCeEEcc-C-CCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 177 PAVFTERSYIIQE-E-NPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 177 ~~~y~kGe~I~rE-G-Dp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
...+.+|...-.. . ...+++++|++|++++.. +|++ ..|++||.+=
T Consensus 63 ~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~-------~~~~----~~L~~Gd~~~ 110 (261)
T 1rc6_A 63 LVTLHQNGGNQQGFGGEGIETFLYVISGNITAKA-------EGKT----FALSEGGYLY 110 (261)
T ss_dssp EEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEE-------TTEE----EEEETTEEEE
T ss_pred EEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEE-------CCEE----EEECCCCEEE
Confidence 3556677654332 1 235789999999999875 3343 5799999874
No 125
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=54.51 E-value=25 Score=33.97 Aligned_cols=51 Identities=8% Similarity=-0.022 Sum_probs=38.1
Q ss_pred CCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEec
Q 023527 159 EFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSR 210 (281)
Q Consensus 159 lF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~ 210 (281)
.|..=+ +.|..+--.+....+++|..+.--=.+++++++|++|+..+...+
T Consensus 35 ~~~~~~-~~l~~~gvs~~r~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~ 85 (476)
T 1fxz_A 35 TWNPNN-KPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIY 85 (476)
T ss_dssp ECCTTS-HHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEEC
T ss_pred eeCCCC-hhhccCceEEEEEEEcCCCEecceecCCceEEEEEecEEEEEEEc
Confidence 354433 455555556677889999988666667999999999999987766
No 126
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=54.45 E-value=14 Score=32.04 Aligned_cols=48 Identities=15% Similarity=0.072 Sum_probs=34.1
Q ss_pred ceeEEecCCCeEEccC-CCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 175 VKPAVFTERSYIIQEE-NPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 175 l~~~~y~kGe~I~rEG-Dp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+....+++|..+-..- ...+++++|++|++++.. +|++ ..+++||++=
T Consensus 181 ~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i-------~~~~----~~l~~GD~i~ 229 (261)
T 1rc6_A 181 MHILSFAPGASHGYIETHVQEHGAYILSGQGVYNL-------DNNW----IPVKKGDYIF 229 (261)
T ss_dssp EEEEEECTTCCBEEEEEESSCEEEEEEESEEEEES-------SSCE----EEEETTCEEE
T ss_pred EEEEEECCCCccCcccCCCceEEEEEEEeEEEEEE-------CCEE----EEeCCCCEEE
Confidence 3556788888654333 346799999999999754 3343 5799999973
No 127
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=54.28 E-value=31 Score=33.15 Aligned_cols=60 Identities=8% Similarity=0.091 Sum_probs=40.2
Q ss_pred HHHHhhcceeEEecCCCeEEccCCC-cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 168 LEKLCDVVKPAVFTERSYIIQEENP-IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 168 L~~I~~~l~~~~y~kGe~I~rEGDp-~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
|..+--.+....+.+|.+..--=.| ++++++|++|++++...+ .+|+..+ ...+++||+|
T Consensus 317 L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~----~~g~~~~-~~~l~~GDv~ 377 (459)
T 2e9q_A 317 LRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVD----NFGQSVF-DGEVREGQVL 377 (459)
T ss_dssp HHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEEC----TTSCEEE-EEEEETTCEE
T ss_pred ccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEe----CCCCEEE-eeEEeCCcEE
Confidence 3333334455667777765543334 789999999999988776 2454332 2579999997
No 128
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=52.57 E-value=18 Score=34.68 Aligned_cols=53 Identities=15% Similarity=0.181 Sum_probs=39.1
Q ss_pred cceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 174 VVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 174 ~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
.+....+++|..+-..-..++++++|++|+.++...+ .++++ . ..+++||++-
T Consensus 87 s~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~----~~~~~--~-~~l~~GDv~~ 139 (445)
T 2cav_A 87 RVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVN----PDGRD--T-YKLDQGDAIK 139 (445)
T ss_dssp EEEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEE----TTEEE--E-EEEETTEEEE
T ss_pred EEEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEe----CCCCE--E-EEecCCCEEE
Confidence 4456789999887766556899999999999987655 13231 2 6799999974
No 129
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=52.15 E-value=16 Score=31.34 Aligned_cols=47 Identities=9% Similarity=-0.086 Sum_probs=34.9
Q ss_pred eEEecC-CCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceech
Q 023527 177 PAVFTE-RSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGE 234 (281)
Q Consensus 177 ~~~y~k-Ge~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE 234 (281)
...+++ |..+-..-.+.+++++|++|++++... |++ ..+++||.+--
T Consensus 149 ~~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~i~-------~~~----~~l~~Gd~i~i 196 (243)
T 3h7j_A 149 LAKIPGNGGEMPFHKHRNEQIGICIGGGYDMTVE-------GCT----VEMKFGTAYFC 196 (243)
T ss_dssp EEEECTTTEEEEEECCSSEEEEEECSSCEEEEET-------TEE----EEECTTCEEEE
T ss_pred EEEECCCCCcCCCEeCCCcEEEEEEECEEEEEEC-------CEE----EEECCCCEEEE
Confidence 345888 877766666678999999999997653 232 56999999753
No 130
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=50.74 E-value=14 Score=34.75 Aligned_cols=48 Identities=13% Similarity=0.128 Sum_probs=36.1
Q ss_pred eeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 176 KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
....+.+|+.+-..-...+++++|++|+-..+..+ | ++ ..+++||++=
T Consensus 106 ~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~vd-----G-~~----~~~~~GD~v~ 153 (368)
T 3nw4_A 106 AIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVVN-----G-DP----VRMSRGDLLL 153 (368)
T ss_dssp EEEEECTTCEEEEEEESSCEEEECSSCEEEEEEET-----T-EE----EEEETTCEEE
T ss_pred EEEEECCCCccCceecccceEEEEEecceEEEEEC-----C-EE----EEEeCCCEEE
Confidence 34679999988777777889999999987433444 4 43 5799999974
No 131
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=50.53 E-value=19 Score=32.91 Aligned_cols=70 Identities=13% Similarity=0.021 Sum_probs=48.1
Q ss_pred CCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCC-CcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEEEcc
Q 023527 182 ERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSS-NSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQALT 260 (281)
Q Consensus 182 kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gG-r~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~Alt 260 (281)
+|+.|-.--.+.+++++|++|++++.. +| ++ ..+++||++=-- . -.+.++++.+
T Consensus 261 ~g~~~~~h~~~~~~~~~vleG~~~i~i-------~g~~~----~~l~~Gd~~~iP--------a------g~~h~~~~~~ 315 (350)
T 1juh_A 261 STVTVPTWSFPGACAFQVQEGRVVVQI-------GDYAA----TELGSGDVAFIP--------G------GVEFKYYSEA 315 (350)
T ss_dssp TTSCCCCBCCSSCEEEEEEESCEEEEE-------TTSCC----EEECTTCEEEEC--------T------TCCEEEEESS
T ss_pred CCCCCCcccCCCcEEEEEEeeEEEEEE-------CCeEE----EEeCCCCEEEEC--------C------CCCEEEEecC
Confidence 455666666789999999999999765 33 32 579999997321 1 1345677765
Q ss_pred c-EEEEEEcH--HHHHHHH
Q 023527 261 K-VEAFVLMA--YDLKQVL 276 (281)
Q Consensus 261 d-vell~L~~--edL~~l~ 276 (281)
+ ..++.+.+ +.++..+
T Consensus 316 ~~~~~l~~~~g~~g~~~~~ 334 (350)
T 1juh_A 316 YFSKVLFVSSGSDGLDQNL 334 (350)
T ss_dssp SSEEEEEEEESSSSHHHHH
T ss_pred CeEEEEEEecCccchhhee
Confidence 5 77887776 6666553
No 132
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=50.40 E-value=15 Score=34.69 Aligned_cols=79 Identities=6% Similarity=-0.045 Sum_probs=52.0
Q ss_pred eeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceE
Q 023527 176 KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKT 255 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~T 255 (281)
....+.+|+..-..-...+++|+|++|+..+.. ||++ ..+++||+|=... -....
T Consensus 297 ~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~V-------~ge~----~~~~~GD~~~iP~--------------g~~H~ 351 (394)
T 3bu7_A 297 SMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIV-------GGKR----FDWSEHDIFCVPA--------------WTWHE 351 (394)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEECCEEEEE-------TTEE----EEECTTCEEEECT--------------TCCEE
T ss_pred EEEEECCCCcCCCcccCCcEEEEEEeCeEEEEE-------CCEE----EEEeCCCEEEECC--------------CCeEE
Confidence 556788888887766778899999999985433 3343 5799999985421 01123
Q ss_pred EEE---cccEEEEEEcHHHHHHHHhhh
Q 023527 256 IQA---LTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 256 V~A---ltdvell~L~~edL~~l~~~f 279 (281)
+.. -+++.++.++..-+.+-+.-+
T Consensus 352 ~~N~g~~e~~~ll~i~D~Pl~~~Lgl~ 378 (394)
T 3bu7_A 352 HCNTQERDDACLFSFNDFPVMEKLGFW 378 (394)
T ss_dssp EEECCSSCCEEEEEEESHHHHHHTTCC
T ss_pred eEeCCCCCCeEEEEeeCHHHHHHhhhh
Confidence 333 356778888766666555444
No 133
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=50.23 E-value=27 Score=31.16 Aligned_cols=53 Identities=15% Similarity=0.107 Sum_probs=40.4
Q ss_pred HHhhcceeEEecCCCeEE-ccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 170 KLCDVVKPAVFTERSYII-QEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 170 ~I~~~l~~~~y~kGe~I~-rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
.-.-.++...+++|..|= .|-.+-++-++|++|+..... +|+. ..+++||+.=
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l-------~~~~----~~V~~GD~i~ 236 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRL-------GDNW----YPVQAGDVIW 236 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEE-------TTEE----EEEETTCEEE
T ss_pred ccceEEEEEEECCCcCcCCceEcccceEEEEEeceEEEEE-------CCEE----EEecCCCEEE
Confidence 334456778899999995 677888899999999987653 3343 5789999964
No 134
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=49.68 E-value=16 Score=27.80 Aligned_cols=31 Identities=23% Similarity=0.122 Sum_probs=23.4
Q ss_pred cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 193 IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 193 ~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
.+++++|++|++++... ++++ ..+++||++=
T Consensus 64 ~~E~~~vl~G~~~~~~~------~~~~----~~l~~Gd~~~ 94 (134)
T 2o8q_A 64 GFQLFYVLRGWVEFEYE------DIGA----VMLEAGGSAF 94 (134)
T ss_dssp SCEEEEEEESEEEEEET------TTEE----EEEETTCEEE
T ss_pred CcEEEEEEeCEEEEEEC------CcEE----EEecCCCEEE
Confidence 48999999999997653 2232 5799999873
No 135
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=49.48 E-value=45 Score=30.55 Aligned_cols=77 Identities=8% Similarity=-0.002 Sum_probs=48.7
Q ss_pred EEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEE
Q 023527 178 AVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQ 257 (281)
Q Consensus 178 ~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~ 257 (281)
..+++|...-.--.+..++|+|++|+.++.. ||++ ..+++||.|=--. -....++
T Consensus 273 ~~l~pG~~~~~H~h~~~ev~~v~~G~g~~~v-------~~~~----~~~~~GD~~~vP~--------------~~~H~~~ 327 (354)
T 2d40_A 273 QLLPKGFASRVARTTDSTIYHVVEGSGQVII-------GNET----FSFSAKDIFVVPT--------------WHGVSFQ 327 (354)
T ss_dssp EEECTTCBCCCBEESSCEEEEEEEEEEEEEE-------TTEE----EEEETTCEEEECT--------------TCCEEEE
T ss_pred EEECCCCCCCceecCCcEEEEEEeCeEEEEE-------CCEE----EEEcCCCEEEECC--------------CCeEEEE
Confidence 3555555544434466799999999999765 3343 5699999974320 1234455
Q ss_pred EcccEEEEEEcHHHHHHHHhhh
Q 023527 258 ALTKVEAFVLMAYDLKQVLLNI 279 (281)
Q Consensus 258 Altdvell~L~~edL~~l~~~f 279 (281)
+.++..+|.+.-.-+.+-+.-|
T Consensus 328 n~e~~~l~~~~d~p~~~~lgl~ 349 (354)
T 2d40_A 328 TTQDSVLFSFSDRPVQEALGLF 349 (354)
T ss_dssp EEEEEEEEEEESHHHHHHTTCC
T ss_pred eCCCEEEEEEcCHHHHHHhCce
Confidence 6688888888766555444433
No 136
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=48.59 E-value=42 Score=32.70 Aligned_cols=60 Identities=13% Similarity=0.201 Sum_probs=41.0
Q ss_pred HHHHhhcceeEEecCCCeEEccC-CCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 168 LEKLCDVVKPAVFTERSYIIQEE-NPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 168 L~~I~~~l~~~~y~kGe~I~rEG-Dp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
|..|--.+....+.+|.+.---= -.++++.+|++|++++...+ .+|+.. +...+++||+|
T Consensus 353 L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~----~~g~~~-f~~~l~~GDV~ 413 (496)
T 3ksc_A 353 LRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVN----CNGNTV-FDGELEAGRAL 413 (496)
T ss_dssp HHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEEC----TTSCEE-EEEEEETTCEE
T ss_pred ccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEe----CCCcEE-EEEEecCCeEE
Confidence 34443345556778887664433 34889999999999988776 245532 22679999997
No 137
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=46.80 E-value=18 Score=31.87 Aligned_cols=45 Identities=16% Similarity=0.134 Sum_probs=29.9
Q ss_pred EEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 178 AVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 178 ~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
...++|..... --..+++..|++|++++... +|+. ..+++||.+-
T Consensus 172 W~~tpG~~~~~-~~~~~E~~~ILeG~v~lt~~------~G~~----~~~~aGD~~~ 216 (238)
T 3myx_A 172 WDSTPYERISR-PHKIHELMNLIEGRVVLSLE------NGSS----LTVNTGDTVF 216 (238)
T ss_dssp EEECCEEBCCE-ECSSCEEEEEEECCEEEEET------TSCE----EEECTTCEEE
T ss_pred EEeCCCEEECC-cCCCCEEEEEEEeEEEEEeC------CCCE----EEECCCCEEE
Confidence 44555553221 11467999999999998653 4453 5799999985
No 138
>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}
Probab=45.97 E-value=24 Score=29.62 Aligned_cols=41 Identities=12% Similarity=0.218 Sum_probs=33.3
Q ss_pred hcCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEE
Q 023527 155 LLVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQ 201 (281)
Q Consensus 155 r~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~ 201 (281)
-+.|+|.+++-.+.++++.. ..|++|+|+-...+++.+..+
T Consensus 12 I~HP~F~n~s~~qAe~~L~~------~~G~~liRPSsk~~~ltit~K 52 (178)
T 2xp1_A 12 YKHPLFKNFNVTESENYLRS------STDDFLIRKGSRHGYCVLVIK 52 (178)
T ss_dssp GGSTTEECCCHHHHHHHHHH------SSCCEEEEECSSTTEEEEEEE
T ss_pred ccCCCcCCCCHHHHHHHHhc------CCCCEEEeecCCCCcEEEEEE
Confidence 46899999999998888777 259999999988777665543
No 139
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=44.78 E-value=55 Score=31.62 Aligned_cols=60 Identities=13% Similarity=0.192 Sum_probs=40.4
Q ss_pred HHHHhhcceeEEecCCCeEEccCCC-cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 168 LEKLCDVVKPAVFTERSYIIQEENP-IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 168 L~~I~~~l~~~~y~kGe~I~rEGDp-~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
|..+--.+....+.+|.+.---=.| ++++.+|++|++++...+ .+|+.. +...+++||+|
T Consensus 318 L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~----~~g~~~-f~~~l~~GDVf 378 (465)
T 3qac_A 318 LRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVN----DQGQSV-FDEELSRGQLV 378 (465)
T ss_dssp HHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEEC----TTSCEE-EEEEEETTCEE
T ss_pred ccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEe----CCCcEE-EEEEecCCeEE
Confidence 3333334455677888766443333 889999999999988776 244532 22679999997
No 140
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=43.79 E-value=24 Score=33.32 Aligned_cols=51 Identities=8% Similarity=0.033 Sum_probs=40.1
Q ss_pred cceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCce
Q 023527 174 VVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDF 231 (281)
Q Consensus 174 ~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDf 231 (281)
.+....+++|..+...--.++++++|++|+..+...+ .++++ . ..+++||+
T Consensus 53 s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~----~~~~~--~-~~l~~GDv 103 (397)
T 2phl_A 53 RLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVK----PDDRR--E-YFFLTSDN 103 (397)
T ss_dssp EEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEE----TTTEE--E-EEEEESSC
T ss_pred EEEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEe----CCCcE--E-EEECCCCc
Confidence 4566788999987766678999999999999988766 24453 2 67999999
No 141
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=43.34 E-value=18 Score=31.67 Aligned_cols=46 Identities=20% Similarity=0.409 Sum_probs=31.0
Q ss_pred eEEecCCCeEEcc-C-CCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 177 PAVFTERSYIIQE-E-NPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 177 ~~~y~kGe~I~rE-G-Dp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
...+++|...-.. . ...+++++|++|++++.. +|++ ..|++||.+=
T Consensus 66 ~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~-------~~~~----~~L~~GD~~~ 113 (274)
T 1sef_A 66 IATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSD-------GQET----HELEAGGYAY 113 (274)
T ss_dssp EEEEEEEEEECSCSSBTTEEEEEEEEESEEEEEC-------SSCE----EEEETTEEEE
T ss_pred EEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEE-------CCEE----EEECCCCEEE
Confidence 3456676654332 1 235789999999999865 3343 5799999874
No 142
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=43.07 E-value=46 Score=25.91 Aligned_cols=50 Identities=16% Similarity=0.072 Sum_probs=30.9
Q ss_pred eEEecCCCeEEccCCC-cCeEEEEEEcEEEEEEeccccccCCCcce-eeeeecCCcee
Q 023527 177 PAVFTERSYIIQEENP-IDQMLFVLQGKLWTYTSRRVTELSSNSGN-LNNHLEGGDFS 232 (281)
Q Consensus 177 ~~~y~kGe~I~rEGDp-~~~myfIl~G~V~v~~~~~~~~~gGr~~~-~~~~L~~GDff 232 (281)
...+.+|..+-..-.+ .+++++|++|++++...+ . .... +...+++||++
T Consensus 47 ~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~-----~-~~~~~~~~~l~~Gd~i 98 (148)
T 2oa2_A 47 LMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGH-----R-QDNLHFQEEVFDDYAI 98 (148)
T ss_dssp EEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEES-----B-TTBCCEEEEEETTCEE
T ss_pred EEEECCCCccCceECCCCcEEEEEEeCEEEEEECC-----c-cccceeeEEECCCCEE
Confidence 3466777655333333 569999999999987654 1 1000 00358999975
No 143
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=41.68 E-value=33 Score=33.17 Aligned_cols=50 Identities=8% Similarity=0.151 Sum_probs=33.3
Q ss_pred EEecCCCeEEccC-CCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 178 AVFTERSYIIQEE-NPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 178 ~~y~kGe~I~rEG-Dp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
..+.+|.+.---= -.++++.+|++|++++...+ .+|+..+. ..+++||+|
T Consensus 328 v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~----~~g~~~f~-~~l~~GDV~ 378 (466)
T 3kgl_A 328 GSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVN----DNGDRVFD-GQVSQGQLL 378 (466)
T ss_dssp EEEETTEEEEEEEESSCCEEEEEEESEEEEEEEC----TTSCEEEE-EEEETTCEE
T ss_pred EEeecCcEeeeeECCCCCEEEEEEeceEEEEEEe----CCCcEEEE-eEecCCcEE
Confidence 3444554433222 23889999999999988776 24553332 789999987
No 144
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=40.93 E-value=37 Score=32.22 Aligned_cols=51 Identities=12% Similarity=0.162 Sum_probs=38.4
Q ss_pred ceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 175 VKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 175 l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
+....+.+|..+.-.--.++++++|++|+..+...+ .+++. . ..+++||++
T Consensus 46 l~~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~----~~~~~--~-~~l~~GDv~ 96 (418)
T 3s7i_A 46 IVQIEAKPNTLVLPKHADADNILVIQQGQATVTVAN----GNNRK--S-FNLDEGHAL 96 (418)
T ss_dssp EEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEEC----SSCEE--E-EEEETTEEE
T ss_pred EEEEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEe----cCCEE--E-EEecCCCEE
Confidence 344567888888777556999999999999987766 13332 2 679999998
No 145
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=39.78 E-value=9.1 Score=28.43 Aligned_cols=52 Identities=12% Similarity=0.066 Sum_probs=34.5
Q ss_pred cceeEEecCCCeEEccCCCcC-eEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 174 VVKPAVFTERSYIIQEENPID-QMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 174 ~l~~~~y~kGe~I~rEGDp~~-~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+++...++||+-+=..-.+.+ ..++|++|++++...+ + .... ..+.+||.+=
T Consensus 18 rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d-----~-~~~~--~~l~~G~~~~ 70 (98)
T 3lag_A 18 RVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD-----G-TRSL--AQLKTGRSYA 70 (98)
T ss_dssp EEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT-----S-CEEC--CCBCTTCCEE
T ss_pred EEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCC-----C-ceEE--EEecCCcEEE
Confidence 345677899998877766655 5777889999876544 3 3211 4578888763
No 146
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=38.30 E-value=86 Score=29.27 Aligned_cols=78 Identities=15% Similarity=0.181 Sum_probs=53.6
Q ss_pred EEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEE
Q 023527 178 AVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQ 257 (281)
Q Consensus 178 ~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~ 257 (281)
..+.+|+..-..-.....+|.|++|+-.+.. ||+. ...++||.|=-- .| ...+..
T Consensus 284 ~~L~pG~~t~~hRht~s~Vy~V~eG~G~~~I-------~~~~----~~w~~gD~fvvP--~w------------~~h~~~ 338 (368)
T 3nw4_A 284 HRLRAGTETATRNEVGSTVFQVFEGAGAVVM-------NGET----TKLEKGDMFVVP--SW------------VPWSLQ 338 (368)
T ss_dssp EEECTTCBCCCEEESSCEEEEEEESCEEEEE-------TTEE----EEECTTCEEEEC--TT------------CCEEEE
T ss_pred EEECCCCccCCeeccccEEEEEEeCcEEEEE-------CCEE----EEecCCCEEEEC--CC------------CcEEEE
Confidence 4556666554444667799999999988655 3342 468999998532 11 235567
Q ss_pred EcccEEEEEEcHHHHHHHHhhhc
Q 023527 258 ALTKVEAFVLMAYDLKQVLLNID 280 (281)
Q Consensus 258 Altdvell~L~~edL~~l~~~f~ 280 (281)
+.+++.+|.++-.-+.+-+.-||
T Consensus 339 n~~~a~Lf~~~D~Pl~~~LGl~r 361 (368)
T 3nw4_A 339 AETQFDLFRFSDAPIMEALSFMR 361 (368)
T ss_dssp ESSSEEEEEEESHHHHHHTTCCC
T ss_pred eCCCEEEEEEeCHHHHHHhCCce
Confidence 88999999998877766555443
No 147
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=38.16 E-value=92 Score=27.42 Aligned_cols=67 Identities=16% Similarity=0.102 Sum_probs=42.1
Q ss_pred EEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceEEE
Q 023527 178 AVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKTIQ 257 (281)
Q Consensus 178 ~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~TV~ 257 (281)
..+++|+.+-.+-++...+.+|++|.+++-..+ ++. ..+.+||...-. .....+++
T Consensus 187 ~~L~~g~~~~~~~~~~~~~l~v~~G~v~v~g~~-----~~~-----~~l~~gd~~~l~--------------~~~~l~l~ 242 (256)
T 2vec_A 187 IVLDKGESANFQLHGPRAYLQSIHGKFHALTHH-----EEK-----AALTCGDGAFIR--------------DEANITLV 242 (256)
T ss_dssp EEECTTCEEEEECSSSEEEEEEEESCEEEEETT-----EEE-----EEECTTCEEEEE--------------SCSEEEEE
T ss_pred EEECCCCEEEEecCCCeEEEEEEECEEEECCcc-----ccc-----eEECCCCEEEEC--------------CCCeEEEE
Confidence 467788877665444336777889999874311 111 347788765321 11346788
Q ss_pred EcccEEEEEEc
Q 023527 258 ALTKVEAFVLM 268 (281)
Q Consensus 258 Altdvell~L~ 268 (281)
|.++++++.++
T Consensus 243 a~~~a~~LL~d 253 (256)
T 2vec_A 243 ADSPLRALLID 253 (256)
T ss_dssp ESSSEEEEEEE
T ss_pred eCCCCEEEEEE
Confidence 88999998875
No 148
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=35.65 E-value=62 Score=27.80 Aligned_cols=64 Identities=13% Similarity=0.182 Sum_probs=44.9
Q ss_pred ceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcce
Q 023527 175 VKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTK 254 (281)
Q Consensus 175 l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~ 254 (281)
....++++|..+-.-..+..+..+|++|.+. + ++ ..+.+||+.=.. +-+..
T Consensus 45 ~~lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~----d-----~~------~~~~~Gd~~~~P--------------~g~~H 95 (223)
T 3o14_A 45 TSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ----D-----EH------GDYPAGTYVRNP--------------PTTSH 95 (223)
T ss_dssp EEEEEECTTEECCCEECTTCEEEEEEEEEEE----E-----TT------EEEETTEEEEEC--------------TTCEE
T ss_pred EEEEEECCCCCcccccCCCCEEEEEEEeEEE----E-----CC------eEECCCeEEEeC--------------CCCcc
Confidence 4567899999998888889999999999975 3 21 358899995321 11223
Q ss_pred EEEEcccEEEEEE
Q 023527 255 TIQALTKVEAFVL 267 (281)
Q Consensus 255 TV~Altdvell~L 267 (281)
+..|.++|.++.-
T Consensus 96 ~p~a~~gc~~~vk 108 (223)
T 3o14_A 96 VPGSAEGCTIFVK 108 (223)
T ss_dssp CCEESSCEEEEEE
T ss_pred ccEeCCCCEEEEE
Confidence 4455677777654
No 149
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=35.02 E-value=63 Score=29.39 Aligned_cols=37 Identities=11% Similarity=0.241 Sum_probs=25.6
Q ss_pred CCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 190 ENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 190 GDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
-...+++++|++|++++...+ .+|+... ..|++||++
T Consensus 68 H~~~~E~~~Vl~G~~~~~v~~----~~g~~~~--~~L~~GD~v 104 (350)
T 1juh_A 68 HQKHYENFYCNKGSFQLWAQS----GNETQQT--RVLSSGDYG 104 (350)
T ss_dssp CSSCEEEEEEEESEEEEEEEE----TTSCCEE--EEEETTCEE
T ss_pred CCCceEEEEEEEEEEEEEECC----cCCceEE--EEECCCCEE
Confidence 334679999999999987644 1232112 579999986
No 150
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=34.96 E-value=53 Score=30.92 Aligned_cols=40 Identities=15% Similarity=-0.015 Sum_probs=26.3
Q ss_pred cCeEEEEEEcEEEEEEeccc--cccCCCcceeeeeecCCceec
Q 023527 193 IDQMLFVLQGKLWTYTSRRV--TELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 193 ~~~myfIl~G~V~v~~~~~~--~~~gGr~~~~~~~L~~GDffG 233 (281)
++++++|++|+.++...++. .+.+|...+. ..+++||+|=
T Consensus 260 A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~-~~l~~GDV~v 301 (397)
T 2phl_A 260 AIVILVVNEGEAHVELVGPKGNKETLEYESYR-AELSKDDVFV 301 (397)
T ss_dssp CEEEEEEEESEEEEEEEEECC--CCSCEEEEE-EEEETTCEEE
T ss_pred CCEEEEEEeeeEEEEEEeccccccCCCceEEE-EEecCCCEEE
Confidence 78999999999997766500 0002222222 7899999983
No 151
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=34.16 E-value=45 Score=29.39 Aligned_cols=30 Identities=23% Similarity=0.483 Sum_probs=23.6
Q ss_pred cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 193 IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 193 ~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
.+++++|++|++++.. +|++ ..+++||++=
T Consensus 239 ~~e~~~vl~G~~~~~i-------~~~~----~~l~~GD~~~ 268 (337)
T 1y3t_A 239 HTETFYCLEGQMTMWT-------DGQE----IQLNPGDFLH 268 (337)
T ss_dssp CEEEEEEEESCEEEEE-------TTEE----EEECTTCEEE
T ss_pred CcEEEEEEeCEEEEEE-------CCEE----EEECCCCEEE
Confidence 6799999999999765 3343 5799999874
No 152
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=34.00 E-value=1e+02 Score=29.83 Aligned_cols=45 Identities=20% Similarity=0.149 Sum_probs=35.6
Q ss_pred HHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEec
Q 023527 166 SSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSR 210 (281)
Q Consensus 166 ~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~ 210 (281)
++|+.+--.+....+++|..+.--=.++.++++|++|+..+....
T Consensus 38 ~~l~~~gv~~~r~~i~pggl~~Ph~~~~~~i~yV~~G~g~vg~v~ 82 (493)
T 2d5f_A 38 PELQCAGVTVSKRTLNRNGLHLPSYSPYPQMIIVVQGKGAIGFAF 82 (493)
T ss_dssp HHHHHHTCEEEEEEECTTEEEEEEECSSCEEEEEEECEEEEEECC
T ss_pred hhhccCCEEEEEEEeCCCcEeCceecCCCeEEEEEeCEEEEEEEe
Confidence 456666556777899999998666667899999999999877654
No 153
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=32.37 E-value=1.1e+02 Score=29.60 Aligned_cols=45 Identities=9% Similarity=0.046 Sum_probs=34.8
Q ss_pred HHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEec
Q 023527 166 SSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSR 210 (281)
Q Consensus 166 ~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~ 210 (281)
+++...--.+....+.+|..+.--=..++++++|++|+..+....
T Consensus 43 ~~l~~~gvs~~R~~i~P~gl~~Ph~h~a~ei~yV~qG~g~~g~v~ 87 (465)
T 3qac_A 43 QEFRCAGVSVIRRTIEPHGLLLPSFTSAPELIYIEQGNGITGMMI 87 (465)
T ss_dssp HHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEEC
T ss_pred hhhcccceEEEEEEEcCCcCcccEEcCCCEEEEEEECcEEEEEec
Confidence 456655555566788998888777779999999999999876554
No 154
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=31.05 E-value=97 Score=30.10 Aligned_cols=45 Identities=11% Similarity=0.003 Sum_probs=35.1
Q ss_pred HHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEec
Q 023527 166 SSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSR 210 (281)
Q Consensus 166 ~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~ 210 (281)
+.|..+--.+....+++|..+.-.=..+.++++|++|+..+-...
T Consensus 39 ~~L~~~gvs~~R~~i~pggl~lPh~~~A~ei~~V~qG~g~~G~v~ 83 (496)
T 3ksc_A 39 KQFRCAGVALSRATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVF 83 (496)
T ss_dssp HHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEEC
T ss_pred hhhccCCceEEEEEecCCCEeCceEcCCCEEEEEEeCceEEEEEe
Confidence 466666566677889999987655558999999999999876654
No 155
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=29.24 E-value=1.1e+02 Score=28.82 Aligned_cols=64 Identities=13% Similarity=0.087 Sum_probs=42.0
Q ss_pred HHHHHHhhcceeEEecCCCeEEccCC-CcCeEEEEEEcEEEEEEeccccccCCC-----------c-ceeeeeecCCcee
Q 023527 166 SSLEKLCDVVKPAVFTERSYIIQEEN-PIDQMLFVLQGKLWTYTSRRVTELSSN-----------S-GNLNNHLEGGDFS 232 (281)
Q Consensus 166 ~~L~~I~~~l~~~~y~kGe~I~rEGD-p~~~myfIl~G~V~v~~~~~~~~~gGr-----------~-~~~~~~L~~GDff 232 (281)
..|..+--.+....+.+|.+..--=. .++++++|++|+.++...+ .+|. . ..+...+++||+|
T Consensus 242 P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~----~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~ 317 (416)
T 1uij_A 242 PQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVG----IKEQQQKQKQEEEPLEVQRYRAELSEDDVF 317 (416)
T ss_dssp HHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEE----EC------------CCEEEEEEEEETTCEE
T ss_pred ccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEc----CCCccccccccccccceEEEEEEecCCcEE
Confidence 34555544556778888887654333 3889999999999977655 1331 1 1222589999997
Q ss_pred c
Q 023527 233 G 233 (281)
Q Consensus 233 G 233 (281)
=
T Consensus 318 v 318 (416)
T 1uij_A 318 V 318 (416)
T ss_dssp E
T ss_pred E
Confidence 3
No 156
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=28.46 E-value=2e+02 Score=25.91 Aligned_cols=69 Identities=13% Similarity=-0.012 Sum_probs=51.8
Q ss_pred eeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCceechhhHHHhhcCCCCCCCCCcceE
Q 023527 176 KPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFSGEELIAWAKAGHNSSNLPISTKT 255 (281)
Q Consensus 176 ~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffGE~lL~w~l~~~s~~~~p~s~~T 255 (281)
....|.+|+.+..+.+. +..+-+++|+..+.. +|++ ..|++||..= -+ +....+
T Consensus 210 eV~l~G~Ges~~~~~~~-d~wiWqLEGss~Vt~-------~~q~----~~L~~~DsLL--------Ip------a~~~y~ 263 (286)
T 2qnk_A 210 QVIAYGQGSSEGLRQNV-DVWLWQLEGSSVVTM-------GGRR----LSLAPDDSLL--------VL------AGTSYA 263 (286)
T ss_dssp EEEEECSEEEEECCCSS-CEEEEEEESCEEEEE-------TTEE----EEECTTEEEE--------EC------TTCCEE
T ss_pred EEEEEcCCccccccCcC-cEEEEEEcCceEEEE-------CCeE----EeccCCCEEE--------ec------CCCeEE
Confidence 34559999999999999 999999999986443 3343 5699999842 11 134578
Q ss_pred EEEcccEEEEEEcHH
Q 023527 256 IQALTKVEAFVLMAY 270 (281)
Q Consensus 256 V~Altdvell~L~~e 270 (281)
..+.++|.++.+..+
T Consensus 264 ~~r~~gsv~L~I~~~ 278 (286)
T 2qnk_A 264 WERTQGSVALSVTQD 278 (286)
T ss_dssp EEECTTCEEEEEEEC
T ss_pred EEecCCeEEEEEEEC
Confidence 999999999987643
No 157
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=27.43 E-value=82 Score=25.91 Aligned_cols=50 Identities=12% Similarity=0.016 Sum_probs=31.5
Q ss_pred eEEecCCCeEE-------ccCC--CcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 177 PAVFTERSYII-------QEEN--PIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 177 ~~~y~kGe~I~-------rEGD--p~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
...+.+|...- +.-. ..+++++|++|++.+...+ ..|+... ..+++||++
T Consensus 71 ~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~----~~g~~~~--~~l~~GD~v 129 (190)
T 1x82_A 71 TTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQT----PEGDAKW--ISMEPGTVV 129 (190)
T ss_dssp EEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEEC----TTCCEEE--EEECTTCEE
T ss_pred EEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcC----cCCcEEE--EEECCCcEE
Confidence 34678887621 1111 2369999999999987655 1232111 579999987
No 158
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=25.56 E-value=1.6e+02 Score=28.58 Aligned_cols=51 Identities=12% Similarity=0.031 Sum_probs=38.6
Q ss_pred CCCCCCHHHHHHHhhcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEec
Q 023527 159 EFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSR 210 (281)
Q Consensus 159 lF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~ 210 (281)
+|..=+ ++|+.+--.+....+++|..+.-.=.++.++++|++|+..+...+
T Consensus 35 ~~~~~~-~~l~~~gvs~~r~~i~p~gl~lPh~~~a~~~~yV~~G~g~~g~v~ 85 (510)
T 3c3v_A 35 TWNPNN-QEFECAGVALSRLVLRRNALRRPFYSNAPQEIFIQQGRGYFGLIF 85 (510)
T ss_dssp ECCTTS-HHHHHHTCEEEEEEECTTEEEEEEECSSCEEEEEEECCEEEEEEC
T ss_pred EeCCCC-cccccCcEEEEEEEECCCCCccceecCCCeEEEEEeCEEEEEEEe
Confidence 344433 456655556677889999988777778999999999999877665
No 159
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=23.63 E-value=75 Score=24.22 Aligned_cols=32 Identities=9% Similarity=-0.050 Sum_probs=21.5
Q ss_pred CCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 190 ENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 190 GDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
+.+.-.+.+|++|+.+....+ ++ ..+++||++
T Consensus 35 ~h~~~~i~~v~~G~~~~~i~~-------~~----~~l~~Gd~~ 66 (164)
T 2arc_A 35 GMKGYILNLTIRGQGVVKNQG-------RE----FVCRPGDIL 66 (164)
T ss_dssp CCSSEEEEEEEEECEEEEETT-------EE----EEECTTCEE
T ss_pred CCCceEEEEEEEeEEEEEECC-------EE----EEecCCeEE
Confidence 445556889999998876522 32 457777765
No 160
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=23.62 E-value=2.5e+02 Score=23.89 Aligned_cols=44 Identities=14% Similarity=0.154 Sum_probs=32.9
Q ss_pred hcceeEEecCCCeEEccCCCcCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 173 DVVKPAVFTERSYIIQEENPIDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 173 ~~l~~~~y~kGe~I~rEGDp~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
++....++++|+.+-....-..+ .||++|.+. + ++ ..+.+|++.
T Consensus 146 E~v~l~r~~~G~~~~~~~hgG~E-ilVL~G~~~----d-----~~------~~~~~GsWl 189 (223)
T 3o14_A 146 ETVTHRKLEPGANLTSEAAGGIE-VLVLDGDVT----V-----ND------EVLGRNAWL 189 (223)
T ss_dssp CEEEEEEECTTCEEEECCSSCEE-EEEEEEEEE----E-----TT------EEECTTEEE
T ss_pred cEEEEEEECCCCccCCCCCCcEE-EEEEEeEEE----E-----CC------ceECCCeEE
Confidence 45667889999999988875555 599999976 3 32 348899884
No 161
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=23.58 E-value=1.2e+02 Score=25.61 Aligned_cols=34 Identities=15% Similarity=0.208 Sum_probs=23.8
Q ss_pred cCeEEEEEEcEEEEEEeccccccCCCcceeeeeecCCcee
Q 023527 193 IDQMLFVLQGKLWTYTSRRVTELSSNSGNLNNHLEGGDFS 232 (281)
Q Consensus 193 ~~~myfIl~G~V~v~~~~~~~~~gGr~~~~~~~L~~GDff 232 (281)
-+++++|++|+......+ .+|+..- ..+++||++
T Consensus 104 ~~Ei~yVleG~G~f~i~d----~~d~~~~--i~v~~GDlI 137 (191)
T 1vr3_A 104 DEEIRYILEGSGYFDVRD----KEDKWIR--ISMEKGDMI 137 (191)
T ss_dssp SCEEEEEEEEEEEEEEEC----TTSCEEE--EEEETTEEE
T ss_pred cceEEEEEeceEEEEECC----CCCeEEE--EEECCCCEE
Confidence 478999999999987655 1133111 368999997
No 162
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=23.52 E-value=43 Score=27.60 Aligned_cols=35 Identities=11% Similarity=-0.052 Sum_probs=24.8
Q ss_pred ccCCCcCeEEEEEE--cEEEEEEeccccccCCCcceeeeeecCCceec
Q 023527 188 QEENPIDQMLFVLQ--GKLWTYTSRRVTELSSNSGNLNNHLEGGDFSG 233 (281)
Q Consensus 188 rEGDp~~~myfIl~--G~V~v~~~~~~~~~gGr~~~~~~~L~~GDffG 233 (281)
+.-+..+++|+|++ |+.++.. +|+. ..+++||++=
T Consensus 61 H~H~~~~E~~yVLe~~G~g~v~i-------dge~----~~l~~GD~v~ 97 (157)
T 4h7l_A 61 HYHREHQEIYVVLDHAAHATIEL-------NGQS----YPLTKLLAIS 97 (157)
T ss_dssp BBCSSCEEEEEEEEECTTCEEEE-------TTEE----EECCTTEEEE
T ss_pred eECCCCcEEEEEEecCcEEEEEE-------CCEE----EEeCCCCEEE
Confidence 33344568999999 9988765 3343 5689999863
No 163
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=21.02 E-value=1.3e+02 Score=28.38 Aligned_cols=64 Identities=13% Similarity=0.098 Sum_probs=42.2
Q ss_pred HHHHHHhhcceeEEecCCCeEEccCCC-cCeEEEEEEcEEEEEEeccccccCC----------Cc-ceeeeeecCCceec
Q 023527 166 SSLEKLCDVVKPAVFTERSYIIQEENP-IDQMLFVLQGKLWTYTSRRVTELSS----------NS-GNLNNHLEGGDFSG 233 (281)
Q Consensus 166 ~~L~~I~~~l~~~~y~kGe~I~rEGDp-~~~myfIl~G~V~v~~~~~~~~~gG----------r~-~~~~~~L~~GDffG 233 (281)
..|..+--.+....+.+|.+..--=.| ++++++|++|+.++...+ .+| +. ..+...+++||+|=
T Consensus 259 P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~----~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~v 334 (434)
T 2ea7_A 259 PQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVG----LSDQQQQKQQEESLEVQRYRAELSEDDVFV 334 (434)
T ss_dssp HHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEE----EEECCCCTTSCCCEEEEEEEEEECTTCEEE
T ss_pred ccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEe----cCccccccccccCcceEEEEEEecCCcEEE
Confidence 345555555667788999876543333 789999999999977655 122 11 12225799999973
No 164
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=20.44 E-value=40 Score=29.39 Aligned_cols=31 Identities=10% Similarity=0.109 Sum_probs=20.3
Q ss_pred EEecCCCeEE-ccCCCcCeEEEEEEcEEEEEE
Q 023527 178 AVFTERSYII-QEENPIDQMLFVLQGKLWTYT 208 (281)
Q Consensus 178 ~~y~kGe~I~-rEGDp~~~myfIl~G~V~v~~ 208 (281)
..+++|...- +--...+++++|++|++++..
T Consensus 48 ~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v 79 (239)
T 2xlg_A 48 AQIPPGGGPMPHIHYFINEWFWTPEGGIELFH 79 (239)
T ss_dssp EEECTTCSCCSEEESSEEEEEEETTCCCEEEE
T ss_pred EEECCCCcCCCeECCCccEEEEEEEeEEEEEE
Confidence 3456665332 122336789999999999866
No 165
>3or8_A Transcription elongation factor SPT6; SH2, CTD binding; HET: MES; 1.60A {Candida glabrata} PDB: 3pjp_A* 3psj_A* 3psk_A 2l3t_A 3gxw_A 3gxx_A
Probab=20.22 E-value=1.3e+02 Score=25.61 Aligned_cols=39 Identities=10% Similarity=0.163 Sum_probs=31.2
Q ss_pred cCCCCCCCCHHHHHHHhhcceeEEecCCCeEEccCCC-cCeEEEE
Q 023527 156 LVEEFGNLDGSSLEKLCDVVKPAVFTERSYIIQEENP-IDQMLFV 199 (281)
Q Consensus 156 ~vplF~~L~e~~L~~I~~~l~~~~y~kGe~I~rEGDp-~~~myfI 199 (281)
+.|+|.+++-.+.++.++. -..||+|+|+-.. .+++.+.
T Consensus 7 ~HP~F~n~~~~qAe~~L~~-----~~~Ge~iIRPSSkg~dhLtvT 46 (197)
T 3or8_A 7 NHPYYFPFNGKQAEDYLRS-----KERGDFVIRQSSRGDDHLAIT 46 (197)
T ss_dssp CCTTEECCCHHHHHHHHTT-----SCTTCEEEEECSSCTTEEEEE
T ss_pred CCCCcCCCCHHHHHHHHhc-----CCCCCEEEeeCCCCCCcEEEE
Confidence 6899999999988888765 2689999999887 4555543
Done!