BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 023530
         (281 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O34990|PURU_BACSU Formyltetrahydrofolate deformylase OS=Bacillus subtilis (strain
           168) GN=purU PE=3 SV=2
          Length = 300

 Score = 92.0 bits (227), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)

Query: 49  CPDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFF 107
           CPD+ GIV+ +S  +   G NI+ ++ +  + +   F+ R EF    I+  +  +   F 
Sbjct: 26  CPDQPGIVSAVSAFLFEHGANIIESNQYTTDPEGGRFFLRIEFDCAGIREKKSSLQAAFA 85

Query: 108 KLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDR 167
            +++ F+   S+    ++    +VA+  SK+ HCL + ++ WQ G L  EI  VISNH+ 
Sbjct: 86  SVAEKFDMTWSLTLASELK---RVAIFVSKELHCLHELIWEWQTGNLMAEIAVVISNHEE 142

Query: 168 GPNSHVIRFLERHGIPYHYLCAKEN---EREEELLELVQ--NTDFLVLARYMQ 215
                    +ER  IP+HY+ A ++   E E++ LEL++  + D +VLARYMQ
Sbjct: 143 AR-----ELVERLNIPFHYMKANKDIRAEVEKKQLELLEQYDVDVIVLARYMQ 190


>sp|Q55135|PURU_SYNY3 Formyltetrahydrofolate deformylase OS=Synechocystis sp. (strain PCC
           6803 / Kazusa) GN=purU PE=3 SV=1
          Length = 284

 Score = 89.0 bits (219), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 13/172 (7%)

Query: 49  CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
           CPD+ GIVA++++ I    GNI+ AD        +F +R E+  D  +  R ++   + +
Sbjct: 12  CPDQPGIVAQIAQFIYQNQGNIIHADQHTDFSSGLFLNRVEWQLDNFRLSRPELLSAWSQ 71

Query: 109 LSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG 168
           L++   A   +    D  P+  +A+  SKQ+HCL+D L+ W+ G+L  EI  +ISNH   
Sbjct: 72  LAEQLQATWQI-HFSDQLPR--LALWVSKQDHCLLDILWRWRSGELRCEIPLIISNH--- 125

Query: 169 PNSHVIRFLERHGIPYHYL-CAKENEREEELLELV----QNTDFLVLARYMQ 215
           P+   I   ++ GI +H L   KEN+  +E  EL        D +VLA+Y+Q
Sbjct: 126 PDLKSIA--DQFGIDFHCLPITKENKLAQETAELALLKQYQIDLVVLAKYLQ 175


>sp|P0A5T6|PURU_MYCTU Formyltetrahydrofolate deformylase OS=Mycobacterium tuberculosis
           GN=purU PE=3 SV=1
          Length = 310

 Score = 75.1 bits (183), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 18/178 (10%)

Query: 46  VFHCPDEVGIVAKLSECIASRGGNILAAD--VFVPEKKNVFYSRSEFIFDPIKWPREQMD 103
           +  C D  GI+A +S  +A  G NI++ D     PE    F  R+ F    +    +++ 
Sbjct: 34  LLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEG-GTFLQRAIFHLPGLTAAVDELQ 92

Query: 104 EDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
            DF   S + +      R  +     +VA++AS ++HCL+D L+  + G+L + +  VI+
Sbjct: 93  RDFG--STVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIA 150

Query: 164 NHDRGPN--SHVIRFLERHGIPYHYLCAKENEREE----ELLELVQNTDFLVLARYMQ 215
           NH   P+  +HV  F    G+P+ ++ A  + R E    +L  L  N D +VLARYMQ
Sbjct: 151 NH---PDLAAHVRPF----GVPFIHIPATRDTRTEAEQRQLQLLSGNVDLVVLARYMQ 201


>sp|P0A5T7|PURU_MYCBO Formyltetrahydrofolate deformylase OS=Mycobacterium bovis (strain
           ATCC BAA-935 / AF2122/97) GN=purU PE=3 SV=1
          Length = 310

 Score = 75.1 bits (183), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 18/178 (10%)

Query: 46  VFHCPDEVGIVAKLSECIASRGGNILAAD--VFVPEKKNVFYSRSEFIFDPIKWPREQMD 103
           +  C D  GI+A +S  +A  G NI++ D     PE    F  R+ F    +    +++ 
Sbjct: 34  LLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEG-GTFLQRAIFHLPGLTAAVDELQ 92

Query: 104 EDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
            DF   S + +      R  +     +VA++AS ++HCL+D L+  + G+L + +  VI+
Sbjct: 93  RDFG--STVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIA 150

Query: 164 NHDRGPN--SHVIRFLERHGIPYHYLCAKENEREE----ELLELVQNTDFLVLARYMQ 215
           NH   P+  +HV  F    G+P+ ++ A  + R E    +L  L  N D +VLARYMQ
Sbjct: 151 NH---PDLAAHVRPF----GVPFIHIPATRDTRTEAEQRQLQLLSGNVDLVVLARYMQ 201


>sp|P37051|PURU_ECOLI Formyltetrahydrofolate deformylase OS=Escherichia coli (strain K12)
           GN=purU PE=1 SV=1
          Length = 280

 Score = 68.6 bits (166), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 28/177 (15%)

Query: 49  CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
           CPD+ G++A+++        NI+  + FV  +   F+ R+E              E  F 
Sbjct: 13  CPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTEL-------------EGIFN 59

Query: 109 LSKMFNAMRSVV---RVPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
            S +   + S +    V +++P  + ++ +L +K+ HCL D L     G L VEI  VI 
Sbjct: 60  DSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIG 119

Query: 164 NHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLVLARYMQ 215
           NHD      +   +ER  IP+  +  +    NE ++++ + +     D++VLA+YM+
Sbjct: 120 NHDT-----LRSLVERFDIPFELVSHEGLTRNEHDQKMADAIDAYQPDYVVLAKYMR 171


>sp|P0A441|PURU_SHIFL Formyltetrahydrofolate deformylase OS=Shigella flexneri GN=purU
           PE=3 SV=1
          Length = 280

 Score = 68.6 bits (166), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 28/177 (15%)

Query: 49  CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
           CPD+ G++A+++        NI+  + FV  +   F+ R+E              E  F 
Sbjct: 13  CPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTEL-------------EGIFN 59

Query: 109 LSKMFNAMRSVV---RVPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
            S +   + S +    V +++P  + ++ +L +K+ HCL D L     G L VEI  VI 
Sbjct: 60  DSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIG 119

Query: 164 NHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLVLARYMQ 215
           NHD      +   +ER  IP+  +  +    NE ++++ + +     D++VLA+YM+
Sbjct: 120 NHDT-----LRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQPDYVVLAKYMR 171


>sp|P0A440|PURU_ECOL6 Formyltetrahydrofolate deformylase OS=Escherichia coli O6:H1
           (strain CFT073 / ATCC 700928 / UPEC) GN=purU PE=3 SV=1
          Length = 280

 Score = 68.6 bits (166), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 28/177 (15%)

Query: 49  CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
           CPD+ G++A+++        NI+  + FV  +   F+ R+E              E  F 
Sbjct: 13  CPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTEL-------------EGIFN 59

Query: 109 LSKMFNAMRSVV---RVPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
            S +   + S +    V +++P  + ++ +L +K+ HCL D L     G L VEI  VI 
Sbjct: 60  DSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIG 119

Query: 164 NHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLVLARYMQ 215
           NHD      +   +ER  IP+  +  +    NE ++++ + +     D++VLA+YM+
Sbjct: 120 NHDT-----LRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQPDYVVLAKYMR 171


>sp|Q46339|PURU_CORS1 Formyltetrahydrofolate deformylase OS=Corynebacterium sp. (strain
           P-1) GN=purU PE=3 SV=1
          Length = 286

 Score = 67.4 bits (163), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 13/174 (7%)

Query: 47  FHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDF 106
             CP+ +GIV  ++  +      I+    +        + R +F  D      + +  +F
Sbjct: 11  LQCPEGIGIVHAVTGFLVRHQRTIVELKQYDDMSAGRLFLRVDFAGDSAPDLLDALRSEF 70

Query: 107 FKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHD 166
            +++  F+ M   +R  +   K KV ++ SK EHCL D L+    G LP+E+  V SNH 
Sbjct: 71  SEVAAKFD-MDWQLR--ERGQKTKVLIMVSKFEHCLQDLLFRMHSGDLPIEVVGVASNH- 126

Query: 167 RGPNSHVIRFLERHGIPYHYLCAKENER---EEELLELVQNT--DFLVLARYMQ 215
             P+   +  +E +GI +H++   ++ +   E  LLEL+  T  + +VLARYMQ
Sbjct: 127 --PDHRSL--VEWYGIGFHHIPISKDTKPRAEAALLELIDQTGAELVVLARYMQ 176


>sp|Q03432|PURU_HAEIN Formyltetrahydrofolate deformylase OS=Haemophilus influenzae
           (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=purU PE=3
           SV=2
          Length = 278

 Score = 64.3 bits (155), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 26/176 (14%)

Query: 49  CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEF--IFDPIKWPREQMDEDF 106
           CPD+ G++AK++        NIL  + FV  +   F+ R+E   IF+        + ED 
Sbjct: 11  CPDDKGLIAKITNICYKHQLNILHNNEFVDFETKHFFMRTELEGIFN-----EATLLEDL 65

Query: 107 -FKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNH 165
            + L +  N      R+     K ++ +L +K+ HCL D L     G L VEI  VI NH
Sbjct: 66  KYSLPEETNC-----RLIGTQRK-RIVILVTKEAHCLGDILMKNYYGALDVEIAAVIGNH 119

Query: 166 DRGPNSHVIRFLERHGIPYHYLCAKEN----EREEELLELVQ--NTDFLVLARYMQ 215
           D     ++   +ER  IP+H L + EN    E ++ L E +     D++VLA+YM+
Sbjct: 120 D-----NLRELVERFNIPFH-LVSHENLTRVEHDKLLAEKIDEYTPDYIVLAKYMR 169


>sp|Q7NV65|HEMH_CHRVO Ferrochelatase OS=Chromobacterium violaceum (strain ATCC 12472 /
           DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC
           9757) GN=hemH PE=3 SV=1
          Length = 364

 Score = 37.0 bits (84), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 19/102 (18%)

Query: 102 MDEDFFKLSKMFN--AMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEIT 159
           +DE F  LS++ N   +R+V    D DP Y  A+ A  ++H        WQ G+ P ++ 
Sbjct: 159 LDEAFRVLSRLRNMPEVRTVRHFHD-DPGYIAALAAQIRKH--------WQYGQRPDKL- 208

Query: 160 CVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201
            V+S H       V RF    G PYH  C K      E L+L
Sbjct: 209 -VMSFHG------VPRFTRDKGDPYHCECQKTGRLLAEALQL 243


>sp|Q24MT3|SECA_DESHY Protein translocase subunit SecA OS=Desulfitobacterium hafniense
           (strain Y51) GN=secA PE=3 SV=2
          Length = 834

 Score = 35.4 bits (80), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 11/69 (15%)

Query: 142 LVDFLYGWQEGKLPVEITCVISNHDRG-----------PNSHVIRFLERHGIPYHYLCAK 190
           L D +Y  +EGK    +  +I  H +G            +  +   LER GIP+  L AK
Sbjct: 402 LPDVVYRTEEGKFKAVVEEIIERHKKGQPVLVGTVSVEKSERLSSMLERRGIPHQVLNAK 461

Query: 191 ENEREEELL 199
            +E+E E++
Sbjct: 462 FHEKEAEII 470


>sp|Q5WDF8|SECA_BACSK Protein translocase subunit SecA OS=Bacillus clausii (strain
           KSM-K16) GN=secA PE=3 SV=1
          Length = 841

 Score = 33.9 bits (76), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 11/82 (13%)

Query: 144 DFLYGWQEGKLPVEITCVISNHDRG----------PNSHVI-RFLERHGIPYHYLCAKEN 192
           D +Y   +GK    +  +   H  G            S V+ + L R  IP+H L AK +
Sbjct: 406 DLIYKTMQGKFNAVVNEIAELHKTGRPVLVGTVNVETSEVVSKMLTRKRIPHHVLNAKNH 465

Query: 193 EREEELLELVQNTDFLVLARYM 214
           ERE E++E   +   + +A  M
Sbjct: 466 EREAEIIEKAGHKGAVTIATNM 487


>sp|A3DF88|SECA_CLOTH Protein translocase subunit SecA OS=Clostridium thermocellum
           (strain ATCC 27405 / DSM 1237) GN=secA PE=3 SV=1
          Length = 910

 Score = 32.7 bits (73), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 11/82 (13%)

Query: 144 DFLYGWQEGKLPVEITCVISNHDRG-----------PNSHVIRFLERHGIPYHYLCAKEN 192
           D +Y  + GK    I  VI  H +G            +  +   L+RHGIP+  L AK +
Sbjct: 421 DSVYKNERGKFNAVINQVIECHKKGQPVLIGTISIEKSELLSSMLKRHGIPHQVLNAKYH 480

Query: 193 EREEELLELVQNTDFLVLARYM 214
           E+E E++        + +A  M
Sbjct: 481 EKEAEIIAQAGKLGAVTIATNM 502


>sp|Q8VHU4|ELP1_RAT Elongator complex protein 1 OS=Rattus norvegicus GN=Ikbkap PE=2
           SV=1
          Length = 1331

 Score = 32.7 bits (73), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 3/88 (3%)

Query: 161 VISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQ 220
           + S  D+ PN   + F E++G+ + Y      + E ++ +L+ N D  VLA +++ +P  
Sbjct: 253 IASTQDK-PNQQDVVFFEKNGLLHGYFTLPFLKDEVKVNDLLWNADSSVLAVWLEDLP-- 309

Query: 221 KEAYLGYKLLESLSSKGSLTSYFNMHMP 248
           KE     K    L + G+   Y    +P
Sbjct: 310 KEGSSTLKSYVQLWTVGNYHWYLKQSLP 337


>sp|B0TGY6|SECA_HELMI Protein translocase subunit SecA OS=Heliobacterium modesticaldum
           (strain ATCC 51547 / Ice1) GN=secA PE=3 SV=1
          Length = 843

 Score = 32.7 bits (73), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/129 (20%), Positives = 55/129 (42%), Gaps = 18/129 (13%)

Query: 104 EDFFKLSKMFNAMRSVVRV--PDIDPKYKVAVLA-----SKQEHCLVDFLYGWQEGKLPV 156
           +++F++    + M    +   P+    YK+ V+        Q   L D +Y  +EGK   
Sbjct: 356 QNYFRMYDKLSGMTGTAKTEEPEFMQIYKMDVVQIPTNKPMQRKDLPDVVYRTEEGKFNA 415

Query: 157 EITCVISNHDRG-----------PNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205
            +  ++ +  RG            +  +   L+R G+P+  L AK +E+E E+++     
Sbjct: 416 VVEEIVQSFRRGQPVLVGTVSIEKSEQLSDKLKRRGVPHQVLNAKHHEKEAEIVKNAGQR 475

Query: 206 DFLVLARYM 214
             + +A  M
Sbjct: 476 GMVTIATNM 484


>sp|A7H8W2|TTCA_ANADF tRNA 2-thiocytidine biosynthesis protein TtcA OS=Anaeromyxobacter
           sp. (strain Fw109-5) GN=ttcA PE=3 SV=1
          Length = 303

 Score = 32.0 bits (71), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 11/94 (11%)

Query: 105 DFFKLSKMF-----NAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEIT 159
           D  KL K       NA+R    + D D +  VAV   K  + L+  L   +E + P++  
Sbjct: 16  DVSKLEKRLLRAAANAIRDFELIGDGD-RIMVAVSGGKDSYTLLHVLMRLRE-RAPIDFD 73

Query: 160 CVISNHDRGPNSHVIRFLERH----GIPYHYLCA 189
            V  N D+G   +    +ERH    G+P+  L A
Sbjct: 74  LVAVNLDQGQPGYPAEIVERHFQAVGVPHRMLYA 107


>sp|Q1AVJ6|SECA_RUBXD Protein translocase subunit SecA OS=Rubrobacter xylanophilus
           (strain DSM 9941 / NBRC 16129) GN=secA PE=3 SV=1
          Length = 902

 Score = 31.6 bits (70), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 11/67 (16%)

Query: 144 DFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLCAKEN 192
           D +Y  ++ K    I  ++  H +G            + H+   L+R GI ++ L AK +
Sbjct: 405 DLVYRTKKAKYAAVIDDIVERHRKGQPVLVGTVSVEVSEHLSALLKRRGIKHNVLNAKHH 464

Query: 193 EREEELL 199
           ERE E++
Sbjct: 465 EREAEII 471


>sp|Q03281|HEH2_YEAST Inner nuclear membrane protein HEH2 OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=HEH2 PE=1 SV=1
          Length = 663

 Score = 31.2 bits (69), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 6/74 (8%)

Query: 176 FLERHGI-PYHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLS 234
            LE +GI P+   CAK+  +E+E+ ELV   +      Y++    Q E   G  L ES  
Sbjct: 408 ILETYGIIPFPKYCAKDESKEKEVDELVWKVN-----EYLKKKNAQHECGEGENLFESGE 462

Query: 235 SKGSLTSYFNMHMP 248
           ++  L   F+   P
Sbjct: 463 TETKLYDIFSHSRP 476


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.138    0.419 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,520,225
Number of Sequences: 539616
Number of extensions: 4182419
Number of successful extensions: 10053
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 10029
Number of HSP's gapped (non-prelim): 24
length of query: 281
length of database: 191,569,459
effective HSP length: 116
effective length of query: 165
effective length of database: 128,974,003
effective search space: 21280710495
effective search space used: 21280710495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)