Query 023529
Match_columns 281
No_of_seqs 121 out of 1289
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 08:22:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023529.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023529hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zc6_A Probable N-acetylglucos 100.0 1.9E-27 6.3E-32 215.2 24.0 227 22-280 11-298 (305)
2 2ch5_A NAGK protein; transfera 100.0 2.9E-26 1E-30 210.3 26.7 240 20-278 4-327 (347)
3 2e2o_A Hexokinase; acetate and 99.9 4.9E-24 1.7E-28 191.9 28.2 226 20-276 1-288 (299)
4 2qm1_A Glucokinase; alpha-beta 99.9 2.4E-24 8.1E-29 195.8 13.7 229 20-277 4-323 (326)
5 1zbs_A Hypothetical protein PG 99.9 6.9E-23 2.4E-27 184.1 20.8 217 23-277 1-282 (291)
6 3vgl_A Glucokinase; ROK family 99.9 4.8E-24 1.6E-28 194.2 11.5 221 22-278 2-315 (321)
7 3vov_A Glucokinase, hexokinase 99.9 5.8E-23 2E-27 185.7 13.5 219 23-278 2-298 (302)
8 1z05_A Transcriptional regulat 99.9 1.1E-22 3.8E-27 192.1 13.8 232 21-278 107-418 (429)
9 4db3_A Glcnac kinase, N-acetyl 99.9 1.2E-22 4.1E-27 185.5 12.0 220 23-275 25-326 (327)
10 4htl_A Beta-glucoside kinase; 99.9 3.3E-22 1.1E-26 180.2 14.7 213 23-278 5-294 (297)
11 1zxo_A Conserved hypothetical 99.9 9.5E-24 3.2E-28 189.7 3.9 215 23-277 1-280 (291)
12 2hoe_A N-acetylglucosamine kin 99.9 7.1E-22 2.4E-26 183.9 13.0 220 21-278 86-374 (380)
13 2yhw_A Bifunctional UDP-N-acet 99.9 1.9E-21 6.5E-26 178.3 15.5 224 21-278 29-341 (343)
14 2ap1_A Putative regulator prot 99.9 4.8E-22 1.7E-26 181.0 10.8 216 22-275 24-326 (327)
15 3r8e_A Hypothetical sugar kina 99.9 2.1E-22 7.1E-27 183.4 8.3 234 16-276 13-320 (321)
16 1z6r_A MLC protein; transcript 99.9 7.9E-22 2.7E-26 184.9 12.5 229 20-273 83-391 (406)
17 2aa4_A Mannac kinase, putative 99.8 1.6E-21 5.6E-26 174.4 9.1 217 23-275 2-288 (289)
18 3htv_A D-allose kinase, alloki 99.8 9.3E-21 3.2E-25 171.9 14.1 217 21-279 6-303 (310)
19 2gup_A ROK family protein; sug 99.8 6.4E-20 2.2E-24 164.3 10.0 217 23-277 5-289 (292)
20 1sz2_A Glucokinase, glucose ki 99.8 2.5E-19 8.5E-24 163.7 8.9 95 176-279 225-330 (332)
21 3epq_A Putative fructokinase; 99.8 1.6E-18 5.6E-23 156.6 10.9 200 22-279 3-293 (302)
22 1saz_A Probable butyrate kinas 99.7 1E-16 3.6E-21 149.2 12.3 229 22-275 2-348 (381)
23 2q2r_A Glucokinase 1, putative 99.7 8.3E-18 2.8E-22 155.9 1.8 90 176-276 266-372 (373)
24 3mcp_A Glucokinase; structural 99.6 5.1E-16 1.7E-20 143.7 8.7 200 21-253 8-287 (366)
25 1bdg_A Hexokinase; phosphotran 99.6 7.8E-14 2.7E-18 132.3 18.9 89 177-275 342-446 (451)
26 1woq_A Inorganic polyphosphate 99.4 1.6E-13 5.6E-18 121.3 7.9 212 22-278 12-264 (267)
27 1cza_N Hexokinase type I; stru 99.4 3.4E-12 1.2E-16 130.6 17.6 86 179-274 354-458 (917)
28 2yhx_A Hexokinase B; transfera 99.4 4.3E-11 1.5E-15 113.5 20.8 89 177-274 334-441 (457)
29 1cza_N Hexokinase type I; stru 99.3 1.3E-11 4.4E-16 126.3 16.4 95 179-275 802-907 (917)
30 3lm2_A Putative kinase; struct 99.3 7.7E-14 2.6E-18 120.8 -5.2 45 196-250 164-208 (226)
31 3o8m_A Hexokinase; rnaseh-like 99.1 4.4E-09 1.5E-13 100.2 18.5 75 190-274 383-468 (485)
32 1hux_A Activator of (R)-2-hydr 99.0 5.3E-09 1.8E-13 92.6 13.2 220 22-278 3-259 (270)
33 4ehu_A Activator of 2-hydroxyi 98.8 3.6E-07 1.2E-11 80.5 18.9 60 23-99 2-61 (276)
34 4e1j_A Glycerol kinase; struct 98.6 1.2E-07 4.1E-12 91.3 9.6 76 20-104 24-105 (520)
35 2zf5_O Glycerol kinase; hypert 98.6 1.4E-07 4.7E-12 90.3 9.6 76 20-104 1-82 (497)
36 3g25_A Glycerol kinase; IDP007 98.6 1.6E-07 5.3E-12 90.1 9.8 76 20-104 4-85 (501)
37 3ifr_A Carbohydrate kinase, FG 98.6 8.9E-08 3E-12 92.0 7.9 76 20-104 5-86 (508)
38 2w40_A Glycerol kinase, putati 98.6 1.2E-07 4.1E-12 90.9 8.4 76 20-104 2-85 (503)
39 2p3r_A Glycerol kinase; glycer 98.5 3.3E-07 1.1E-11 88.0 9.7 75 21-104 2-82 (510)
40 2dpn_A Glycerol kinase; thermu 98.5 3.6E-07 1.2E-11 87.4 9.2 74 22-104 2-81 (495)
41 3hz6_A Xylulokinase; xylulose, 98.5 4.8E-07 1.6E-11 86.9 10.1 76 20-105 3-84 (511)
42 3h3n_X Glycerol kinase; ATP-bi 98.5 5.1E-07 1.7E-11 86.6 10.0 75 21-104 4-84 (506)
43 3f9m_A Glucokinase; hexokinase 98.4 2.1E-05 7E-10 74.5 20.0 83 190-274 375-459 (470)
44 2d4w_A Glycerol kinase; alpha 98.4 8.8E-07 3E-11 84.9 9.6 74 22-104 2-81 (504)
45 3ezw_A Glycerol kinase; glycer 98.4 8.6E-07 2.9E-11 85.5 9.4 76 20-104 2-83 (526)
46 3hm8_A Hexokinase-3; glucose, 98.3 4.9E-05 1.7E-09 71.4 20.0 83 190-274 351-435 (445)
47 3l0q_A Xylulose kinase; xlylul 98.3 1.2E-06 4.1E-11 85.0 8.8 73 21-102 4-82 (554)
48 3ll3_A Gluconate kinase; xylul 98.2 3.2E-06 1.1E-10 81.0 9.7 73 21-105 3-81 (504)
49 3jvp_A Ribulokinase; PSI-II, N 98.2 2E-06 7E-11 83.7 8.1 76 21-104 4-96 (572)
50 4ijn_A Acetate kinase, acetoki 98.2 0.00024 8.3E-09 65.5 20.3 86 156-250 262-349 (398)
51 2itm_A Xylulose kinase, xylulo 98.2 3.8E-06 1.3E-10 80.0 8.4 71 23-104 1-77 (484)
52 3h6e_A Carbohydrate kinase, FG 98.1 4.7E-06 1.6E-10 79.5 6.9 70 20-104 4-78 (482)
53 3i8b_A Xylulose kinase; strain 97.9 2.3E-05 8E-10 75.3 8.7 71 21-104 4-74 (515)
54 3h1q_A Ethanolamine utilizatio 97.8 0.00073 2.5E-08 58.7 15.5 75 21-107 27-104 (272)
55 2uyt_A Rhamnulokinase; rhamnos 97.8 2.1E-05 7E-10 74.9 5.6 68 22-102 4-81 (489)
56 3djc_A Type III pantothenate k 97.5 0.00018 6.2E-09 63.3 7.5 67 23-106 3-69 (266)
57 4bc3_A Xylulose kinase; transf 97.5 0.00014 4.6E-09 70.2 6.7 75 21-104 9-100 (538)
58 3r9p_A ACKA; ssgcid, seattle s 97.5 0.012 4E-07 54.1 18.6 86 156-250 253-340 (391)
59 2ivn_A O-sialoglycoprotein end 97.2 0.069 2.4E-06 48.0 20.9 73 23-106 2-79 (330)
60 2e1z_A Propionate kinase; TDCD 97.1 0.074 2.5E-06 49.2 20.0 86 156-250 268-356 (415)
61 3eno_A Putative O-sialoglycopr 96.9 0.24 8.3E-06 44.5 24.3 228 22-273 6-301 (334)
62 3bex_A Type III pantothenate k 96.8 0.0023 7.8E-08 55.6 6.6 67 20-105 1-67 (249)
63 2h3g_X Biosynthetic protein; p 95.6 0.032 1.1E-06 48.9 7.8 65 24-104 2-66 (268)
64 3sk3_A Acetate kinase, acetoki 95.5 0.046 1.6E-06 50.7 8.6 86 156-250 277-365 (415)
65 3zyy_X Iron-sulfur cluster bin 95.4 0.03 1E-06 54.7 7.5 75 192-275 507-584 (631)
66 2iir_A Acetate kinase; transfe 94.8 0.1 3.5E-06 48.2 8.8 86 156-250 259-348 (403)
67 3khy_A Propionate kinase; csgi 94.5 0.17 5.9E-06 46.3 9.3 86 156-250 252-339 (384)
68 1g99_A Acetate kinase; alpha/b 94.4 0.085 2.9E-06 48.8 7.3 86 156-250 260-348 (408)
69 4a2a_A Cell division protein F 94.2 0.14 4.9E-06 47.5 8.4 75 21-105 7-86 (419)
70 3r6m_A YEAZ, resuscitation pro 94.0 0.22 7.5E-06 42.0 8.4 66 23-107 3-68 (213)
71 4h0o_A Acetate kinase; askha ( 94.0 0.22 7.6E-06 45.8 8.9 86 156-250 261-352 (404)
72 1nbw_A Glycerol dehydratase re 93.6 0.1 3.6E-06 50.0 6.3 64 21-94 1-66 (607)
73 2gel_A Putative GRAM negative 92.1 0.59 2E-05 39.7 8.5 66 23-107 2-67 (231)
74 3vth_A Hydrogenase maturation 91.6 1 3.5E-05 45.0 10.6 89 178-279 654-751 (761)
75 2i7n_A Pantothenate kinase 1; 91.3 0.67 2.3E-05 42.1 8.3 76 189-274 280-359 (360)
76 3en9_A Glycoprotease, O-sialog 91.2 10 0.00035 35.9 24.9 208 22-252 6-275 (540)
77 2d0o_A DIOL dehydratase-reacti 90.7 0.52 1.8E-05 45.2 7.2 68 21-97 1-70 (610)
78 2a6a_A Hypothetical protein TM 90.6 0.72 2.5E-05 38.9 7.4 67 22-107 12-78 (218)
79 2ews_A Pantothenate kinase; PA 90.0 0.99 3.4E-05 39.7 8.0 73 189-273 211-286 (287)
80 2ych_A Competence protein PILM 89.1 0.44 1.5E-05 42.9 5.3 66 22-104 13-85 (377)
81 3t69_A Putative 2-dehydro-3-de 88.6 1.7 5.9E-05 38.9 8.6 34 19-61 4-37 (330)
82 2ews_A Pantothenate kinase; PA 86.0 0.53 1.8E-05 41.5 3.6 27 21-57 19-45 (287)
83 4g9i_A Hydrogenase maturation 85.5 1.5 5.2E-05 43.8 7.1 76 190-278 681-762 (772)
84 3nuw_A 2-OXO-3-deoxygalactonat 85.4 1.6 5.6E-05 38.4 6.5 32 20-61 4-35 (295)
85 1vhx_A Putative holliday junct 84.8 0.99 3.4E-05 35.7 4.4 61 22-103 3-64 (150)
86 1nu0_A Hypothetical protein YQ 83.9 1.5 5.2E-05 34.2 5.0 22 20-41 1-22 (138)
87 3cet_A Conserved archaeal prot 81.6 1 3.5E-05 40.4 3.6 71 189-277 250-326 (334)
88 4h0p_A Acetate kinase; askha ( 80.8 1.2 4E-05 41.4 3.7 72 177-251 302-379 (438)
89 3ttc_A HYPF, transcriptional r 79.4 5 0.00017 39.3 7.9 72 190-276 575-652 (657)
90 4gni_A Putative heat shock pro 78.9 1 3.4E-05 41.1 2.7 25 16-40 7-31 (409)
91 3g25_A Glycerol kinase; IDP007 78.6 6.8 0.00023 36.8 8.5 74 190-275 378-451 (501)
92 3ezw_A Glycerol kinase; glycer 78.3 5.7 0.0002 37.6 7.9 73 190-274 376-448 (526)
93 3qfu_A 78 kDa glucose-regulate 77.9 5.3 0.00018 35.7 7.3 45 223-274 344-391 (394)
94 2p3r_A Glycerol kinase; glycer 77.7 7.4 0.00025 36.6 8.5 74 190-275 375-448 (510)
95 2dpn_A Glycerol kinase; thermu 77.2 8.1 0.00028 36.2 8.5 74 191-276 373-446 (495)
96 4ep4_A Crossover junction endo 76.7 13 0.00046 29.6 8.5 56 23-89 2-63 (166)
97 2w40_A Glycerol kinase, putati 76.4 8.8 0.0003 36.0 8.6 75 190-276 380-455 (503)
98 2d4w_A Glycerol kinase; alpha 76.0 10 0.00035 35.5 8.9 75 190-276 377-451 (504)
99 1hjr_A Holliday junction resol 75.9 8.3 0.00028 30.6 7.0 56 23-90 2-60 (158)
100 3h3n_X Glycerol kinase; ATP-bi 75.1 8.5 0.00029 36.2 8.1 74 190-275 377-450 (506)
101 1iv0_A Hypothetical protein; r 75.0 5.4 0.00018 29.0 5.2 56 24-103 3-60 (98)
102 3i8b_A Xylulose kinase; strain 74.8 11 0.00039 35.5 8.9 74 191-277 400-473 (515)
103 3ifr_A Carbohydrate kinase, FG 72.3 15 0.0005 34.6 9.0 73 190-275 375-447 (508)
104 2fxu_A Alpha-actin-1, actin, a 71.5 11 0.00036 33.8 7.6 48 224-274 295-348 (375)
105 2zf5_O Glycerol kinase; hypert 71.5 9.2 0.00032 35.8 7.4 73 194-276 369-441 (497)
106 4e1j_A Glycerol kinase; struct 71.4 14 0.00048 34.8 8.6 73 190-275 397-472 (520)
107 3i33_A Heat shock-related 70 k 71.1 8.1 0.00028 34.7 6.7 46 223-275 352-400 (404)
108 3bzc_A TEX; helix-turn-helix, 71.1 21 0.00072 35.7 10.0 64 22-102 329-393 (785)
109 2itm_A Xylulose kinase, xylulo 68.5 17 0.00057 33.8 8.4 73 195-276 362-435 (484)
110 3ll3_A Gluconate kinase; xylul 68.1 17 0.00057 34.2 8.3 48 222-275 393-440 (504)
111 1dkg_D Molecular chaperone DNA 66.7 9.4 0.00032 34.0 6.1 71 196-274 310-380 (383)
112 2zgy_A Plasmid segregation pro 66.5 15 0.00051 32.0 7.2 68 190-273 247-319 (320)
113 1xho_A Chorismate mutase; sout 63.2 13 0.00044 29.0 5.3 36 68-103 44-79 (148)
114 1dkg_D Molecular chaperone DNA 62.9 2.7 9.2E-05 37.7 1.6 19 22-40 2-20 (383)
115 1jce_A ROD shape-determining p 62.6 11 0.00037 33.1 5.6 45 224-274 279-324 (344)
116 4b9q_A Chaperone protein DNAK; 61.0 4.4 0.00015 39.1 2.9 48 223-275 334-381 (605)
117 3i33_A Heat shock-related 70 k 60.9 3.7 0.00013 37.1 2.2 28 11-40 14-41 (404)
118 3l0q_A Xylulose kinase; xlylul 60.8 18 0.00063 34.2 7.2 72 195-275 418-489 (554)
119 1t6c_A Exopolyphosphatase; alp 60.7 16 0.00056 32.1 6.4 27 14-41 5-31 (315)
120 4gni_A Putative heat shock pro 60.7 11 0.00036 34.1 5.3 48 223-276 345-401 (409)
121 3jvp_A Ribulokinase; PSI-II, N 60.4 17 0.00058 34.7 6.9 75 194-277 414-489 (572)
122 3qfu_A 78 kDa glucose-regulate 60.1 4.2 0.00014 36.4 2.4 19 22-40 18-36 (394)
123 4bc3_A Xylulose kinase; transf 59.0 28 0.00096 32.8 8.1 75 193-276 408-482 (538)
124 2uyt_A Rhamnulokinase; rhamnos 56.8 28 0.00097 32.2 7.6 71 190-274 367-438 (489)
125 3ven_A O-carbamoyltransferase 56.4 9.9 0.00034 36.6 4.4 72 191-277 284-359 (576)
126 1yuw_A Heat shock cognate 71 k 55.5 6 0.0002 37.8 2.7 46 223-275 331-379 (554)
127 2kho_A Heat shock protein 70; 50.6 7.1 0.00024 37.7 2.4 49 222-275 333-381 (605)
128 3d2f_A Heat shock protein homo 50.5 7.5 0.00026 38.1 2.5 48 223-275 335-382 (675)
129 2v7y_A Chaperone protein DNAK; 50.3 8.5 0.00029 36.2 2.8 48 223-275 303-350 (509)
130 3mdq_A Exopolyphosphatase; str 49.9 27 0.00091 30.6 5.9 23 19-41 1-23 (315)
131 3qbx_A Anhydro-N-acetylmuramic 49.5 1E+02 0.0035 27.8 9.7 73 22-105 2-96 (371)
132 3hz6_A Xylulokinase; xylulose, 48.5 24 0.00082 33.1 5.7 70 193-275 378-450 (511)
133 1jce_A ROD shape-determining p 47.6 7.3 0.00025 34.2 1.8 19 21-39 2-20 (344)
134 1dbf_A Protein (chorismate mut 47.6 29 0.00099 26.4 4.9 36 68-103 15-50 (127)
135 3h6e_A Carbohydrate kinase, FG 47.5 28 0.00094 32.5 5.9 61 202-275 374-435 (482)
136 4b9q_A Chaperone protein DNAK; 46.5 27 0.00091 33.6 5.7 19 22-40 2-20 (605)
137 2v7y_A Chaperone protein DNAK; 45.9 23 0.00079 33.1 5.1 19 22-40 2-20 (509)
138 3psf_A Transcription elongatio 45.6 62 0.0021 33.4 8.4 31 22-61 519-554 (1030)
139 2f9w_A Pantothenate kinase; CO 45.2 23 0.0008 30.5 4.6 33 20-61 21-53 (271)
140 1k8k_B ARP2, actin-like protei 43.7 24 0.00084 31.7 4.8 48 224-274 299-363 (394)
141 1ufy_A Chorismate mutase; shik 43.1 37 0.0013 25.7 4.8 37 68-104 14-51 (122)
142 3psi_A Transcription elongatio 41.2 79 0.0027 33.2 8.5 31 22-61 516-551 (1219)
143 1yuw_A Heat shock cognate 71 k 39.8 47 0.0016 31.4 6.3 19 22-40 4-22 (554)
144 3qb0_A Actin-related protein 4 39.7 60 0.0021 30.5 6.9 68 202-273 394-469 (498)
145 1k8k_A ARP3, actin-like protei 39.3 61 0.0021 29.1 6.7 48 224-274 317-386 (418)
146 3dwl_A Actin-related protein 3 38.9 40 0.0014 30.9 5.4 46 225-273 329-394 (427)
147 3cer_A Possible exopolyphospha 36.3 89 0.003 27.6 7.2 82 12-105 7-98 (343)
148 2fsj_A Hypothetical protein TA 32.5 47 0.0016 29.3 4.7 20 22-41 190-209 (346)
149 4apw_A ALP12; actin-like prote 32.5 1.3E+02 0.0044 26.2 7.5 74 193-278 252-327 (329)
150 3cet_A Conserved archaeal prot 31.8 26 0.00087 31.3 2.7 24 23-56 128-151 (334)
151 4a2a_A Cell division protein F 30.9 91 0.0031 28.3 6.4 39 23-77 207-245 (419)
152 1u6z_A Exopolyphosphatase; alp 30.8 1.4E+02 0.0047 27.9 7.8 73 22-105 11-92 (513)
153 2l7a_A Talin-1; vinculin, bund 29.7 1.8E+02 0.0063 22.0 8.3 52 156-213 38-94 (131)
154 4fo0_A Actin-related protein 8 28.5 1.4E+02 0.0047 28.1 7.5 46 225-273 503-562 (593)
155 3cqy_A Anhydro-N-acetylmuramic 27.8 3.3E+02 0.011 24.4 9.5 73 22-105 5-100 (370)
156 2kho_A Heat shock protein 70; 27.2 45 0.0015 32.0 3.8 19 22-40 2-20 (605)
157 3d2f_A Heat shock protein homo 26.0 56 0.0019 31.9 4.3 17 24-40 4-20 (675)
158 3h1q_A Ethanolamine utilizatio 25.8 1.1E+02 0.0037 25.3 5.7 45 223-272 227-271 (272)
159 2fsj_A Hypothetical protein TA 25.4 1.1E+02 0.0036 26.9 5.7 69 192-275 272-344 (346)
160 3js6_A Uncharacterized PARM pr 25.2 50 0.0017 29.3 3.5 78 190-278 261-339 (355)
161 2zgy_A Plasmid segregation pro 25.0 82 0.0028 27.1 4.8 20 21-40 163-182 (320)
162 4dmg_A Putative uncharacterize 24.6 1.6E+02 0.0053 26.5 6.8 70 2-82 16-87 (393)
163 3khy_A Propionate kinase; csgi 23.8 3.2E+02 0.011 24.6 8.5 30 22-59 2-31 (384)
164 2b78_A Hypothetical protein SM 22.5 2.2E+02 0.0077 25.2 7.4 93 2-105 12-110 (385)
165 3cj1_A Ectonucleoside triphosp 22.0 49 0.0017 30.7 2.8 22 20-41 32-53 (456)
166 2i7n_A Pantothenate kinase 1; 20.6 49 0.0017 29.7 2.5 19 23-41 4-22 (360)
167 3aap_A Ectonucleoside triphosp 20.3 63 0.0021 28.8 3.1 21 21-41 2-22 (353)
No 1
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=99.96 E-value=1.9e-27 Score=215.16 Aligned_cols=227 Identities=24% Similarity=0.309 Sum_probs=179.3
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccc--ceeE
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAV--RAVC 99 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i--~~Ig 99 (281)
.|+||||+|||+++++++|+ +|+++.+.+.++.++. .+++++++.+.+.+++++++.+.+..++ .+||
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~---------~G~il~~~~~~~~~~~-~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~ig 80 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHAS---------DGTPLAMAEGGASALS-QGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIG 80 (305)
T ss_dssp CEEEEEEECSSCEEEEEEET---------TCCEEEEEEESCCCGG-GCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEE
T ss_pred CEEEEEEcCccceEEEEEcC---------CCCEEEEEeCCCCCcc-cCHHHHHHHHHHHHHHHHHhcCCChhhhccceEE
Confidence 49999999999999999996 8999998877555543 5789999999999999999988877777 7999
Q ss_pred EcccCCCChhhHHHHHH-h--h--------------------------------------------------------cH
Q 023529 100 LAVSGVNHPTDQQRILN-W--L--------------------------------------------------------SG 120 (281)
Q Consensus 100 ig~~G~~~~~~~~~l~~-~--~--------------------------------------------------------sg 120 (281)
||+||+++++.+..++. . . ++
T Consensus 81 ig~pG~v~~~~~~~l~~~~~~~~pv~v~NDa~aaa~ge~~~~~~v~v~~GTGigg~~i~~~G~~~~aGe~Gh~~~d~g~~ 160 (305)
T 1zc6_A 81 LGLSGVHNRQWAGEFESQAPGFARLSLATDGYTTLLGAHGGQPGIIVALGTGSIGEALYPDGSHREAGGWGYPSGDEASG 160 (305)
T ss_dssp EEESCCCTTSHHHHHHHTCCCCSEEEEECHHHHHHHHHTTTSSEEEEEESSSEEEEEECTTSCEEEESCCCTTTSCTTSH
T ss_pred EEecCCCchHHHHHHHHhCCCCceEEEECCHHHHHHhhcCCCCeEEEEecCCeEEEEEeCCCcEEEecCcccccCCCchH
Confidence 99999987654321211 0 0 67
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccCCChHHhhcchHHHHHHHHhCCHHHHHHHHHHHH
Q 023529 121 YGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKILQDSVE 200 (281)
Q Consensus 121 ~~iG~~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~a~~v~~~A~~GD~~A~~il~~aa~ 200 (281)
+|+|+..+.......||+.+.|.+..++.++++ .+.++++++++.. ....++..++.|+++| +||+.|+++++++++
T Consensus 161 ~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~-~~~~~~~~~~~v~~~a-~GD~~A~~i~~~~~~ 237 (305)
T 1zc6_A 161 AWLGQRAAQLTQMALDGRHSHSPLTRAVLDFVG-GDWQAMMAWNGRA-TPAQFARLAPLVLSAA-RVDPEADALLRQAGE 237 (305)
T ss_dssp HHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHT-SSHHHHHHHHHTC-CHHHHHTTHHHHHHHT-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCChHHHHHHHHHC-cCHHHHHHHHhcc-CHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 899999988887788998888999888888886 4688888776643 2234455678999999 999999999999999
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHHHhhhhcc
Q 023529 201 ELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSFMNA 280 (281)
Q Consensus 201 ~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la~~~~~~~ 280 (281)
+|+.+++++++. | |+.|||+||++....++ |.+.+++. +..++.++++||+++|++.+.++
T Consensus 238 ~L~~~l~~l~~~-~--------p~~VvlgGgv~~~~~~~-l~~~l~~~---------i~~~~~~~~~GAa~la~~~~~~~ 298 (305)
T 1zc6_A 238 DAWAIARALDPQ-D--------ELPVALCGGLGQALRDW-LPPGFRQR---------LVAPQGDSAQGALLLLQRPSTRL 298 (305)
T ss_dssp HHHHHHHHHCTT-C--------CSCEEEESHHHHHTGGG-SCHHHHHH---------CCCCSSCHHHHHHHHTC------
T ss_pred HHHHHHHHHhcC-C--------CCeEEEECCchHhHHHH-HHHHHHhh---------ccCCCCCHHHHHHHHHhhhccch
Confidence 999999999998 8 99999999998643333 66776663 23467889999999998877654
No 2
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=99.95 E-value=2.9e-26 Score=210.26 Aligned_cols=240 Identities=20% Similarity=0.274 Sum_probs=182.4
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcc-cccee
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRS-AVRAV 98 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~-~i~~I 98 (281)
|..|+||||+|||+++++++|+ +|+++.+.+.++.+..+.+++++++.+.+.+++++++.+.+.. ++.+|
T Consensus 4 M~~~~lgiDiGgt~~~~~l~d~---------~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gi 74 (347)
T 2ch5_A 4 MAAIYGGVEGGGTRSEVLLVSE---------DGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSL 74 (347)
T ss_dssp SSCEEEEEEECTTCEEEEEEET---------TSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEE
T ss_pred cceEEEEEEcCccceEEEEEeC---------CCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEE
Confidence 4459999999999999999997 8999998887544432137889999999999999998887766 79999
Q ss_pred EEcccCCCChhhHH----HHHHh-----h---------------------------------------------------
Q 023529 99 CLAVSGVNHPTDQQ----RILNW-----L--------------------------------------------------- 118 (281)
Q Consensus 99 gig~~G~~~~~~~~----~l~~~-----~--------------------------------------------------- 118 (281)
|+|+||+++++... .+++. .
T Consensus 75 gi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~~~~~~v~v~~GTGig~~~v~~~G~~c~cG~~G~l~~ 154 (347)
T 2ch5_A 75 GLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLISGTGSNCRLINPDGSESGCGGWGHMMG 154 (347)
T ss_dssp EEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHHCSSCEEEEEESSSEEEEEECTTSCEEEEECCCTTTC
T ss_pred EEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhhCCCCcEEEEEcCCceeEEEcCCCCEEecCCcCcccC
Confidence 99999998764321 22221 1
Q ss_pred ---cHHHHHHHHHHHHHHhhcCCCCC----chhHHHHHHhcCCCChhhHHHHhccCCChHHhhcchHHHHHHHHhCCHHH
Q 023529 119 ---SGYGIAAQALTAVIRAYDGRGPD----TMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVA 191 (281)
Q Consensus 119 ---sg~~iG~~~l~~~~~~~dg~~~~----~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~a~~v~~~A~~GD~~A 191 (281)
|+++++..++.......||+.+. +.+...+.+.+++.+..+++.+++.......++..++.|+++|++||+.|
T Consensus 155 de~s~~~i~~~~~~~~~~~~dg~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~gD~~a 234 (347)
T 2ch5_A 155 DEGSAYWIAHQAVKIVFDSIDNLEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAEGAQQGDPLS 234 (347)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHTSSCCSSCCHHHHHHHHHHHTCSSHHHHHTTTTTTCCHHHHHTTHHHHHHHHHTTCHHH
T ss_pred CCccHHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHhCCCCHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHH
Confidence 35577777766666666765532 34555566666655666666655543223345445789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCc--------cEEEEcCcccCcchhhhHHHHHHHHHhhC--C----Cce
Q 023529 192 NKILQDSVEELALSVKAVVQRLSLSGEDGKHSF--------PLVMVGGVLEANRRWDIGREVVKCILRDY--P----GAV 257 (281)
Q Consensus 192 ~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~--------~IvLgGgv~~~~~~~~l~~~i~~~l~~~~--p----~~~ 257 (281)
++++++++++|+.++.++++.+| |+ .|+|+||++...+ + |.+.+++.++++. | .++
T Consensus 235 ~~il~~~~~~La~~i~~l~~~~~--------p~~~~~~~~~~IvlgGgv~~~~~-~-~~~~~~~~l~~~~~~~~~~~~~~ 304 (347)
T 2ch5_A 235 RYIFRKAGEMLGRHIVAVLPEID--------PVLFQGKIGLPILCVGSVWKSWE-L-LKEGFLLALTQGREIQAQNFFSS 304 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGSC--------GGGGCSTTCEEEEEESGGGGGHH-H-HHHHHHHHHHHHC---CCCSCSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--------ccccccCCCceEEEECCcccCcH-H-HHHHHHHHHHhhccccccccCCc
Confidence 99999999999999999999999 98 9999999998875 3 8899999998873 2 223
Q ss_pred e--eCCCCChhHHHHHHHHhhhh
Q 023529 258 P--IRPKVEPAVGAALLAWNSFM 278 (281)
Q Consensus 258 i--~~~~~~~~~GAa~la~~~~~ 278 (281)
+ .....++++||++++++.+.
T Consensus 305 i~~~~~~~a~~~GAa~la~~~~~ 327 (347)
T 2ch5_A 305 FTLMKLRHSSALGGASLGARHIG 327 (347)
T ss_dssp EEEEEESSCTHHHHHHHHHHTTT
T ss_pred eEEEecCCChHHHHHHHHHHhcC
Confidence 3 33344899999999987654
No 3
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=99.94 E-value=4.9e-24 Score=191.87 Aligned_cols=226 Identities=24% Similarity=0.374 Sum_probs=171.8
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeE
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Ig 99 (281)
|| |++|||+|||+++++++|+ +|+++.+.+.++.++...+++++++.+.+.+++++.+. +.+||
T Consensus 1 mM-~~lgiDiGgt~~~~~l~d~---------~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~------~~~ig 64 (299)
T 2e2o_A 1 MM-IIVGVDAGGTKTKAVAYDC---------EGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAKGE------ADVVG 64 (299)
T ss_dssp CC-CEEEEEECSSCEEEEEECT---------TSCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHHHTSC------CSEEE
T ss_pred Ce-EEEEEEeCCCcEEEEEEcC---------CCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHhcC------CCEEE
Confidence 45 8999999999999999997 89999998887654312478899999999999887542 56999
Q ss_pred EcccCCCChh-hH----HHHHHhh--------------------------------------------------------
Q 023529 100 LAVSGVNHPT-DQ----QRILNWL-------------------------------------------------------- 118 (281)
Q Consensus 100 ig~~G~~~~~-~~----~~l~~~~-------------------------------------------------------- 118 (281)
+|+||+ +++ .. +.+++ +
T Consensus 65 i~~~G~-~~~~~~~~l~~~l~~-~~~pv~v~ND~~aaa~~e~~~~~~v~l~~GTG~i~~g~~~G~~~~aGE~Gh~~~~~g 142 (299)
T 2e2o_A 65 MGVAGL-DSKFDWENFTPLASL-IAPKVIIQHDGVIALFAETLGEPGVVVIAGTGSVVEGYNGKEFLRVGGRGWLLSDDG 142 (299)
T ss_dssp EEETTC-CSHHHHHHHHHHHTT-SSSEEEEEEHHHHHHHHHHTTSCEEEEEESSSEEEEEECSSCEEEEECSCTTTCCTT
T ss_pred EEcCCC-CchhHHHHHHHHHHh-CCCCEEEeCcHHHHHhhccCCCCeEEEEecCCEEEEEEcCCeEEecCCcCCCcCCCc
Confidence 999999 532 21 12222 2
Q ss_pred cHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccC-CChHHhhcchHHHHHHHHhCCHHHHHHHHH
Q 023529 119 SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVD-PSWARIAALVPVVVSCAEAGDEVANKILQD 197 (281)
Q Consensus 119 sg~~iG~~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~-~~~~~~a~~a~~v~~~A~~GD~~A~~il~~ 197 (281)
++++.|+..++++....++..+.+.+.+.+.+.++..+...+.++.+.. .++..++..++.|++++++||+.|++++++
T Consensus 143 ~~c~cG~~gl~~~~~~le~~~s~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~a~~gd~~a~~il~~ 222 (299)
T 2e2o_A 143 SAYWVGRKALRKVLKMMDGLENKTILYNKVLKTINVKDLDELVMWSYTSSCQIDLVASIAKAVDEAANEGDTVAMDILKQ 222 (299)
T ss_dssp SHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHTTCCSHHHHHHHHHHHTTCHHHHHTTHHHHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHhCCCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4456677666666666677666677766666666655566666655431 112334446789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHHHhh
Q 023529 198 SVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNS 276 (281)
Q Consensus 198 aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la~~~ 276 (281)
++++|+.++.++++.|| |+.|+|+||++.. + + |.+.+++.+.++ .+......+++++||++++++.
T Consensus 223 ~~~~La~~i~~l~~~l~--------p~~IvlgGgv~~~-~-~-~~~~l~~~~~~~--~i~~~~~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 223 GAELLASQAVYLARKIG--------TNKVYLKGGMFRS-N-I-YHKFFTLYLEKE--GIISDLGKRSPEIGAVILAYKE 288 (299)
T ss_dssp HHHHHHHHHHHHHHHHT--------CSEEEEESGGGGS-H-H-HHHHHHHHHHHT--TCEEECCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC--------CCEEEEECCccCc-H-H-HHHHHHHHCCCC--eEeccCCCCChHHHHHHHHHHh
Confidence 99999999999999999 9999999999988 5 3 889999998875 2333233477999999999887
No 4
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=99.91 E-value=2.4e-24 Score=195.80 Aligned_cols=229 Identities=16% Similarity=0.067 Sum_probs=165.3
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeE
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Ig 99 (281)
|+.|+||||+|+|+++++++|+ +|+++.+.+.++.+. .+++++++.+.+.+++++++.+.+..++.+||
T Consensus 4 m~~~~lgiDiggt~~~~~l~d~---------~g~il~~~~~~~~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~ig 72 (326)
T 2qm1_A 4 MDKKIIGIDLGGTTIKFAILTT---------DGVVQQKWSIETNIL--EDGKHIVPSIIESIRHRIDLYNMKKEDFVGIG 72 (326)
T ss_dssp GGCEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCCT--TTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cccEEEEEEECCCEEEEEEECC---------CCCEEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHHHcCCCccceeEEE
Confidence 5679999999999999999997 899999888775432 36788999999999999999888878899999
Q ss_pred EcccCCCChh-----------------hHHHHHHhh--------------------------------------------
Q 023529 100 LAVSGVNHPT-----------------DQQRILNWL-------------------------------------------- 118 (281)
Q Consensus 100 ig~~G~~~~~-----------------~~~~l~~~~-------------------------------------------- 118 (281)
+|+||+++++ ..+.+++.+
T Consensus 73 i~~pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~~pv~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtGiG~giv~ 152 (326)
T 2qm1_A 73 MGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVA 152 (326)
T ss_dssp EEESSEEETTTTEEECBGGGTBCSCBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEEEE
T ss_pred EecccceeCCCCEEEecCCCCccCCchHHHHHHHHhCCCEEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCceEEEEEE
Confidence 9999985321 112232211
Q ss_pred ----------cHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccC---C-ChH-------H-hhcc
Q 023529 119 ----------SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVD---P-SWA-------R-IAAL 176 (281)
Q Consensus 119 ----------sg~~iG~~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~---~-~~~-------~-~a~~ 176 (281)
.+.++|| +...++|..|.|+.. +|++.+ .|..+|.+.+... . ... . -...
T Consensus 153 ~G~l~~G~~g~aGE~Gh-----~~~~~~g~~c~cG~~-gcle~~--~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (326)
T 2qm1_A 153 AGKLLHGVAGCAGEVGH-----VTVDPNGFDCTCGKR-GCLETV--SSATGVVRVARHLSEEFAGDSELKQAIDDGQDVS 224 (326)
T ss_dssp TTEECCCSSSCTTCGGG-----SBSCTTSCBCTTSSB-CBTHHH--HSHHHHHHHHHHHTTTCCSCCHHHHHHHHTCCCC
T ss_pred CCEEeecCCCcccccCc-----EEECCCCCcCCCCCc-cchHhh--hCHHHHHHHHHHHhhcccccchhhhccccccCCC
Confidence 0112233 333445544444432 233443 2555555443211 0 000 0 0113
Q ss_pred hHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCC--
Q 023529 177 VPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYP-- 254 (281)
Q Consensus 177 a~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p-- 254 (281)
++.|++++++||+.|.+++++++++|+.++.++++.|| |+.|+|+||++...+ + |.+.+++.++++.+
T Consensus 225 ~~~v~~~a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~--------p~~IvlgGg~~~~~~-~-~~~~l~~~l~~~~~~~ 294 (326)
T 2qm1_A 225 SKDVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLN--------PDSVVIGGGVSAAGE-F-LRSRVEKYFQEFTFPQ 294 (326)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEEESGGGGTH-H-HHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEcChhhhchH-H-HHHHHHHHHHHhhhhc
Confidence 68899999999999999999999999999999999999 999999999998766 3 88999999988742
Q ss_pred ---CceeeCC---CCChhHHHHHHHHhhh
Q 023529 255 ---GAVPIRP---KVEPAVGAALLAWNSF 277 (281)
Q Consensus 255 ---~~~i~~~---~~~~~~GAa~la~~~~ 277 (281)
.++|..+ .+++++||++++++..
T Consensus 295 ~~~~~~i~~~~~~~~a~~~GAa~l~~~~~ 323 (326)
T 2qm1_A 295 VRNSTKIKLAELGNEAGVIGAASLALQFS 323 (326)
T ss_dssp HHTTSEEEECSSGGGHHHHHHHHHGGGGC
T ss_pred cCCCcEEEEcCcCchHHHHHHHHHHHHhh
Confidence 4556543 3568999999988754
No 5
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=99.91 E-value=6.9e-23 Score=184.07 Aligned_cols=217 Identities=17% Similarity=0.181 Sum_probs=160.9
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEcc
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig~ 102 (281)
+++|||+|||||+++++| +|+++.+.+.+++++...+++++++++.+.+++++ +.+..++.+||+|+
T Consensus 1 ~~lgiDiGGT~~~~~l~d----------~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~---~~~~~~i~~igig~ 67 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAK----------EGKSLGRFQTSGINPFQQDRNEIDTALRSEVLPAI---GQKASSIRAVYFYG 67 (291)
T ss_dssp CEEEEEECSSEEEEEEEE----------TTEEEEEEEEECCCTTTSCHHHHHHHHTTTTHHHH---TTSTTTCCEEEEEE
T ss_pred CEEEEEeCccceEEEEEe----------CCeEEEEEECCCCCcccCCHHHHHHHHHHHHHHHh---CCCcccccEEEEEC
Confidence 479999999999999999 78999988876656532478899999998888764 23445788999999
Q ss_pred cCCCChhhH----HHHHHh-----h------------------------------------------------------c
Q 023529 103 SGVNHPTDQ----QRILNW-----L------------------------------------------------------S 119 (281)
Q Consensus 103 ~G~~~~~~~----~~l~~~-----~------------------------------------------------------s 119 (281)
||++ ++.. +.+++. . +
T Consensus 68 pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~~aGe~G~~~~d~g~ 146 (291)
T 1zbs_A 68 AGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKANVSPLGYILGDEGS 146 (291)
T ss_dssp TTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEEECCCCHHHHCCTTS
T ss_pred CCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEEEeCCCccccCCCch
Confidence 9997 4321 122210 0 5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccC-CChHHhhcchHHHHHHHHhCCHHHHHHHHHH
Q 023529 120 GYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVD-PSWARIAALVPVVVSCAEAGDEVANKILQDS 198 (281)
Q Consensus 120 g~~iG~~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~-~~~~~~a~~a~~v~~~A~~GD~~A~~il~~a 198 (281)
++|+|+..+...... .. .+.+.+.+.+.++. +..+++.+.+.. .++..++.+++.|++ ++||+.|+++++++
T Consensus 147 ~~~~G~~~~~~~~~~---~~-~~~l~~~~~~~~~~-~~~~l~~~~~~~~~~~~~ia~~a~~v~~--~~GD~~A~~i~~~~ 219 (291)
T 1zbs_A 147 GAVLGRLFIGSLLKG---QM-PEGLCEAFLQEYGL-TSADIIESVYRKPFPNRFLAGFSPFIAQ--HLDIPAVYSLVQNS 219 (291)
T ss_dssp HHHHHHHHHHHHHTT---CS-CTTHHHHHHHHTTC-CHHHHHHHHHHSSCHHHHHHTTHHHHHT--TTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc---cC-CChHHHHHHHHhCc-CHHHHHHHHHcCCCCHHHHHHhhHHHHH--hCCCHHHHHHHHHH
Confidence 678888877644332 22 67777788888764 466677666533 222456667899998 88999999999999
Q ss_pred HHHHHHHHHHHHHHc-ccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHHHhhh
Q 023529 199 VEELALSVKAVVQRL-SLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSF 277 (281)
Q Consensus 199 a~~l~~~i~~lv~~l-~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la~~~~ 277 (281)
+++|+.++ .++.+ | |++|+|+||++.+ +.+.+++.++++.+. +..+.++++.||+.++++..
T Consensus 220 ~~~La~~i--~~~~~~~--------p~~vvlgGGv~~~-----~~~~l~~~l~~~~~~--i~~~~~a~~~GA~~la~~~~ 282 (291)
T 1zbs_A 220 FDDFLVRN--VLRYNRP--------DLPLHFIGSVAFH-----YREVLSSVIKKRGLT--LGSVLQSPMEGLIQYHHNNH 282 (291)
T ss_dssp HHHHHHHH--TGGGCCT--------TSCEEEESHHHHH-----THHHHHHHHHHTTCC--EEEEESCSHHHHHHHHHHCC
T ss_pred HHHHHHHH--hcccCCC--------CceEEEECchHHh-----hHHHHHHHHHHcCCe--ecccCcCHHHHHHHHHHhhh
Confidence 99999999 45555 7 9999999999865 357777778776543 34456899999999998643
No 6
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=99.90 E-value=4.8e-24 Score=194.20 Aligned_cols=221 Identities=15% Similarity=0.105 Sum_probs=162.8
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEc
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig 101 (281)
.|+||||+|+|+++++++|+ +|+++.+.+.++ + .+++++++.+.+.+++++++ .++.+||+|
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~---------~G~i~~~~~~~~--~--~~~~~~~~~i~~~i~~~~~~-----~~i~gigi~ 63 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDE---------EGRILSTFKVAT--P--PTAEGIVDAICAAVAGASEG-----HDVEAVGIG 63 (321)
T ss_dssp CEEEEEEECSSEEEEEEECT---------TCCBCCCEEEEC--C--SSHHHHHHHHHHHHHHHHTT-----CCEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC---------CCCEEEEEEeeC--C--CCHHHHHHHHHHHHHHHHhh-----cCceEEEEe
Confidence 69999999999999999997 899998887775 2 47899999999999988753 368999999
Q ss_pred ccCCCChhh----------------HHHHHHhh-----------------------------------------------
Q 023529 102 VSGVNHPTD----------------QQRILNWL----------------------------------------------- 118 (281)
Q Consensus 102 ~~G~~~~~~----------------~~~l~~~~----------------------------------------------- 118 (281)
+||+++++. .+.+++.+
T Consensus 64 ~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~gii~~G~ 143 (321)
T 3vgl_A 64 AAGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNK 143 (321)
T ss_dssp ESSEECTTSSCEEECSSSCCEEECHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTE
T ss_pred ccccEeCCCCEEEeCCCCCCcCCCHHHHHhhhhCCCEEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcceEEEEEECCE
Confidence 999966421 12233221
Q ss_pred -------cHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccC---CChH----------Hh-hcch
Q 023529 119 -------SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVD---PSWA----------RI-AALV 177 (281)
Q Consensus 119 -------sg~~iG~~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~---~~~~----------~~-a~~a 177 (281)
.+.++|| +...++|..|.|+.. +|++.+ .|..++.+.+... .+.. .. ....
T Consensus 144 l~~G~~g~aGEiGh-----~~v~~~g~~c~cG~~-gclE~~--~S~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (321)
T 3vgl_A 144 LRRGRFGVAAEFGH-----IRVVPDGLLCGCGSQ-GCWEQY--ASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEG 215 (321)
T ss_dssp ECCCTTSCCCCGGG-----SBSSTTCSBCTTSCB-SBGGGT--SSHHHHHHHHHHHHHHCGGGCHHHHHTTTSSSTTCCH
T ss_pred EecCCCCCCccccc-----eEecCCCCCCCCCCc-CcHHHh--cCHHHHHHHHHHHhhcCCcchhhhhhcccCccccCCH
Confidence 0112333 444566666665543 456666 4777777654321 0000 00 1135
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCC---
Q 023529 178 PVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYP--- 254 (281)
Q Consensus 178 ~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p--- 254 (281)
+.|++++++||+.|++++++++++|+.+++++++.|| |+.|||+||+....+. |.+.+++.++++.+
T Consensus 216 ~~i~~~a~~gD~~a~~~~~~~~~~La~~i~~l~~~l~--------p~~IvlgGgi~~~~~~--l~~~l~~~l~~~~~~~~ 285 (321)
T 3vgl_A 216 KHISEAARQGDPVAVDSFRELARWAGAGLADLASLFD--------PSAFIVGGGVSDEGEL--VLDPIRKSFRRWLIGGE 285 (321)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGTHH--HHHHHHHHHHHHCTTGG
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeChhhcchHH--HHHHHHHHHHHhccccc
Confidence 8899999999999999999999999999999999999 9999999999998762 78999999987652
Q ss_pred ---CceeeCC---CCChhHHHHHHHHhhhh
Q 023529 255 ---GAVPIRP---KVEPAVGAALLAWNSFM 278 (281)
Q Consensus 255 ---~~~i~~~---~~~~~~GAa~la~~~~~ 278 (281)
.++|..+ .+++++||++++.+.+.
T Consensus 286 ~~~~~~i~~s~l~~~a~l~GAa~l~~~~~~ 315 (321)
T 3vgl_A 286 WRPHAQVLAAQLGGKAGLVGAADLARQGLE 315 (321)
T ss_dssp GSCCCEEEECTTGGGHHHHHHHHHHHTC--
T ss_pred ccCCCEEEECCCCCcHHHHHHHHHHHhhhh
Confidence 3455543 45689999999987653
No 7
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=99.89 E-value=5.8e-23 Score=185.66 Aligned_cols=219 Identities=16% Similarity=0.137 Sum_probs=157.7
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEcc
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig~ 102 (281)
|++|||+|||+++++++|+ + +++.+.+.++... ..+++++.+.+.+++++++. ..++.+||+|+
T Consensus 2 ~~lgiDiGgt~i~~~l~d~---------~-~~l~~~~~~~~~~---~~~~~~~~i~~~i~~~~~~~---~~~i~gigi~~ 65 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDG---------K-RLLSKVVVPTPKE---GGERVAEALAEAAERAEREA---GVRGEAIGLGT 65 (302)
T ss_dssp CEEEEEECSSEEEEEEECS---------S-SBSCCEEEECCSS---CHHHHHHHHHHHHHHHHHHH---TCCCSSEEEEE
T ss_pred EEEEEEEcCCEEEEEEEeC---------C-CcEEEEEEcCCCC---ChHHHHHHHHHHHHHHHhhc---cCCceEEEEEe
Confidence 8999999999999999996 5 4556666664332 34889999999999998765 35789999999
Q ss_pred cCCCChhh-----------------HHHHHHhh-----------------------------------------------
Q 023529 103 SGVNHPTD-----------------QQRILNWL----------------------------------------------- 118 (281)
Q Consensus 103 ~G~~~~~~-----------------~~~l~~~~----------------------------------------------- 118 (281)
||+++++. .+.+++.+
T Consensus 66 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~gii~~g~ 145 (302)
T 3vov_A 66 PGPLDFRRGVIRFAPNIPGVQDFPIRRILEEATGRPVFLENDANAAALAEHHLGAAQGEESSLYLTVSTGIGGGVVLGGR 145 (302)
T ss_dssp SSCEETTTTEEC---CCTTCTTCCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEEEETTE
T ss_pred cccEeCCCCEEEcCCCCCCcCCCChHHHHHHhhCCCEEEEechHHHHHHHHHhCCCCCCCCEEEEEECCceeEEEEECCE
Confidence 99965321 11222211
Q ss_pred -------cHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccCCChHHhhcchHHHHHHHHhCCHHH
Q 023529 119 -------SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVA 191 (281)
Q Consensus 119 -------sg~~iG~~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~a~~v~~~A~~GD~~A 191 (281)
.+.++|| +...++|..|.|+.. .|++.+ .|..++.+.+..... . ....+.|++++++||+.|
T Consensus 146 l~~G~~g~aGEiGh-----~~v~~~g~~c~cg~~-gclE~~--~s~~~l~~~~~~~~~-~--~~~~~~i~~~a~~gd~~a 214 (302)
T 3vov_A 146 VLRGERGQGGELGH-----LTLLPGGPACGCGLE-GCLEAL--AAGRALERDATYAFQ-R--PVDTRELFRLFQAGDPKA 214 (302)
T ss_dssp ECCCTTSCTTCGGG-----SBSSTTCCBCTTSCB-SBHHHH--HSHHHHHHHHHHHHT-S--CCCHHHHHHHHHTTCHHH
T ss_pred EeeCCCCCCccccc-----eEecCCCCCCCCCCc-chHHHH--hCHHHHHHHHHHhhC-C--CCCHHHHHHHHHcCCHHH
Confidence 1112333 444456666666544 344544 367777665432110 0 113578999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcc-cCcchhhhHHHHHHHHHhhCC---CceeeCC---CCC
Q 023529 192 NKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVL-EANRRWDIGREVVKCILRDYP---GAVPIRP---KVE 264 (281)
Q Consensus 192 ~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~-~~~~~~~l~~~i~~~l~~~~p---~~~i~~~---~~~ 264 (281)
++++++++++|+.++.++++.|| |+.|||+|++. ...+ + |.+.+++.++++.+ ...|..+ .++
T Consensus 215 ~~~~~~~~~~l~~~i~~l~~~~~--------p~~ivlgG~i~~~~~~-~-l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a 284 (302)
T 3vov_A 215 ERLVLQAARYVGIGLASLVKAFD--------PGVVVLGGGVALNAPE-G-YWEALLEAYRRYLQGWEAPPLRRARLGAEA 284 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESHHHHTSCH-H-HHHHHHHHHHHTTTTSCCCCEEECSSGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEeChhHhhhhH-H-HHHHHHHHHHHhcchhcCCcEEEcCCCCcH
Confidence 99999999999999999999999 99999999999 7776 3 89999999998752 1224433 456
Q ss_pred hhHHHHHHHHhhhh
Q 023529 265 PAVGAALLAWNSFM 278 (281)
Q Consensus 265 ~~~GAa~la~~~~~ 278 (281)
+++||++++++.+.
T Consensus 285 ~~~GAa~l~~~~~~ 298 (302)
T 3vov_A 285 GLLGAALTAYLEVK 298 (302)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 89999999997764
No 8
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.88 E-value=1.1e-22 Score=192.15 Aligned_cols=232 Identities=12% Similarity=0.099 Sum_probs=166.4
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igi 100 (281)
..|++|||+|+|+++++++|+ +|+++.+.+.+.. . .+++++++.+.+.+++++++.+.+..++.+|||
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~---------~G~il~~~~~~~~-~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi 174 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHEL---------GGEVLIDTKIDIH-E--IDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAI 174 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEET---------TSCEEEEEEEECC-C--CBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEE
T ss_pred CCEEEEEEECCCEEEEEEECC---------CCCEEEEEEEcCC-C--CCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEE
Confidence 469999999999999999997 8999998877643 2 368999999999999999998887788999999
Q ss_pred cccCCCChhh----------------HHHHHHhh---------------cHHHHHH------------------------
Q 023529 101 AVSGVNHPTD----------------QQRILNWL---------------SGYGIAA------------------------ 125 (281)
Q Consensus 101 g~~G~~~~~~----------------~~~l~~~~---------------sg~~iG~------------------------ 125 (281)
|+||+++++. .+.+++.+ +.+|.|.
T Consensus 175 ~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G 254 (429)
T 1z05_A 175 TLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDG 254 (429)
T ss_dssp EESSEEETTTTEEEECSSSBCSSBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETT
T ss_pred eccCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhCCCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEECC
Confidence 9999865321 12233221 0001100
Q ss_pred ----------HHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccC---CChHH----hhcchHHHHHHHHhCC
Q 023529 126 ----------QALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVD---PSWAR----IAALVPVVVSCAEAGD 188 (281)
Q Consensus 126 ----------~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~---~~~~~----~a~~a~~v~~~A~~GD 188 (281)
.-++|+...++|..|.|+.. +|++.+ .|..+|...+... ..... -....+.|++++++||
T Consensus 255 ~l~~G~~g~AGEiGH~~v~~~g~~c~cG~~-gclE~~--~S~~al~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~a~~gD 331 (429)
T 1z05_A 255 RVLQGRHGNIGELGHIQIDPQGKRCHCGNY-GCLETV--ASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAADGD 331 (429)
T ss_dssp EECCTTTTCTTBCTTSBCCTTCCBCTTSCB-SBTHHH--HSHHHHHHHHHHHHHTTCCCTTTTCSSCCHHHHHHHHHTTC
T ss_pred EEeeCCCCcccccCceEEcCCCCCCCCCCC-cchHHH--hCHHHHHHHHHHHhhcccccccccccCCCHHHHHHHHHcCC
Confidence 00122334455555555543 344444 3666666544321 00000 0123688999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhC-C----CceeeC---
Q 023529 189 EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY-P----GAVPIR--- 260 (281)
Q Consensus 189 ~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~-p----~~~i~~--- 260 (281)
+.|++++++++++|+.+++++++.|| |+.|||+|++....+. |.+.+++.+.++. | .++|..
T Consensus 332 ~~a~~il~~~~~~L~~~i~~l~~~ld--------P~~IvlgG~i~~~~~~--l~~~l~~~l~~~~~~~~~~~~~I~~s~l 401 (429)
T 1z05_A 332 PLAVDVIQQLGRYLGAAIAIVINLFN--------PEKILIGGVINQAKSI--LYPSIEQCIREQSLPVYHQDLKLVESRF 401 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGHHH--HHHHHHHHHHHHSCHHHHTTCEEEECSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEeCccccchHH--HHHHHHHHHHHhcccccCCCcEEEEecC
Confidence 99999999999999999999999999 9999999999987662 8899999998873 2 345554
Q ss_pred CCCChhHHHHHHHHhhhh
Q 023529 261 PKVEPAVGAALLAWNSFM 278 (281)
Q Consensus 261 ~~~~~~~GAa~la~~~~~ 278 (281)
..+ +++||++++++.+.
T Consensus 402 ~~~-~~~GAa~l~~~~~~ 418 (429)
T 1z05_A 402 YKQ-ATMPGAALIKQALY 418 (429)
T ss_dssp SSC-TTHHHHHHHHHHHH
T ss_pred CCc-cHHHHHHHHHHHHh
Confidence 345 99999999987653
No 9
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=99.88 E-value=1.2e-22 Score=185.55 Aligned_cols=220 Identities=16% Similarity=0.077 Sum_probs=159.4
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEcc
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig~ 102 (281)
|++|||+|||+++++++|+ +|+++.+.+.++.+ .+++++++.+.+.++++..+.+ .+.+||||+
T Consensus 25 ~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~----~~~gigi~~ 88 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNE---------KLERVATERVPTPT---DDYPLLLETIAGLVAKYDQEFA----CEGKIGLGL 88 (327)
T ss_dssp CEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCT---TCHHHHHHHHHHHHHHHHHHHT----SCCEEEEEE
T ss_pred EEEEEEECCCEEEEEEEeC---------CCcEEEEEEecCCC---CCHHHHHHHHHHHHHHHHHhcC----CccEEEEEe
Confidence 8999999999999999997 99999998877543 3789999999999999887653 477999999
Q ss_pred cCCCChhh----------------HHHHHHhh------------------------------------------------
Q 023529 103 SGVNHPTD----------------QQRILNWL------------------------------------------------ 118 (281)
Q Consensus 103 ~G~~~~~~----------------~~~l~~~~------------------------------------------------ 118 (281)
||+++++. .+.+++.+
T Consensus 89 pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pV~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtGiG~gii~~G~l 168 (327)
T 4db3_A 89 PGMEDADDATVLTVNVPAAKGKPLRADLEAKIGRSVKIENDANCFALSEAWDEELQDAPSVMGLILGTGFGGGLIYEGKV 168 (327)
T ss_dssp SEEECTTTCCEEESSSGGGTTSCHHHHHHHHHSSCCEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSSEEEEEEETTEE
T ss_pred eccEeCCCCEEEcCCCccccCCCHHHHHHHHHCCCEEEecchhHHHHHHHHhCCCCCCCcEEEEEeCccceEEEEECCEE
Confidence 99976421 12232211
Q ss_pred ------cHHHHHHHHHHHHH-----HhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccCCChHHhhcchHHHHHHHHhC
Q 023529 119 ------SGYGIAAQALTAVI-----RAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAG 187 (281)
Q Consensus 119 ------sg~~iG~~~l~~~~-----~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~a~~v~~~A~~G 187 (281)
.+.++||..+.... ...+|..|.|... .|++.+ .|..++.+.+..... . ....+.|++++++|
T Consensus 169 ~~G~~g~aGEiGh~~v~~~~~~~~~~~~~g~~C~cG~~-gclE~~--~S~~al~~~~~~~~~-~--~~~~~~i~~~a~~g 242 (327)
T 4db3_A 169 FSGRNNVAGELGHMRLPLDAWFHLGDNAPLLGCGCGKK-GCLDSY--LSGRGFELLYAHYYG-E--EKKAIDIIKANAAG 242 (327)
T ss_dssp CCCTTSCTTCGGGSBCCHHHHHHTCTTCCCCBCTTSCB-SBGGGT--SSHHHHHHHHHHHHS-C--CCCHHHHHHHHHHT
T ss_pred eecCCCcCcccccEEeccccccccccccCCCcCCCCCc-chhHhh--hCHHHHHHHHHHhcC-C--CCCHHHHHHHHHcC
Confidence 11234443221000 0005666665543 456666 477777765532110 0 11257899999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhC----CCceeeCC--
Q 023529 188 DEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY----PGAVPIRP-- 261 (281)
Q Consensus 188 D~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~----p~~~i~~~-- 261 (281)
|+.|++++++++++|+.+++++++.|| |+.|||||++... +. |.+.+++.+.++. +.++|..+
T Consensus 243 D~~a~~~~~~~~~~La~~i~~l~~~l~--------p~~IvlgGgi~~~-~~--l~~~l~~~l~~~~~~~~~~~~i~~s~l 311 (327)
T 4db3_A 243 DEKAAEHVERFMELLAICFGNIFTAND--------PHVVALGGGLSNF-EL--IYEEMPKRVPKYLLSVAKCPKIIKAKH 311 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGC-TH--HHHHHHHHGGGGSCTTCCCCEEEECSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeCcccch-HH--HHHHHHHHHHHHhccccCCCEEEECCC
Confidence 999999999999999999999999999 9999999999986 32 7889999998875 23455543
Q ss_pred -CCChhHHHHHHHHh
Q 023529 262 -KVEPAVGAALLAWN 275 (281)
Q Consensus 262 -~~~~~~GAa~la~~ 275 (281)
.+++++||++++++
T Consensus 312 g~~a~~~GAa~l~l~ 326 (327)
T 4db3_A 312 GDSGGVRGAAFLNIK 326 (327)
T ss_dssp GGGHHHHHHHHTTCC
T ss_pred CCcHHHHHHHHHHhc
Confidence 45689999998764
No 10
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=99.88 E-value=3.3e-22 Score=180.23 Aligned_cols=213 Identities=10% Similarity=0.026 Sum_probs=147.2
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEcc
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig~ 102 (281)
|++|||+|||+++++++|+ +|+++.+.+.+..+ .+++++++.+.+. +.+ ..++.+||||+
T Consensus 5 ~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~i~~~----~~~----~~~i~gigi~~ 64 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLP---------HGEIILTKSAEISG---SDGDQILAEMKVF----LAE----NTDVTGIAVSA 64 (297)
T ss_dssp CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECST---TCHHHHHHHHHHH----HHT----CTTCCEEEEEE
T ss_pred EEEEEEeCCCeEEEEEECC---------CCCEEEEEEecCCC---CCHHHHHHHHHHH----Hhh----cCCeeEEEEec
Confidence 8999999999999999997 99999988877532 2456666555444 332 24689999999
Q ss_pred cCCCChhh-----------H------HHHHHhh----------cH-----------------------------------
Q 023529 103 SGVNHPTD-----------Q------QRILNWL----------SG----------------------------------- 120 (281)
Q Consensus 103 ~G~~~~~~-----------~------~~l~~~~----------sg----------------------------------- 120 (281)
||+++++. | +.+++.+ ..
T Consensus 65 pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pV~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~giv~~G~ 144 (297)
T 4htl_A 65 PGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGE 144 (297)
T ss_dssp SSEECTTTCEEEECTTCGGGTTEEHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTE
T ss_pred CcceeCCCCEEEeCCCCCCccCCCHHHHHHHHHCcCEEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcceEEEEEECCE
Confidence 99976421 1 1222211 00
Q ss_pred ---------HHHHHHHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccC--CChHHhhcchHHHHHHHHhCCH
Q 023529 121 ---------YGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVD--PSWARIAALVPVVVSCAEAGDE 189 (281)
Q Consensus 121 ---------~~iG~~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~--~~~~~~a~~a~~v~~~A~~GD~ 189 (281)
.++|| +....++.. ++ ...+++.+ .|..++.+.+... .+... ...+.|++++++||+
T Consensus 145 l~~G~~g~aGEiGh-----~~~~~~~~~--~~-~~~~le~~--~s~~~l~~~~~~~~~~~~~~--~~~~~i~~~a~~gd~ 212 (297)
T 4htl_A 145 LVRGGRFRAGEFGY-----MFSERPGAF--RP-GKYTLNET--TTMLVLRRQYAELTGRPLEE--ITGEEIFANYDAHDA 212 (297)
T ss_dssp ECCCTTSCCCCGGG-----SBSSCCCSS--CG-GGGBHHHH--SSHHHHHHHHHHHHCCCGGG--CCHHHHHHHHHTTCH
T ss_pred EEecCCCCcccccc-----eEecCCCCc--Cc-ccCcHHHh--ccHHHHHHHHHHHhcCCccC--CCHHHHHHHHHcCCH
Confidence 11222 222223321 11 12344444 3677776654321 11111 125789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhC-CCceeeCC---CCCh
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY-PGAVPIRP---KVEP 265 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~-p~~~i~~~---~~~~ 265 (281)
.|++++++++++|+.+++++++.|| |+.|||+|+++.. +. |.+.+++.++++. +.++|..+ .+++
T Consensus 213 ~a~~~~~~~~~~La~~i~~l~~~~~--------p~~IvlgGgi~~~-~~--~~~~l~~~l~~~~~~~~~i~~s~lg~~a~ 281 (297)
T 4htl_A 213 VSERLITEFYTGICTGLYNLIYLFD--------PTHIFIGGGITSR-PT--FIAELKHHMESFGLRDTIIETATHKNQAG 281 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGS-TT--HHHHHHHHHTTTCCTTCEEEECSCTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeCccccc-HH--HHHHHHHHHHHhccCCCeEEECCcCChHH
Confidence 9999999999999999999999999 9999999999986 42 7899999998764 34455543 5679
Q ss_pred hHHHHHHHHhhhh
Q 023529 266 AVGAALLAWNSFM 278 (281)
Q Consensus 266 ~~GAa~la~~~~~ 278 (281)
++||++++++.+.
T Consensus 282 ~~GAa~l~~~~~~ 294 (297)
T 4htl_A 282 LLGAVYHFLQEEN 294 (297)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHhHHHHHHHHhc
Confidence 9999999998765
No 11
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=99.88 E-value=9.5e-24 Score=189.73 Aligned_cols=215 Identities=16% Similarity=0.189 Sum_probs=147.0
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEcc
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig~ 102 (281)
|++|||+|||||+++++| +|+++.+.+.++.|+...+++++++++.+.+++++. ..++.+||+|+
T Consensus 1 ~~lgiDiGGT~i~~~l~d----------~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~-----~~~i~~igig~ 65 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL----------NGAVIKRLGTKGINPFFQSEEEIQQKLTASLLPQLP-----EGKFNAVYFYG 65 (291)
T ss_dssp ---CEECCTTCEEEEEEC----------SSSEEEEEEECCCCTTTSCSTTTTTTTTC------------------CEEEC
T ss_pred CEEEEEeccccEEEEEEc----------CCeEEEEEECCCCCcccCCHHHHHHHHHHHHHHhcC-----cccccEEEEEc
Confidence 479999999999999998 789999888776665323667788888888887653 24688999999
Q ss_pred cCCCChhh----HHHHHHh-----h------------------------------------------------------c
Q 023529 103 SGVNHPTD----QQRILNW-----L------------------------------------------------------S 119 (281)
Q Consensus 103 ~G~~~~~~----~~~l~~~-----~------------------------------------------------------s 119 (281)
||++ ++. .+.+++. - +
T Consensus 66 pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~g~~~~v~v~~GTGi~g~gi~~~G~~~~aGe~Gh~~~d~g~ 144 (291)
T 1zxo_A 66 AGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLCGQKAGIACILGTGSNSCFYNGKEIVSNISPLGFILGDEGS 144 (291)
T ss_dssp TTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTTTTSCBEEEEESSSEEEEEECSSSEEEECCCCCTTTSCCSS
T ss_pred CCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhcCCCCcEEEEeCCChheEEECCCCcEEEeCCCccccCCCch
Confidence 9997 332 1222211 0 5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccC-CChHHhhcchHHHHHHHHhCCHHHHHHHHHH
Q 023529 120 GYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVD-PSWARIAALVPVVVSCAEAGDEVANKILQDS 198 (281)
Q Consensus 120 g~~iG~~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~-~~~~~~a~~a~~v~~~A~~GD~~A~~il~~a 198 (281)
++|+|+..+..+... +. .+.+.+.+.+.++. +.++++.+++.. .++..++.+++.|++ ++||+.|+++++++
T Consensus 145 ~~~~G~~~~~~~~~~---~~-~~~l~~~~~~~~~~-~~~~l~~~~~~~~~~~~~ia~~a~~v~~--~~GD~~A~~i~~~~ 217 (291)
T 1zxo_A 145 GAVLGKLLVGDILKN---QL-PATLKEEFLKQFDL-TPPEIIDRVYRQPFPNRFLASLSPFIAQ--HLEEPAIRQLVMNS 217 (291)
T ss_dssp HHHHHHHHHHHGGGT---CS-CSHHHHHHHHHHTC-CHHHHGGGTTTSSCSTTTSSTTTHHHHT--TTTSTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHc---cC-CChHHHHHHHHhCC-CHHHHHHHHhcCCCCHHHHHHhhHHHHH--hCCCHHHHHHHHHH
Confidence 678888776543222 33 67777777777764 456666655432 122455666889998 88999999999999
Q ss_pred HHHHHHHHHHHHHHc-ccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHHHhhh
Q 023529 199 VEELALSVKAVVQRL-SLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNSF 277 (281)
Q Consensus 199 a~~l~~~i~~lv~~l-~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la~~~~ 277 (281)
+++|+.++ . ++.+ | |++|+|+||++.+ |++.+++.+++ |.+++..+++++++||++++++.+
T Consensus 218 ~~~La~~i-~-~~~~~~--------p~~vvlgGGv~~~-----l~~~l~~~l~~--~~~~i~~~~~a~~~GAa~la~~~~ 280 (291)
T 1zxo_A 218 FIAFFRRN-V-MQYDYK--------QYPVHFIGSIAYC-----YKEILQDAARQ--TGIQIGKILQSPMEGLIQYHSQLS 280 (291)
T ss_dssp HHHHHTTT-G-GGSCTT--------TSCEEECSHHHHH-----THHHHHHHTTT--TTCCEEEECSCTHHHHHTTSSSCC
T ss_pred HHHHHHHH-h-cccCCC--------CceEEEECcHHHH-----HHHHHHHHHhc--CCcEEeecCCCHHHHHHHHHHHHh
Confidence 99999999 3 4555 7 9999999999865 46788888776 556676778899999999987544
No 12
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.87 E-value=7.1e-22 Score=183.87 Aligned_cols=220 Identities=10% Similarity=0.044 Sum_probs=154.0
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igi 100 (281)
..|++|||+|+|+++++++|+ +|+++.+.+.+.... .+++++++.+.+.+++++++.+.+..++.+||+
T Consensus 86 ~~~~lGIDiGgt~i~~~l~d~---------~G~vl~~~~~~~~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi 154 (380)
T 2hoe_A 86 CAYVLGIEVTRDEIAACLIDA---------SMNILAHEAHPLPSQ--SDREETLNVMYRIIDRAKDMMEKLGSKLSALTV 154 (380)
T ss_dssp GCEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCSS--CCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCeEEEEEECCCEEEEEEECC---------CCCEEEEEEEccCCC--CCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEE
Confidence 469999999999999999997 899999888765332 478999999999999999988776678999999
Q ss_pred cccCCCChhh----------------HHHHHHhh----------cHHHHHHHHH--------------------------
Q 023529 101 AVSGVNHPTD----------------QQRILNWL----------SGYGIAAQAL-------------------------- 128 (281)
Q Consensus 101 g~~G~~~~~~----------------~~~l~~~~----------sg~~iG~~~l-------------------------- 128 (281)
|+||+++++. .+.+++.+ ....+|....
T Consensus 155 ~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~G~l 234 (380)
T 2hoe_A 155 AAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIIDGEL 234 (380)
T ss_dssp EESSCEETTTTEECCCSSCTTBTSCHHHHHHHHHCSEEEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEETTEE
T ss_pred EeeccEECCCCEEeccCCCCCcCCChHHHHHHHhCCCEEEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEECCEE
Confidence 9999965421 12233322 1111111000
Q ss_pred -----------HHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccCCChHHhhcchHHHHHHHHhCCHHHHHHHHH
Q 023529 129 -----------TAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKILQD 197 (281)
Q Consensus 129 -----------~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~a~~v~~~A~~GD~~A~~il~~ 197 (281)
+|+....+ ..|.|+. ..|++.+ .|..++.+ ..+.+++++++||+.|.+++++
T Consensus 235 ~~G~~g~aGEiGh~~v~~~-~~c~cG~-~gclE~~--~s~~~l~~-------------~~~~v~~~a~~gD~~a~~~l~~ 297 (380)
T 2hoe_A 235 YRGENGYAGEIGYTRVFNG-NEYVFLE-DVCNENV--VLKHVLSM-------------GFSSLAEARDSGDVRVKEYFDD 297 (380)
T ss_dssp CCCSSSCCCCGGGCEEECS-SSEEEHH-HHHCHHH--HHHHHHHH-------------CCC-TTHHHHTTCHHHHHHHHH
T ss_pred eccCCCccccccceEecCC-CCCCCCC-ccHHHHH--cCHHHHHH-------------HHHHHHHHHHCCCHHHHHHHHH
Confidence 01111111 1111221 2333333 12332221 2357888999999999999999
Q ss_pred HHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCC---CceeeCC---CCChhHHHHH
Q 023529 198 SVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYP---GAVPIRP---KVEPAVGAAL 271 (281)
Q Consensus 198 aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p---~~~i~~~---~~~~~~GAa~ 271 (281)
++++|+.+++++++.|| |+.|||+|++....+ + |.+.+++.+.++.+ .+++..+ .+++++||+.
T Consensus 298 ~~~~La~~i~~l~~~ld--------P~~IvlgG~~~~~~~-~-l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~ 367 (380)
T 2hoe_A 298 IARYFSIGLLNLIHLFG--------ISKIVIGGFFKELGE-N-FLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAV 367 (380)
T ss_dssp HHHHHHHHHHHHHHHHC--------CCEEEEEEGGGGGHH-H-HHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC--------CCEEEEcCchhhhhH-H-HHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHH
Confidence 99999999999999999 999999999988766 3 88999999988752 3455433 3568999999
Q ss_pred HHHhhhh
Q 023529 272 LAWNSFM 278 (281)
Q Consensus 272 la~~~~~ 278 (281)
++++.+.
T Consensus 368 l~~~~~~ 374 (380)
T 2hoe_A 368 HALENYL 374 (380)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9987653
No 13
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=99.87 E-value=1.9e-21 Score=178.32 Aligned_cols=224 Identities=13% Similarity=0.068 Sum_probs=156.0
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igi 100 (281)
..|++|||+|+|+++++++|+ +|+++.+.+.++. .+++++++.+.+.+++++.+.+.+..++.+|||
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~----~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi 95 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSM---------KGEIVKKYTQFNP----KTYEERINLILQMCVEAAAEAVKLNCRILGVGI 95 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECC----SSHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECC---------CCcEEEEEEEcCC----CCHHHHHHHHHHHHHHHHHhcccccCceEEEEE
Confidence 469999999999999999997 8999988877642 367888899999999998876555567999999
Q ss_pred cccCCCChh------------h------HHHHHHhh--------------------------------------------
Q 023529 101 AVSGVNHPT------------D------QQRILNWL-------------------------------------------- 118 (281)
Q Consensus 101 g~~G~~~~~------------~------~~~l~~~~-------------------------------------------- 118 (281)
|+||+++++ . .+.+++.+
T Consensus 96 ~~pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtGiG~gii~ 175 (343)
T 2yhw_A 96 STGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIH 175 (343)
T ss_dssp EESSEEETTTTEEEECCTTSSSCSSEECHHHHHHHHCSCEEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSSEEEEEEE
T ss_pred ecccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCCEEEEEEE
Confidence 999985431 1 12232211
Q ss_pred ----------cHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccC----C-------ChHHhhcch
Q 023529 119 ----------SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVD----P-------SWARIAALV 177 (281)
Q Consensus 119 ----------sg~~iG~~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~----~-------~~~~~a~~a 177 (281)
.+.++|| +...++|..|.|... +|++.+ .|..+|.+.+... . ....-...+
T Consensus 176 ~G~l~~G~~g~aGEiGh-----~~~~~~g~~c~cG~~-gclE~~--~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T 2yhw_A 176 QHELIHGSSFCAAELGH-----LVVSLXGPDCSCGSH-GCIEAY--ASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGA 247 (343)
T ss_dssp TTEECCCTTSCTTCGGG-----CBCCC--CBCTTSCB-SBHHHH--HSHHHHHHHHHHHHHTTCSCCTTCCC----CCCH
T ss_pred CCEEecCCCCcccccCC-----EEEccCCCcCCCCCC-CcHHHh--cCHHHHHHHHHHhhcccccccccccccccccCCH
Confidence 0111222 333344544544433 344444 3566665443210 0 000001236
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhC----
Q 023529 178 PVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY---- 253 (281)
Q Consensus 178 ~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~---- 253 (281)
+.|++++++||+.|++++++++++|+.++.++++.|| |+.|||+|++. + + |.+.+++.++++.
T Consensus 248 ~~v~~~a~~gd~~a~~il~~~~~~La~~i~~l~~~l~--------P~~IvlgG~i~---~-~-~~~~l~~~l~~~~~~~~ 314 (343)
T 2yhw_A 248 LHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMN--------PSLVILSGVLA---S-H-YIHIVKDVIRQQALSSV 314 (343)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTC--------CSEEEEESTTH---H-H-HHHHHHHHHHHHSCGGG
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeCCcH---H-H-HHHHHHHHHHHhccccc
Confidence 8899999999999999999999999999999999999 99999999996 3 2 7889999888764
Q ss_pred CCceeeC--CCCChhHHHHHHHHhhhh
Q 023529 254 PGAVPIR--PKVEPAVGAALLAWNSFM 278 (281)
Q Consensus 254 p~~~i~~--~~~~~~~GAa~la~~~~~ 278 (281)
..+++.. ..+++++||+.++++.+.
T Consensus 315 ~~~~i~~s~~~~~~~~GAa~l~~~~~~ 341 (343)
T 2yhw_A 315 QDVDVVVSDLVDPALLGAASMVLDYTT 341 (343)
T ss_dssp TTCEEEECCCSCHHHHHHHHHHHHHC-
T ss_pred CCcEEEEccCCCchHHHHHHHHHHHhh
Confidence 1344443 345689999999987653
No 14
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=99.86 E-value=4.8e-22 Score=181.05 Aligned_cols=216 Identities=15% Similarity=0.112 Sum_probs=152.8
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEc
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig 101 (281)
.|++|||+|||+++++++|+ +|+++.+.+.++.+ .+++++++.|.+.++++..+.+ ++.+||||
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~---------~g~il~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~----~i~~igi~ 87 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDS---------TRRLQWEKRVPTPH---TSYSAFLDAVCELVEEADQRFG----VKGSVGIG 87 (327)
T ss_dssp CEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCC---SCHHHHHHHHHHHHHHHHHHHT----SCCEEEEE
T ss_pred ceEEEEEECCCEEEEEEEeC---------CCCEEEEEEecCCC---CCHHHHHHHHHHHHHHHHHhcC----CccEEEEE
Confidence 48999999999999999997 89999988877543 2678899999999998877543 47899999
Q ss_pred ccCCCChhh----------------HHHHHHhh-----------------------------------------------
Q 023529 102 VSGVNHPTD----------------QQRILNWL----------------------------------------------- 118 (281)
Q Consensus 102 ~~G~~~~~~----------------~~~l~~~~----------------------------------------------- 118 (281)
+||+++++. .+.+++.+
T Consensus 88 ~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pv~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~ 167 (327)
T 2ap1_A 88 IPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVLNGK 167 (327)
T ss_dssp ESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHTSCEEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSSEEEEEEETTE
T ss_pred eeeeEECCCCEEEccCCCccCCCChHHHHHHHHCCCEEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCcEEEEEEECCE
Confidence 999965421 12233211
Q ss_pred -------cHHHHHHHHHHHHHHhhc----------CCCCCchhHHHHHHhcCCCChhhHHHHhccCCChHHhhcchHHHH
Q 023529 119 -------SGYGIAAQALTAVIRAYD----------GRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVV 181 (281)
Q Consensus 119 -------sg~~iG~~~l~~~~~~~d----------g~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~a~~v~ 181 (281)
.+.++|| +...++ |..|.|+.. .|++.+ .|..++.+.+..... . ...++.|+
T Consensus 168 l~~G~~g~aGE~Gh-----~~~~~~~~~~~~~~~~g~~c~cG~~-gcle~~--~s~~~l~~~~~~~~~-~--~~~~~~i~ 236 (327)
T 2ap1_A 168 PITGQSYITGEFGH-----MRLPVDALTLMGFDFPLRRCGCGQM-GCIENY--LSGRGFAWLYQHYYD-Q--SLQAPEII 236 (327)
T ss_dssp EECCTTSCTTCGGG-----SBCCHHHHHHHCTTSCCCBCTTSCB-SBTHHH--HSHHHHHHHHHHHHC-C--CCCHHHHH
T ss_pred EeecCCCccccccc-----EEEecCcccccccccCCCcCCCCch-hhHHHH--hCHHHHHHHHHHhcC-C--CCCHHHHH
Confidence 1112333 222222 444555433 333444 266666654432100 0 12368899
Q ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCC----Cce
Q 023529 182 SCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYP----GAV 257 (281)
Q Consensus 182 ~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p----~~~ 257 (281)
+++++||+.|.+++++++++|+.++.++++.|| |+.|||+|++....+ + +. .+++.++++.+ .++
T Consensus 237 ~~a~~gd~~a~~il~~~~~~La~~i~~l~~~l~--------p~~IvlgG~i~~~~~-~-~~-~l~~~l~~~~~~~~~~~~ 305 (327)
T 2ap1_A 237 ALWEQGDEQAHAHVERYLDLLAVCLGNILTIVD--------PDLLVIGGGLSNFTA-I-TT-QLAERLPRHLLPVARAPR 305 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGSTH-H-HH-SSGGGSGGGSCTTCCCCE
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeChhhcchh-H-HH-HHHHHHHHhhccccCCCE
Confidence 999999999999999999999999999999999 999999999998764 2 44 48888877643 455
Q ss_pred eeCC---CCChhHHHHHHHHh
Q 023529 258 PIRP---KVEPAVGAALLAWN 275 (281)
Q Consensus 258 i~~~---~~~~~~GAa~la~~ 275 (281)
|..+ .+++++||++++++
T Consensus 306 i~~s~~~~~a~~~GAa~lal~ 326 (327)
T 2ap1_A 306 IERARHGDAGGMRGAAFLHLT 326 (327)
T ss_dssp EEECSCTTTHHHHHHHHTTSC
T ss_pred EEEcCCCCcHHHHHHHHHHhh
Confidence 5543 45689999998764
No 15
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=99.86 E-value=2.1e-22 Score=183.37 Aligned_cols=234 Identities=16% Similarity=0.102 Sum_probs=153.3
Q ss_pred hhcCCCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 023529 16 EESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (281)
Q Consensus 16 ~~~~~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i 95 (281)
+......|+||||+|+|+++++++|+ +|+++.+.+.++... .+++++++.+.+.++++++ +..++
T Consensus 13 ~~~~~~~~~lgidiggt~i~~~l~d~---------~g~il~~~~~~~~~~--~~~~~~~~~i~~~i~~~~~----~~~~i 77 (321)
T 3r8e_A 13 ENLYFQGMILGIDVGGTSVKFGLVTP---------EGEIQNATRFMTADW--VNGIGFVESMKLEIGNFLK----QYPIV 77 (321)
T ss_dssp ------CCEEEEECCSSEEEEEEECT---------TCCEEEEEEEEHHHH--HTTTCHHHHHHHHHHHHHH----HCTTC
T ss_pred hhhccCcEEEEEEECCCEEEEEEEcC---------CCcEEEEEEEeCCCC--CCHHHHHHHHHHHHHHHHh----ccCCe
Confidence 34445679999999999999999997 899999888764322 3567888999999998886 23578
Q ss_pred ceeEEcccCCCChhh-----------H------HHHHHhh-----------cHHHHHHHHHHHH------H---------
Q 023529 96 RAVCLAVSGVNHPTD-----------Q------QRILNWL-----------SGYGIAAQALTAV------I--------- 132 (281)
Q Consensus 96 ~~Igig~~G~~~~~~-----------~------~~l~~~~-----------sg~~iG~~~l~~~------~--------- 132 (281)
.+||||+||+++++. | +.+++.+ ....+|....+.. +
T Consensus 78 ~gigi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG 157 (321)
T 3r8e_A 78 KGVGIGWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIHFKIENDAKCAALGEYYFGENKRMQTFILLALGTGVG 157 (321)
T ss_dssp CEEEEEESSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTTSEEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEE
T ss_pred eEEEEEecccEECCCCEEEeCCCCccccCCCHHHHHHHHcCCCCEEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCceE
Confidence 999999999976321 1 2233211 1111111110000 0
Q ss_pred --HhhcCCC------CCchhH------HHHHHhcCCCChhhHHHHhccCC---ChH------HhhcchHHHHHHHHhCCH
Q 023529 133 --RAYDGRG------PDTMLT------SNILSTLELSSPDELIGWTYVDP---SWA------RIAALVPVVVSCAEAGDE 189 (281)
Q Consensus 133 --~~~dg~~------~~~~l~------~~~~~~~~~~s~~~l~~~~~~~~---~~~------~~a~~a~~v~~~A~~GD~ 189 (281)
...||+. ..+.+. .+|++.+ .|..++.+.+.... ... .-....+.|++++++||+
T Consensus 158 ~gii~~G~l~~G~~g~aGEiGh~~~~~~gclE~~--~S~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~gD~ 235 (321)
T 3r8e_A 158 SGVMMNGKLFIGGRGNGTEVGHMLTTRGKSLENQ--VGINHLIAYTHEQLALDVAKKSSLHTIAELSPKVIADHAAQGDA 235 (321)
T ss_dssp EEEEETTEECCCTTSCCCCGGGCBCTTSSBSHHH--HSHHHHHHHHHHHHHHCTTCCCSGGGCSSCCHHHHHHHHHTTCH
T ss_pred EEEEECCEEecCCCCCCcccccccCCCCCcHHHh--cCHHHHHHHHHHHhhccCcccccccccccCCHHHHHHHHHcCCH
Confidence 0001100 001110 2234444 35666665443210 000 001135889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhC-----CCceeeCC---
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY-----PGAVPIRP--- 261 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~-----p~~~i~~~--- 261 (281)
.|++++++++++|+.+++++++.|| |+.|||||++....+ .|.+.+++.++++. +.++|..+
T Consensus 236 ~a~~~~~~~~~~La~~i~~l~~~ld--------P~~IvlgG~i~~~~~--~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~ 305 (321)
T 3r8e_A 236 LALAVWADIGTIIGESLVNIVRVMD--------LNNILLGGGISGAFD--YFVPNLKKAMLEHLPTYYTDDMYIGKATLE 305 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEESGGGGGHH--HHHHHHHHHHHHHSCHHHHTTCEEEECSSG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEeChhcccch--HHHHHHHHHHHHhcccccCCCCEEEEcCCC
Confidence 9999999999999999999999999 999999999998766 28999999999875 24566654
Q ss_pred CCChhHHHHHHHHhh
Q 023529 262 KVEPAVGAALLAWNS 276 (281)
Q Consensus 262 ~~~~~~GAa~la~~~ 276 (281)
.+++++||++++++.
T Consensus 306 ~~a~~~GAa~l~~~~ 320 (321)
T 3r8e_A 306 NDAGLLGAAGLIMEA 320 (321)
T ss_dssp GGHHHHHHHHHHHC-
T ss_pred CcHHHHHHHHHHHhh
Confidence 356899999999875
No 16
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=99.86 E-value=7.9e-22 Score=184.89 Aligned_cols=229 Identities=11% Similarity=0.058 Sum_probs=161.6
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeE
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Ig 99 (281)
...|++|||+|+|+++++++|+ +|+++.+.+.+.. . .+++++++.+.+.+++++++.+.+..++.+||
T Consensus 83 ~~~~~lgiDiG~t~i~~~l~d~---------~G~il~~~~~~~~-~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gig 150 (406)
T 1z6r_A 83 EAWHYLSLRISRGEIFLALRDL---------SSKLVVEESQELA-L--KDDLPLLDRIISHIDQFFIRHQKKLERLTSIA 150 (406)
T ss_dssp TTCEEEEEEEETTEEEEEEEET---------TCCEEEEEEEECC-S--SCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEE
T ss_pred CccEEEEEEEcCCEEEEEEEcC---------CCCEEEEEEecCC-C--CCHHHHHHHHHHHHHHHHHhcCCCcCceeEEE
Confidence 3469999999999999999997 8999988877652 1 46688899999999999998877777899999
Q ss_pred EcccCCCChh-----------hH------HHHHHhh---------------cHHHHHH----------------------
Q 023529 100 LAVSGVNHPT-----------DQ------QRILNWL---------------SGYGIAA---------------------- 125 (281)
Q Consensus 100 ig~~G~~~~~-----------~~------~~l~~~~---------------sg~~iG~---------------------- 125 (281)
||+||+++++ .| +.+++.+ +.+|.|.
T Consensus 151 i~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pv~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~ 230 (406)
T 1z6r_A 151 ITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVIT 230 (406)
T ss_dssp EEESSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEE
T ss_pred EEeecCEeCCCCEEecCCCCCCccCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEE
Confidence 9999985432 11 2232211 0001100
Q ss_pred ------------HHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhcc----CCCh--HHhhcchHHHHHHHHhC
Q 023529 126 ------------QALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV----DPSW--ARIAALVPVVVSCAEAG 187 (281)
Q Consensus 126 ------------~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~----~~~~--~~~a~~a~~v~~~A~~G 187 (281)
.-++|+...++|..|.|+.. +|++.+ .|..++.+.+.. .... ..-....+.|++++++|
T Consensus 231 ~G~l~~G~~g~AGEiGh~~v~~~g~~c~cG~~-gclE~~--~S~~al~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~g 307 (406)
T 1z6r_A 231 DGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNH-GCLETI--ASVDSILELAQLRLNQSMSSMLHGQPLTVDSLCQAALRG 307 (406)
T ss_dssp TTEETTTTSSCCBCGGGSBSCTTSCBCTTSCB-SBTHHH--HSHHHHHHHHHHHHTTCTTCGGGSSCCCHHHHHHHHHTT
T ss_pred CCEEeecCCCcCccCCceEecCCCCCCCCCCc-cchHHH--cCHHHHHHHHHHhhhcccccccCcccCCHHHHHHHHHcC
Confidence 00123444455655555543 344544 366677654432 1000 00012368899999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhC-----CCceeeC--
Q 023529 188 DEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY-----PGAVPIR-- 260 (281)
Q Consensus 188 D~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~-----p~~~i~~-- 260 (281)
|+.|.+++++++++|+.++.++++.|| |+.|||+|++....+ + |.+.+++.+.++. ..++|..
T Consensus 308 D~~a~~~l~~~~~~L~~~i~~l~~~ld--------P~~IvlgG~i~~~~~-~-l~~~i~~~l~~~~~~~~~~~~~i~~s~ 377 (406)
T 1z6r_A 308 DLLAKDIITGVGAHVGRILAIMVNLFN--------PQKILIGSPLSKAAD-I-LFPVISDSIRQQALPAYSQHISVESTQ 377 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGHH-H-HHHHHHHHHHHHSCHHHHTTCEEEECS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEeCccchhhH-H-HHHHHHHHHHHhcccccCCCcEEEEeC
Confidence 999999999999999999999999999 999999999998766 3 8899999998873 2345554
Q ss_pred -CCCChhHHHHHHH
Q 023529 261 -PKVEPAVGAALLA 273 (281)
Q Consensus 261 -~~~~~~~GAa~la 273 (281)
..+++++||+++.
T Consensus 378 l~~~a~~~GAa~~~ 391 (406)
T 1z6r_A 378 FSNQGTMAGAALVK 391 (406)
T ss_dssp CCCCTTTTHHHHHH
T ss_pred CCChHHHHHHHHHH
Confidence 3567899996553
No 17
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=99.85 E-value=1.6e-21 Score=174.38 Aligned_cols=217 Identities=15% Similarity=0.106 Sum_probs=148.2
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEcc
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig~ 102 (281)
|++|||+|+|+++++++|+ +|+++.+.+.++.+. .+++++++.+.+.+++++.+ +.+||+|+
T Consensus 2 ~~lgidiggt~~~~~l~d~---------~g~il~~~~~~~~~~--~~~~~~~~~i~~~i~~~~~~-------~~~igi~~ 63 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGA---------DGQIRDRRELPTPAS--QTPEALRDALSALVSPLQAH-------AQRVAIAS 63 (289)
T ss_dssp CEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCSS--CCHHHHHHHHHHHHTTTGGG-------CSEEEEEE
T ss_pred eEEEEEeCCCEEEEEEECC---------CCCEEEEEEecCCCC--CCHHHHHHHHHHHHHHHHhh-------CCEEEEEe
Confidence 7899999999999999997 899999888776433 36888888888888766542 45899999
Q ss_pred cCCCChhh-----------H------HHHHHhh----------cHHHHHHHH----------------------------
Q 023529 103 SGVNHPTD-----------Q------QRILNWL----------SGYGIAAQA---------------------------- 127 (281)
Q Consensus 103 ~G~~~~~~-----------~------~~l~~~~----------sg~~iG~~~---------------------------- 127 (281)
||+++++. | +.+++.+ ....+|...
T Consensus 64 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaa~~e~~~g~~~~~~~v~l~~GtGiG~gii~~G~l 143 (289)
T 2aa4_A 64 TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVSGCKL 143 (289)
T ss_dssp SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHTSCTTCCCEEEEEESSSEEEEEEETTEE
T ss_pred ccceeCCCCEEEeCCCCCcccCCChHHHHHHHHCCCEEEechHHHHHHHHHHhCCCCCceEEEEEeCccEEEEEEECCEE
Confidence 99864321 1 1222221 000011000
Q ss_pred ----------HHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccCCChHHhhcchHHHHHHHHhCCHHHHHHHHH
Q 023529 128 ----------LTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKILQD 197 (281)
Q Consensus 128 ----------l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~a~~v~~~A~~GD~~A~~il~~ 197 (281)
++|+..+++|..|.|+.. +|++.+ .|..++.+.+.... -....+.|++++++||+.|++++++
T Consensus 144 ~~G~~g~aGE~Gh~~~~~~g~~c~cG~~-gcle~~--~s~~~l~~~~~~~~----~~~~~~~v~~~a~~gd~~a~~i~~~ 216 (289)
T 2aa4_A 144 LTGPGGLAGHIGHTLADPHGPVCGCGRT-GCVEAI--ASGRGIAAAAQGEL----AGADAKTIFTRAGQGDEQAQQLIHR 216 (289)
T ss_dssp ECCTTSCCCCGGGSBSCTTSCBCTTSCB-SBHHHH--HSHHHHHHTCCGGG----TTCCHHHHHHHHHTTCHHHHHHHHH
T ss_pred eeCCCCCCccCCcEEECCCCCcCCCCCc-hhHHHH--hCHHHHHHHHHHhc----cCCCHHHHHHHHHcCCHHHHHHHHH
Confidence 112323333333334332 234444 35666665433211 0124688999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCC--CceeeC---CCCChhHHHHHH
Q 023529 198 SVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYP--GAVPIR---PKVEPAVGAALL 272 (281)
Q Consensus 198 aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p--~~~i~~---~~~~~~~GAa~l 272 (281)
++++|+.++.++++.|| |+.|+|+|++. ..+ + |.+.+++.++++.+ .+++.. ..+++++||+++
T Consensus 217 ~~~~L~~~i~~l~~~l~--------p~~ivlgG~~~-~~~-~-~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l 285 (289)
T 2aa4_A 217 SARTLARLIADIKATTD--------CQCVVVGGSVG-LAE-G-YLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALL 285 (289)
T ss_dssp HHHHHHHHHHHHHHHHC--------CSEEEEEHHHH-TST-T-HHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC--------CCEEEEeCccc-ccH-H-HHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHH
Confidence 99999999999999999 99999999999 545 3 88999999987632 334443 245689999999
Q ss_pred HHh
Q 023529 273 AWN 275 (281)
Q Consensus 273 a~~ 275 (281)
+++
T Consensus 286 ~~~ 288 (289)
T 2aa4_A 286 AQG 288 (289)
T ss_dssp HHC
T ss_pred Hhc
Confidence 864
No 18
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=99.85 E-value=9.3e-21 Score=171.86 Aligned_cols=217 Identities=15% Similarity=0.160 Sum_probs=140.9
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igi 100 (281)
..|++|||+|+|+++++++|+ +|+++.+.+.++.. ..++.+++.+.+.+++++++.+ .++.+|||
T Consensus 6 ~~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~---~~i~gigi 70 (310)
T 3htv_A 6 HNVVAGVDMGATHIRFCLRTA---------EGETLHCEKKRTAE---VIAPGLVSGIGEMIDEQLRRFN---ARCHGLVM 70 (310)
T ss_dssp EEEEEEEEECSSEEEEEEEET---------TSCEEEEEEEEHHH---HHTTCHHHHHHHHHHHHHHHHT---EEEEEEEE
T ss_pred CCEEEEEEeCCCEEEEEEECC---------CCCEEEEEEecCcc---ccHHHHHHHHHHHHHHHHHhcC---CCeeEEEE
Confidence 469999999999999999997 99999887765422 1235677888888888877654 25889999
Q ss_pred cccCCCChhh-----------H--------HHHHHhh-------------------------------------------
Q 023529 101 AVSGVNHPTD-----------Q--------QRILNWL------------------------------------------- 118 (281)
Q Consensus 101 g~~G~~~~~~-----------~--------~~l~~~~------------------------------------------- 118 (281)
|+||+++++. + +.+++.+
T Consensus 71 ~~pG~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~~pv~v~NDanaaa~~e~~~~~~~~~~~~~v~~GtGiG~gii~ 150 (310)
T 3htv_A 71 GFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWM 150 (310)
T ss_dssp EESSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHTSCEEEEEHHHHHHHHHHHHTTCTTSCEEEEEESSSEEEEEEE
T ss_pred eccccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhCCCEEEeeHHHHHHHHHHhhcccCCceEEEEEeceeEEEEEEE
Confidence 9999976421 1 1122211
Q ss_pred ----------cHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHhcCCCChhhHHHHhccCCChHHhhcchHHHHHHHHhCC
Q 023529 119 ----------SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGD 188 (281)
Q Consensus 119 ----------sg~~iG~~~l~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~a~~v~~~A~~GD 188 (281)
.+.++|| +....+|..|.|+. .+|+|.+ .|..++.++...... .. ..+.+++++ +||
T Consensus 151 ~G~l~~G~~g~aGEiGh-----~~v~~~g~~C~cG~-~GclE~~--~S~~al~~~~~~~~~--~~--~~~~~~~~~-~~d 217 (310)
T 3htv_A 151 NGAPWTGAHGVAGELGH-----IPLGDMTQHCACGN-PGCLETN--CSGMALRRWYEQQPR--NY--PLRDLFVHA-ENA 217 (310)
T ss_dssp TTEEECCSSSCCCC---------------------------CCS--SSHHHHHHHHTTSCC--SS--CGGGHHHHH-TTC
T ss_pred CCEEeecCCCCceeCcc-----eEeCCCCCcCCCCC-Cceehhh--hCHHHHHHHHHhccC--CC--CHHHHHHHH-cCC
Confidence 1123444 44556776666664 4677777 588888876654321 11 235677766 589
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhC--C----CceeeCC-
Q 023529 189 EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY--P----GAVPIRP- 261 (281)
Q Consensus 189 ~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~--p----~~~i~~~- 261 (281)
+.+.+++++++ ..++++++.|| |+.|||||+++...+ + +.+.+.+.++++. | .++|..+
T Consensus 218 ~~~~~~~~~~a----~~la~l~~~~d--------P~~IvlgG~v~~~~~-~-~~~~l~~~l~~~~~~~~~~~~~~i~~s~ 283 (310)
T 3htv_A 218 PFVQSLLENAA----RAIATSINLFD--------PDAVILGGGVMDMPA-F-PRETLVAMTQKYLRRPLPHQVVRFIAAS 283 (310)
T ss_dssp HHHHHHHHHHH----HHHHHHHHHHC--------CSEEEEECTTTTSTT-C-CHHHHHHHHHHTSCTTTTTTTCEEEECC
T ss_pred hHHHHHHHHHH----HHHHHHHHhhC--------CCEEEEeCchhccch-h-HHHHHHHHHHHHhhcccccCCcEEEEcC
Confidence 98887776654 56788999999 999999999998876 2 7899999988764 2 3455543
Q ss_pred --CCChhHHHHHHHHhhhhc
Q 023529 262 --KVEPAVGAALLAWNSFMN 279 (281)
Q Consensus 262 --~~~~~~GAa~la~~~~~~ 279 (281)
.+++++||++++++.+..
T Consensus 284 lg~~ag~~GAa~la~~~~~~ 303 (310)
T 3htv_A 284 SSDFNGAQGAAILAHQRFLP 303 (310)
T ss_dssp CCTTHHHHHHHHHHHHHHCC
T ss_pred CCCcHHHHHHHHHHHHHhhc
Confidence 467899999999987643
No 19
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=99.81 E-value=6.4e-20 Score=164.34 Aligned_cols=217 Identities=12% Similarity=0.076 Sum_probs=141.0
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEcc
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig~ 102 (281)
+++|||+|||+++++++|+ +|+++.+.+.++. .+++++++.+.+.+++ .++.+||+|+
T Consensus 5 ~~lgidiggt~i~~~l~d~---------~g~il~~~~~~~~----~~~~~~~~~i~~~i~~---------~~i~gigi~~ 62 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTP---------DGKILDKTSISTP----ENLEDLLAWLDQRLSE---------QDYSGIAMSV 62 (292)
T ss_dssp CEEEEEEETTEEEEEEECT---------TCCEEEEEEECCC----SSHHHHHHHHHHHHTT---------SCCSEEEEEE
T ss_pred EEEEEEECCCEEEEEEECC---------CCCEEEEEEEeCC----CCHHHHHHHHHHHHHh---------CCCcEEEEEe
Confidence 6999999999999999997 8999998887653 2567777666665543 4688999999
Q ss_pred cCCCChhh-----------H------HHHHHhh----------cHHHHHHHH-HH---HHH-----------HhhcCCC-
Q 023529 103 SGVNHPTD-----------Q------QRILNWL----------SGYGIAAQA-LT---AVI-----------RAYDGRG- 139 (281)
Q Consensus 103 ~G~~~~~~-----------~------~~l~~~~----------sg~~iG~~~-l~---~~~-----------~~~dg~~- 139 (281)
||+++++. + +.+ +.+ ....+|... -+ .++ ...||+.
T Consensus 63 pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~~pv~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtGiG~giv~~G~l~ 141 (292)
T 2gup_A 63 PGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQLPVHLENDANCVGLSELLAHPELENAACVVIGTGIGGAMIINGRLH 141 (292)
T ss_dssp SSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGCCCEEEEEHHHHHHHHHHHHCTTCSSEEEEEESSSEEEEEEETTEEE
T ss_pred cCcccCCCCEEEecCCCCcccCCCHHHHH-HHcCCCEEEechHHHHHHHHHHhcCCCCeEEEEEECCceEEEEEECCEEE
Confidence 99865321 1 223 322 111111110 00 000 0001100
Q ss_pred ---------------CCchhHHHHHHhcCCCChhhHHHHhccCCChHHhhcchHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 023529 140 ---------------PDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKILQDSVEELAL 204 (281)
Q Consensus 140 ---------------~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~a~~v~~~A~~GD~~A~~il~~aa~~l~~ 204 (281)
..|+....|++.+ .|..++.+.+........ ...+.|++++++||+.|.+++++++++|+.
T Consensus 142 ~G~~g~aGEiGh~~~~~~~~~~gcle~~--~s~~~l~~~~~~~~~~~~--~~~~~v~~~a~~gd~~a~~i~~~~~~~L~~ 217 (292)
T 2gup_A 142 RGRHGLGGEFGYMTTLAPAEKLNNWSQL--ASTGNMVRYVIEKSGHTD--WDGRKIYQEAAAGNILCQEAIERMNRNLAQ 217 (292)
T ss_dssp CCTTSCTTCGGGCBSSCCSSSCCBHHHH--HSHHHHHHHHHHHHSSCC--CCHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCccceeEEeccCCCCCCcHHHh--cCHHHHHHHHHHhhCCCC--CCHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 0010011333443 255666654432100001 135789999999999999999999999999
Q ss_pred HHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhC-------CCceeeC---CCCChhHHHHHHHH
Q 023529 205 SVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY-------PGAVPIR---PKVEPAVGAALLAW 274 (281)
Q Consensus 205 ~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~-------p~~~i~~---~~~~~~~GAa~la~ 274 (281)
++.++++.|| |+.|||+|++.. .+ + |.+.+++.++++. +.+++.. ..+++++||+++++
T Consensus 218 ~i~~l~~~l~--------p~~IvlgG~i~~-~~-~-~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 286 (292)
T 2gup_A 218 GLLNIQYLID--------PGVISLGGSISQ-NP-D-FIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWL 286 (292)
T ss_dssp HHHHHHHHHC--------CSEEEEESGGGG-CH-H-HHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHH
T ss_pred HHHHHHHHhC--------CCEEEEeCcccc-ch-H-HHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHH
Confidence 9999999999 999999999975 44 3 7899999987753 1244443 24568999999998
Q ss_pred hhh
Q 023529 275 NSF 277 (281)
Q Consensus 275 ~~~ 277 (281)
++.
T Consensus 287 ~~~ 289 (292)
T 2gup_A 287 QEE 289 (292)
T ss_dssp HHT
T ss_pred Hhc
Confidence 764
No 20
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=99.78 E-value=2.5e-19 Score=163.71 Aligned_cols=95 Identities=9% Similarity=0.023 Sum_probs=76.1
Q ss_pred chHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCcc-EEEEcCcccCcchhhhH-HHHHHHHHhh
Q 023529 176 LVPVVVSCAEAG-DEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFP-LVMVGGVLEANRRWDIG-REVVKCILRD 252 (281)
Q Consensus 176 ~a~~v~~~A~~G-D~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~-IvLgGgv~~~~~~~~l~-~~i~~~l~~~ 252 (281)
.++.|+++|++| |+.|++++++++++|+.+++++++.|| |+. |||+||++....++ |. +.|++.+.++
T Consensus 225 ~~~~i~~~a~~G~D~~A~~~~~~~~~~Lg~~i~~l~~~l~--------P~~gvvigGGi~~~~~~~-l~~~~~~~~~~~~ 295 (332)
T 1sz2_A 225 KPKDITERALADSCTDCRRALSLFCVIMGRFGGNLALNLG--------TFGGVFIAGGIVPRFLEF-FKASGFRAAFEDK 295 (332)
T ss_dssp CHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHT--------CTTEEEEECSSSGGGHHH-HHHSSHHHHHHCC
T ss_pred CHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCeEEEEEChhhhhHHHH-hccHHHHHHHHhc
Confidence 368899999999 999999999999999999999999999 998 99999999764433 44 4677777642
Q ss_pred --C------CCceeeCCCCChhHHHHHHHHhhhhc
Q 023529 253 --Y------PGAVPIRPKVEPAVGAALLAWNSFMN 279 (281)
Q Consensus 253 --~------p~~~i~~~~~~~~~GAa~la~~~~~~ 279 (281)
+ ..+.+...++++++||++++++.+.+
T Consensus 296 ~~~~~~~~~~~i~~~~~~~a~l~GAa~l~~~~~~~ 330 (332)
T 1sz2_A 296 GRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGH 330 (332)
T ss_dssp GGGHHHHTTCCEEEECCSCHHHHHHHHHHHHHTTC
T ss_pred CchhhHHhCceEEEEECCchhHHHHHHHHHHhhhc
Confidence 2 12333445567999999999887654
No 21
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=99.76 E-value=1.6e-18 Score=156.56 Aligned_cols=200 Identities=12% Similarity=0.136 Sum_probs=133.4
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEc
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig 101 (281)
.|++|||+|||+++++++|+ +|+++.+.+.++. +++++++.+.+.++ + .++.+||||
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~t~-----~~~~~l~~i~~~~~----~-----~~i~gigi~ 59 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE---------DGTIIDRIEFPTX-----MPDETIEXVIQYFS----Q-----FSLQAIGIG 59 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT---------TSCEEEEEEEECC-----CHHHHHHHHHHHHT----T-----SCCSEEEEE
T ss_pred cEEEEEEECcceeEEEEEEC---------CCcEEEEEEecCC-----ChHHHHHHHHHHhc----c-----CCceEEEEE
Confidence 48999999999999999997 9999998887752 45666666655443 1 368999999
Q ss_pred ccCCCChhh---------------------HHHHHHhh------------------------------------------
Q 023529 102 VSGVNHPTD---------------------QQRILNWL------------------------------------------ 118 (281)
Q Consensus 102 ~~G~~~~~~---------------------~~~l~~~~------------------------------------------ 118 (281)
+||+++++. .+.+++.+
T Consensus 60 ~pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtGiG~gi 139 (302)
T 3epq_A 60 SFGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXIPVGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTGIGAGA 139 (302)
T ss_dssp ECSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEE
T ss_pred eceeeccccccccccEEecCCCCCccCCChHHHHHHHhCCCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCceEEEE
Confidence 999965321 12233221
Q ss_pred -------c---HHHHHHHHHHHHHHhhc---CCCCCchhHHHHHHhcCCCChhhHHHHhccCCChHHhhcchHHHHHHHH
Q 023529 119 -------S---GYGIAAQALTAVIRAYD---GRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAE 185 (281)
Q Consensus 119 -------s---g~~iG~~~l~~~~~~~d---g~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~a~~v~~~A~ 185 (281)
. +.++|| +....+ +..|.|+..+.|+|.+ .|..++.+.+.... .++
T Consensus 140 i~~G~l~~G~~agEiGh-----~~v~~~~~~~~~~~C~~~~gclE~~--~S~~al~~~~~~~~--~~~------------ 198 (302)
T 3epq_A 140 IVEGRLLQGLSHPEMGH-----IYIRRHPDDVYQGXCPYHGDCFEGL--ASGPAIEARWGXKA--ADL------------ 198 (302)
T ss_dssp EETTEECCSSSCCCGGG-----CCCCCCTTCCCCCSBTTTBSSHHHH--HSHHHHHHHHSSCG--GGG------------
T ss_pred EECCEEcccCCCCccce-----EEEecCCCCCcCcccCCCCcchhhh--CCHHHHHHHhhccc--ccc------------
Confidence 0 112333 322222 2223343322456655 46677765543221 111
Q ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhC------C-----
Q 023529 186 AGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY------P----- 254 (281)
Q Consensus 186 ~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~------p----- 254 (281)
+.+.+++++++++|+.+++++++.|| |+.|||||+++...+ |++.+++.++++. |
T Consensus 199 ---~~~~~~~~~~~~~La~~i~nl~~~ld--------Pe~IviGGgi~~~~~---l~~~i~~~l~~~~~~~~~~~~~~~~ 264 (302)
T 3epq_A 199 ---SDIAQVWELEGYYIAQALAQYILILA--------PXXIILGGGVMQQXQ---VFSYIYQYVPKIMNSYLDFSELSDD 264 (302)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHTC--------CSCEEEESSGGGCTH---HHHHHHHHHHHHHTTCSCCGGGTTT
T ss_pred ---cchHHHHHHHHHHHHHHHHHHHHHHC--------chhhhcCchhhhhHH---HHHHHHHHHHHHHhhhccCcccccc
Confidence 01357889999999999999999999 999999999998753 7889999888763 2
Q ss_pred -CceeeCC---CCChhHHHHHHHHhhhhc
Q 023529 255 -GAVPIRP---KVEPAVGAALLAWNSFMN 279 (281)
Q Consensus 255 -~~~i~~~---~~~~~~GAa~la~~~~~~ 279 (281)
.+.|..+ ++++++||++++++.+.+
T Consensus 265 ~~~~I~~s~lg~~a~l~GAa~l~~~~~~~ 293 (302)
T 3epq_A 265 ISDYIVPPRLGSNAGIIGTLVLAHQALQA 293 (302)
T ss_dssp GGGTEECCTTGGGHHHHHHHHHHHHHHHH
T ss_pred cCceEEECCcCChHHHHHHHHHHHHHHHH
Confidence 1235443 456899999999987653
No 22
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=99.69 E-value=1e-16 Score=149.17 Aligned_cols=229 Identities=15% Similarity=0.076 Sum_probs=148.8
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHH---HHHHHHHHHHcCCCcccccee
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETI---EKVMADALLKSGSNRSAVRAV 98 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i---~~~i~~~l~~~g~~~~~i~~I 98 (281)
.+++|||+|+|+++++++|. + +++.+.+.++......+++++++++ .+.+.+++++.+.+..++.+|
T Consensus 2 ~~vlgidiGgt~ik~al~d~---------~-~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~gI 71 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFED---------E-RMVKMQNFSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAF 71 (381)
T ss_dssp CEEEEEEECSSEEEEEEEET---------T-EEEEEEEEECCHHHHHTCSSGGGGHHHHHHHHHHHHHTTTCCGGGCSEE
T ss_pred CeEEEEECCccceeEEEEec---------c-hheeeeecccCcccccchhhHHHHHHHHHHHHHHHHHHcCCCccCceEE
Confidence 48999999999999999995 4 8888877764311000222344555 778888888777777789999
Q ss_pred EEcccCCCChhh--------------------------HHH----HHHhh----------c---------HHHH------
Q 023529 99 CLAVSGVNHPTD--------------------------QQR----ILNWL----------S---------GYGI------ 123 (281)
Q Consensus 99 gig~~G~~~~~~--------------------------~~~----l~~~~----------s---------g~~i------ 123 (281)
+|+||++++.. ... +++.+ . .+.+
T Consensus 72 -i~~pG~vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~~~Pv~v~NDan~~~~~~~a~aaalp~~~r~ 150 (381)
T 1saz_A 72 -VSRGGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSETGVPAYVVDPVVVDEMEDVARVSGHPNYQRK 150 (381)
T ss_dssp -EEECCSCSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHCCCEEEESCTTBCCCCGGGTBCSSTTCBCC
T ss_pred -EecCCCCCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhcCCCEEEeCCCccccCcHHHHHcCCcchhhh
Confidence 99999865320 001 12211 2 2222
Q ss_pred -----------HH-HHHHH----------------------------------------HHHhhcCCCCCchh-HHHHHH
Q 023529 124 -----------AA-QALTA----------------------------------------VIRAYDGRGPDTML-TSNILS 150 (281)
Q Consensus 124 -----------G~-~~l~~----------------------------------------~~~~~dg~~~~~~l-~~~~~~ 150 (281)
+. ..... +....+|. |.|.. ...|++
T Consensus 151 ~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGiG~g~i~~G~~~~G~~g~agEGh~~~~~~g~-c~cg~l~~gc~e 229 (381)
T 1saz_A 151 SIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRKGRVIDVNNALDGDGPFTPERSGT-LPLTQLVDLCFS 229 (381)
T ss_dssp CCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSEEEEEEETTEEEEECCGGGTCSSCCSSCCCS-CCHHHHHHHHTS
T ss_pred cccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCcEEEEEECCEEEEecCCCCCCcceeeccCCC-CCCcHHHHHHHH
Confidence 32 11100 00000111 12221 134445
Q ss_pred hcCCCChhhHHHHhccCCChHHh--hcchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc--ccCCCCCCCCccE
Q 023529 151 TLELSSPDELIGWTYVDPSWARI--AALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRL--SLSGEDGKHSFPL 226 (281)
Q Consensus 151 ~~~~~s~~~l~~~~~~~~~~~~~--a~~a~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l--~~~~~~~~~p~~I 226 (281)
.+ .|..++...++........ ....+.|++++++||+.|++++++++++|+..+.++++.| | |+.|
T Consensus 230 ~~--~S~~~l~~~~~~~~g~~~~~~~~~~~~i~~~a~~gd~~a~~~l~~~~~~la~~i~~l~~~l~~~--------p~~I 299 (381)
T 1saz_A 230 GK--FTYEEMKKRIVGNGGLVAYLGTSDAREVVRRIKQGDEWAKRVYRAMAYQIAKWIGKMAAVLKGE--------VDFI 299 (381)
T ss_dssp SC--CCTTGGGSTTTTSCTHHHHHSCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTC--------CSEE
T ss_pred hC--CCHHHHHHHHHhccCccccccCCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CCEE
Confidence 44 4666666555432211000 1246889999999999999999999999999999999999 8 9999
Q ss_pred EEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCC---CChhHHHHHHHHh
Q 023529 227 VMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPK---VEPAVGAALLAWN 275 (281)
Q Consensus 227 vLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~---~~~~~GAa~la~~ 275 (281)
||+||+....+ + +.+.+++.+.+..| +.+.+.. +++++||+.++.+
T Consensus 300 vlgGgi~~~~~-~-l~~~i~~~l~~~~~-~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 300 VLTGGLAHEKE-F-LVPWITKRVSFIAP-VLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp EEEEGGGGCTT-T-HHHHHHHHHTTTSC-EEEEEBCCHHHHHHHHHHHHHTT
T ss_pred EEeCcCccChH-H-HHHHHHHHHHhhcC-eEEEecCcchhHHHHHHHHHHcC
Confidence 99999998865 3 88999999987653 4454433 3689999998865
No 23
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=99.67 E-value=8.3e-18 Score=155.93 Aligned_cols=90 Identities=17% Similarity=0.114 Sum_probs=72.5
Q ss_pred chHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcC-cccCcchhhhHH--HHHHHHHhh
Q 023529 176 LVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGG-VLEANRRWDIGR--EVVKCILRD 252 (281)
Q Consensus 176 ~a~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGg-v~~~~~~~~l~~--~i~~~l~~~ 252 (281)
.++.|+++|++||+.|++++++++++|+..+.++++.|| |+.|||+|| +... +. |++ .+++.++++
T Consensus 266 ~~~~i~~~a~~gD~~a~~~l~~~~~~L~~~i~~l~~~l~--------p~~IvlgGG~~~~~-~~--~~~~~~i~~~l~~~ 334 (373)
T 2q2r_A 266 SAGEIAKLASEGDANACKAMKKYHEYLMRVGSEASMALL--------PLTIVLVGDNIVNN-AF--FYRNPQNLKEMHHE 334 (373)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEECSHHHHHT-HH--HHHSHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEeCChHhCc-hh--hhcchhHHHHHHHH
Confidence 368899999999999999999999999999999999999 999999888 5555 53 677 788877765
Q ss_pred C-C----------CceeeC---CCCChhHHHHHHHHhh
Q 023529 253 Y-P----------GAVPIR---PKVEPAVGAALLAWNS 276 (281)
Q Consensus 253 ~-p----------~~~i~~---~~~~~~~GAa~la~~~ 276 (281)
+ + .+++.. ..+++++||++++++.
T Consensus 335 ~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~~~~ 372 (373)
T 2q2r_A 335 ALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCGLDL 372 (373)
T ss_dssp HTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHHHHT
T ss_pred HhhcccchhhhhcCCcEEEEecCCchhHHHHHHHHHhc
Confidence 2 1 233332 3466899999998763
No 24
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=99.62 E-value=5.1e-16 Score=143.73 Aligned_cols=200 Identities=16% Similarity=0.103 Sum_probs=132.2
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEE-ecCCCCCccCCHHHHHHHHHH---HHHHHHHHcCCCccccc
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA-AAGCSNHNSVGEDAARETIEK---VMADALLKSGSNRSAVR 96 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~-~~~~~~~~~~~~~~~~~~i~~---~i~~~l~~~g~~~~~i~ 96 (281)
..|++|||+|||+++++++| +|+++.+. +.++.. .+++++++.+.+ .+++++. .++.
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d----------~G~il~~~~~~~~~~---~~~~~~l~~i~~~~~~i~~~~~------~~i~ 68 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQ----------GGKEIADPVVLPACA---DCLDKCLGNLVEGFKAIQAGLP------EAPV 68 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEE----------TTEECSCCEEEECCT---TCHHHHHHHHHHHHHHHHTTCS------SCCC
T ss_pred CCEEEEEEECcceEEEEEEE----------CCEEEEEEEEEECCC---CCHHHHHHHHHHHHHHHHHHhh------cCCe
Confidence 46999999999999999999 68888776 666432 277888888888 5554432 5789
Q ss_pred eeEEcccCCCChh-----------hHH-------HHHHhh----------cHHHHHHHHHH-------HHHH--h-----
Q 023529 97 AVCLAVSGVNHPT-----------DQQ-------RILNWL----------SGYGIAAQALT-------AVIR--A----- 134 (281)
Q Consensus 97 ~Igig~~G~~~~~-----------~~~-------~l~~~~----------sg~~iG~~~l~-------~~~~--~----- 134 (281)
+||||+||+++++ .|. .+++.+ ....+|..... .... .
T Consensus 69 gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~PV~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~ 148 (366)
T 3mcp_A 69 AISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYK 148 (366)
T ss_dssp EEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSCEEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCC
T ss_pred EEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCCEEEechhhHHHHHHHHhCCCcccccccccccccCCCC
Confidence 9999999997532 121 122221 11112211100 0000 0
Q ss_pred ----------------hcCCC---------CCch-----hHHHHHHhcCCCChhhHHHHhccCCChHHhhcchHHHHHHH
Q 023529 135 ----------------YDGRG---------PDTM-----LTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCA 184 (281)
Q Consensus 135 ----------------~dg~~---------~~~~-----l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~a~~v~~~A 184 (281)
.||+. +-+. -..+|+|.+ .|..++.+.+........ ....++|++++
T Consensus 149 ~~v~l~lGtGIG~givi~G~l~~G~~g~AGEiGH~~~~CG~~GclE~~--~S~~al~~~~~~~~~~~~-~~~~~~i~~~a 225 (366)
T 3mcp_A 149 NLLGVTLGTGFGAGVVIDGELLRGDNAAGGYVWCLRNKKYPEYIVEES--VSIRAVMRVYAERSGDAG-ARTPKEIFEIA 225 (366)
T ss_dssp EEEEEEESSSEEEEEEETTEECCCTTSCTTCCTTSBCSSCTTSBGGGT--SSHHHHHHHHHHHSSCCS-CCCHHHHHHHH
T ss_pred cEEEEEECCcceEEEEECCEEecCCCCCCceeecccCCCCCCcceeee--ecHHHHHHHHHHhhCCCC-CCCHHHHHHHH
Confidence 00100 0001 112345555 477777765542110000 11257899999
Q ss_pred H---hCC-HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhC
Q 023529 185 E---AGD-EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY 253 (281)
Q Consensus 185 ~---~GD-~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~ 253 (281)
+ +|| +.|++++++++++|+.+++++++.|| | .|||||++....+ .|++.+++.++++.
T Consensus 226 ~~~~~gD~~~a~~~l~~~~~~Lg~~i~nl~~~ld--------P-~IviGGgi~~~~~--~~~~~l~~~l~~~~ 287 (366)
T 3mcp_A 226 EGIRPGNREAAIAAFEELGEMAGDALASAITLID--------G-LIVIGGGLSGASK--YILPVLLKEMNAQT 287 (366)
T ss_dssp HTSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHC--------S-EEEEESGGGGGHH--HHHHHHHHHHHHHT
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHC--------C-EEEEEChhhhchH--HHHHHHHHHHHHhc
Confidence 9 999 99999999999999999999999999 9 9999999998876 38999999998864
No 25
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=99.58 E-value=7.8e-14 Score=132.29 Aligned_cols=89 Identities=8% Similarity=0.063 Sum_probs=75.1
Q ss_pred hHHHHHH-HH-----hCC-----HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCc--cEEEEcCcccCcchhhhHH
Q 023529 177 VPVVVSC-AE-----AGD-----EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSF--PLVMVGGVLEANRRWDIGR 243 (281)
Q Consensus 177 a~~v~~~-A~-----~GD-----~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~--~IvLgGgv~~~~~~~~l~~ 243 (281)
++.|++. +. .+| +.|..|++++++++|.+++++++.+| |+ .|+++||+.++++. |.+
T Consensus 342 ~~~i~~~~~~~~~~~~~d~~~~~~va~~V~~RaA~lla~~ia~i~~~~~--------~~~~~V~i~Ggv~~~~~~--~~~ 411 (451)
T 1bdg_A 342 THYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRIN--------RSEVTVGVDGSLYKFHPK--FCE 411 (451)
T ss_dssp HHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEEEESHHHHHCTT--HHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCceEEEEeCchhcCchh--HHH
Confidence 3677776 43 678 89999999999999999999999999 66 88899999998873 899
Q ss_pred HHHHHHHhhC---CCceeeCCCCChhHHHHHHHHh
Q 023529 244 EVVKCILRDY---PGAVPIRPKVEPAVGAALLAWN 275 (281)
Q Consensus 244 ~i~~~l~~~~---p~~~i~~~~~~~~~GAa~la~~ 275 (281)
.+++.+++.. +.+.+..+.+.+++||+++|+-
T Consensus 412 ~l~~~l~~~~~~~~~i~~~l~~dgs~iGAAllA~~ 446 (451)
T 1bdg_A 412 RMTDMVDKLKPKNTRFCLRLSEDGSGKGAAAIAAS 446 (451)
T ss_dssp HHHHHHHHHSCTTCEEEEEECTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCcEEEEECCCccHHHHHHHHHH
Confidence 9999999874 4455566788899999999864
No 26
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=99.43 E-value=1.6e-13 Score=121.28 Aligned_cols=212 Identities=16% Similarity=0.105 Sum_probs=116.7
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCC-CCeEE-EEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeE
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDP-LPVLA-RAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~-g~il~-~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Ig 99 (281)
.|++|||+|+|+++++++|+ + |+++. +.+.++... .+++++++.+.+.+++++++.+. ..++.+||
T Consensus 12 ~~~lgidiggt~i~~~l~dl---------~~g~i~~~~~~~~~~~~--~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~ig 79 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDL---------KKGKLLGERFRVPTPQP--ATPESVAEAVALVVAELSARPEA-PAAGSPVG 79 (267)
T ss_dssp CCEEEEEECSSEEEEEEEET---------TTTEEEEEEEEEECCSS--CCHHHHHHHHHHHHHHHHTSTTC-CCTTCCEE
T ss_pred CEEEEEEECCCEEEEEEEEC---------CCCeEEEEEEecCCCcc--CCHHHHHHHHHHHHHHHHHhccc-cCccceEE
Confidence 38999999999999999997 5 77774 334443222 46788999999999998765432 23456899
Q ss_pred EcccCCCCh-------h---hH------HHHHHhh----------cHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHhcC
Q 023529 100 LAVSGVNHP-------T---DQ------QRILNWL----------SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLE 153 (281)
Q Consensus 100 ig~~G~~~~-------~---~~------~~l~~~~----------sg~~iG~~~l~~~~~~~dg~~~~~~l~~~~~~~~~ 153 (281)
||+||+++. + .| +.+++.+ ....+|....+ .++.....+. .=.++
T Consensus 80 i~~pG~v~~g~v~~~~~l~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g------~~~~~~~~~~---~l~~G 150 (267)
T 1woq_A 80 VTFPGIIQHGVVHSAANVDKSWLNTDIDALLTARLGRPVEVINDADAAGLAEARYG------AGAGVKGTVL---VITLG 150 (267)
T ss_dssp EEESSCEETTEECCCTTSCGGGTTCBHHHHHHHHHTSCEEEEEHHHHHHHHHHHHS------TTTTCCSEEE---EEEES
T ss_pred EEccceEcCCEEEeCCCCCCCCCCCCHHHHHHHHHCCCEEEeehhHHHHHHHHHhC------CCCCCCCcEE---EEEEC
Confidence 999999541 1 11 1232222 11122221110 0110000000 00000
Q ss_pred CCChhhHH--HHhccCCCh----------HHhhcchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCC
Q 023529 154 LSSPDELI--GWTYVDPSW----------ARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGK 221 (281)
Q Consensus 154 ~~s~~~l~--~~~~~~~~~----------~~~a~~a~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~ 221 (281)
-.=..+++ ..++..... ..+... +.+. +. ...+++++++|+..++++++.||
T Consensus 151 tGIG~giv~~G~l~~GgEiGh~~v~~~~lE~~~S~-~~l~---~~-----~~~~~~~~~~l~~~l~~l~~~ld------- 214 (267)
T 1woq_A 151 TGIGSAFIFDGKLVPNAELGHLEIDGHDAETKASA-VARE---RD-----GLSWDEYSVLLQRYFSHVEFLFS------- 214 (267)
T ss_dssp SSEEEEEEETTEEETTCCGGGCEETTEEHHHHHSH-HHHH---HT-----TCCHHHHHHHHHHHHHHHHHHHC-------
T ss_pred cceEEEEEECCEEccCceeeeEEecCccHHHHhCH-HHHh---hc-----chhHHHHHHHHHHHHHHHHHHcC-------
Confidence 00000000 001100000 111100 0010 01 12478999999999999999999
Q ss_pred CCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeC-CCCChhHHHHHHHHhhhh
Q 023529 222 HSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIR-PKVEPAVGAALLAWNSFM 278 (281)
Q Consensus 222 ~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~-~~~~~~~GAa~la~~~~~ 278 (281)
|+.|||||++....+. |.+.++ . .+.+.+.. ..+++++||+.++..+-.
T Consensus 215 -P~~IvlgG~i~~~~~~--~~~~~~----~-~~~i~~s~l~~~a~~~GAa~l~~~~~~ 264 (267)
T 1woq_A 215 -PELFIVGGGISKRADE--YLPNLR----L-RTPIVPAVLRNEAGIVGAAIEIALQHK 264 (267)
T ss_dssp -CSEEEEESGGGGGGGG--TGGGCC----C-SSCEEECSCSTTHHHHHHHHHHHHHC-
T ss_pred -CCEEEEeChhhcccHH--HHHhhc----c-CceEEECCcCCcHHHHHHHHHHHhccc
Confidence 9999999999988763 666554 1 13333333 345689999999876543
No 27
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.42 E-value=3.4e-12 Score=130.58 Aligned_cols=86 Identities=17% Similarity=0.226 Sum_probs=73.7
Q ss_pred HHHHHH----HhCC-----HHHHHHHHHHHHHHHHHHHHHHHHc--ccCCCCCCCC------ccEEEEcCcccCcchhhh
Q 023529 179 VVVSCA----EAGD-----EVANKILQDSVEELALSVKAVVQRL--SLSGEDGKHS------FPLVMVGGVLEANRRWDI 241 (281)
Q Consensus 179 ~v~~~A----~~GD-----~~A~~il~~aa~~l~~~i~~lv~~l--~~~~~~~~~p------~~IvLgGgv~~~~~~~~l 241 (281)
.|++.+ ..|| +.|..+++++++++|.+++++++.+ | | +.|+++|||+++++. |
T Consensus 354 ~i~~~~~~~~~~~D~~~~~~~a~~v~~raa~llA~gia~ii~~l~~d--------p~~~~~~~~IvigGgV~~~~~~--~ 423 (917)
T 1cza_N 354 EILTRLGVEPSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDN--------KGTPRLRTTVGVDGSLYKTHPQ--Y 423 (917)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HTCSSEEEEEEEECHHHHHCSS--H
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--------CcccCcceEEEECCchhhccHH--H
Confidence 456665 3455 9999999999999999999999999 7 6 899999999999873 8
Q ss_pred HHHHHHHHHhhCCC--ceeeCCCCChhHHHHHHHH
Q 023529 242 GREVVKCILRDYPG--AVPIRPKVEPAVGAALLAW 274 (281)
Q Consensus 242 ~~~i~~~l~~~~p~--~~i~~~~~~~~~GAa~la~ 274 (281)
++.+++.+++..|. +++...++.+.+|||++|.
T Consensus 424 ~~~l~~~l~~~~~~~~~~i~~a~dgs~~GAA~laa 458 (917)
T 1cza_N 424 SRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTA 458 (917)
T ss_dssp HHHHHHHHHHHCTTEEEEEEECTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHH
Confidence 99999999988654 4566678899999999985
No 28
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=99.38 E-value=4.3e-11 Score=113.53 Aligned_cols=89 Identities=7% Similarity=-0.028 Sum_probs=74.2
Q ss_pred hHHHH-HHHH----hCC-----HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHH
Q 023529 177 VPVVV-SCAE----AGD-----EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVV 246 (281)
Q Consensus 177 a~~v~-~~A~----~GD-----~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~ 246 (281)
++.++ +.+. .+| +.|..|.+++++++|.+++++++.++. ++..|+++||+ ++++. |.+.++
T Consensus 334 ~~~il~~~~~~~~t~~D~~~v~~ia~~V~~RaA~l~A~~iaai~~~~~~------~~~~V~vdGsv-~~~p~--f~~~l~ 404 (457)
T 2yhx_A 334 XXDLFXGDQGIAXKTXMKXVVRRXLFLIAAYAFRLVVCXIXAICQKKGY------SSGHIAAXGSX-RSYSG--FSXNSA 404 (457)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC------SSEEEEEESTT-TTSTT--HHHHHH
T ss_pred HHHHHHHHhCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC------CcEEEEEECCc-ccCch--HHHHHH
Confidence 46676 6666 678 899999999999999999999999991 13899999999 88873 999999
Q ss_pred HHHHhhC-C--------CceeeCCCCChhHHHHHHHH
Q 023529 247 KCILRDY-P--------GAVPIRPKVEPAVGAALLAW 274 (281)
Q Consensus 247 ~~l~~~~-p--------~~~i~~~~~~~~~GAa~la~ 274 (281)
+.+++.. + .+.+...++.+.+|||++|.
T Consensus 405 ~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GAAl~aa 441 (457)
T 2yhx_A 405 TXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXS 441 (457)
T ss_dssp HHHHHHHCCCCSSGGGSSEEEEECCCTTTHHHHHHHH
T ss_pred HHHHHhhCcccccccCcceEEEECCCchhhhHHHHHH
Confidence 9998864 2 35666688999999999885
No 29
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.35 E-value=1.3e-11 Score=126.35 Aligned_cols=95 Identities=13% Similarity=0.133 Sum_probs=74.9
Q ss_pred HHHHHHH----hCC-----HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHH
Q 023529 179 VVVSCAE----AGD-----EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCI 249 (281)
Q Consensus 179 ~v~~~A~----~GD-----~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l 249 (281)
.|++.+. .+| +.|..|.+++++++|.+++++++.++-.......+..|+++|||.++++. |.+.+++.+
T Consensus 802 ~i~~~~~~~~~~~D~~~~~~ia~~v~~RaA~l~a~~iaai~~~~~~~~~~~~~~~~V~vdGsv~~~~p~--f~~~~~~~l 879 (917)
T 1cza_N 802 AILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPH--FSRIMHQTV 879 (917)
T ss_dssp HHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTT--HHHHHHHHH
T ss_pred HHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCccceEEEECCHHHHcCcH--HHHHHHHHH
Confidence 4777665 678 89999999999999999999999998100000001789999999999873 899999999
Q ss_pred HhhCCC--ceeeCCCCChhHHHHHHHHh
Q 023529 250 LRDYPG--AVPIRPKVEPAVGAALLAWN 275 (281)
Q Consensus 250 ~~~~p~--~~i~~~~~~~~~GAa~la~~ 275 (281)
++..|. +.+...++.+.+|||++|.-
T Consensus 880 ~~l~~~~~v~~~~~~dgsg~GAAl~aa~ 907 (917)
T 1cza_N 880 KELSPKCNVSFLLSEDGSGKGAALITAV 907 (917)
T ss_dssp HHHSTTEEEEEEECSSCSHHHHHHHHHH
T ss_pred HHhCCCCceEEEEecCChHHHHHHHHHH
Confidence 988765 44556789999999999863
No 30
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=99.26 E-value=7.7e-14 Score=120.83 Aligned_cols=45 Identities=13% Similarity=0.066 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHH
Q 023529 196 QDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCIL 250 (281)
Q Consensus 196 ~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~ 250 (281)
++++++|+.+++++++.|| |+.|||||++....+. |.+.+++.++
T Consensus 164 ~~~~~~L~~~la~l~~~~d--------P~~IVlGG~~~~~~~~--~~~~i~~~~~ 208 (226)
T 3lm2_A 164 AKWQKRVQDVVERLSAALE--------PDEVVIGGGNVERLEN--LPPKCRRGDN 208 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGCCC--CCTTEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHC--------CCEEEEeChhhhhhhH--HHHHHHHHHH
Confidence 5788999999999999999 9999999999998873 5665555443
No 31
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=99.09 E-value=4.4e-09 Score=100.16 Aligned_cols=75 Identities=15% Similarity=0.156 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCcc--EEEEcCcccCcchhhhHHHHHHHHHhhCC---------Ccee
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFP--LVMVGGVLEANRRWDIGREVVKCILRDYP---------GAVP 258 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~--IvLgGgv~~~~~~~~l~~~i~~~l~~~~p---------~~~i 258 (281)
.|..|.+++|+.+|.+++.+++..+ |+. |-+.||+.++.+. |.+.+++.+++..+ .+.+
T Consensus 383 i~~~V~~RAA~L~Aa~iaail~~~~--------~~~~~VgvdGSv~~~~P~--f~~~~~~~l~~ll~~~~~~~~~~~v~l 452 (485)
T 3o8m_A 383 LAELVGTRAARLTVCGVSAICDKRG--------YKTAHIAADGSVFNRYPG--YKEKAAQALKDIYNWDVEKMEDHPIQL 452 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT--------CSSEEEEEESHHHHHSTT--HHHHHHHHHHHHHTCCCCSGGGCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC--------CCceEEEEecChhccCcc--HHHHHHHHHHHHhccccccCCCceEEE
Confidence 6777899999999999999999999 555 5557999999873 89999999988643 2566
Q ss_pred eCCCCChhHHHHHHHH
Q 023529 259 IRPKVEPAVGAALLAW 274 (281)
Q Consensus 259 ~~~~~~~~~GAa~la~ 274 (281)
....+.+.+|||++|.
T Consensus 453 ~~a~DGSg~GAAliAa 468 (485)
T 3o8m_A 453 VAAEDGSGVGAAIIAC 468 (485)
T ss_dssp EECCCTTTHHHHHHHH
T ss_pred EEcCCChHHHHHHHHH
Confidence 6678999999999885
No 32
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.98 E-value=5.3e-09 Score=92.58 Aligned_cols=220 Identities=17% Similarity=0.198 Sum_probs=119.5
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEc
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig 101 (281)
.|++|||+|+|+++++++|. +|+++.+...++.. ++. +.+.++++++.+ .+++..++.+ ++
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~---------~g~i~~~~~~~~~~----~~~---~~~~~~l~~l~~-~~~~~~~i~~--i~ 63 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKD---------GKEIVAKSLVAVGT----GTS---GPARSISEVLEN-AHMKKEDMAF--TL 63 (270)
T ss_dssp CEEEEEEECSSEEEEEEEET---------TTEEEEEEEEECCS----SCC---HHHHHHHHHHHH-HTCCGGGCSE--EE
T ss_pred cEEEEEEeccceEEEEEEeC---------CCCEEEEEEecCCC----CHH---HHHHHHHHHHHH-cCCChhHEEE--EE
Confidence 48999999999999999994 89999887665422 111 233344555543 3455556655 55
Q ss_pred ccCCCChhhHH----HHHHhhcHHHHHHHHHH--------------HHHHhhcCC--------CCC--c-hhHHHHHHhc
Q 023529 102 VSGVNHPTDQQ----RILNWLSGYGIAAQALT--------------AVIRAYDGR--------GPD--T-MLTSNILSTL 152 (281)
Q Consensus 102 ~~G~~~~~~~~----~l~~~~sg~~iG~~~l~--------------~~~~~~dg~--------~~~--~-~l~~~~~~~~ 152 (281)
++|+....... .+.+. .+...|...+. .++...+|. .|. + .+...+...+
T Consensus 64 ~TG~g~~~~~~~~~~~v~Ei-~ah~~ga~~~~~~~~~vidiGGqd~k~i~~~~g~v~~~~mn~~ca~GtG~~le~~a~~l 142 (270)
T 1hux_A 64 ATGYGRNSLEGIADKQMSEL-SCHAMGASFIWPNVHTVIDIGGQDVKVIHVENGTMTNFQMNDKCAAGTGRFLDVMANIL 142 (270)
T ss_dssp EESTTTTTTTTTCSEEECHH-HHHHHHHHHHCTTCCEEEEEETTEEEEEEEETTEEEEEEEESSCCTTSHHHHHHHHHHH
T ss_pred EeCccccchhhcCCCCcccH-HHHHHHHHHhCCCCCEEEEECCCceEEEEEeCCceeeeccccccchhhHHHHHHHHHHh
Confidence 67764321110 00000 11111111100 000001121 122 2 2444555566
Q ss_pred CCCChhhHHHHhccCCChHHhh----cc-hHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEE
Q 023529 153 ELSSPDELIGWTYVDPSWARIA----AL-VPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLV 227 (281)
Q Consensus 153 ~~~s~~~l~~~~~~~~~~~~~a----~~-a~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~Iv 227 (281)
++ +.+++.+...+...+-.++ .+ -.+++.+..+|.+. .+|++...+.++..+..+++..+. ++.|+
T Consensus 143 g~-~~~el~~la~~~~~p~~~~~~c~vfa~s~v~~l~~~g~~~-~di~~av~e~Va~~i~~~~~~~~~-------~~~i~ 213 (270)
T 1hux_A 143 EV-KVSDLAELGAKSTKRVAISSTCTVFAESEVISQLSKGTDK-IDIIAGIHRSVASRVIGLANRVGI-------VKDVV 213 (270)
T ss_dssp TC-CTTTHHHHHTTCCSCCCCCCCSHHHHHHHHHHHHHTTCCH-HHHHHHHHHHHHHHHHHHHHTTCC-------CSSEE
T ss_pred CC-CHHHHHHHHhhCCCCCCcccccchhHhHHHHHHhhCCCCH-HHHHHHHHHHHHHHHHHHHhcCCC-------CCeEE
Confidence 64 3455544433211000111 11 23566666677766 577788888888888777776551 46899
Q ss_pred EEcCcccCcchhhhHHHHHHHHHhhCCCceeeCC---CCChhHHHHHHHHhhhh
Q 023529 228 MVGGVLEANRRWDIGREVVKCILRDYPGAVPIRP---KVEPAVGAALLAWNSFM 278 (281)
Q Consensus 228 LgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~---~~~~~~GAa~la~~~~~ 278 (281)
+.||+..+ +. +.+.+.+.+.. ++..| ...+++||+++|.+...
T Consensus 214 ~~GG~a~n-~~--~~~~~~~~lg~-----~v~~p~~~~~~~AlGAAl~A~~~~~ 259 (270)
T 1hux_A 214 MTGGVAQN-YG--VRGALEEGLGV-----EIKTSPLAQYNGALGAALYAYKKAA 259 (270)
T ss_dssp EESGGGGC-HH--HHHHHHHHHCS-----CEECCGGGGGHHHHHHHHHHHHHTT
T ss_pred EeCccccC-HH--HHHHHHHHHCC-----CeEeCCCcchHhHHHHHHHHHHhhh
Confidence 99998865 32 67777776653 23333 33589999999987543
No 33
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.82 E-value=3.6e-07 Score=80.47 Aligned_cols=60 Identities=20% Similarity=0.360 Sum_probs=43.5
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeE
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Ig 99 (281)
|+||||+|+|+++++++| ++++++.....+... .++.+ .+.+++++++++....++..++
T Consensus 2 ~~lGID~GsT~tk~av~d---------~~~~il~~~~~~~g~----~~e~a----~~vl~~~~~~a~~~~~~~~~~a 61 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILK---------NGEDIVASETISSGT----GTTGP----SRVLEKLYGKTGLAREDIKKVV 61 (276)
T ss_dssp EEEEEEECSSCEEEEEEE---------TTTEEEEEEEESCCT----TSSHH----HHHHHHHHHHHCCCGGGEEEEE
T ss_pred eEEEEEcCccEEEEEEEE---------CCCeEEEEEEecCCC----CHHHH----HHHHHHHHHHCCCcchhccccc
Confidence 899999999999999999 377888776554321 22322 3457778888888877776654
No 34
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=98.60 E-value=1.2e-07 Score=91.33 Aligned_cols=76 Identities=20% Similarity=0.200 Sum_probs=65.4
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCcc
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRS 93 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~ 93 (281)
|+.|+||||+|+|++|++++|. +|+++.+...+.. .+.+.+++++++.+.+.+++++++.+++..
T Consensus 24 M~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~ 94 (520)
T 4e1j_A 24 MGGYILAIDQGTTSTRAIVFDG---------NQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITAN 94 (520)
T ss_dssp CSCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGG
T ss_pred hhCeEEEEEeCCcceEEEEECC---------CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4469999999999999999996 9999988655432 223468999999999999999999888888
Q ss_pred ccceeEEcccC
Q 023529 94 AVRAVCLAVSG 104 (281)
Q Consensus 94 ~i~~Igig~~G 104 (281)
+|.+|||+.+|
T Consensus 95 ~I~~Igis~~g 105 (520)
T 4e1j_A 95 DIAAIGITNQR 105 (520)
T ss_dssp GEEEEEEEECS
T ss_pred cEEEEEEeCCc
Confidence 99999999998
No 35
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=98.58 E-value=1.4e-07 Score=90.34 Aligned_cols=76 Identities=14% Similarity=0.147 Sum_probs=65.4
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCcc
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRS 93 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~ 93 (281)
|+.|++|||+|+|++|++++|. +|+++.+...+.. .+.+.+++++++.+.+.+++++++.+++..
T Consensus 1 M~~~~lgiDiGtt~~k~~l~d~---------~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~ 71 (497)
T 2zf5_O 1 MEKFVLSLDEGTTSARAIIFDR---------ESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPN 71 (497)
T ss_dssp CCCEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred CCcEEEEEecCCchhEEEEECC---------CCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 5679999999999999999995 8999988876643 223458899999999999999999888888
Q ss_pred ccceeEEcccC
Q 023529 94 AVRAVCLAVSG 104 (281)
Q Consensus 94 ~i~~Igig~~G 104 (281)
+|.+|||+.+|
T Consensus 72 ~i~~Igis~~~ 82 (497)
T 2zf5_O 72 QIAAIGVTNQR 82 (497)
T ss_dssp GEEEEEEEECS
T ss_pred cEEEEEEecCC
Confidence 89999999998
No 36
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=98.58 E-value=1.6e-07 Score=90.11 Aligned_cols=76 Identities=14% Similarity=0.159 Sum_probs=65.2
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCcc
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRS 93 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~ 93 (281)
|++|+||||+|+|++|++++|. +|+++.+...+.. .+.+.+++++++.+.+.+++++++.+++..
T Consensus 4 M~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~ 74 (501)
T 3g25_A 4 MEKYILSIDQGTTSSRAILFNQ---------KGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVRAD 74 (501)
T ss_dssp CCCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGG
T ss_pred cccEEEEEEeCccceEEEEEcC---------CCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 6679999999999999999996 9999988766532 223468999999999999999999888888
Q ss_pred ccceeEEcccC
Q 023529 94 AVRAVCLAVSG 104 (281)
Q Consensus 94 ~i~~Igig~~G 104 (281)
+|.+|||+.++
T Consensus 75 ~I~~Igis~~~ 85 (501)
T 3g25_A 75 QIAGIGITNQR 85 (501)
T ss_dssp GEEEEEEEECS
T ss_pred cEEEEEEECCc
Confidence 99999998764
No 37
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=98.57 E-value=8.9e-08 Score=92.01 Aligned_cols=76 Identities=22% Similarity=0.269 Sum_probs=64.8
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCcc
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRS 93 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~ 93 (281)
++.|+||||+|+|++|++++|. +|+++.+...+.. .+.+.+++++++.+.+.+++++++.+++..
T Consensus 5 ~~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~ 75 (508)
T 3ifr_A 5 QGRQVIGLDIGTTSTIAILVRL---------PDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESDW 75 (508)
T ss_dssp --CEEEEEEECSSEEEEEEEET---------TTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGGC
T ss_pred cCCEEEEEEecCcceEEEEECC---------CCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCChh
Confidence 3579999999999999999995 9999988766532 223468999999999999999999888888
Q ss_pred ccceeEEcccC
Q 023529 94 AVRAVCLAVSG 104 (281)
Q Consensus 94 ~i~~Igig~~G 104 (281)
+|.+||++.+|
T Consensus 76 ~I~~Igis~~~ 86 (508)
T 3ifr_A 76 RPGGICVTGML 86 (508)
T ss_dssp CEEEEEEEECS
T ss_pred heEEEEEECCC
Confidence 99999999999
No 38
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=98.56 E-value=1.2e-07 Score=90.88 Aligned_cols=76 Identities=12% Similarity=0.115 Sum_probs=63.4
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCC------CccCCHHHHHHHHHHHHHHHHHHc--CCC
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKS--GSN 91 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~------~~~~~~~~~~~~i~~~i~~~l~~~--g~~ 91 (281)
||.|++|||+|+|++|++++|. +|+++.+...+... +.+.+++++++.+.+.+++++++. +++
T Consensus 2 ~m~~~lgIDiGtT~~k~~l~d~---------~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~ 72 (503)
T 2w40_A 2 SMNVILSIDQSTQSTKVFFYDE---------ELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYT 72 (503)
T ss_dssp -CEEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CccEEEEEEeCCcceEEEEECC---------CCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 5679999999999999999995 89999888766432 223588999999999999999876 666
Q ss_pred ccccceeEEcccC
Q 023529 92 RSAVRAVCLAVSG 104 (281)
Q Consensus 92 ~~~i~~Igig~~G 104 (281)
..+|.+|||+.+|
T Consensus 73 ~~~i~~Igis~~~ 85 (503)
T 2w40_A 73 SVIIKCIGITNQR 85 (503)
T ss_dssp SCEEEEEEEEECS
T ss_pred ccceEEEEEcCCc
Confidence 6789999999996
No 39
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.50 E-value=3.3e-07 Score=88.02 Aligned_cols=75 Identities=16% Similarity=0.205 Sum_probs=65.0
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCccc
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~ 94 (281)
+.|+||||+|+|++|++++|. +|+++.+.+.+.. .+.+.+++++++.+.+.+++++++.+++..+
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~ 72 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDH---------DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQ 72 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred CcEEEEEEcCCcceEEEEECC---------CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 469999999999999999996 9999988766532 2234689999999999999999999988889
Q ss_pred cceeEEcccC
Q 023529 95 VRAVCLAVSG 104 (281)
Q Consensus 95 i~~Igig~~G 104 (281)
|.+|||+.+|
T Consensus 73 I~~Igis~~~ 82 (510)
T 2p3r_A 73 IAAIGITNQR 82 (510)
T ss_dssp EEEEEEEECS
T ss_pred eEEEEEeCCc
Confidence 9999999987
No 40
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=98.47 E-value=3.6e-07 Score=87.41 Aligned_cols=74 Identities=22% Similarity=0.166 Sum_probs=63.1
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i 95 (281)
.|++|||+|+|++|++++|. +|+++.+...+.. .+.+.+++++++.+.+.+++++++.+++..+|
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~---------~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i 72 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL---------EGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEAGEV 72 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred cEEEEEeeCCcceEEEEECC---------CCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 58999999999999999995 8999988766542 22345899999999999999999988887889
Q ss_pred ceeEEcccC
Q 023529 96 RAVCLAVSG 104 (281)
Q Consensus 96 ~~Igig~~G 104 (281)
.+|||+.+|
T Consensus 73 ~~Igis~~~ 81 (495)
T 2dpn_A 73 LALGITNQR 81 (495)
T ss_dssp CEEEEEECS
T ss_pred EEEEEeCCC
Confidence 999999996
No 41
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=98.47 E-value=4.8e-07 Score=86.93 Aligned_cols=76 Identities=13% Similarity=0.035 Sum_probs=64.2
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCC------CCCccCCHHHHHHHHHHHHHHHHHHcCCCcc
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGC------SNHNSVGEDAARETIEKVMADALLKSGSNRS 93 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~------~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~ 93 (281)
||.|+||||+|+|++|++++|. +|+++.+...+. ..+.+.+++++++.+.+.+++++ +.+++..
T Consensus 3 mm~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~~~ 72 (511)
T 3hz6_A 3 LAFYIATFDIGTTEVKAALADR---------DGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDAR 72 (511)
T ss_dssp CCCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCCGG
T ss_pred cccEEEEEEeCCCceEEEEECC---------CCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCChh
Confidence 6789999999999999999996 899998876542 22335689999999999999999 8888888
Q ss_pred ccceeEEcccCC
Q 023529 94 AVRAVCLAVSGV 105 (281)
Q Consensus 94 ~i~~Igig~~G~ 105 (281)
+|.+||++..+.
T Consensus 73 ~I~~Igis~q~~ 84 (511)
T 3hz6_A 73 RVSAIVLSGQMQ 84 (511)
T ss_dssp GEEEEEEEECCS
T ss_pred HeEEEEEecccc
Confidence 999999987653
No 42
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=98.46 E-value=5.1e-07 Score=86.64 Aligned_cols=75 Identities=16% Similarity=0.265 Sum_probs=64.3
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCccc
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~ 94 (281)
+.|+||||+|+|++|++++|. +|+++.+...+.. .+.+.+++++++.+.+.+++++++.+++..+
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~ 74 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR---------NGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEA 74 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred CCEEEEEEcCCCceEEEEECC---------CCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 469999999999999999996 9999988765432 2335689999999999999999999888889
Q ss_pred cceeEEcccC
Q 023529 95 VRAVCLAVSG 104 (281)
Q Consensus 95 i~~Igig~~G 104 (281)
|.+|||+.++
T Consensus 75 I~~Igis~~~ 84 (506)
T 3h3n_X 75 IAGIGITNQR 84 (506)
T ss_dssp EEEEEEEECS
T ss_pred eEEEEeeCCc
Confidence 9999998875
No 43
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=98.44 E-value=2.1e-05 Score=74.49 Aligned_cols=83 Identities=14% Similarity=0.178 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCc--eeeCCCCChhH
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGA--VPIRPKVEPAV 267 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~--~i~~~~~~~~~ 267 (281)
.|..|..++|+..|.+++.+++..+.....+..+..|.+-||+.++.+. |.+.+++.+++..|.. .+....+.+.+
T Consensus 375 i~~~V~~RaA~L~Aa~iaail~k~~~~~~~~~~~~~VgvDGsv~~~yp~--f~~~~~~~l~~l~~~~~v~l~~a~DGSg~ 452 (470)
T 3f9m_A 375 ACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPS--FKERFHASVRRLTPSCEITFIESEEGSGR 452 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSEEEEEEEECHHHHHCTT--HHHHHHHHHHHHCTTEEEEEEECSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeccHHHhCch--HHHHHHHHHHHHcCCCeEEEEEcCCCcHH
Confidence 6778899999999999999999887332112224789999999999873 8999999999877754 45557888999
Q ss_pred HHHHHHH
Q 023529 268 GAALLAW 274 (281)
Q Consensus 268 GAa~la~ 274 (281)
|||++|.
T Consensus 453 GAAliAa 459 (470)
T 3f9m_A 453 GAALVSA 459 (470)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999985
No 44
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=98.39 E-value=8.8e-07 Score=84.91 Aligned_cols=74 Identities=16% Similarity=0.214 Sum_probs=63.8
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCC------CccCCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~------~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i 95 (281)
.|++|||+|+|++|++++|. +|+++.+...+... +.+.+++++++.+.+.+++++++.+++..+|
T Consensus 2 ~~~lgiDiGtts~k~~l~d~---------~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i 72 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDH---------SGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHEDI 72 (504)
T ss_dssp CEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred CEEEEEecCCcceEEEEECC---------CCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCcccE
Confidence 48999999999999999996 89999887665432 2235889999999999999999988877889
Q ss_pred ceeEEcccC
Q 023529 96 RAVCLAVSG 104 (281)
Q Consensus 96 ~~Igig~~G 104 (281)
.+|||+.+|
T Consensus 73 ~~Igis~~g 81 (504)
T 2d4w_A 73 AAVGITNQR 81 (504)
T ss_dssp EEEEEEECS
T ss_pred EEEEEeCCC
Confidence 999999998
No 45
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.39 E-value=8.6e-07 Score=85.46 Aligned_cols=76 Identities=16% Similarity=0.191 Sum_probs=63.7
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecC------CCCCccCCHHHHHHHHHHHHHHHHHHcCCCcc
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG------CSNHNSVGEDAARETIEKVMADALLKSGSNRS 93 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~------~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~ 93 (281)
..+|+||||+|+|++|++++|. +|++++....+ ..++.+.+++++++.+.+.++++++++++++.
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~---------~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~~ 72 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDH---------DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSD 72 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred CceEEEEEEccccceeeeEEcC---------CCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChh
Confidence 3579999999999999999995 99999876543 22344568999999999999999999999999
Q ss_pred ccceeEEcccC
Q 023529 94 AVRAVCLAVSG 104 (281)
Q Consensus 94 ~i~~Igig~~G 104 (281)
+|.+|||..-+
T Consensus 73 ~I~aIgis~q~ 83 (526)
T 3ezw_A 73 QIAAIGITNQR 83 (526)
T ss_dssp GEEEEEEEECS
T ss_pred hEEEEEEeCCC
Confidence 99998876554
No 46
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=98.34 E-value=4.9e-05 Score=71.40 Aligned_cols=83 Identities=17% Similarity=0.169 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCC--ceeeCCCCChhH
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPG--AVPIRPKVEPAV 267 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~--~~i~~~~~~~~~ 267 (281)
.|..|..++|+..|.+++.+++..+........+..|.+-|+|.+.+|. |.+.+++.+++..|. +.+...++.+-.
T Consensus 351 i~~~V~~RaA~L~Aa~iaai~~k~~~~~~~~~~~~~VgvDGsvy~~~P~--f~~~l~~~l~~l~~~~~v~~~~s~DGSg~ 428 (445)
T 3hm8_A 351 VCQAVSQRAAQLCGAGVAAVVEKIRENRGLEELAVSVGVDGTLYKLHPR--FSSLVAATVRELAPRCVVTFLQSEDGSGK 428 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTT--HHHHHHHHHHHHCTTEEEEEEECSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccCcEEEEeceehccChh--HHHHHHHHHHHhCCCCcEEEEECCCCchH
Confidence 6777899999999999999999875211111225689999999999873 899999999988775 445557888999
Q ss_pred HHHHHHH
Q 023529 268 GAALLAW 274 (281)
Q Consensus 268 GAa~la~ 274 (281)
|||+.|.
T Consensus 429 GAAl~AA 435 (445)
T 3hm8_A 429 GAALVTA 435 (445)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999885
No 47
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=98.32 E-value=1.2e-06 Score=84.97 Aligned_cols=73 Identities=14% Similarity=0.189 Sum_probs=62.0
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCC------CCCccCCHHHHHHHHHHHHHHHHHHcCCCccc
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGC------SNHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~------~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~ 94 (281)
+.|+||||+|+|++|++++|. +|+++.+...+. ..+.+.+++++++.+.+.+++++++.+++..+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~---------~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~~~ 74 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDL---------QGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQ 74 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred CcEEEEEEECcccEEEEEECC---------CCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCHhH
Confidence 469999999999999999995 999998876552 22335689999999999999999999988888
Q ss_pred cceeEEcc
Q 023529 95 VRAVCLAV 102 (281)
Q Consensus 95 i~~Igig~ 102 (281)
|.+||++.
T Consensus 75 I~~Igis~ 82 (554)
T 3l0q_A 75 VKGLGFDA 82 (554)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEcC
Confidence 99988754
No 48
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=98.24 E-value=3.2e-06 Score=81.03 Aligned_cols=73 Identities=16% Similarity=0.213 Sum_probs=60.4
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCC------CCCccCCHHHHHHHHHHHHHHHHHHcCCCccc
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGC------SNHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~------~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~ 94 (281)
|.|+||||+|+|++|++++|. +|+++.+.+.+. ..+.+.+++++++.+.+.+++++++.+ .+
T Consensus 3 m~~~lgIDiGtts~K~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~---~~ 70 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDI---------NGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID---GK 70 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS---SE
T ss_pred CCEEEEEEecCCceEEEEEcC---------CCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC---CC
Confidence 369999999999999999995 899998886643 223356899999999999999998765 57
Q ss_pred cceeEEcccCC
Q 023529 95 VRAVCLAVSGV 105 (281)
Q Consensus 95 i~~Igig~~G~ 105 (281)
|.+|||+..+.
T Consensus 71 I~~Igis~q~~ 81 (504)
T 3ll3_A 71 IAAISWSSQMH 81 (504)
T ss_dssp EEEEEEEECSS
T ss_pred eEEEEEECCCC
Confidence 99998887654
No 49
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=98.23 E-value=2e-06 Score=83.65 Aligned_cols=76 Identities=14% Similarity=0.144 Sum_probs=60.6
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCC-----------------CCccCCHHHHHHHHHHHHHH
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS-----------------NHNSVGEDAARETIEKVMAD 83 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~-----------------~~~~~~~~~~~~~i~~~i~~ 83 (281)
+.|+||||+|+|++|++++|. ++|+++.+...+.. .+.+.+++++++.+.+.+++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~--------~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~ 75 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDL--------SNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPA 75 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEET--------TTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHH
T ss_pred CCEEEEEecCCcceEEEEEEC--------CCCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHH
Confidence 469999999999999999994 38999988765432 22356889999999999999
Q ss_pred HHHHcCCCccccceeEEcccC
Q 023529 84 ALLKSGSNRSAVRAVCLAVSG 104 (281)
Q Consensus 84 ~l~~~g~~~~~i~~Igig~~G 104 (281)
++++++++..+|.+|||+..+
T Consensus 76 ~l~~~~~~~~~I~~Igis~q~ 96 (572)
T 3jvp_A 76 VMKESGVDADDVIGIGVDFTA 96 (572)
T ss_dssp HHHC---CCSCEEEEEEEECS
T ss_pred HHHHcCCChhHEEEEEEecCC
Confidence 999988888899999988865
No 50
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=98.18 E-value=0.00024 Score=65.47 Aligned_cols=86 Identities=16% Similarity=0.120 Sum_probs=66.4
Q ss_pred ChhhHHHHhccCCChHHhh--cchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcc
Q 023529 156 SPDELIGWTYVDPSWARIA--ALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVL 233 (281)
Q Consensus 156 s~~~l~~~~~~~~~~~~~a--~~a~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~ 233 (281)
|.+++...+++.+..-.+. .-.++|++++++||+.|+..++..+..+++.|.++...|+ +|+.||++||+.
T Consensus 262 s~~e~~~~Lnk~sGLlg~sG~~D~R~i~~~a~~Gd~~A~la~d~f~yriak~Iga~aa~LG-------~vDaIVfTGGIg 334 (398)
T 4ijn_A 262 SVDDIESMLNRRSGVLGLGGASDFRKLRELIESGDEHAKLAYDVYIHRLRKYIGAYMAVLG-------RTDVISFTAGVG 334 (398)
T ss_dssp CHHHHHHHHHHSCHHHHHHCCSSHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHS-------SCCEEEEEHHHH
T ss_pred CHHHHHHHHHhccCcceecCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCcEEEECCccc
Confidence 6677776666553211111 2358999999999999999999999999999999999994 299999999999
Q ss_pred cCcchhhhHHHHHHHHH
Q 023529 234 EANRRWDIGREVVKCIL 250 (281)
Q Consensus 234 ~~~~~~~l~~~i~~~l~ 250 (281)
++.+ .+++.+.+.+.
T Consensus 335 Ens~--~vr~~I~~~l~ 349 (398)
T 4ijn_A 335 ENVP--PVRRDALAGLG 349 (398)
T ss_dssp HHCH--HHHHHHHTTCG
T ss_pred cccH--HHHHHHHHHHh
Confidence 8765 26777766554
No 51
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=98.17 E-value=3.8e-06 Score=80.04 Aligned_cols=71 Identities=15% Similarity=0.127 Sum_probs=58.8
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~ 96 (281)
|++|||+|+|++|++++|. +|+++.+.+.+.. .+.+.+++++++.+.+.+++++++.+ ..+|.
T Consensus 1 ~~lgiDiGtt~~k~~l~d~---------~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~--~~~i~ 69 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNE---------QGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHS--LQDVK 69 (484)
T ss_dssp CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSC--CTTCC
T ss_pred CEEEEEecCcccEEEEECC---------CCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCC--ccceE
Confidence 4799999999999999995 8999988765532 22346889999999999999988753 45799
Q ss_pred eeEEcccC
Q 023529 97 AVCLAVSG 104 (281)
Q Consensus 97 ~Igig~~G 104 (281)
+|||+.+|
T Consensus 70 ~Igis~~~ 77 (484)
T 2itm_A 70 ALGIAGQM 77 (484)
T ss_dssp EEEEEECS
T ss_pred EEEEcCCc
Confidence 99999999
No 52
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=98.07 E-value=4.7e-06 Score=79.51 Aligned_cols=70 Identities=11% Similarity=0.066 Sum_probs=54.1
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCC-----CCccCCHHHHHHHHHHHHHHHHHHcCCCccc
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS-----NHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~-----~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~ 94 (281)
||+|++|||+|+|++|++++|. +|+++.+.+.+.. .+.+.+++++++.+.+.+++++ + .+
T Consensus 4 mm~~~lgIDiGTts~Ka~l~d~---------~G~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~-~-----~~ 68 (482)
T 3h6e_A 4 STGATIVIDLGKTLSKVSLWDL---------DGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA-D-----HP 68 (482)
T ss_dssp ----CEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT-T-----SC
T ss_pred hhceEEEEEcCCCCeEEEEEEC---------CCcEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH-h-----cC
Confidence 6789999999999999999995 9999988776532 2234688999999999888876 2 46
Q ss_pred cceeEEcccC
Q 023529 95 VRAVCLAVSG 104 (281)
Q Consensus 95 i~~Igig~~G 104 (281)
|.+|||+..+
T Consensus 69 I~aIgis~~~ 78 (482)
T 3h6e_A 69 VTTIVPVGHG 78 (482)
T ss_dssp CCEEEEEECS
T ss_pred CCEEEEecCc
Confidence 8899988876
No 53
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=97.92 E-value=2.3e-05 Score=75.26 Aligned_cols=71 Identities=17% Similarity=0.176 Sum_probs=56.0
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igi 100 (281)
+.|+||||+|+|++|++++|. .+|+++.+...+...+.+.+++.+++.+.+.++ +.+. ..+|.+||+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~--------~~G~i~~~~~~~~~g~~e~d~~~~~~~i~~~l~----~~~~-~~~I~~Igi 70 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDA--------ETGELVRFGQAKHPNGTSVDPSYWWSAFQEAAE----QAGG-LDDVSALAV 70 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEET--------TTCCEEEEEEEECCSSSEECTHHHHHHHHHHHH----HTTC-STTEEEEEE
T ss_pred CcEEEEEEeccccEEEEEEEC--------CCCeEEEEEEEeCCCCceECHHHHHHHHHHHHH----hcCC-ccCceEEEE
Confidence 469999999999999999993 289999988777544455688888887766665 4444 468999999
Q ss_pred cccC
Q 023529 101 AVSG 104 (281)
Q Consensus 101 g~~G 104 (281)
+..|
T Consensus 71 s~q~ 74 (515)
T 3i8b_A 71 GGQQ 74 (515)
T ss_dssp EECS
T ss_pred eCCc
Confidence 8877
No 54
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.80 E-value=0.00073 Score=58.70 Aligned_cols=75 Identities=19% Similarity=0.034 Sum_probs=48.8
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCc---cCCHHHHHHHHHHHHHHHHHHcCCCccccce
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHN---SVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~ 97 (281)
..+++|||+|.++++++++|. ++++++....++.... ..+.+.+.+.+...++.+....+.+. ..
T Consensus 27 ~~~~~gIDiGS~s~k~vi~~~---------~~~~l~~~~~~~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~~---~~ 94 (272)
T 3h1q_A 27 PPYKVGVDLGTADIVLVVTDQ---------EGIPVAGALKWASVVKDGLVVDYIGAIQIVRELKAKVERLLGSEL---FQ 94 (272)
T ss_dssp SCCEEEEECCSSEEEEEEECT---------TCCEEEEEEEECCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSCC---CE
T ss_pred CCEEEEEEcccceEEEEEECC---------CCcEEEEEeecccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCcc---Ce
Confidence 358999999999999999884 7788887765533211 12346666666666666666555443 34
Q ss_pred eEEcccCCCC
Q 023529 98 VCLAVSGVNH 107 (281)
Q Consensus 98 Igig~~G~~~ 107 (281)
+.+.+|....
T Consensus 95 ~v~tvp~~~~ 104 (272)
T 3h1q_A 95 AATAIPPGTV 104 (272)
T ss_dssp EEEECCSCC-
T ss_pred EEEEcCCCCC
Confidence 4467776433
No 55
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=97.78 E-value=2.1e-05 Score=74.95 Aligned_cols=68 Identities=9% Similarity=0.015 Sum_probs=50.9
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecC----------CCCCccCCHHHHHHHHHHHHHHHHHHcCCC
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG----------CSNHNSVGEDAARETIEKVMADALLKSGSN 91 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~----------~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~ 91 (281)
.++||||+|+|++|++++|. +|+++.....+ ...+.+.+++++++.+.+.++++...
T Consensus 4 ~~~lgiDiGtts~k~~l~d~---------~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~---- 70 (489)
T 2uyt_A 4 RNCVAVDLGASSGRVMLARY---------ERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAA---- 70 (489)
T ss_dssp EEEEEEEECSSEEEEEEEEE---------EGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHT----
T ss_pred ceEEEEEecCCCceEEEEEe---------cCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhC----
Confidence 47999999999999999996 78877654321 11122357889999999988887652
Q ss_pred ccccceeEEcc
Q 023529 92 RSAVRAVCLAV 102 (281)
Q Consensus 92 ~~~i~~Igig~ 102 (281)
..+|.+|||+.
T Consensus 71 ~~~i~~Igis~ 81 (489)
T 2uyt_A 71 GIAIDSIGIDT 81 (489)
T ss_dssp TCCCCEEEEEE
T ss_pred CCCceEEEEec
Confidence 24689999888
No 56
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=97.53 E-value=0.00018 Score=63.26 Aligned_cols=67 Identities=12% Similarity=0.100 Sum_probs=53.2
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEcc
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig~ 102 (281)
++++||+|+|+++++++| +++++...+.++. . .+.++.. ..+.+++++.+.+..+|.+|+++.
T Consensus 3 MlL~IDIGNT~iK~gl~d----------~~~l~~~~r~~T~-~--~t~de~~----~~l~~ll~~~~~~~~~I~~iiISS 65 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFD----------GDEIKLRFRHTSK-V--STSDELG----IFLKSVLRENNCSPETIRKIAICS 65 (266)
T ss_dssp CEEEEEECSSEEEEEEEE----------TTEEEEEEEEECS-C--CCHHHHH----HHHHHHHHTTTCCGGGCCEEEEEE
T ss_pred eEEEEEECCCeEEEEEEE----------CCEEEEEEEecCC-C--CCHHHHH----HHHHHHHHHcCCChhhceEEEEec
Confidence 589999999999999999 6788888887754 2 4666653 445667777888888899999999
Q ss_pred cCCC
Q 023529 103 SGVN 106 (281)
Q Consensus 103 ~G~~ 106 (281)
+++.
T Consensus 66 Vvp~ 69 (266)
T 3djc_A 66 VVPQ 69 (266)
T ss_dssp SCHH
T ss_pred chHh
Confidence 9863
No 57
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=97.49 E-value=0.00014 Score=70.24 Aligned_cols=75 Identities=17% Similarity=0.116 Sum_probs=52.7
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCC----------CCCc-------cCCHHHHHHHHHHHHHH
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGC----------SNHN-------SVGEDAARETIEKVMAD 83 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~----------~~~~-------~~~~~~~~~~i~~~i~~ 83 (281)
+.|+||||+|+|.+|++++|. +|+++++...+- ..+. +.++++.+......+.+
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~---------~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~ 79 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDA---------ELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILE 79 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEET---------TCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCcCEEEEEECC---------CCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHH
Confidence 469999999999999999995 999998876542 1111 12445444444444555
Q ss_pred HHHHcCCCccccceeEEcccC
Q 023529 84 ALLKSGSNRSAVRAVCLAVSG 104 (281)
Q Consensus 84 ~l~~~g~~~~~i~~Igig~~G 104 (281)
.+.+.+++..+|.+||+..-+
T Consensus 80 ~l~~~~~~~~~I~aIgis~q~ 100 (538)
T 4bc3_A 80 KMKASGFDFSQVLALSGAGQQ 100 (538)
T ss_dssp HHHHTTCCGGGEEEEEEEECS
T ss_pred HHHHcCCChHHeEEEEecccc
Confidence 667788888899998876643
No 58
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=97.45 E-value=0.012 Score=54.11 Aligned_cols=86 Identities=15% Similarity=0.135 Sum_probs=65.9
Q ss_pred ChhhHHHHhccCCChHHhh--cchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcc
Q 023529 156 SPDELIGWTYVDPSWARIA--ALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVL 233 (281)
Q Consensus 156 s~~~l~~~~~~~~~~~~~a--~~a~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~ 233 (281)
|.+++...+++.+..-.+. .-.++|.+++++||+.|+..++-.+..+++.|.++...++ +++.||+.||+.
T Consensus 253 s~~ei~~~Lnk~SGLlglsG~~D~R~v~~~~~~gd~~A~lA~d~f~yri~k~Iga~aa~Lg-------~vDaIVfTGGIg 325 (391)
T 3r9p_A 253 GVDDVESMLNHRSGVVGLSGVRDFRRLRELIESGDGAAQLAYSVFTHRLRKYIGAYLAVLG-------HTDVISFTAGIG 325 (391)
T ss_dssp CHHHHHHHHHHSCHHHHHHSCSCSHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHS-------SCCEEEEEHHHH
T ss_pred CHHHHHHHHHhccCceeecCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCEEEECcccc
Confidence 6677776666554211111 2358899999999999999999999999999999999985 289999999999
Q ss_pred cCcchhhhHHHHHHHHH
Q 023529 234 EANRRWDIGREVVKCIL 250 (281)
Q Consensus 234 ~~~~~~~l~~~i~~~l~ 250 (281)
++.+ .+++.+.+.+.
T Consensus 326 ens~--~vR~~i~~~l~ 340 (391)
T 3r9p_A 326 ENDA--AVRRDAVSGME 340 (391)
T ss_dssp HHCH--HHHHHHHTTCG
T ss_pred cCCH--HHHHHHHHHHH
Confidence 8765 26777766554
No 59
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=97.21 E-value=0.069 Score=47.96 Aligned_cols=73 Identities=14% Similarity=0.234 Sum_probs=51.9
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCc-cCCHH----HHHHHHHHHHHHHHHHcCCCccccce
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHN-SVGED----AARETIEKVMADALLKSGSNRSAVRA 97 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~-~~~~~----~~~~~i~~~i~~~l~~~g~~~~~i~~ 97 (281)
+++|||.+.+.+.+++++ +|+++......-.... ...|+ .-.+.+..++++++++++++.+++.+
T Consensus 2 ~iLgIdts~~~~~val~~----------~g~i~~~~~~~~~~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~ 71 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVS----------EDKVLANVFDTLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDV 71 (330)
T ss_dssp CEEEEECSSSEEEEEEEC----------SSCEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCE
T ss_pred EEEEEEccCCCeEEEEEE----------CCEEEEEEEEEeecccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcE
Confidence 699999999999999998 6788866543211110 01233 23467788999999999999999999
Q ss_pred eEEcccCCC
Q 023529 98 VCLAVSGVN 106 (281)
Q Consensus 98 Igig~~G~~ 106 (281)
|.++ .||.
T Consensus 72 Ia~~-~GPG 79 (330)
T 2ivn_A 72 IAFS-QGPG 79 (330)
T ss_dssp EEEE-EESS
T ss_pred EEEE-CCCC
Confidence 8764 3444
No 60
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=97.10 E-value=0.074 Score=49.25 Aligned_cols=86 Identities=15% Similarity=0.157 Sum_probs=66.7
Q ss_pred ChhhHHHHhccCCChH---HhhcchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCc
Q 023529 156 SPDELIGWTYVDPSWA---RIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGV 232 (281)
Q Consensus 156 s~~~l~~~~~~~~~~~---~~a~~a~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv 232 (281)
+.+++...+++.+..- .+..-.++|.+++++||+.|+-.++-.+..+.+-|..+.-.++ +.+.||+.||+
T Consensus 268 s~~ev~~~Lnk~SGLlGlsG~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~aa~Lg-------gvDaIVFTgGI 340 (415)
T 2e1z_A 268 TLSDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLH-------RLDGIIFTGGI 340 (415)
T ss_dssp CHHHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTTCS-------SCCEEEEEHHH
T ss_pred CHHHHHHHHhhccCcEEecCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCEEEECccc
Confidence 6677777676654211 1123358898888999999999999999999999999999886 37899999999
Q ss_pred ccCcchhhhHHHHHHHHH
Q 023529 233 LEANRRWDIGREVVKCIL 250 (281)
Q Consensus 233 ~~~~~~~~l~~~i~~~l~ 250 (281)
.++.+. +++.+.+.|.
T Consensus 341 GEns~~--vR~~i~~~l~ 356 (415)
T 2e1z_A 341 GENSVL--IRQLVIEHLG 356 (415)
T ss_dssp HHHCHH--HHHHHHHTTG
T ss_pred cccCHH--HHHHHHhhHh
Confidence 987762 7777777664
No 61
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.86 E-value=0.24 Score=44.50 Aligned_cols=228 Identities=13% Similarity=0.163 Sum_probs=119.8
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCC-CccCCHH----HHHHHHHHHHHHHHHHcCCCccccc
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN-HNSVGED----AARETIEKVMADALLKSGSNRSAVR 96 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~-~~~~~~~----~~~~~i~~~i~~~l~~~g~~~~~i~ 96 (281)
.+++|||--...+.++|++ +++++...+..-.. ..-.-|+ .=.+.+..+|++++++++++..++.
T Consensus 6 M~iLgIdts~~~~svAl~~----------~~~i~~~~~~~~~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did 75 (334)
T 3eno_A 6 MIVLGLEGTAHTISCGIID----------ESRILAMESSMYRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDID 75 (334)
T ss_dssp CEEEEEECSSSEEEEEEEE----------SSCCCEEEEEECCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCC
T ss_pred ceEEEEECCCcCeEEEEEE----------CCEEEEEEEEeeccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 3899999988889999998 67888765432111 1001122 2246788999999999999999999
Q ss_pred eeEEcccCCCChhhHH---HHHHhhc-HH---------HHHHHHHHHHHHh--------hcCCC----------------
Q 023529 97 AVCLAVSGVNHPTDQQ---RILNWLS-GY---------GIAAQALTAVIRA--------YDGRG---------------- 139 (281)
Q Consensus 97 ~Igig~~G~~~~~~~~---~l~~~~s-g~---------~iG~~~l~~~~~~--------~dg~~---------------- 139 (281)
+|+++. ||....... .+.+-++ ++ -.+|..-...... .||..
T Consensus 76 ~Iav~~-gPG~~t~lrvg~~~ak~La~~~~~Pl~~v~hl~aHa~sa~~~s~~~~pl~L~vsGg~t~l~~~~~~~~~~lg~ 154 (334)
T 3eno_A 76 LIGFSM-GPGLAPSLRVTATAARTISVLTGKPIIGVNHPLGHIEIGRRVTGAIDPVMLYVSGGNTQVIAHVNGRYRVLGE 154 (334)
T ss_dssp EEEEEC-SSSCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHHHHHHHTCSSCEEEEESSSCEEEEEECSSBEEEEEE
T ss_pred EEEEEc-CCCCcchHHHHHHHHHHHhhccCCCeEEeccHHHHHHHHHhcCCCCCCEEEEEECCCcEEEEEeCCEEEEecc
Confidence 998775 443322100 0000000 00 0111100000000 01110
Q ss_pred ----CCchhHHHHHHhcCCCCh--hhHHHHhccCC-----Ch----HHh--hcchHHHHHHHHhCCH---HHHHHHHHHH
Q 023529 140 ----PDTMLTSNILSTLELSSP--DELIGWTYVDP-----SW----ARI--AALVPVVVSCAEAGDE---VANKILQDSV 199 (281)
Q Consensus 140 ----~~~~l~~~~~~~~~~~s~--~~l~~~~~~~~-----~~----~~~--a~~a~~v~~~A~~GD~---~A~~il~~aa 199 (281)
..+.+...+...+|+..+ ..+...+.... +. ..+ ..+-..+....++|.+ .|..+-+..+
T Consensus 155 t~d~S~G~~fD~vA~~LGl~y~g~~~le~lA~~g~~~~~~~~~~~~~~~sfsgl~~~v~~~l~~g~~~~diAasfq~~l~ 234 (334)
T 3eno_A 155 TLDIGIGNMIDKFAREAGIPFPGGPEIEKLAMKGTKLLDLPYSVKGMDTAFSGILTAALQYLKTGQAIEDISYSIQETAF 234 (334)
T ss_dssp BSSCCHHHHHHHHHTTTTCCSCHHHHHHTTGGGCCSCCCCCCCEETTEECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCCCCceeccCceEchHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 112334555566665332 22222221110 00 001 1112234444445532 4555556666
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceee-----CCCCC-hhHHHHHHH
Q 023529 200 EELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPI-----RPKVE-PAVGAALLA 273 (281)
Q Consensus 200 ~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~-----~~~~~-~~~GAa~la 273 (281)
+.|...+..+....+ ...|+|+|||+.+.. +.+.+.+.+.++ .+++. ++.+. ..+|++.+.
T Consensus 235 ~~l~~~~~~a~~~~g--------~~~vvlsGGVa~N~~---L~~~L~~~l~~~--g~~v~~p~~~~~~D~G~~iG~a~~~ 301 (334)
T 3eno_A 235 AMLVEVLERALYVSG--------KDEILMAGGVALNRR---LRDMVTNMAREA--GIRSYLTDREYCMDNGIMIAQAALL 301 (334)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESSGGGCHH---HHHHHHHHHHHH--TSEEECCCTTTTSCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC--------CCeEEEcCCHHHHHH---HHHHHHHHHHHc--CCEEEecCCCCCChHHHHHHHHHHH
Confidence 777777777777677 678999999998853 788898888664 12222 23343 567877654
No 62
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=96.77 E-value=0.0023 Score=55.60 Aligned_cols=67 Identities=15% Similarity=0.091 Sum_probs=47.5
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeE
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Ig 99 (281)
|....+.||+|.|+++.+++| +++++.+.+.++... ...++....+.+.++. +..++.+|.
T Consensus 1 ~~~M~L~IDIGNT~ik~gl~~----------~~~l~~~~r~~T~~~--~t~de~~~~l~~l~~~-------~~~~i~~i~ 61 (249)
T 3bex_A 1 MDPMYLLVDVGNTHSVFSITE----------DGKTFRRWRLSTGVF--QTEDELFSHLHPLLGD-------AMREIKGIG 61 (249)
T ss_dssp CCCEEEEEEECSSEEEEEEES----------SSSSCEEEEEECCTT--CCHHHHHHHHHHHHGG-------GGGGEEEEE
T ss_pred CCceEEEEEECCCeEEEEEEE----------CCEEEEEEEecCCCC--CCHHHHHHHHHHHHhh-------ccccCCEEE
Confidence 344689999999999999998 678888777765332 4667766565554442 234678888
Q ss_pred EcccCC
Q 023529 100 LAVSGV 105 (281)
Q Consensus 100 ig~~G~ 105 (281)
++.+++
T Consensus 62 IsSVvp 67 (249)
T 3bex_A 62 VASVVP 67 (249)
T ss_dssp EEESCH
T ss_pred EEcCcH
Confidence 888764
No 63
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=95.64 E-value=0.032 Score=48.87 Aligned_cols=65 Identities=18% Similarity=0.136 Sum_probs=48.4
Q ss_pred EEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEccc
Q 023529 24 ILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVS 103 (281)
Q Consensus 24 viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig~~ 103 (281)
++.||+|.|+++++++| +++++...+.++... ...++... .+.++++..+++..++.++.++.+
T Consensus 2 lL~IDIGNT~ik~gl~~----------~~~l~~~~r~~T~~~--~t~de~~~----~l~~ll~~~~~~~~~i~~iiISSV 65 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE----------EGELRQHWRMETDRH--KTEDEYGM----LVKQLLEHEGLSFEDVKGIIVSSV 65 (268)
T ss_dssp EEEEEECSSEEEEEEEE----------TTEEEEEEEEECCTT--CCHHHHHH----HHHHHHHHTTCCGGGCCEEEEEES
T ss_pred EEEEEECcCcEEEEEEE----------CCEEEEEEEecCCCc--CCHHHHHH----HHHHHHHHcCCCcccCcEEEEEcc
Confidence 68999999999999999 678888777765332 35566544 445666677777778888888776
Q ss_pred C
Q 023529 104 G 104 (281)
Q Consensus 104 G 104 (281)
.
T Consensus 66 v 66 (268)
T 2h3g_X 66 V 66 (268)
T ss_dssp C
T ss_pred C
Confidence 4
No 64
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=95.48 E-value=0.046 Score=50.69 Aligned_cols=86 Identities=14% Similarity=0.081 Sum_probs=58.2
Q ss_pred ChhhHHHHhccCCCh---HHhhcchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCc
Q 023529 156 SPDELIGWTYVDPSW---ARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGV 232 (281)
Q Consensus 156 s~~~l~~~~~~~~~~---~~~a~~a~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv 232 (281)
|.+++...+++.+.. ..+....++|-+ +.+||+.|+..++-.+..+++-|..+.-.++ .+.+.||+.||+
T Consensus 277 s~~ei~~~Lnk~SGLlglsG~S~D~R~le~-~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~------G~vDaIVFTgGI 349 (415)
T 3sk3_A 277 SVDQINKMLTKESGLLGLTEVTSDCRYVED-NYATKEDAKRAMDVYCHRLAKYIGSYTALMD------GRLDAVVFTGGI 349 (415)
T ss_dssp CHHHHHHHC------CCSTTTTCGGGCSSC-CCCCHHHHHHHHHHHHHHHHHHHHHGGGGST------TCCCEEEEEHHH
T ss_pred CHHHHHHHHhcCcCcccccCCcchHHHHHH-HHcCCHhHHHHHHHHHHHHHHHHHHHHHHhC------CCCCEEEECCcc
Confidence 566666666654311 111222355533 3468999999999999999999999999886 115799999999
Q ss_pred ccCcchhhhHHHHHHHHH
Q 023529 233 LEANRRWDIGREVVKCIL 250 (281)
Q Consensus 233 ~~~~~~~~l~~~i~~~l~ 250 (281)
.++.+ .+++.+.+.|.
T Consensus 350 GEns~--~vR~~v~~~l~ 365 (415)
T 3sk3_A 350 GENAA--MVRELSLGKLG 365 (415)
T ss_dssp HTTCH--HHHHHHHHTCG
T ss_pred ccCCH--HHHHHHHhhch
Confidence 99876 27777766554
No 65
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=95.43 E-value=0.03 Score=54.72 Aligned_cols=75 Identities=12% Similarity=0.028 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCC---ceeeCCCCChhHH
Q 023529 192 NKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPG---AVPIRPKVEPAVG 268 (281)
Q Consensus 192 ~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~---~~i~~~~~~~~~G 268 (281)
++-++.+-..+.-++..++...+++ ...-+.|+|.|+...+-+ ....+.=- .+|. -++....+.+..|
T Consensus 507 Ir~~qlAKaAi~agi~~Ll~~~gi~---~~di~~v~lAGaFG~~l~---~~~a~~iG---llP~~~~~ki~~vGN~sl~G 577 (631)
T 3zyy_X 507 IQNLIRAKAAIFAGVRTMLAMVDLP---LEAIDRVIIAGGFGKYLN---IKDAITIG---LLPDIDINKFSYVGNSSLKG 577 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCC---GGGCCEEEEESSSCSEEE---HHHHHHHT---SSCCSCGGGEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCC---HHHccEEEEeccccccCC---HHHHhhcC---CCCCccccCEEEECcHHHHH
Confidence 3446777777788888888888753 122469999999998866 33333322 2354 3566667889999
Q ss_pred HHHHHHh
Q 023529 269 AALLAWN 275 (281)
Q Consensus 269 Aa~la~~ 275 (281)
|.+..++
T Consensus 578 A~~~Lls 584 (631)
T 3zyy_X 578 ARKALLS 584 (631)
T ss_dssp HHHHHHB
T ss_pred HHHHhCC
Confidence 9887764
No 66
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=94.83 E-value=0.1 Score=48.17 Aligned_cols=86 Identities=17% Similarity=0.132 Sum_probs=66.5
Q ss_pred ChhhHHHHhccCCChH----HhhcchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcC
Q 023529 156 SPDELIGWTYVDPSWA----RIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGG 231 (281)
Q Consensus 156 s~~~l~~~~~~~~~~~----~~a~~a~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGg 231 (281)
|.+++...+++.+..- .+..-.++|.+++++||+.|+-.++-.+..+.+-|..+.-.++ +.+.||+.||
T Consensus 259 s~~ei~~~Lnk~SGLlgls~G~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~~a~Lg-------gvDaIVFTgG 331 (403)
T 2iir_A 259 SPQEMYDILNKKSGVYGLSKGFSSDMRDIEEAALKGDEWCKLVLEIYDYRIAKYIGAYAAAMN-------GVDAIVFTAG 331 (403)
T ss_dssp CHHHHHHHHHHSCHHHHHTTTSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHT-------CCSEEEEEHH
T ss_pred CHHHHHHHHhhcCCeeEecCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCEEEECcc
Confidence 6777777777654211 1123468898888999999999999999999999988888887 2789999999
Q ss_pred cccCcchhhhHHHHHHHHH
Q 023529 232 VLEANRRWDIGREVVKCIL 250 (281)
Q Consensus 232 v~~~~~~~~l~~~i~~~l~ 250 (281)
+.++.+. +++.+.+.+.
T Consensus 332 IGEns~~--vR~~i~~~l~ 348 (403)
T 2iir_A 332 VGENSPI--TREDVCSYLE 348 (403)
T ss_dssp HHTTCHH--HHHHHHHTTG
T ss_pred cccCCHH--HHHHHHhhhh
Confidence 9988763 7777776654
No 67
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=94.46 E-value=0.17 Score=46.25 Aligned_cols=86 Identities=19% Similarity=0.176 Sum_probs=66.9
Q ss_pred ChhhHHHHhccCCChHHh--hcchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcc
Q 023529 156 SPDELIGWTYVDPSWARI--AALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVL 233 (281)
Q Consensus 156 s~~~l~~~~~~~~~~~~~--a~~a~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~ 233 (281)
+.+++...+++.+..-.+ ..-.++|.+++++||+.|+-.++-.+..+++-|..+.-.++ +.+.||+.||+.
T Consensus 252 s~~ei~~~Lnk~sGLlg~sGs~D~R~l~~~~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~-------gvDaIVFTgGIg 324 (384)
T 3khy_A 252 SVTEITNMLNKQSGLLGICGHNDMREVSQLAAKGDSLAKLAIEIFSHRVAKFVASYMIYFN-------KLDALVFTGGIG 324 (384)
T ss_dssp CHHHHHHHHHHSCHHHHHHSCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHGGGCS-------SCCEEEEEHHHH
T ss_pred CHHHHHHHHhcccceEEecCCCcHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCEEEECCccc
Confidence 677777777665421111 12358898899999999999999999999999999998887 288999999999
Q ss_pred cCcchhhhHHHHHHHHH
Q 023529 234 EANRRWDIGREVVKCIL 250 (281)
Q Consensus 234 ~~~~~~~l~~~i~~~l~ 250 (281)
++.+. +++.+.+.+.
T Consensus 325 Ens~~--iR~~i~~~l~ 339 (384)
T 3khy_A 325 ENAAN--IRKNIISKLA 339 (384)
T ss_dssp HHCHH--HHHHHHHHTG
T ss_pred cCcHH--HHHHHHhhcc
Confidence 87662 7777777664
No 68
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=94.43 E-value=0.085 Score=48.78 Aligned_cols=86 Identities=12% Similarity=0.067 Sum_probs=66.3
Q ss_pred ChhhHHHHhccCCChH---HhhcchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCc
Q 023529 156 SPDELIGWTYVDPSWA---RIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGV 232 (281)
Q Consensus 156 s~~~l~~~~~~~~~~~---~~a~~a~~v~~~A~~GD~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv 232 (281)
|.+++...+++.+..- .+..-.++|.+++++||+.|+-.++-.+..+++-|..+.-.++ +.+.||+.||+
T Consensus 260 s~~ei~~~Lnk~SGLlglsG~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~~a~Lg-------gvDaiVFTgGI 332 (408)
T 1g99_A 260 TTREIDTLMNKKSGVLGVSGLSNDFRDLDEAASKGNRKAELALEIFAYKVKKFIGEYSAVLN-------GADAVVFTAGI 332 (408)
T ss_dssp CHHHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTT-------SCSEEEEEHHH
T ss_pred CHHHHHHHHhhcCCceEecCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhhC-------CCCEEEECccc
Confidence 6777777777654211 1123358898888999999999999999999999999988886 37899999999
Q ss_pred ccCcchhhhHHHHHHHHH
Q 023529 233 LEANRRWDIGREVVKCIL 250 (281)
Q Consensus 233 ~~~~~~~~l~~~i~~~l~ 250 (281)
.++.+. +++.+.+.|.
T Consensus 333 GEns~~--vR~~i~~~l~ 348 (408)
T 1g99_A 333 GENSAS--IRKRILTGLD 348 (408)
T ss_dssp HHHCHH--HHHHHHTTCG
T ss_pred cccCHH--HHHHHHhhhh
Confidence 987662 6777766654
No 69
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=94.16 E-value=0.14 Score=47.46 Aligned_cols=75 Identities=13% Similarity=0.133 Sum_probs=53.8
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCC-CeEEEEecCCCCCc---cCCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPL-PVLARAAAGCSNHN---SVGEDAARETIEKVMADALLKSGSNRSAVR 96 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g-~il~~~~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~ 96 (281)
..+++|+|+|.|++++++.... .+| ++++....|+.... -.+.+++.+.|.++++++-..++. ++.
T Consensus 7 ~~~ivglDIGts~I~~vv~~~~-------~~~~~i~g~~~~~s~gv~~G~I~di~~~~~~I~~av~~ae~~~g~---~i~ 76 (419)
T 4a2a_A 7 TVFYTSIDIGSRYIKGLVLGKR-------DQEWEALAFSSVKSRGLDEGEIKDAIAFKESVNTLLKELEEQLQK---SLR 76 (419)
T ss_dssp CCEEEEEEECSSEEEEEEEEC-----------CEEEEEEEEECCSEETTEESBHHHHHHHHHHHHHHHHHHHTS---CCC
T ss_pred CCEEEEEEccCCEEEEEEEEEc-------CCCCEEEEEEEeccCCeeCCEEEcHHHHHHHHHHHHHHHHHHcCC---CcC
Confidence 3589999999999999998741 123 78887777643221 136788888888888887666665 466
Q ss_pred e-eEEcccCC
Q 023529 97 A-VCLAVSGV 105 (281)
Q Consensus 97 ~-Igig~~G~ 105 (281)
. |.+|+||.
T Consensus 77 ~~v~v~i~g~ 86 (419)
T 4a2a_A 77 SDFVISFSSV 86 (419)
T ss_dssp SEEEEEECCT
T ss_pred ceEEEEEcCC
Confidence 7 88899987
No 70
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=93.96 E-value=0.22 Score=41.97 Aligned_cols=66 Identities=17% Similarity=0.268 Sum_probs=51.0
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEcc
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig~ 102 (281)
.+++||--...+.+++++ +|+++.+.......+ .+.+..+|++++++++++..++.+|.++.
T Consensus 3 ~iLaIdTS~~~~svAl~~----------~~~~~~~~~~~~~~H--------s~~L~p~i~~~L~~a~~~~~dld~Iav~~ 64 (213)
T 3r6m_A 3 KILAIDTATENCSVALLV----------NDQVISRSEVAPRDH--------TKKVLPMVDEVLKEAGLTLQDLDALAFGR 64 (213)
T ss_dssp CEEEEECSSSEEEEEEES----------SSCEEEEEEECCSCC--------HHHHHHHHHHHHHTTTCCTTTCSEEEEEE
T ss_pred EEEEEEccCcceEEEEEE----------CCEEEEEEEechHHH--------HHHHHHHHHHHHHHcCCCHHHccEEEEec
Confidence 589999998899999998 788888765432222 24666789999999999999999987765
Q ss_pred cCCCC
Q 023529 103 SGVNH 107 (281)
Q Consensus 103 ~G~~~ 107 (281)
||..
T Consensus 65 -GPGs 68 (213)
T 3r6m_A 65 -GPGS 68 (213)
T ss_dssp -ESSC
T ss_pred -CCCc
Confidence 4433
No 71
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=93.96 E-value=0.22 Score=45.76 Aligned_cols=86 Identities=6% Similarity=0.062 Sum_probs=65.5
Q ss_pred ChhhHHHHhccCCChHHh---hcchHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEE
Q 023529 156 SPDELIGWTYVDPSWARI---AALVPVVVSCAEAGD---EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMV 229 (281)
Q Consensus 156 s~~~l~~~~~~~~~~~~~---a~~a~~v~~~A~~GD---~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLg 229 (281)
+.+++...+++.+..-.+ ..-.++|.+++++|| +.|+-.++-.+..+++-|..+...++ ..+.||+.
T Consensus 261 s~~ei~~~Lnk~SGLlglsG~s~D~R~i~~~~~~gd~~~~~A~lA~d~f~yri~k~IGa~aa~L~-------GvDaIVFT 333 (404)
T 4h0o_A 261 GIEKVVDILNKKSGLLGVSELSSDMRDILHEIETRGPKAKTCQLAFDVYIKQLAKTIGGLMVEIG-------GLDLLVFT 333 (404)
T ss_dssp CHHHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHT-------CCSEEEEE
T ss_pred CHHHHHHHHhcccccEEecCCCCCHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCEEEEC
Confidence 567777777665421111 233588988899999 99999999999999999988888877 27899999
Q ss_pred cCcccCcchhhhHHHHHHHHH
Q 023529 230 GGVLEANRRWDIGREVVKCIL 250 (281)
Q Consensus 230 Ggv~~~~~~~~l~~~i~~~l~ 250 (281)
||+.++.+. +++.+.+.+.
T Consensus 334 gGIGEns~~--vR~~i~~~l~ 352 (404)
T 4h0o_A 334 DQMGLEVWQ--VRKAICDKMK 352 (404)
T ss_dssp HHHHHHCHH--HHHHHHHHTG
T ss_pred CccccCcHH--HHHHHHhhhh
Confidence 999987662 7777777664
No 72
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=93.63 E-value=0.1 Score=50.04 Aligned_cols=64 Identities=19% Similarity=0.162 Sum_probs=47.6
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCC--CeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccc
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPL--PVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g--~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~ 94 (281)
|+|++|+|+|.|+|.+++... .+| ++++....++... .|.-.-+..+.+.+++++++++...++
T Consensus 1 m~~i~GiDIGnsttev~l~~~--------~~g~i~~l~~g~~~ttGi--KGt~~Ni~g~~~si~~a~~~a~~~~~d 66 (607)
T 1nbw_A 1 MPLIAGIDIGNATTEVALASD--------YPQARAFVASGIVATTGM--KGTRDNIAGTLAALEQALAKTPWSMSD 66 (607)
T ss_dssp -CEEEEEEECSSEEEEEEEEC--------BTTBCCCCEEEEEECCSS--TTSGGGHHHHHHHHHHHHTTSSCCGGG
T ss_pred CcEEEEEEecCceEEEEEEEE--------cCCeEEEEEeecccCCcc--ceeeeCHHHHHHHHHHHHHHhCCcccC
Confidence 479999999999999999875 134 6688888887665 244444567778888899888877543
No 73
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=92.11 E-value=0.59 Score=39.67 Aligned_cols=66 Identities=18% Similarity=0.198 Sum_probs=49.6
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEcc
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig~ 102 (281)
++++||--...+.+++++ +|+++.+.......+ .+.+..+|++++++++++..++.+|.++.
T Consensus 2 ~iL~idTs~~~~sval~~----------~~~~~~~~~~~~~~h--------~~~l~~~i~~~L~~a~~~~~did~Iav~~ 63 (231)
T 2gel_A 2 RILAIDTATEACSVALWN----------NGTINAHFELCPREH--------TQRILPMVQEILAASGASLNEIDALAFGR 63 (231)
T ss_dssp EEEEEECSSSEEEEEEEE----------TTEEEEEEEECCSCC--------HHHHHHHHHHHHHHTTCCGGGCSEEEEEC
T ss_pred eEEEEECCCcCeEEEEEE----------CCEEEEEEhhhhHHH--------HHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 689999988889999998 677776544332222 24577889999999999999999987765
Q ss_pred cCCCC
Q 023529 103 SGVNH 107 (281)
Q Consensus 103 ~G~~~ 107 (281)
||..
T Consensus 64 -GPGs 67 (231)
T 2gel_A 64 -GPGS 67 (231)
T ss_dssp -CSSC
T ss_pred -CCCh
Confidence 4434
No 74
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=91.56 E-value=1 Score=44.99 Aligned_cols=89 Identities=12% Similarity=0.066 Sum_probs=59.1
Q ss_pred HHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCC
Q 023529 178 PVVVSCAEAGD---EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYP 254 (281)
Q Consensus 178 ~~v~~~A~~GD---~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p 254 (281)
+.+.+...+|. ..|..+-+..++.|+..+..+....+ ...|+|+|||+.+.. +.+.+.+.+.++
T Consensus 654 ~~~~~~l~~g~~~~dIAasFq~ala~~L~~~~~~a~~~~g--------~~~VvLsGGVa~N~~---Lr~~L~~~l~~~-- 720 (761)
T 3vth_A 654 RQIYEDYMKGFEKSYISAKFHNTVVNFTYDLANLIRKETG--------INKVVLSGGSFQNRY---LLRRLIEKLSLS-- 720 (761)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEESGGGGSHH---HHHHHHHHHHHT--
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEECcHHHHHH---HHHHHHHHHHhC--
Confidence 33444334452 35666666667777777777777777 568999999998854 889999988764
Q ss_pred CceeeC-----CCCC-hhHHHHHHHHhhhhc
Q 023529 255 GAVPIR-----PKVE-PAVGAALLAWNSFMN 279 (281)
Q Consensus 255 ~~~i~~-----~~~~-~~~GAa~la~~~~~~ 279 (281)
.+++.. +.+. ..+|.++.|...+..
T Consensus 721 g~~v~~p~~~p~~DgGialGQA~~a~~~~~~ 751 (761)
T 3vth_A 721 GFEVYSNSKVPCNDGGISLGQAVIANKILEG 751 (761)
T ss_dssp TCEEEECSSSCSSGGGHHHHHHHHHHHHHTS
T ss_pred CCEEEecCCCCCCchHHHHHHHHHHHHHhcc
Confidence 233322 2343 369999988765543
No 75
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=91.31 E-value=0.67 Score=42.13 Aligned_cols=76 Identities=16% Similarity=0.052 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhC-CCceee---CCCCC
Q 023529 189 EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY-PGAVPI---RPKVE 264 (281)
Q Consensus 189 ~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~-p~~~i~---~~~~~ 264 (281)
..|..++...++-++..........+ ...|+++||.+..++. +.+.+.+.+.--. ...++. .+++.
T Consensus 280 DIa~gll~sVa~~I~~lA~l~A~~~~--------i~~IvftGgfla~n~~--~~~~L~~~l~~ws~g~~~~~~~~~~~y~ 349 (360)
T 2i7n_A 280 DLARATLVTITNNIGSIARMCALNEN--------IDRVVFVGNFLRINMV--SMKLLAYAMDFWSKGQLKALFLEHEGYF 349 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT--------CCCEEEESGGGCSSSH--HHHHHHHHHHHHTTTSCCEEEETTTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC--------CCeEEEeCcccccCHH--HHHHHHHHHhhhhcCCeeEEEcCCccHH
Confidence 35777888888887777766667777 4579999995544452 7888888875311 122222 35677
Q ss_pred hhHHHHHHHH
Q 023529 265 PAVGAALLAW 274 (281)
Q Consensus 265 ~~~GAa~la~ 274 (281)
+++||++.++
T Consensus 350 GAlGAaL~~~ 359 (360)
T 2i7n_A 350 GAVGALLELF 359 (360)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 8999998764
No 76
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=91.19 E-value=10 Score=35.88 Aligned_cols=208 Identities=13% Similarity=0.163 Sum_probs=110.9
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCc-----cCCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHN-----SVGEDAARETIEKVMADALLKSGSNRSAVR 96 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~ 96 (281)
.+++|||.....+.+++++- ++++++.......... +.....-.+++..++++++++ ++..++.
T Consensus 6 m~iL~i~ts~~~~~~al~~~---------~~~~~~~~~~~~~~~~gg~~p~~a~~~h~~~l~~~i~~~l~~--~~~~~id 74 (540)
T 3en9_A 6 MICLGLEGTAEKTGVGIVTS---------DGEVLFNKTIMYKPPKQGINPREAADHHAETFPKLIKEAFEV--VDKNEID 74 (540)
T ss_dssp CEEEEEECSSSEEEEEEEET---------TSCEEEEEEEECCCCCSSSSCCCHHHHHHHHHHHHHHHHHHH--SCGGGCC
T ss_pred ceEEEEEcCccceEEEEEEC---------CCeEEEEEEEeecCCCCCCChHHHHHHHHHHHHHHHHHHHHh--CCHhHCc
Confidence 48999999999999999982 4478876654321000 011133356788899999988 7788899
Q ss_pred eeEEcc-cCCCChhhH-----HHHH-Hhh---cH--HHHHHHHHHHHHHh---------hcCCC----------------
Q 023529 97 AVCLAV-SGVNHPTDQ-----QRIL-NWL---SG--YGIAAQALTAVIRA---------YDGRG---------------- 139 (281)
Q Consensus 97 ~Igig~-~G~~~~~~~-----~~l~-~~~---sg--~~iG~~~l~~~~~~---------~dg~~---------------- 139 (281)
+|+++. ||....-.. ..+. .|- -+ .-.+|.... .... .+|..
T Consensus 75 ~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~v~h~~aH~~~~-~~~~~~~~p~~l~vsGg~t~~~~~~~~~~~~lg~ 153 (540)
T 3en9_A 75 LIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIGVNHCIAHIEIG-KLTTEAEDPLTLYVSGGNTQVIAYVSKKYRVFGE 153 (540)
T ss_dssp EEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEEEEHHHHHHHHH-HHHSSCSSCEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeEeccHHHHHHHH-HHhcCCCCCcEEEEcCCCcEEEEEeCCceEEEee
Confidence 987765 453221100 0010 000 00 001111100 0000 01100
Q ss_pred ----CCchhHHHHHHhcCCCC--hhhHHHHhccC---C--Ch----HH--hhcchHHHHHHHHhCC---HHHHHHHHHHH
Q 023529 140 ----PDTMLTSNILSTLELSS--PDELIGWTYVD---P--SW----AR--IAALVPVVVSCAEAGD---EVANKILQDSV 199 (281)
Q Consensus 140 ----~~~~l~~~~~~~~~~~s--~~~l~~~~~~~---~--~~----~~--~a~~a~~v~~~A~~GD---~~A~~il~~aa 199 (281)
..+.+...+...+|+.. ...+...+... . +. .+ ++.+-..+....+++. ..|..+-+..+
T Consensus 154 t~d~s~G~~~D~~a~~lgl~~~gg~~ie~lA~~g~~~~~~p~~~~~~~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~ 233 (540)
T 3en9_A 154 TLDIAVGNCLDQFARYVNLPHPGGPYIEELARKGKKLVDLPYTVKGMDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAF 233 (540)
T ss_dssp BSSSCHHHHHHHHHHHTTCCSSCHHHHHHHHHTCCCCCCCCCCEETTEECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred ccchHhHHHHHHHHHHcCCCCCCHHHHHHHHHcCCccCcCCCCCCCcceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 01233455666666533 23333222211 0 00 00 1112223444444442 35666666667
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhh
Q 023529 200 EELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRD 252 (281)
Q Consensus 200 ~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~ 252 (281)
+.|.+.+..+....+ ...|+++|||+.+.. +++.+.+.+.++
T Consensus 234 ~~l~~~~~~a~~~~~--------~~~~~~~GGVa~N~~---l~~~l~~~~~~~ 275 (540)
T 3en9_A 234 SMLTEITERALAHTN--------KGEVMLVGGVAANNR---LREMLKAMCEGQ 275 (540)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESGGGGCHH---HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC--------CCeEEEeCcHHhHHH---HHHHHHHHHHhc
Confidence 788888878777777 678999999998854 888898888764
No 77
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=90.73 E-value=0.52 Score=45.18 Aligned_cols=68 Identities=19% Similarity=0.122 Sum_probs=49.3
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCC--CeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccce
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPL--PVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g--~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~ 97 (281)
|.|++|||+|-++|.+++.+.. .+| +.+.+...+++... +..+-+.-+..++++++++.+.+.+++.-
T Consensus 1 m~~i~gvdign~tte~~la~~~-------~~~~~~f~~s~~~~ttg~k--gt~~n~~g~~~~l~~~~~~~~~~~~~~~l 70 (610)
T 2d0o_A 1 MRYIAGIDIGNSSTEVALATLD-------EAGALTITHSALAETTGIK--GTLRNVFGIQEALALVARGAGIAVSDISL 70 (610)
T ss_dssp CEEEEEEEECSSEEEEEEEEEC-------TTCCEEEEEEEEEECCSST--TSTTHHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred CcEEEEEecCCcchheeeeeec-------CCCceEEeeccccccCCcc--CcHHHHHHHHHHHHHHHHHcCCChhhcee
Confidence 4799999999999999987750 124 56677767776653 44444566778889999999888876544
No 78
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=90.64 E-value=0.72 Score=38.86 Aligned_cols=67 Identities=7% Similarity=-0.055 Sum_probs=49.3
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEc
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig 101 (281)
..+++||--...+.+++++ +++++ ........ .-.++|..+|++++++++++..++.+|.++
T Consensus 12 ~~iLaidTS~~~~sval~~----------~~~~l-~~~~~~~r-------~Hse~L~p~i~~~L~~a~~~~~dld~Iav~ 73 (218)
T 2a6a_A 12 HMNVLALDTSQRIRIGLRK----------GEDLF-EISYTGEK-------KHAEILPVVVKKLLDELDLKVKDLDVVGVG 73 (218)
T ss_dssp -CEEEEEECSSSEEEEEEE----------TTEEE-EEEEESCG-------GGGGHHHHHHHHHHHHHTCCGGGCSEEEEE
T ss_pred ceEEEEEcCCcCeEEEEEE----------CCEEE-EEEecchH-------HHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 4699999999999999998 67777 43322111 113567788999999999999999998776
Q ss_pred ccCCCC
Q 023529 102 VSGVNH 107 (281)
Q Consensus 102 ~~G~~~ 107 (281)
. ||..
T Consensus 74 ~-GPGs 78 (218)
T 2a6a_A 74 I-GPGG 78 (218)
T ss_dssp C-CSSC
T ss_pred c-CCCc
Confidence 5 4444
No 79
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=90.01 E-value=0.99 Score=39.70 Aligned_cols=73 Identities=16% Similarity=0.204 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCC---CCh
Q 023529 189 EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPK---VEP 265 (281)
Q Consensus 189 ~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~---~~~ 265 (281)
..|..+++..++.++.......+..+ -..|++.||.+..++ .+++.+.+.+... ..++..|+ +.+
T Consensus 211 DIaasl~~sV~~~I~~la~~~a~~~~--------i~~Vvf~Gg~l~~n~--~l~~~l~~~~~~~--~~~~~~p~~~~~~g 278 (287)
T 2ews_A 211 NKLAAVIGVVGEVVTTMAITVAREFK--------TENIVYIGSSFHNNA--LLRKVVEDYTVLR--GCKPYYVENGAFSG 278 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT--------CCEEEEESGGGTTCH--HHHHHHHHHHHHT--TCEEEECTTGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC--------CCeEEEeCCchhcCH--HHHHHHHHHHhhC--CceEEECCCccHHH
Confidence 35777777777777666666666777 346999999444444 2778888766542 34555454 447
Q ss_pred hHHHHHHH
Q 023529 266 AVGAALLA 273 (281)
Q Consensus 266 ~~GAa~la 273 (281)
++||++.+
T Consensus 279 AlGAaL~~ 286 (287)
T 2ews_A 279 AIGALYLE 286 (287)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhC
Confidence 78887753
No 80
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=89.15 E-value=0.44 Score=42.86 Aligned_cols=66 Identities=21% Similarity=0.189 Sum_probs=39.4
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCC--eEEEE--ecCCCCCc---cCCHHHHHHHHHHHHHHHHHHcCCCccc
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLP--VLARA--AAGCSNHN---SVGEDAARETIEKVMADALLKSGSNRSA 94 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~--il~~~--~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~~g~~~~~ 94 (281)
..++|||+|.|++++++.. +|+ +.... ..|+.... -.+++.+.+.|.+++ .+.+. +
T Consensus 13 ~~~vgiDiGt~~i~~~~~~----------~~~~~i~~~g~~~~ps~~~~~g~i~d~~~~~~~ik~~~----~~~~~---~ 75 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVS----------GNPPALKALASRPTPPGLLMEGMVAEPAALAQEIKELL----LEART---R 75 (377)
T ss_dssp CCCEEEEECSSEEEEEEEE----------TTTTEEEEEEEEECCTTSEETTEESCHHHHHHHHHHHH----HHHTC---C
T ss_pred CceEEEEeCCCeEEEEEEe----------CCceEEEEEEeEECCCCcccCCCcCCHHHHHHHHHHHH----HHcCC---C
Confidence 4689999999999999986 343 43333 33332111 124555555555544 44554 3
Q ss_pred cceeEEcccC
Q 023529 95 VRAVCLAVSG 104 (281)
Q Consensus 95 i~~Igig~~G 104 (281)
+..+.+++||
T Consensus 76 ~~~v~~~i~~ 85 (377)
T 2ych_A 76 KRYVVTALSN 85 (377)
T ss_dssp CCEEEEEECG
T ss_pred cceEEEEecC
Confidence 4566788888
No 81
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=88.56 E-value=1.7 Score=38.90 Aligned_cols=34 Identities=21% Similarity=0.055 Sum_probs=27.1
Q ss_pred CCCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecC
Q 023529 19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG 61 (281)
Q Consensus 19 ~~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~ 61 (281)
+|..++|+||-|.|++|+-++|. +|+++.+.+.+
T Consensus 4 ~~~~~~IavDWGTSnlRa~l~~~---------~g~vl~~~~~~ 37 (330)
T 3t69_A 4 TTAGYYAAVDWGTSSFRLWIIGE---------DGAVLAERRSA 37 (330)
T ss_dssp ----CEEEEEECSSCEEEEEECT---------TSCEEEEEEES
T ss_pred CCCCCEEEEEecchheehheecC---------CCCchhhhcCC
Confidence 35568999999999999999994 89999988765
No 82
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=85.95 E-value=0.53 Score=41.47 Aligned_cols=27 Identities=15% Similarity=0.129 Sum_probs=22.6
Q ss_pred CcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEE
Q 023529 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLAR 57 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~ 57 (281)
..+.+|||+|+|.+++++++ +++++..
T Consensus 19 ~~~~iGIDiGsTt~K~V~~~----------~~~i~~~ 45 (287)
T 2ews_A 19 SHMKVGIDAGGTLIKIVQEQ----------DNQRTFK 45 (287)
T ss_dssp --CEEEEEECSSEEEEEEEC----------SSCEEEE
T ss_pred CCeEEEEEEChhhEEEEEEc----------CCEEEEE
Confidence 35899999999999999997 7788766
No 83
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=85.53 E-value=1.5 Score=43.82 Aligned_cols=76 Identities=16% Similarity=0.124 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCcee-----eCCCCC
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVP-----IRPKVE 264 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i-----~~~~~~ 264 (281)
.|..+=+...+.|.+.+..+....+ ...|+|+|||+.+.- +.+.+.+.++++ .+++ +++++.
T Consensus 681 IAasfQ~al~~~L~~~~~~a~~~tg--------~~~VvLSGGVa~N~~---L~~~l~~~L~~~--G~~v~~p~~vP~nDg 747 (772)
T 4g9i_A 681 IAYSAHLALARAFAHTAVERAREFG--------VKNVALSGGVAYNEL---ITKMIRKVVEAN--GLNFHVTTEVPRGDN 747 (772)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTT--------CSCCCEESSTTCCHH---HHHHHHHHGGGS--SCCCCCCTTSCSSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC--------cCEEEEEchHHHHHH---HHHHHHHHHHHC--CCEEEccCCCCCCcc
Confidence 3444444456666666666666666 568999999998853 788888888764 1211 124555
Q ss_pred h-hHHHHHHHHhhhh
Q 023529 265 P-AVGAALLAWNSFM 278 (281)
Q Consensus 265 ~-~~GAa~la~~~~~ 278 (281)
+ .+|.+++|...+.
T Consensus 748 GiALGQA~iA~~~L~ 762 (772)
T 4g9i_A 748 GVNVGQAFLGGLYLE 762 (772)
T ss_dssp GHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHh
Confidence 5 5998888866554
No 84
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=85.44 E-value=1.6 Score=38.43 Aligned_cols=32 Identities=13% Similarity=0.042 Sum_probs=28.5
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecC
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG 61 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~ 61 (281)
|..++|+||-|.|++|+-++| +|+++.+.+.+
T Consensus 4 m~~~~IavDWGTs~lRa~l~~----------~g~vl~~~~~~ 35 (295)
T 3nuw_A 4 MTARYIAIDWGSTNLRAWLYQ----------GEECLESRQSE 35 (295)
T ss_dssp GGCEEEEEEECSSCEEEEEEE----------TTEEEEEEEES
T ss_pred CCccEEEEEecchheeeeeec----------CCceehhhcCC
Confidence 667999999999999999998 78999888765
No 85
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=84.80 E-value=0.99 Score=35.70 Aligned_cols=61 Identities=15% Similarity=0.057 Sum_probs=38.0
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEE-EEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLA-RAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~-~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igi 100 (281)
..++|||.|-.+|-+++.|. .|.+.. .....+.+. ..+..+ +.+.+++++ .++..|.|
T Consensus 3 mriLGiDpG~~riGvAv~d~---------~g~~a~p~~~I~~~~~---r~~~~~----~~l~~li~~-----~~~~~ivV 61 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDE---------MGWTAQGIETIKINEA---EGDYGL----SRLSELIKD-----YTIDKIVL 61 (150)
T ss_dssp EEEEEEEECSSEEEEEEECT---------TSSSEEEEEEEECBGG---GTBCCH----HHHHHHHTT-----SEEEEEEE
T ss_pred CEEEEEEccCCEEEEEEEEC---------CCCEEeeEEEEEcCCc---chHHHH----HHHHHHHHH-----cCCCEEEE
Confidence 46999999999999999995 666544 333332210 012223 334445543 35778889
Q ss_pred ccc
Q 023529 101 AVS 103 (281)
Q Consensus 101 g~~ 103 (281)
|+|
T Consensus 62 GlP 64 (150)
T 1vhx_A 62 GFP 64 (150)
T ss_dssp ECC
T ss_pred eee
Confidence 988
No 86
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=83.92 E-value=1.5 Score=34.16 Aligned_cols=22 Identities=18% Similarity=0.064 Sum_probs=20.0
Q ss_pred CCcEEEEEecCccceeeeeeec
Q 023529 20 GREVILGLDGGTTSTVCICMPV 41 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~ 41 (281)
|+..++|+|.|..+|=+++.|.
T Consensus 1 ~~~~iLglD~G~kriGvAvsd~ 22 (138)
T 1nu0_A 1 MSGTLMAFDFGTKSIGVAVGQR 22 (138)
T ss_dssp CCCEEEEEECCSSEEEEEEEET
T ss_pred CCCeEEEEEeCCCEEEEEEEcC
Confidence 6678999999999999999994
No 87
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=81.61 E-value=1 Score=40.41 Aligned_cols=71 Identities=15% Similarity=0.141 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCcee---e-C--CC
Q 023529 189 EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVP---I-R--PK 262 (281)
Q Consensus 189 ~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i---~-~--~~ 262 (281)
..|..+.++..+.|...+..++...++ . +||..|+= + + +.+.+.++ .|.+.+ . + ..
T Consensus 250 ~lA~~~~~~q~~~I~~av~~v~~~~~~-------~-~vv~aG~G----~-~-L~~~la~~----~~~~~~~~~i~~~~s~ 311 (334)
T 3cet_A 250 NIAKNYYELWKELILENVENVAEKYGS-------K-KVVITGLG----E-N-ILKDALAD----FEVISVAERYGKDVSL 311 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC-------C-EEEEESTT----H-H-HHHHHTTT----SEEEEHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC-------C-eEEEeCCc----H-H-HHHHHHhh----CCeeehhcccCccccc
Confidence 478899999999999999999877652 2 56655521 2 1 55555443 221111 1 1 24
Q ss_pred CChhHHHHHHHHhhh
Q 023529 263 VEPAVGAALLAWNSF 277 (281)
Q Consensus 263 ~~~~~GAa~la~~~~ 277 (281)
.+|.+|++.|..+.+
T Consensus 312 vapA~avA~l~~~~~ 326 (334)
T 3cet_A 312 ATPSFAVAELLKNEL 326 (334)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHhHH
Confidence 568999998865544
No 88
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=80.84 E-value=1.2 Score=41.45 Aligned_cols=72 Identities=18% Similarity=0.140 Sum_probs=52.5
Q ss_pred hHHHHHHHHhC------CHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHH
Q 023529 177 VPVVVSCAEAG------DEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCIL 250 (281)
Q Consensus 177 a~~v~~~A~~G------D~~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~ 250 (281)
.++|.+.+++| |+.|+-.++-.+..+++-|..+.-.++-. -|+.+.+.||+.||+.++.+. +++.+.+.+.
T Consensus 302 ~R~i~~~~~~g~~~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~~~-~~~G~vDaIVFTGGIGEns~~--iR~~i~~~l~ 378 (438)
T 4h0p_A 302 FGHIIQNLDPSKCSEEDHEKAKLTYAVFLDRLLNFVAQYLFKLLSE-VPIESIDGLVFSGGIGEKGAE--LRRDVLKKLA 378 (438)
T ss_dssp HHHHHHTTSTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SCGGGSCEEEEEHHHHHHCHH--HHHHHHHHTG
T ss_pred HHHHHHhhhccCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCcc-ccCCCCCEEEECCccccCcHH--HHHHHHHhHh
Confidence 47777777665 88999999999999999888888877400 000026799999999977662 7777777665
Q ss_pred h
Q 023529 251 R 251 (281)
Q Consensus 251 ~ 251 (281)
-
T Consensus 379 ~ 379 (438)
T 4h0p_A 379 W 379 (438)
T ss_dssp G
T ss_pred h
Confidence 3
No 89
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=79.39 E-value=5 Score=39.33 Aligned_cols=72 Identities=13% Similarity=0.114 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeC-----CCCC
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIR-----PKVE 264 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~-----~~~~ 264 (281)
.|..+-+..++.|+..+..+....+ ...|+|+|||+.+.. +.+.+.+.+. .+++.. +++.
T Consensus 575 IAasFh~ala~~L~~~~~ra~~~~g--------~~~VvLsGGV~~N~~---Lre~L~~~l~----g~~v~~p~~~p~~Dn 639 (657)
T 3ttc_A 575 RAWAFHDALAQGFAALMREQATMRG--------ITTLVFSGGVIHNRL---LRARLAHYLA----DFTLLFPQSLPAGDG 639 (657)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTT--------CCEEEEESGGGGCHH---HHHHHHHHTT----TSEEECCCSSCSSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC--------CCEEEEECcHHHHHH---HHHHHHHHhC----CCEEEecCCCCCCcH
Confidence 4556666666677666666666666 568999999998853 7788887775 333332 3444
Q ss_pred h-hHHHHHHHHhh
Q 023529 265 P-AVGAALLAWNS 276 (281)
Q Consensus 265 ~-~~GAa~la~~~ 276 (281)
+ .+|.++.|...
T Consensus 640 GiaLGQA~~a~~~ 652 (657)
T 3ttc_A 640 GLSLGQGVIAAAR 652 (657)
T ss_dssp GHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4 48888887543
No 90
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=78.88 E-value=1 Score=41.06 Aligned_cols=25 Identities=16% Similarity=0.348 Sum_probs=17.3
Q ss_pred hhcCCCcEEEEEecCccceeeeeee
Q 023529 16 EESGGREVILGLDGGTTSTVCICMP 40 (281)
Q Consensus 16 ~~~~~~~~viGVD~GgT~~~~~l~d 40 (281)
....|..+++|||+|.|++.++++.
T Consensus 7 ~~~~m~~~vvGIDlGTt~s~va~~~ 31 (409)
T 4gni_A 7 KAAPGERVVIGITFGNSNSSIAHTV 31 (409)
T ss_dssp ------CCEEEEEECSSEEEEEEEE
T ss_pred cCCCCCCcEEEEEcCCCeEEEEEEe
Confidence 4455778999999999999998863
No 91
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=78.62 E-value=6.8 Score=36.78 Aligned_cols=74 Identities=16% Similarity=0.068 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHH
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGA 269 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GA 269 (281)
.++.+++-.+-.+...+..+-...+ ..+..|++.||..++ +. +...+...+.. .+.+......+++||
T Consensus 378 l~RAvlEgia~~~~~~~~~l~~~~g------~~~~~i~~~GG~aks-~~--~~Qi~Adv~g~---pV~~~~~~e~~alGa 445 (501)
T 3g25_A 378 FIRATLESLCYQTRDVMEAMSKDSG------IDVQSLRVDGGAVKN-NF--IMQFQADIVNT---SVERPEIQETTALGA 445 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSS------CCCSEEEEESGGGGC-HH--HHHHHHHHHTS---EEEEESCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC------CCCcEEEEecchhcC-HH--HHHHHHHHhCC---ceEecCCCcchHHHH
Confidence 3455555555555555555543333 237789999998865 41 44544444442 233333456689999
Q ss_pred HHHHHh
Q 023529 270 ALLAWN 275 (281)
Q Consensus 270 a~la~~ 275 (281)
+++|.-
T Consensus 446 A~la~~ 451 (501)
T 3g25_A 446 AFLAGL 451 (501)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999864
No 92
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=78.31 E-value=5.7 Score=37.55 Aligned_cols=73 Identities=15% Similarity=0.057 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHH
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGA 269 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GA 269 (281)
.++.+++-.+-.+-..+..+-...+ ..+..|.+.||..++ +. +...+...+.. .+.+......+++||
T Consensus 376 i~RAvlEgia~~~r~~le~l~~~~g------~~~~~i~v~GGgaks-~~--~~Qi~ADvlg~---pV~~~~~~E~~alGA 443 (526)
T 3ezw_A 376 IIRATLESIAYQTRDVLEAMQADSG------IRLHALRVDGGAVAN-NF--LMQFQSDILGT---RVERPEVREVTALGA 443 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC------CCCSEEEEESGGGGC-HH--HHHHHHHHHTS---EEEEESCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC------CCCCEEEEECchhhC-HH--HHHHHHHHHCC---EEEeCCCCchHHHHH
Confidence 4455565555555555555544333 237889999998866 32 45554444432 222223445689999
Q ss_pred HHHHH
Q 023529 270 ALLAW 274 (281)
Q Consensus 270 a~la~ 274 (281)
|++|.
T Consensus 444 A~lA~ 448 (526)
T 3ezw_A 444 AYLAG 448 (526)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99985
No 93
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=77.90 E-value=5.3 Score=35.72 Aligned_cols=45 Identities=24% Similarity=0.295 Sum_probs=29.2
Q ss_pred CccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceee---CCCCChhHHHHHHHH
Q 023529 223 SFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPI---RPKVEPAVGAALLAW 274 (281)
Q Consensus 223 p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~---~~~~~~~~GAa~la~ 274 (281)
...|+|.||...... +.+.++ +.++..++. .|..+.+.||+++|.
T Consensus 344 i~~VvLvGG~s~~p~---l~~~l~----~~~~~~~v~~~~~p~~ava~Gaa~~a~ 391 (394)
T 3qfu_A 344 VDDIVLVGGSTRIPK---VQQLLE----SYFDGKKASKGINPDEAVAYGAAVQAG 391 (394)
T ss_dssp CCEEEEESGGGGSHH---HHHHHH----HHTTTCCCBCCSCTTTHHHHHHHHHHH
T ss_pred CCEEEEECCccccHH---HHHHHH----HHcCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 679999999886632 444444 444333332 356668899999874
No 94
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=77.65 E-value=7.4 Score=36.64 Aligned_cols=74 Identities=15% Similarity=0.043 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHH
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGA 269 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GA 269 (281)
.++.+++-.+-.+...+..+-...+ ..+..|++.||..++ +. +...+...+.. .+.+......+++||
T Consensus 375 l~RAvlEgia~~~r~~~~~l~~~~g------~~~~~i~~~GGga~s-~~--~~Qi~ADv~g~---pV~~~~~~e~~alGa 442 (510)
T 2p3r_A 375 IIRATLESIAYQTRDVLEAMQADSG------IRLHALRVDGGAVAN-NF--LMQFQSDILGT---RVERPEVREVTALGA 442 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC------CCCSEEEEESGGGGC-HH--HHHHHHHHHTS---EEEEESCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC------CCccEEEEeCchhcC-HH--HHHHHHHHhCC---ceEecCCCCcHHHHH
Confidence 4555666665555555555544323 226789999998865 42 45544444432 233333456689999
Q ss_pred HHHHHh
Q 023529 270 ALLAWN 275 (281)
Q Consensus 270 a~la~~ 275 (281)
+++|.-
T Consensus 443 A~lA~~ 448 (510)
T 2p3r_A 443 AYLAGL 448 (510)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999864
No 95
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=77.16 E-value=8.1 Score=36.16 Aligned_cols=74 Identities=23% Similarity=0.179 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHH
Q 023529 191 ANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAA 270 (281)
Q Consensus 191 A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa 270 (281)
++.+++- ++..+..++..+... .+..+..|++.||..++ +. +.+.+...+.. .+.+......+++||+
T Consensus 373 ~rAvlEg----ia~~~~~~~~~l~~~--~g~~~~~i~~~GG~a~n-~~--~~q~~Adv~g~---pV~~~~~~e~~alGaA 440 (495)
T 2dpn_A 373 ARAALEG----VAFQVRDVVLAMEEE--AGVRLKVLKADGGMAQN-RL--FLKIQADLLGV---PVAVPEVTETTALGAA 440 (495)
T ss_dssp HHHHHHH----HHHHHHHHHHHHHTT--TSCCCCCEEEESGGGGC-HH--HHHHHHHHHTS---CEEEESCSCHHHHHHH
T ss_pred HHHHHHH----HHHHHHHHHHHHHHh--cCCCCcEEEEecccccC-HH--HHHHHHHHhCC---eeEecCCcccHHHHHH
Confidence 4445554 444444444444210 11235789999998866 31 45555554432 2333334456899999
Q ss_pred HHHHhh
Q 023529 271 LLAWNS 276 (281)
Q Consensus 271 ~la~~~ 276 (281)
++|.-.
T Consensus 441 ~la~~a 446 (495)
T 2dpn_A 441 LMAGVG 446 (495)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 998643
No 96
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=76.66 E-value=13 Score=29.64 Aligned_cols=56 Identities=18% Similarity=0.121 Sum_probs=40.7
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCC------eEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcC
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLP------VLARAAAGCSNHNSVGEDAARETIEKVMADALLKSG 89 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~------il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g 89 (281)
.++|||-|-+++=.++++. +|+ .+......+... .+..+-+..|.+.+.+++++..
T Consensus 2 rILGIDPGl~~tG~gvi~~---------~g~~~~~~~~v~~G~I~t~~~--~~~~~RL~~I~~~l~~~i~~~~ 63 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAV---------EGKGALKARLLHGEVVKTSPQ--EPAKERVGRIHARVLEVLHRFR 63 (166)
T ss_dssp EEEEEECCSSEEEEEEEEE---------CSSSSSCEEEEEEEEEECCTT--SCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEccccCceEEEEEEe---------cCCccceEEEEEeCeEECCCC--CCHHHHHHHHHHHHHHHHHHhC
Confidence 6899999999999999996 554 344444433221 3556667888899999998764
No 97
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=76.38 E-value=8.8 Score=35.96 Aligned_cols=75 Identities=17% Similarity=0.116 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCC-ccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHH
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHS-FPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVG 268 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p-~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~G 268 (281)
.++.+++-.+-.+...+..+-...+ .++ ..|++.||..++ +. +...+...+.. .+.+......+++|
T Consensus 380 l~rAvlEgia~~~~~~~~~l~~~~g------~~~~~~i~~~GG~a~s-~~--~~Q~~Adv~g~---pV~~~~~~e~~alG 447 (503)
T 2w40_A 380 IVRALLEGIAFQLNEIVDSLTSDMG------IEMLHVLRCDGGMTKN-KP--FMQFNSDIINT---KIEVSKYKEVTSLG 447 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT------CSCCSCEEEESGGGGC-HH--HHHHHHHHHTS---CEEEESCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC------CCccceEEEeCccccC-HH--HHHHHHHHHCC---eEEecCCCcchHHH
Confidence 3445555555555444444433223 124 679999999866 31 45555554442 23333344568999
Q ss_pred HHHHHHhh
Q 023529 269 AALLAWNS 276 (281)
Q Consensus 269 Aa~la~~~ 276 (281)
|+++|.-.
T Consensus 448 aA~la~~~ 455 (503)
T 2w40_A 448 AAVLAGLE 455 (503)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998643
No 98
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=76.03 E-value=10 Score=35.55 Aligned_cols=75 Identities=17% Similarity=0.070 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHH
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGA 269 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GA 269 (281)
.++.+++-.+-.+...+..+-...+ ..+..|++.||..++ +. +...+...+.. .+.+......+++||
T Consensus 377 l~rAvlEgia~~~~~~~~~l~~~~g------~~~~~i~~~GG~a~s-~~--~~Qi~Adv~g~---pV~~~~~~e~~alGa 444 (504)
T 2d4w_A 377 IARAALEATAFQSREVVDAMNADSG------VDLTELRVDGGMVAN-EL--LMQFQADQLGV---DVVRPKVAETTALGA 444 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS------CCCCEEEEESGGGGC-HH--HHHHHHHHHTS---CEEEESCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC------CCcceEEEeCCcccC-HH--HHHHHHHHhCC---eEEeCCCCcchHHHH
Confidence 4555555555555555555433223 225789999999866 31 45554444432 233333455689999
Q ss_pred HHHHHhh
Q 023529 270 ALLAWNS 276 (281)
Q Consensus 270 a~la~~~ 276 (281)
+++|.-.
T Consensus 445 A~lA~~~ 451 (504)
T 2d4w_A 445 AYAAGIA 451 (504)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998643
No 99
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=75.93 E-value=8.3 Score=30.57 Aligned_cols=56 Identities=14% Similarity=0.065 Sum_probs=40.0
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCe---EEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCC
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPV---LARAAAGCSNHNSVGEDAARETIEKVMADALLKSGS 90 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~i---l~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~ 90 (281)
.++|||-|-|++=.++++. +|+. +......+. . .+..+-+..|.+.+.+++++...
T Consensus 2 ~ILGIDPGl~~tG~gvi~~---------~g~~~~~v~~G~i~t~-~--~~~~~Rl~~i~~~l~~~i~~~~P 60 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQ---------VGRQLSYLGSGCIRTK-V--DDLPSRLKLIYAGVTEIITQFQP 60 (158)
T ss_dssp EEEEEECCSSEEEEEEEEE---------ETTEEEEEEEEEEECC-C--SCHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEccCCCCeeEEEEEe---------cCCeEEEEEeeEEECC-C--CCHHHHHHHHHHHHHHHHHHcCC
Confidence 5899999999999999985 5653 334444333 2 35555667888889999988753
No 100
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=75.10 E-value=8.5 Score=36.17 Aligned_cols=74 Identities=15% Similarity=0.002 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHH
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGA 269 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GA 269 (281)
.++.+++-.+-.+...+..+-...+ ..+..|++.||..++ +. +...+...+.. .+.+......+++||
T Consensus 377 l~RAvlEgia~~~r~~~~~l~~~~g------~~~~~i~~~GGga~s-~~--~~Qi~ADv~g~---pV~~~~~~e~~alGa 444 (506)
T 3h3n_X 377 FVRATLQAVAYQSKDVIDTMKKDSG------IDIPLLKVDGGAAKN-DL--LMQFQADILDI---DVQRAANLETTALGA 444 (506)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC------SCCCEEEEESGGGGC-HH--HHHHHHHHHTS---EEEECSSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC------CCCCEEEEecccccC-HH--HHHHHHHHhCC---eEEecCCCcchhHHH
Confidence 4556666666555555555544333 226789999998765 41 44444444432 222222345689999
Q ss_pred HHHHHh
Q 023529 270 ALLAWN 275 (281)
Q Consensus 270 a~la~~ 275 (281)
+++|.-
T Consensus 445 A~lA~~ 450 (506)
T 3h3n_X 445 AYLAGL 450 (506)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999864
No 101
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=74.98 E-value=5.4 Score=29.01 Aligned_cols=56 Identities=11% Similarity=0.073 Sum_probs=35.0
Q ss_pred EEEEecCccceeeeeeecccCCCCCCCCCCeEEE--EecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEEc
Q 023529 24 ILGLDGGTTSTVCICMPVISMSDSLPDPLPVLAR--AAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (281)
Q Consensus 24 viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~--~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig 101 (281)
++|+|.|..+|=+++.|. .+.+ ++ ..... .+.+..++.|.+.+ ++. ++..|-+|
T Consensus 3 iLglD~G~kriGvAvsd~---------~~~~-A~pl~ti~~-----~~~~~~~~~l~~li----~e~-----~v~~iVvG 58 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEE---------GVPL-ASGRGYLVR-----KTLEEDVEALLDFV----RRE-----GLGKLVVG 58 (98)
T ss_dssp EEEEEESSSEEEEEEECS---------CCSS-CCCEEEEEC-----CCHHHHHHHHHHHH----HHH-----TCCEEEEE
T ss_pred EEEEEeCCCEEEEEEEeC---------CCCe-eeeeEEEEc-----cCcHHHHHHHHHHH----HHc-----CCCEEEEe
Confidence 899999999999999994 4422 22 11111 13345555555544 442 46788899
Q ss_pred cc
Q 023529 102 VS 103 (281)
Q Consensus 102 ~~ 103 (281)
+|
T Consensus 59 lP 60 (98)
T 1iv0_A 59 LP 60 (98)
T ss_dssp CC
T ss_pred ec
Confidence 88
No 102
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=74.79 E-value=11 Score=35.46 Aligned_cols=74 Identities=14% Similarity=0.068 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHH
Q 023529 191 ANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAA 270 (281)
Q Consensus 191 A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa 270 (281)
++.+++-.+-.+...+..+-. .+ ..+..|++.||..++ +. +.+.+...+.. .+.+......+++||+
T Consensus 400 ~RAvlEgia~~~r~~l~~l~~-~g------~~~~~i~~~GGgaks-~~--~~Qi~ADvlg~---pV~~~~~~e~~alGAA 466 (515)
T 3i8b_A 400 ARAFVEGLLCSQRDCLELIRS-LG------ASITRILLIGGGAKS-EA--IRTLAPSILGM---DVTRPATDEYVAIGAA 466 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TT------CCCCEEEEESGGGGC-HH--HHHHHHHHHTS---CEEEECCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cC------CCCCEEEEECchhcC-HH--HHHHHHHHhCC---ceEecCCcccHHHHHH
Confidence 444555444444444443332 22 336789999998865 42 45544444442 3333334566899999
Q ss_pred HHHHhhh
Q 023529 271 LLAWNSF 277 (281)
Q Consensus 271 ~la~~~~ 277 (281)
++|...+
T Consensus 467 ~lA~~a~ 473 (515)
T 3i8b_A 467 RQAAWVL 473 (515)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9997544
No 103
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=72.31 E-value=15 Score=34.55 Aligned_cols=73 Identities=15% Similarity=0.077 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHH
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGA 269 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GA 269 (281)
.++.+++-.+-.+...+..+-.. + ..+..|++.||..++ +. +...+...+.. .+.+......+.+||
T Consensus 375 l~rAvlEgia~~~~~~~~~l~~~-g------~~~~~i~~~GGga~s-~~--~~Qi~ADv~g~---pV~~~~~~e~~alGa 441 (508)
T 3ifr_A 375 LWRALLEAVALAFRHHVAVLDDI-G------HAPQRFFASDGGTRS-RV--WMGIMADVLQR---PVQLLANPLGSAVGA 441 (508)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-T------CCCCEEEEESGGGGC-HH--HHHHHHHHHTS---CEEEEECCSTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-C------CCCCEEEEeCCcccC-HH--HHHHHHHHhCC---eEEecCCCCchHHHH
Confidence 34555555555555555444322 3 236789999998865 42 44444444432 233333356789999
Q ss_pred HHHHHh
Q 023529 270 ALLAWN 275 (281)
Q Consensus 270 a~la~~ 275 (281)
+++|.-
T Consensus 442 A~lA~~ 447 (508)
T 3ifr_A 442 AWVAAI 447 (508)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999964
No 104
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=71.53 E-value=11 Score=33.81 Aligned_cols=48 Identities=27% Similarity=0.187 Sum_probs=35.7
Q ss_pred ccEEEEcCcccCcchhhhHHHHHHHHHhhCCC---ceeeC---CCCChhHHHHHHHH
Q 023529 224 FPLVMVGGVLEANRRWDIGREVVKCILRDYPG---AVPIR---PKVEPAVGAALLAW 274 (281)
Q Consensus 224 ~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~---~~i~~---~~~~~~~GAa~la~ 274 (281)
..|+|.||-..-.. |.+.+++.+.+..|. +++.. +...+.+||+.+|-
T Consensus 295 ~~IvLtGG~s~~pG---~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 295 ANNVMSGGTTMYPG---IADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp TCEEEESGGGCSTT---HHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred hCcEeeCCCCCCcc---HHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 36999999887754 899999999887764 45543 34557899998874
No 105
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=71.52 E-value=9.2 Score=35.77 Aligned_cols=73 Identities=21% Similarity=0.161 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHH
Q 023529 194 ILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLA 273 (281)
Q Consensus 194 il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la 273 (281)
+++..-+-++..+..++..+... + ++..|++.||..++ +. +.+.+...+.. .+.+......+++||+++|
T Consensus 369 l~rAvlEgia~~~~~~l~~l~~~---~-~~~~i~~~GG~a~s-~~--~~Qi~Adv~g~---pV~~~~~~e~~alGaA~lA 438 (497)
T 2zf5_O 369 LARATLEAIAYLTRDVVDEMEKL---V-QIKELRVDGGATAN-DF--LMQFQADILNR---KVIRPVVKETTALGAAYLA 438 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT---S-CCCCEEEESGGGGC-HH--HHHHHHHHHTS---CEEEESCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---C-CcceEEEeCccccC-HH--HHHHHHhhcCC---eEEEcCCCcchHHHHHHHH
Confidence 34444445555555555555421 1 36789999999866 31 45555554432 2333334456899999998
Q ss_pred Hhh
Q 023529 274 WNS 276 (281)
Q Consensus 274 ~~~ 276 (281)
.-.
T Consensus 439 ~~~ 441 (497)
T 2zf5_O 439 GLA 441 (497)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 106
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=71.41 E-value=14 Score=34.82 Aligned_cols=73 Identities=15% Similarity=0.048 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---cccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChh
Q 023529 190 VANKILQDSVEELALSVKAVVQR---LSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPA 266 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~---l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~ 266 (281)
.++.+++-.+-.+...+..+-.. .. .+..|++.||..++ +. +...+...+.. .+.+......++
T Consensus 397 l~RAvlEgia~~~r~~l~~l~~~~~~~g-------~~~~i~~~GGgaks-~~--~~Qi~ADvlg~---pV~~~~~~e~~a 463 (520)
T 4e1j_A 397 FARAALEAVCYQTRDLLEAMHKDWRRNG-------NDTVLRVDGGMVAS-DW--TMQRLSDLLDA---PVDRPVILETTA 463 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC------------CCEEEESGGGGC-HH--HHHHHHHHHTS---CEEEESCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCC-------CcceEEEeCccccC-HH--HHHHHHHHhCC---eEEecCCCccHH
Confidence 34555555555554444444332 11 26689999998865 42 45544444442 333333456689
Q ss_pred HHHHHHHHh
Q 023529 267 VGAALLAWN 275 (281)
Q Consensus 267 ~GAa~la~~ 275 (281)
+||+++|.-
T Consensus 464 lGAA~lA~~ 472 (520)
T 4e1j_A 464 LGVAWLAGS 472 (520)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999864
No 107
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=71.10 E-value=8.1 Score=34.73 Aligned_cols=46 Identities=26% Similarity=0.257 Sum_probs=29.3
Q ss_pred CccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceee---CCCCChhHHHHHHHHh
Q 023529 223 SFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPI---RPKVEPAVGAALLAWN 275 (281)
Q Consensus 223 p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~---~~~~~~~~GAa~la~~ 275 (281)
...|+|.||...... +.+.++ +.++..++. .|..+.+.||+++|..
T Consensus 352 i~~VvLvGG~s~~p~---l~~~l~----~~~~~~~v~~~~~p~~ava~Gaa~~a~~ 400 (404)
T 3i33_A 352 IQEIVLVGGSTRIPK---IQKLLQ----DFFNGKELNKSINPDEAVAYGAAVQAAI 400 (404)
T ss_dssp CCEEEEESGGGGCHH---HHHHHH----HHTTTCCCBCSSCTTTHHHHHHHHHHHH
T ss_pred CCEEEEECCccccHH---HHHHHH----HHcCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 567999999886632 444444 444333332 3556688999998853
No 108
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=71.09 E-value=21 Score=35.68 Aligned_cols=64 Identities=19% Similarity=0.100 Sum_probs=41.8
Q ss_pred cEEEEEecC-ccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 023529 22 EVILGLDGG-TTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (281)
Q Consensus 22 ~~viGVD~G-gT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igi 100 (281)
..++|+|-| .|.++++++|. +|+++.....-+..+. ...++..+.+ .+++.+.++ ++.+||-
T Consensus 329 ~~vlg~dpg~r~g~k~a~vd~---------~G~~l~~~~iy~~~~~-~~~~~~~~~l----~~li~~~~~---~~IaIGn 391 (785)
T 3bzc_A 329 RATLGLDPGLRTGVKVAVVDA---------TGKLLDTATVYPHAPK-NQWDQTLAVL----AALCAKHQV---ELIAIGN 391 (785)
T ss_dssp CCEEEEECCSSSCEEEEEECT---------TSCEEEEEEECCSGGG-CCHHHHHHHH----HHHHHHHTC---CEEEEES
T ss_pred CeEEEECCCCcCceEEEEECC---------CCCEEEEEEEecCCch-hHHHHHHHHH----HHHHHHcCC---CEEEECC
Confidence 479999999 69999999994 9999988877544332 2334444444 445555432 3555554
Q ss_pred cc
Q 023529 101 AV 102 (281)
Q Consensus 101 g~ 102 (281)
|.
T Consensus 392 gt 393 (785)
T 3bzc_A 392 GT 393 (785)
T ss_dssp ST
T ss_pred Cc
Confidence 43
No 109
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=68.52 E-value=17 Score=33.80 Aligned_cols=73 Identities=15% Similarity=0.115 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCC-ChhHHHHHHH
Q 023529 195 LQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKV-EPAVGAALLA 273 (281)
Q Consensus 195 l~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~-~~~~GAa~la 273 (281)
++..-+-++..+..++..+... +.++..|.+.||..++ +. +.+.+...+.. .+.+..... .+.+||+++|
T Consensus 362 ~rAvlEgia~~~~~~~~~l~~~---g~~~~~i~~~GG~a~s-~~--~~Qi~Adv~g~---pV~~~~~~e~~~alGAA~lA 432 (484)
T 2itm_A 362 ARAVLEGVGYALADGMDVVHAC---GIKPQSVTLIGGGARS-EY--WRQMLADISGQ---QLDYRTGGDVGPALGAARLA 432 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---TCCCSCEEEESGGGCC-HH--HHHHHHHHHCC---CEEEESCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc---CCCcceEEEEeccccC-HH--HHHHHHHHhCC---eEEeCCCCCcccHHHHHHHH
Confidence 3333344444444444444311 2236789999999866 31 45555554432 233333334 3799999998
Q ss_pred Hhh
Q 023529 274 WNS 276 (281)
Q Consensus 274 ~~~ 276 (281)
.-.
T Consensus 433 ~~~ 435 (484)
T 2itm_A 433 QIA 435 (484)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 110
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=68.11 E-value=17 Score=34.15 Aligned_cols=48 Identities=15% Similarity=0.214 Sum_probs=30.6
Q ss_pred CCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHHHh
Q 023529 222 HSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWN 275 (281)
Q Consensus 222 ~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la~~ 275 (281)
.+..|++.||..++ +. +...+...+.. .+.+......+++||+++|.-
T Consensus 393 ~~~~i~~~GGga~s-~~--~~Qi~ADv~g~---pV~~~~~~e~~alGaA~lA~~ 440 (504)
T 3ll3_A 393 KPVAINATGGFLKS-DF--VRQLCANIFNV---PIVTMKEQQSGTLAAMFLARQ 440 (504)
T ss_dssp CCSEEEEESGGGCS-HH--HHHHHHHHHTS---CEEEESCSCHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhcC-HH--HHHHHHHhhCC---eEEecCCCCchhHHHHHHHHH
Confidence 36789999998865 41 44444444442 233333455689999999864
No 111
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=66.72 E-value=9.4 Score=34.02 Aligned_cols=71 Identities=21% Similarity=0.238 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHHH
Q 023529 196 QDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAW 274 (281)
Q Consensus 196 ~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la~ 274 (281)
+...+.+...+...+...++. +.....|+|.||...... +.+.+++.+.. +......|..+.+.||+++|.
T Consensus 310 ~~~~~~i~~~i~~~l~~~~~~---~~~i~~IvL~GG~s~~p~---l~~~l~~~~~~--~v~~~~~p~~ava~Gaa~~a~ 380 (383)
T 1dkg_D 310 EDLVNRSIELLKVALQDAGLS---VSDIDDVILVGGQTRMPM---VQKKVAEFFGK--EPRKDVNPDEAVAIGAAVQGG 380 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTTCC---TTTCCEEEEESGGGGSHH---HHHHHHHHHSS--CCBCSSCTTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCC---HhhCCEEEEecCccccHH---HHHHHHHHhCC--CCCCCcChHHHHHHHHHHHHH
Confidence 333344444445544444321 223578999999886632 66666666642 211112356678899998864
No 112
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=66.48 E-value=15 Score=31.99 Aligned_cols=68 Identities=10% Similarity=0.233 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCC----ceee-CCCCC
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPG----AVPI-RPKVE 264 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~----~~i~-~~~~~ 264 (281)
...++++...+.+...+...+..++ .+..|+|.||.+ . + +.+.+.+.+|. +.+. .|..+
T Consensus 247 ~~~~~i~~~~~~~~~~i~~~i~~~~-------~~~~vvl~GGga---~---l---l~~~l~~~~~~~~~~~~~~~~P~~a 310 (320)
T 2zgy_A 247 IVTEAMNEALRKLEQRVLNTLNEFS-------GYTHVMVIGGGA---E---L---ICDAVKKHTQIRDERFFKTNNSQYD 310 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCC-------CCCEEEEESTTH---H---H---HHHHHHHTSCCCGGGEECCSCGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc-------CCCeEEEECChH---H---H---HHHHHHHHhCCCCCceeeCCCcHHH
Confidence 3445667777777777766665543 267899999865 1 2 55666666654 2222 25566
Q ss_pred hhHHHHHHH
Q 023529 265 PAVGAALLA 273 (281)
Q Consensus 265 ~~~GAa~la 273 (281)
.+.||+.++
T Consensus 311 ~A~G~~~~~ 319 (320)
T 2zgy_A 311 LVNGMYLIG 319 (320)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 889998764
No 113
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=63.21 E-value=13 Score=29.05 Aligned_cols=36 Identities=14% Similarity=0.246 Sum_probs=32.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHcCCCccccceeEEccc
Q 023529 68 VGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVS 103 (281)
Q Consensus 68 ~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig~~ 103 (281)
..++++.+...+++++++++.++++++|.+|-+.+.
T Consensus 44 Nt~e~I~~At~ELl~eii~~N~l~~eDIvSv~FTvT 79 (148)
T 1xho_A 44 NTADEIVAETQKLLKEMAEKNGLEEDDIISIIFTVT 79 (148)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 468999999999999999999999999999988865
No 114
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=62.92 E-value=2.7 Score=37.68 Aligned_cols=19 Identities=37% Similarity=0.522 Sum_probs=16.2
Q ss_pred cEEEEEecCccceeeeeee
Q 023529 22 EVILGLDGGTTSTVCICMP 40 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d 40 (281)
..++|||+|.|++.+++.+
T Consensus 2 ~~~vGIDlGTt~s~va~~~ 20 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIMD 20 (383)
T ss_dssp -CCCEEECCSSEEEEEEEE
T ss_pred CcEEEEEcCCCCEEEEEEE
Confidence 3689999999999998885
No 115
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=62.58 E-value=11 Score=33.10 Aligned_cols=45 Identities=16% Similarity=0.079 Sum_probs=31.1
Q ss_pred ccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceee-CCCCChhHHHHHHHH
Q 023529 224 FPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPI-RPKVEPAVGAALLAW 274 (281)
Q Consensus 224 ~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~-~~~~~~~~GAa~la~ 274 (281)
..|+|.||...... +.+.+++.+.. .+.+. .|..+.+.||+.++.
T Consensus 279 ~~IvL~GG~s~~p~---l~~~l~~~~~~---~v~~~~~p~~ava~Gaa~~a~ 324 (344)
T 1jce_A 279 RGIFLTGGGSLLRG---LDTLLQKETGI---SVIRSEEPLTAVAKGAGMVLD 324 (344)
T ss_dssp HCEEEESGGGCSBT---HHHHHHHHHSS---CEEECSSTTTHHHHHHHHGGG
T ss_pred CcEEEECccccchH---HHHHHHHHHCC---CccccCChHHHHHHHHHHHHh
Confidence 46999999887743 67777776642 23222 356678899999875
No 116
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=61.04 E-value=4.4 Score=39.14 Aligned_cols=48 Identities=19% Similarity=0.244 Sum_probs=31.8
Q ss_pred CccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHHHh
Q 023529 223 SFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWN 275 (281)
Q Consensus 223 p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la~~ 275 (281)
...|+|.||....+. +.+.+++.+.+ +......|..+.+.||++.|.-
T Consensus 334 i~~VvLvGG~sriP~---v~~~l~~~fg~--~~~~~~nPdeaVA~GAai~a~~ 381 (605)
T 4b9q_A 334 IDDVILVGGQTRMPM---VQKKVAEFFGK--EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp CSEEEEESGGGGSHH---HHHHHHHHHTS--CCCSSSCTTTHHHHHHHHHHHH
T ss_pred CcEEEEeCCccCchH---HHHHHHHHhcc--CcCCCcChhHHHHHhHHHHHHH
Confidence 568999999987732 66666666532 2122224666788999998853
No 117
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=60.94 E-value=3.7 Score=37.06 Aligned_cols=28 Identities=21% Similarity=0.113 Sum_probs=16.9
Q ss_pred ccccchhcCCCcEEEEEecCccceeeeeee
Q 023529 11 DFETAEESGGREVILGLDGGTTSTVCICMP 40 (281)
Q Consensus 11 ~~~~~~~~~~~~~viGVD~GgT~~~~~l~d 40 (281)
+|+|.-.+.| .++|||+|.|++.+++++
T Consensus 14 ~~~~l~~~~~--~viGID~GTt~s~va~~~ 41 (404)
T 3i33_A 14 GTENLYFQSM--PAIGIDLGTTYSCVGVFQ 41 (404)
T ss_dssp ---------C--CCEEEEECSSEEEEEEEE
T ss_pred CcccchhccC--CEEEEEcCCccEEEEEEE
Confidence 3444444443 689999999999998876
No 118
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=60.81 E-value=18 Score=34.24 Aligned_cols=72 Identities=13% Similarity=0.169 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHHH
Q 023529 195 LQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAW 274 (281)
Q Consensus 195 l~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la~ 274 (281)
++..-+-++..+..++..+.. .+..+..|++.||..++ +. +...+...+.. .+.+......+.+||+++|.
T Consensus 418 ~rAvlEgia~~~r~~~e~l~~---~g~~~~~i~~~GG~aks-~~--~~Qi~ADv~g~---pV~~~~~~e~~alGAA~lA~ 488 (554)
T 3l0q_A 418 YLATIQALALGTRHIIETMNQ---NGYNIDTMMASGGGTKN-PI--FVQEHANATGC---AMLLPEESEAMLLGSAMMGT 488 (554)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TTCCCCEEEEESGGGGC-HH--HHHHHHHHHCC---EEEEESCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---cCCCCCEEEEeCccccC-HH--HHHHHHHhhCC---eEEecCCCcchHHHHHHHHH
Confidence 344444555555555554432 12347789999998765 42 44444444432 23332344568899999986
Q ss_pred h
Q 023529 275 N 275 (281)
Q Consensus 275 ~ 275 (281)
-
T Consensus 489 ~ 489 (554)
T 3l0q_A 489 V 489 (554)
T ss_dssp H
T ss_pred H
Confidence 3
No 119
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=60.74 E-value=16 Score=32.07 Aligned_cols=27 Identities=11% Similarity=0.063 Sum_probs=19.0
Q ss_pred cchhcCCCcEEEEEecCccceeeeeeec
Q 023529 14 TAEESGGREVILGLDGGTTSTVCICMPV 41 (281)
Q Consensus 14 ~~~~~~~~~~viGVD~GgT~~~~~l~d~ 41 (281)
+..+..+| .+.+||+|.+++|+.+++.
T Consensus 5 ~~~~~~~m-~~a~IDiGSns~rl~I~~~ 31 (315)
T 1t6c_A 5 SLDNKPIM-RVASIDIGSYSVRLTIAQI 31 (315)
T ss_dssp -----CCE-EEEEEEECSSEEEEEEEEE
T ss_pred cccCCCCc-EEEEEEECcCcEEEEEEEE
Confidence 33333433 6889999999999999996
No 120
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=60.70 E-value=11 Score=34.10 Aligned_cols=48 Identities=25% Similarity=0.198 Sum_probs=30.2
Q ss_pred CccEEEEcCcccCcchhhhHHHHHHHHHhhCCCcee---------eCCCCChhHHHHHHHHhh
Q 023529 223 SFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVP---------IRPKVEPAVGAALLAWNS 276 (281)
Q Consensus 223 p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i---------~~~~~~~~~GAa~la~~~ 276 (281)
...|+|.||...... +.+.+++.+.. .+++ ..|..+.+.||++.+...
T Consensus 345 i~~V~LvGG~s~~p~---v~~~l~~~f~~---~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 345 VDEVIMSGGTSNTPR---IAANFRYIFPE---STRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp CCEEEEESGGGGCHH---HHHHHHHHSCT---TSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred CCEEEEECCccccHH---HHHHHHHHcCC---ccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 578999999986632 44444444322 2233 235566789999998643
No 121
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=60.38 E-value=17 Score=34.65 Aligned_cols=75 Identities=23% Similarity=0.259 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcc-cCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHH
Q 023529 194 ILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVL-EANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALL 272 (281)
Q Consensus 194 il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~-~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~l 272 (281)
+++..-+-++..+..++..+.. .+..+..|++.||.. ++ +. +...+...+.. .+.+......+++||+++
T Consensus 414 l~RAvlEgia~~~r~~~~~l~~---~g~~~~~i~~~GGga~ks-~~--~~Qi~ADv~g~---pV~~~~~~e~~alGaA~l 484 (572)
T 3jvp_A 414 IYRALLEATAFGTRAIVDAFHG---RGVEVHELYACGGLPQKN-HL--LMQIFADVTNR---EIKVAASKQTPALGAAMF 484 (572)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT---TTCCEEEEEEESSHHHHC-HH--HHHHHHHHHTS---CEEEBCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---cCCCcCEEEEEcCchhhC-HH--HHHHHHHHHCC---eeEecCCCccHHHHHHHH
Confidence 3444444444444444444431 123467899999988 55 42 44444444442 233333455689999999
Q ss_pred HHhhh
Q 023529 273 AWNSF 277 (281)
Q Consensus 273 a~~~~ 277 (281)
|.-.+
T Consensus 485 A~~a~ 489 (572)
T 3jvp_A 485 ASVAA 489 (572)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 86543
No 122
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=60.09 E-value=4.2 Score=36.42 Aligned_cols=19 Identities=32% Similarity=0.508 Sum_probs=17.1
Q ss_pred cEEEEEecCccceeeeeee
Q 023529 22 EVILGLDGGTTSTVCICMP 40 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d 40 (281)
..++|||+|.|++.+++.+
T Consensus 18 ~~viGID~GTt~s~va~~~ 36 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMK 36 (394)
T ss_dssp CSCEEEEECSSEEEEEEEC
T ss_pred CCEEEEEeCcCcEEEEEEE
Confidence 5789999999999999876
No 123
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=58.99 E-value=28 Score=32.84 Aligned_cols=75 Identities=15% Similarity=0.149 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHH
Q 023529 193 KILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALL 272 (281)
Q Consensus 193 ~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~l 272 (281)
.+++..-+-++..+..++..+... +..+..|++.||..++ +. +...+...+.. .+.+......+.+||+++
T Consensus 408 ~l~RAvlEgia~~~r~~~~~l~~~---g~~~~~i~~~GGga~s-~~--~~Qi~ADv~g~---pV~~~~~~e~~alGaA~l 478 (538)
T 4bc3_A 408 VEVRALIEGQFMAKRIHAEGLGYR---VMSKTKILATGGASHN-RE--ILQVLADVFDA---PVYVIDTANSACVGSAYR 478 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC---CCTTCCEEEEEGGGGC-HH--HHHHHHHHHTS---CEEECCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhc---CCCCCeEEEEcchhcC-HH--HHHHHHHHhCC---ceEecCCCCchHHHHHHH
Confidence 344444444555555555555421 2335678888888855 42 44444444442 233223345688999999
Q ss_pred HHhh
Q 023529 273 AWNS 276 (281)
Q Consensus 273 a~~~ 276 (281)
|.-.
T Consensus 479 A~~a 482 (538)
T 4bc3_A 479 AFHG 482 (538)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8643
No 124
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=56.80 E-value=28 Score=32.20 Aligned_cols=71 Identities=15% Similarity=0.084 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeC-CCCChhHH
Q 023529 190 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIR-PKVEPAVG 268 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~-~~~~~~~G 268 (281)
.++.+++-.+-.+...+..+-...+ ..+..|.+.||..++ +. +...+...+.. .+.. ....+.+|
T Consensus 367 l~RAvlEgia~~~r~~~~~l~~~~g------~~~~~i~~~GGgaks-~~--~~Qi~ADvlg~-----pV~~~~~e~~alG 432 (489)
T 2uyt_A 367 LARCIFDSLALLYADVLHELAQLRG------EDFSQLHIVGGGCQN-TL--LNQLCADACGI-----RVIAGPVEASTLG 432 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT------CCCSEEEEESGGGGC-HH--HHHHHHHHHTS-----EEEECCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC------CCCCEEEEeCChhhh-HH--HHHHHHHHHCC-----eeecCCccHhHHH
Confidence 4555666555555555555543222 226789999999866 32 45444444442 2332 34557899
Q ss_pred HHHHHH
Q 023529 269 AALLAW 274 (281)
Q Consensus 269 Aa~la~ 274 (281)
|+++|+
T Consensus 433 aa~~A~ 438 (489)
T 2uyt_A 433 NIGIQL 438 (489)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 966664
No 125
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=56.38 E-value=9.9 Score=36.60 Aligned_cols=72 Identities=14% Similarity=0.045 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceee-C--CCCC-hh
Q 023529 191 ANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPI-R--PKVE-PA 266 (281)
Q Consensus 191 A~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~-~--~~~~-~~ 266 (281)
|..+=+...+.|...+..+....+ ...|+|+|||+.+.. +.+.+.+ ......+. + +.+. ..
T Consensus 284 AasfQ~~l~~~L~~~~~~a~~~tg--------~~~l~LaGGVa~N~~---L~~~l~~----~~~~~~v~vpp~~~D~G~a 348 (576)
T 3ven_A 284 AATAQAALERAVFGLADSVLARTG--------ERTLFVAGGVGLNAT---MNGKLLT----RSTVDKMFVPPVASDIGVS 348 (576)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT--------CSEEEEESGGGGCHH---HHHHHHT----STTCSEEECCTTCSGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC--------CCeEEecchHHHHHH---HHHHHHH----hcCCCeEEeCCCCCchHHH
Confidence 334434445555556666666666 679999999998853 5555543 22111221 1 3444 46
Q ss_pred HHHHHHHHhhh
Q 023529 267 VGAALLAWNSF 277 (281)
Q Consensus 267 ~GAa~la~~~~ 277 (281)
+|+++.+....
T Consensus 349 iGqA~~a~~~~ 359 (576)
T 3ven_A 349 LGAAAAVAVEL 359 (576)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 99999886543
No 126
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=55.47 E-value=6 Score=37.75 Aligned_cols=46 Identities=26% Similarity=0.272 Sum_probs=29.2
Q ss_pred CccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceee---CCCCChhHHHHHHHHh
Q 023529 223 SFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPI---RPKVEPAVGAALLAWN 275 (281)
Q Consensus 223 p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~---~~~~~~~~GAa~la~~ 275 (281)
...|+|.||....+ .+++.+++.++..++. .|..+.+.||++.|..
T Consensus 331 i~~VvLvGG~srip-------~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~ 379 (554)
T 1yuw_A 331 IHDIVLVGGSTRIP-------KIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 379 (554)
T ss_dssp CCEEEEESGGGGCH-------HHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHH
T ss_pred CcEEEEECCcccCh-------HHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHH
Confidence 57899999988652 3444444444322222 3556678999998864
No 127
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=50.56 E-value=7.1 Score=37.70 Aligned_cols=49 Identities=18% Similarity=0.242 Sum_probs=31.6
Q ss_pred CCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHHHh
Q 023529 222 HSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWN 275 (281)
Q Consensus 222 ~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la~~ 275 (281)
....|+|.||....+. +.+.+++.+.. +......|..+.+.||+..|..
T Consensus 333 ~i~~VvLvGG~srip~---v~~~l~~~fg~--~~~~~~npd~aVA~GAa~~a~~ 381 (605)
T 2kho_A 333 DIDDVILVGGQTRMPM---VQKKVAEFFGK--EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp TCSEEEEESGGGGSHH---HHHHHHHHHSS--CCBCSSCTTTHHHHHHHHHHTT
T ss_pred hCceEEEECCcccChH---HHHHHHHhcCC--CcCcCCCcchHHHHHHHHHHHH
Confidence 3678999999886632 56666665532 2122223566778999998853
No 128
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=50.46 E-value=7.5 Score=38.13 Aligned_cols=48 Identities=15% Similarity=0.192 Sum_probs=30.8
Q ss_pred CccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHHHh
Q 023529 223 SFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWN 275 (281)
Q Consensus 223 p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la~~ 275 (281)
...|+|.||....+. +.+.+++.+.. +......|..+.+.||++.|..
T Consensus 335 I~~VvLvGGssriP~---v~~~l~~~fg~--~~~~~~nPdeaVA~GAa~~a~~ 382 (675)
T 3d2f_A 335 VDFVEIIGGTTRIPT---LKQSISEAFGK--PLSTTLNQDEAIAKGAAFICAI 382 (675)
T ss_dssp CCEEEEESGGGGSHH---HHHHHHHHHTS--CEECCSCTTTHHHHHHHHHHHH
T ss_pred CcEEEEECCCccChH---HHHHHHHhcCC--CccccCCcchHHHHHHHHHHHH
Confidence 568999999987632 56666655532 1111223566788999998864
No 129
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=50.30 E-value=8.5 Score=36.18 Aligned_cols=48 Identities=17% Similarity=0.210 Sum_probs=31.5
Q ss_pred CccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHHHHh
Q 023529 223 SFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWN 275 (281)
Q Consensus 223 p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~la~~ 275 (281)
...|+|.||...... +.+.+++.+.. +......|..+.+.||+..|..
T Consensus 303 i~~VvLvGG~s~~p~---v~~~l~~~f~~--~~~~~~~p~~aVa~Gaa~~a~~ 350 (509)
T 2v7y_A 303 IDKVILVGGSTRIPA---VQEAIKRELGK--EPHKGVNPDEVVAIGAAIQGGV 350 (509)
T ss_dssp CSEEEEESGGGGCHH---HHHHHHHHHSS--CCBCCSCTTTHHHHHHHHHHHH
T ss_pred CcEEEEECCcccChH---HHHHHHHHhCC--CcCcCCCchhhhHhhHHHHHHH
Confidence 568999999886632 66666665532 1112223566788999998854
No 130
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=49.95 E-value=27 Score=30.64 Aligned_cols=23 Identities=22% Similarity=0.173 Sum_probs=18.9
Q ss_pred CCCcEEEEEecCccceeeeeeec
Q 023529 19 GGREVILGLDGGTTSTVCICMPV 41 (281)
Q Consensus 19 ~~~~~viGVD~GgT~~~~~l~d~ 41 (281)
+|...+..||+|..++|..+++.
T Consensus 1 ~m~~~~A~IDiGSNsirL~I~~~ 23 (315)
T 3mdq_A 1 GMSQRIGVIDMGTNTFHLLITDI 23 (315)
T ss_dssp ---CEEEEEEECSSEEEEEEEEE
T ss_pred CCCceEEEEEecCCcEEEEEEEE
Confidence 47778999999999999999986
No 131
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=49.52 E-value=1e+02 Score=27.80 Aligned_cols=73 Identities=18% Similarity=0.092 Sum_probs=44.1
Q ss_pred cEEEEEecCccc--eeeeeeecccCCCCCCCCC--CeEEEEecCCC-----------CCccCCHHH-------HHHHHHH
Q 023529 22 EVILGLDGGTTS--TVCICMPVISMSDSLPDPL--PVLARAAAGCS-----------NHNSVGEDA-------ARETIEK 79 (281)
Q Consensus 22 ~~viGVD~GgT~--~~~~l~d~~~~~~~~~~~g--~il~~~~~~~~-----------~~~~~~~~~-------~~~~i~~ 79 (281)
.++||+=-|.+- +.+++++. +| +++.....|-+ .......++ +-+...+
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~---------~~~~~l~~~~~~py~~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~ 72 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQ---------GDRTTLLASHYLPMPAGLREDILALCVPGPDEIARAAEVEQRWVALAAQ 72 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEE---------SSSEEEEEEEEEECCHHHHHHHHHTTSCCBTHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecccChhhhhEEEEEe---------cCCceecceeeecCCHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 578888766653 67788876 33 45554444421 100011111 1234557
Q ss_pred HHHHHHHHcCCCccccceeEEcccCC
Q 023529 80 VMADALLKSGSNRSAVRAVCLAVSGV 105 (281)
Q Consensus 80 ~i~~~l~~~g~~~~~i~~Igig~~G~ 105 (281)
++++++++.+++.++|.. ||..|.
T Consensus 73 av~~~l~~~~~~~~~Id~--IGsHGQ 96 (371)
T 3qbx_A 73 GVRELLLQQQMSPDEVRA--IGSHGQ 96 (371)
T ss_dssp HHHHHHHHTTCCGGGCCE--EEECCE
T ss_pred HHHHHHHHcCCCcccccE--EEeCCc
Confidence 788889999999888888 478775
No 132
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=48.46 E-value=24 Score=33.07 Aligned_cols=70 Identities=27% Similarity=0.289 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCcee-eCC--CCChhHHH
Q 023529 193 KILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVP-IRP--KVEPAVGA 269 (281)
Q Consensus 193 ~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i-~~~--~~~~~~GA 269 (281)
.+++..-+-++..+..++..+.. +. +..|++.||..++ +. +...+...+. ..+ ..+ ...+++||
T Consensus 378 ~l~RAvlEgia~~~~~~~~~l~~----g~-~~~i~~~GGga~s-~~--~~Qi~ADv~g-----~pV~~~~~~~e~~alGa 444 (511)
T 3hz6_A 378 QILLAVLEGAALSLRWCAELLGM----EK-VGLLKVVGGGARS-EA--WLRMIADNLN-----VSLLVKPDAHLHPLRGL 444 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTG----GG-CCEEEEESGGGGC-HH--HHHHHHHHHT-----CEEEECCCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----CC-CCEEEEeCchhcC-HH--HHHHHHHHHC-----CeeEEecCCCCchHHHH
Confidence 34444455555555555555542 12 5678888888755 42 4444444443 334 333 45689999
Q ss_pred HHHHHh
Q 023529 270 ALLAWN 275 (281)
Q Consensus 270 a~la~~ 275 (281)
+++|.-
T Consensus 445 A~lA~~ 450 (511)
T 3hz6_A 445 AALAAV 450 (511)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999864
No 133
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=47.63 E-value=7.3 Score=34.23 Aligned_cols=19 Identities=26% Similarity=0.316 Sum_probs=15.0
Q ss_pred CcEEEEEecCccceeeeee
Q 023529 21 REVILGLDGGTTSTVCICM 39 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~ 39 (281)
+..++|||+|.|++++++.
T Consensus 2 ~~~~igIDlGT~~s~v~~~ 20 (344)
T 1jce_A 2 LRKDIGIDLGTANTLVFLR 20 (344)
T ss_dssp --CEEEEEECSSEEEEEET
T ss_pred CCceEEEEcCcCcEEEEEC
Confidence 3468999999999998764
No 134
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=47.61 E-value=29 Score=26.42 Aligned_cols=36 Identities=8% Similarity=0.164 Sum_probs=32.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHcCCCccccceeEEccc
Q 023529 68 VGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVS 103 (281)
Q Consensus 68 ~~~~~~~~~i~~~i~~~l~~~g~~~~~i~~Igig~~ 103 (281)
...+++.+...+++++++++.++++++|.+|-+.+.
T Consensus 15 Nt~e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT~T 50 (127)
T 1dbf_A 15 DTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSAT 50 (127)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 467999999999999999999999999999988875
No 135
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=47.49 E-value=28 Score=32.54 Aligned_cols=61 Identities=15% Similarity=0.077 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHH-HHhhCCCceeeCCCCChhHHHHHHHHh
Q 023529 202 LALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKC-ILRDYPGAVPIRPKVEPAVGAALLAWN 275 (281)
Q Consensus 202 l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~-l~~~~p~~~i~~~~~~~~~GAa~la~~ 275 (281)
++..+..++..+. ++..|++.||..++ +. +...+... +.. .+.+......+.+||+++|.-
T Consensus 374 ia~~~r~~l~~~~-------~~~~i~~~GG~a~s-~~--w~Qi~ADv~~g~---pV~~~~~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 374 AALVADTALDLIG-------STGRILVEGRFAEA-DV--FVRALASLRPDC---AVYTANAHNDVSFGALRLIDP 435 (482)
T ss_dssp HHHHHHHHHHHTT-------CCSEEEEESGGGGC-HH--HHHHHHHHSTTS---EEEEESSCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhc-------CCCeEEEeCCcccC-HH--HHHHHhhhcCCC---eEEEcCCCchHHHHHHHHhCc
Confidence 5666666666665 14678898998765 42 34444443 332 223333456788999999853
No 136
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=46.54 E-value=27 Score=33.60 Aligned_cols=19 Identities=37% Similarity=0.522 Sum_probs=16.8
Q ss_pred cEEEEEecCccceeeeeee
Q 023529 22 EVILGLDGGTTSTVCICMP 40 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d 40 (281)
.+++|||+|.|++.+++++
T Consensus 2 ~~viGIDlGTT~S~Va~~~ 20 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp CCEEEEECCSSEEEEEEEE
T ss_pred CcEEEEEcCCCcEEEEEEE
Confidence 5799999999999988865
No 137
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=45.85 E-value=23 Score=33.12 Aligned_cols=19 Identities=32% Similarity=0.536 Sum_probs=16.7
Q ss_pred cEEEEEecCccceeeeeee
Q 023529 22 EVILGLDGGTTSTVCICMP 40 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d 40 (281)
..++|||+|.|++.+++.+
T Consensus 2 ~~~iGIDlGTt~s~va~~~ 20 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVLE 20 (509)
T ss_dssp CCEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEcCCceEEEEEEE
Confidence 3689999999999998876
No 138
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=45.62 E-value=62 Score=33.38 Aligned_cols=31 Identities=13% Similarity=0.105 Sum_probs=25.9
Q ss_pred cEEEEEecCc-c----ceeeeeeecccCCCCCCCCCCeEEEEecC
Q 023529 22 EVILGLDGGT-T----STVCICMPVISMSDSLPDPLPVLARAAAG 61 (281)
Q Consensus 22 ~~viGVD~Gg-T----~~~~~l~d~~~~~~~~~~~g~il~~~~~~ 61 (281)
..++|+|-|- | -++++++|. +|+++...+..
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~---------~G~~l~~~~i~ 554 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNR---------KGDFIRDYKIV 554 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECT---------TSCEEEEEEEC
T ss_pred CeEEEecCCCCCCCCCCeEEEEECC---------CCCEEEEEEEc
Confidence 4799999983 2 689999994 99999988874
No 139
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=45.24 E-value=23 Score=30.50 Aligned_cols=33 Identities=21% Similarity=0.127 Sum_probs=25.1
Q ss_pred CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecC
Q 023529 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG 61 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~ 61 (281)
|....+.||+|=|+++++++|. +++++...+..
T Consensus 21 ~~~M~L~IDiGNT~ik~g~~~~---------~~~~~~~~r~~ 53 (271)
T 2f9w_A 21 MASMILELDCGNSLIKWRVIEG---------AARSVAGGLAE 53 (271)
T ss_dssp --CEEEEEEECSSCEEEEEEET---------TTEEEEEEEES
T ss_pred ccCcEEEEEeCCCeeEEEEEeC---------CCEEEEEEEec
Confidence 5557899999999999999982 45677766654
No 140
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=43.75 E-value=24 Score=31.72 Aligned_cols=48 Identities=19% Similarity=0.086 Sum_probs=22.2
Q ss_pred ccEEEEcCcccCcchhhhHHHHHHHHHhhC-----------C---CceeeC---CCCChhHHHHHHHH
Q 023529 224 FPLVMVGGVLEANRRWDIGREVVKCILRDY-----------P---GAVPIR---PKVEPAVGAALLAW 274 (281)
Q Consensus 224 ~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~-----------p---~~~i~~---~~~~~~~GAa~la~ 274 (281)
..|+|.||-..-.. |.+.+++.+...+ | .+++.. +...+-+||..+|-
T Consensus 299 ~nIvLtGG~s~~~G---~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 299 KHIVLSGGSTMYPG---LPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp TTCEEESGGGCSTT---HHHHHHHHHHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred hCEEEeCccccccc---HHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 46999998887754 7888988887754 4 234432 23567788888773
No 141
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=43.11 E-value=37 Score=25.65 Aligned_cols=37 Identities=16% Similarity=0.242 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHcCCCc-cccceeEEcccC
Q 023529 68 VGEDAARETIEKVMADALLKSGSNR-SAVRAVCLAVSG 104 (281)
Q Consensus 68 ~~~~~~~~~i~~~i~~~l~~~g~~~-~~i~~Igig~~G 104 (281)
..++++.+...+++++++++.++++ ++|.+|-+.+.-
T Consensus 14 n~~e~I~~at~eLl~~i~~~N~l~~~~divSv~FT~T~ 51 (122)
T 1ufy_A 14 DTPEAIHQATRELLLKMLEANGIQSYEELAAVIFTVTE 51 (122)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTCCCGGGEEEEEEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCChHhEEEEEEEeCC
Confidence 4679999999999999999999999 999999888753
No 142
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=41.18 E-value=79 Score=33.23 Aligned_cols=31 Identities=13% Similarity=0.105 Sum_probs=25.9
Q ss_pred cEEEEEecCc-c----ceeeeeeecccCCCCCCCCCCeEEEEecC
Q 023529 22 EVILGLDGGT-T----STVCICMPVISMSDSLPDPLPVLARAAAG 61 (281)
Q Consensus 22 ~~viGVD~Gg-T----~~~~~l~d~~~~~~~~~~~g~il~~~~~~ 61 (281)
..++|+|-|- | -++++++|. +|+++...+..
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~---------~G~vl~~~~i~ 551 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNR---------KGDFIRDYKIV 551 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECT---------TSCEEEEEEEC
T ss_pred CeEEEecCCCCCCCCCceEEEEECC---------CCCEEEEEEEc
Confidence 4799999983 2 789999994 99999988874
No 143
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=39.83 E-value=47 Score=31.42 Aligned_cols=19 Identities=26% Similarity=0.286 Sum_probs=16.8
Q ss_pred cEEEEEecCccceeeeeee
Q 023529 22 EVILGLDGGTTSTVCICMP 40 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d 40 (281)
.+++|||+|.|++.+++++
T Consensus 4 ~~~iGIDlGTt~s~va~~~ 22 (554)
T 1yuw_A 4 GPAVGIDLGTTYSCVGVFQ 22 (554)
T ss_dssp CCCEEEEECSSEEEEEEEC
T ss_pred CCEEEEEeCcccEEEEEEE
Confidence 4689999999999988876
No 144
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=39.73 E-value=60 Score=30.48 Aligned_cols=68 Identities=13% Similarity=0.190 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCC--ceeeCC------CCChhHHHHHHH
Q 023529 202 LALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPG--AVPIRP------KVEPAVGAALLA 273 (281)
Q Consensus 202 l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~--~~i~~~------~~~~~~GAa~la 273 (281)
|.+++.+.+...+.+-- ..-=..|||+||-..... |.+++++.|...+|. +++..+ .+.+=+|+..+|
T Consensus 394 i~e~i~~sI~~cd~d~r-~~L~~nIvLsGGst~~pG---f~~Rl~~El~~l~p~~~i~v~~~~~~~er~~s~WiGgsila 469 (498)
T 3qb0_A 394 LADLVYSSIMSSDVDLR-ATLAHNVVLTGGTSSIPG---LSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILT 469 (498)
T ss_dssp HHHHHHHHHHTSCTTTH-HHHHTTEEEESGGGGSTT---HHHHHHHHHHHHSTTSCCCEECCSCTGGGGSHHHHHHHHHH
T ss_pred chHHHHHHHHhCCHHHH-HHHhcCEEEeCCccCchh---HHHHHHHHHHHhCCCCeeEEEcCCCCCccCccEEcccEEEe
Confidence 56666666665552100 000136999999988765 899999999998874 344443 234668888887
No 145
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=39.32 E-value=61 Score=29.09 Aligned_cols=48 Identities=23% Similarity=0.313 Sum_probs=33.1
Q ss_pred ccEEEEcCcccCcchhhhHHHHHHHHHhhC----------------C---CceeeCC---CCChhHHHHHHHH
Q 023529 224 FPLVMVGGVLEANRRWDIGREVVKCILRDY----------------P---GAVPIRP---KVEPAVGAALLAW 274 (281)
Q Consensus 224 ~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~----------------p---~~~i~~~---~~~~~~GAa~la~ 274 (281)
..|+|.||-..... |.+.+++.+...+ | .+++..+ ...+-+||..+|-
T Consensus 317 ~~IvL~GG~s~~pg---~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 386 (418)
T 1k8k_A 317 KNIVLSGGSTMFRD---FGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAS 386 (418)
T ss_dssp HCEEEESGGGCSTT---HHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTT
T ss_pred hceEEeCCcccccc---HHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHc
Confidence 46999999887754 7888888877653 2 2344433 3557899998873
No 146
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=38.90 E-value=40 Score=30.92 Aligned_cols=46 Identities=22% Similarity=0.252 Sum_probs=32.1
Q ss_pred cEEEEcCcccCcchhhhHHHHHHHHHhhCC-----------------CceeeCC---CCChhHHHHHHH
Q 023529 225 PLVMVGGVLEANRRWDIGREVVKCILRDYP-----------------GAVPIRP---KVEPAVGAALLA 273 (281)
Q Consensus 225 ~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p-----------------~~~i~~~---~~~~~~GAa~la 273 (281)
.|||.||-..... |.+.+++.|++.+| .+++..+ .+.+-+|+..+|
T Consensus 329 nIvLtGG~sl~~G---~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSila 394 (427)
T 3dwl_A 329 NIVLSGGSTLFKN---FGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLA 394 (427)
T ss_dssp CEEEESGGGCSTT---TTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHH
T ss_pred CEEEEccCcCCCC---hHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeec
Confidence 4999999887755 78888888877642 1344433 344678998887
No 147
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=36.28 E-value=89 Score=27.62 Aligned_cols=82 Identities=17% Similarity=0.052 Sum_probs=42.1
Q ss_pred cccchhcCCCcEEEEEecCccceeeeeeecccCCCCCCCCC--CeEEEEecCCCCCc-------cCCHHHHHHHHHHHHH
Q 023529 12 FETAEESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPL--PVLARAAAGCSNHN-------SVGEDAARETIEKVMA 82 (281)
Q Consensus 12 ~~~~~~~~~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g--~il~~~~~~~~~~~-------~~~~~~~~~~i~~~i~ 82 (281)
|.+-|.-. ...+..||+|..++|+.+++.. .+| +++.+.+.+. ... ..+ ++.+++..++++
T Consensus 7 ~~~~~~~~-~~~~A~IDiGSNsiRL~I~~~~-------~~~~~~~i~~~k~~v-rLg~g~~~~g~ls-~eai~r~~~aL~ 76 (343)
T 3cer_A 7 HHSHMSKE-SVTVAGIDCGTNSIRLKIARVD-------ADGMHEVVPRILRVI-RLGQDVDKTHRFA-DEALERAYVAAR 76 (343)
T ss_dssp -------C-CEEEEEEEECSSCEEEEEEEEE-------TTEEEEEEEEEEECC-CTTTTHHHHSSCC-HHHHHHHHHHHH
T ss_pred cccccCCC-CCeEEEEEcccceeEeEEEEEc-------CCCCEEEEEEEEEEe-eCCCCccccCCcC-HHHHHHHHHHHH
Confidence 33445444 3578999999999999999961 123 2344443332 111 122 355677777777
Q ss_pred HHHHHcCC-CccccceeEEcccCC
Q 023529 83 DALLKSGS-NRSAVRAVCLAVSGV 105 (281)
Q Consensus 83 ~~l~~~g~-~~~~i~~Igig~~G~ 105 (281)
++.+.+.. ...++.. ++++..
T Consensus 77 ~f~~~~~~~~v~~v~~--vATsA~ 98 (343)
T 3cer_A 77 EFAGVIAEHPIDGLRF--VATSAT 98 (343)
T ss_dssp HHHHHHTTSCCSEEEE--EECHHH
T ss_pred HHHHHHHHCCCCeEEE--EecHHH
Confidence 66544321 1123443 566654
No 148
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=32.47 E-value=47 Score=29.26 Aligned_cols=20 Identities=15% Similarity=0.185 Sum_probs=18.5
Q ss_pred cEEEEEecCccceeeeeeec
Q 023529 22 EVILGLDGGTTSTVCICMPV 41 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~ 41 (281)
..++.||+||.++.+.++.+
T Consensus 190 ~~vlVvDIGgGTtDv~vi~~ 209 (346)
T 2fsj_A 190 GYGVVIDVGSRTTDVLTINL 209 (346)
T ss_dssp SEEEEEEECSSCEEEEEEET
T ss_pred CcEEEEECCCCcEEEEEEEe
Confidence 57899999999999999986
No 149
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=32.47 E-value=1.3e+02 Score=26.16 Aligned_cols=74 Identities=12% Similarity=0.227 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCC-CceeeC-CCCChhHHHH
Q 023529 193 KILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYP-GAVPIR-PKVEPAVGAA 270 (281)
Q Consensus 193 ~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p-~~~i~~-~~~~~~~GAa 270 (281)
++++++.+.+...|.+-+.....+ +.....|+|.||-+. +. .+.+++.+| ++.+.. |..+.+.|+.
T Consensus 252 ~~i~~~~~e~~~~I~~~i~~~~~~---~~~~~~IvltGGGA~------l~---~~~l~~~~~~~v~v~~~P~~a~a~G~~ 319 (329)
T 4apw_A 252 TVIKKVKEKFLKDAIKLIEKRGFK---LDQLDSLIFIGGTTQ------KL---KEQISKTYPNNSIITNNSQWTTCEGLY 319 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCC---TTSCSEEEEESTTHH------HH---HHHHHHHSTTCEECCSSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC---HHHccEEEEECChHH------HH---HHHHHHHcCCCCEecCCChhhHHHHHH
Confidence 444555544444444444433211 111457888888762 22 245555555 444432 5566789998
Q ss_pred HHHHhhhh
Q 023529 271 LLAWNSFM 278 (281)
Q Consensus 271 ~la~~~~~ 278 (281)
.++.-.+.
T Consensus 320 ~~~~~k~~ 327 (329)
T 4apw_A 320 KVAVAKYC 327 (329)
T ss_dssp HHHHHHHC
T ss_pred HHHhhhhc
Confidence 88765443
No 150
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=31.84 E-value=26 Score=31.31 Aligned_cols=24 Identities=29% Similarity=0.174 Sum_probs=20.7
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEE
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLA 56 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~ 56 (281)
-.|-||+|||+|..+.+. +|+++.
T Consensus 128 ~~llvDIGsTTTDIipi~----------~G~pl~ 151 (334)
T 3cet_A 128 NCILVDMGSTTTDIIPIV----------EGKVVA 151 (334)
T ss_dssp SEEEEEECSSCEEEEEEE----------TTEECC
T ss_pred CEEEEEcCcchhhhhhhc----------CCeecc
Confidence 479999999999999988 787765
No 151
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=30.91 E-value=91 Score=28.33 Aligned_cols=39 Identities=13% Similarity=0.002 Sum_probs=28.9
Q ss_pred EEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHH
Q 023529 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETI 77 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i 77 (281)
-++-||+||.++.+.++. +|.++.....+ .+.+.+-+.|
T Consensus 207 gv~vvDiGggttdisi~~----------~g~~~~~~~i~------~GG~~it~dI 245 (419)
T 4a2a_A 207 GVVVVNLGYNFTGLIAYK----------NGVPIKISYVP------VGMKHVIKDV 245 (419)
T ss_dssp CEEEEEECSSSEEEEEEE----------TTEEEEEEEES------CCHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEE----------CCEEEEEEecc------cHHHHHHHHH
Confidence 588999999999999998 78887766543 3556654444
No 152
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=30.76 E-value=1.4e+02 Score=27.94 Aligned_cols=73 Identities=12% Similarity=0.069 Sum_probs=43.5
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCC--CeEEEEecCCC---CC---ccCCHHHHHHHHHHHHHHHHHHc-CCCc
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPL--PVLARAAAGCS---NH---NSVGEDAARETIEKVMADALLKS-GSNR 92 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g--~il~~~~~~~~---~~---~~~~~~~~~~~i~~~i~~~l~~~-g~~~ 92 (281)
..+..||+|..++|..+++. .++ +++.+.+.+.. .. ...+ ++.+++..++++.+.+.+ +...
T Consensus 11 ~~~AaIDiGSNSirL~I~~~--------~~~~~~~l~~~k~~vrLg~g~~~~g~Ls-~eai~r~~~~L~~f~~~~~~~~v 81 (513)
T 1u6z_A 11 QEFAAVDLGSNSFHMVIARV--------VDGAMQIIGRLKQRVHLADGLGPDNMLS-EEAMTRGLNCLSLFAERLQGFSP 81 (513)
T ss_dssp -CEEEEEECSSCEEEEEEEE--------ETTEEEEEEEEEECCCTGGGBCTTCCBC-HHHHHHHHHHHHHHHHHTTTCCG
T ss_pred CeEEEEEeccccEEEEEEEE--------cCCeeEEEEeeEEEEeccCcccccCCcC-HHHHHHHHHHHHHHHHHHHhCCC
Confidence 36899999999999999986 233 34444444411 10 1123 456777778888776655 2223
Q ss_pred cccceeEEcccCC
Q 023529 93 SAVRAVCLAVSGV 105 (281)
Q Consensus 93 ~~i~~Igig~~G~ 105 (281)
.++.+ ++++..
T Consensus 82 ~~v~~--vATsA~ 92 (513)
T 1u6z_A 82 ASVCI--VGTHTL 92 (513)
T ss_dssp GGEEE--EECHHH
T ss_pred CEEEE--EecHHH
Confidence 34444 466554
No 153
>2l7a_A Talin-1; vinculin, bundle, focal adhesion, integrin, cell ADHE; NMR {Mus musculus}
Probab=29.69 E-value=1.8e+02 Score=22.01 Aligned_cols=52 Identities=15% Similarity=0.138 Sum_probs=34.7
Q ss_pred ChhhHHHHhccCCChHHhhcchHHHHHHH-----HhCCHHHHHHHHHHHHHHHHHHHHHHHHc
Q 023529 156 SPDELIGWTYVDPSWARIAALVPVVVSCA-----EAGDEVANKILQDSVEELALSVKAVVQRL 213 (281)
Q Consensus 156 s~~~l~~~~~~~~~~~~~a~~a~~v~~~A-----~~GD~~A~~il~~aa~~l~~~i~~lv~~l 213 (281)
++..++.... .+++.+..|...+ ...||.-++-|-.++..|+.+++.||+.-
T Consensus 38 ~p~~Mv~~ak------~iAr~a~~Li~~~K~eAd~seDp~~~~rLl~AAk~La~At~~MVeaA 94 (131)
T 2l7a_A 38 DAGEMVRQAR------ILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEAA 94 (131)
T ss_dssp CHHHHHHHHH------HHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHH------HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666654332 3444444444433 34688888999999999999999998754
No 154
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=28.45 E-value=1.4e+02 Score=28.11 Aligned_cols=46 Identities=26% Similarity=0.337 Sum_probs=34.4
Q ss_pred cEEEEcCcccCcchhhhHHHHHHHHHhhCC--------CceeeCC------CCChhHHHHHHH
Q 023529 225 PLVMVGGVLEANRRWDIGREVVKCILRDYP--------GAVPIRP------KVEPAVGAALLA 273 (281)
Q Consensus 225 ~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p--------~~~i~~~------~~~~~~GAa~la 273 (281)
.|+|.||-..... |.+.++++|....| .++|..+ ...+=+||..+|
T Consensus 503 NIvltGG~s~~pG---f~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSila 562 (593)
T 4fo0_A 503 SILVVGGGLMFHK---AQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLA 562 (593)
T ss_dssp EEEEESSTTCCBT---HHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHH
T ss_pred CEEEEchhhchhc---HHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHh
Confidence 5888888887755 89999999988875 3556543 234668999988
No 155
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=27.76 E-value=3.3e+02 Score=24.38 Aligned_cols=73 Identities=11% Similarity=0.130 Sum_probs=44.3
Q ss_pred cEEEEEecCccc--eeeeeeecccCCCCCCCCC---CeEEEEecCCC-----------CCccCCHHH-------HHHHHH
Q 023529 22 EVILGLDGGTTS--TVCICMPVISMSDSLPDPL---PVLARAAAGCS-----------NHNSVGEDA-------ARETIE 78 (281)
Q Consensus 22 ~~viGVD~GgT~--~~~~l~d~~~~~~~~~~~g---~il~~~~~~~~-----------~~~~~~~~~-------~~~~i~ 78 (281)
.++||+=-|.+- +.+++++. +| +++.....|-+ .....+.++ +-+...
T Consensus 5 ~~~iGlMSGTSlDGiD~alv~~---------~~~~~~~~~~~~~pyp~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a 75 (370)
T 3cqy_A 5 AYYIGLMSGTSMDGVDAVLVDF---------AGEQPQLIGTHTETIPTHLLKGLQRLCLPGTDEINRLGRLDRSVGKLFA 75 (370)
T ss_dssp CEEEEEEECTTCCCEEEEEEEC---------SSSSCEEEEEEEECCCHHHHHHHHGGGCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecccchhhHeEEEEEE---------eCCeEEEEeeeeecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 378998776654 67888886 43 35555554421 110011111 123345
Q ss_pred HHHHHHHHHcCCCccccceeEEcccCC
Q 023529 79 KVMADALLKSGSNRSAVRAVCLAVSGV 105 (281)
Q Consensus 79 ~~i~~~l~~~g~~~~~i~~Igig~~G~ 105 (281)
+++++++++.++++++|.. ||..|.
T Consensus 76 ~av~~~l~~~~~~~~~i~~--IGsHGQ 100 (370)
T 3cqy_A 76 LAVNNLLAKTKIAKDEIIA--IGSHGQ 100 (370)
T ss_dssp HHHHHHHHHHCCCGGGEEE--EEEEEE
T ss_pred HHHHHHHHHcCCCcccccE--EEeCCc
Confidence 7788889999999888888 478885
No 156
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=27.15 E-value=45 Score=32.00 Aligned_cols=19 Identities=37% Similarity=0.522 Sum_probs=15.4
Q ss_pred cEEEEEecCccceeeeeee
Q 023529 22 EVILGLDGGTTSTVCICMP 40 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d 40 (281)
..++|||+|.|++.+++++
T Consensus 2 ~~viGIDlGTt~s~va~~~ 20 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp --CEEEECCSSEEEEEEEE
T ss_pred CCEEEEEcCCcCEEEEEEE
Confidence 3589999999999888875
No 157
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=26.04 E-value=56 Score=31.87 Aligned_cols=17 Identities=29% Similarity=0.389 Sum_probs=15.4
Q ss_pred EEEEecCccceeeeeee
Q 023529 24 ILGLDGGTTSTVCICMP 40 (281)
Q Consensus 24 viGVD~GgT~~~~~l~d 40 (281)
++|||+|.|++.+++++
T Consensus 4 ~iGIDlGTtns~va~~~ 20 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVAR 20 (675)
T ss_dssp CEEEECCSSEEEEEEEE
T ss_pred EEEEEcCCCcEEEEEEE
Confidence 89999999999988875
No 158
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=25.76 E-value=1.1e+02 Score=25.30 Aligned_cols=45 Identities=27% Similarity=0.485 Sum_probs=30.1
Q ss_pred CccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHHHHHH
Q 023529 223 SFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALL 272 (281)
Q Consensus 223 p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~GAa~l 272 (281)
+..|+|.||...... +.+.+++.+.. |-.....|..+.++||++.
T Consensus 227 ~~~ivL~GG~a~~~~---l~~~l~~~l~~--~v~~~~~p~~a~a~Gaal~ 271 (272)
T 3h1q_A 227 TLPVYVVGGTAYLTG---FSEEFSRFLGK--EVQVPIHPLLVTPLGIALF 271 (272)
T ss_dssp SCCEEEESGGGGSTT---HHHHHHHHHSS--CCBCCSSGGGHHHHHHHTT
T ss_pred CCEEEEECCccchhh---HHHHHHHHhCC--CccccCChHHHHHHHHHhc
Confidence 678999999987743 67777777643 2111123556688999864
No 159
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=25.36 E-value=1.1e+02 Score=26.87 Aligned_cols=69 Identities=17% Similarity=0.169 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCcee---e-CCCCChhH
Q 023529 192 NKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVP---I-RPKVEPAV 267 (281)
Q Consensus 192 ~~il~~aa~~l~~~i~~lv~~l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i---~-~~~~~~~~ 267 (281)
.+++++..+.+...+........ .....|+|.||-+. + +.+.+.+.+|.+.+ . .|..+.+.
T Consensus 272 ~~~i~~~~~~i~~~i~~~l~~~~------~~i~~IvL~GGga~------l---l~~~l~~~~~~~~i~~~~~~P~~ava~ 336 (346)
T 2fsj_A 272 GPILEDLANRIIENIRLNLRGEV------DRVTSLIPVGGGSN------L---IGDRFEEIAPGTLVKIKPEDLQFANAL 336 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGG------GGEEEEEEESTTHH------H---HGGGGGGGSTTCBCCCCTTTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh------hcccEEEEECCcHH------H---HHHHHHHHCcCcEEeccCCCcHHHHHH
Confidence 44555555555555544332110 11467999888552 2 55555555554433 2 35566789
Q ss_pred HHHHHHHh
Q 023529 268 GAALLAWN 275 (281)
Q Consensus 268 GAa~la~~ 275 (281)
|+..++..
T Consensus 337 G~~~~~~~ 344 (346)
T 2fsj_A 337 GYRDAAER 344 (346)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhh
Confidence 98876543
No 160
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=25.19 E-value=50 Score=29.33 Aligned_cols=78 Identities=9% Similarity=-0.076 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-cccCCCCCCCCccEEEEcCcccCcchhhhHHHHHHHHHhhCCCceeeCCCCChhHH
Q 023529 190 VANKILQDSVEELALSVKAVVQR-LSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVG 268 (281)
Q Consensus 190 ~A~~il~~aa~~l~~~i~~lv~~-l~~~~~~~~~p~~IvLgGgv~~~~~~~~l~~~i~~~l~~~~p~~~i~~~~~~~~~G 268 (281)
...++++++.+.+...|..-+.. +.. +.....|+|.||-+.- +.+.+.+.+++.+|.. ..|..+.+.|
T Consensus 261 di~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l-----~~~~l~~~i~~~~~~~--~~p~~anA~G 329 (355)
T 3js6_A 261 DFKDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANI-----HFDSLSHYYSDVFEKA--DDSQFSNVRG 329 (355)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHH-----HHHHHHHHSSSCEECC--SSGGGHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhc-----chhhHHHHHHHHCCCC--CCcHHHHHHH
Confidence 34455666665555555444433 320 1234578888876632 3345677777666554 3456667899
Q ss_pred HHHHHHhhhh
Q 023529 269 AALLAWNSFM 278 (281)
Q Consensus 269 Aa~la~~~~~ 278 (281)
...++.....
T Consensus 330 ~~~~~~~~~~ 339 (355)
T 3js6_A 330 YEKLGELLKN 339 (355)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9888865543
No 161
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=25.03 E-value=82 Score=27.10 Aligned_cols=20 Identities=20% Similarity=0.071 Sum_probs=18.0
Q ss_pred CcEEEEEecCccceeeeeee
Q 023529 21 REVILGLDGGTTSTVCICMP 40 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d 40 (281)
...++.||+||.++.+.++.
T Consensus 163 ~~~~~vvDiGggttd~~v~~ 182 (320)
T 2zgy_A 163 LDSLLIIDLGGTTLDISQVM 182 (320)
T ss_dssp TCEEEEEEECSSCEEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEEEe
Confidence 35789999999999999998
No 162
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=24.58 E-value=1.6e+02 Score=26.52 Aligned_cols=70 Identities=11% Similarity=-0.053 Sum_probs=44.4
Q ss_pred CccccCcccccccchhcC--CCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHH
Q 023529 2 KRYRNGEIWDFETAEESG--GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEK 79 (281)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~ 79 (281)
|++++|--|.|++.++.- ....+--.|-.|..+-.+.+|. ..++..+.-... +. ..+.+-..++|.+
T Consensus 16 ~~~~~g~pwi~~~~i~~~~~~G~~v~v~~~~g~~lg~g~~~~---------~s~i~~r~l~~~-~~-~~d~~~~~~rl~~ 84 (393)
T 4dmg_A 16 RKLRNFYPNLYRDEIAAPPEGVGVAEAVDAEGHFLAVGYYDP---------RSRVPFRAFRFD-PG-PLNRAFFQGRFAR 84 (393)
T ss_dssp HHHHTTCCEECGGGEEECCSSSEEEEEECTTCCEEEEEEECT---------TSSSSEEEEESS-SC-CCCHHHHHHHHHH
T ss_pred HHHhcCCCEEEHHHhcCcCCCCCEEEEEcCCCCEEEEEEECC---------CCceEEEEeeCC-CC-CCCHHHHHHHHHH
Confidence 468899999999987542 2346667788888998889985 445544443221 11 2454445555555
Q ss_pred HHH
Q 023529 80 VMA 82 (281)
Q Consensus 80 ~i~ 82 (281)
+++
T Consensus 85 a~~ 87 (393)
T 4dmg_A 85 ALR 87 (393)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 163
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=23.84 E-value=3.2e+02 Score=24.63 Aligned_cols=30 Identities=20% Similarity=0.162 Sum_probs=23.5
Q ss_pred cEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEe
Q 023529 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAA 59 (281)
Q Consensus 22 ~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~ 59 (281)
..++.+..|.+++++.|+|. ++++++.+..
T Consensus 2 ~~iLviN~GSSSlK~~l~~~--------~~~~~l~~G~ 31 (384)
T 3khy_A 2 SEILVLNCGSSSVKFALINP--------HTSQSLVTGL 31 (384)
T ss_dssp CEEEEEEECSSCEEEEEEET--------TTTEEEEEEE
T ss_pred CEEEEEECCchhheEEEEec--------CCCceEEEEE
Confidence 37899999999999999996 3555665543
No 164
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=22.45 E-value=2.2e+02 Score=25.17 Aligned_cols=93 Identities=6% Similarity=-0.125 Sum_probs=52.1
Q ss_pred CccccCcccccccchhc--CCCcEEEEEecCccceeeeeeecccCCCCCCCCCCeEEEEecCCCCCccCCHHHHHHHHHH
Q 023529 2 KRYRNGEIWDFETAEES--GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEK 79 (281)
Q Consensus 2 ~~~~~~~~~~~~~~~~~--~~~~~viGVD~GgT~~~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~ 79 (281)
++.++|..|.|.+.+.. .-...+-..|-.|..+..+.++. .-.+..+.-.-. .. ..+.+-..+.+.+
T Consensus 12 ~~~~~~~pw~y~n~~~~~~~~g~~v~v~~~~g~~l~~g~~~~---------~s~i~~ri~~~~-~~-~i~~~~~~~~~~~ 80 (385)
T 2b78_A 12 KKLKRGVQLLSSRDYPNLNLDNQVVQLYSDADIFLGTAYLSK---------QNKGVGWLISPK-KV-SLNVTYFIKLFQW 80 (385)
T ss_dssp HHHHHTCCEEEGGGSTTCCCCSEEEEEECTTCCEEEEEEEEE---------ETTEEEEEEESS-CC-CCCHHHHHHHHHH
T ss_pred HHHhcCCCeEEHHHhCCCCCCCCEEEEEcCCCCEEEEEEECC---------CCCEEEEEEECC-CC-CCCHHHHHHHHHH
Confidence 46788999999999876 54444555576777788888884 223333322111 11 1354545466666
Q ss_pred HH---HHHHHHcCCCccccc-eeEEcccCC
Q 023529 80 VM---ADALLKSGSNRSAVR-AVCLAVSGV 105 (281)
Q Consensus 80 ~i---~~~l~~~g~~~~~i~-~Igig~~G~ 105 (281)
++ ++++.+.+.+..++. +=|-++||.
T Consensus 81 a~~~r~~~~~~~~~~~yr~~~~egd~l~gl 110 (385)
T 2b78_A 81 SKDKRKNFAHSKLTTAYRLFNQDGDSFGGV 110 (385)
T ss_dssp HHHTTHHHHHCSSCCEEEEEEGGGGTCTTE
T ss_pred HHHHHHHHhcCCCCceEEEEeCCCCCCCce
Confidence 66 666654444433322 112245654
No 165
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=22.05 E-value=49 Score=30.72 Aligned_cols=22 Identities=18% Similarity=0.157 Sum_probs=19.6
Q ss_pred CCcEEEEEecCccceeeeeeec
Q 023529 20 GREVILGLDGGTTSTVCICMPV 41 (281)
Q Consensus 20 ~~~~viGVD~GgT~~~~~l~d~ 41 (281)
...|.+.||+|.|.+|+.+++.
T Consensus 32 ~~~y~~vID~GSns~Rl~Vy~~ 53 (456)
T 3cj1_A 32 ALKYGIVLDAGSSHTSMFVYKW 53 (456)
T ss_dssp CEEEEEEEEECSSCEEEEEEEE
T ss_pred CceEEEEEEcCCCCeEEEEEEE
Confidence 3469999999999999999985
No 166
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=20.58 E-value=49 Score=29.74 Aligned_cols=19 Identities=21% Similarity=0.223 Sum_probs=16.5
Q ss_pred EEEEEecCccceeeeeeec
Q 023529 23 VILGLDGGTTSTVCICMPV 41 (281)
Q Consensus 23 ~viGVD~GgT~~~~~l~d~ 41 (281)
-.+|||+|||-++.+-+..
T Consensus 4 ~~~~iDiGGtL~Klvy~~~ 22 (360)
T 2i7n_A 4 PWFGMDIGGTLVKLVYFEP 22 (360)
T ss_dssp CEEEEEECSSEEEEEEEEE
T ss_pred CEEEEEeCCceEEEEEEee
Confidence 3789999999999998764
No 167
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=20.34 E-value=63 Score=28.81 Aligned_cols=21 Identities=19% Similarity=0.210 Sum_probs=18.8
Q ss_pred CcEEEEEecCccceeeeeeec
Q 023529 21 REVILGLDGGTTSTVCICMPV 41 (281)
Q Consensus 21 ~~~viGVD~GgT~~~~~l~d~ 41 (281)
..+++.||+|.+.+|+.+++.
T Consensus 2 ~~~~avID~GSns~Rl~I~~~ 22 (353)
T 3aap_A 2 HSCIAVIDAGSTGSRLHIYSY 22 (353)
T ss_dssp CEEEEEEEECSSCEEEEEEEE
T ss_pred CCEEEEEEcCCCCeEEEEEEE
Confidence 358999999999999999985
Done!