BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023529
MKRYRNGEIWDFETAEESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAA
GCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLSG
YGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVV
VSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWD
IGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSFMNAR

High Scoring Gene Products

Symbol, full name Information P value
AT1G30540 protein from Arabidopsis thaliana 1.4e-95
DDB_G0284433
N-acetyl-D-glucosamine kinase
gene from Dictyostelium discoideum 5.5e-32

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023529
        (281 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2028135 - symbol:AT1G30540 species:3702 "Arabi...   618  1.4e-95   2
DICTYBASE|DDB_G0284433 - symbol:DDB_G0284433 "N-acetyl-D-...   252  5.5e-32   2


>TAIR|locus:2028135 [details] [associations]
            symbol:AT1G30540 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0016887 "ATPase activity"
            evidence=ISS] Pfam:PF01869 EMBL:CP002684 InterPro:IPR002731
            EMBL:AY084324 EMBL:BT006432 EMBL:AK227991 IPI:IPI00545277
            RefSeq:NP_564358.1 UniGene:At.27951 ProteinModelPortal:Q8LGE0
            PRIDE:Q8LGE0 DNASU:839934 EnsemblPlants:AT1G30540.1 GeneID:839934
            KEGG:ath:AT1G30540 TAIR:At1g30540 InParanoid:Q8LGE0 OMA:SGVNHPS
            PhylomeDB:Q8LGE0 ProtClustDB:CLSN2688113 Genevestigator:Q8LGE0
            Uniprot:Q8LGE0
        Length = 351

 Score = 618 (222.6 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
 Identities = 125/165 (75%), Positives = 141/165 (85%)

Query:   116 NWLSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAA 175
             +W SGYGIAAQALTAVIRA+DGRGP TMLTS IL  L LSSPDELIGWTY DPSWARIAA
Sbjct:   188 DWGSGYGIAAQALTAVIRAHDGRGPQTMLTSTILKALGLSSPDELIGWTYADPSWARIAA 247

Query:   176 LVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEA 235
             LVP VVSCAEAGDE+++KIL D+ E+LALSVKAVVQRL L G+DG  SFP+VMVGGVL A
Sbjct:   248 LVPQVVSCAEAGDEISDKILVDAAEDLALSVKAVVQRLGLCGKDGTASFPVVMVGGVLNA 307

Query:   236 NRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSFMNA 280
             N++WDIG+EV K I R +PGA  I PKVEPAVGAALLA N F+++
Sbjct:   308 NQKWDIGKEVSKRINRYFPGAQTIIPKVEPAVGAALLAMN-FLSS 351

 Score = 352 (129.0 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
 Identities = 64/107 (59%), Positives = 85/107 (79%)

Query:    13 ETAEESGG-REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGED 71
             E  EE+G    VILGLDGG TSTVC+C+P  S  +  PDPLP+L RA AGC+N NSVGE 
Sbjct:    20 EATEENGFVNGVILGLDGGATSTVCVCVPFFSFGERFPDPLPILGRAVAGCTNRNSVGET 79

Query:    72 AARETIEKVMADALLKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWL 118
             AAR+++E+V+++AL++SG ++S VR VCL VSGVNHP+DQ++I NW+
Sbjct:    80 AARDSLEQVISEALVQSGFDKSDVRGVCLGVSGVNHPSDQEKIENWI 126


>DICTYBASE|DDB_G0284433 [details] [associations]
            symbol:DDB_G0284433 "N-acetyl-D-glucosamine kinase"
            species:44689 "Dictyostelium discoideum" [GO:0045127
            "N-acetylglucosamine kinase activity" evidence=IEA] [GO:0016740
            "transferase activity" evidence=IEA] [GO:0016310 "phosphorylation"
            evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] dictyBase:DDB_G0284433 Pfam:PF01869
            GO:GO:0005524 GenomeReviews:CM000153_GR EMBL:AAFI02000064
            InterPro:IPR002731 eggNOG:COG2971 GO:GO:0045127 RefSeq:XP_638627.1
            STRING:Q54PM7 GeneID:8624598 KEGG:ddi:DDB_G0284433
            ProtClustDB:CLSZ2430276 Uniprot:Q54PM7
        Length = 319

 Score = 252 (93.8 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
 Identities = 62/161 (38%), Positives = 91/161 (56%)

Query:   119 SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDP---SWARIAA 175
             SGY I    L  V++A D  GP T LT  +L  L+L+  ++LI W Y DP   SW + A 
Sbjct:   163 SGYQIGYDILRHVLKAKDQVGPKTSLTQVLLEKLQLTKEEDLISWAY-DPKTQSWQKFAQ 221

Query:   176 LVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEA 235
             L P+    A+ GDE++N IL D+   L   + +V+++L L  E+    FPLV  GG +E 
Sbjct:   222 LSPLAFEQAQLGDEISNLILVDAANALYDLINSVIKKLGLDKEE---KFPLVYTGGNIE- 277

Query:   236 NRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNS 276
              R+  +   + K I+ +YP A  +    +P++GAALLA NS
Sbjct:   278 -RKGILSDLLSKKIMENYPNAEILNTTCDPSMGAALLALNS 317

 Score = 114 (45.2 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
 Identities = 32/106 (30%), Positives = 55/106 (51%)

Query:    21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKV 80
             +E+ +G+DGG T T  + +      DS    L   AR  + CSN++SVGED A+  I + 
Sbjct:     3 KEIFIGIDGGGTKTSTVAV------DSNGQEL---ARHTSPCSNYHSVGEDLAKAAINEG 53

Query:    81 MADALLK------SGSNRSA-VRAVCLAVSGVNHPTDQQRILNWLS 119
             +   + K         N+   V ++CL +SGV+   D+  + +W++
Sbjct:    54 IKYVIRKVKETITDDDNKEVTVGSICLGMSGVDREKDKLLVKSWVT 99


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      281       281   0.00083  115 3  11 22  0.38    34
                                                     33  0.42    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  206 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.62u 0.33s 21.95t   Elapsed:  00:00:01
  Total cpu time:  21.62u 0.33s 21.95t   Elapsed:  00:00:01
  Start:  Fri May 10 06:47:21 2013   End:  Fri May 10 06:47:22 2013

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