Query 023530
Match_columns 281
No_of_seqs 286 out of 2383
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 08:23:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023530.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023530hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o1l_A Formyltetrahydrofolate 100.0 1.7E-54 5.8E-59 403.5 25.1 208 41-260 21-238 (302)
2 3lou_A Formyltetrahydrofolate 100.0 1.5E-53 5.3E-58 395.5 26.4 213 36-260 4-228 (292)
3 3n0v_A Formyltetrahydrofolate 100.0 3E-53 1E-57 392.5 27.5 211 37-260 3-223 (286)
4 3obi_A Formyltetrahydrofolate 100.0 1.8E-53 6.1E-58 394.4 22.7 209 41-260 5-223 (288)
5 3nrb_A Formyltetrahydrofolate 100.0 1E-53 3.5E-58 395.8 20.8 208 40-260 5-222 (287)
6 3p9x_A Phosphoribosylglycinami 100.0 7.9E-32 2.7E-36 239.3 15.1 126 128-260 2-138 (211)
7 3tqr_A Phosphoribosylglycinami 100.0 5.4E-31 1.8E-35 234.6 15.9 127 126-260 3-140 (215)
8 4ds3_A Phosphoribosylglycinami 100.0 8.7E-31 3E-35 232.3 15.9 126 128-260 7-143 (209)
9 3kcq_A Phosphoribosylglycinami 100.0 8.8E-31 3E-35 233.2 15.6 127 126-260 6-139 (215)
10 3da8_A Probable 5'-phosphoribo 100.0 4.8E-30 1.6E-34 228.5 16.3 127 125-260 9-146 (215)
11 1meo_A Phosophoribosylglycinam 100.0 1.8E-29 6.3E-34 223.7 15.0 126 129-261 1-137 (209)
12 1jkx_A GART;, phosphoribosylgl 100.0 1.9E-29 6.5E-34 224.0 14.7 125 129-260 1-136 (212)
13 3av3_A Phosphoribosylglycinami 100.0 5.7E-29 2E-33 220.8 15.8 127 127-260 2-139 (212)
14 3auf_A Glycinamide ribonucleot 100.0 7.7E-29 2.6E-33 222.5 14.9 132 122-260 16-158 (229)
15 2ywr_A Phosphoribosylglycinami 100.0 3E-28 1E-32 216.7 14.6 126 128-260 1-137 (216)
16 1fmt_A Methionyl-tRNA FMet for 99.9 3.8E-23 1.3E-27 193.2 13.4 121 127-261 2-137 (314)
17 2bln_A Protein YFBG; transfera 99.9 4.4E-23 1.5E-27 192.0 11.1 119 129-261 1-131 (305)
18 3q0i_A Methionyl-tRNA formyltr 99.9 5.2E-22 1.8E-26 185.9 11.9 120 128-261 7-141 (318)
19 1z7e_A Protein aRNA; rossmann 99.9 4.6E-22 1.6E-26 200.2 11.8 119 129-261 1-131 (660)
20 3rfo_A Methionyl-tRNA formyltr 99.9 1.3E-21 4.3E-26 183.2 13.4 123 125-261 1-138 (317)
21 3tqq_A Methionyl-tRNA formyltr 99.9 2.3E-21 7.8E-26 181.2 13.6 120 128-261 2-136 (314)
22 2bw0_A 10-FTHFDH, 10-formyltet 99.9 1.6E-21 5.5E-26 183.3 11.1 122 128-260 22-156 (329)
23 3p96_A Phosphoserine phosphata 99.7 4.3E-17 1.5E-21 155.3 15.5 160 40-213 10-179 (415)
24 1zpv_A ACT domain protein; str 99.6 9.1E-15 3.1E-19 111.1 11.6 76 40-118 3-78 (91)
25 2nyi_A Unknown protein; protei 99.6 5.8E-15 2E-19 128.4 8.4 80 37-118 88-171 (195)
26 1u8s_A Glycine cleavage system 99.5 3E-13 1E-17 116.7 11.2 81 37-118 88-174 (192)
27 1u8s_A Glycine cleavage system 99.4 1.4E-12 4.7E-17 112.5 14.3 120 41-164 5-129 (192)
28 2nyi_A Unknown protein; protei 99.4 4.5E-13 1.6E-17 116.4 10.1 93 39-138 2-101 (195)
29 1zgh_A Methionyl-tRNA formyltr 99.2 2.3E-12 7.7E-17 117.5 2.1 58 198-261 69-131 (260)
30 2ko1_A CTR148A, GTP pyrophosph 98.4 2.7E-07 9.3E-12 68.5 5.9 64 41-110 4-67 (88)
31 3p96_A Phosphoserine phosphata 98.1 2.4E-05 8.2E-10 74.0 12.6 93 38-134 97-190 (415)
32 2f1f_A Acetolactate synthase i 97.7 6.7E-05 2.3E-09 63.7 6.6 68 41-110 2-69 (164)
33 2pc6_A Probable acetolactate s 97.4 0.00025 8.4E-09 60.3 6.4 68 41-110 3-70 (165)
34 2fgc_A Acetolactate synthase, 97.4 0.00044 1.5E-08 60.2 8.1 70 40-111 27-96 (193)
35 1y7p_A Hypothetical protein AF 97.4 0.0002 7E-09 63.4 5.9 90 41-138 3-97 (223)
36 2f06_A Conserved hypothetical 97.3 0.01 3.5E-07 47.9 15.2 62 39-108 3-64 (144)
37 2re1_A Aspartokinase, alpha an 97.2 0.001 3.4E-08 55.7 8.0 93 36-137 19-112 (167)
38 2dt9_A Aspartokinase; protein- 96.9 0.011 3.7E-07 49.3 11.6 89 40-137 14-104 (167)
39 2jhe_A Transcription regulator 96.8 0.0021 7E-08 52.7 6.1 34 44-77 2-35 (190)
40 1ygy_A PGDH, D-3-phosphoglycer 96.3 0.013 4.5E-07 57.7 9.1 65 41-109 453-517 (529)
41 1sc6_A PGDH, D-3-phosphoglycer 96.2 0.021 7.1E-07 54.6 9.7 76 11-93 303-380 (404)
42 4go7_X Aspartokinase; transfer 96.1 0.009 3.1E-07 52.0 6.2 98 34-138 27-125 (200)
43 2f06_A Conserved hypothetical 96.0 0.022 7.5E-07 45.9 7.8 33 44-76 74-106 (144)
44 3s1t_A Aspartokinase; ACT doma 95.2 0.15 5E-06 43.2 10.2 90 41-138 15-106 (181)
45 2dtj_A Aspartokinase; protein- 94.9 0.21 7.1E-06 41.9 10.3 107 41-155 14-125 (178)
46 4gmf_A Yersiniabactin biosynth 94.6 0.022 7.7E-07 53.6 4.0 55 124-185 3-57 (372)
47 3rjz_A N-type ATP pyrophosphat 94.1 0.14 4.8E-06 45.5 7.8 105 128-239 4-126 (237)
48 3mtj_A Homoserine dehydrogenas 93.4 0.19 6.5E-06 48.6 8.0 71 37-111 354-425 (444)
49 2re1_A Aspartokinase, alpha an 93.3 0.23 7.7E-06 41.2 7.3 62 41-115 102-166 (167)
50 4had_A Probable oxidoreductase 92.6 0.29 9.9E-06 44.5 7.6 69 125-211 20-93 (350)
51 3ab4_A Aspartokinase; aspartat 91.8 0.95 3.2E-05 43.0 10.3 88 43-138 265-354 (421)
52 2dtj_A Aspartokinase; protein- 91.6 0.25 8.4E-06 41.5 5.5 63 41-116 94-159 (178)
53 3k5p_A D-3-phosphoglycerate de 91.5 0.47 1.6E-05 45.5 7.9 64 11-78 314-379 (416)
54 2dt9_A Aspartokinase; protein- 91.2 0.73 2.5E-05 37.9 7.9 63 41-116 94-159 (167)
55 4fb5_A Probable oxidoreductase 90.8 0.57 1.9E-05 42.6 7.5 70 127-211 24-101 (393)
56 3l76_A Aspartokinase; alloster 90.6 0.32 1.1E-05 48.7 5.9 93 40-138 442-537 (600)
57 2qmw_A PDT, prephenate dehydra 90.4 0.99 3.4E-05 40.7 8.6 65 41-111 187-255 (267)
58 3a06_A 1-deoxy-D-xylulose 5-ph 89.9 0.82 2.8E-05 43.3 7.7 76 129-211 4-92 (376)
59 4go7_X Aspartokinase; transfer 89.3 0.64 2.2E-05 40.2 6.1 63 41-116 114-179 (200)
60 3mwb_A Prephenate dehydratase; 89.2 1.5 5E-05 40.5 8.8 67 40-111 199-269 (313)
61 3l76_A Aspartokinase; alloster 88.9 9.3 0.00032 38.0 15.1 129 43-182 271-418 (600)
62 2qmx_A Prephenate dehydratase; 88.8 1.2 4.2E-05 40.4 7.9 64 41-111 201-267 (283)
63 1nvm_B Acetaldehyde dehydrogen 88.5 1.3 4.3E-05 40.6 7.9 73 127-211 3-78 (312)
64 4gqa_A NAD binding oxidoreduct 88.4 1.1 3.8E-05 41.7 7.6 74 125-211 23-103 (412)
65 3ohs_X Trans-1,2-dihydrobenzen 87.9 1.3 4.4E-05 40.0 7.5 69 128-212 2-74 (334)
66 3q2i_A Dehydrogenase; rossmann 87.4 1.3 4.3E-05 40.4 7.2 69 126-212 11-83 (354)
67 3luy_A Probable chorismate mut 86.9 2.3 8E-05 39.4 8.7 61 50-112 216-276 (329)
68 1wy5_A TILS, hypothetical UPF0 86.9 2.2 7.6E-05 38.6 8.5 80 99-188 4-91 (317)
69 3evn_A Oxidoreductase, GFO/IDH 86.3 1.4 4.7E-05 39.8 6.7 67 127-211 4-74 (329)
70 1r0k_A 1-deoxy-D-xylulose 5-ph 85.7 2.5 8.6E-05 40.1 8.4 77 128-211 4-100 (388)
71 3e9m_A Oxidoreductase, GFO/IDH 85.3 2 6.7E-05 38.8 7.3 69 127-212 4-75 (330)
72 3s1t_A Aspartokinase; ACT doma 85.2 1.3 4.6E-05 37.2 5.7 63 41-116 95-160 (181)
73 3ip3_A Oxidoreductase, putativ 84.7 3.6 0.00012 37.1 8.7 71 128-211 2-74 (337)
74 3mz0_A Inositol 2-dehydrogenas 84.6 2.4 8.2E-05 38.3 7.5 70 128-212 2-74 (344)
75 3rc1_A Sugar 3-ketoreductase; 84.5 1.8 6.1E-05 39.6 6.6 66 127-211 26-96 (350)
76 1zh8_A Oxidoreductase; TM0312, 84.3 2.7 9.2E-05 38.1 7.7 70 125-211 15-89 (340)
77 3ec7_A Putative dehydrogenase; 84.3 2.8 9.7E-05 38.3 7.9 70 127-212 22-95 (357)
78 1ni5_A Putative cell cycle pro 83.8 3.9 0.00013 38.9 8.8 61 128-188 13-80 (433)
79 3u3x_A Oxidoreductase; structu 83.7 3.9 0.00013 37.5 8.6 68 128-211 26-95 (361)
80 3euw_A MYO-inositol dehydrogen 83.7 1.9 6.6E-05 38.9 6.4 68 127-212 3-73 (344)
81 4h3v_A Oxidoreductase domain p 83.5 2.5 8.4E-05 38.2 7.1 71 128-211 6-82 (390)
82 4hkt_A Inositol 2-dehydrogenas 83.5 2.8 9.6E-05 37.6 7.4 66 128-212 3-71 (331)
83 3moi_A Probable dehydrogenase; 83.1 1.9 6.7E-05 39.8 6.3 66 128-212 2-72 (387)
84 3cea_A MYO-inositol 2-dehydrog 83.1 5.6 0.00019 35.7 9.3 69 126-211 6-78 (346)
85 3ezy_A Dehydrogenase; structur 82.3 3.1 0.00011 37.6 7.2 68 128-212 2-72 (344)
86 1ydw_A AX110P-like protein; st 81.7 4.2 0.00015 37.0 8.0 70 126-212 4-79 (362)
87 3uuw_A Putative oxidoreductase 81.6 2.6 9E-05 37.4 6.4 67 128-212 6-74 (308)
88 3dty_A Oxidoreductase, GFO/IDH 80.8 4.3 0.00015 37.6 7.8 72 127-212 11-93 (398)
89 2p2s_A Putative oxidoreductase 80.3 5.2 0.00018 35.9 8.0 68 128-211 4-73 (336)
90 3db2_A Putative NADPH-dependen 79.9 3.5 0.00012 37.4 6.7 69 127-212 4-74 (354)
91 2ho3_A Oxidoreductase, GFO/IDH 79.2 5.5 0.00019 35.6 7.7 67 128-212 1-70 (325)
92 1zhv_A Hypothetical protein AT 79.2 1.5 5.3E-05 35.5 3.6 35 43-77 63-100 (134)
93 1phz_A Protein (phenylalanine 78.7 5 0.00017 38.6 7.6 66 41-112 33-101 (429)
94 3btv_A Galactose/lactose metab 78.6 7.9 0.00027 36.5 9.0 68 127-211 19-96 (438)
95 2nvw_A Galactose/lactose metab 78.5 8.1 0.00028 37.1 9.1 49 127-183 38-92 (479)
96 3v5n_A Oxidoreductase; structu 78.1 3.1 0.00011 39.0 5.9 72 127-212 36-118 (417)
97 4huj_A Uncharacterized protein 77.3 3.9 0.00013 34.7 5.8 67 128-213 23-90 (220)
98 2dt5_A AT-rich DNA-binding pro 76.9 4.5 0.00015 34.9 6.1 68 126-211 78-147 (211)
99 3nkl_A UDP-D-quinovosamine 4-d 76.9 8.9 0.0003 29.6 7.4 38 126-166 2-39 (141)
100 3fwz_A Inner membrane protein 76.6 8.4 0.00029 30.0 7.3 71 126-211 5-78 (140)
101 3e18_A Oxidoreductase; dehydro 75.2 2.8 9.4E-05 38.4 4.6 67 127-212 4-73 (359)
102 3keo_A Redox-sensing transcrip 74.4 4.3 0.00015 35.2 5.4 93 125-231 81-178 (212)
103 3ic5_A Putative saccharopine d 74.0 21 0.00072 25.8 8.6 73 127-212 4-77 (118)
104 3c1m_A Probable aspartokinase; 73.9 4.8 0.00016 38.8 6.1 37 40-76 316-355 (473)
105 3k32_A Uncharacterized protein 73.2 8.5 0.00029 32.4 6.9 56 128-188 6-64 (203)
106 2y1e_A 1-deoxy-D-xylulose 5-ph 73.1 9.3 0.00032 36.3 7.6 80 126-211 19-112 (398)
107 2fhm_A Probable acylphosphatas 72.9 13 0.00045 27.5 7.2 58 102-163 17-74 (91)
108 3oqb_A Oxidoreductase; structu 72.8 15 0.00051 33.5 9.0 73 126-213 4-92 (383)
109 3mah_A Aspartokinase; aspartat 72.2 7.1 0.00024 31.5 5.9 60 39-110 15-77 (157)
110 1rwu_A Hypothetical UPF0250 pr 71.9 22 0.00075 27.6 8.4 68 37-111 31-101 (109)
111 1zvp_A Hypothetical protein VC 71.1 4.5 0.00015 32.7 4.4 35 43-77 72-109 (133)
112 1tlt_A Putative oxidoreductase 70.8 14 0.00048 32.7 8.1 47 128-183 5-54 (319)
113 3s2u_A UDP-N-acetylglucosamine 70.2 13 0.00044 33.8 7.8 79 128-213 2-101 (365)
114 3a2k_A TRNA(Ile)-lysidine synt 69.4 8.8 0.0003 36.7 6.8 60 128-188 18-85 (464)
115 3llv_A Exopolyphosphatase-rela 68.7 12 0.00042 28.6 6.4 69 128-211 6-77 (141)
116 1ulr_A Putative acylphosphatas 68.7 21 0.00072 26.2 7.4 59 101-163 16-74 (88)
117 3p52_A NH(3)-dependent NAD(+) 68.6 27 0.00093 30.5 9.3 78 98-188 5-87 (249)
118 3m2t_A Probable dehydrogenase; 68.6 7.1 0.00024 35.6 5.7 66 128-211 5-75 (359)
119 3tvi_A Aspartokinase; structur 68.5 24 0.00081 33.8 9.6 81 43-137 299-383 (446)
120 1k92_A Argininosuccinate synth 68.0 12 0.00043 36.0 7.5 58 126-188 8-71 (455)
121 3au8_A 1-deoxy-D-xylulose 5-ph 67.5 24 0.00082 34.3 9.3 83 125-211 74-180 (488)
122 3rh0_A Arsenate reductase; oxi 67.1 12 0.00043 30.3 6.3 80 125-211 17-99 (148)
123 3abi_A Putative uncharacterize 66.8 15 0.0005 33.5 7.5 71 125-211 13-84 (365)
124 3tri_A Pyrroline-5-carboxylate 66.7 11 0.00037 33.3 6.4 71 128-215 3-74 (280)
125 2glx_A 1,5-anhydro-D-fructose 66.7 10 0.00035 33.6 6.3 64 129-211 1-69 (332)
126 3ab4_A Aspartokinase; aspartat 66.1 13 0.00046 34.9 7.2 63 41-116 343-408 (421)
127 3o9z_A Lipopolysaccaride biosy 65.1 16 0.00055 32.7 7.3 68 127-211 2-79 (312)
128 1q0q_A 1-deoxy-D-xylulose 5-ph 64.0 22 0.00076 33.8 8.2 58 125-188 6-65 (406)
129 2ahr_A Putative pyrroline carb 63.9 7.5 0.00026 33.3 4.7 66 127-212 2-68 (259)
130 2e18_A NH(3)-dependent NAD(+) 63.9 28 0.00095 30.1 8.4 75 98-188 5-82 (257)
131 3bl5_A Queuosine biosynthesis 63.8 22 0.00076 29.3 7.5 55 129-188 4-63 (219)
132 3tvi_A Aspartokinase; structur 63.6 16 0.00055 35.0 7.3 62 41-113 373-437 (446)
133 1w2i_A Acylphosphatase; hydrol 63.4 22 0.00075 26.3 6.6 59 101-163 18-76 (91)
134 3c1m_A Probable aspartokinase; 62.1 12 0.00042 35.9 6.2 64 41-115 403-469 (473)
135 3bio_A Oxidoreductase, GFO/IDH 61.7 10 0.00035 33.9 5.3 34 128-165 9-43 (304)
136 1xea_A Oxidoreductase, GFO/IDH 61.3 10 0.00035 33.7 5.2 47 128-184 2-51 (323)
137 3rsc_A CALG2; TDP, enediyne, s 61.2 31 0.0011 30.9 8.6 55 125-188 17-74 (415)
138 3oj0_A Glutr, glutamyl-tRNA re 60.8 17 0.00057 28.2 5.8 69 128-213 21-89 (144)
139 3lm8_A Thiamine pyrophosphokin 60.5 7.7 0.00026 33.7 4.1 56 157-213 44-102 (222)
140 1h6d_A Precursor form of gluco 60.3 16 0.00054 34.3 6.6 51 126-183 81-132 (433)
141 2hma_A Probable tRNA (5-methyl 60.0 19 0.00064 33.6 6.9 57 127-188 8-77 (376)
142 3trg_A Acylphosphatase; fatty 59.9 27 0.00091 26.3 6.6 59 101-163 26-84 (98)
143 2bjd_A Acylphosphatase; hypert 59.6 27 0.00093 26.4 6.6 60 100-163 27-86 (101)
144 1lss_A TRK system potassium up 59.5 34 0.0012 25.5 7.3 71 128-211 4-76 (140)
145 1urr_A CG18505 protein; acylph 59.3 33 0.0011 25.9 7.1 59 101-163 25-84 (102)
146 1vl2_A Argininosuccinate synth 59.3 18 0.0006 34.6 6.7 59 125-188 11-73 (421)
147 2h78_A Hibadh, 3-hydroxyisobut 58.6 24 0.00082 30.8 7.1 64 127-211 2-66 (302)
148 3okp_A GDP-mannose-dependent a 58.5 34 0.0011 30.0 8.1 79 127-212 3-94 (394)
149 1np3_A Ketol-acid reductoisome 58.3 22 0.00076 32.2 7.0 65 128-213 16-81 (338)
150 3otg_A CALG1; calicheamicin, T 57.9 40 0.0014 30.0 8.6 56 125-189 17-75 (412)
151 3hbm_A UDP-sugar hydrolase; PS 57.9 32 0.0011 30.7 7.8 82 129-226 1-89 (282)
152 2cdq_A Aspartokinase; aspartat 57.3 32 0.0011 33.5 8.3 84 42-136 341-428 (510)
153 2vt3_A REX, redox-sensing tran 56.9 7.4 0.00025 33.6 3.3 68 127-211 84-152 (215)
154 1uv7_A General secretion pathw 56.2 57 0.0019 25.1 8.1 65 51-125 21-85 (110)
155 3e82_A Putative oxidoreductase 56.1 43 0.0015 30.3 8.6 36 126-165 5-42 (364)
156 1jl3_A Arsenate reductase; alp 55.4 31 0.001 27.2 6.6 75 128-211 3-81 (139)
157 1xng_A NH(3)-dependent NAD(+) 55.2 44 0.0015 29.1 8.2 57 128-188 25-86 (268)
158 3oti_A CALG3; calicheamicin, T 55.0 58 0.002 29.1 9.3 53 126-188 18-73 (398)
159 3doj_A AT3G25530, dehydrogenas 55.0 20 0.00069 31.8 6.0 66 125-211 18-84 (310)
160 1sur_A PAPS reductase; assimil 54.9 15 0.00051 30.8 4.9 55 129-188 45-104 (215)
161 3l4b_C TRKA K+ channel protien 54.8 24 0.00083 29.2 6.2 50 129-188 1-51 (218)
162 2der_A TRNA-specific 2-thiouri 54.7 20 0.00068 33.5 6.2 58 126-188 15-85 (380)
163 3loq_A Universal stress protei 54.7 1E+02 0.0034 26.3 10.9 107 107-215 147-262 (294)
164 4etn_A LMPTP, low molecular we 54.4 25 0.00084 29.6 6.1 81 126-213 32-119 (184)
165 2nz2_A Argininosuccinate synth 54.1 29 0.001 32.8 7.2 56 128-188 5-64 (413)
166 2vh7_A Acylphosphatase-1; hydr 54.0 40 0.0014 25.2 6.8 58 101-162 22-80 (99)
167 2czc_A Glyceraldehyde-3-phosph 54.0 61 0.0021 29.3 9.2 50 128-185 2-52 (334)
168 1p8a_A Protein tyrosine phosph 53.8 36 0.0012 27.0 6.9 82 127-213 3-88 (146)
169 2cwd_A Low molecular weight ph 53.7 34 0.0012 27.7 6.8 82 126-213 2-92 (161)
170 3oa2_A WBPB; oxidoreductase, s 53.6 36 0.0012 30.4 7.5 68 127-211 2-80 (318)
171 2h9z_A Hypothetical protein HP 53.5 22 0.00076 26.2 5.1 67 37-111 10-78 (86)
172 3c85_A Putative glutathione-re 53.4 27 0.00093 28.0 6.1 70 128-211 39-112 (183)
173 2i6u_A Otcase, ornithine carba 53.4 1.2E+02 0.0039 27.6 10.9 30 176-213 197-226 (307)
174 1b7g_O Protein (glyceraldehyde 53.0 52 0.0018 30.0 8.6 51 128-186 1-52 (340)
175 3gt0_A Pyrroline-5-carboxylate 52.8 10 0.00036 32.4 3.6 68 128-212 2-71 (247)
176 3l9w_A Glutathione-regulated p 52.6 27 0.00093 32.8 6.8 50 128-188 4-54 (413)
177 2lxf_A Uncharacterized protein 52.5 27 0.00091 27.6 5.6 75 83-164 33-107 (121)
178 2pg3_A Queuosine biosynthesis 52.2 28 0.00096 29.4 6.3 56 128-188 2-63 (232)
179 3mah_A Aspartokinase; aspartat 52.1 19 0.00064 28.9 4.9 62 41-115 87-151 (157)
180 3c1a_A Putative oxidoreductase 51.6 13 0.00043 33.0 4.1 37 124-165 6-44 (315)
181 3k94_A Thiamin pyrophosphokina 51.5 8.2 0.00028 33.6 2.7 55 158-213 44-101 (223)
182 2ixa_A Alpha-N-acetylgalactosa 51.1 45 0.0015 31.1 8.1 73 127-212 19-99 (444)
183 2axq_A Saccharopine dehydrogen 50.9 42 0.0014 32.1 7.9 72 127-211 22-95 (467)
184 1f0k_A MURG, UDP-N-acetylgluco 50.8 96 0.0033 26.8 9.8 78 129-213 7-105 (364)
185 4fgw_A Glycerol-3-phosphate de 50.7 15 0.00051 34.7 4.6 24 125-148 31-55 (391)
186 3kux_A Putative oxidoreductase 50.6 34 0.0012 30.7 6.9 36 126-165 5-42 (352)
187 1id1_A Putative potassium chan 50.4 36 0.0012 26.4 6.3 72 128-211 3-78 (153)
188 4fzr_A SSFS6; structural genom 50.2 73 0.0025 28.4 9.1 54 125-188 12-69 (398)
189 3dm5_A SRP54, signal recogniti 49.9 1.7E+02 0.0058 27.8 11.9 126 53-188 29-162 (443)
190 2gv1_A Probable acylphosphatas 49.4 29 0.00098 25.7 5.2 57 102-162 19-76 (92)
191 3fiu_A NH(3)-dependent NAD(+) 49.2 75 0.0026 27.6 8.7 78 97-188 7-89 (249)
192 3upl_A Oxidoreductase; rossman 48.9 78 0.0027 30.3 9.4 65 96-181 4-70 (446)
193 3i23_A Oxidoreductase, GFO/IDH 48.8 17 0.00059 32.7 4.6 66 128-211 2-72 (349)
194 1u2p_A Ptpase, low molecular w 48.3 57 0.002 26.3 7.3 81 127-214 3-92 (163)
195 3v7e_A Ribosome-associated pro 48.2 13 0.00044 27.0 3.0 43 144-188 18-60 (82)
196 2g1u_A Hypothetical protein TM 48.1 25 0.00085 27.5 5.0 72 126-211 17-91 (155)
197 2cdq_A Aspartokinase; aspartat 48.0 39 0.0013 32.9 7.2 65 41-116 419-485 (510)
198 3jvi_A Protein tyrosine phosph 46.6 39 0.0013 27.5 6.0 82 127-214 3-93 (161)
199 4dio_A NAD(P) transhydrogenase 45.9 78 0.0027 29.9 8.8 146 57-227 124-304 (405)
200 1pvv_A Otcase, ornithine carba 45.7 1.4E+02 0.0048 27.1 10.2 16 198-213 217-232 (315)
201 3gdo_A Uncharacterized oxidore 45.7 54 0.0018 29.6 7.4 35 127-165 4-40 (358)
202 4etm_A LMPTP, low molecular we 45.6 44 0.0015 27.6 6.3 83 125-212 15-106 (173)
203 2ywb_A GMP synthase [glutamine 45.5 55 0.0019 31.4 7.9 55 129-188 210-269 (503)
204 3dtt_A NADP oxidoreductase; st 44.9 31 0.0011 29.4 5.5 20 127-146 18-38 (245)
205 3brv_A Inhibitor of nuclear fa 44.2 5.7 0.0002 26.7 0.4 30 3-32 18-47 (48)
206 1vlv_A Otcase, ornithine carba 44.0 1.2E+02 0.0043 27.6 9.6 31 175-213 215-245 (325)
207 2pjk_A 178AA long hypothetical 44.0 34 0.0011 28.4 5.3 81 125-222 12-99 (178)
208 4dll_A 2-hydroxy-3-oxopropiona 43.7 62 0.0021 28.7 7.4 64 127-211 30-94 (320)
209 1zzg_A Glucose-6-phosphate iso 43.7 16 0.00054 34.8 3.6 55 130-188 118-181 (415)
210 3d1l_A Putative NADP oxidoredu 43.4 16 0.00053 31.4 3.2 48 128-184 10-58 (266)
211 3t38_A Arsenate reductase; low 43.3 66 0.0023 27.6 7.2 82 126-214 79-163 (213)
212 2wmy_A WZB, putative acid phos 42.6 79 0.0027 25.2 7.2 80 128-214 8-91 (150)
213 3ia7_A CALG4; glycosysltransfe 42.6 69 0.0024 28.2 7.6 51 128-188 4-58 (402)
214 4ggo_A Trans-2-enoyl-COA reduc 42.2 1.2E+02 0.0039 28.8 9.2 86 126-214 48-151 (401)
215 3fhl_A Putative oxidoreductase 42.2 33 0.0011 31.0 5.4 35 127-165 4-40 (362)
216 3f4l_A Putative oxidoreductase 42.1 12 0.00042 33.7 2.4 35 128-166 2-39 (345)
217 3ggo_A Prephenate dehydrogenas 41.6 68 0.0023 28.6 7.4 70 128-214 33-104 (314)
218 2g5c_A Prephenate dehydrogenas 40.8 38 0.0013 29.1 5.4 47 128-183 1-48 (281)
219 2l17_A Synarsc, arsenate reduc 40.7 30 0.001 27.2 4.3 83 128-218 4-90 (134)
220 3j21_Z 50S ribosomal protein L 40.0 27 0.00091 26.1 3.7 48 134-187 16-63 (99)
221 2lbw_A H/ACA ribonucleoprotein 39.8 39 0.0013 26.2 4.8 52 145-203 28-80 (121)
222 3ff1_A Glucose-6-phosphate iso 39.7 28 0.00096 33.5 4.6 73 96-188 117-199 (446)
223 4ffl_A PYLC; amino acid, biosy 38.4 50 0.0017 29.5 6.0 74 128-216 1-74 (363)
224 4ep1_A Otcase, ornithine carba 38.1 2.2E+02 0.0074 26.2 10.3 29 177-213 228-256 (340)
225 3pzy_A MOG; ssgcid, seattle st 38.0 32 0.0011 28.1 4.2 75 127-222 6-84 (164)
226 4ew6_A D-galactose-1-dehydroge 37.9 1.3E+02 0.0045 26.7 8.7 91 127-223 24-149 (330)
227 3d4o_A Dipicolinate synthase s 37.9 1.2E+02 0.004 26.5 8.3 85 128-231 155-242 (293)
228 3ktd_A Prephenate dehydrogenas 37.8 96 0.0033 28.3 7.8 71 128-215 8-79 (341)
229 1vq3_A Phosphoribosylformylgly 37.5 1.1E+02 0.0039 22.9 6.9 60 41-113 16-80 (94)
230 2q8n_A Glucose-6-phosphate iso 37.2 23 0.00078 34.2 3.6 55 130-188 142-204 (460)
231 1leh_A Leucine dehydrogenase; 36.7 51 0.0018 30.6 5.8 82 128-230 173-256 (364)
232 4g65_A TRK system potassium up 36.5 66 0.0023 30.5 6.7 52 127-188 2-54 (461)
233 3h4t_A Glycosyltransferase GTF 36.2 2E+02 0.0068 25.8 9.8 50 129-188 1-54 (404)
234 1v4v_A UDP-N-acetylglucosamine 35.7 2.2E+02 0.0075 24.7 10.5 83 127-213 4-100 (376)
235 3tqi_A GMP synthase [glutamine 34.9 43 0.0015 32.5 5.2 56 129-188 231-292 (527)
236 3g0o_A 3-hydroxyisobutyrate de 34.8 63 0.0021 28.3 5.9 66 126-211 5-71 (303)
237 2xzm_U Ribosomal protein L7AE 34.6 54 0.0018 25.8 4.9 48 135-189 26-75 (126)
238 2z2v_A Hypothetical protein PH 34.6 49 0.0017 30.4 5.3 71 124-211 12-84 (365)
239 2rir_A Dipicolinate synthase, 34.1 1.3E+02 0.0045 26.2 8.0 86 127-231 156-244 (300)
240 3iz5_f 60S ribosomal protein L 34.0 24 0.00082 27.3 2.6 49 134-188 27-75 (112)
241 2o8v_A Phosphoadenosine phosph 33.9 47 0.0016 28.7 4.9 55 129-188 46-105 (252)
242 3fr7_A Putative ketol-acid red 33.9 92 0.0032 30.6 7.3 50 129-183 55-106 (525)
243 3qsg_A NAD-binding phosphogluc 33.9 42 0.0014 29.8 4.6 66 127-211 23-90 (312)
244 3l8m_A Probable thiamine pyrop 33.6 81 0.0028 26.8 6.2 55 157-213 41-98 (212)
245 1vpd_A Tartronate semialdehyde 33.3 82 0.0028 27.1 6.4 62 129-211 6-68 (299)
246 4eez_A Alcohol dehydrogenase 1 33.3 1.5E+02 0.0051 26.0 8.3 75 127-211 163-239 (348)
247 2xw6_A MGS, methylglyoxal synt 33.2 37 0.0013 27.3 3.7 73 127-210 2-80 (134)
248 1d1q_A Tyrosine phosphatase (E 33.2 93 0.0032 25.0 6.3 80 127-213 6-96 (161)
249 3tsa_A SPNG, NDP-rhamnosyltran 33.2 1.2E+02 0.0042 26.6 7.6 50 128-187 1-54 (391)
250 1yb4_A Tartronic semialdehyde 33.0 46 0.0016 28.6 4.7 19 128-146 3-22 (295)
251 3v7q_A Probable ribosomal prot 32.9 33 0.0011 25.7 3.2 49 134-188 20-68 (101)
252 2ale_A SNU13, NHP2/L7AE family 32.6 51 0.0018 26.2 4.4 52 145-203 40-92 (134)
253 4had_A Probable oxidoreductase 32.6 39 0.0013 30.1 4.2 77 140-224 76-155 (350)
254 1kor_A Argininosuccinate synth 32.5 72 0.0025 29.9 6.2 55 130-188 2-60 (400)
255 1x7d_A Ornithine cyclodeaminas 32.3 98 0.0034 28.2 7.0 86 127-231 128-223 (350)
256 1tq8_A Hypothetical protein RV 32.2 1.8E+02 0.006 22.6 9.9 89 126-215 15-130 (163)
257 3p2y_A Alanine dehydrogenase/p 32.2 1.6E+02 0.0054 27.5 8.4 149 57-226 118-293 (381)
258 2vxo_A GMP synthase [glutamine 32.1 92 0.0031 31.5 7.2 57 129-188 241-302 (697)
259 2iyf_A OLED, oleandomycin glyc 32.0 1.9E+02 0.0064 25.8 8.8 52 128-188 7-61 (430)
260 2r6j_A Eugenol synthase 1; phe 31.7 2.2E+02 0.0074 24.3 8.9 76 128-214 11-90 (318)
261 1vbk_A Hypothetical protein PH 31.6 72 0.0025 28.6 5.8 78 128-215 179-266 (307)
262 3olq_A Universal stress protei 31.3 1.8E+02 0.006 24.9 8.2 42 173-216 233-278 (319)
263 1rlg_A 50S ribosomal protein L 31.3 85 0.0029 24.1 5.5 52 145-203 35-87 (119)
264 3uhf_A Glutamate racemase; str 31.2 47 0.0016 29.6 4.4 40 120-163 16-57 (274)
265 4fb5_A Probable oxidoreductase 31.2 63 0.0022 28.7 5.4 77 140-224 84-163 (393)
266 2wja_A Putative acid phosphata 31.1 93 0.0032 25.4 6.0 81 128-214 26-109 (168)
267 3iwt_A 178AA long hypothetical 31.1 1E+02 0.0034 24.9 6.2 80 125-220 12-97 (178)
268 3pdu_A 3-hydroxyisobutyrate de 31.0 55 0.0019 28.3 4.8 63 128-211 1-64 (287)
269 3ecs_A Translation initiation 31.0 1.4E+02 0.005 27.1 7.8 69 131-210 123-195 (315)
270 1zun_A Sulfate adenylyltransfe 30.9 70 0.0024 29.0 5.6 58 130-188 48-110 (325)
271 3n8i_A Low molecular weight ph 30.7 79 0.0027 25.5 5.4 82 127-214 4-94 (157)
272 1kjq_A GART 2, phosphoribosylg 30.7 1.2E+02 0.0043 27.0 7.3 74 125-214 8-83 (391)
273 3beo_A UDP-N-acetylglucosamine 30.5 2.6E+02 0.0089 24.0 11.2 84 126-213 6-104 (375)
274 3grf_A Ornithine carbamoyltran 30.5 3.1E+02 0.011 24.9 10.8 74 128-213 161-243 (328)
275 4gpa_A Glutamate receptor 4; P 30.4 2.6E+02 0.009 24.0 9.8 120 103-228 82-208 (389)
276 3b1f_A Putative prephenate deh 30.3 1.1E+02 0.0037 26.3 6.6 47 128-183 6-53 (290)
277 2hmt_A YUAA protein; RCK, KTN, 30.2 60 0.0021 24.1 4.4 70 128-211 6-77 (144)
278 3cky_A 2-hydroxymethyl glutara 29.8 72 0.0025 27.5 5.4 20 127-146 3-23 (301)
279 2pn1_A Carbamoylphosphate synt 29.8 1E+02 0.0036 26.7 6.5 71 128-210 4-78 (331)
280 3on1_A BH2414 protein; structu 29.8 31 0.0011 25.8 2.6 49 134-188 19-67 (101)
281 3hdj_A Probable ornithine cycl 29.8 1.3E+02 0.0044 27.0 7.2 94 127-238 120-220 (313)
282 1vq8_F 50S ribosomal protein L 29.5 85 0.0029 24.1 5.2 59 134-203 30-89 (120)
283 3gd5_A Otcase, ornithine carba 29.5 3.2E+02 0.011 24.8 10.6 30 176-213 205-234 (323)
284 3dlo_A Universal stress protei 29.5 80 0.0027 24.5 5.2 43 173-215 83-128 (155)
285 1xbi_A 50S ribosomal protein L 29.2 72 0.0025 24.6 4.7 49 134-188 30-79 (120)
286 1c1d_A L-phenylalanine dehydro 29.1 2.5E+02 0.0084 25.9 9.1 81 128-230 175-257 (355)
287 1tdj_A Biosynthetic threonine 29.0 46 0.0016 32.4 4.3 35 41-77 337-371 (514)
288 3pef_A 6-phosphogluconate dehy 28.9 77 0.0026 27.3 5.4 62 129-211 2-64 (287)
289 3qwb_A Probable quinone oxidor 28.8 2.9E+02 0.0099 24.0 9.5 72 128-211 149-224 (334)
290 4f3y_A DHPR, dihydrodipicolina 28.8 34 0.0012 30.4 3.0 34 128-165 7-42 (272)
291 2vns_A Metalloreductase steap3 28.8 87 0.003 26.0 5.5 65 127-213 27-92 (215)
292 3dbi_A Sugar-binding transcrip 28.7 1E+02 0.0036 26.6 6.3 40 173-212 85-127 (338)
293 3qk7_A Transcriptional regulat 28.7 1.5E+02 0.0052 24.9 7.3 72 99-189 25-96 (294)
294 2pbq_A Molybdenum cofactor bio 28.6 73 0.0025 26.1 4.9 13 126-138 3-15 (178)
295 2fqx_A Membrane lipoprotein TM 28.4 76 0.0026 27.8 5.4 43 172-214 28-72 (318)
296 4eye_A Probable oxidoreductase 28.3 2.3E+02 0.0079 24.9 8.7 71 128-211 160-234 (342)
297 4ina_A Saccharopine dehydrogen 28.2 1.3E+02 0.0043 27.8 7.0 74 128-211 1-83 (405)
298 4gwg_A 6-phosphogluconate dehy 28.2 1E+02 0.0035 29.6 6.6 70 127-211 3-75 (484)
299 3o74_A Fructose transport syst 28.0 2.3E+02 0.0079 23.1 8.2 72 99-188 17-89 (272)
300 1w41_A 50S ribosomal protein L 28.0 32 0.0011 25.7 2.3 52 145-203 24-76 (101)
301 4egs_A Ribose 5-phosphate isom 27.9 84 0.0029 26.0 5.2 82 125-212 31-120 (180)
302 3ruf_A WBGU; rossmann fold, UD 27.9 2.7E+02 0.0092 24.0 8.9 75 128-213 25-110 (351)
303 2fc3_A 50S ribosomal protein L 27.8 97 0.0033 23.9 5.3 52 145-203 36-88 (124)
304 8abp_A L-arabinose-binding pro 27.8 1.7E+02 0.0058 24.5 7.4 73 99-188 17-89 (306)
305 1bg6_A N-(1-D-carboxylethyl)-L 27.6 1.3E+02 0.0045 26.4 6.8 20 128-147 4-24 (359)
306 1pgj_A 6PGDH, 6-PGDH, 6-phosph 27.6 67 0.0023 30.6 5.1 68 129-211 2-75 (478)
307 2gi4_A Possible phosphotyrosin 27.4 1.4E+02 0.0049 23.8 6.4 81 128-213 1-90 (156)
308 3gms_A Putative NADPH:quinone 27.4 1.7E+02 0.006 25.6 7.6 74 128-211 145-220 (340)
309 2l82_A Designed protein OR32; 27.2 2E+02 0.0067 22.7 6.8 79 130-211 3-84 (162)
310 3ijp_A DHPR, dihydrodipicolina 27.0 48 0.0016 29.8 3.7 36 126-165 19-56 (288)
311 3c24_A Putative oxidoreductase 26.9 98 0.0034 26.6 5.7 45 128-183 11-57 (286)
312 1gpj_A Glutamyl-tRNA reductase 26.8 77 0.0026 29.3 5.2 80 127-224 166-249 (404)
313 2dpl_A GMP synthetase, GMP syn 26.8 96 0.0033 27.7 5.7 56 129-188 21-82 (308)
314 1jf8_A Arsenate reductase; ptp 26.7 1E+02 0.0034 23.9 5.2 76 128-211 3-81 (131)
315 2aif_A Ribosomal protein L7A; 26.6 62 0.0021 25.6 4.0 40 145-188 49-91 (135)
316 3k96_A Glycerol-3-phosphate de 26.5 36 0.0012 31.2 2.8 21 127-147 28-49 (356)
317 3cpq_A 50S ribosomal protein L 26.4 34 0.0012 26.0 2.3 59 134-203 22-81 (110)
318 2ln3_A De novo designed protei 26.4 48 0.0016 23.6 2.8 47 87-138 30-77 (83)
319 1wxi_A NH(3)-dependent NAD(+) 26.4 70 0.0024 28.2 4.7 61 128-188 40-110 (275)
320 2f1k_A Prephenate dehydrogenas 26.2 1.1E+02 0.0039 25.9 5.9 44 129-183 1-45 (279)
321 3dzc_A UDP-N-acetylglucosamine 26.1 3.6E+02 0.012 24.3 11.2 84 126-213 23-120 (396)
322 3tnj_A Universal stress protei 26.0 94 0.0032 23.3 4.9 39 174-214 77-119 (150)
323 3s99_A Basic membrane lipoprot 26.0 47 0.0016 30.4 3.6 42 173-214 50-96 (356)
324 1uqr_A 3-dehydroquinate dehydr 25.8 1.5E+02 0.005 24.4 6.1 70 95-187 24-99 (154)
325 3o85_A Ribosomal protein L7AE; 25.8 94 0.0032 24.1 4.8 49 134-188 32-81 (122)
326 3gqv_A Enoyl reductase; medium 25.8 3E+02 0.01 24.5 9.0 71 128-211 165-238 (371)
327 3l6d_A Putative oxidoreductase 25.8 71 0.0024 28.1 4.6 65 126-211 7-72 (306)
328 3c1o_A Eugenol synthase; pheny 25.7 1.6E+02 0.0055 25.2 6.9 78 127-214 3-88 (321)
329 1r2q_A RAS-related protein RAB 25.7 2.1E+02 0.007 21.2 7.1 33 158-190 113-151 (170)
330 3k4h_A Putative transcriptiona 25.6 2.4E+02 0.0082 23.3 7.9 71 99-188 28-99 (292)
331 3rot_A ABC sugar transporter, 25.5 2.4E+02 0.0083 23.6 8.0 71 99-188 18-93 (297)
332 2oq2_A Phosphoadenosine phosph 25.1 84 0.0029 27.2 4.9 57 130-188 43-108 (261)
333 4dim_A Phosphoribosylglycinami 25.1 1.6E+02 0.0054 26.5 7.0 72 128-213 7-80 (403)
334 2izz_A Pyrroline-5-carboxylate 25.0 82 0.0028 27.9 4.9 17 128-144 22-39 (322)
335 3by5_A Cobalamin biosynthesis 24.9 1.5E+02 0.0051 24.2 6.1 55 131-188 12-71 (155)
336 2dwc_A PH0318, 433AA long hypo 24.8 2.6E+02 0.009 25.3 8.6 73 127-215 18-92 (433)
337 1qv9_A F420-dependent methylen 24.8 1.5E+02 0.0051 26.5 6.3 30 156-188 65-98 (283)
338 3nbm_A PTS system, lactose-spe 24.7 2.3E+02 0.0077 21.4 6.8 61 126-188 4-85 (108)
339 3m9w_A D-xylose-binding peripl 24.6 3E+02 0.01 23.2 8.4 73 99-188 17-90 (313)
340 2iya_A OLEI, oleandomycin glyc 24.5 3.5E+02 0.012 24.0 9.2 52 127-188 11-66 (424)
341 3h5o_A Transcriptional regulat 24.4 1.4E+02 0.0048 25.9 6.3 43 172-214 83-128 (339)
342 2cvz_A Dehydrogenase, 3-hydrox 24.3 1.2E+02 0.0041 25.7 5.7 20 128-147 1-21 (289)
343 2c5s_A THII, probable thiamine 24.2 1.5E+02 0.0052 27.6 6.8 56 128-188 187-253 (413)
344 1ff9_A Saccharopine reductase; 24.0 1.4E+02 0.0046 28.2 6.5 70 128-211 3-75 (450)
345 4hhu_A OR280; engineered prote 23.9 2.7E+02 0.0094 22.1 8.0 30 157-186 123-156 (170)
346 3jyn_A Quinone oxidoreductase; 23.9 3.5E+02 0.012 23.5 8.9 72 128-211 141-216 (325)
347 3gi1_A LBP, laminin-binding pr 23.7 1.2E+02 0.0041 26.8 5.7 17 172-188 219-235 (286)
348 3r6d_A NAD-dependent epimerase 23.7 1.8E+02 0.006 23.4 6.5 45 195-239 64-114 (221)
349 4gyw_A UDP-N-acetylglucosamine 23.6 2.1E+02 0.0073 28.6 8.2 91 125-221 234-332 (723)
350 2hqb_A Transcriptional activat 23.5 85 0.0029 27.1 4.7 43 172-214 28-73 (296)
351 4e21_A 6-phosphogluconate dehy 23.4 1.4E+02 0.0049 27.2 6.3 66 128-211 22-88 (358)
352 1b0z_A Protein (phosphoglucose 23.3 69 0.0024 30.6 4.3 55 130-188 132-196 (445)
353 3hn2_A 2-dehydropantoate 2-red 23.3 1.4E+02 0.0049 26.1 6.2 44 129-185 3-47 (312)
354 2a0u_A Initiation factor 2B; S 23.3 2.3E+02 0.0077 26.5 7.7 76 137-231 194-275 (383)
355 3k9c_A Transcriptional regulat 23.2 3.3E+02 0.011 22.7 8.8 71 99-189 26-96 (289)
356 1p0f_A NADP-dependent alcohol 23.2 2E+02 0.0069 25.6 7.3 72 128-211 192-268 (373)
357 3hbm_A UDP-sugar hydrolase; PS 23.1 2.9E+02 0.01 24.2 8.2 75 128-213 157-234 (282)
358 1mli_A Muconolactone isomerase 23.0 2.5E+02 0.0084 21.2 8.2 80 83-166 2-88 (96)
359 2lxi_A RNA-binding protein 10; 23.0 92 0.0032 22.0 4.1 67 56-128 15-83 (91)
360 1aps_A Acylphosphatase; hydrol 22.9 44 0.0015 25.0 2.3 55 101-159 21-76 (98)
361 2pgd_A 6-phosphogluconate dehy 22.9 1.4E+02 0.0048 28.3 6.4 67 128-211 2-73 (482)
362 1vb5_A Translation initiation 22.8 3.2E+02 0.011 24.0 8.4 75 131-217 111-189 (276)
363 2w6k_A COBE; biosynthetic prot 22.7 1.7E+02 0.0058 23.4 6.0 57 131-188 13-75 (145)
364 3n05_A NH(3)-dependent NAD(+) 22.7 2E+02 0.0069 28.0 7.6 60 127-188 325-388 (590)
365 3jyw_G 60S ribosomal protein L 22.6 1.2E+02 0.004 23.5 4.7 43 144-190 32-77 (113)
366 2uyy_A N-PAC protein; long-cha 22.6 1.2E+02 0.0041 26.4 5.5 63 128-211 30-93 (316)
367 1e3i_A Alcohol dehydrogenase, 22.6 2.1E+02 0.0071 25.5 7.2 72 128-211 196-272 (376)
368 3l6u_A ABC-type sugar transpor 22.3 3.3E+02 0.011 22.4 9.2 73 99-188 23-96 (293)
369 2gas_A Isoflavone reductase; N 22.3 3E+02 0.01 23.1 7.9 78 128-215 2-88 (307)
370 3e3m_A Transcriptional regulat 22.1 1.5E+02 0.0052 25.9 6.1 41 173-213 92-135 (355)
371 2j5a_A 30S ribosomal protein S 22.1 2.6E+02 0.0088 21.1 6.7 52 52-106 25-86 (110)
372 3dhn_A NAD-dependent epimerase 22.1 1.5E+02 0.0051 23.9 5.7 17 195-211 58-74 (227)
373 2bon_A Lipid kinase; DAG kinas 21.9 2.6E+02 0.0089 24.8 7.7 9 204-212 82-90 (332)
374 3cx3_A Lipoprotein; zinc-bindi 21.9 1.2E+02 0.0041 26.6 5.3 36 172-210 217-255 (284)
375 1jqk_A CODH, carbon monoxide d 21.9 2.8E+02 0.0094 27.9 8.4 98 128-240 255-366 (639)
376 3e61_A Putative transcriptiona 21.8 1.2E+02 0.0042 25.1 5.2 48 172-223 29-79 (277)
377 2gf2_A Hibadh, 3-hydroxyisobut 21.8 1.3E+02 0.0044 25.8 5.4 62 129-211 1-63 (296)
378 2fts_A Gephyrin; gephyrin, neu 21.7 92 0.0031 29.3 4.7 48 173-221 213-264 (419)
379 3ulk_A Ketol-acid reductoisome 21.7 1.5E+02 0.0051 28.9 6.2 80 101-188 9-93 (491)
380 2ioj_A Hypothetical protein AF 21.5 90 0.0031 24.2 4.0 30 158-188 75-105 (139)
381 2wm3_A NMRA-like family domain 21.5 3.6E+02 0.012 22.6 9.2 72 128-211 5-79 (299)
382 1gpm_A GMP synthetase, XMP ami 21.4 1.3E+02 0.0044 29.0 5.9 56 129-188 228-289 (525)
383 3tnl_A Shikimate dehydrogenase 21.4 3.1E+02 0.011 24.6 8.1 74 128-211 154-233 (315)
384 1l7d_A Nicotinamide nucleotide 21.3 4.6E+02 0.016 23.7 10.0 94 127-231 171-292 (384)
385 2i99_A MU-crystallin homolog; 21.2 2E+02 0.0069 25.3 6.8 69 127-212 134-204 (312)
386 3hnr_A Probable methyltransfer 21.1 3.1E+02 0.011 21.7 7.7 74 127-220 45-122 (220)
387 2q5c_A NTRC family transcripti 21.1 2.9E+02 0.0099 22.8 7.3 75 142-226 84-160 (196)
388 1su8_A CODH 2, carbon monoxide 21.1 2.5E+02 0.0084 28.2 7.8 98 128-240 251-361 (636)
389 3fpc_A NADP-dependent alcohol 20.9 1.1E+02 0.0039 27.0 5.0 73 127-211 166-242 (352)
390 4ezb_A Uncharacterized conserv 20.8 58 0.002 29.0 3.0 21 126-146 22-43 (317)
391 2hk9_A Shikimate dehydrogenase 20.8 88 0.003 27.1 4.2 65 128-213 129-195 (275)
392 1v8b_A Adenosylhomocysteinase; 20.7 2.4E+02 0.0082 27.1 7.5 83 127-231 256-342 (479)
393 3tb6_A Arabinose metabolism tr 20.6 1.8E+02 0.0063 24.1 6.1 43 172-214 36-81 (298)
394 1evy_A Glycerol-3-phosphate de 20.6 1.4E+02 0.0048 26.6 5.6 17 130-146 17-34 (366)
395 1yqg_A Pyrroline-5-carboxylate 20.6 43 0.0015 28.3 2.0 47 129-184 1-48 (263)
396 3s40_A Diacylglycerol kinase; 20.3 2.3E+02 0.0078 24.8 6.9 10 127-136 7-16 (304)
397 1kqp_A NAD+ synthase, NH(3)-de 20.2 1.7E+02 0.006 25.4 6.0 61 128-188 38-106 (271)
398 2iz1_A 6-phosphogluconate dehy 20.2 93 0.0032 29.5 4.5 67 128-211 5-75 (474)
399 2x4g_A Nucleoside-diphosphate- 20.1 3.8E+02 0.013 22.8 8.2 73 127-214 12-88 (342)
No 1
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=100.00 E-value=1.7e-54 Score=403.48 Aligned_cols=208 Identities=31% Similarity=0.467 Sum_probs=189.5
Q ss_pred ccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcccceee
Q 023530 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (281)
Q Consensus 41 ~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~~~~ 120 (281)
.+++||++|+||||||++||++|+++|+||+|++|++++.+|.||||++++.|+...+.++|+++|++++++++|+ |
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~~~~~~L~~~l~~la~~l~m~---~ 97 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLPFDLDGFREAFTPIAEEFSMD---W 97 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSSSCHHHHHHHHHHHHHHHTCE---E
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCCCCHHHHHHHHHHHHHHhCCe---e
Confidence 6799999999999999999999999999999999999888999999999998864578999999999999999998 5
Q ss_pred eecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCCC--hHHH
Q 023530 121 RVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENE--REEE 197 (281)
Q Consensus 121 ~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~~--~e~~ 197 (281)
++.++++++|||||+||+||||++|++++++|+++++|++|||||| ++ .++|+++|||+++++ .+.++ +|++
T Consensus 98 ~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Visn~~---~~--~~~A~~~gIp~~~~~~~~~~r~~~~~~ 172 (302)
T 3o1l_A 98 RITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVISNHQ---DL--RSMVEWHDIPYYHVPVDPKDKEPAFAE 172 (302)
T ss_dssp EEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEESSS---TT--HHHHHTTTCCEEECCCCSSCCHHHHHH
T ss_pred eecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEECcH---HH--HHHHHHcCCCEEEcCCCcCCHHHHHHH
Confidence 6677888999999999999999999999999999999999999994 43 578999999999997 33333 3567
Q ss_pred HHHHHh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 198 l~~~L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
+.+.|+ ++|+|||||||||||++|++.|++|||| ||||+|||+ .|+|||+.+|++ |||+
T Consensus 173 ~~~~l~~~~~DliVlagym~IL~~~~l~~~~~~~INiHpSlLP~frG~----~p~~~Ai~~G~k~tG~Tv 238 (302)
T 3o1l_A 173 VSRLVGHHQADVVVLARYMQILPPQLCREYAHQVINIHHSFLPSFVGA----KPYHQASLRGVKLIGATC 238 (302)
T ss_dssp HHHHHHHTTCSEEEESSCCSCCCTTHHHHTTTCEEEEESSCTTSSCSS----CHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHhCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcccccCCCCc----cHHHHHHHcCCCeEEEEE
Confidence 889998 8999999999999999999999999999 999999997 899999999974 6654
No 2
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=100.00 E-value=1.5e-53 Score=395.48 Aligned_cols=213 Identities=22% Similarity=0.391 Sum_probs=188.0
Q ss_pred CCCCcccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeC--CCCCCHHHHHHHHHHHhhhh
Q 023530 36 VSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFD--PIKWPREQMDEDFFKLSKMF 113 (281)
Q Consensus 36 ~~~~~~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p--~~~~~~~~L~~~L~~la~~l 113 (281)
|+....+++||++|+||||||++||++|+++|+||+|++|+++..+|.||||++|+.+ +...+.++|+++|+++|+++
T Consensus 4 ~~~~~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~~~L~~~f~~la~~~ 83 (292)
T 3lou_A 4 VPQRPHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADALRVDALRREFEPIAERF 83 (292)
T ss_dssp ----CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----CCHHHHHHHHHHHHHHH
T ss_pred CcCCCCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCCCHHHHHHHHHHHHHhc
Confidence 5555678999999999999999999999999999999999988889999999999987 43468999999999999999
Q ss_pred cccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCC-CCC
Q 023530 114 NAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA-KEN 192 (281)
Q Consensus 114 ~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~-k~~ 192 (281)
+++ |++.+.++++||+||+||+||||++|+++++.|+++++|++|||||| ++ .++|+++|||+++++. +.+
T Consensus 84 ~m~---~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~---~~--~~~A~~~gIp~~~~~~~~~~ 155 (292)
T 3lou_A 84 RMQ---WAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVSNHP---DF--APLAAQHGLPFRHFPITADT 155 (292)
T ss_dssp TCE---EEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSS---TT--HHHHHHTTCCEEECCCCSSC
T ss_pred CcE---EEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEeCcH---HH--HHHHHHcCCCEEEeCCCcCC
Confidence 998 56777888999999999999999999999999999999999999994 44 4679999999999883 322
Q ss_pred C--hHHHHHHHHh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 193 E--REEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 193 ~--~e~~l~~~L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
+ +|+++.+.|+ ++|+|||||||||||++|++.|++|||| ||||+|||+ .|+|||+.+|++ |||+
T Consensus 156 r~~~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSlLP~~rG~----~p~~~Ai~~G~~~~G~Tv 228 (292)
T 3lou_A 156 KAQQEAQWLDVFETSGAELVILARYMQVLSPEASARLANRAINIHHSFLPGFKGA----KPYHQAHARGVKLIGATA 228 (292)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEECSSCCCSS----CHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEecCchhhCCHHHHhhhcCCeEEeCCCcCcCCCCc----cHHHHHHHcCCCeEEEEE
Confidence 2 3567889998 8999999999999999999999999999 999999997 899999999984 6554
No 3
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=100.00 E-value=3e-53 Score=392.52 Aligned_cols=211 Identities=21% Similarity=0.324 Sum_probs=189.0
Q ss_pred CCCcccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhccc
Q 023530 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (281)
Q Consensus 37 ~~~~~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~ 116 (281)
+....+++||++|+||||||++||++|+++|+||+|++|+++..+|.||||++++.|+ ..+.++|+++|+++|++++++
T Consensus 3 ~~~~~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~-~~~~~~L~~~f~~la~~l~m~ 81 (286)
T 3n0v_A 3 SRAPDTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD-DFDEAGFRAGLAERSEAFGMA 81 (286)
T ss_dssp ----CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS-SCCHHHHHHHHHHHHGGGTCE
T ss_pred cccCCcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC-CCCHHHHHHHHHHHHHHcCCE
Confidence 3335679999999999999999999999999999999999888899999999999987 788999999999999999998
Q ss_pred ceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCC-CCCC--
Q 023530 117 RSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA-KENE-- 193 (281)
Q Consensus 117 ~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~-k~~~-- 193 (281)
|++.+.++++||+||+||+||||++|++++++|+++++|++|||||| ++ .++|+++|||+++++. +.++
T Consensus 82 ---~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~---~~--~~~A~~~gIp~~~~~~~~~~r~~ 153 (286)
T 3n0v_A 82 ---FELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVSNHP---DL--EPLAHWHKIPYYHFALDPKDKPG 153 (286)
T ss_dssp ---EEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEESSS---TT--HHHHHHTTCCEEECCCBTTBHHH
T ss_pred ---EEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEeCcH---HH--HHHHHHcCCCEEEeCCCcCCHHH
Confidence 56778888999999999999999999999999999999999999994 44 4679999999999883 3222
Q ss_pred hHHHHHHHHh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcC--CCcce
Q 023530 194 REEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTD--KGCLC 260 (281)
Q Consensus 194 ~e~~l~~~L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d--~g~~~ 260 (281)
+|+++.+.|+ ++|+|||||||||||++|++.|++|||| ||||+|||+ .|+|||+.+|+ +|||+
T Consensus 154 ~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSlLP~~rG~----~p~~~Ai~~G~~~~G~Tv 223 (286)
T 3n0v_A 154 QERKVLQVIEETGAELVILARYMQVLSPELCRRLDGWAINIHHSLLPGFKGA----KPYHQAYNKGVKMVGATA 223 (286)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEECSSTTCCCS----CHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEecccccccCHHHHhhhcCCeEEeccccccCCCCc----cHHHHHHHcCCCeEEEEE
Confidence 3567889998 8999999999999999999999999999 999999997 89999999997 45554
No 4
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.8e-53 Score=394.41 Aligned_cols=209 Identities=26% Similarity=0.399 Sum_probs=189.1
Q ss_pred ccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcccceee
Q 023530 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (281)
Q Consensus 41 ~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~~~~ 120 (281)
.+++||++|+||||||++||++|+++|+||+|++|+++..+|.||||+++++|+...+.++|+++|++++++++|+ |
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~L~~~f~~la~~~~m~---~ 81 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVIPLASLRTGFGVIAAKFTMG---W 81 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCCCCHHHHHHHHHHHHHHTTCE---E
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCCCCHHHHHHHHHHHHHHcCCE---E
Confidence 4699999999999999999999999999999999998888999999999999875578999999999999999998 5
Q ss_pred eecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCC-CCCC--hHHH
Q 023530 121 RVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA-KENE--REEE 197 (281)
Q Consensus 121 ~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~-k~~~--~e~~ 197 (281)
++.+.++++|||||+||+||||++|++++++|+++++|++|||||| ++ +.++|+++|||+++++. +.++ +|++
T Consensus 82 ~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~p--~~--~~~~A~~~gIp~~~~~~~~~~r~~~~~~ 157 (288)
T 3obi_A 82 HMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNHP--RE--TFSGFDFGDIPFYHFPVNKDTRRQQEAA 157 (288)
T ss_dssp EEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESSC--GG--GSCCTTTTTCCEEECCCCTTTHHHHHHH
T ss_pred EeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEcCCC--hh--HHHHHHHcCCCEEEeCCCcccHHHHHHH
Confidence 6777888999999999999999999999999999999999999983 12 45789999999999983 3222 3567
Q ss_pred HHHHHh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 198 l~~~L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
+.+.|+ ++|+|||||||||||++|++.|++|||| ||||+|||+ .|+|||+.+|++ |||+
T Consensus 158 ~~~~l~~~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpSlLP~~rG~----~p~~~A~~~G~~~~G~Tv 223 (288)
T 3obi_A 158 ITALIAQTHTDLVVLARYMQILSDEMSARLAGRCINIHHSFLPGFKGA----KPYHQAFDRGVKLIGATA 223 (288)
T ss_dssp HHHHHHHHTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEECSSCCCSS----CHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHhcCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcccccCCCCc----hHHHHHHHcCCCEEEEEE
Confidence 889988 8999999999999999999999999999 999999997 899999999974 6555
No 5
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=100.00 E-value=1e-53 Score=395.81 Aligned_cols=208 Identities=27% Similarity=0.404 Sum_probs=186.2
Q ss_pred cccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhccccee
Q 023530 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (281)
Q Consensus 40 ~~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~~~ 119 (281)
..+++||++|+||||||++||++|+++|+||+|++|+++..+|.||||++++.+. .+.++|+++|++++++++|+
T Consensus 5 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~--~~~~~L~~~f~~la~~~~m~--- 79 (287)
T 3nrb_A 5 NNQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPV--AGVNDFNSAFGKVVEKYNAE--- 79 (287)
T ss_dssp TTEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC-----CHHHHHHHHHHGGGTCE---
T ss_pred CCeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCC--CCHHHHHHHHHHHHHHcCCe---
Confidence 4679999999999999999999999999999999999888899999999999875 35679999999999999998
Q ss_pred eeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCC-CC--hHH
Q 023530 120 VRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NE--REE 196 (281)
Q Consensus 120 ~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~-~~--~e~ 196 (281)
|++.++++++|||||+||+||||++|++++++|+++++|++||||| +++ +.++|+++|||+++++.+. ++ +|+
T Consensus 80 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~---~~a-~~~~A~~~gIp~~~~~~~~~~r~~~~~ 155 (287)
T 3nrb_A 80 WWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNH---PRE-ALSVSLVGDIPFHYLPVTPATKAAQES 155 (287)
T ss_dssp EEEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESS---CGG-GCCCCCCTTSCEEECCCCGGGHHHHHH
T ss_pred eEeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEeCC---hHH-HHHHHHHcCCCEEEEeccCcchhhHHH
Confidence 5667788899999999999999999999999999999999999999 444 6789999999999998332 22 356
Q ss_pred HHHHHHh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 197 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 197 ~l~~~L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
++++.|+ ++|+|||||||||||++|++.|++|||| ||||+|||+ .|+|||+.+|++ |||+
T Consensus 156 ~~~~~l~~~~~Dlivlagym~il~~~~l~~~~~~~iNiHpSlLP~~rG~----~p~~~Ai~~G~k~tG~Tv 222 (287)
T 3nrb_A 156 QIKNIVTQSQADLIVLARYMQILSDDLSAFLSGRCINIHHSFLPGFKGA----KPYHQAHTRGVKLIGATA 222 (287)
T ss_dssp HHHHHHHHHTCSEEEESSCCSCCCHHHHHHHTTSEEEEESSCTTTTCSS----CHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHhCCCEEEhhhhhhhcCHHHHhhccCCeEEECcccccCCCCc----hHHHHHHHcCCCeEEEEE
Confidence 7889888 8999999999999999999999999999 999999997 899999999974 5554
No 6
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=99.97 E-value=7.9e-32 Score=239.30 Aligned_cols=126 Identities=23% Similarity=0.282 Sum_probs=113.3
Q ss_pred CeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCCC---hHHHHHHHHh
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENE---REEELLELVQ 203 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~~---~e~~l~~~L~ 203 (281)
|+|||||+||+||||++|+++++.|+++++|++||||+ ++++++++|+++|||+++++ .+..+ +|+++.+.|+
T Consensus 2 m~riavl~Sg~Gsnl~ali~~~~~~~l~~eI~~Visn~---~~a~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~ 78 (211)
T 3p9x_A 2 MKRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDK---PGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLK 78 (211)
T ss_dssp -CEEEEECCTTCHHHHHHHHHHHTTCCSSEEEEEEESC---SSSHHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCchHHHHHHHHHHcCCCCcEEEEEEECC---CCcHHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHH
Confidence 68999999999999999999999999999999999998 67899999999999999987 33322 2567888888
Q ss_pred --CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 204 --NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 204 --~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
++|+||+||||+||+++|++.|+++||| ||||+|||+ .|++||+++|++ |||+
T Consensus 79 ~~~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpSLLP~yrG~----~pi~~Ai~~G~~~tGvTv 138 (211)
T 3p9x_A 79 EKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSLLPAFPGL----HAIEQAIRANVKVTGVTI 138 (211)
T ss_dssp HTTCCEEEESSCCSCCCHHHHHHHTTSEEEEESSCTTSSCSS----CHHHHHHHTTCSEEEEEE
T ss_pred hcCCCEEEEeCchhhcCHHHHhhccCCeEEECCccCCCCCCc----cHHHHHHHcCCCeEEEEE
Confidence 8999999999999999999999999999 999999997 999999999974 5554
No 7
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=99.97 E-value=5.4e-31 Score=234.58 Aligned_cols=127 Identities=20% Similarity=0.251 Sum_probs=113.3
Q ss_pred CCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCCC---hHHHHHHH
Q 023530 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENE---REEELLEL 201 (281)
Q Consensus 126 ~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~~---~e~~l~~~ 201 (281)
.+++|||||+||+||||++|++++++| ++++|++||||+ ++++++++|+++|||+++++ .+..+ +|+++.+.
T Consensus 3 ~~~~riavl~SG~Gsnl~all~~~~~~-~~~eI~~Vis~~---~~a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~ 78 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNLQAIIGAIQKG-LAIEIRAVISNR---ADAYGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKT 78 (215)
T ss_dssp -CCEEEEEEESSCCHHHHHHHHHHHTT-CSEEEEEEEESC---TTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHH
T ss_pred CCCcEEEEEEeCCcHHHHHHHHHHHcC-CCCEEEEEEeCC---cchHHHHHHHHcCCCEEEeCccccCchhHhHHHHHHH
Confidence 457899999999999999999999999 999999999998 67889999999999999987 32222 35678888
Q ss_pred Hh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 202 VQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 202 L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
|+ ++|+||+|||||||+++|++.|+++||| ||||+|||+ .+++||+++|++ |||+
T Consensus 79 l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSLLP~yrG~----~pi~~Ai~~G~~~tGvTv 140 (215)
T 3tqr_A 79 IDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSLLPKYTGL----NTHERALAAGETEHGVSV 140 (215)
T ss_dssp HHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSSTTTTCSS----CHHHHHHHTTCSEEEEEE
T ss_pred HHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCcccCCCCCCh----hHHHHHHHcCCCeEEEEE
Confidence 88 8999999999999999999999999999 999999997 999999999975 5544
No 8
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=99.97 E-value=8.7e-31 Score=232.34 Aligned_cols=126 Identities=20% Similarity=0.220 Sum_probs=113.1
Q ss_pred CeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCC-CCCC---hHHHHHHHHh
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA-KENE---REEELLELVQ 203 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~-k~~~---~e~~l~~~L~ 203 (281)
++||+||+||+||||++|++++++|.++++|++||||+ |+++++++|+++|||+++++. +... +|+++.+.|+
T Consensus 7 ~~ri~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~---~~a~~l~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~ 83 (209)
T 4ds3_A 7 RNRVVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDK---AEAGGLAKAEAAGIATQVFKRKDFASKEAHEDAILAALD 83 (209)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESC---TTCTHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CccEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECC---cccHHHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999998 677899999999999999873 3222 2567888888
Q ss_pred --CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 204 --NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 204 --~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
++|+||+|||||||+++|++.|+++||| ||||+|||+ .|++||+++|++ |||+
T Consensus 84 ~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSLLP~yrG~----~pi~~Ai~~G~~~tGvTv 143 (209)
T 4ds3_A 84 VLKPDIICLAGYMRLLSGRFIAPYEGRILNIHPSLLPLFPGL----HTHQRALDAGMKLAGCTV 143 (209)
T ss_dssp HHCCSEEEESSCCSCCCHHHHGGGTTCEEEEESSCTTSSCSS----CHHHHHHHTTCSEEEEEE
T ss_pred hcCCCEEEEeccccCcCHHHHhhccCCeEEECCccccCCCCh----hHHHHHHHcCCCeEEEEE
Confidence 8999999999999999999999999999 999999997 999999999974 4444
No 9
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=99.97 E-value=8.8e-31 Score=233.20 Aligned_cols=127 Identities=22% Similarity=0.272 Sum_probs=112.3
Q ss_pred CCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--
Q 023530 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (281)
Q Consensus 126 ~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~-- 203 (281)
.+++||+||+||+||||++|+++++++.++++|++||||+ |+++++++|+++|||+++++.+..+ ++++.+.|+
T Consensus 6 ~~~~ri~vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~---~~a~~l~~A~~~gIp~~~~~~~~~~-~~~~~~~L~~~ 81 (215)
T 3kcq_A 6 KKELRVGVLISGRGSNLEALAKAFSTEESSVVISCVISNN---AEARGLLIAQSYGIPTFVVKRKPLD-IEHISTVLREH 81 (215)
T ss_dssp -CCEEEEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESC---TTCTHHHHHHHTTCCEEECCBTTBC-HHHHHHHHHHT
T ss_pred CCCCEEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCC---cchHHHHHHHHcCCCEEEeCcccCC-hHHHHHHHHHh
Confidence 5678999999999999999999999999999999999998 6778999999999999998743222 357888888
Q ss_pred CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 204 NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 204 ~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
++|+||+|||||||+++|++.|+++||| ||||+|||+ .|++||+++|++ |||+
T Consensus 82 ~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpSLLP~yrG~----~pi~~Ai~~G~~~tGvTv 139 (215)
T 3kcq_A 82 DVDLVCLAGFMSILPEKFVTDWHHKIINIHPSLLPSFKGL----NAQEQAYKAGVKIAGCTL 139 (215)
T ss_dssp TCSEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTTTCSS----CHHHHHHHHTCSEEEEEE
T ss_pred CCCEEEEeCCceEeCHHHHhhccCCeEEECcccccCCCCc----cHHHHHHHcCCCeEEEEE
Confidence 8999999999999999999999999999 999999997 999999999974 5544
No 10
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=99.97 E-value=4.8e-30 Score=228.47 Aligned_cols=127 Identities=15% Similarity=0.118 Sum_probs=111.4
Q ss_pred CCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCC-CCC---hHHHHHH
Q 023530 125 IDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENE---REEELLE 200 (281)
Q Consensus 125 ~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k-~~~---~e~~l~~ 200 (281)
+..++||+||+||+||||++|+++++. .++++|++|+||+ +++++++|+++|||+++++.+ ..+ +|+++.+
T Consensus 9 ~~~~~ri~vl~SG~gsnl~all~~~~~-~~~~eI~~Vis~~----~a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~ 83 (215)
T 3da8_A 9 PSAPARLVVLASGTGSLLRSLLDAAVG-DYPARVVAVGVDR----ECRAAEIAAEASVPVFTVRLADHPSRDAWDVAITA 83 (215)
T ss_dssp CCSSEEEEEEESSCCHHHHHHHHHSST-TCSEEEEEEEESS----CCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHH
T ss_pred CCCCcEEEEEEeCChHHHHHHHHHHhc-cCCCeEEEEEeCC----chHHHHHHHHcCCCEEEeCcccccchhhhhHHHHH
Confidence 467889999999999999999999865 6789999999996 378999999999999998722 222 2567888
Q ss_pred HHh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 201 LVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 201 ~L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
.|+ ++|+||+|||||||+++|++.|+++||| ||||+|||+ .|++||+++|++ |||+
T Consensus 84 ~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpSLLP~yrG~----~pi~~Ai~~G~~~tGvTv 146 (215)
T 3da8_A 84 ATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGT----HGVADALAYGVKVTGATV 146 (215)
T ss_dssp HHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEESSCTTSSCST----THHHHHHHHTCSEEEEEE
T ss_pred HHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCcccccCCCCc----hHHHHHHHcCCCeEEEEE
Confidence 888 8999999999999999999999999999 999999997 999999999974 5544
No 11
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=99.96 E-value=1.8e-29 Score=223.71 Aligned_cols=126 Identities=21% Similarity=0.188 Sum_probs=111.8
Q ss_pred eeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCCC---hHHHHHHHHh-
Q 023530 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENE---REEELLELVQ- 203 (281)
Q Consensus 129 ~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~~---~e~~l~~~L~- 203 (281)
+|||||+||+|+||++|++++++++++++|++|+||+ +++.++++|+++|||+++++ .+..+ +|+++.+.|+
T Consensus 1 ~riaVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~---~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 77 (209)
T 1meo_A 1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNK---AAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEE 77 (209)
T ss_dssp CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESS---TTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred CeEEEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCC---CChHHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHh
Confidence 4899999999999999999999999889999999997 56789999999999999887 32222 2467888888
Q ss_pred -CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Cccee
Q 023530 204 -NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLCS 261 (281)
Q Consensus 204 -~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~~ 261 (281)
++|+||+||||+||+++|++.|+++||| ||||+|||+ .|++||+++|++ |||+-
T Consensus 78 ~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~----~pi~~Ai~~G~~~tGvTvh 137 (209)
T 1meo_A 78 FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGS----NAHEQALETGVTVTGCTVH 137 (209)
T ss_dssp TTCCEEEEESCCSCCCHHHHHHTTTSEEEEESSSTTSSCSS----CHHHHHHHHTCSEEEEEEE
T ss_pred cCCCEEEEcchhhhCCHHHHhhhcCCEEEEccCcCcCCCCc----cHHHHHHHcCCCcEEEEEE
Confidence 8999999999999999999999999999 999999997 999999999984 55543
No 12
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=99.96 E-value=1.9e-29 Score=224.04 Aligned_cols=125 Identities=21% Similarity=0.229 Sum_probs=111.7
Q ss_pred eeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCCC---hHHHHHHHHh-
Q 023530 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENE---REEELLELVQ- 203 (281)
Q Consensus 129 ~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~~---~e~~l~~~L~- 203 (281)
+|||||+||+||||++|++++++++++++|++|+||+ ++++++++|+++|||+++++ .+..+ +++++.+.|+
T Consensus 1 ~ri~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~---~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 77 (212)
T 1jkx_A 1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNK---ADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDM 77 (212)
T ss_dssp CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESC---TTCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGG
T ss_pred CEEEEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCC---CchHHHHHHHHcCCcEEEeCcccccchhhccHHHHHHHHh
Confidence 5899999999999999999999999999999999997 56789999999999999987 33222 2567888888
Q ss_pred -CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 204 -NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 204 -~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
++|+||+|||||||+++|++.|+++||| ||||+|||+ .|++||+++|++ |||+
T Consensus 78 ~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSlLP~yrG~----~pi~~ai~~G~~~tGvTv 136 (212)
T 1jkx_A 78 YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGL----HTHRQALENGDEEHGTSV 136 (212)
T ss_dssp GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTSCCSS----CHHHHHHHTTCSEEEEEE
T ss_pred cCCCEEEEeChhhhCCHHHHhhccCCEEEEccCcccCCCCc----cHHHHHHHcCCCceEEEE
Confidence 8999999999999999999999999999 999999997 899999999974 4444
No 13
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=99.96 E-value=5.7e-29 Score=220.80 Aligned_cols=127 Identities=19% Similarity=0.235 Sum_probs=112.8
Q ss_pred CCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCCC---hHHHHHHHH
Q 023530 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENE---REEELLELV 202 (281)
Q Consensus 127 ~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~~---~e~~l~~~L 202 (281)
+|+||+||+||+|+|++++++++.++.++++|++|+||+ ++++++++|+++|||+++++ .+..+ +|+++.+.|
T Consensus 2 ~m~ki~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~---~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l 78 (212)
T 3av3_A 2 HMKRLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDR---PGAKVIERAARENVPAFVFSPKDYPSKAAFESEILREL 78 (212)
T ss_dssp CCEEEEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESS---TTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred CCcEEEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCC---CCcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHH
Confidence 478999999999999999999999998889999999997 57799999999999999987 33222 256788888
Q ss_pred h--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 203 Q--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 203 ~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
+ ++|+||+|||||||+++|++.|+++||| ||||+|||+ .|++||+++|++ |||+
T Consensus 79 ~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~----~pi~~Ai~~G~~~tGvTv 139 (212)
T 3av3_A 79 KGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPSLLPAFPGK----DAIGQAYRAGVSETGVTV 139 (212)
T ss_dssp HHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEESSCTTSSCST----THHHHHHHHTCSEEEEEE
T ss_pred HhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEecCcCCCCCCc----CHHHHHHHcCCCeEEEEE
Confidence 8 8999999999999999999999999999 999999997 999999999974 4444
No 14
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=99.96 E-value=7.7e-29 Score=222.54 Aligned_cols=132 Identities=23% Similarity=0.228 Sum_probs=116.1
Q ss_pred ecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCCC---hHHH
Q 023530 122 VPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENE---REEE 197 (281)
Q Consensus 122 ~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~~---~e~~ 197 (281)
+.+++.|+||+||+||+|+|++++++++.++.++++|++||||+ ++++++++|+++|||+++++ .+... +|++
T Consensus 16 ~~~~~~~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~---~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~ 92 (229)
T 3auf_A 16 LYFQGHMIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDR---ADAYGLERARRAGVDALHMDPAAYPSRTAFDAA 92 (229)
T ss_dssp SSCBTTCEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESS---TTCHHHHHHHHTTCEEEECCGGGSSSHHHHHHH
T ss_pred ccccCCCcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCC---CchHHHHHHHHcCCCEEEECcccccchhhccHH
Confidence 34567789999999999999999999999888889999999997 57789999999999999987 33222 2567
Q ss_pred HHHHHh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 198 l~~~L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
+.+.|+ ++|+||+|||||||+++|++.|+++||| ||||+|||+ .|++||+++|++ |||+
T Consensus 93 ~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpSLLP~yrG~----~pi~~Ai~~G~~~tGvTv 158 (229)
T 3auf_A 93 LAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPSLLPAFPGL----EAQRQALEHGVKVAGCTV 158 (229)
T ss_dssp HHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEESSCTTSSCSS----CHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEccCcCcCCCCc----CHHHHHHHcCCCeEEEEE
Confidence 888888 8999999999999999999999999999 999999997 999999999984 5544
No 15
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=99.95 E-value=3e-28 Score=216.70 Aligned_cols=126 Identities=21% Similarity=0.276 Sum_probs=111.6
Q ss_pred CeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCC-CCCC---hHHHHHHHHh
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA-KENE---REEELLELVQ 203 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~-k~~~---~e~~l~~~L~ 203 (281)
|+||+||+||+|+|++++++++.++.++++|++|+||+ ++++++++|+++|||+++++. +..+ +++++.+.|+
T Consensus 1 m~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~---~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~ 77 (216)
T 2ywr_A 1 MLKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDN---PKAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALELK 77 (216)
T ss_dssp CEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESC---TTCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCC---CChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHH
Confidence 57999999999999999999999888788999999997 567899999999999999873 2222 2467888888
Q ss_pred --CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 204 --NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 204 --~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
++|+||+|||||||+++|++.|+++||| ||||+|||+ .|++||+++|++ |||+
T Consensus 78 ~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~----~pi~~ai~~G~~~tGvTv 137 (216)
T 2ywr_A 78 KKGVELVVLAGFMRILSHNFLKYFPNKVINIHPSLIPAFQGL----HAQKQAVEFGVKFSGCTV 137 (216)
T ss_dssp HTTCCEEEESSCCSCCCHHHHTTSTTCEEEEESSCTTTTCST----THHHHHHHHTCSEEEEEE
T ss_pred hcCCCEEEEeCchhhCCHHHHhhccCCeEEEcCCcCcCCCCc----cHHHHHHHcCCCeEEEEE
Confidence 8999999999999999999999999999 999999997 899999999984 5554
No 16
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=99.89 E-value=3.8e-23 Score=193.19 Aligned_cols=121 Identities=17% Similarity=0.190 Sum_probs=102.1
Q ss_pred CCeeEEEEeeCC--hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC--------hhHHHHHHhCCCCEEEeCCCCCChHH
Q 023530 127 PKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPN--------SHVIRFLERHGIPYHYLCAKENEREE 196 (281)
Q Consensus 127 ~~~rIavl~Sg~--GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~--------a~~~~~A~~~gIP~~~i~~k~~~~e~ 196 (281)
.++||+||+|+. .+||++|++. | ++|++|+|| ||+|. +++.++|+++|||++... +. + ++
T Consensus 2 ~~mrIvf~Gt~~fa~~~L~~L~~~---~---~~i~~Vvt~-pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~-~~-~-~~ 71 (314)
T 1fmt_A 2 ESLRIIFAGTPDFAARHLDALLSS---G---HNVVGVFTQ-PDRPAGRGKKLMPSPVKVLAEEKGLPVFQPV-SL-R-PQ 71 (314)
T ss_dssp CCCEEEEEECSHHHHHHHHHHHHT---T---CEEEEEECC-CCBC------CBCCHHHHHHHHTTCCEECCS-CS-C-SH
T ss_pred CCCEEEEEecCHHHHHHHHHHHHC---C---CcEEEEEeC-CCCccccccccCcCHHHHHHHHcCCcEEecC-CC-C-CH
Confidence 468999999998 6999999984 4 699999998 66553 689999999999997643 22 1 34
Q ss_pred HHHHHHh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCCCccee
Q 023530 197 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDKGCLCS 261 (281)
Q Consensus 197 ~l~~~L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~g~~~~ 261 (281)
++.+.|+ ++|+||+||||+||+++|++.|+++||| ||||+|||+ +|+|||+++||+=..++
T Consensus 72 ~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSLLP~yRG~----~pi~~Ai~~G~~~tGvT 137 (314)
T 1fmt_A 72 ENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGA----APIQRSLWAGDAETGVT 137 (314)
T ss_dssp HHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSSTTTTBSS----CHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHhcCCCEEEEeeccccCCHHHHhhccCCEEEEcCCcCcCCCCc----CHHHHHHHcCCCceEEE
Confidence 5777777 8999999999999999999999999999 999999997 99999999997433333
No 17
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=99.88 E-value=4.4e-23 Score=192.03 Aligned_cols=119 Identities=16% Similarity=0.131 Sum_probs=99.9
Q ss_pred eeEEEEeeCC--hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC-----hhHHHHHHhCCCCEEEeCCCCCChHHHHHHH
Q 023530 129 YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPN-----SHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (281)
Q Consensus 129 ~rIavl~Sg~--GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~-----a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~ 201 (281)
|||+||+|+. ++||++|+++ + ++|++|+|| ||++. +++.++|+++|||+++.++. + +.++.+.
T Consensus 1 mrivf~gt~~fa~~~L~~L~~~---~---~~i~~Vvt~-~d~~~g~~~~~~v~~~A~~~gIpv~~~~~~--~-~~~~~~~ 70 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLAA---G---YEISAIFTH-TDNPGEKAFYGSVARLAAERGIPVYAPDNV--N-HPLWVER 70 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT---T---CEEEEEECC-CC------CCCCHHHHHHHHTCCEECCSCC--C-SHHHHHH
T ss_pred CEEEEEEcCHHHHHHHHHHHHC---C---CcEEEEEcC-CCCCCCCcCccHHHHHHHHcCCCEECCCcC--C-cHHHHHH
Confidence 5999999998 7999999985 3 699999998 45432 57999999999999997632 1 2346677
Q ss_pred Hh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCCCccee
Q 023530 202 VQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDKGCLCS 261 (281)
Q Consensus 202 L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~g~~~~ 261 (281)
|+ ++|+||+||||+||+++|++.|+++||| ||||+|||+ +|+|||+++||+=+.++
T Consensus 71 l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSLLP~yRG~----~pi~~ai~~G~~~tGvT 131 (305)
T 2bln_A 71 IAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGR----APLNWVLVNGETETGVT 131 (305)
T ss_dssp HHHTCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSCTTTTEES----CHHHHHHHTTCSEEEEE
T ss_pred HHhcCCCEEEEeccccccCHHHHhcCcCCEEEecCCcCcCCCCc----cHHHHHHHcCCCcEEEE
Confidence 76 8999999999999999999999999999 999999997 99999999998544443
No 18
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=99.87 E-value=5.2e-22 Score=185.88 Aligned_cols=120 Identities=15% Similarity=0.146 Sum_probs=100.0
Q ss_pred CeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCC--------ChhHHHHHHhCCCCEEEeCCCCCChHHH
Q 023530 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP--------NSHVIRFLERHGIPYHYLCAKENEREEE 197 (281)
Q Consensus 128 ~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~--------~a~~~~~A~~~gIP~~~i~~k~~~~e~~ 197 (281)
++||+||+|... .||++|+++ + ++|++|+|+ ||+| .+++.++|+++|||++... +. + +++
T Consensus 7 ~mrivf~Gt~~fa~~~L~~L~~~---~---~~v~~Vvt~-pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~-~~-~-~~~ 76 (318)
T 3q0i_A 7 SLRIVFAGTPDFAARHLAALLSS---E---HEIIAVYTQ-PERPAGRGKKLTASPVKTLALEHNVPVYQPE-NF-K-SDE 76 (318)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTS---S---SEEEEEECC-CC---------CCCHHHHHHHHTTCCEECCS-CS-C-SHH
T ss_pred CCEEEEEecCHHHHHHHHHHHHC---C---CcEEEEEcC-CCCcccccccCCCCHHHHHHHHcCCCEEccC-cC-C-CHH
Confidence 679999999984 899999984 3 699999998 6654 2688999999999997643 22 2 235
Q ss_pred HHHHHh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCCCccee
Q 023530 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDKGCLCS 261 (281)
Q Consensus 198 l~~~L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~g~~~~ 261 (281)
+.+.|+ ++|+||+||||+||+++|++.|+++||| ||||+|||+ +|+|||+++||+=+.++
T Consensus 77 ~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSlLP~yRG~----~pi~~Ai~~G~~~tGvT 141 (318)
T 3q0i_A 77 SKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGA----APIQRSIWAGDSETGVT 141 (318)
T ss_dssp HHHHHHTTCCSEEEESSCCSCCCHHHHTSSTTCEEEEESSSTTTTBSS----CHHHHHHHHTCSEEEEE
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHhhCcCCEEEeCCccCcCCCCc----CHHHHHHHcCCCeEEEE
Confidence 777787 8999999999999999999999999999 999999997 99999999998444443
No 19
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=99.86 E-value=4.6e-22 Score=200.22 Aligned_cols=119 Identities=15% Similarity=0.107 Sum_probs=100.2
Q ss_pred eeEEEEeeCC--hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC-----hhHHHHHHhCCCCEEEeCCCCCChHHHHHHH
Q 023530 129 YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPN-----SHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (281)
Q Consensus 129 ~rIavl~Sg~--GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~-----a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~ 201 (281)
+||+||+|+. ++||++|+++ +++|++|+||+ |++. ++++++|+++|||++++++.. +.++.+.
T Consensus 1 ~ri~~~~s~~~~~~~l~~l~~~------~~~i~~v~t~~-~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~---~~~~~~~ 70 (660)
T 1z7e_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHT-DNPGEKAFYGSVARLAAERGIPVYAPDNVN---HPLWVER 70 (660)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCC-C--------CCHHHHHHHHTCCEECCSCTT---SHHHHHH
T ss_pred CEEEEEEeCHHHHHHHHHHHhC------CCCEEEEEeCC-CCCccCcCccHHHHHHHHcCCCEeccCCCC---cHHHHHH
Confidence 5899999998 7999999985 36999999995 4332 579999999999999876321 2356677
Q ss_pred Hh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCCCccee
Q 023530 202 VQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDKGCLCS 261 (281)
Q Consensus 202 L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~g~~~~ 261 (281)
|+ ++|+||+|||||||+++|++.|+++||| ||||+|||+ .|+|||+++||+=..|+
T Consensus 71 l~~~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~slLP~~rG~----~p~~~ai~~g~~~~G~t 131 (660)
T 1z7e_A 71 IAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGR----APLNWVLVNGETETGVT 131 (660)
T ss_dssp HHHHCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSSTTTTCSS----CHHHHHHHTTCSEEEEE
T ss_pred HHhcCCCEEEEcCcccccCHHHHhcCCCCeEEecCCcCCCCCCc----cHHHHHHHcCCCcEEEE
Confidence 77 9999999999999999999999999999 999999997 89999999997433333
No 20
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=99.86 E-value=1.3e-21 Score=183.22 Aligned_cols=123 Identities=20% Similarity=0.192 Sum_probs=101.9
Q ss_pred CCCCeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCC--------ChhHHHHHHhCCCCEEEeCCCCCCh
Q 023530 125 IDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP--------NSHVIRFLERHGIPYHYLCAKENER 194 (281)
Q Consensus 125 ~~~~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~--------~a~~~~~A~~~gIP~~~i~~k~~~~ 194 (281)
++.|+||+||+|... .+|++|+++ + ++|++|+|+ ||+| .+++.++|+++|||++... +..+
T Consensus 1 ~~~mmrIvf~Gtp~fa~~~L~~L~~~---~---~~v~~Vvt~-pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~-~~~~- 71 (317)
T 3rfo_A 1 SNAMIKVVFMGTPDFSVPVLRRLIED---G---YDVIGVVTQ-PDRPVGRKKVLTPTPVKVEAEKHGIPVLQPL-RIRE- 71 (317)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHT---T---CEEEEEECC-CCCEETTTTEECCCHHHHHHHHTTCCEECCS-CTTS-
T ss_pred CCCceEEEEEeCCHHHHHHHHHHHHC---C---CcEEEEEeC-CCcccCCCcccCCCHHHHHHHHcCCCEEccc-cCCC-
Confidence 357899999999986 799999984 4 699999998 6653 3689999999999988743 2212
Q ss_pred HHHHHHHHh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCCCccee
Q 023530 195 EEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDKGCLCS 261 (281)
Q Consensus 195 e~~l~~~L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~g~~~~ 261 (281)
+ +..+.|+ ++|+||+|+||+||++++++.|+++||| ||||+|||+ +|+|||+++||+=+.++
T Consensus 72 ~-~~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSlLP~yRG~----~pi~~Ai~~G~~~tGvT 138 (317)
T 3rfo_A 72 K-DEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGG----APIHYAIMEGKEKTGIT 138 (317)
T ss_dssp H-HHHHHHHHHCCSEEEESSCCSCCCHHHHHSSTTCEEEEESSCTTSSBSS----CHHHHHHHTTCSEEEEE
T ss_pred H-HHHHHHHhcCCCEEEEcCchhhCCHHHHhhCcCCEEEECCccCcCCCCc----CHHHHHHHcCCCceEEE
Confidence 2 3456666 9999999999999999999999999999 999999997 99999999998543333
No 21
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=99.86 E-value=2.3e-21 Score=181.21 Aligned_cols=120 Identities=17% Similarity=0.160 Sum_probs=99.8
Q ss_pred CeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCC--------ChhHHHHHHhCCCCEEEeCCCCCChHHH
Q 023530 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP--------NSHVIRFLERHGIPYHYLCAKENEREEE 197 (281)
Q Consensus 128 ~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~--------~a~~~~~A~~~gIP~~~i~~k~~~~e~~ 197 (281)
++||+||+|... .+|++|+++ + .+|++|+|+ ||+| .+++.++|+++|||++... +. + +++
T Consensus 2 ~mrivf~Gtp~fa~~~L~~L~~~---~---~~v~~Vvt~-pd~~~grg~~l~~~~v~~~A~~~gIpv~~~~-~~-~-~~~ 71 (314)
T 3tqq_A 2 SLKIVFAGTPQFAVPTLRALIDS---S---HRVLAVYTQ-PDRPSGRGQKIMESPVKEIARQNEIPIIQPF-SL-R-DEV 71 (314)
T ss_dssp CCEEEEEECSGGGHHHHHHHHHS---S---SEEEEEECC-CC----------CCHHHHHHHHTTCCEECCS-CS-S-SHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHC---C---CeEEEEEeC-CCCccccCCccCCCHHHHHHHHcCCCEECcc-cC-C-CHH
Confidence 579999999985 789999874 4 599999997 6655 3689999999999987643 22 2 235
Q ss_pred HHHHHh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCCCccee
Q 023530 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDKGCLCS 261 (281)
Q Consensus 198 l~~~L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~g~~~~ 261 (281)
+.+.|+ ++|+||+||||+||++++++.|+++||| ||||+|||+ +|+|||+++||+=+.++
T Consensus 72 ~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~----~pi~~Ai~~G~~~tGvT 136 (314)
T 3tqq_A 72 EQEKLIAMNADVMVVVAYGLILPKKALNAFRLGCVNVHASLLPRWRGA----APIQRAILAGDRETGIS 136 (314)
T ss_dssp HHHHHHTTCCSEEEEESCCSCCCHHHHTSSTTCEEEEESSCTTTTBSS----CHHHHHHHHTCSEEEEE
T ss_pred HHHHHHhcCCCEEEEcCcccccCHHHHhhCcCCEEEecCccccCCCCc----cHHHHHHHcCCCeeEEE
Confidence 777777 8999999999999999999999999999 999999997 99999999998544444
No 22
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=99.85 E-value=1.6e-21 Score=183.28 Aligned_cols=122 Identities=16% Similarity=0.125 Sum_probs=96.9
Q ss_pred CeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCC--ChhHHHHHHhCCCCEEEeCCCC--CChHHHHHHH
Q 023530 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP--NSHVIRFLERHGIPYHYLCAKE--NEREEELLEL 201 (281)
Q Consensus 128 ~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~--~a~~~~~A~~~gIP~~~i~~k~--~~~e~~l~~~ 201 (281)
++||+||++.+. .+|++|++. + ++|++|+|. ||++ ..++.++|+++|||+++++... ...++++.+.
T Consensus 22 ~mrIvf~G~~~fa~~~L~~L~~~---~---~~i~~Vvt~-pd~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~ 94 (329)
T 2bw0_A 22 SMKIAVIGQSLFGQEVYCHLRKE---G---HEVVGVFTV-PDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAK 94 (329)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHT---T---CEEEEEEEC-CCCSSCCCHHHHHHHHHTCCEEECSCCEETTEECHHHHHH
T ss_pred CCEEEEEcCcHHHHHHHHHHHHC---C---CeEEEEEeC-CCcCCCCCHHHHHHHHcCCCEEecCcccccccccHHHHHH
Confidence 479999976543 345555542 3 699999995 5543 3578899999999999987321 1123567787
Q ss_pred Hh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCC--Ccce
Q 023530 202 VQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDK--GCLC 260 (281)
Q Consensus 202 L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~--g~~~ 260 (281)
|+ ++|+||+||||+||+++|++.|+++||| ||||+|||+ .|++||+++||+ |||+
T Consensus 95 l~~~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSLLP~yRG~----~pi~~Ai~~G~~~tGvTv 156 (329)
T 2bw0_A 95 YQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGA----SAINWTLIHGDKKGGFSI 156 (329)
T ss_dssp HHTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSCTTTTBSS----CHHHHHHHTTCSEEEEEE
T ss_pred HHhcCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCcCcCCCCc----CHHHHHHHcCCCcEEEEE
Confidence 77 8999999999999999999999999999 999999997 999999999984 5544
No 23
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=99.73 E-value=4.3e-17 Score=155.33 Aligned_cols=160 Identities=11% Similarity=0.064 Sum_probs=113.7
Q ss_pred cccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhccccee
Q 023530 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (281)
Q Consensus 40 ~~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~~~ 119 (281)
..+++||++|+||||||++||++|+++||||+|++|++. +|.|+|+++|++|....+.++|+++|+.++++++|+|..
T Consensus 10 ~~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~--~~~f~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 87 (415)
T 3p96_A 10 KVSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVI--RHRLTLGVLVCCPADVADGPALRHDVEAAIRKVGLDVSI 87 (415)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEE--TTEEEEEEEEEECHHHHTSHHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEE--CCEeEEEEEEEecCCcCCHHHHHHHHHHHHHHcCeEEEE
Confidence 367999999999999999999999999999999999875 789999999999862225689999999999999998542
Q ss_pred eeecC----CCCCeeEEEEeeCC--hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCC
Q 023530 120 VRVPD----IDPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENE 193 (281)
Q Consensus 120 ~~~~~----~~~~~rIavl~Sg~--GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~ 193 (281)
..... +....-+..+.+.. +..+.++...+.+..++.+-..-+++.+ .+++++++--.+.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~------------~~~~~~~v~~~~~~~ 155 (415)
T 3p96_A 88 ERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYP------------VIGLELRVSVPPGAD 155 (415)
T ss_dssp EECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSS------------SEEEEEEEECCTTCH
T ss_pred EECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCC------------ceEEEEEeeCCCCCH
Confidence 21111 11122344444444 6888888888777666665555666531 224555532233322
Q ss_pred h--HHHHHHHHh--CCCEEEEecc
Q 023530 194 R--EEELLELVQ--NTDFLVLARY 213 (281)
Q Consensus 194 ~--e~~l~~~L~--~~DlIVLAgY 213 (281)
. ++++.++.+ ++|++|+..=
T Consensus 156 ~~l~~~l~~l~~~~~vD~~v~~~~ 179 (415)
T 3p96_A 156 EALRTALNRVSSEEHVDVAVEDYT 179 (415)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECS
T ss_pred HHHHHHHHHHhhhcCcCccccccc
Confidence 2 245666666 8999998763
No 24
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=99.59 E-value=9.1e-15 Score=111.15 Aligned_cols=76 Identities=24% Similarity=0.158 Sum_probs=69.8
Q ss_pred cccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcccce
Q 023530 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (281)
Q Consensus 40 ~~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~~ 118 (281)
.+++.|++.|+||||++++||++|+++|+||++++++.. .|.|+|++++++++ ..+.++|.++|++++++++++|.
T Consensus 3 ~~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~--~~~~~~~i~v~~~~-~~~l~~l~~~L~~~~~~~~~~~~ 78 (91)
T 1zpv_A 3 AMKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVL--DEYFTMMAVVSSDE-KQDFTYLRNEFEAFGQTLNVKIN 78 (91)
T ss_dssp CEEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEESS-CCCHHHHHHHHHHHHHHHTEEEE
T ss_pred CceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEE--cCEEEEEEEEEeCC-CCCHHHHHHHHHHHHHHcCCEEE
Confidence 367999999999999999999999999999999999876 38999999999986 67899999999999999999865
No 25
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.56 E-value=5.8e-15 Score=128.43 Aligned_cols=80 Identities=19% Similarity=0.221 Sum_probs=71.6
Q ss_pred CCCcccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccC----CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhh
Q 023530 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE----KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (281)
Q Consensus 37 ~~~~~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~----~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~ 112 (281)
.....+++|+|.|+||||||++||++|+++|+||.+++|++.. ..+.|+|++++..|. ..+ ++|+++|.+++++
T Consensus 88 ~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~~-~~~-~~l~~~l~~~a~~ 165 (195)
T 2nyi_A 88 SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFPF-PLY-QEVVTALSRVEEE 165 (195)
T ss_dssp CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEEG-GGH-HHHHHHHHHHHHH
T ss_pred CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcCC-Ccc-HHHHHHHHHHHHH
Confidence 4445779999999999999999999999999999999999864 457999999999986 566 9999999999999
Q ss_pred hcccce
Q 023530 113 FNAMRS 118 (281)
Q Consensus 113 l~l~~~ 118 (281)
++++|.
T Consensus 166 l~~di~ 171 (195)
T 2nyi_A 166 FGVDID 171 (195)
T ss_dssp HTCEEE
T ss_pred cCeEEE
Confidence 999864
No 26
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.46 E-value=3e-13 Score=116.68 Aligned_cols=81 Identities=16% Similarity=0.142 Sum_probs=71.8
Q ss_pred CCCcccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccC------CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHh
Q 023530 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE------KKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (281)
Q Consensus 37 ~~~~~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~------~~g~F~mrlev~~p~~~~~~~~L~~~L~~la 110 (281)
......++|+|.|+||||||++||++|+++|+||.++++++.. ..+.|+|++++..|+ +.+.++|+++|.+++
T Consensus 88 ~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~~-~~~~~~l~~~l~~~~ 166 (192)
T 1u8s_A 88 QTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDS-GCNLMQLQEEFDALC 166 (192)
T ss_dssp CCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECT-TSCHHHHHHHHHHHH
T ss_pred ccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCCC-CCCHHHHHHHHHHHH
Confidence 3344779999999999999999999999999999999999864 467999999999986 778999999999999
Q ss_pred hhhcccce
Q 023530 111 KMFNAMRS 118 (281)
Q Consensus 111 ~~l~l~~~ 118 (281)
++++++|.
T Consensus 167 ~~~~~~~~ 174 (192)
T 1u8s_A 167 TALDVQGS 174 (192)
T ss_dssp HHHTCEEE
T ss_pred HHhCceEE
Confidence 99999854
No 27
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.44 E-value=1.4e-12 Score=112.49 Aligned_cols=120 Identities=13% Similarity=0.102 Sum_probs=84.5
Q ss_pred ccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcccceee
Q 023530 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (281)
Q Consensus 41 ~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~~~~ 120 (281)
.+++|+|.|+||||||++||++|+++|+||++++|++. .|.|+|++.|..|. ...++|+++|.+++++++++|..-
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~--~~~f~~~~~v~~~~--~~~~~l~~~L~~~~~~~~~~~~~~ 80 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMF--GKEFTLLMLISGSP--SNITRVETTLPLLGQQHDLITMMK 80 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEECH--HHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeec--CCceEEEEEEecCC--CCHHHHHHHHHHHHHhcCCEEEEE
Confidence 36999999999999999999999999999999999874 68999999998774 367899999999999999886422
Q ss_pred eecCC---CCCeeEEEEeeCC--hhHHHHHHHhhhcCCCCeeEEEEEeC
Q 023530 121 RVPDI---DPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISN 164 (281)
Q Consensus 121 ~~~~~---~~~~rIavl~Sg~--GsnL~aLl~~~~~g~l~~eI~~Visn 164 (281)
+.... ....+..+-+++. ..-+.++...+.+..++.+=.-..+.
T Consensus 81 ~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~ 129 (192)
T 1u8s_A 81 RTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTI 129 (192)
T ss_dssp EECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred eCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcc
Confidence 21111 1123334444444 34455565555555444332333443
No 28
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.43 E-value=4.5e-13 Score=116.45 Aligned_cols=93 Identities=12% Similarity=0.078 Sum_probs=73.9
Q ss_pred CcccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCC----HHHHHHHHHHHhhhhc
Q 023530 39 TLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWP----REQMDEDFFKLSKMFN 114 (281)
Q Consensus 39 ~~~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~----~~~L~~~L~~la~~l~ 114 (281)
+.++++|+|+|+||||||++||++|+++|+||++++|++. .|.|+|++.+..+. . + .++|+++|.+++++++
T Consensus 2 ~~~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~--~~~f~m~~~v~~~~-~-~~~~~~~~l~~~L~~~~~~~~ 77 (195)
T 2nyi_A 2 ETQSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACL--GGDFAMIVLVSLNA-K-DGKLIQSALESALPGFQISTR 77 (195)
T ss_dssp CCEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEESS-S-SSHHHHHHHHHHSTTCEEEEE
T ss_pred CceEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEE--CCeEEEEEEEEecC-c-cchhHHHHHHHHHHHHHHhcC
Confidence 3467999999999999999999999999999999999974 78999999998774 2 4 6889999999988888
Q ss_pred ccceeeeecC---CCCCeeEEEEeeCC
Q 023530 115 AMRSVVRVPD---IDPKYKVAVLASKQ 138 (281)
Q Consensus 115 l~~~~~~~~~---~~~~~rIavl~Sg~ 138 (281)
+.|. +.. .....+..+-++|.
T Consensus 78 ~~~~---~~~~~~~~~~~~~iltv~g~ 101 (195)
T 2nyi_A 78 RASS---VAERHVSPDTREYELYVEGP 101 (195)
T ss_dssp ECCC---C----CCTTEEEEEEEEEEE
T ss_pred CeEE---EEeCCcCCCCcEEEEEEEeC
Confidence 7753 221 12234555666655
No 29
>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory FO structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum} SCOP: b.46.1.1 c.65.1.1
Probab=99.22 E-value=2.3e-12 Score=117.50 Aligned_cols=58 Identities=12% Similarity=0.076 Sum_probs=49.6
Q ss_pred HHHHHh--CCCEEEEecccccCChhHHhhhcCCcee---ccCCCCCCCCCCCCchhHHHHhcCCCccee
Q 023530 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLE---SLSSKGSLTSYFNMHMPKHMILTDKGCLCS 261 (281)
Q Consensus 198 l~~~L~--~~DlIVLAgYMrILs~~fl~~~~~riIN---SLLP~f~G~g~~g~~vh~a~l~~d~g~~~~ 261 (281)
+.+.|+ ++|+||+||||+||+++|++.| +||| ||||+|||+ +|+|||+++||+=+.|+
T Consensus 69 ~~~~L~~~~pDliv~~~y~~ilp~~il~~~--g~iNiHpSLLP~yRG~----~pi~~Ai~~G~~~tGvT 131 (260)
T 1zgh_A 69 TFEKVKLINPEYILFPHWSWIIPKEIFENF--TCVVFHMTDLPFGRGG----SPLQNLIERGIKKTKIS 131 (260)
T ss_dssp CHHHHHHHCCSEEEESSCCSCCCHHHHTTS--CEEEEESSCTTTTEES----CHHHHHHHTTCCEEEEE
T ss_pred HHHHHHhcCCCEEEEeccccccCHHHHccC--CEEEEeCCcCCCCCCc----CHHHHHHHcCCCcEEEE
Confidence 445555 9999999999999999999984 5999 999999997 99999999998544444
No 30
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.44 E-value=2.7e-07 Score=68.52 Aligned_cols=64 Identities=13% Similarity=0.092 Sum_probs=49.9
Q ss_pred ccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHh
Q 023530 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (281)
Q Consensus 41 ~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la 110 (281)
.++.|++.++||||++++|++.|+++|+||.++.+... .+.+.+.+.++.++ .+.+++.++++.
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~--~~~~~~~i~v~~~~----~~~l~~l~~~L~ 67 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAK--DGIFTCNLMIFVKN----TDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEEC--SSEEEEEEEEEESS----HHHHHHHHHHHT
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEc--CCEEEEEEEEEECC----HHHHHHHHHHHh
Confidence 56889999999999999999999999999999998653 23666777777764 445555555544
No 31
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.11 E-value=2.4e-05 Score=74.02 Aligned_cols=93 Identities=11% Similarity=-0.034 Sum_probs=72.9
Q ss_pred CCcccEEEEEEcCC-CcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhccc
Q 023530 38 PTLTHGIHVFHCPD-EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (281)
Q Consensus 38 ~~~~~~iltV~G~D-rpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~ 116 (281)
+...++++++.|.| ++|++++|+.+++++|+||.++..... ...|.+.+.+.+|+ .+.++++++|.++++++++|
T Consensus 97 ~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~--~~~~~~~~~v~~~~--~~~~~l~~~l~~l~~~~~vD 172 (415)
T 3p96_A 97 REPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSD--YPVIGLELRVSVPP--GADEALRTALNRVSSEEHVD 172 (415)
T ss_dssp CCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEES--SSSEEEEEEEECCT--TCHHHHHHHHHHHHHHHTCE
T ss_pred CCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccC--CCceEEEEEeeCCC--CCHHHHHHHHHHHhhhcCcC
Confidence 34568999999999 999999999999999999999988653 34555556666664 57899999999999999998
Q ss_pred ceeeeecCCCCCeeEEEE
Q 023530 117 RSVVRVPDIDPKYKVAVL 134 (281)
Q Consensus 117 ~~~~~~~~~~~~~rIavl 134 (281)
....+-....+++|.++|
T Consensus 173 ~~v~~~~~~~~~~k~viF 190 (415)
T 3p96_A 173 VAVEDYTLERRAKRLIVF 190 (415)
T ss_dssp EEEEECSTTTTCCCEEEE
T ss_pred cccccccccccCCcEEEE
Confidence 653322223567787776
No 32
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.68 E-value=6.7e-05 Score=63.71 Aligned_cols=68 Identities=19% Similarity=0.197 Sum_probs=50.6
Q ss_pred ccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHh
Q 023530 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (281)
Q Consensus 41 ~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la 110 (281)
+.+.|++...|+||++++|++.|+++|+||..+........|...|.+.++-+ ....+++.+.+.++-
T Consensus 2 ~~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~d--~~~leqI~kqL~Kl~ 69 (164)
T 2f1f_A 2 ARRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGD--EKVLEQIEKQLHKLV 69 (164)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESC--HHHHHHHHHHHHHST
T ss_pred eEEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEecc--HHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999998654344666666666621 223455555555543
No 33
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.40 E-value=0.00025 Score=60.29 Aligned_cols=68 Identities=19% Similarity=0.114 Sum_probs=51.1
Q ss_pred ccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHh
Q 023530 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (281)
Q Consensus 41 ~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la 110 (281)
+++.|++...|+||.+++|++.|+++|+||..+........|...|.+.++-+ ....+++.+.+.++-
T Consensus 3 m~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d--~~~leql~kQL~Kl~ 70 (165)
T 2pc6_A 3 MRHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGP--DEIVEQITKQLNKLI 70 (165)
T ss_dssp EEEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEEC--HHHHHHHHHHHHHST
T ss_pred eEEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEecc--HHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999988654445665666666532 223556666666554
No 34
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=97.40 E-value=0.00044 Score=60.16 Aligned_cols=70 Identities=20% Similarity=0.186 Sum_probs=53.9
Q ss_pred cccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhh
Q 023530 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (281)
Q Consensus 40 ~~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~ 111 (281)
.+++.|++.-.|+||.+++|++.|+++|+||..+...-....|.-.|.+.++-+ ....++|.+++.++-+
T Consensus 27 ~m~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~--e~~ieqL~kQL~KLid 96 (193)
T 2fgc_A 27 IREHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD--DKTIEQIEKQAYKLVE 96 (193)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC--TTHHHHHHHHHTTSTT
T ss_pred ceEEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC--HHHHHHHHHHhcCcCc
Confidence 468999999999999999999999999999999988643344655555566543 2356777777776543
No 35
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=97.39 E-value=0.0002 Score=63.39 Aligned_cols=90 Identities=17% Similarity=0.201 Sum_probs=58.6
Q ss_pred ccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccC--C-CCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcccc
Q 023530 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE--K-KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (281)
Q Consensus 41 ~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~--~-~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~ 117 (281)
+++.|.+.+.||||++++|++.|+++++||..++++... . .+...|. +++.+ . +.+++-+.++.+-.=+.+.
T Consensus 3 ~~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~--IEV~d-~-~Le~LL~kLrkI~gV~~V~- 77 (223)
T 1y7p_A 3 MLRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIY--FEIEG-G-DFEKILERVKTFDYIIEIE- 77 (223)
T ss_dssp -CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEE--EEECS-S-CHHHHHHHHHTCTTEEEEE-
T ss_pred ceEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEE--EEECC-C-CHHHHHHHHhCCCCeeEEE-
Confidence 578899999999999999999999999999999998742 1 3566666 66554 3 6777777776654332221
Q ss_pred eeeeecCCC--CCeeEEEEeeCC
Q 023530 118 SVVRVPDID--PKYKVAVLASKQ 138 (281)
Q Consensus 118 ~~~~~~~~~--~~~rIavl~Sg~ 138 (281)
++.... --+||.|++-|.
T Consensus 78 ---Rv~~~~~i~gkrvii~ggga 97 (223)
T 1y7p_A 78 ---EEESFERVFGKRVIILGGGA 97 (223)
T ss_dssp ---EECCHHHHTCEEEEEEECHH
T ss_pred ---EEcchhhhcCcEEEEECCcH
Confidence 111111 137888887664
No 36
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=97.33 E-value=0.01 Score=47.88 Aligned_cols=62 Identities=10% Similarity=0.066 Sum_probs=45.7
Q ss_pred CcccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHH
Q 023530 39 TLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108 (281)
Q Consensus 39 ~~~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~ 108 (281)
..+.+.++|..+|+||++++|++.|+++|+||..+.+......| +.++.+ . +.+..++.|++
T Consensus 3 ~m~~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~--~~~~~~--~----d~~~a~~~L~~ 64 (144)
T 2f06_A 3 AMVAKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFG--ILRGIV--S----DPDKAYKALKD 64 (144)
T ss_dssp SSEEEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCE--EEEEEE--S----CHHHHHHHHHH
T ss_pred ccEEEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCC--EEEEEe--C----CHHHHHHHHHH
Confidence 34678999999999999999999999999999999886422223 234442 2 45666666664
No 37
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.20 E-value=0.001 Score=55.74 Aligned_cols=93 Identities=12% Similarity=-0.032 Sum_probs=63.7
Q ss_pred CCCCcccEEEEEEc-CCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhc
Q 023530 36 VSPTLTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (281)
Q Consensus 36 ~~~~~~~~iltV~G-~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~ 114 (281)
-+.......|++.| +|+||+.++|.+.|+++|+||..+.|...+ .|.+.+++.++- .+.+...+.|+++.++++
T Consensus 19 Ia~~~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~-~g~~~isf~v~~----~~~~~a~~~l~~~~~~l~ 93 (167)
T 2re1_A 19 IAFDKNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGS-EGTTDFSFTVPR----GDYKQTLEILSERQDSIG 93 (167)
T ss_dssp EEEECCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC-----CEEEEEEEECG----GGHHHHHHHHHHSSTTTT
T ss_pred EEecCCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCC-CCeeEEEEEEec----hHHHHHHHHHHHHHHHcC
Confidence 33334557889987 999999999999999999999999986433 255555555542 245667788888877777
Q ss_pred ccceeeeecCCCCCeeEEEEeeC
Q 023530 115 AMRSVVRVPDIDPKYKVAVLASK 137 (281)
Q Consensus 115 l~~~~~~~~~~~~~~rIavl~Sg 137 (281)
... +.. .....+|.|.+.|
T Consensus 94 ~~~--i~~--~~~~a~vsvvG~~ 112 (167)
T 2re1_A 94 AAS--IDG--DDTVCKVSAVGLG 112 (167)
T ss_dssp CSE--EEE--ESSEEEEEEECSS
T ss_pred Cce--EEe--cCCEEEEEEECCC
Confidence 532 222 2345678888877
No 38
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.91 E-value=0.011 Score=49.28 Aligned_cols=89 Identities=18% Similarity=0.054 Sum_probs=64.3
Q ss_pred cccEEEEEEc-CCCcchHHHHHHHHHhCCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcccc
Q 023530 40 LTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (281)
Q Consensus 40 ~~~~iltV~G-~DrpGIVa~VS~~La~~giNI~dl~q~~~~-~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~ 117 (281)
.....|++.| +|+||+.+++.+.|+++|+||.-+.|...+ ..|...+.+.+.- .+.+...+.|+++..+++.
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~----~d~~~a~~~L~~~~~~~~~-- 87 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKK----DFAQEALEALEPVLAEIGG-- 87 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEG----GGHHHHHHHHHHHHHHHCC--
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEeh----HHHHHHHHHHHHHHHHhCC--
Confidence 3557788888 899999999999999999999999985421 2345454555542 2456677888888888874
Q ss_pred eeeeecCCCCCeeEEEEeeC
Q 023530 118 SVVRVPDIDPKYKVAVLASK 137 (281)
Q Consensus 118 ~~~~~~~~~~~~rIavl~Sg 137 (281)
.+.+ ....-+|.+.+.|
T Consensus 88 -~v~~--~~~~a~vsvVG~g 104 (167)
T 2dt9_A 88 -EAIL--RPDIAKVSIVGVG 104 (167)
T ss_dssp -EEEE--ECSEEEEEEEESS
T ss_pred -cEEE--eCCEEEEEEECCC
Confidence 2333 3446689999987
No 39
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.78 E-value=0.0021 Score=52.66 Aligned_cols=34 Identities=18% Similarity=0.339 Sum_probs=31.7
Q ss_pred EEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeec
Q 023530 44 IHVFHCPDEVGIVAKLSECIASRGGNILAADVFV 77 (281)
Q Consensus 44 iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~ 77 (281)
.|.|.|.||+|++++|++.|+++++||..++...
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~ 35 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDP 35 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEET
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEec
Confidence 4789999999999999999999999999999854
No 40
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.25 E-value=0.013 Score=57.66 Aligned_cols=65 Identities=15% Similarity=0.076 Sum_probs=49.8
Q ss_pred ccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHH
Q 023530 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKL 109 (281)
Q Consensus 41 ~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~l 109 (281)
..+.|.+.-+|+||+|+.|++.|.++|+||.+++-......|.=.|.++++-+. .+++.+++.++
T Consensus 453 ~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~~----~~~~l~~l~~~ 517 (529)
T 1ygy_A 453 QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDV----PDDVRTAIAAA 517 (529)
T ss_dssp CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSCC----CHHHHHHHHHH
T ss_pred CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCCC----CHHHHHHHhcC
Confidence 457888889999999999999999999999999876544456667778777443 34455555554
No 41
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.15 E-value=0.021 Score=54.56 Aligned_cols=76 Identities=16% Similarity=0.258 Sum_probs=52.0
Q ss_pred hhhhheeecc--cccccCCCCccCCCCCCCCcccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEE
Q 023530 11 LQQVVKFTNR--SFKSLKFPGEPIESSVSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRS 88 (281)
Q Consensus 11 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrl 88 (281)
.+++..|.+. .-..+.||...+.. .....|.+.-.|+||+++.|++.|+++|+||..+.... ..+.=.|.+
T Consensus 303 ~~nl~~~l~g~~~~~~vn~p~~~~~~-----~~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r--~g~~A~~vi 375 (404)
T 1sc6_A 303 AGKLIKYSDNGSTLSAVNFPEVSLPL-----HGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT--SAQMGYVVI 375 (404)
T ss_dssp HHHHHHHHHHCCCTTBSSSCCCCCCC-----CSSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE--CSSEEEEEE
T ss_pred HHHHHHHHcCCCCcceecccccccCc-----CCcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC--CCCEEEEEE
Confidence 3455555431 23345666544321 14567888899999999999999999999999988765 245556677
Q ss_pred EEEeC
Q 023530 89 EFIFD 93 (281)
Q Consensus 89 ev~~p 93 (281)
+++-+
T Consensus 376 dvD~~ 380 (404)
T 1sc6_A 376 DIEAD 380 (404)
T ss_dssp EEECC
T ss_pred EcCCC
Confidence 77743
No 42
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=96.09 E-value=0.009 Score=51.99 Aligned_cols=98 Identities=16% Similarity=0.030 Sum_probs=68.6
Q ss_pred CCCCCCcccEEEEEEc-CCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhh
Q 023530 34 SSVSPTLTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (281)
Q Consensus 34 ~~~~~~~~~~iltV~G-~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~ 112 (281)
+.-+-......||+.| ||+||+.++|=+.|+++|+||.-+.|..... ......+.+.++. .+.+...+.++++..+
T Consensus 27 tGIa~~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~-~~~~~~~sftv~~--~d~~~~~~~l~~~~~~ 103 (200)
T 4go7_X 27 TGVAHDRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKV-EDGKTDITFTCSR--DVGPAAVEKLDSLRNE 103 (200)
T ss_dssp EEEEEECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC---CCEEEEEEEEEG--GGHHHHHHHHHTTHHH
T ss_pred EEEEccCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccc-cccceEEEEecch--hhHHHHHHHHHHHHhh
Confidence 3333444556788876 8999999999999999999999998865321 2234456666664 3567777888888888
Q ss_pred hcccceeeeecCCCCCeeEEEEeeCC
Q 023530 113 FNAMRSVVRVPDIDPKYKVAVLASKQ 138 (281)
Q Consensus 113 l~l~~~~~~~~~~~~~~rIavl~Sg~ 138 (281)
++... +.. ...--||.+.+.|-
T Consensus 104 ~~~~~--v~~--~~~iakVSvVG~GM 125 (200)
T 4go7_X 104 IGFSQ--LLY--DDHIGKVSLIGAGM 125 (200)
T ss_dssp HCCSE--EEE--ECCEEEEEEEEESC
T ss_pred hceee--EEE--ecCeeeeeeecccc
Confidence 77542 222 34456899988886
No 43
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=95.99 E-value=0.022 Score=45.87 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=29.2
Q ss_pred EEEEEcCCCcchHHHHHHHHHhCCCeEeEeeee
Q 023530 44 IHVFHCPDEVGIVAKLSECIASRGGNILAADVF 76 (281)
Q Consensus 44 iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~ 76 (281)
++.+.-+|+||.++++++.|+++|+||..+-++
T Consensus 74 vv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~ 106 (144)
T 2f06_A 74 VVGISCPNVPGALAKVLGFLSAEGVFIEYMYSF 106 (144)
T ss_dssp EEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEE
Confidence 566677899999999999999999999887765
No 44
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=95.16 E-value=0.15 Score=43.24 Aligned_cols=90 Identities=17% Similarity=0.030 Sum_probs=61.7
Q ss_pred ccEEEEEEc-CCCcchHHHHHHHHHhCCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcccce
Q 023530 41 THGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (281)
Q Consensus 41 ~~~iltV~G-~DrpGIVa~VS~~La~~giNI~dl~q~~~~-~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~~ 118 (281)
....|++.+ +|+||+.++|-+.|+++|+||.-+.|.... ..|.-. +.+.++. .+.+...+.|+++.++++..
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~--isftv~~--~~~~~a~~~L~~~~~el~~~-- 88 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTD--ITFTCSR--DVGPAAVEKLDSLRNEIGFS-- 88 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEE--EEEEEET--TTHHHHHHHHHHTHHHHCCS--
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccE--EEEEEeh--hHHHHHHHHHHHHHHhcCcc--
Confidence 344566544 699999999999999999999999886432 145433 3444443 25667788888888777654
Q ss_pred eeeecCCCCCeeEEEEeeCC
Q 023530 119 VVRVPDIDPKYKVAVLASKQ 138 (281)
Q Consensus 119 ~~~~~~~~~~~rIavl~Sg~ 138 (281)
.+.+ ...--+|.+.+.|-
T Consensus 89 ~v~~--~~~va~VsvVG~gm 106 (181)
T 3s1t_A 89 QLLY--DDHIGKVSLIGAGM 106 (181)
T ss_dssp EEEE--ESCEEEEEEEEECC
T ss_pred eEEE--eCCEEEEEEEeccc
Confidence 2332 23456888888864
No 45
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=94.86 E-value=0.21 Score=41.93 Aligned_cols=107 Identities=17% Similarity=0.042 Sum_probs=65.8
Q ss_pred ccEEEEEE-cCCCcchHHHHHHHHHhCCCeEeEeeeecc-CCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcccce
Q 023530 41 THGIHVFH-CPDEVGIVAKLSECIASRGGNILAADVFVP-EKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (281)
Q Consensus 41 ~~~iltV~-G~DrpGIVa~VS~~La~~giNI~dl~q~~~-~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~~ 118 (281)
....|+|. .+|+||+.++|.+.|+++|+||.-+.|.+. +..|.- .+.+.++. .+.+...+.|+++.++++..
T Consensus 14 ~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~--~isf~v~~--~d~~~a~~~l~~~~~~~~~~-- 87 (178)
T 2dtj_A 14 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTT--DITFTCPR--SDGRRAMEILKKLQVQGNWT-- 87 (178)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEE--EEEEEEEH--HHHHHHHHHHHTTTTTTTCS--
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCce--EEEEEEcc--ccHHHHHHHHHHHHHhcCCC--
Confidence 44566774 589999999999999999999999988642 122221 12233332 13455667777776677643
Q ss_pred eeeecCCCCCeeEEEEeeCCh---hHHHHHHHhhhcCCCC
Q 023530 119 VVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEGKLP 155 (281)
Q Consensus 119 ~~~~~~~~~~~rIavl~Sg~G---snL~aLl~~~~~g~l~ 155 (281)
.+.+ ....-+|.+.++|-. .-+..++.+..+..++
T Consensus 88 ~v~~--~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~In 125 (178)
T 2dtj_A 88 NVLY--DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVN 125 (178)
T ss_dssp EEEE--ESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred eEEE--eCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCC
Confidence 2222 344668888888652 2233455554444433
No 46
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.60 E-value=0.022 Score=53.65 Aligned_cols=55 Identities=16% Similarity=0.324 Sum_probs=35.5
Q ss_pred CCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEE
Q 023530 124 DIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 185 (281)
Q Consensus 124 ~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~ 185 (281)
.+++|+||+|.++|-|.. -+.++.+-.-.+++++|++.. ...+.++|+++|||++
T Consensus 3 ~~~~~~rv~VvG~G~g~~---h~~a~~~~~~~~elvav~~~~----~~~a~~~a~~~gv~~~ 57 (372)
T 4gmf_A 3 SASPKQRVLIVGAKFGEM---YLNAFMQPPEGLELVGLLAQG----SARSRELAHAFGIPLY 57 (372)
T ss_dssp ----CEEEEEECSTTTHH---HHHTTSSCCTTEEEEEEECCS----SHHHHHHHHHTTCCEE
T ss_pred CCCCCCEEEEEehHHHHH---HHHHHHhCCCCeEEEEEECCC----HHHHHHHHHHhCCCEE
Confidence 356789999999997743 233332211137899988754 3457889999999964
No 47
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=94.07 E-value=0.14 Score=45.53 Aligned_cols=105 Identities=12% Similarity=0.061 Sum_probs=60.8
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCC---------ChhHHHHHHhCCCCEEEeCCCCC-C-hH
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGP---------NSHVIRFLERHGIPYHYLCAKEN-E-RE 195 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~---------~a~~~~~A~~~gIP~~~i~~k~~-~-~e 195 (281)
.||++++.||+ +|++. +....+.| .+|.++++..+... -..+...|+..|||+++++.+.. . ..
T Consensus 4 ~MKvvvl~SGGkDSs~a-l~~l~~~G---~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~ 79 (237)
T 3rjz_A 4 LADVAVLYSGGKDSNYA-LYWAIKNR---FSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEV 79 (237)
T ss_dssp CSEEEEECCSSHHHHHH-HHHHHHTT---CEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CH
T ss_pred CCEEEEEecCcHHHHHH-HHHHHHcC---CeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHH
Confidence 36999999998 46554 44444556 58887765443211 13467789999999999883221 1 22
Q ss_pred HHHHHHHh--CCCEEEEecccccCChhHHhhhcCCc--ee--ccCCCCCC
Q 023530 196 EELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKL--LE--SLSSKGSL 239 (281)
Q Consensus 196 ~~l~~~L~--~~DlIVLAgYMrILs~~fl~~~~~ri--IN--SLLP~f~G 239 (281)
+.+.+.|+ +++.+|. .-|+++.--.+-++.| +| ++.|.|+=
T Consensus 80 e~l~~~l~~~~i~~vv~---Gdi~s~yqr~r~e~vc~~~gl~~~~PLW~~ 126 (237)
T 3rjz_A 80 EDLKRVLSGLKIQGIVA---GALASKYQRKRIEKVAKELGLEVYTPAWGR 126 (237)
T ss_dssp HHHHHHHTTSCCSEEEC---C---CCSHHHHHHHHHHHTTCEEECSSSSC
T ss_pred HHHHHHHHhcCCcEEEE---CCcchHHHHHHHHHHHHHcCCEEEccccCC
Confidence 56777777 6777763 3344444333322222 23 78888754
No 48
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.43 E-value=0.19 Score=48.58 Aligned_cols=71 Identities=13% Similarity=0.059 Sum_probs=50.1
Q ss_pred CCCcccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhh
Q 023530 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (281)
Q Consensus 37 ~~~~~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~-~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~ 111 (281)
.....+|-+.+...|+||++++|++.|+++|++|..+-|.-.. ..+. ..+.+-. . .....+++++++++.+
T Consensus 354 ~~~~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~--~~~v~~t-h-~~~e~~~~~~~~~~~~ 425 (444)
T 3mtj_A 354 EAVRTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQ--VDIILLT-H-VTLEKNVNAAIAKIEA 425 (444)
T ss_dssp GGCEEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------C--EEEEEEE-C-SEEHHHHHHHHHHHTT
T ss_pred HHcceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCC--ceEEEEe-c-cCCHHHHHHHHHHHhc
Confidence 3445789999999999999999999999999999999986321 1111 2333322 2 4567888888888764
No 49
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=93.32 E-value=0.23 Score=41.16 Aligned_cols=62 Identities=23% Similarity=0.131 Sum_probs=45.3
Q ss_pred ccEEEEEEcCC---CcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcc
Q 023530 41 THGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (281)
Q Consensus 41 ~~~iltV~G~D---rpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l 115 (281)
.-..++|+|.+ +||+.+++.+.|+++|+||..+++ +.. .+.+.++ .++..++++.+.++|.+
T Consensus 102 ~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ist-----se~-~is~vv~-------~~d~~~av~~Lh~~f~l 166 (167)
T 2re1_A 102 TVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIST-----SEI-KVSVLID-------EKYMELATRVLHKAFNL 166 (167)
T ss_dssp SEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEEE-----CSS-EEEEEEE-------GGGHHHHHHHHHHHTTC
T ss_pred CEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEEc-----ccC-EEEEEEe-------HHHHHHHHHHHHHHhcC
Confidence 45789999997 999999999999999999998763 111 1222232 24466777777777754
No 50
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=92.61 E-value=0.29 Score=44.46 Aligned_cols=69 Identities=9% Similarity=0.209 Sum_probs=44.6
Q ss_pred CCCCeeEEEEeeCC-hh--HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH
Q 023530 125 IDPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (281)
Q Consensus 125 ~~~~~rIavl~Sg~-Gs--nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~ 201 (281)
...|+||+|.+.|. |. -+.++ .. .+ .++|++|.+-. ...+.+.|+++|+|..+- + +.++
T Consensus 20 ~~~mirigiIG~G~ig~~~~~~~~-~~--~~--~~~lvav~d~~----~~~a~~~a~~~g~~~~y~-----d----~~el 81 (350)
T 4had_A 20 FQSMLRFGIISTAKIGRDNVVPAI-QD--AE--NCVVTAIASRD----LTRAREMADRFSVPHAFG-----S----YEEM 81 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHH-HH--CS--SEEEEEEECSS----HHHHHHHHHHHTCSEEES-----S----HHHH
T ss_pred ccCccEEEEEcChHHHHHHHHHHH-Hh--CC--CeEEEEEECCC----HHHHHHHHHHcCCCeeeC-----C----HHHH
Confidence 45689999999997 32 23333 32 12 37888876643 345788999999996552 2 2255
Q ss_pred Hh--CCCEEEEe
Q 023530 202 VQ--NTDFLVLA 211 (281)
Q Consensus 202 L~--~~DlIVLA 211 (281)
|+ ++|+|++|
T Consensus 82 l~~~~iDaV~I~ 93 (350)
T 4had_A 82 LASDVIDAVYIP 93 (350)
T ss_dssp HHCSSCSEEEEC
T ss_pred hcCCCCCEEEEe
Confidence 55 68888886
No 51
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=91.76 E-value=0.95 Score=42.98 Aligned_cols=88 Identities=18% Similarity=-0.061 Sum_probs=60.2
Q ss_pred EEEEEEc-CCCcchHHHHHHHHHhCCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcccceee
Q 023530 43 GIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (281)
Q Consensus 43 ~iltV~G-~DrpGIVa~VS~~La~~giNI~dl~q~~~~-~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~~~~ 120 (281)
..|++.+ +|+||+.++|-+.|+++|+||.-+.|.+.. ..|...+.+.++ . .+.+...+.|+++..+++.+ .+
T Consensus 265 ~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~--~--~~~~~a~~~l~~~~~~~~~~--~v 338 (421)
T 3ab4_A 265 AKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCP--R--SDGRRAMEILKKLQVQGNWT--NV 338 (421)
T ss_dssp EEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEE--T--TTHHHHHHHHHHHHTTTTCS--EE
T ss_pred EEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEe--c--hhHHHHHHHHHHHHHHcCCc--eE
Confidence 4567774 899999999999999999999999884321 134444444444 3 25666778888888888753 23
Q ss_pred eecCCCCCeeEEEEeeCC
Q 023530 121 RVPDIDPKYKVAVLASKQ 138 (281)
Q Consensus 121 ~~~~~~~~~rIavl~Sg~ 138 (281)
.+ ....-+|.|.+.|-
T Consensus 339 ~~--~~~~a~vsvVG~gm 354 (421)
T 3ab4_A 339 LY--DDQVGKVSLVGAGM 354 (421)
T ss_dssp EE--ECCEEEEEEECGGG
T ss_pred EE--eCCeEEEEEEccCc
Confidence 33 24456788888753
No 52
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=91.63 E-value=0.25 Score=41.47 Aligned_cols=63 Identities=14% Similarity=0.171 Sum_probs=47.4
Q ss_pred ccEEEEEEcC---CCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhccc
Q 023530 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (281)
Q Consensus 41 ~~~iltV~G~---DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~ 116 (281)
.-..|+++|. |+||+.+++.+.|+++|+||.-+++. .... .+-++ .++.+++++.+-+.|.++
T Consensus 94 ~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~istS---e~~I-----s~vV~-----~~d~~~Av~~Lh~~F~l~ 159 (178)
T 2dtj_A 94 QVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTS---EIRI-----SVLIR-----EDDLDAAARALHEQFQLG 159 (178)
T ss_dssp CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEEE---TTEE-----EEEEE-----GGGHHHHHHHHHHHHTCC
T ss_pred CeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEEcC---CCeE-----EEEEe-----HHHHHHHHHHHHHHHccC
Confidence 5578999998 89999999999999999999887631 1222 22222 456788888888888764
No 53
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=91.52 E-value=0.47 Score=45.49 Aligned_cols=64 Identities=16% Similarity=0.242 Sum_probs=46.0
Q ss_pred hhhhheee-c-ccccccCCCCccCCCCCCCCcccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeecc
Q 023530 11 LQQVVKFT-N-RSFKSLKFPGEPIESSVSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVP 78 (281)
Q Consensus 11 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~ 78 (281)
.+++..|. + ..-.+..||-.-. +.......|++.=.+.||+++.|++.|+++|+||.++...+.
T Consensus 314 ~~nl~~~l~~g~~~~~Vn~p~~~~----~~~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~ 379 (416)
T 3k5p_A 314 TRKLVEYSDVGSTVGAVNFPQVQL----PPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTD 379 (416)
T ss_dssp HHHHHHHHHHCCCTTBSSSCCCCC----CCCSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred HHHHHHHHhhCCCCceeeCCCcCC----CCCCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCC
Confidence 34555554 2 2334566765332 233356899999999999999999999999999999877653
No 54
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=91.23 E-value=0.73 Score=37.95 Aligned_cols=63 Identities=16% Similarity=0.084 Sum_probs=44.2
Q ss_pred ccEEEEEEcCC---CcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhccc
Q 023530 41 THGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (281)
Q Consensus 41 ~~~iltV~G~D---rpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~ 116 (281)
.-..++++|.+ +||+.+++.+.|++.|+||.-.++ +.. .+.+.++ .++..++++.+-+.+.++
T Consensus 94 ~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~-----Se~-~is~vv~-------~~d~~~Av~~Lh~~f~~~ 159 (167)
T 2dt9_A 94 DIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIAT-----SEV-RISVIIP-------AEYAEAALRAVHQAFELD 159 (167)
T ss_dssp SEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEEE-----CSS-EEEEEEE-------GGGHHHHHHHHHHHTC--
T ss_pred CEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEEc-----cCC-EEEEEEe-------HHHHHHHHHHHHHHHcCC
Confidence 55789999987 999999999999999999966653 222 2233333 345677777777776554
No 55
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=90.81 E-value=0.57 Score=42.60 Aligned_cols=70 Identities=7% Similarity=0.162 Sum_probs=42.5
Q ss_pred CCeeEEEEeeCC-hhH-HHHH---HHhhhcCCC-CeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHH
Q 023530 127 PKYKVAVLASKQ-EHC-LVDF---LYGWQEGKL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLE 200 (281)
Q Consensus 127 ~~~rIavl~Sg~-Gsn-L~aL---l~~~~~g~l-~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~ 200 (281)
+|.||||.+.|. |.. +.++ -... ... .++|++|..-.+ ..+.+.|+++|+|..+- + +.+
T Consensus 24 kkirvgiIG~G~ig~~H~~a~~~~~~~~--~~~~~~~lvav~d~~~----~~a~~~a~~~g~~~~y~-----d----~~e 88 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAWNAVKTVF--GDVERPRLVHLAEANA----GLAEARAGEFGFEKATA-----D----WRA 88 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTHHHHH--CSSCCCEEEEEECC------TTHHHHHHHHTCSEEES-----C----HHH
T ss_pred CCccEEEEcCCHHHHHHHHHHHhhhhhh--ccCCCcEEEEEECCCH----HHHHHHHHHhCCCeecC-----C----HHH
Confidence 357999999987 321 2222 1111 111 378998876543 34678999999986552 2 225
Q ss_pred HHh--CCCEEEEe
Q 023530 201 LVQ--NTDFLVLA 211 (281)
Q Consensus 201 ~L~--~~DlIVLA 211 (281)
+|+ ++|+|+.|
T Consensus 89 ll~~~~iDaV~Ia 101 (393)
T 4fb5_A 89 LIADPEVDVVSVT 101 (393)
T ss_dssp HHHCTTCCEEEEC
T ss_pred HhcCCCCcEEEEC
Confidence 555 78888886
No 56
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=90.57 E-value=0.32 Score=48.67 Aligned_cols=93 Identities=15% Similarity=0.082 Sum_probs=63.3
Q ss_pred cccEEEEEEc-CCCcchHHHHHHHHHhCCCeEeEeeeeccCC--CCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhccc
Q 023530 40 LTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEK--KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (281)
Q Consensus 40 ~~~~iltV~G-~DrpGIVa~VS~~La~~giNI~dl~q~~~~~--~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~ 116 (281)
.....|++.+ +|+||+.++|=+.|+++|+|+.=+.|..... +|.+...+.|.++. .+.+...+.|+++.++++..
T Consensus 442 ~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~--~d~~~a~~~l~~~~~~~~~~ 519 (600)
T 3l76_A 442 QDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE--GDSSQAEAILQPLIKDWLDA 519 (600)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH--HHHHHHHHHHHHHTTTSTTC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH--HHHHHHHHHHHHHHHhcCCc
Confidence 3456677755 8999999999999999999998888865321 35443455566653 24566677777777777643
Q ss_pred ceeeeecCCCCCeeEEEEeeCC
Q 023530 117 RSVVRVPDIDPKYKVAVLASKQ 138 (281)
Q Consensus 117 ~~~~~~~~~~~~~rIavl~Sg~ 138 (281)
. +.+ ...--||.+.+.|-
T Consensus 520 ~--v~~--~~~~akVSiVG~GM 537 (600)
T 3l76_A 520 A--IVV--NKAIAKVSIVGSGM 537 (600)
T ss_dssp E--EEE--ECCEEEEEEECGGG
T ss_pred e--EEE--eCCeEEEEEECccc
Confidence 2 222 24456888887664
No 57
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=90.42 E-value=0.99 Score=40.73 Aligned_cols=65 Identities=12% Similarity=0.098 Sum_probs=44.1
Q ss_pred ccEEEEEE-cCCCcchHHHHHHHHHhCCCeEeEeeeeccC-CCC--eEEEEEEEEeCCCCCCHHHHHHHHHHHhh
Q 023530 41 THGIHVFH-CPDEVGIVAKLSECIASRGGNILAADVFVPE-KKN--VFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (281)
Q Consensus 41 ~~~iltV~-G~DrpGIVa~VS~~La~~giNI~dl~q~~~~-~~g--~F~mrlev~~p~~~~~~~~L~~~L~~la~ 111 (281)
+.+++++. -+|+||-.+++-+.|+.+|+|+..+++.=.. ..+ .||+.++ .. +-+.++++|+++..
T Consensus 187 tsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e-~~-----~d~~v~~aL~~L~~ 255 (267)
T 2qmw_A 187 TSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQAD-SA-----ITTDIKKVIAILET 255 (267)
T ss_dssp SEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEES-CC-----SCHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEe-cC-----CcHHHHHHHHHHHH
Confidence 34444432 2799999999999999999999999986422 122 5554443 21 23667888877754
No 58
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=89.85 E-value=0.82 Score=43.33 Aligned_cols=76 Identities=11% Similarity=0.152 Sum_probs=52.0
Q ss_pred eeEEEEee-CC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCC-CCCC--------hHHH
Q 023530 129 YKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA-KENE--------REEE 197 (281)
Q Consensus 129 ~rIavl~S-g~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~-k~~~--------~e~~ 197 (281)
+||+||+| |+ |++--+++.+. . .++++++.+++ .-....+.|++++..++.+.. .... -++.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~--~--~~~vvaL~a~~---n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~~~ 76 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKV--K--GIRLIGISFHS---NLELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHS 76 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS--C--SEEEEEEEESS---CHHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEESTTH
T ss_pred ceEEEECCCCHHHHHHHHHHHhC--C--CeEEEEEEccC---CHHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCHHH
Confidence 78999996 66 66655666653 2 37999988765 234577889999988887652 1111 1245
Q ss_pred HHHHHh--CCCEEEEe
Q 023530 198 LLELVQ--NTDFLVLA 211 (281)
Q Consensus 198 l~~~L~--~~DlIVLA 211 (281)
+.+++. ++|+|+.|
T Consensus 77 l~el~~~~~~D~Vv~A 92 (376)
T 3a06_A 77 IEEMLEALKPDITMVA 92 (376)
T ss_dssp HHHHHHHHCCSEEEEC
T ss_pred HHHHhcCCCCCEEEEE
Confidence 667776 79999987
No 59
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=89.32 E-value=0.64 Score=40.20 Aligned_cols=63 Identities=19% Similarity=0.273 Sum_probs=48.8
Q ss_pred ccEEEEEEcC---CCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhccc
Q 023530 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (281)
Q Consensus 41 ~~~iltV~G~---DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~ 116 (281)
.-..++++|. .+||+-+++-+.|++.|+||.-+++ +.. .+.+-++ .++..++++.+-+.|+|+
T Consensus 114 ~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIst-----SEi---~IS~vV~-----~~d~~~Av~aLH~~F~L~ 179 (200)
T 4go7_X 114 HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIST-----SEI---RISVLCR-----DTELDKAVVALHEAFGLG 179 (200)
T ss_dssp CEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEEE-----CSS---EEEEEEE-----GGGHHHHHHHHHHHHTC-
T ss_pred CeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEEc-----cCC---EEEEEEe-----HHHHHHHHHHHHHHhCCC
Confidence 4467888886 7899999999999999999999874 222 3334443 366889999999999986
No 60
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=89.15 E-value=1.5 Score=40.51 Aligned_cols=67 Identities=16% Similarity=0.157 Sum_probs=46.1
Q ss_pred cccEEEEEEcC-CCcchHHHHHHHHHhCCCeEeEeeeeccC-CCC--eEEEEEEEEeCCCCCCHHHHHHHHHHHhh
Q 023530 40 LTHGIHVFHCP-DEVGIVAKLSECIASRGGNILAADVFVPE-KKN--VFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (281)
Q Consensus 40 ~~~~iltV~G~-DrpGIVa~VS~~La~~giNI~dl~q~~~~-~~g--~F~mrlev~~p~~~~~~~~L~~~L~~la~ 111 (281)
..+..|.+.-+ |+||-++++-+.|+.+|+|+..+++.-.. ..+ .|| ++++ . ..+-+.++++|+++..
T Consensus 199 ~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ff--iD~e--g-~~~d~~v~~aL~~L~~ 269 (313)
T 3mwb_A 199 ADKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFS--IDAD--G-HATDSRVADALAGLHR 269 (313)
T ss_dssp SEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEE--EEEE--S-CTTSHHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEE--EEEe--C-CCCcHHHHHHHHHHHH
Confidence 34555556665 99999999999999999999999985321 122 455 3443 2 2344667888877754
No 61
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=88.92 E-value=9.3 Score=38.00 Aligned_cols=129 Identities=14% Similarity=0.119 Sum_probs=76.6
Q ss_pred EEEEEEc-CCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhh-------c
Q 023530 43 GIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF-------N 114 (281)
Q Consensus 43 ~iltV~G-~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l-------~ 114 (281)
..|++.+ +|++|+.++|-+.|+++|+|+.-+.|... ..|.- .+.|.++. .+.+...+.++++..++ +
T Consensus 271 ~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~-~~~~~--~Isftv~~--~~~~~a~~~l~~~~~el~~~~~~~~ 345 (600)
T 3l76_A 271 AKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIH-DGNSN--DIAFTVVK--DLLNTAEAVTSAIAPALRSYPEADQ 345 (600)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCC-BTTEE--EEEEEECG--GGHHHHHHHHHHHGGGGSSSTTCSS
T ss_pred EEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeecc-CCCCc--eEEEEEeH--HHHHHHHHHHHHHHHHhhccccccC
Confidence 4566655 79999999999999999999988887542 23443 34555554 25667777788887777 3
Q ss_pred ccceeeeecCCCCCeeEEEEeeCCh---hHHHHHHHhhhcCCC--------CeeEEEEEeCCCCCCChhHHHHHHhCCC
Q 023530 115 AMRSVVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEGKL--------PVEITCVISNHDRGPNSHVIRFLERHGI 182 (281)
Q Consensus 115 l~~~~~~~~~~~~~~rIavl~Sg~G---snL~aLl~~~~~g~l--------~~eI~~Visn~pd~~~a~~~~~A~~~gI 182 (281)
.. .+.+ ....-+|.+.+.|-- ..+..+.....+..+ ...|.++|... | .+..+..+-+++..
T Consensus 346 ~~--~v~~--~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~istSe~~Is~vI~~~-d-~~~Av~aLh~~f~~ 418 (600)
T 3l76_A 346 EA--EIIV--EKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMISTSEVKVSCVIDQR-D-ADRAIAALSNAFGV 418 (600)
T ss_dssp SS--EEEE--ECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEEECSSEEEEEEEGG-G-HHHHHHHHHHHTTC
T ss_pred cc--eeEe--cCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEecCCCEEEEEEcHH-H-HHHHHHHHHHhhcc
Confidence 32 1222 244567888777541 222333333332222 24577777753 2 12234445556654
No 62
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=88.83 E-value=1.2 Score=40.43 Aligned_cols=64 Identities=20% Similarity=0.328 Sum_probs=44.1
Q ss_pred ccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccC-CCC--eEEEEEEEEeCCCCCCHHHHHHHHHHHhh
Q 023530 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE-KKN--VFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (281)
Q Consensus 41 ~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~-~~g--~F~mrlev~~p~~~~~~~~L~~~L~~la~ 111 (281)
+.+++++ +|+||-.+++-+.|+.+|+|+..+++.=.. ..+ .|| ++++ . ..+-+.++++|+++..
T Consensus 201 tsl~f~~--~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ff--vD~e--g-~~~d~~v~~aL~~L~~ 267 (283)
T 2qmx_A 201 TSIVFAL--PNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFY--ADFI--G-HREDQNVHNALENLRE 267 (283)
T ss_dssp EEEEEEE--ECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEE--EEEE--S-CTTSHHHHHHHHHHHT
T ss_pred EEEEEEc--CCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEE--EEEe--c-CCCcHHHHHHHHHHHH
Confidence 3444444 799999999999999999999999986322 122 344 3444 2 2234678888887754
No 63
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=88.49 E-value=1.3 Score=40.57 Aligned_cols=73 Identities=23% Similarity=0.269 Sum_probs=44.9
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHH--h
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV--Q 203 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L--~ 203 (281)
++.||+|+++|. |..+-..+.+. .. ..++++|.+.+ ++..+.++|+++|++... ..-+++++.- .
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~-~~--~~elvav~d~~---~~~~~~~~a~~~g~~~~~------~~~e~ll~~~~~~ 70 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRN-AK--YLEMGAMVGID---AASDGLARAQRMGVTTTY------AGVEGLIKLPEFA 70 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH-CS--SEEEEEEECSC---TTCHHHHHHHHTTCCEES------SHHHHHHHSGGGG
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhh-Cc--CeEEEEEEeCC---hhhhHHHHHHHcCCCccc------CCHHHHHhccCCC
Confidence 468999999987 44333333220 12 36888887765 344478899999987532 1122344332 2
Q ss_pred CCCEEEEe
Q 023530 204 NTDFLVLA 211 (281)
Q Consensus 204 ~~DlIVLA 211 (281)
++|+|+.|
T Consensus 71 ~iDvV~~a 78 (312)
T 1nvm_B 71 DIDFVFDA 78 (312)
T ss_dssp GEEEEEEC
T ss_pred CCcEEEEC
Confidence 68999987
No 64
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=88.44 E-value=1.1 Score=41.71 Aligned_cols=74 Identities=12% Similarity=0.159 Sum_probs=43.9
Q ss_pred CCCCeeEEEEeeCC-hh-HHHHHHHhhh-cCCC--CeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHH
Q 023530 125 IDPKYKVAVLASKQ-EH-CLVDFLYGWQ-EGKL--PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELL 199 (281)
Q Consensus 125 ~~~~~rIavl~Sg~-Gs-nL~aLl~~~~-~g~l--~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~ 199 (281)
++.|+||||++.|. |. -+.++...-. ...+ .++|++|..-. ...+.+.|+++|+|-.+- + +.
T Consensus 23 Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~----~~~a~~~a~~~~~~~~y~-----d----~~ 89 (412)
T 4gqa_A 23 MSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQD----QAMAERHAAKLGAEKAYG-----D----WR 89 (412)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSS----HHHHHHHHHHHTCSEEES-----S----HH
T ss_pred ccccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCC----HHHHHHHHHHcCCCeEEC-----C----HH
Confidence 45678999999987 32 2333332210 0111 36888876533 345778899999986552 2 22
Q ss_pred HHHh--CCCEEEEe
Q 023530 200 ELVQ--NTDFLVLA 211 (281)
Q Consensus 200 ~~L~--~~DlIVLA 211 (281)
++|+ ++|+|++|
T Consensus 90 ~ll~~~~vD~V~I~ 103 (412)
T 4gqa_A 90 ELVNDPQVDVVDIT 103 (412)
T ss_dssp HHHHCTTCCEEEEC
T ss_pred HHhcCCCCCEEEEC
Confidence 4555 68888876
No 65
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=87.94 E-value=1.3 Score=40.02 Aligned_cols=69 Identities=16% Similarity=0.206 Sum_probs=43.1
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhc-CCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~-g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~-- 203 (281)
++||+|++.|. |... +..++. +...+++++|.+.. ...+.+.|+++|+|..+- + +.++++
T Consensus 2 ~~rigiiG~G~ig~~~---~~~l~~~~~~~~~l~av~d~~----~~~a~~~a~~~~~~~~~~-----~----~~~ll~~~ 65 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDF---TAVLQTLPRSEHQVVAVAARD----LSRAKEFAQKHDIPKAYG-----S----YEELAKDP 65 (334)
T ss_dssp CEEEEEECCSHHHHHH---HHHHTTSCTTTEEEEEEECSS----HHHHHHHHHHHTCSCEES-----S----HHHHHHCT
T ss_pred ccEEEEECchHHHHHH---HHHHHhCCCCCeEEEEEEcCC----HHHHHHHHHHcCCCcccC-----C----HHHHhcCC
Confidence 57999999987 3322 222221 22236888876643 235678899999985441 2 235555
Q ss_pred CCCEEEEec
Q 023530 204 NTDFLVLAR 212 (281)
Q Consensus 204 ~~DlIVLAg 212 (281)
++|+|++|-
T Consensus 66 ~vD~V~i~t 74 (334)
T 3ohs_X 66 NVEVAYVGT 74 (334)
T ss_dssp TCCEEEECC
T ss_pred CCCEEEECC
Confidence 688888873
No 66
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=87.41 E-value=1.3 Score=40.40 Aligned_cols=69 Identities=17% Similarity=0.244 Sum_probs=42.3
Q ss_pred CCCeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 126 DPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 126 ~~~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
.+++||+|++.|. |.. +.+|... . + .+++++|.... ...+.+.|+++|++++. + +.++++
T Consensus 11 ~~~~rvgiiG~G~~g~~~~~~l~~~-~-~--~~~lvav~d~~----~~~~~~~~~~~~~~~~~------~----~~~ll~ 72 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNHFGALEKH-A-D--RAELIDVCDID----PAALKAAVERTGARGHA------S----LTDMLA 72 (354)
T ss_dssp SSCEEEEEECCSTTHHHHHHHHHHT-T-T--TEEEEEEECSS----HHHHHHHHHHHCCEEES------C----HHHHHH
T ss_pred CCcceEEEEcCcHHHHHHHHHHHhC-C-C--CeEEEEEEcCC----HHHHHHHHHHcCCceeC------C----HHHHhc
Confidence 4678999999997 432 3333331 1 1 36888776543 23466778889984321 2 224454
Q ss_pred --CCCEEEEec
Q 023530 204 --NTDFLVLAR 212 (281)
Q Consensus 204 --~~DlIVLAg 212 (281)
++|+|++|-
T Consensus 73 ~~~~D~V~i~t 83 (354)
T 3q2i_A 73 QTDADIVILTT 83 (354)
T ss_dssp HCCCSEEEECS
T ss_pred CCCCCEEEECC
Confidence 788888874
No 67
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=86.90 E-value=2.3 Score=39.43 Aligned_cols=61 Identities=11% Similarity=0.040 Sum_probs=41.7
Q ss_pred CCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhh
Q 023530 50 PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (281)
Q Consensus 50 ~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~ 112 (281)
.|+||-++++-+.|+.+|+|+..+++.-.. .+.+.-.+-+++.. ..+-..++++|+++...
T Consensus 216 ~~~pGaL~~~L~~Fa~~gINLtkIESRP~~-~~~~~Y~FfiD~eg-~~~d~~v~~AL~~L~~~ 276 (329)
T 3luy_A 216 VTGPGVLANLLDVFRDAGLNMTSFISRPIK-GRTGTYSFIVTLDA-APWEERFRDALVEIAEH 276 (329)
T ss_dssp CCSTTHHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEEEEEESS-CTTSHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHCCcceEEEEeeECC-CCCccEEEEEEEeC-CcCCHHHHHHHHHHHHh
Confidence 389999999999999999999999985321 11111122245444 34456788888887543
No 68
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=86.86 E-value=2.2 Score=38.60 Aligned_cols=80 Identities=11% Similarity=0.081 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCCh--hHHHHHHHhhhcCCCCee-EEEEEeCCCCCCC-----
Q 023530 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVE-ITCVISNHDRGPN----- 170 (281)
Q Consensus 99 ~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~G--snL~aLl~~~~~g~l~~e-I~~Visn~pd~~~----- 170 (281)
...+.+.+.+...+.++- ....||+|.+||+- ++|-.++..... .++.+ +.+|..||.-++.
T Consensus 4 ~~~~~~~~~~~i~~~~l~---------~~~~~vlva~SGG~DS~~Ll~ll~~~~~-~~g~~~v~av~vd~g~r~~s~~~~ 73 (317)
T 1wy5_A 4 ESRVIRKVLALQNDEKIF---------SGERRVLIAFSGGVDSVVLTDVLLKLKN-YFSLKEVALAHFNHMLRESAERDE 73 (317)
T ss_dssp HHHHHHHHHHHHHHHCSC---------SSCCEEEEECCSSHHHHHHHHHHHHSTT-TTTCSEEEEEEEECCSSTHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCC---------CCCCEEEEEecchHHHHHHHHHHHHHHH-HcCCCEEEEEEEECCCCcccHHHH
Confidence 345666666666665541 23458999999983 566666654322 23467 8888888743321
Q ss_pred hhHHHHHHhCCCCEEEeC
Q 023530 171 SHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 171 a~~~~~A~~~gIP~~~i~ 188 (281)
..+.++|+++|||+++++
T Consensus 74 ~~v~~~a~~lgi~~~v~~ 91 (317)
T 1wy5_A 74 EFCKEFAKERNMKIFVGK 91 (317)
T ss_dssp HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHcCCcEEEEE
Confidence 247889999999999876
No 69
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=86.35 E-value=1.4 Score=39.81 Aligned_cols=67 Identities=18% Similarity=0.270 Sum_probs=38.5
Q ss_pred CCeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh-
Q 023530 127 PKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (281)
Q Consensus 127 ~~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~- 203 (281)
+++||+|++.|. |.. +.+|.. .+ .+++++|.+..++ .+.+.|+++|+|..+- + +.++++
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~---~~--~~~~~av~d~~~~----~~~~~a~~~~~~~~~~-----~----~~~ll~~ 65 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRL---AG--NGEVVAVSSRTLE----SAQAFANKYHLPKAYD-----K----LEDMLAD 65 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHH---HC--SEEEEEEECSCSS----TTCC---CCCCSCEES-----C----HHHHHTC
T ss_pred CceEEEEEechHHHHHHHHHHHh---CC--CcEEEEEEcCCHH----HHHHHHHHcCCCcccC-----C----HHHHhcC
Confidence 468999999997 332 333322 23 3688888765432 3456788899874431 1 224555
Q ss_pred -CCCEEEEe
Q 023530 204 -NTDFLVLA 211 (281)
Q Consensus 204 -~~DlIVLA 211 (281)
++|+|++|
T Consensus 66 ~~~D~V~i~ 74 (329)
T 3evn_A 66 ESIDVIYVA 74 (329)
T ss_dssp TTCCEEEEC
T ss_pred CCCCEEEEC
Confidence 67888776
No 70
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=85.72 E-value=2.5 Score=40.09 Aligned_cols=77 Identities=14% Similarity=0.186 Sum_probs=50.7
Q ss_pred CeeEEEEee-CC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCCh-----------
Q 023530 128 KYKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENER----------- 194 (281)
Q Consensus 128 ~~rIavl~S-g~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~----------- 194 (281)
|+||+|++| |+ |+..-+++.+..+ ..+++++.+++ .-..+.+.++++++....+.... +.
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~---~~~v~al~ag~---ni~~l~~~~~~f~~~~v~v~d~~-~~~~l~~~l~~~~ 76 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLD---RYQVIALTANR---NVKDLADAAKRTNAKRAVIADPS-LYNDLKEALAGSS 76 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGG---GEEEEEEEESS---CHHHHHHHHHHTTCSEEEESCGG-GHHHHHHHTTTCS
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcC---cEEEEEEEcCC---CHHHHHHHHHHcCCcEEEEcChH-HHHHHHHHhccCC
Confidence 589999999 77 6776667765322 26788886765 23356778899999887765211 11
Q ss_pred ------HHHHHHHHh-CCCEEEEe
Q 023530 195 ------EEELLELVQ-NTDFLVLA 211 (281)
Q Consensus 195 ------e~~l~~~L~-~~DlIVLA 211 (281)
++.+.+++. .+|+||-|
T Consensus 77 ~~v~~g~~~~~el~~~~iDvVV~a 100 (388)
T 1r0k_A 77 VEAAAGADALVEAAMMGADWTMAA 100 (388)
T ss_dssp SEEEESHHHHHHHHTSCCSEEEEC
T ss_pred cEEEeCccHHHHHHcCCCCEEEEe
Confidence 223345555 58999887
No 71
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=85.34 E-value=2 Score=38.81 Aligned_cols=69 Identities=17% Similarity=0.248 Sum_probs=42.2
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~-- 203 (281)
+++||+|++.|. |..+-..+.. .+ ..++++|.... ...+.+.|+++|+|..+- + +.++++
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~--~~--~~~l~av~d~~----~~~~~~~~~~~~~~~~~~-----~----~~~ll~~~ 66 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRE--SA--QAEVRGIASRR----LENAQKMAKELAIPVAYG-----S----YEELCKDE 66 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHH--SS--SEEEEEEBCSS----SHHHHHHHHHTTCCCCBS-----S----HHHHHHCT
T ss_pred CeEEEEEECchHHHHHHHHHHHh--CC--CcEEEEEEeCC----HHHHHHHHHHcCCCceeC-----C----HHHHhcCC
Confidence 468999999997 4332222222 12 36888776543 345678899999873331 2 224555
Q ss_pred CCCEEEEec
Q 023530 204 NTDFLVLAR 212 (281)
Q Consensus 204 ~~DlIVLAg 212 (281)
++|+|++|-
T Consensus 67 ~~D~V~i~t 75 (330)
T 3e9m_A 67 TIDIIYIPT 75 (330)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEcC
Confidence 788888873
No 72
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=85.24 E-value=1.3 Score=37.18 Aligned_cols=63 Identities=19% Similarity=0.257 Sum_probs=47.4
Q ss_pred ccEEEEEEcC---CCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhccc
Q 023530 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (281)
Q Consensus 41 ~~~iltV~G~---DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~ 116 (281)
.-..++++|. ++||+.+++.+.|+++|+||.-+++. .. .+.+-++ .++..++++.+-+.|.++
T Consensus 95 ~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~IstS-----ei---~Is~vV~-----~~d~~~Av~aLH~~f~l~ 160 (181)
T 3s1t_A 95 HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELISTS-----EI---RISVLCR-----DTELDKAVVALHEAFGLG 160 (181)
T ss_dssp CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEEE-----TT---EEEEEEE-----GGGHHHHHHHHHHHHTCC
T ss_pred CEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEEcC-----CC---EEEEEEe-----HHHHHHHHHHHHHHHcCC
Confidence 4578999987 89999999999999999999988842 11 2223232 355678888888888775
No 73
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=84.71 E-value=3.6 Score=37.12 Aligned_cols=71 Identities=18% Similarity=0.193 Sum_probs=42.6
Q ss_pred CeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--CC
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NT 205 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~--~~ 205 (281)
|+||+|++.|.-.. ..+..+ .. .+++++|....++.....+.+.++++|++...+. +.+ ++|+ ++
T Consensus 2 ~~rvgiiG~G~~~~--~~~~~l-~~--~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~ll~~~~v 68 (337)
T 3ip3_A 2 SLKICVIGSSGHFR--YALEGL-DE--ECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYN----NWW----EMLEKEKP 68 (337)
T ss_dssp CEEEEEECSSSCHH--HHHTTC-CT--TEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECS----SHH----HHHHHHCC
T ss_pred ceEEEEEccchhHH--HHHHhc-CC--CcEEEEEecCCchhhHHHHHHHHHHcCCCCcccC----CHH----HHhcCCCC
Confidence 57999999875221 344444 22 4799998875431112345566778898544432 222 4444 78
Q ss_pred CEEEEe
Q 023530 206 DFLVLA 211 (281)
Q Consensus 206 DlIVLA 211 (281)
|+|++|
T Consensus 69 D~V~I~ 74 (337)
T 3ip3_A 69 DILVIN 74 (337)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 998887
No 74
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=84.63 E-value=2.4 Score=38.34 Aligned_cols=70 Identities=11% Similarity=0.115 Sum_probs=41.4
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--C
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~--~ 204 (281)
++||+|++.|. |.. .+..+....-.+++++|.... ...+.+.|+++||+..... + +.++++ +
T Consensus 2 ~~rigiIG~G~~g~~---~~~~l~~~~~~~~l~av~d~~----~~~~~~~~~~~g~~~~~~~----~----~~~ll~~~~ 66 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKE---HINRITNKLSGAEIVAVTDVN----QEAAQKVVEQYQLNATVYP----N----DDSLLADEN 66 (344)
T ss_dssp CEEEEEECCSHHHHH---HHHHHHHTCSSEEEEEEECSS----HHHHHHHHHHTTCCCEEES----S----HHHHHHCTT
T ss_pred eEEEEEECccHHHHH---HHHHHHhhCCCcEEEEEEcCC----HHHHHHHHHHhCCCCeeeC----C----HHHHhcCCC
Confidence 57999999987 332 222222111137888776543 3456778899997544432 1 224454 5
Q ss_pred CCEEEEec
Q 023530 205 TDFLVLAR 212 (281)
Q Consensus 205 ~DlIVLAg 212 (281)
+|+|++|-
T Consensus 67 ~D~V~i~t 74 (344)
T 3mz0_A 67 VDAVLVTS 74 (344)
T ss_dssp CCEEEECS
T ss_pred CCEEEECC
Confidence 88888864
No 75
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=84.46 E-value=1.8 Score=39.56 Aligned_cols=66 Identities=21% Similarity=0.222 Sum_probs=41.8
Q ss_pred CCeeEEEEeeCC-hh--HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 127 PKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 127 ~~~rIavl~Sg~-Gs--nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
+++||+|++.|. |. -+.+|.. .+ .+++++|.+.. ...+.+.|+++|+|.+. + +.++++
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~---~~--~~~l~av~d~~----~~~~~~~a~~~g~~~~~-~---------~~~ll~ 86 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEA---EP--LTEVTAIASRR----WDRAKRFTERFGGEPVE-G---------YPALLE 86 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHH---CT--TEEEEEEEESS----HHHHHHHHHHHCSEEEE-S---------HHHHHT
T ss_pred CceEEEEEcCcHHHHHHHHHHHHh---CC--CeEEEEEEcCC----HHHHHHHHHHcCCCCcC-C---------HHHHhc
Confidence 357999999987 33 2344333 12 37888886643 23567788999998752 1 224554
Q ss_pred --CCCEEEEe
Q 023530 204 --NTDFLVLA 211 (281)
Q Consensus 204 --~~DlIVLA 211 (281)
++|+|++|
T Consensus 87 ~~~~D~V~i~ 96 (350)
T 3rc1_A 87 RDDVDAVYVP 96 (350)
T ss_dssp CTTCSEEEEC
T ss_pred CCCCCEEEEC
Confidence 67877776
No 76
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=84.34 E-value=2.7 Score=38.13 Aligned_cols=70 Identities=23% Similarity=0.216 Sum_probs=43.2
Q ss_pred CCCCeeEEEEeeC-C-hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH
Q 023530 125 IDPKYKVAVLASK-Q-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (281)
Q Consensus 125 ~~~~~rIavl~Sg-~-Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~ 201 (281)
++.++||+|++.| . |. -+.+|.. .+. .+++++|.... ...+.+.|+++|+|..+- + +.++
T Consensus 15 ~~~~irvgiIG~G~~~g~~~~~~l~~---~~~-~~~lvav~d~~----~~~~~~~a~~~~~~~~~~-----~----~~~l 77 (340)
T 1zh8_A 15 PLRKIRLGIVGCGIAARELHLPALKN---LSH-LFEITAVTSRT----RSHAEEFAKMVGNPAVFD-----S----YEEL 77 (340)
T ss_dssp -CCCEEEEEECCSHHHHHTHHHHHHT---TTT-TEEEEEEECSS----HHHHHHHHHHHSSCEEES-----C----HHHH
T ss_pred CCCceeEEEEecCHHHHHHHHHHHHh---CCC-ceEEEEEEcCC----HHHHHHHHHHhCCCcccC-----C----HHHH
Confidence 4567899999999 3 43 3444322 111 37888876643 234677889999865441 1 2345
Q ss_pred Hh--CCCEEEEe
Q 023530 202 VQ--NTDFLVLA 211 (281)
Q Consensus 202 L~--~~DlIVLA 211 (281)
|+ ++|+|+.|
T Consensus 78 l~~~~vD~V~i~ 89 (340)
T 1zh8_A 78 LESGLVDAVDLT 89 (340)
T ss_dssp HHSSCCSEEEEC
T ss_pred hcCCCCCEEEEe
Confidence 55 68888887
No 77
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=84.25 E-value=2.8 Score=38.31 Aligned_cols=70 Identities=11% Similarity=0.151 Sum_probs=42.0
Q ss_pred CCeeEEEEeeCC-hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh-
Q 023530 127 PKYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (281)
Q Consensus 127 ~~~rIavl~Sg~-Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~- 203 (281)
.++||+|++.|. |. -+.+|... .+ .+++++|.... ...+.+.|+++|++..... + +.++++
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~--~~--~~~lvav~d~~----~~~~~~~a~~~g~~~~~~~----~----~~~ll~~ 85 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANT--VS--GVEVVAVCDIV----AGRAQAALDKYAIEAKDYN----D----YHDLIND 85 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--CT--TEEEEEEECSS----TTHHHHHHHHHTCCCEEES----S----HHHHHHC
T ss_pred CeeeEEEECCcHHHHHHHHHHHhh--CC--CcEEEEEEeCC----HHHHHHHHHHhCCCCeeeC----C----HHHHhcC
Confidence 457999999987 33 23333311 12 37888876644 2356778999997443332 1 224454
Q ss_pred -CCCEEEEec
Q 023530 204 -NTDFLVLAR 212 (281)
Q Consensus 204 -~~DlIVLAg 212 (281)
++|+|++|-
T Consensus 86 ~~~D~V~i~t 95 (357)
T 3ec7_A 86 KDVEVVIITA 95 (357)
T ss_dssp TTCCEEEECS
T ss_pred CCCCEEEEcC
Confidence 678888764
No 78
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=83.76 E-value=3.9 Score=38.90 Aligned_cols=61 Identities=16% Similarity=0.215 Sum_probs=44.1
Q ss_pred CeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCCh-----hHHHHHHhCCCCEEEeC
Q 023530 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNS-----HVIRFLERHGIPYHYLC 188 (281)
Q Consensus 128 ~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a-----~~~~~A~~~gIP~~~i~ 188 (281)
..||+|.+||+- ++|-.++..........++.+|..||.-++.+ .+.++|+++|||+++++
T Consensus 13 ~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~ 80 (433)
T 1ni5_A 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVER 80 (433)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEE
Confidence 347999999973 66666666543221346899999998544332 47889999999999987
No 79
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=83.72 E-value=3.9 Score=37.49 Aligned_cols=68 Identities=10% Similarity=0.104 Sum_probs=42.1
Q ss_pred CeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--CC
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NT 205 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~--~~ 205 (281)
++||+|++.|..+. ..++...+.. .+++++|.... ...+.+.|+++|++..+- + +.++|+ ++
T Consensus 26 ~irvgiiG~G~~~~-~~~~~~~~~~--~~~lvav~d~~----~~~a~~~a~~~~~~~~~~-----~----~~~ll~~~~v 89 (361)
T 3u3x_A 26 ELRFAAVGLNHNHI-YGQVNCLLRA--GARLAGFHEKD----DALAAEFSAVYADARRIA-----T----AEEILEDENI 89 (361)
T ss_dssp CCEEEEECCCSTTH-HHHHHHHHHT--TCEEEEEECSC----HHHHHHHHHHSSSCCEES-----C----HHHHHTCTTC
T ss_pred CcEEEEECcCHHHH-HHHHHHhhcC--CcEEEEEEcCC----HHHHHHHHHHcCCCcccC-----C----HHHHhcCCCC
Confidence 57999999998542 1222222222 37899887654 235677899998654441 1 224555 58
Q ss_pred CEEEEe
Q 023530 206 DFLVLA 211 (281)
Q Consensus 206 DlIVLA 211 (281)
|+|++|
T Consensus 90 D~V~I~ 95 (361)
T 3u3x_A 90 GLIVSA 95 (361)
T ss_dssp CEEEEC
T ss_pred CEEEEe
Confidence 888876
No 80
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=83.69 E-value=1.9 Score=38.94 Aligned_cols=68 Identities=13% Similarity=0.181 Sum_probs=40.4
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~-- 203 (281)
.++||+|++.|. |..+-..+.+ .+ ..++++|.... ...+.+.|+++|++++ . + +.++++
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~--~~--~~~l~av~d~~----~~~~~~~a~~~g~~~~--~----~----~~~~l~~~ 64 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAA--NP--DLELVVIADPF----IEGAQRLAEANGAEAV--A----S----PDEVFARD 64 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--CT--TEEEEEEECSS----HHHHHHHHHTTTCEEE--S----S----HHHHTTCS
T ss_pred CceEEEEECCcHHHHHHHHHHHh--CC--CcEEEEEECCC----HHHHHHHHHHcCCcee--C----C----HHHHhcCC
Confidence 468999999987 4332222222 12 36888775543 2346677888885432 1 1 224555
Q ss_pred CCCEEEEec
Q 023530 204 NTDFLVLAR 212 (281)
Q Consensus 204 ~~DlIVLAg 212 (281)
++|+|++|-
T Consensus 65 ~~D~V~i~t 73 (344)
T 3euw_A 65 DIDGIVIGS 73 (344)
T ss_dssp CCCEEEECS
T ss_pred CCCEEEEeC
Confidence 678888764
No 81
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=83.54 E-value=2.5 Score=38.23 Aligned_cols=71 Identities=6% Similarity=-0.021 Sum_probs=41.0
Q ss_pred CeeEEEEeeCC-hh-HHHHHHHhhhcC--CCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 128 KYKVAVLASKQ-EH-CLVDFLYGWQEG--KLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 128 ~~rIavl~Sg~-Gs-nL~aLl~~~~~g--~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
+.||||.+.|. |. -+.++...-.-. ...++|++|..-. ...+.+.|+++|+|..+-+ +.++|+
T Consensus 6 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~----~~~a~~~a~~~g~~~~~~d---------~~~ll~ 72 (390)
T 4h3v_A 6 NLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRD----AEAVRAAAGKLGWSTTETD---------WRTLLE 72 (390)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSS----HHHHHHHHHHHTCSEEESC---------HHHHTT
T ss_pred cCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCC----HHHHHHHHHHcCCCcccCC---------HHHHhc
Confidence 46899999987 32 233332221111 1235888876543 2456788999999966522 224454
Q ss_pred --CCCEEEEe
Q 023530 204 --NTDFLVLA 211 (281)
Q Consensus 204 --~~DlIVLA 211 (281)
++|+|+.|
T Consensus 73 ~~~iDaV~I~ 82 (390)
T 4h3v_A 73 RDDVQLVDVC 82 (390)
T ss_dssp CTTCSEEEEC
T ss_pred CCCCCEEEEe
Confidence 56766665
No 82
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=83.47 E-value=2.8 Score=37.61 Aligned_cols=66 Identities=9% Similarity=0.132 Sum_probs=40.9
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--C
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~--~ 204 (281)
++||+|++.|. |..+-..+.+ .+ ..++++|.... ...+.+.|+++|++ + . + +.++++ +
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~--~~--~~~l~av~d~~----~~~~~~~~~~~~~~--~-~----~----~~~~l~~~~ 63 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSG--NA--DARLVAVADAF----PAAAEAIAGAYGCE--V-R----T----IDAIEAAAD 63 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--CT--TEEEEEEECSS----HHHHHHHHHHTTCE--E-C----C----HHHHHHCTT
T ss_pred ceEEEEECCCHHHHHHHHHHhh--CC--CcEEEEEECCC----HHHHHHHHHHhCCC--c-C----C----HHHHhcCCC
Confidence 57999999987 4332222222 12 36888775533 34567788999998 3 2 1 224455 7
Q ss_pred CCEEEEec
Q 023530 205 TDFLVLAR 212 (281)
Q Consensus 205 ~DlIVLAg 212 (281)
+|+|++|-
T Consensus 64 ~D~V~i~t 71 (331)
T 4hkt_A 64 IDAVVICT 71 (331)
T ss_dssp CCEEEECS
T ss_pred CCEEEEeC
Confidence 88888874
No 83
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=83.14 E-value=1.9 Score=39.82 Aligned_cols=66 Identities=18% Similarity=0.192 Sum_probs=41.7
Q ss_pred CeeEEEEeeC-C-hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh-
Q 023530 128 KYKVAVLASK-Q-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (281)
Q Consensus 128 ~~rIavl~Sg-~-Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~- 203 (281)
++||+|++.| . |. -+.+|.. .+ .+++++|.... ...+.+.|+++|+|++. + +.++|+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~---~~--~~~l~av~d~~----~~~~~~~a~~~g~~~~~------~----~~ell~~ 62 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRH---HP--DAQIVAACDPN----EDVRERFGKEYGIPVFA------T----LAEMMQH 62 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHH---CT--TEEEEEEECSC----HHHHHHHHHHHTCCEES------S----HHHHHHH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHh---CC--CeEEEEEEeCC----HHHHHHHHHHcCCCeEC------C----HHHHHcC
Confidence 6799999999 4 32 2343332 12 37888887643 23466788899998432 2 224454
Q ss_pred -CCCEEEEec
Q 023530 204 -NTDFLVLAR 212 (281)
Q Consensus 204 -~~DlIVLAg 212 (281)
++|+|+++-
T Consensus 63 ~~vD~V~i~t 72 (387)
T 3moi_A 63 VQMDAVYIAS 72 (387)
T ss_dssp SCCSEEEECS
T ss_pred CCCCEEEEcC
Confidence 689988873
No 84
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=83.12 E-value=5.6 Score=35.65 Aligned_cols=69 Identities=9% Similarity=0.166 Sum_probs=40.2
Q ss_pred CCCeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 126 DPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 126 ~~~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
..++||+|++.|. |.. +.++... .+ .+++++|.... ...+.+.|+++|++..+ + + +.++++
T Consensus 6 ~~~~~v~iiG~G~ig~~~~~~l~~~--~~--~~~~vav~d~~----~~~~~~~a~~~g~~~~~-~----~----~~~~l~ 68 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHARHLVNK--IQ--GVKLVAACALD----SNQLEWAKNELGVETTY-T----N----YKDMID 68 (346)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHHHT--CS--SEEEEEEECSC----HHHHHHHHHTTCCSEEE-S----C----HHHHHT
T ss_pred CCcceEEEEcCCHHHHHHHHHHHhc--CC--CcEEEEEecCC----HHHHHHHHHHhCCCccc-C----C----HHHHhc
Confidence 5678999999987 433 2333211 12 36788776543 23456678889987443 1 1 223444
Q ss_pred --CCCEEEEe
Q 023530 204 --NTDFLVLA 211 (281)
Q Consensus 204 --~~DlIVLA 211 (281)
++|+|++|
T Consensus 69 ~~~~D~V~i~ 78 (346)
T 3cea_A 69 TENIDAIFIV 78 (346)
T ss_dssp TSCCSEEEEC
T ss_pred CCCCCEEEEe
Confidence 57777766
No 85
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=82.33 E-value=3.1 Score=37.62 Aligned_cols=68 Identities=12% Similarity=0.172 Sum_probs=42.1
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--C
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~--~ 204 (281)
|+||+|.+.|. |.. ++..+..- -.+++++|.... ...+.+.|+++|++..+- + +.++++ +
T Consensus 2 ~~rvgiIG~G~~g~~---~~~~l~~~-~~~~l~av~d~~----~~~~~~~~~~~~~~~~~~-----~----~~~ll~~~~ 64 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTI---HAENLKMI-DDAILYAISDVR----EDRLREMKEKLGVEKAYK-----D----PHELIEDPN 64 (344)
T ss_dssp CEEEEEECCSHHHHH---HHHHGGGS-TTEEEEEEECSC----HHHHHHHHHHHTCSEEES-----S----HHHHHHCTT
T ss_pred eeEEEEEcCCHHHHH---HHHHHHhC-CCcEEEEEECCC----HHHHHHHHHHhCCCceeC-----C----HHHHhcCCC
Confidence 57999999987 332 23333221 136888776543 245677889999975542 1 224555 7
Q ss_pred CCEEEEec
Q 023530 205 TDFLVLAR 212 (281)
Q Consensus 205 ~DlIVLAg 212 (281)
+|+|++|-
T Consensus 65 ~D~V~i~t 72 (344)
T 3ezy_A 65 VDAVLVCS 72 (344)
T ss_dssp CCEEEECS
T ss_pred CCEEEEcC
Confidence 89888874
No 86
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=81.69 E-value=4.2 Score=36.96 Aligned_cols=70 Identities=13% Similarity=0.141 Sum_probs=40.6
Q ss_pred CCCeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCC--EEEeCCCCCChHHHHHHH
Q 023530 126 DPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELLEL 201 (281)
Q Consensus 126 ~~~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP--~~~i~~k~~~~e~~l~~~ 201 (281)
..++||+|++.|. |.. +.+|.. .+ ..++++|.+.. ...+.+.|+++|+| ..... + +.++
T Consensus 4 ~~~~~vgiiG~G~ig~~~~~~l~~---~~--~~~lv~v~d~~----~~~~~~~a~~~~~~~~~~~~~----~----~~~l 66 (362)
T 1ydw_A 4 ETQIRIGVMGCADIARKVSRAIHL---AP--NATISGVASRS----LEKAKAFATANNYPESTKIHG----S----YESL 66 (362)
T ss_dssp --CEEEEEESCCTTHHHHHHHHHH---CT--TEEEEEEECSS----HHHHHHHHHHTTCCTTCEEES----S----HHHH
T ss_pred CCceEEEEECchHHHHHHHHHHhh---CC--CcEEEEEEcCC----HHHHHHHHHHhCCCCCCeeeC----C----HHHH
Confidence 4578999999987 432 333322 12 36888776643 23467788999974 22221 1 2244
Q ss_pred Hh--CCCEEEEec
Q 023530 202 VQ--NTDFLVLAR 212 (281)
Q Consensus 202 L~--~~DlIVLAg 212 (281)
++ ++|+|++|-
T Consensus 67 l~~~~~D~V~i~t 79 (362)
T 1ydw_A 67 LEDPEIDALYVPL 79 (362)
T ss_dssp HHCTTCCEEEECC
T ss_pred hcCCCCCEEEEcC
Confidence 54 688888873
No 87
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=81.64 E-value=2.6 Score=37.38 Aligned_cols=67 Identities=12% Similarity=0.127 Sum_probs=40.6
Q ss_pred CeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCC
Q 023530 128 KYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (281)
Q Consensus 128 ~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~ 205 (281)
++||+|++.|. |.. +...+.. .+ .+++++|.... ...+.+.|+++|++. + . +.+ ++++++
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~--~~--~~~l~av~d~~----~~~~~~~a~~~~~~~-~-~----~~~----~ll~~~ 67 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTK--SE--RFEFVGAFTPN----KVKREKICSDYRIMP-F-D----SIE----SLAKKC 67 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTS--CS--SSEEEEEECSC----HHHHHHHHHHHTCCB-C-S----CHH----HHHTTC
T ss_pred cCcEEEEecCHHHHHHHHHHHHh--CC--CeEEEEEECCC----HHHHHHHHHHcCCCC-c-C----CHH----HHHhcC
Confidence 57999999987 332 2222221 12 36888776643 235677888999886 2 2 222 333378
Q ss_pred CEEEEec
Q 023530 206 DFLVLAR 212 (281)
Q Consensus 206 DlIVLAg 212 (281)
|+|++|-
T Consensus 68 D~V~i~t 74 (308)
T 3uuw_A 68 DCIFLHS 74 (308)
T ss_dssp SEEEECC
T ss_pred CEEEEeC
Confidence 8888763
No 88
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=80.80 E-value=4.3 Score=37.60 Aligned_cols=72 Identities=11% Similarity=0.063 Sum_probs=42.7
Q ss_pred CCeeEEEEeeCC----hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCC--EEEeCCCCCChHHHHH
Q 023530 127 PKYKVAVLASKQ----EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELL 199 (281)
Q Consensus 127 ~~~rIavl~Sg~----Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP--~~~i~~k~~~~e~~l~ 199 (281)
+++||+|++.|. |. -+.++.. .+ .++++++++++ ....+.+.|+++|+| ..+ .+.+ +++
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~---~~--~~~lva~v~d~---~~~~a~~~a~~~g~~~~~~~-----~~~~-~ll 76 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALR---DN--TFVLVAGAFDI---DPIRGSAFGEQLGVDSERCY-----ADYL-SMF 76 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHG---GG--SEEEEEEECCS---SHHHHHHHHHHTTCCGGGBC-----SSHH-HHH
T ss_pred CcceEEEEcCCccchhHHHHHHHHhh---CC--CeEEEEEEeCC---CHHHHHHHHHHhCCCcceee-----CCHH-HHH
Confidence 468999999997 32 2233322 22 26888766664 234567889999997 222 1233 343
Q ss_pred HHH---h-CCCEEEEec
Q 023530 200 ELV---Q-NTDFLVLAR 212 (281)
Q Consensus 200 ~~L---~-~~DlIVLAg 212 (281)
+.- . ++|+|+++-
T Consensus 77 ~~~~~~~~~vD~V~i~t 93 (398)
T 3dty_A 77 EQEARRADGIQAVSIAT 93 (398)
T ss_dssp HHHTTCTTCCSEEEEES
T ss_pred hcccccCCCCCEEEECC
Confidence 321 1 489988874
No 89
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=80.28 E-value=5.2 Score=35.92 Aligned_cols=68 Identities=15% Similarity=0.190 Sum_probs=39.8
Q ss_pred CeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--CC
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NT 205 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~--~~ 205 (281)
++||+|++.|..+.. .++..++.. .+++++|....++ .+.+.|++++.+..+ . + +.++|+ ++
T Consensus 4 ~~rvgiiG~G~~~~~-~~~~~l~~~--~~~lvav~d~~~~----~~~~~a~~~~~~~~~-~----~----~~~ll~~~~~ 67 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIY-DMCQQLIDA--GAELAGVFESDSD----NRAKFTSLFPSVPFA-A----S----AEQLITDASI 67 (336)
T ss_dssp CCEEEEECCSSTHHH-HHHHHHHHT--TCEEEEEECSCTT----SCHHHHHHSTTCCBC-S----C----HHHHHTCTTC
T ss_pred ccEEEEECCChHHHH-HhhhhhcCC--CcEEEEEeCCCHH----HHHHHHHhcCCCccc-C----C----HHHHhhCCCC
Confidence 579999999875431 223333222 3689888775432 346778888533211 1 1 224555 67
Q ss_pred CEEEEe
Q 023530 206 DFLVLA 211 (281)
Q Consensus 206 DlIVLA 211 (281)
|+|+.+
T Consensus 68 D~V~i~ 73 (336)
T 2p2s_A 68 DLIACA 73 (336)
T ss_dssp CEEEEC
T ss_pred CEEEEe
Confidence 888876
No 90
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=79.90 E-value=3.5 Score=37.44 Aligned_cols=69 Identities=9% Similarity=0.117 Sum_probs=41.1
Q ss_pred CCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--C
Q 023530 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (281)
Q Consensus 127 ~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~--~ 204 (281)
.++||+|++.|.-. ...+..+..-. .+++++|.... ...+.+.|+++|++. + . + +.++++ +
T Consensus 4 ~~~~vgiiG~G~~g--~~~~~~l~~~~-~~~lvav~d~~----~~~~~~~~~~~g~~~-~-~----~----~~~~l~~~~ 66 (354)
T 3db2_A 4 NPVGVAAIGLGRWA--YVMADAYTKSE-KLKLVTCYSRT----EDKREKFGKRYNCAG-D-A----T----MEALLARED 66 (354)
T ss_dssp CCEEEEEECCSHHH--HHHHHHHTTCS-SEEEEEEECSS----HHHHHHHHHHHTCCC-C-S----S----HHHHHHCSS
T ss_pred CcceEEEEccCHHH--HHHHHHHHhCC-CcEEEEEECCC----HHHHHHHHHHcCCCC-c-C----C----HHHHhcCCC
Confidence 46799999998721 12333332211 37888776543 234667888889875 2 1 2 224453 6
Q ss_pred CCEEEEec
Q 023530 205 TDFLVLAR 212 (281)
Q Consensus 205 ~DlIVLAg 212 (281)
+|+|++|-
T Consensus 67 ~D~V~i~t 74 (354)
T 3db2_A 67 VEMVIITV 74 (354)
T ss_dssp CCEEEECS
T ss_pred CCEEEEeC
Confidence 88888764
No 91
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=79.24 E-value=5.5 Score=35.56 Aligned_cols=67 Identities=15% Similarity=0.189 Sum_probs=39.6
Q ss_pred CeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh-C
Q 023530 128 KYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-N 204 (281)
Q Consensus 128 ~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~-~ 204 (281)
|+||+|++.|. |.. +.+|.. .+ ..++++|.... ...+.+.|+++|++..+- +.+ ++++ +
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~---~~--~~~~~~v~d~~----~~~~~~~~~~~~~~~~~~-----~~~----~~l~~~ 62 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHT---SG--EYQLVAIYSRK----LETAATFASRYQNIQLFD-----QLE----VFFKSS 62 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH---TT--SEEEEEEECSS----HHHHHHHGGGSSSCEEES-----CHH----HHHTSS
T ss_pred CeEEEEEeCCHHHHHHHHHHHh---CC--CeEEEEEEeCC----HHHHHHHHHHcCCCeEeC-----CHH----HHhCCC
Confidence 57999999987 332 233322 12 36888776543 234567788888754431 122 3334 7
Q ss_pred CCEEEEec
Q 023530 205 TDFLVLAR 212 (281)
Q Consensus 205 ~DlIVLAg 212 (281)
+|+|++|-
T Consensus 63 ~D~V~i~t 70 (325)
T 2ho3_A 63 FDLVYIAS 70 (325)
T ss_dssp CSEEEECS
T ss_pred CCEEEEeC
Confidence 88888874
No 92
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=79.23 E-value=1.5 Score=35.52 Aligned_cols=35 Identities=29% Similarity=0.464 Sum_probs=31.1
Q ss_pred EEEEEEcC---CCcchHHHHHHHHHhCCCeEeEeeeec
Q 023530 43 GIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFV 77 (281)
Q Consensus 43 ~iltV~G~---DrpGIVa~VS~~La~~giNI~dl~q~~ 77 (281)
-.|++.|+ |-.||++++|+.|+++|+.|--++++-
T Consensus 63 r~i~v~~~l~~~~vGilA~is~pLA~agIsif~iSty~ 100 (134)
T 1zhv_A 63 SCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVSTFD 100 (134)
T ss_dssp EEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEECSS
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 36778777 889999999999999999999999874
No 93
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=78.73 E-value=5 Score=38.59 Aligned_cols=66 Identities=15% Similarity=0.150 Sum_probs=44.2
Q ss_pred ccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeeccC-CCC--eEEEEEEEEeCCCCCCHHHHHHHHHHHhhh
Q 023530 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE-KKN--VFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (281)
Q Consensus 41 ~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~~~-~~g--~F~mrlev~~p~~~~~~~~L~~~L~~la~~ 112 (281)
.+..|.+.-+|+||-.+++-+.++.+|+|+..+++.-.. ..+ .|++ +++ . .+-+.++++|+++...
T Consensus 33 dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfV--D~e-h---~~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 33 GAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFT--YLD-K---RTKPVLGSIIKSLRND 101 (429)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEE--CBC-G---GGHHHHHHHHHHHHHT
T ss_pred CeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEE--EEe-e---CCCHHHHHHHHHHHhh
Confidence 344444445899999999999999999999999985321 123 3443 332 1 1335577888777544
No 94
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=78.63 E-value=7.9 Score=36.47 Aligned_cols=68 Identities=16% Similarity=0.195 Sum_probs=40.0
Q ss_pred CCeeEEEEee----CC-hhH-HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCC--EEEeCCCCCChHHHH
Q 023530 127 PKYKVAVLAS----KQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEEL 198 (281)
Q Consensus 127 ~~~rIavl~S----g~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP--~~~i~~k~~~~e~~l 198 (281)
.++||+|++. |. |.. +.+|.. .. + .+++++|.... ...+.+.|+++|+| ..+ . + +
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~-~~-~--~~~lvav~d~~----~~~~~~~a~~~g~~~~~~~-~----~----~ 81 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQ-LS-S--QFQITALYSPK----IETSIATIQRLKLSNATAF-P----T----L 81 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHH-TT-T--TEEEEEEECSS----HHHHHHHHHHTTCTTCEEE-S----S----H
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHh-cC-C--CeEEEEEEeCC----HHHHHHHHHHcCCCcceee-C----C----H
Confidence 4579999999 55 333 343332 11 2 36888876543 23467788999997 222 1 1 2
Q ss_pred HHHHh--CCCEEEEe
Q 023530 199 LELVQ--NTDFLVLA 211 (281)
Q Consensus 199 ~~~L~--~~DlIVLA 211 (281)
.++|+ ++|+|++|
T Consensus 82 ~~ll~~~~vD~V~i~ 96 (438)
T 3btv_A 82 ESFASSSTIDMIVIA 96 (438)
T ss_dssp HHHHHCSSCSEEEEC
T ss_pred HHHhcCCCCCEEEEe
Confidence 24454 57777776
No 95
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=78.46 E-value=8.1 Score=37.05 Aligned_cols=49 Identities=6% Similarity=0.101 Sum_probs=29.8
Q ss_pred CCeeEEEEeeC----C-hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCC
Q 023530 127 PKYKVAVLASK----Q-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (281)
Q Consensus 127 ~~~rIavl~Sg----~-Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP 183 (281)
+++||+|++.| . |. -+.+|.. .. + .+++++|.... ...+.+.|+++|+|
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~-~~-~--~~~lvav~d~~----~~~a~~~a~~~g~~ 92 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQ-LS-S--QFQIVALYNPT----LKSSLQTIEQLQLK 92 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHH-TT-T--TEEEEEEECSC----HHHHHHHHHHTTCT
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHh-cC-C--CeEEEEEEeCC----HHHHHHHHHHcCCC
Confidence 35799999993 3 22 2333322 10 2 36888876543 23567788999997
No 96
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=78.11 E-value=3.1 Score=38.99 Aligned_cols=72 Identities=6% Similarity=0.056 Sum_probs=40.7
Q ss_pred CCeeEEEEeeCChh-----HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCC--EEEeCCCCCChHHHHH
Q 023530 127 PKYKVAVLASKQEH-----CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELL 199 (281)
Q Consensus 127 ~~~rIavl~Sg~Gs-----nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP--~~~i~~k~~~~e~~l~ 199 (281)
+++||+|++.|.++ -+.++.. .+ .+++++.++++ ....+.+.|+++|+| ..+ .+.+ +++
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~---~~--~~~lva~v~d~---~~~~a~~~a~~~g~~~~~~~-----~~~~-~ll 101 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARL---DD--HYELVAGALSS---TPEKAEASGRELGLDPSRVY-----SDFK-EMA 101 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHH---TS--CEEEEEEECCS---SHHHHHHHHHHHTCCGGGBC-----SCHH-HHH
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhh---CC--CcEEEEEEeCC---CHHHHHHHHHHcCCCccccc-----CCHH-HHH
Confidence 46799999999732 1222221 23 26788755654 234567889999997 222 1233 333
Q ss_pred HHH----hCCCEEEEec
Q 023530 200 ELV----QNTDFLVLAR 212 (281)
Q Consensus 200 ~~L----~~~DlIVLAg 212 (281)
+.- .++|+|+++-
T Consensus 102 ~~~~~~~~~vD~V~I~t 118 (417)
T 3v5n_A 102 IREAKLKNGIEAVAIVT 118 (417)
T ss_dssp HHHHHCTTCCSEEEECS
T ss_pred hcccccCCCCcEEEECC
Confidence 321 1589888874
No 97
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=77.25 E-value=3.9 Score=34.68 Aligned_cols=67 Identities=12% Similarity=0.132 Sum_probs=40.3
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~D 206 (281)
++||+|++.|. |+.+-..+.+ .| .+|.++ .++ ....+.++++++|+.... + . . +.++++|
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~--~g---~~V~~v-~~r---~~~~~~~l~~~~g~~~~~-~----~-~----~~~~~aD 83 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTA--AQ---IPAIIA-NSR---GPASLSSVTDRFGASVKA-V----E-L----KDALQAD 83 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHH--TT---CCEEEE-CTT---CGGGGHHHHHHHTTTEEE-C----C-H----HHHTTSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CC---CEEEEE-ECC---CHHHHHHHHHHhCCCccc-C----h-H----HHHhcCC
Confidence 57999999988 5544333332 24 366543 554 233456678888876543 1 1 1 2345899
Q ss_pred EEEEecc
Q 023530 207 FLVLARY 213 (281)
Q Consensus 207 lIVLAgY 213 (281)
+|++|=-
T Consensus 84 vVilavp 90 (220)
T 4huj_A 84 VVILAVP 90 (220)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 9999843
No 98
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=76.92 E-value=4.5 Score=34.91 Aligned_cols=68 Identities=10% Similarity=0.047 Sum_probs=41.2
Q ss_pred CCCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh-
Q 023530 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (281)
Q Consensus 126 ~~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~- 203 (281)
+...|++|.+.|+ |. +++....... ..++++++.+.|++.. ....|+|+...+ ++.+.++
T Consensus 78 ~~~~rV~IIGaG~~G~---~la~~~~~~~-g~~iVg~~D~dp~k~g------~~i~gv~V~~~~--------dl~ell~~ 139 (211)
T 2dt5_A 78 NRKWGLCIVGMGRLGS---ALADYPGFGE-SFELRGFFDVDPEKVG------RPVRGGVIEHVD--------LLPQRVPG 139 (211)
T ss_dssp TSCEEEEEECCSHHHH---HHHHCSCCCS-SEEEEEEEESCTTTTT------CEETTEEEEEGG--------GHHHHSTT
T ss_pred CCCCEEEEECccHHHH---HHHHhHhhcC-CcEEEEEEeCCHHHHh------hhhcCCeeecHH--------hHHHHHHc
Confidence 4567899998887 43 3444322234 6899999987654211 123467766532 2445555
Q ss_pred CCCEEEEe
Q 023530 204 NTDFLVLA 211 (281)
Q Consensus 204 ~~DlIVLA 211 (281)
++|.|++|
T Consensus 140 ~ID~ViIA 147 (211)
T 2dt5_A 140 RIEIALLT 147 (211)
T ss_dssp TCCEEEEC
T ss_pred CCCEEEEe
Confidence 68888887
No 99
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=76.86 E-value=8.9 Score=29.56 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=24.0
Q ss_pred CCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCC
Q 023530 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHD 166 (281)
Q Consensus 126 ~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~p 166 (281)
..++|++|+++|.- -+.+++.++... ..++++++.+.+
T Consensus 2 ~~~~~vlIiGaG~~--g~~l~~~l~~~~-g~~vvg~~d~~~ 39 (141)
T 3nkl_A 2 NAKKKVLIYGAGSA--GLQLANMLRQGK-EFHPIAFIDDDR 39 (141)
T ss_dssp -CCEEEEEECCSHH--HHHHHHHHHHSS-SEEEEEEECSCG
T ss_pred CCCCEEEEECCCHH--HHHHHHHHHhCC-CcEEEEEEECCc
Confidence 45678999988762 233444443332 479999998763
No 100
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=76.64 E-value=8.4 Score=29.98 Aligned_cols=71 Identities=15% Similarity=0.224 Sum_probs=42.4
Q ss_pred CCCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh-
Q 023530 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (281)
Q Consensus 126 ~~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~- 203 (281)
..+.+|+|++.|. |..+-..+.. .| .++.++-.| + ...+.+++.|+++.+-+.. .+ +.++...
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~--~g---~~v~vid~~-~-----~~~~~~~~~g~~~i~gd~~---~~-~~l~~a~i 69 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLA--SD---IPLVVIETS-R-----TRVDELRERGVRAVLGNAA---NE-EIMQLAHL 69 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHH--TT---CCEEEEESC-H-----HHHHHHHHTTCEEEESCTT---SH-HHHHHTTG
T ss_pred cCCCCEEEECcCHHHHHHHHHHHH--CC---CCEEEEECC-H-----HHHHHHHHcCCCEEECCCC---CH-HHHHhcCc
Confidence 3456899999988 6555554443 34 466655444 2 2355667789988775421 12 3333333
Q ss_pred -CCCEEEEe
Q 023530 204 -NTDFLVLA 211 (281)
Q Consensus 204 -~~DlIVLA 211 (281)
++|++|++
T Consensus 70 ~~ad~vi~~ 78 (140)
T 3fwz_A 70 ECAKWLILT 78 (140)
T ss_dssp GGCSEEEEC
T ss_pred ccCCEEEEE
Confidence 78888876
No 101
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=75.20 E-value=2.8 Score=38.42 Aligned_cols=67 Identities=12% Similarity=0.156 Sum_probs=38.7
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~-- 203 (281)
+++||+|.+.|. |......+.. .+ .+++++|....+ ...+.|+++|++++. + +.++++
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~--~~--~~~l~av~d~~~-----~~~~~a~~~g~~~~~------~----~~~ll~~~ 64 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASA--AD--NLEVHGVFDILA-----EKREAAAQKGLKIYE------S----YEAVLADE 64 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHT--ST--TEEEEEEECSSH-----HHHHHHHTTTCCBCS------C----HHHHHHCT
T ss_pred CcCcEEEECcCHHHHHHHHHHHh--CC--CcEEEEEEcCCH-----HHHHHHHhcCCceeC------C----HHHHhcCC
Confidence 357999999987 3322222222 12 378888766432 223567888886431 2 224454
Q ss_pred CCCEEEEec
Q 023530 204 NTDFLVLAR 212 (281)
Q Consensus 204 ~~DlIVLAg 212 (281)
++|+|++|-
T Consensus 65 ~~D~V~i~t 73 (359)
T 3e18_A 65 KVDAVLIAT 73 (359)
T ss_dssp TCCEEEECS
T ss_pred CCCEEEEcC
Confidence 688888763
No 102
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=74.40 E-value=4.3 Score=35.21 Aligned_cols=93 Identities=11% Similarity=-0.030 Sum_probs=52.5
Q ss_pred CCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh-
Q 023530 125 IDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (281)
Q Consensus 125 ~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~- 203 (281)
.+++.|++|.+.|+- =++|+..........++++++-+.|. + .-+. +.-.|+|++..+ ++.+.++
T Consensus 81 ~~~~~~V~IvGaG~l--G~aLa~~~~~~~~g~~iVg~~D~dp~-~-kiG~--~~i~GvpV~~~~--------dL~~~v~~ 146 (212)
T 3keo_A 81 DHSTTNVMLVGCGNI--GRALLHYRFHDRNKMQISMAFDLDSN-D-LVGK--TTEDGIPVYGIS--------TINDHLID 146 (212)
T ss_dssp TTSCEEEEEECCSHH--HHHHTTCCCCTTSSEEEEEEEECTTS-T-TTTC--BCTTCCBEEEGG--------GHHHHC-C
T ss_pred CCCCCEEEEECcCHH--HHHHHHhhhcccCCeEEEEEEeCCch-h-ccCc--eeECCeEEeCHH--------HHHHHHHH
Confidence 345678999888762 23455542222335899999987643 0 1111 124689998743 3667777
Q ss_pred -CCCEEEEec---ccccCChhHHhhhcCCcee
Q 023530 204 -NTDFLVLAR---YMQPVPLQKEAYLGYKLLE 231 (281)
Q Consensus 204 -~~DlIVLAg---YMrILs~~fl~~~~~riIN 231 (281)
++|.+++|- -.+-+-+.+++.==..|+|
T Consensus 147 ~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~n 178 (212)
T 3keo_A 147 SDIETAILTVPSTEAQEVADILVKAGIKGILS 178 (212)
T ss_dssp CSCCEEEECSCGGGHHHHHHHHHHHTCCEEEE
T ss_pred cCCCEEEEecCchhHHHHHHHHHHcCCCEEEE
Confidence 799999983 1121222233333356777
No 103
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=73.99 E-value=21 Score=25.81 Aligned_cols=73 Identities=16% Similarity=0.257 Sum_probs=39.3
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCC
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~ 205 (281)
.++||+|++.|. |+.+-..+.. .| ..+|.++ ..++ .-.+.+...++.+...+-. ..+.+.+.++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~--~g--~~~v~~~-~r~~-----~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~ 70 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT--SS--NYSVTVA-DHDL-----AALAVLNRMGVATKQVDAK---DEAGLAKALGGF 70 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH--CS--SEEEEEE-ESCH-----HHHHHHHTTTCEEEECCTT---CHHHHHHHTTTC
T ss_pred CcCeEEEECCCHHHHHHHHHHHh--CC--CceEEEE-eCCH-----HHHHHHHhCCCcEEEecCC---CHHHHHHHHcCC
Confidence 357899888854 3333322221 34 2455433 2221 2233444677777665521 234566777799
Q ss_pred CEEEEec
Q 023530 206 DFLVLAR 212 (281)
Q Consensus 206 DlIVLAg 212 (281)
|+||.+-
T Consensus 71 d~vi~~~ 77 (118)
T 3ic5_A 71 DAVISAA 77 (118)
T ss_dssp SEEEECS
T ss_pred CEEEECC
Confidence 9998764
No 104
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=73.86 E-value=4.8 Score=38.75 Aligned_cols=37 Identities=8% Similarity=0.037 Sum_probs=32.4
Q ss_pred cccEEEEEEc---CCCcchHHHHHHHHHhCCCeEeEeeee
Q 023530 40 LTHGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVF 76 (281)
Q Consensus 40 ~~~~iltV~G---~DrpGIVa~VS~~La~~giNI~dl~q~ 76 (281)
..-..|++.| +++||+.++|-+.|+++|+||.-+.|.
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~ 355 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQG 355 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEec
Confidence 3456889998 678899999999999999999999984
No 105
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=73.25 E-value=8.5 Score=32.37 Aligned_cols=56 Identities=16% Similarity=0.014 Sum_probs=39.8
Q ss_pred CeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCC-ChhHHHHHHhCCCCEEEeC
Q 023530 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 128 ~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~-~a~~~~~A~~~gIP~~~i~ 188 (281)
+.||+|..||+- +.+-.++.. .| .++.++..|+...+ -..+.+.|+++|||+++++
T Consensus 6 ~~kv~v~~SGG~DS~~ll~ll~~--~g---~~v~~~~v~~~~~~~~~~~~~~a~~lgi~~~~~~ 64 (203)
T 3k32_A 6 LMDVHVLFSGGKDSSLSAVILKK--LG---YNPHLITINFGVIPSYKLAEETAKILGFKHKVIT 64 (203)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHH--TT---EEEEEEEEECSSSCTTHHHHHHHHHHTCEEEEEE
T ss_pred CCeEEEEEECcHHHHHHHHHHHH--cC---CCeEEEEEeCCCchHHHHHHHHHHHhCCCEEEEE
Confidence 468999999983 444444442 23 57888887774332 2467889999999999987
No 106
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=73.11 E-value=9.3 Score=36.34 Aligned_cols=80 Identities=15% Similarity=0.217 Sum_probs=53.2
Q ss_pred CCCeeEEEEeeCC--hhHHHHHHHhhhcCCCCeeEEEEEe-CCCCCCChhHHHHHHhCCCCEEEeCCCC------CC---
Q 023530 126 DPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVIS-NHDRGPNSHVIRFLERHGIPYHYLCAKE------NE--- 193 (281)
Q Consensus 126 ~~~~rIavl~Sg~--GsnL~aLl~~~~~g~l~~eI~~Vis-n~pd~~~a~~~~~A~~~gIP~~~i~~k~------~~--- 193 (281)
+.|+||+||+|.+ |++--+++.+..+ ..+|+++.. ++ .-....+-|++++-.+..+.... .+
T Consensus 19 ~~mk~i~ILGSTGSIGtqtLdVi~~~pd---~f~V~aLaa~g~---nv~~L~~q~~~f~p~~v~v~d~~~~~~~~~~v~~ 92 (398)
T 2y1e_A 19 DGRLRVVVLGSTGSIGTQALQVIADNPD---RFEVVGLAAGGA---HLDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYH 92 (398)
T ss_dssp -CCEEEEEESTTSHHHHHHHHHHHHCTT---TEEEEEEEECSS---CHHHHHHHHHHHCCCCEEESCHHHHHHHCCCSEE
T ss_pred CCceEEEEEccCcHHHHHHHHHHHhCCC---ceEEEEEEecCC---CHHHHHHHHHHcCCCEEEEcCHHHhhhcCCEEEe
Confidence 4478999999987 5666667776322 479999888 64 22356778899998777765211 00
Q ss_pred hHHHHHHHHh--CCCEEEEe
Q 023530 194 REEELLELVQ--NTDFLVLA 211 (281)
Q Consensus 194 ~e~~l~~~L~--~~DlIVLA 211 (281)
-++.+.++.. ++|+||-|
T Consensus 93 G~~~l~~~a~~~~~D~Vv~A 112 (398)
T 2y1e_A 93 GSDAATRLVEQTEADVVLNA 112 (398)
T ss_dssp STTHHHHHHHHSCCSEEEEC
T ss_pred cHHHHHHHhcCCCCCEEEEe
Confidence 1245666665 69999876
No 107
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=72.92 E-value=13 Score=27.52 Aligned_cols=58 Identities=17% Similarity=0.067 Sum_probs=45.7
Q ss_pred HHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEe
Q 023530 102 MDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (281)
Q Consensus 102 L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Vis 163 (281)
+|.....+|.++|+..|..+..+- +|-+.+.|....++++++.++.|.-++.|.-|-.
T Consensus 17 FR~~v~~~A~~lgl~G~V~N~~dG----~Vei~~eG~~~~i~~f~~~l~~~~p~a~V~~v~~ 74 (91)
T 2fhm_A 17 FRYFVQMEADKRKLAGWVKNRDDG----RVEILAEGPENALQSFVEAVKNGSPFSKVTDISV 74 (91)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTS----CEEEEEEECHHHHHHHHHHHHTTCSSSEEEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEEECCCC----cEEEEEEeCHHHHHHHHHHHHhCCCccEEEEEEE
Confidence 688888999999999986543322 6888999998899999999888765578876643
No 108
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=72.83 E-value=15 Score=33.46 Aligned_cols=73 Identities=12% Similarity=0.101 Sum_probs=42.3
Q ss_pred CCCeeEEEEe-eCC-hhH--H----HHHHHhhhcCCC------CeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCC
Q 023530 126 DPKYKVAVLA-SKQ-EHC--L----VDFLYGWQEGKL------PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE 191 (281)
Q Consensus 126 ~~~~rIavl~-Sg~-Gsn--L----~aLl~~~~~g~l------~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~ 191 (281)
.+++||+|++ .|. |.. + .++... +.+ ...+...++++ ....+.+.|+++|+|..+-
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~---~~~~l~~~~~~~~~~av~~~---~~~~a~~~a~~~~~~~~~~---- 73 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQ---GGVRLKNGDRIMPDPILVGR---SAEKVEALAKRFNIARWTT---- 73 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHH---TSEECTTSCEEEEEEEEECS---SSHHHHHHHHHTTCCCEES----
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhc---CceeecCCcccceeeEEEcC---CHHHHHHHHHHhCCCcccC----
Confidence 4578999999 888 332 3 444432 211 11111145554 2345788899999984441
Q ss_pred CChHHHHHHHHh--CCCEEEEecc
Q 023530 192 NEREEELLELVQ--NTDFLVLARY 213 (281)
Q Consensus 192 ~~~e~~l~~~L~--~~DlIVLAgY 213 (281)
+ +.++|+ ++|+|++|.-
T Consensus 74 -~----~~~ll~~~~iD~V~i~tp 92 (383)
T 3oqb_A 74 -D----LDAALADKNDTMFFDAAT 92 (383)
T ss_dssp -C----HHHHHHCSSCCEEEECSC
T ss_pred -C----HHHHhcCCCCCEEEECCC
Confidence 2 235555 6888888754
No 109
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=72.17 E-value=7.1 Score=31.55 Aligned_cols=60 Identities=10% Similarity=-0.106 Sum_probs=41.5
Q ss_pred CcccEEEEEEc---CCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHh
Q 023530 39 TLTHGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (281)
Q Consensus 39 ~~~~~iltV~G---~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la 110 (281)
...-..+++.| +|+||+.+++-+.|+++|+||.-+.|.. . .+.+.++.. + .+++.++++.
T Consensus 15 ~~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~~s~---~-----~Isf~v~~~--~--~~~~il~~l~ 77 (157)
T 3mah_A 15 KDGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVATSE---V-----GVSLTIDND--K--NLPDIVRALS 77 (157)
T ss_dssp EEEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEECCS---S-----EEEEEESCC--T--THHHHHHHHT
T ss_pred cCCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEEecC---C-----EEEEEECCh--H--HHHHHHHHHh
Confidence 34556788885 4789999999999999999998888732 1 455555542 2 3445555543
No 110
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=71.87 E-value=22 Score=27.64 Aligned_cols=68 Identities=13% Similarity=0.053 Sum_probs=48.0
Q ss_pred CCCcccEEEEEEcCCCcchHHHHHHHHHhC---CCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhh
Q 023530 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASR---GGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (281)
Q Consensus 37 ~~~~~~~iltV~G~DrpGIVa~VS~~La~~---giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~ 111 (281)
-..+..|-+.|+|++.++.+++|..++.++ +..+ ..+ .+..|.|. -+.+.+.. .+.+++.+-++++.+
T Consensus 31 ieFPc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r---~Ss~GkY~-Svtv~v~v--~S~eQv~aiY~~L~~ 101 (109)
T 1rwu_A 31 LEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVK---PSSKGNYH-SVSITINA--THIEQVETLYEELGK 101 (109)
T ss_dssp SCCCCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEE---ESSCSSEE-EEEEEECC--SSHHHHHHHHHHHSC
T ss_pred ccCCCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eec---CCCCCeEE-EEEEEEEE--CCHHHHHHHHHHHhc
Confidence 345578999999999999999999999988 6666 222 23478875 34444442 357777777766653
No 111
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=71.08 E-value=4.5 Score=32.66 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=30.5
Q ss_pred EEEEEEcC---CCcchHHHHHHHHHhCCCeEeEeeeec
Q 023530 43 GIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFV 77 (281)
Q Consensus 43 ~iltV~G~---DrpGIVa~VS~~La~~giNI~dl~q~~ 77 (281)
-.|++.|+ |-.||+++|+..|+++|+.|--+++|-
T Consensus 72 r~i~l~~~~~l~~vGi~a~is~~LA~agIsif~iSty~ 109 (133)
T 1zvp_A 72 SLITLTVHSSLEAVGLTAAFATKLAEHGISANVIAGYY 109 (133)
T ss_dssp EEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEEECSS
T ss_pred EEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 36677664 999999999999999999999999874
No 112
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=70.81 E-value=14 Score=32.72 Aligned_cols=47 Identities=15% Similarity=0.160 Sum_probs=29.9
Q ss_pred CeeEEEEeeCC-hh--HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCC
Q 023530 128 KYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (281)
Q Consensus 128 ~~rIavl~Sg~-Gs--nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP 183 (281)
++||+|++.|. |. .+.+|.. .+ .+++++|....+ ..+.+.|+++|+|
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~---~~--~~~lvav~d~~~----~~~~~~~~~~g~~ 54 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAA---AS--DWTLQGAWSPTR----AKALPICESWRIP 54 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHS---CS--SEEEEEEECSSC----TTHHHHHHHHTCC
T ss_pred cceEEEECCCHHHHHHHHHHHHh---CC--CeEEEEEECCCH----HHHHHHHHHcCCC
Confidence 57999999987 43 2333322 12 368887766442 2356778888987
No 113
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=70.16 E-value=13 Score=33.79 Aligned_cols=79 Identities=13% Similarity=0.136 Sum_probs=45.6
Q ss_pred CeeEEEEeeCC-hhHHH--HHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCC--------Ch-
Q 023530 128 KYKVAVLASKQ-EHCLV--DFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKEN--------ER- 194 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~--aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~--------~~- 194 (281)
++||.|.+.|+ ||... +|.+..++- ..+|..|-+.+ . .-.++..+.|+|++.++ .... +.
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~--g~~V~~vg~~~---g--~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~ 74 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQAR--GYAVHWLGTPR---G--IENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAP 74 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEECSS---S--THHHHTGGGTCCEEECC--------------CH
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhC--CCEEEEEECCc---h--HhhchhhhcCCcEEEEECCCcCCCCHHHHHHHH
Confidence 46899888887 56543 345555442 26887665543 1 11346778899999987 2211 00
Q ss_pred -H-----HHHHHHHh--CCCEEEEecc
Q 023530 195 -E-----EELLELVQ--NTDFLVLARY 213 (281)
Q Consensus 195 -e-----~~l~~~L~--~~DlIVLAgY 213 (281)
. .+..++++ +||+||.-|.
T Consensus 75 ~~~~~~~~~~~~~l~~~~PDvVi~~g~ 101 (365)
T 3s2u_A 75 LELLKSLFQALRVIRQLRPVCVLGLGG 101 (365)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEECSS
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 0 12344555 8999997543
No 114
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=69.38 E-value=8.8 Score=36.68 Aligned_cols=60 Identities=15% Similarity=0.105 Sum_probs=42.9
Q ss_pred CeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCC-CC-----hhHHHHHHhCCCCEEEeC
Q 023530 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-PN-----SHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 128 ~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~-~~-----a~~~~~A~~~gIP~~~i~ 188 (281)
..||+|.+||+- ++|-.++..... ....++.+|..||.-+ ++ ..+.++|+++|||+++++
T Consensus 18 ~~~vlVa~SGG~DS~~Ll~ll~~~~~-~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v~~ 85 (464)
T 3a2k_A 18 GAAVIVGVSGGPDSLALLHVFLSLRD-EWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQ 85 (464)
T ss_dssp SSBEEEECCSSHHHHHHHHHHHHHHH-TTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEEcCcHHHHHHHHHHHHHHH-HcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEEEE
Confidence 458999999983 566666665432 2346888888898543 11 257889999999999876
No 115
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=68.72 E-value=12 Score=28.65 Aligned_cols=69 Identities=19% Similarity=0.258 Sum_probs=38.4
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--C
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~--~ 204 (281)
+++|+|++.|. |..+-..+.. .| .+|.++-.| + ...+.+++.|+++...+.. .+ +.++.+. +
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~--~g---~~V~~id~~-~-----~~~~~~~~~~~~~~~gd~~---~~-~~l~~~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA--AG---KKVLAVDKS-K-----EKIELLEDEGFDAVIADPT---DE-SFYRSLDLEG 70 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TT---CCEEEEESC-H-----HHHHHHHHTTCEEEECCTT---CH-HHHHHSCCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CC---CeEEEEECC-H-----HHHHHHHHCCCcEEECCCC---CH-HHHHhCCccc
Confidence 56899998876 4444333332 34 466644333 2 2345566778877775521 12 2333333 7
Q ss_pred CCEEEEe
Q 023530 205 TDFLVLA 211 (281)
Q Consensus 205 ~DlIVLA 211 (281)
+|+||++
T Consensus 71 ~d~vi~~ 77 (141)
T 3llv_A 71 VSAVLIT 77 (141)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 8988875
No 116
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=68.71 E-value=21 Score=26.23 Aligned_cols=59 Identities=19% Similarity=0.132 Sum_probs=45.5
Q ss_pred HHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEe
Q 023530 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (281)
Q Consensus 101 ~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Vis 163 (281)
-+|.-...+|.++|+..|..+..+ - +|-+.+.|....++++++.++.|.-.+.|.-|-.
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~d--G--~Vei~~eG~~~~i~~f~~~l~~gP~~a~V~~v~~ 74 (88)
T 1ulr_A 16 GYRAFAQKKALELGLSGYAENLPD--G--RVEVVAEGPKEALELFLHHLKQGPRLARVEAVEV 74 (88)
T ss_dssp SHHHHHHHHHHHTTCEEEEEECTT--S--CEEEEEESCHHHHHHHHHHHHHCSTTCEEEEEEE
T ss_pred CHHHHHHHHHHHcCCeEEEEECCC--C--cEEEEEEeCHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 368888899999999998654322 2 6889999999899999998887754477766643
No 117
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=68.61 E-value=27 Score=30.51 Aligned_cols=78 Identities=6% Similarity=0.016 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hh
Q 023530 98 PREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SH 172 (281)
Q Consensus 98 ~~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~ 172 (281)
+.+++.+++.....++ +. .....+++|..||+- +.+-.++... -| .++.+|..+++..+. ..
T Consensus 5 ~~~~~~~~l~~~l~d~-v~--------~~g~~~vvv~lSGGiDSsv~a~l~~~~-~g---~~v~av~~~~~~~~~~~~~~ 71 (249)
T 3p52_A 5 DWQKITEKMCDFIQEK-VK--------NSQSQGVVLGLSGGIDSALVATLCKRA-LK---ENVFALLMPTQISNKANLED 71 (249)
T ss_dssp CHHHHHHHHHHHHHHH-HH--------TSSCSEEEEECCSSHHHHHHHHHHHHH-HT---TSEEEEECCSCCSSCHHHHH
T ss_pred CHHHHHHHHHHHHHHH-HH--------HhCCCCEEEEcCCCHHHHHHHHHHHHH-cC---CcEEEEEecCCCCCHHHHHH
Confidence 5556666665544433 11 123458999999983 4444444432 24 468888877632212 25
Q ss_pred HHHHHHhCCCCEEEeC
Q 023530 173 VIRFLERHGIPYHYLC 188 (281)
Q Consensus 173 ~~~~A~~~gIP~~~i~ 188 (281)
+.+.|+..|||++.++
T Consensus 72 a~~~a~~lgi~~~~v~ 87 (249)
T 3p52_A 72 ALRLCADLNLEYKIIE 87 (249)
T ss_dssp HHHHHHHHTCEEEECC
T ss_pred HHHHHHHhCCCEEEEE
Confidence 7889999999999987
No 118
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=68.55 E-value=7.1 Score=35.60 Aligned_cols=66 Identities=14% Similarity=0.050 Sum_probs=38.2
Q ss_pred CeeEEEEeeCC-hh-H-HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh-
Q 023530 128 KYKVAVLASKQ-EH-C-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (281)
Q Consensus 128 ~~rIavl~Sg~-Gs-n-L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~- 203 (281)
++||+|++.|. |. . +.+|.. .+ .+++++|.... ...+.+.|++++.+..+- + +.++|+
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~---~~--~~~l~av~d~~----~~~~~~~a~~~~~~~~~~-----~----~~~ll~~ 66 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQ---MQ--DIRIVAACDSD----LERARRVHRFISDIPVLD-----N----VPAMLNQ 66 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHT---CT--TEEEEEEECSS----HHHHGGGGGTSCSCCEES-----S----HHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHh---CC--CcEEEEEEcCC----HHHHHHHHHhcCCCcccC-----C----HHHHhcC
Confidence 57999999998 43 2 344432 12 36888776643 223455666665443331 2 224454
Q ss_pred -CCCEEEEe
Q 023530 204 -NTDFLVLA 211 (281)
Q Consensus 204 -~~DlIVLA 211 (281)
++|+|+++
T Consensus 67 ~~vD~V~i~ 75 (359)
T 3m2t_A 67 VPLDAVVMA 75 (359)
T ss_dssp SCCSEEEEC
T ss_pred CCCCEEEEc
Confidence 67888876
No 119
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=68.52 E-value=24 Score=33.83 Aligned_cols=81 Identities=14% Similarity=0.059 Sum_probs=50.5
Q ss_pred EEEEEEc---CCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHH-HHHHHHHHHhhhhcccce
Q 023530 43 GIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPRE-QMDEDFFKLSKMFNAMRS 118 (281)
Q Consensus 43 ~iltV~G---~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~-~L~~~L~~la~~l~l~~~ 118 (281)
..|++.+ +|+||+.++|-+.|+++|+||.-+.+.. . .+.+.++ .. +.+ .+++.++++.++++.+.
T Consensus 299 ~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~~~~---~---~is~~V~--~~--d~~~~~~~~~~el~~~~~~~~- 367 (446)
T 3tvi_A 299 TVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPSGV---D---SVSLVIE--DC--KLDGKCDKIIEEIKKQCNPDS- 367 (446)
T ss_dssp EEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBCEET---T---EEEEEEE--HH--HHTTTHHHHHHHHHHHSCCSE-
T ss_pred EEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEecCC---C---EEEEEEe--cc--hHHHHHHHHHHHHHHhcCCCc-
Confidence 4688887 5899999999999999999999887632 1 2223333 21 122 34455566666655331
Q ss_pred eeeecCCCCCeeEEEEeeC
Q 023530 119 VVRVPDIDPKYKVAVLASK 137 (281)
Q Consensus 119 ~~~~~~~~~~~rIavl~Sg 137 (281)
+.+ ....-+|++.+.|
T Consensus 368 -v~v--~~~vA~VSvVG~g 383 (446)
T 3tvi_A 368 -IEI--HPNMALVATVGTG 383 (446)
T ss_dssp -EEE--EEEEEEEEEECGG
T ss_pred -EEE--eCCeEEEEEECCC
Confidence 222 2334578887776
No 120
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=67.97 E-value=12 Score=36.03 Aligned_cols=58 Identities=9% Similarity=-0.002 Sum_probs=41.6
Q ss_pred CCCeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCC---ChhHHHHHHhCCC-CEEEeC
Q 023530 126 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP---NSHVIRFLERHGI-PYHYLC 188 (281)
Q Consensus 126 ~~~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~---~a~~~~~A~~~gI-P~~~i~ 188 (281)
.+..||++..||+- +++-.++.. .| .+|.+|..|+.... -..+.+.|++.|| |+++++
T Consensus 8 ~~~~KVvVA~SGGlDSSvll~~L~e--~G---~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD 71 (455)
T 1k92_A 8 PVGQRIGIAFSGGLDTSAALLWMRQ--KG---AVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 71 (455)
T ss_dssp CTTSEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEE
T ss_pred cCCCeEEEEEcChHHHHHHHHHHHH--cC---CEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEe
Confidence 44569999999983 555555543 24 68989888874321 1468899999999 788876
No 121
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=67.54 E-value=24 Score=34.32 Aligned_cols=83 Identities=13% Similarity=0.179 Sum_probs=53.0
Q ss_pred CCCCeeEEEEeeCC--hhHHHHHHHhhh-cCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCC---------
Q 023530 125 IDPKYKVAVLASKQ--EHCLVDFLYGWQ-EGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKEN--------- 192 (281)
Q Consensus 125 ~~~~~rIavl~Sg~--GsnL~aLl~~~~-~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~--------- 192 (281)
...|+||+||+|.+ |++--+++.+.. ..+ ..+|+++..++ .-....+-|++++-.+.++.....
T Consensus 74 ~~~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd-~f~V~aLaAg~---Nv~lL~eQ~~ef~P~~v~v~d~~~~~~L~~~l~ 149 (488)
T 3au8_A 74 IKKPINVAIFGSTGSIGTNALNIIRECNKIEN-VFNVKALYVNK---SVNELYEQAREFLPEYLCIHDKSVYEELKELVK 149 (488)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHHHHSC-CEEEEEEEESS---CHHHHHHHHHHHCCSEEEESCGGGTHHHHTGGG
T ss_pred hhcceEEEEEccCcHHHHHHHHHHHcccCCCC-eEEEEEEEcCC---CHHHHHHHHHHcCCCEEEEcCHHHHHHHHHHhh
Confidence 34578999999987 566667777632 122 37899888875 224567788999977777752110
Q ss_pred -----C-----hHHHHHHHHh--CCCEEEEe
Q 023530 193 -----E-----REEELLELVQ--NTDFLVLA 211 (281)
Q Consensus 193 -----~-----~e~~l~~~L~--~~DlIVLA 211 (281)
. -++.+.++.. ++|+||-|
T Consensus 150 ~~~~~~~~v~~G~egl~e~a~~~~~D~Vv~A 180 (488)
T 3au8_A 150 NIKDYKPIILCGDEGMKEICSSNSIDKIVIG 180 (488)
T ss_dssp GSTTCCCEEEEHHHHHHHHHHCTTCCEEEEC
T ss_pred hhcCCCceEEeCHHHHHHHhcCCCCCEEEEc
Confidence 0 1345666665 58888875
No 122
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=67.07 E-value=12 Score=30.31 Aligned_cols=80 Identities=11% Similarity=0.099 Sum_probs=45.0
Q ss_pred CCCCeeEEEEeeCCh---hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH
Q 023530 125 IDPKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (281)
Q Consensus 125 ~~~~~rIavl~Sg~G---snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~ 201 (281)
+..|+||.|..+|+- .-.++|+.....+.+.++=+++-... .++..+.+.++++||+.-....+.-. + +.
T Consensus 17 ~~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~g~--~~dp~a~~vl~e~Gidis~h~ar~l~-~----~~ 89 (148)
T 3rh0_A 17 GSHMKSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGTKPAQ--GLNQLSVESIAEVGADMSQGIPKAID-P----EL 89 (148)
T ss_dssp ---CCEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEESSCCS--SCCHHHHHHHHHTTCCCTTCCCCBCC-H----HH
T ss_pred cCCCCEEEEECCCchhHHHHHHHHHHHhcCCCEEEEecccCCCC--CCCHHHHHHHHHcCCCcCCCeeeECC-H----HH
Confidence 455789999999994 44566666654343333333332211 15667889999999985321111111 1 12
Q ss_pred HhCCCEEEEe
Q 023530 202 VQNTDFLVLA 211 (281)
Q Consensus 202 L~~~DlIVLA 211 (281)
+++.|+|+..
T Consensus 90 ~~~~DlIitM 99 (148)
T 3rh0_A 90 LRTVDRVVIL 99 (148)
T ss_dssp HHHCSEEEEE
T ss_pred hcCCCEEEEe
Confidence 3378999986
No 123
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=66.76 E-value=15 Score=33.55 Aligned_cols=71 Identities=13% Similarity=0.088 Sum_probs=37.6
Q ss_pred CCCCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 125 IDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 125 ~~~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
.+++|||+|+++|. |+.+-..|. +. .+|..+--|. .-++.+++ .++...++. .+.+++.+.++
T Consensus 13 ~g~~mkilvlGaG~vG~~~~~~L~---~~---~~v~~~~~~~------~~~~~~~~-~~~~~~~d~---~d~~~l~~~~~ 76 (365)
T 3abi_A 13 EGRHMKVLILGAGNIGRAIAWDLK---DE---FDVYIGDVNN------ENLEKVKE-FATPLKVDA---SNFDKLVEVMK 76 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHT---TT---SEEEEEESCH------HHHHHHTT-TSEEEECCT---TCHHHHHHHHT
T ss_pred cCCccEEEEECCCHHHHHHHHHHh---cC---CCeEEEEcCH------HHHHHHhc-cCCcEEEec---CCHHHHHHHHh
Confidence 47789999999976 443333332 22 3554332221 22344433 345555542 22456777778
Q ss_pred CCCEEEEe
Q 023530 204 NTDFLVLA 211 (281)
Q Consensus 204 ~~DlIVLA 211 (281)
++|+||-+
T Consensus 77 ~~DvVi~~ 84 (365)
T 3abi_A 77 EFELVIGA 84 (365)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEe
Confidence 89988876
No 124
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=66.70 E-value=11 Score=33.26 Aligned_cols=71 Identities=20% Similarity=0.205 Sum_probs=38.2
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~D 206 (281)
++||+|++.|. |+.+-.-+.. .|.-+.+|. ++|+ ......+.++++|+.+.. + ..+.++++|
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~--~g~~~~~V~--v~dr---~~~~~~~l~~~~gi~~~~------~----~~~~~~~aD 65 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA--NGYDPNRIC--VTNR---SLDKLDFFKEKCGVHTTQ------D----NRQGALNAD 65 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH--TTCCGGGEE--EECS---SSHHHHHHHHTTCCEEES------C----HHHHHSSCS
T ss_pred CCEEEEEcccHHHHHHHHHHHH--CCCCCCeEE--EEeC---CHHHHHHHHHHcCCEEeC------C----hHHHHhcCC
Confidence 46899999987 5444332221 342122443 4564 234455566667875321 1 224455788
Q ss_pred EEEEecccc
Q 023530 207 FLVLARYMQ 215 (281)
Q Consensus 207 lIVLAgYMr 215 (281)
+|++|=--+
T Consensus 66 vVilav~p~ 74 (280)
T 3tri_A 66 VVVLAVKPH 74 (280)
T ss_dssp EEEECSCGG
T ss_pred eEEEEeCHH
Confidence 888875333
No 125
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=66.70 E-value=10 Score=33.64 Aligned_cols=64 Identities=13% Similarity=0.158 Sum_probs=37.4
Q ss_pred eeEEEEeeCC-hhH--HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--
Q 023530 129 YKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (281)
Q Consensus 129 ~rIavl~Sg~-Gsn--L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~-- 203 (281)
+||+|++.|. |.. +.+|.. . ..++++|.... ...+.+.|+++|+|..+ + + +.++++
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~----~--~~~~vav~d~~----~~~~~~~~~~~g~~~~~-~----~----~~~~l~~~ 61 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA----T--GGEVVSMMSTS----AERGAAYATENGIGKSV-T----S----VEELVGDP 61 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH----T--TCEEEEEECSC----HHHHHHHHHHTTCSCCB-S----C----HHHHHTCT
T ss_pred CeEEEEcccHHHHHhhhHHhhc----C--CCeEEEEECCC----HHHHHHHHHHcCCCccc-C----C----HHHHhcCC
Confidence 4899999987 433 233332 2 36888776543 23456778889986222 1 1 223444
Q ss_pred CCCEEEEe
Q 023530 204 NTDFLVLA 211 (281)
Q Consensus 204 ~~DlIVLA 211 (281)
++|+|++|
T Consensus 62 ~~D~V~i~ 69 (332)
T 2glx_A 62 DVDAVYVS 69 (332)
T ss_dssp TCCEEEEC
T ss_pred CCCEEEEe
Confidence 57777776
No 126
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=66.11 E-value=13 Score=34.94 Aligned_cols=63 Identities=16% Similarity=0.194 Sum_probs=45.0
Q ss_pred ccEEEEEEcC---CCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhccc
Q 023530 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (281)
Q Consensus 41 ~~~iltV~G~---DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~ 116 (281)
.-.+++++|. ++||+.+++.+.|+++|+||.-.++. .. .+.+-++ .++..++++.+-+.|.++
T Consensus 343 ~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~S-----e~---~is~vV~-----~~d~~~Av~~Lh~~f~~~ 408 (421)
T 3ab4_A 343 QVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTS-----EI---RISVLIR-----EDDLDAAARALHEQFQLG 408 (421)
T ss_dssp CEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEEEEE-----TT---EEEEEEE-----GGGHHHHHHHHHHHTTCC
T ss_pred CeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEEEcC-----CC---eEEEEEe-----HHHHHHHHHHHHHHHhcC
Confidence 4467999996 79999999999999999999866531 11 2223232 345677777777777653
No 127
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=65.14 E-value=16 Score=32.66 Aligned_cols=68 Identities=10% Similarity=-0.012 Sum_probs=36.5
Q ss_pred CCeeEEEEeeC-C-hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHH-
Q 023530 127 PKYKVAVLASK-Q-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV- 202 (281)
Q Consensus 127 ~~~rIavl~Sg-~-Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L- 202 (281)
+|+||+|++.| . |. -+.+|.. . +.++++|..-.++ . ...++.++.+-.+- +.+ ++++.+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~----~--~~~lvav~d~~~~---~--~~~~~~~~~~~~~~-----~~~-~ll~~~~ 64 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKE----V--GGVLVASLDPATN---V--GLVDSFFPEAEFFT-----EPE-AFEAYLE 64 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHH----T--TCEEEEEECSSCC---C--GGGGGTCTTCEEES-----CHH-HHHHHHH
T ss_pred CceEEEEECCChHHHHHHHHHHHh----C--CCEEEEEEcCCHH---H--HHHHhhCCCCceeC-----CHH-HHHHHhh
Confidence 57899999994 3 42 3333332 2 3689988765432 1 13445554333331 222 344332
Q ss_pred ----h--CCCEEEEe
Q 023530 203 ----Q--NTDFLVLA 211 (281)
Q Consensus 203 ----~--~~DlIVLA 211 (281)
+ ++|+|++|
T Consensus 65 ~l~~~~~~vD~V~I~ 79 (312)
T 3o9z_A 65 DLRDRGEGVDYLSIA 79 (312)
T ss_dssp HHHHTTCCCSEEEEC
T ss_pred hhcccCCCCcEEEEC
Confidence 3 78988886
No 128
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=64.02 E-value=22 Score=33.83 Aligned_cols=58 Identities=9% Similarity=0.103 Sum_probs=40.6
Q ss_pred CCCCeeEEEEeeCC--hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 125 IDPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 125 ~~~~~rIavl~Sg~--GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
.+.++||+||+|.+ |++--+++.+..+ ..+|+++..++ .-....+-|++|+-.+.++.
T Consensus 6 ~~~~k~i~ILGSTGSIGtqtLdVi~~~pd---~f~V~aL~ag~---nv~~L~~q~~~f~p~~v~v~ 65 (406)
T 1q0q_A 6 HSGMKQLTILGSTGSIGCSTLDVVRHNPE---HFRVVALVAGK---NVTRMVEQCLEFSPRYAVMD 65 (406)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHCTT---TEEEEEEEESS---CHHHHHHHHHHHCCSEEEES
T ss_pred cCCceeEEEEccCcHHHHHHHHHHHhCCC---ccEEEEEEcCC---CHHHHHHHHHHhCCCEEEEc
Confidence 35678999999987 5666667776322 47899988875 22456778899997777765
No 129
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=63.91 E-value=7.5 Score=33.32 Aligned_cols=66 Identities=17% Similarity=0.320 Sum_probs=36.1
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCC
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~ 205 (281)
.++||+|++.|. |..+-..+.. .| .+| .+.|+ ......+.++++|+.+. . + ..+.++++
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~--~g---~~v--~~~~~---~~~~~~~~~~~~g~~~~--~----~----~~~~~~~~ 61 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQ--TP---HEL--IISGS---SLERSKEIAEQLALPYA--M----S----HQDLIDQV 61 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT--SS---CEE--EEECS---SHHHHHHHHHHHTCCBC--S----S----HHHHHHTC
T ss_pred CccEEEEECCCHHHHHHHHHHHh--CC---CeE--EEECC---CHHHHHHHHHHcCCEee--C----C----HHHHHhcC
Confidence 357999999987 5444332221 23 344 34554 22344556666786531 1 1 22344589
Q ss_pred CEEEEec
Q 023530 206 DFLVLAR 212 (281)
Q Consensus 206 DlIVLAg 212 (281)
|+|+++=
T Consensus 62 D~Vi~~v 68 (259)
T 2ahr_A 62 DLVILGI 68 (259)
T ss_dssp SEEEECS
T ss_pred CEEEEEe
Confidence 9999984
No 130
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=63.86 E-value=28 Score=30.12 Aligned_cols=75 Identities=12% Similarity=0.026 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCCh-hHH-HHHHHhhhcCCCCeeEEEEEeCCCCC-CChhHH
Q 023530 98 PREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCL-VDFLYGWQEGKLPVEITCVISNHDRG-PNSHVI 174 (281)
Q Consensus 98 ~~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~G-snL-~aLl~~~~~g~l~~eI~~Visn~pd~-~~a~~~ 174 (281)
+.+++.+.+.....++ ...+++|..||+- |.+ -.++... .| +.++.+|..++... .-..+.
T Consensus 5 ~~~~~~~~l~~~i~~~-------------~~~~vvv~lSGGiDSs~~~~l~~~~-~g--~~~v~av~~~~~~~~~~~~a~ 68 (257)
T 2e18_A 5 DYDKVIERILEFIREK-------------GNNGVVIGISGGVDSATVAYLATKA-LG--KEKVLGLIMPYFENKDVEDAK 68 (257)
T ss_dssp CHHHHHHHHHHHHHHH-------------CTTCEEEECCSSHHHHHHHHHHHHH-HC--GGGEEEEECCSSCSTHHHHHH
T ss_pred CHHHHHHHHHHHHHHh-------------CCCcEEEEecCCHHHHHHHHHHHHh-cC--CCcEEEEEeCCCCchHHHHHH
Confidence 4556666665554433 2347999999983 443 4444332 22 14687888776321 013578
Q ss_pred HHHHhCCCCEEEeC
Q 023530 175 RFLERHGIPYHYLC 188 (281)
Q Consensus 175 ~~A~~~gIP~~~i~ 188 (281)
+.|+.+|||++.++
T Consensus 69 ~~a~~lgi~~~~i~ 82 (257)
T 2e18_A 69 LVAEKLGIGYKVIN 82 (257)
T ss_dssp HHHHHHTCEEEECC
T ss_pred HHHHHhCCCEEEEE
Confidence 88999999999987
No 131
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=63.78 E-value=22 Score=29.34 Aligned_cols=55 Identities=18% Similarity=0.125 Sum_probs=37.4
Q ss_pred eeEEEEeeCCh-h-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHHHHHhCCCCEEEeC
Q 023530 129 YKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 129 ~rIavl~Sg~G-s-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~~A~~~gIP~~~i~ 188 (281)
.||+|+.||+- | .+-.++.. .+ .++.++..|+...+. ..+.+.|+++|||+++++
T Consensus 4 ~~v~v~lSGG~DS~~ll~ll~~--~~---~~v~~~~~~~~~~~~~e~~~a~~~a~~lgi~~~~~~ 63 (219)
T 3bl5_A 4 EKAIVVFSGGQDSTTCLLWALK--EF---EEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLD 63 (219)
T ss_dssp CEEEEECCSSHHHHHHHHHHHH--HC---SEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCEEEEccCcHHHHHHHHHHHH--cC---CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 48999999983 4 44444443 34 477777777643221 256788999999999887
No 132
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=63.60 E-value=16 Score=34.98 Aligned_cols=62 Identities=11% Similarity=0.077 Sum_probs=43.9
Q ss_pred ccEEEEEEcC---CCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhh
Q 023530 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (281)
Q Consensus 41 ~~~iltV~G~---DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l 113 (281)
.-..++++|. .+||+.+++-+.|+++|+||.-++|.+. .. .+.+.++ .++..++++.+-++|
T Consensus 373 ~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgtS---ei-~Is~vV~-------~~d~~~Av~aLH~~f 437 (446)
T 3tvi_A 373 NMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSS---EI-NVIVGVE-------TVDFEKAVKSIYNAF 437 (446)
T ss_dssp EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECSC---TT-EEEEEEE-------GGGHHHHHHHHHHHH
T ss_pred CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecCC---Cc-eEEEEEc-------HHHHHHHHHHHHHHH
Confidence 4579999997 5899999999999999999999998532 22 2233333 244566666665554
No 133
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=63.40 E-value=22 Score=26.35 Aligned_cols=59 Identities=14% Similarity=0.085 Sum_probs=45.3
Q ss_pred HHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEe
Q 023530 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (281)
Q Consensus 101 ~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Vis 163 (281)
-+|.....+|.++|+..|..+..+ - +|-+.+.|....++++++.++.|.-.+.|.-|-.
T Consensus 18 GFR~~v~~~A~~lgL~G~V~N~~d--G--~Vei~~~G~~~~v~~f~~~l~~gP~~a~V~~v~~ 76 (91)
T 1w2i_A 18 GFRWSMQREARKLGVNGWVRNLPD--G--SVEAVLEGDEERVEALIGWAHQGPPLARVTRVEV 76 (91)
T ss_dssp SHHHHHHHHHHHHTCEEEEEECTT--S--CEEEEEEEEHHHHHHHHHHTTTCSTTCEEEEEEE
T ss_pred CHHHHHHHHHHHcCCeEEEEECCC--C--CEEEEEEeCHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 378888999999999998544322 2 6888899988889999999887654477766643
No 134
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=62.13 E-value=12 Score=35.88 Aligned_cols=64 Identities=16% Similarity=0.074 Sum_probs=44.4
Q ss_pred ccEEEEEEcC---CCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcc
Q 023530 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (281)
Q Consensus 41 ~~~iltV~G~---DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l 115 (281)
.-.+++++|. ++||+.+++.+.|+++|+||.-++|.+. .. .+.+.++ .++..++++.+-+.|.+
T Consensus 403 ~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~misqgtS---e~-~Is~vV~-------~~d~~~Av~aLh~~f~~ 469 (473)
T 3c1m_A 403 DVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIAQGSS---EV-NISFVID-------EKDLLNCVRKLHEKFIE 469 (473)
T ss_dssp EEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEEEESSC---SS-EEEEEEE-------GGGHHHHHHHHHHHHTT
T ss_pred CcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEEecCCC---Cc-eEEEEEc-------HHHHHHHHHHHHHHHhc
Confidence 4467999997 5899999999999999999987876432 22 2233333 24456666666666643
No 135
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=61.72 E-value=10 Score=33.95 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=20.0
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNH 165 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~ 165 (281)
++||+|.+.|. |..+...+.+ .+ ..++++|+...
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~--~~--~~elvav~d~~ 43 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALRE--AP--DFEIAGIVRRN 43 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--CT--TEEEEEEECC-
T ss_pred CCEEEEECChHHHHHHHHHHhc--CC--CCEEEEEEcCC
Confidence 67999999987 4433222222 12 37888876543
No 136
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=61.28 E-value=10 Score=33.75 Aligned_cols=47 Identities=11% Similarity=0.104 Sum_probs=28.6
Q ss_pred CeeEEEEeeCC-hh--HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCE
Q 023530 128 KYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (281)
Q Consensus 128 ~~rIavl~Sg~-Gs--nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~ 184 (281)
++||+|++.|. |. -+.+|.. .+ ..+++ ++++ ....+.+.|+++|++.
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~---~~--~~~l~--v~d~---~~~~~~~~a~~~g~~~ 51 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQ---WP--DIELV--LCTR---NPKVLGTLATRYRVSA 51 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTT---ST--TEEEE--EECS---CHHHHHHHHHHTTCCC
T ss_pred CcEEEEECCCHHHHHHHHHHHHh---CC--CceEE--EEeC---CHHHHHHHHHHcCCCc
Confidence 47999999987 33 2333322 12 35777 5554 2335667888999874
No 137
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=61.24 E-value=31 Score=30.91 Aligned_cols=55 Identities=4% Similarity=-0.092 Sum_probs=33.8
Q ss_pred CCCCeeEEEEeeCC-hh--HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 125 IDPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 125 ~~~~~rIavl~Sg~-Gs--nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
..+|+||+++..+. || -+.+|.++.++- ..+|..+ +. + ...+..++.|++++.++
T Consensus 17 ~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~--Gh~V~v~-~~-~-----~~~~~~~~~G~~~~~~~ 74 (415)
T 3rsc_A 17 GRHMAHLLIVNVASHGLILPTLTVVTELVRR--GHRVSYV-TA-G-----GFAEPVRAAGATVVPYQ 74 (415)
T ss_dssp --CCCEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEE-EC-G-----GGHHHHHHTTCEEEECC
T ss_pred cccCCEEEEEeCCCccccccHHHHHHHHHHC--CCEEEEE-eC-H-----HHHHHHHhcCCEEEecc
Confidence 45688999988776 42 233455554432 2577654 43 2 24567788999999887
No 138
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=60.84 E-value=17 Score=28.22 Aligned_cols=69 Identities=14% Similarity=0.208 Sum_probs=39.8
Q ss_pred CeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCCCE
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~Dl 207 (281)
.+||+|+++|.- -..++...... .++ + ++.|+ ....+.++|+++|+++...+ + +.+.++++|+
T Consensus 21 ~~~v~iiG~G~i--G~~~a~~l~~~--g~~-v-~v~~r---~~~~~~~~a~~~~~~~~~~~----~----~~~~~~~~Di 83 (144)
T 3oj0_A 21 GNKILLVGNGML--ASEIAPYFSYP--QYK-V-TVAGR---NIDHVRAFAEKYEYEYVLIN----D----IDSLIKNNDV 83 (144)
T ss_dssp CCEEEEECCSHH--HHHHGGGCCTT--TCE-E-EEEES---CHHHHHHHHHHHTCEEEECS----C----HHHHHHTCSE
T ss_pred CCEEEEECCCHH--HHHHHHHHHhC--CCE-E-EEEcC---CHHHHHHHHHHhCCceEeec----C----HHHHhcCCCE
Confidence 458999998752 12333333321 356 3 34454 23345677888887654432 1 3345568999
Q ss_pred EEEecc
Q 023530 208 LVLARY 213 (281)
Q Consensus 208 IVLAgY 213 (281)
||.|--
T Consensus 84 vi~at~ 89 (144)
T 3oj0_A 84 IITATS 89 (144)
T ss_dssp EEECSC
T ss_pred EEEeCC
Confidence 998743
No 139
>3lm8_A Thiamine pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: VIB; 2.60A {Bacillus subtilis}
Probab=60.49 E-value=7.7 Score=33.67 Aligned_cols=56 Identities=11% Similarity=0.051 Sum_probs=36.9
Q ss_pred eEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCC-ChHHHHHHHHh-CCCEEEEecc
Q 023530 157 EITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKEN-EREEELLELVQ-NTDFLVLARY 213 (281)
Q Consensus 157 eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~-~~e~~l~~~L~-~~DlIVLAgY 213 (281)
..-.++.| .|.-....+++.++.|+++..+| .|+. +.|.++..+++ +++-|++.|-
T Consensus 44 ~Pd~ivGD-fDSi~~~~~~~~~~~~~~i~~~p~eKD~TD~e~Al~~a~~~g~~~I~i~Ga 102 (222)
T 3lm8_A 44 IPVEAFGD-FDSITEQERRRIEKAAPALHVYQAEKDQTDLDLALDWALEKQPDIIQIFGI 102 (222)
T ss_dssp CCSEEESC-STTSCHHHHHHHHHHCTTCEEECCCSSSCHHHHHHHHHHHHCCSEEEEESC
T ss_pred CCcEEEeC-cccCCHHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHHcCCCEEEEEcC
Confidence 34467787 55445567888888999999987 5543 33556666666 6666665554
No 140
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=60.32 E-value=16 Score=34.34 Aligned_cols=51 Identities=14% Similarity=0.240 Sum_probs=31.2
Q ss_pred CCCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCC
Q 023530 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (281)
Q Consensus 126 ~~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP 183 (281)
.+++||+|++.|. |. ..++..+.... .+++++|.... ...+.+.|+++|+|
T Consensus 81 ~~~irigiIG~G~~g~--~~~~~~l~~~~-~~~lvav~d~~----~~~~~~~a~~~g~~ 132 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYAL--NQILPGFAGCQ-HSRIEALVSGN----AEKAKIVAAEYGVD 132 (433)
T ss_dssp CCCEEEEEECCSHHHH--HTHHHHTTTCS-SEEEEEEECSC----HHHHHHHHHHTTCC
T ss_pred CCceEEEEECCcHHHH--HHHHHHHhhCC-CcEEEEEEcCC----HHHHHHHHHHhCCC
Confidence 3468999999986 32 12333332211 36888776543 23466788999987
No 141
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=59.97 E-value=19 Score=33.57 Aligned_cols=57 Identities=19% Similarity=0.255 Sum_probs=39.5
Q ss_pred CCeeEEEEeeCCh-h-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCC-----------hhHHHHHHhCCCCEEEeC
Q 023530 127 PKYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPN-----------SHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 127 ~~~rIavl~Sg~G-s-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~-----------a~~~~~A~~~gIP~~~i~ 188 (281)
..+||+|..||+- | .+-.++.. .| .+|.+|..++.+..+ ..+.+.|+++|||+++++
T Consensus 8 ~~~kVlVa~SGGvDSsv~a~lL~~--~G---~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~ 77 (376)
T 2hma_A 8 SKTRVVVGMSGGVDSSVTALLLKE--QG---YDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVN 77 (376)
T ss_dssp GGSEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCeEEEEEeCHHHHHHHHHHHHH--cC---CcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEEe
Confidence 4569999999983 4 44444443 34 588888887643211 246788999999999987
No 142
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=59.93 E-value=27 Score=26.35 Aligned_cols=59 Identities=14% Similarity=0.046 Sum_probs=45.9
Q ss_pred HHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEe
Q 023530 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (281)
Q Consensus 101 ~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Vis 163 (281)
-+|.-...+|.++|+..|..+..+- +|-+.+.|....++++++.++.|.-.+.|.-|-.
T Consensus 26 GFR~~v~~~A~~lgL~G~VrN~~dG----~Vei~~eG~~~~l~~f~~~l~~gPp~A~V~~v~~ 84 (98)
T 3trg_A 26 FFRESVRKKAEELQLTGWVKNLSHG----DVELVACGERDSIMILTEWLWEGPPQAAVSNVNW 84 (98)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECTTS----CEEEEEEEEHHHHHHHHHHTTTCSTTCEEEEEEE
T ss_pred CccHHHHHHHHHcCCeEEEEECCCC----EEEEEEEECHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 3788888999999999986543322 6888999998999999999887654477766644
No 143
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=59.60 E-value=27 Score=26.45 Aligned_cols=60 Identities=18% Similarity=0.114 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEe
Q 023530 100 EQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (281)
Q Consensus 100 ~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Vis 163 (281)
--+|.....+|.++|+..|..+..+ - +|-+.+.|....++++++.++.|.-.+.|.-|-.
T Consensus 27 VGFR~~v~~~A~~lgL~G~V~N~~d--G--~Vei~~eG~~~~i~~f~~~l~~gP~~A~V~~v~~ 86 (101)
T 2bjd_A 27 VGFRKFVQIHAIRLGIKGYAKNLPD--G--SVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDY 86 (101)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECTT--S--CEEEEEEEEHHHHHHHHHHHTTCSTTCEEEEEEE
T ss_pred cCHHHHHHHHHHHcCCeEEEEECCC--C--cEEEEEEeCHHHHHHHHHHHHhCCCccEEEEEEE
Confidence 3478889999999999998644332 2 6888999988889999999887743377766633
No 144
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=59.52 E-value=34 Score=25.48 Aligned_cols=71 Identities=8% Similarity=0.042 Sum_probs=36.3
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH-HhCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNT 205 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~-L~~~ 205 (281)
.++|+|++.|. |..+-..+.. .| .+|.++ ..++ ......++++|+++...+.. + .+.+.+. ++++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~--~g---~~v~~~-d~~~----~~~~~~~~~~~~~~~~~d~~--~-~~~l~~~~~~~~ 70 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE--KG---HDIVLI-DIDK----DICKKASAEIDALVINGDCT--K-IKTLEDAGIEDA 70 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TT---CEEEEE-ESCH----HHHHHHHHHCSSEEEESCTT--S-HHHHHHTTTTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CC---CeEEEE-ECCH----HHHHHHHHhcCcEEEEcCCC--C-HHHHHHcCcccC
Confidence 36899998766 4443333322 24 466544 3322 22344455668776554311 1 2233322 3489
Q ss_pred CEEEEe
Q 023530 206 DFLVLA 211 (281)
Q Consensus 206 DlIVLA 211 (281)
|+|+++
T Consensus 71 d~vi~~ 76 (140)
T 1lss_A 71 DMYIAV 76 (140)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 999987
No 145
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=59.30 E-value=33 Score=25.89 Aligned_cols=59 Identities=7% Similarity=-0.111 Sum_probs=45.6
Q ss_pred HHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhh-cCCCCeeEEEEEe
Q 023530 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVIS 163 (281)
Q Consensus 101 ~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~-~g~l~~eI~~Vis 163 (281)
-+|.....+|.++|+..|..+..+- +|-+.+.|....++++++.++ .|.-.+.|.-|-.
T Consensus 25 GFR~~v~~~A~~lgL~G~V~N~~dG----~Vei~~eG~~~~l~~f~~~l~~~gP~~a~V~~v~~ 84 (102)
T 1urr_A 25 FFRKHTSHEAKRLGVRGWCMNTRDG----TVKGQLEAPMMNLMEMKHWLENNRIPNAKVSKAEF 84 (102)
T ss_dssp SHHHHHHHHHHHHTCEEEEEECTTS----CEEEEEEECHHHHHHHHHHHHHCCSTTCEEEEEEE
T ss_pred ChhHHHHHHHHHhCCcEEEEECCCC----CEEEEEEcCHHHHHHHHHHHHhcCCCccEEEEEEE
Confidence 3788889999999999986543322 688889999889999999987 4644578877644
No 146
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=59.26 E-value=18 Score=34.63 Aligned_cols=59 Identities=14% Similarity=0.146 Sum_probs=39.7
Q ss_pred CCCCeeEEEEeeCC-h-hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC-hhHHHHHHhCCC-CEEEeC
Q 023530 125 IDPKYKVAVLASKQ-E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPN-SHVIRFLERHGI-PYHYLC 188 (281)
Q Consensus 125 ~~~~~rIavl~Sg~-G-snL~aLl~~~~~g~l~~eI~~Visn~pd~~~-a~~~~~A~~~gI-P~~~i~ 188 (281)
...+.||+|..||+ + +.+-.++.. .| .+|.+|..|.....+ ..+.+.|++.|| |+++++
T Consensus 11 ~~~~~KVVVA~SGGlDSSv~a~~Lke--~G---~eViavt~d~Gq~~Ele~A~~vA~~lGi~~~~VvD 73 (421)
T 1vl2_A 11 HHMKEKVVLAYSGGLDTSVILKWLCE--KG---FDVIAYVANVGQKDDFVAIKEKALKTGASKVYVED 73 (421)
T ss_dssp ---CCEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEE
T ss_pred ccccCCEEEEeCCcHHHHHHHHHHHH--CC---CeEEEEEEEcCCHHHHHHHHHHHHHcCCceEEEEe
Confidence 34567999999998 3 444444442 35 588888877632112 367889999999 899887
No 147
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=58.56 E-value=24 Score=30.84 Aligned_cols=64 Identities=13% Similarity=0.095 Sum_probs=35.3
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCC
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~ 205 (281)
+|+||+|++.|. |+.+-..+.. .| .+|. +.|+ +....+.+.+.|+... . + ..+.++++
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~--~G---~~V~--~~d~----~~~~~~~~~~~g~~~~--~----~----~~~~~~~a 60 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLK--AG---YLLN--VFDL----VQSAVDGLVAAGASAA--R----S----ARDAVQGA 60 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHH--TT---CEEE--EECS----SHHHHHHHHHTTCEEC--S----S----HHHHHTTC
T ss_pred CCCEEEEEeecHHHHHHHHHHHh--CC---CeEE--EEcC----CHHHHHHHHHCCCeEc--C----C----HHHHHhCC
Confidence 468999999998 6555443332 34 3554 3454 2223444455565321 1 1 22445578
Q ss_pred CEEEEe
Q 023530 206 DFLVLA 211 (281)
Q Consensus 206 DlIVLA 211 (281)
|+|+++
T Consensus 61 Dvvi~~ 66 (302)
T 2h78_A 61 DVVISM 66 (302)
T ss_dssp SEEEEC
T ss_pred CeEEEE
Confidence 888887
No 148
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=58.46 E-value=34 Score=29.97 Aligned_cols=79 Identities=11% Similarity=0.082 Sum_probs=48.3
Q ss_pred CCeeEEEEee-----CCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCC-C-CC--hH
Q 023530 127 PKYKVAVLAS-----KQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-E-NE--RE 195 (281)
Q Consensus 127 ~~~rIavl~S-----g~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k-~-~~--~e 195 (281)
+++||+++.. .+| ..+..|++.. +| .+|..+..+. .......+....+++++.++.. . .. .-
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L-~g---~~v~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ-DP---ESIVVFASTQ---NAEEAHAYDKTLDYEVIRWPRSVMLPTPTTA 75 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS-CG---GGEEEEEECS---SHHHHHHHHTTCSSEEEEESSSSCCSCHHHH
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh-cC---CeEEEEECCC---CccchhhhccccceEEEEccccccccchhhH
Confidence 4789999886 223 5566677766 33 5777666654 2222245566788888888732 1 11 12
Q ss_pred HHHHHHHh--CCCEEEEec
Q 023530 196 EELLELVQ--NTDFLVLAR 212 (281)
Q Consensus 196 ~~l~~~L~--~~DlIVLAg 212 (281)
..+.+.++ ++|+|.+-+
T Consensus 76 ~~l~~~~~~~~~Dvv~~~~ 94 (394)
T 3okp_A 76 HAMAEIIREREIDNVWFGA 94 (394)
T ss_dssp HHHHHHHHHTTCSEEEESS
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 45667777 899998643
No 149
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=58.27 E-value=22 Score=32.19 Aligned_cols=65 Identities=22% Similarity=0.258 Sum_probs=36.9
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~D 206 (281)
.+||+|++.|. |+.+-..+.. .| .+|. +.++ ......+.|++.|+.+. + +.+.++++|
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~--~G---~~V~--~~~~---~~~~~~~~a~~~G~~~~--~---------~~e~~~~aD 74 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKD--SG---VDVT--VGLR---SGSATVAKAEAHGLKVA--D---------VKTAVAAAD 74 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH--TT---CCEE--EECC---TTCHHHHHHHHTTCEEE--C---------HHHHHHTCS
T ss_pred CCEEEEECchHHHHHHHHHHHH--Cc---CEEE--EEEC---ChHHHHHHHHHCCCEEc--c---------HHHHHhcCC
Confidence 35899999988 5544433332 34 3543 4554 22234678888887432 2 113445778
Q ss_pred EEEEecc
Q 023530 207 FLVLARY 213 (281)
Q Consensus 207 lIVLAgY 213 (281)
+|++|=-
T Consensus 75 vVilavp 81 (338)
T 1np3_A 75 VVMILTP 81 (338)
T ss_dssp EEEECSC
T ss_pred EEEEeCC
Confidence 8877743
No 150
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=57.89 E-value=40 Score=30.05 Aligned_cols=56 Identities=13% Similarity=0.039 Sum_probs=34.5
Q ss_pred CCCCeeEEEEeeCCh-h--HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCC
Q 023530 125 IDPKYKVAVLASKQE-H--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189 (281)
Q Consensus 125 ~~~~~rIavl~Sg~G-s--nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~ 189 (281)
...+|||++.+.+.+ + -+.+|.+..++- ..+|..+.+. ...+..++.|++++.++.
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~--GheV~v~~~~-------~~~~~~~~~g~~~~~~~~ 75 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAA--GHEVTFATGE-------GFAGTLRKLGFEPVATGM 75 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEECG-------GGHHHHHHTTCEEEECCC
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHC--CCEEEEEccH-------HHHHHHHhcCCceeecCc
Confidence 355789998887764 2 223455555432 2577654332 135677889999998763
No 151
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=57.87 E-value=32 Score=30.65 Aligned_cols=82 Identities=15% Similarity=0.287 Sum_probs=51.3
Q ss_pred eeEEEEeeCC-----hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 129 YKVAVLASKQ-----EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 129 ~rIavl~Sg~-----GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
|||+|-+-++ ||-++-|.-+ ..+. +|..+..+. +. .+.++.|.|++.++.. +.+++.+.++
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA---~~l~-~v~F~~~~~---~~----~~~~~~g~~v~~l~~~---d~~~~~~~l~ 66 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLA---KQYS-DVSFACLPL---EG----SLIDEIPYPVYELSSE---SIYELINLIK 66 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHH---TTCS-SEEEEECCC---TT----CCGGGCCSCEEECSSS---CHHHHHHHHH
T ss_pred CEEEEEEecCCCccccHHHHHHHHH---HHHH-hCEEEEecC---cH----hHHHHCCCeEEEcCcc---CHHHHHHHHH
Confidence 3566655443 6777766443 3344 666654432 21 2344559998887632 2346778887
Q ss_pred --CCCEEEEecccccCChhHHhhhc
Q 023530 204 --NTDFLVLARYMQPVPLQKEAYLG 226 (281)
Q Consensus 204 --~~DlIVLAgYMrILs~~fl~~~~ 226 (281)
++|++|+=.|- +++++.+..+
T Consensus 67 ~~~~d~lIvD~Y~--~~~~~~~~lk 89 (282)
T 3hbm_A 67 EEKFELLIIDHYG--ISVDDEKLIK 89 (282)
T ss_dssp HHTCSEEEEECTT--CCHHHHHHHH
T ss_pred hCCCCEEEEECCC--CCHHHHHHHH
Confidence 89999999996 6887765543
No 152
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=57.26 E-value=32 Score=33.45 Aligned_cols=84 Identities=14% Similarity=0.234 Sum_probs=50.4
Q ss_pred cEEEEEEc---CCCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCC-CHHHHHHHHHHHhhhhcccc
Q 023530 42 HGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKW-PREQMDEDFFKLSKMFNAMR 117 (281)
Q Consensus 42 ~~iltV~G---~DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~-~~~~L~~~L~~la~~l~l~~ 117 (281)
-..|++.| ++++|+.++|-+.|+++|+||.-+.|.. .. +.+.++..+. ..+.+++.|+++.++++..
T Consensus 341 ~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~sse------~s--is~~v~~~~~~~~~~~~~~l~~~~~el~~~- 411 (510)
T 2cdq_A 341 VTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVATSE------VS--ISLTLDPSKLWSRELIQQELDHVVEELEKI- 411 (510)
T ss_dssp EEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEEET------TE--EEEEECCGGGSSSCCCHHHHHHHHHHHTTT-
T ss_pred eEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEEeCC------Ce--EEEEEechHhhhhhHHHHHHHHHHHHhCCC-
Confidence 35788887 6899999999999999999999997731 12 2333333111 1111234555555555531
Q ss_pred eeeeecCCCCCeeEEEEee
Q 023530 118 SVVRVPDIDPKYKVAVLAS 136 (281)
Q Consensus 118 ~~~~~~~~~~~~rIavl~S 136 (281)
..+.+ ....-+|++.++
T Consensus 412 ~~v~~--~~~~a~VsiVG~ 428 (510)
T 2cdq_A 412 AVVNL--LKGRAIISLIGN 428 (510)
T ss_dssp SEEEE--EEEEEEEEEEEC
T ss_pred CeEEE--eCCcEEEEEEEE
Confidence 11222 233457888777
No 153
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=56.92 E-value=7.4 Score=33.61 Aligned_cols=68 Identities=13% Similarity=0.108 Sum_probs=37.1
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCC
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~ 205 (281)
+..||+|.+.|+ |..+.. .........++++++.+.|++. -..-.|+|+...+ ++.+.+++.
T Consensus 84 ~~~rV~IIGAG~~G~~La~---~~~~~~~g~~iVg~~D~dp~k~------g~~i~gv~V~~~~--------dl~eli~~~ 146 (215)
T 2vt3_A 84 EMTDVILIGVGNLGTAFLH---YNFTKNNNTKISMAFDINESKI------GTEVGGVPVYNLD--------DLEQHVKDE 146 (215)
T ss_dssp ---CEEEECCSHHHHHHHH---CC------CCEEEEEESCTTTT------TCEETTEEEEEGG--------GHHHHCSSC
T ss_pred CCCEEEEEccCHHHHHHHH---HHhcccCCcEEEEEEeCCHHHH------HhHhcCCeeechh--------hHHHHHHhC
Confidence 356899999987 544433 2111222478999999875321 1123577776532 255666622
Q ss_pred CEEEEe
Q 023530 206 DFLVLA 211 (281)
Q Consensus 206 DlIVLA 211 (281)
|.+++|
T Consensus 147 D~ViIA 152 (215)
T 2vt3_A 147 SVAILT 152 (215)
T ss_dssp CEEEEC
T ss_pred CEEEEe
Confidence 888887
No 154
>1uv7_A General secretion pathway protein M; transport; HET: MSE; 1.7A {Vibrio cholerae} SCOP: d.67.4.1
Probab=56.21 E-value=57 Score=25.10 Aligned_cols=65 Identities=5% Similarity=-0.021 Sum_probs=50.2
Q ss_pred CCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcccceeeeecCC
Q 023530 51 DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVPDI 125 (281)
Q Consensus 51 DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~~~~~~~~~ 125 (281)
+...+-..|++...++|+.|..++. .|. .+++.+ + .+++.+|-..|+++-.+.|+....+.+...
T Consensus 21 ~~~~L~~~v~~Sa~~~gL~i~R~qp-----~g~-~vqV~l--~--~v~F~~L~~WL~~L~~~~Gv~v~~l~l~~~ 85 (110)
T 1uv7_A 21 SDQPLNQVITNSTRQFNIELIRVQP-----RGE-MMQVWI--Q--PLPFSQLVSWIAYLQERQGVSVDAIDIDRG 85 (110)
T ss_dssp --CCHHHHHHHHHHHHTCCEEEEEE-----CSS-EEEEEE--C--CBCHHHHHHHHHHHHHHSCCEEEEEEEEEC
T ss_pred CCccHHHHHHHHHHHCCCeEEEecC-----CCC-EEEEEE--C--CCCHHHHHHHHHHHHHhcCceEEEEEEeec
Confidence 4567889999999999999988776 355 444444 3 568999999999999999988777776654
No 155
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=56.09 E-value=43 Score=30.34 Aligned_cols=36 Identities=8% Similarity=0.110 Sum_probs=21.3
Q ss_pred CCCeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCC
Q 023530 126 DPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNH 165 (281)
Q Consensus 126 ~~~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~ 165 (281)
.+++||+|++.|. |.. ....+... + .+++++|....
T Consensus 5 ~~~~rvgiiG~G~~g~~~~~~~l~~~--~--~~~l~av~d~~ 42 (364)
T 3e82_A 5 NNTINIALIGYGFVGKTFHAPLIRSV--P--GLNLAFVASRD 42 (364)
T ss_dssp --CEEEEEECCSHHHHHTHHHHHHTS--T--TEEEEEEECSC
T ss_pred CCcceEEEECCCHHHHHHHHHHHhhC--C--CeEEEEEEcCC
Confidence 4678999999987 332 23333321 2 37888877643
No 156
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=55.44 E-value=31 Score=27.18 Aligned_cols=75 Identities=11% Similarity=0.168 Sum_probs=44.4
Q ss_pred CeeEEEEeeCCh---hHHHHHHHhhhcCCCCeeEEEEEeC-CCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISN-HDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 128 ~~rIavl~Sg~G---snL~aLl~~~~~g~l~~eI~~Visn-~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
++||.|..+|+. .-.++|+.+...+ ..+|.---+. ++ ++..+.+.++++||+.-....+.-. + ..++
T Consensus 3 ~~~VLFVC~gN~cRSpmAEai~~~~~~~--~~~v~SAGt~~~~--~~p~a~~~l~~~Gid~s~~~sr~l~-~----~~~~ 73 (139)
T 1jl3_A 3 NKIIYFLCTGNSCRSQMAEGWAKQYLGD--EWKVYSAGIEAHG--LNPNAVKAMKEVGIDISNQTSDIID-S----DILN 73 (139)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSCT--TEEEEEEESSCCC--CCHHHHHHHHHTTCCCTTCCCCBCC-H----HHHT
T ss_pred CCeEEEEcCCchHHHHHHHHHHHHhCCC--CEEEEcCcCCCCC--CCHHHHHHHHHcCCCcccCccCcCC-H----HHhh
Confidence 358999999995 4556666665433 2344222222 32 5667899999999986322111111 1 1234
Q ss_pred CCCEEEEe
Q 023530 204 NTDFLVLA 211 (281)
Q Consensus 204 ~~DlIVLA 211 (281)
+.|+|+..
T Consensus 74 ~~D~Ii~m 81 (139)
T 1jl3_A 74 NADLVVTL 81 (139)
T ss_dssp TCSEEEEC
T ss_pred cCCEEEEe
Confidence 79999985
No 157
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=55.15 E-value=44 Score=29.09 Aligned_cols=57 Identities=12% Similarity=0.011 Sum_probs=37.8
Q ss_pred CeeEEEEeeCCh-h-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHHHHHhCCCCEEEeC
Q 023530 128 KYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 128 ~~rIavl~Sg~G-s-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~~A~~~gIP~~~i~ 188 (281)
..++++..||+- | .+-.++... + +.++.+|..++..... ..+.+.|+..|||++.++
T Consensus 25 ~~~vvv~lSGGiDSsv~~~l~~~~--~--~~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~~i~ 86 (268)
T 1xng_A 25 FKKVVYGLSGGLDSAVVGVLCQKV--F--KENAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYS 86 (268)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHH--H--GGGEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCEEEEccCcHHHHHHHHHHHHh--C--CCCEEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 347999999983 4 344444432 1 2468888887632111 247788999999999987
No 158
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=54.99 E-value=58 Score=29.08 Aligned_cols=53 Identities=9% Similarity=0.191 Sum_probs=33.1
Q ss_pred CCCeeEEEEeeCC-h--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 126 DPKYKVAVLASKQ-E--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 126 ~~~~rIavl~Sg~-G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
.++|||+++..+. | .-+.+|.++.++- ..+|..+.+ . ..+..+..|++++.++
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~--GheV~v~~~-~-------~~~~~~~~G~~~~~~~ 73 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTA--GHDVLIAVA-E-------HADRAAAAGLEVVDVA 73 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEES-S-------CHHHHHTTTCEEEESS
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHC--CCEEEEecc-c-------hHHHHHhCCCeeEecC
Confidence 4568999987554 4 2234566655442 257765444 2 2567788999999877
No 159
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=54.97 E-value=20 Score=31.80 Aligned_cols=66 Identities=17% Similarity=0.162 Sum_probs=36.4
Q ss_pred CCCCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 125 IDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 125 ~~~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
...++||+|++.|. |..+-..+.. .| .+|. +.|+ .... .+.+.+.|+.+ .. + ..+.++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~--~G---~~V~--~~dr---~~~~-~~~l~~~g~~~--~~----~----~~~~~~ 76 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLK--NG---FKVT--VWNR---TLSK-CDELVEHGASV--CE----S----PAEVIK 76 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECS---SGGG-GHHHHHTTCEE--CS----S----HHHHHH
T ss_pred cccCCEEEEECccHHHHHHHHHHHH--CC---CeEE--EEeC---CHHH-HHHHHHCCCeE--cC----C----HHHHHH
Confidence 34578999999998 6555443332 35 3554 3464 1222 33444666532 11 1 224455
Q ss_pred CCCEEEEe
Q 023530 204 NTDFLVLA 211 (281)
Q Consensus 204 ~~DlIVLA 211 (281)
++|+|+++
T Consensus 77 ~aDvvi~~ 84 (310)
T 3doj_A 77 KCKYTIAM 84 (310)
T ss_dssp HCSEEEEC
T ss_pred hCCEEEEE
Confidence 78999887
No 160
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=54.94 E-value=15 Score=30.82 Aligned_cols=55 Identities=4% Similarity=-0.026 Sum_probs=37.9
Q ss_pred eeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHHHHHhCCCCEEEeC
Q 023530 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 129 ~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~~A~~~gIP~~~i~ 188 (281)
.||+|-.||+- +.|-.|+... + .++.+|..|+.-..+ ..+.+.|+++|||++++.
T Consensus 45 ~~v~Va~SGGkDS~vLL~ll~~~--~---~~v~~v~vd~g~~~~e~~~~v~~~~~~~gi~~~v~~ 104 (215)
T 1sur_A 45 GEYVLSSSFGIQAAVSLHLVNQI--R---PDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYR 104 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHHHH--S---TTCEEEEEECSCBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEecCCHHHHHHHHHHHHh--C---CCCeEEEeeCCCCCHHHHHHHHHHHHHhCCcEEEEe
Confidence 37999999973 5666666543 2 256677777632211 357888999999999886
No 161
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=54.83 E-value=24 Score=29.25 Aligned_cols=50 Identities=8% Similarity=0.043 Sum_probs=27.9
Q ss_pred eeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 129 ~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
|||+|++.|. |..+-..+.. .| .++.++-.| + ..+.+++++.|++++.-+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~--~g---~~v~vid~~-~----~~~~~l~~~~~~~~i~gd 51 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLS--RK---YGVVIINKD-R----ELCEEFAKKLKATIIHGD 51 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHH--TT---CCEEEEESC-H----HHHHHHHHHSSSEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CC---CeEEEEECC-H----HHHHHHHHHcCCeEEEcC
Confidence 4788888766 4444433332 24 466644333 2 234455667788877654
No 162
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=54.73 E-value=20 Score=33.49 Aligned_cols=58 Identities=16% Similarity=0.161 Sum_probs=38.8
Q ss_pred CCCeeEEEEeeCC-hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCC-----------hhHHHHHHhCCCCEEEeC
Q 023530 126 DPKYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPN-----------SHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 126 ~~~~rIavl~Sg~-Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~-----------a~~~~~A~~~gIP~~~i~ 188 (281)
....||+|..||+ +| .+..|+.. .| .+|.+|..++-+..+ ..+...|+++|||+++++
T Consensus 15 ~~~~kVvVa~SGGvDSsv~a~lL~~--~G---~~V~~v~~~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vvd 85 (380)
T 2der_A 15 ETAKKVIVGMSGGVDSSVSAWLLQQ--QG---YQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVN 85 (380)
T ss_dssp --CCEEEEECCSCSTTHHHHHHHHT--TC---CEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCEEEEEEEChHHHHHHHHHHHH--cC---CeEEEEEEEcCccccccCCCCCHHHHHHHHHHHHHcCCcEEEEe
Confidence 3456999999998 34 44444443 34 688888887532111 246788999999999987
No 163
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=54.66 E-value=1e+02 Score=26.31 Aligned_cols=107 Identities=10% Similarity=-0.016 Sum_probs=58.5
Q ss_pred HHHhhhhcccceeeeecC--CCCCeeEEEEeeCChhHHHHHHHhhhc-CCCCeeEEEEEeCCCCCCC----hhHHHHHHh
Q 023530 107 FKLSKMFNAMRSVVRVPD--IDPKYKVAVLASKQEHCLVDFLYGWQE-GKLPVEITCVISNHDRGPN----SHVIRFLER 179 (281)
Q Consensus 107 ~~la~~l~l~~~~~~~~~--~~~~~rIavl~Sg~GsnL~aLl~~~~~-g~l~~eI~~Visn~pd~~~----a~~~~~A~~ 179 (281)
+.+..........++-.. .....||.|-..++..+..++-.+..- ....+++.++-...++ .. ....+..++
T Consensus 147 ~~vl~~~~~PVlvv~~~~~~~~~~~~Ilv~~d~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~-~~~~~l~~~~~~l~~ 225 (294)
T 3loq_A 147 EGVLHDSKVPVYIFKHDMVVNSLFDRVLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDG-DKTADLRVMEEVIGA 225 (294)
T ss_dssp HHHHHHCSSCEEEECCCTTTTCTTSEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEECSSS-CCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCEEEecCccccCccCCEEEEEECCCHHHHHHHHHHHHHhhhcCCEEEEEEEccCc-hHHHHHHHHHHHHHH
Confidence 344444444443333222 134578988888876554444222111 0113456555444221 11 134566778
Q ss_pred CCCCEEEeCCCCCChHHHHHHHHh--CCCEEEEecccc
Q 023530 180 HGIPYHYLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (281)
Q Consensus 180 ~gIP~~~i~~k~~~~e~~l~~~L~--~~DlIVLAgYMr 215 (281)
+|+++...-.. .+..++|.+..+ ++|+||+..+.+
T Consensus 226 ~~~~~~~~~~~-g~~~~~I~~~a~~~~~dLlV~G~~~~ 262 (294)
T 3loq_A 226 EGIEVHVHIES-GTPHKAILAKREEINATTIFMGSRGA 262 (294)
T ss_dssp TTCCEEEEEEC-SCHHHHHHHHHHHTTCSEEEEECCCC
T ss_pred cCCcEEEEEec-CCHHHHHHHHHHhcCcCEEEEeCCCC
Confidence 89996553322 244567888777 899999998876
No 164
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=54.35 E-value=25 Score=29.56 Aligned_cols=81 Identities=12% Similarity=0.160 Sum_probs=45.6
Q ss_pred CCCeeEEEEeeCCh---hHHHHHHHhhhc--CCCCeeEEEEEeC--CCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHH
Q 023530 126 DPKYKVAVLASKQE---HCLVDFLYGWQE--GKLPVEITCVISN--HDRGPNSHVIRFLERHGIPYHYLCAKENEREEEL 198 (281)
Q Consensus 126 ~~~~rIavl~Sg~G---snL~aLl~~~~~--g~l~~eI~~Visn--~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l 198 (281)
.+++||.|..+|+- .-.++|+..... | +..+|.---+. +...++..+.+.++++||+.- ...+.-..
T Consensus 32 ~~~~~VLFVC~gNiCRSpmAEai~r~~~~~~g-~~~~v~SAGt~~~~G~~~dp~a~~vl~e~Gidis-hrar~lt~---- 105 (184)
T 4etn_A 32 RGSMDIIFVCTGNTSRSPMAEALFKSIAEREG-LNVNVRSAGVFASPNGKATPHAVEALFEKHIALN-HVSSPLTE---- 105 (184)
T ss_dssp --CEEEEEEESSSSSHHHHHHHHHHHHHHHHT-CCEEEEEEETTCCTTCBCCHHHHHHHHHTTCCCC-CBCCBCCH----
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHHHHHhcC-CcEEEEeeecCCcCCCCCCHHHHHHHHHcCCCch-hccCcCCH----
Confidence 45689999999995 444556554322 2 23454332221 111145678889999999976 33222111
Q ss_pred HHHHhCCCEEEEecc
Q 023530 199 LELVQNTDFLVLARY 213 (281)
Q Consensus 199 ~~~L~~~DlIVLAgY 213 (281)
+.+++.|+|+...-
T Consensus 106 -~d~~~~DlIltMd~ 119 (184)
T 4etn_A 106 -ELMESADLVLAMTH 119 (184)
T ss_dssp -HHHHHCSEEEESSH
T ss_pred -HHcCCCCEEEEcCc
Confidence 12336899998653
No 165
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=54.06 E-value=29 Score=32.83 Aligned_cols=56 Identities=14% Similarity=0.166 Sum_probs=38.9
Q ss_pred CeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC-hhHHHHHHhCCCC-EEEeC
Q 023530 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN-SHVIRFLERHGIP-YHYLC 188 (281)
Q Consensus 128 ~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~-a~~~~~A~~~gIP-~~~i~ 188 (281)
+.||++..||+- +.+-.++.. .| .+|.++..|+....+ ..+.+.|+++||| +++++
T Consensus 5 ~~kVvvalSGGlDSsvll~lL~e--~G---~eV~av~vd~g~~~e~e~a~~~A~~lGi~~~~vvd 64 (413)
T 2nz2_A 5 KGSVVLAYSGGLDTSCILVWLKE--QG---YDVIAYLANIGQKEDFEEARKKALKLGAKKVFIED 64 (413)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHH--TT---EEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEE
T ss_pred CCeEEEEEcChHHHHHHHHHHHH--cC---CEEEEEEEECCcHHHHHHHHHHHHHhCCCEEEEEe
Confidence 468999999973 444444443 23 688888888743222 4678899999999 76664
No 166
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=53.99 E-value=40 Score=25.22 Aligned_cols=58 Identities=9% Similarity=-0.131 Sum_probs=43.8
Q ss_pred HHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhh-cCCCCeeEEEEE
Q 023530 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVI 162 (281)
Q Consensus 101 ~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~-~g~l~~eI~~Vi 162 (281)
-+|.....+|.++|+..|..+..+- +|-+.+.|....++++++.++ .|.-.+.|.-|-
T Consensus 22 GFR~~v~~~A~~lgL~G~V~N~~dG----~Vei~~eG~~~~v~~f~~~l~~~~p~~a~V~~v~ 80 (99)
T 2vh7_A 22 FFRKHTQAEGKKLGLVGWVQNTDRG----TVQGQLQGPISKVRHMQEWLETRGSPKSHIDKAN 80 (99)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECTTS----CEEEEEEEEHHHHHHHHHHHHHTCSTTCEEEEEE
T ss_pred ChHHHHHHHHHHcCCcEEEEECCCC----CEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEE
Confidence 3788889999999999986543322 688889998888999999886 454346776653
No 167
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=53.98 E-value=61 Score=29.25 Aligned_cols=50 Identities=16% Similarity=0.108 Sum_probs=31.1
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEE
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 185 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~ 185 (281)
|.||||.+.|. |..+-.++.. .+ ..++++|....+ ..+...++.+|++++
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~--~~--~~elvav~d~~~----~~~~~~~~~~g~~~~ 52 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTK--QD--DMELIGITKTKP----DFEAYRAKELGIPVY 52 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT--CT--TEEEEEEEESSC----SHHHHHHHHTTCCEE
T ss_pred CcEEEEEeEhHHHHHHHHHHhc--CC--CCEEEEEEcCCH----HHHHHHHHhcCcccc
Confidence 46999999977 4443333332 12 368888776432 245567788887755
No 168
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=53.81 E-value=36 Score=27.00 Aligned_cols=82 Identities=11% Similarity=0.096 Sum_probs=49.8
Q ss_pred CCeeEEEEeeCCh---hHHHHHHHhhhcCCCCeeEEEEEeCC-CCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHH
Q 023530 127 PKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (281)
Q Consensus 127 ~~~rIavl~Sg~G---snL~aLl~~~~~g~l~~eI~~Visn~-pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L 202 (281)
+++||.|..+|+- .-.++|+.+...+.+.+.=+++-..| ...++..+.+.++++||+.-....+.-.. +.+
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s~~~sr~l~~-----~~~ 77 (146)
T 1p8a_A 3 EKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDISKQRARQITK-----ADF 77 (146)
T ss_dssp CCCCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCCCCCCCCCCS-----HHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCcccCCCCCHHHHHHHHHcCCChhcCeeccCCH-----hHh
Confidence 4678999999994 55677777765554444444444311 11155678889999999874322221111 122
Q ss_pred hCCCEEEEecc
Q 023530 203 QNTDFLVLARY 213 (281)
Q Consensus 203 ~~~DlIVLAgY 213 (281)
++.|+|+...-
T Consensus 78 ~~~DlIi~m~~ 88 (146)
T 1p8a_A 78 SKFDVIAALDQ 88 (146)
T ss_dssp HSCSEEEESSH
T ss_pred hcCCEEEEeCh
Confidence 38999998654
No 169
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=53.65 E-value=34 Score=27.74 Aligned_cols=82 Identities=17% Similarity=0.130 Sum_probs=47.3
Q ss_pred CCCeeEEEEeeCCh---hHHHHHHHhhhc--CC-CCeeEE--EEEeCC-CCCCChhHHHHHHhCCCCEEEeCCCCCChHH
Q 023530 126 DPKYKVAVLASKQE---HCLVDFLYGWQE--GK-LPVEIT--CVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREE 196 (281)
Q Consensus 126 ~~~~rIavl~Sg~G---snL~aLl~~~~~--g~-l~~eI~--~Visn~-pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~ 196 (281)
.+++||.|..+|+- .-.++|+.+... |- -..+|. ++-..+ ...++..+.+.++++||+.- ...+.-..
T Consensus 2 ~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s-~~ar~l~~-- 78 (161)
T 2cwd_A 2 DRPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFP-HVARRLTR-- 78 (161)
T ss_dssp CCCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCC-CCCCBCCH--
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCcc-ccccCCCH--
Confidence 35789999999995 445556655432 21 023443 333211 11256678899999999976 33222111
Q ss_pred HHHHHHhCCCEEEEecc
Q 023530 197 ELLELVQNTDFLVLARY 213 (281)
Q Consensus 197 ~l~~~L~~~DlIVLAgY 213 (281)
+.+++.|+|+...-
T Consensus 79 ---~~~~~~DlIi~M~~ 92 (161)
T 2cwd_A 79 ---EDVLAYDHILVMDR 92 (161)
T ss_dssp ---HHHHHCSEEEESSH
T ss_pred ---hHhccCCEEEECCh
Confidence 22237899998654
No 170
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=53.57 E-value=36 Score=30.39 Aligned_cols=68 Identities=9% Similarity=0.002 Sum_probs=36.2
Q ss_pred CCeeEEEEeeC-C-hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHH---
Q 023530 127 PKYKVAVLASK-Q-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLE--- 200 (281)
Q Consensus 127 ~~~rIavl~Sg-~-Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~--- 200 (281)
+|+||+|++.| . |. -+.+|.. . +.++++|.+-.+. . ...++.++.+-.+ . +.+ ++++
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~----~--~~~lvav~d~~~~---~--~~~~~~~~~~~~~-~----~~~-~ll~~~~ 64 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKD----T--GNCLVSAYDINDS---V--GIIDSISPQSEFF-T----EFE-FFLDHAS 64 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHH----T--TCEEEEEECSSCC---C--GGGGGTCTTCEEE-S----SHH-HHHHHHH
T ss_pred CceEEEEECCCcHHHHHHHHHHHh----C--CCEEEEEEcCCHH---H--HHHHhhCCCCcEE-C----CHH-HHHHhhh
Confidence 57899999994 3 42 2333322 2 3689888765432 1 1345555433333 1 233 3432
Q ss_pred HH----h-CCCEEEEe
Q 023530 201 LV----Q-NTDFLVLA 211 (281)
Q Consensus 201 ~L----~-~~DlIVLA 211 (281)
.| + ++|+|++|
T Consensus 65 ~l~~~~~~~vD~V~I~ 80 (318)
T 3oa2_A 65 NLKRDSATALDYVSIC 80 (318)
T ss_dssp HHTTSTTTSCCEEEEC
T ss_pred hhhhccCCCCcEEEEC
Confidence 22 3 78999886
No 171
>2h9z_A Hypothetical protein HP0495; feredoxin-like (beta-alpha-beta-BETA-alpha-beta), structural genomics, unknown function; NMR {Helicobacter pylori} SCOP: d.58.54.2 PDB: 2joq_A
Probab=53.54 E-value=22 Score=26.19 Aligned_cols=67 Identities=15% Similarity=0.005 Sum_probs=44.8
Q ss_pred CCCcccEEEEEEcCCCcc-hHHHHHHHHHhCCCeEeEeeeeccCCCCeEE-EEEEEEeCCCCCCHHHHHHHHHHHhh
Q 023530 37 SPTLTHGIHVFHCPDEVG-IVAKLSECIASRGGNILAADVFVPEKKNVFY-SRSEFIFDPIKWPREQMDEDFFKLSK 111 (281)
Q Consensus 37 ~~~~~~~iltV~G~DrpG-IVa~VS~~La~~giNI~dl~q~~~~~~g~F~-mrlev~~p~~~~~~~~L~~~L~~la~ 111 (281)
-..+-.|.+.|+|+..++ +..+|...+ +++..+ +. ...+..|.|. ..+.+.+. +.+++.+-++++++
T Consensus 10 iefPc~~~~Kvig~~~~~~~~~~V~~v~-~~~~~~-~~--~r~Ss~GkY~Svtv~i~a~----s~eq~~~iY~~L~~ 78 (86)
T 2h9z_A 10 IIYPCLWDYRVIMTTKDTSTLKELLETY-QRPFKL-EF--KNTSKNAKFYSFNVSMEVS----NESERNEIFQKISQ 78 (86)
T ss_dssp CCCCSEEEEEEEECCSCTHHHHHHSTTC-CSSEEC-CB--SCSSCCSSCEEEEEEEECC----SHHHHHHHHHHHTC
T ss_pred ccCCCCceEEEEEECCcHHHHHHHHHHH-hccCCC-cc--cccCCCCeEEEEEEEEEEC----CHHHHHHHHHHHhc
Confidence 344567999999999999 999999999 555543 21 1123478875 34455543 56777777766654
No 172
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=53.40 E-value=27 Score=27.95 Aligned_cols=70 Identities=13% Similarity=0.034 Sum_probs=39.0
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhc-CCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH--Hh
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL--VQ 203 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~-g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~--L~ 203 (281)
..+|+|++.|. |..+-..+.. . | .+|.++-.| + .-.+.+++.|+.+...+.. .++.+.++ ++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~--~~g---~~V~vid~~-~-----~~~~~~~~~g~~~~~gd~~---~~~~l~~~~~~~ 104 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA--RYG---KISLGIEIR-E-----EAAQQHRSEGRNVISGDAT---DPDFWERILDTG 104 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH--HHC---SCEEEEESC-H-----HHHHHHHHTTCCEEECCTT---CHHHHHTBCSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--ccC---CeEEEEECC-H-----HHHHHHHHCCCCEEEcCCC---CHHHHHhccCCC
Confidence 45899998877 5554444432 3 4 356544332 2 2345566789887765411 12223333 34
Q ss_pred CCCEEEEe
Q 023530 204 NTDFLVLA 211 (281)
Q Consensus 204 ~~DlIVLA 211 (281)
++|+||++
T Consensus 105 ~ad~vi~~ 112 (183)
T 3c85_A 105 HVKLVLLA 112 (183)
T ss_dssp CCCEEEEC
T ss_pred CCCEEEEe
Confidence 78988885
No 173
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=53.39 E-value=1.2e+02 Score=27.58 Aligned_cols=30 Identities=13% Similarity=0.151 Sum_probs=19.7
Q ss_pred HHHhCCCCEEEeCCCCCChHHHHHHHHhCCCEEEEecc
Q 023530 176 FLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARY 213 (281)
Q Consensus 176 ~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~DlIVLAgY 213 (281)
.|++.|..+.... .+.+.++++|+|.+=.|
T Consensus 197 ~a~~~G~~~~~~~--------d~~eav~~aDvvy~~~w 226 (307)
T 2i6u_A 197 RAQDTGASVTVTA--------DAHAAAAGADVLVTDTW 226 (307)
T ss_dssp HHHHHTCCEEEES--------CHHHHHTTCSEEEECCS
T ss_pred HHHHcCCeEEEEE--------CHHHHhcCCCEEEecce
Confidence 4446776655542 13466779999999777
No 174
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=53.01 E-value=52 Score=30.01 Aligned_cols=51 Identities=18% Similarity=0.149 Sum_probs=31.6
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEE
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHY 186 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~ 186 (281)
|.||||.+-|+ |..+-.++.. .+ ..++++|.... + ......+++.|+|++.
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~--~p--~~elvav~d~~---~-~~~~~~a~~~g~~~~~ 52 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIK--QP--DMKLVGVAKTS---P-NYEAFIAHRRGIRIYV 52 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT--CT--TEEEEEEECSS---C-SHHHHHHHHTTCCEEC
T ss_pred CeEEEEEecCHHHHHHHHHHHc--CC--CCEEEEEEcCC---h-HHHHHHHHhcCcceec
Confidence 46999999977 5544444432 22 37888875532 2 2345667778888653
No 175
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=52.82 E-value=10 Score=32.36 Aligned_cols=68 Identities=13% Similarity=0.235 Sum_probs=36.6
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCe-eEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPV-EITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~-eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~ 205 (281)
++||+|++.|. |+.+-.-+.+ .|..+. +|. +.|+ ......+.++++|+.+. . + ..+.++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~--~g~~~~~~V~--~~~r---~~~~~~~~~~~~g~~~~--~----~----~~e~~~~a 64 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMIN--KNIVSSNQII--CSDL---NTANLKNASEKYGLTTT--T----D----NNEVAKNA 64 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTSSCGGGEE--EECS---CHHHHHHHHHHHCCEEC--S----C----HHHHHHHC
T ss_pred CCeEEEECccHHHHHHHHHHHh--CCCCCCCeEE--EEeC---CHHHHHHHHHHhCCEEe--C----C----hHHHHHhC
Confidence 36899999998 5444333222 343222 443 4554 22344555666776421 1 1 12344578
Q ss_pred CEEEEec
Q 023530 206 DFLVLAR 212 (281)
Q Consensus 206 DlIVLAg 212 (281)
|+|++|=
T Consensus 65 DvVilav 71 (247)
T 3gt0_A 65 DILILSI 71 (247)
T ss_dssp SEEEECS
T ss_pred CEEEEEe
Confidence 9999874
No 176
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=52.63 E-value=27 Score=32.79 Aligned_cols=50 Identities=16% Similarity=0.222 Sum_probs=32.6
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
+++|+|++-|+ |..+...|.. .| .++++|=.| | ...+.+++.|+++++-+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~--~g---~~vvvId~d-~-----~~v~~~~~~g~~vi~GD 54 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS--SG---VKMVVLDHD-P-----DHIETLRKFGMKVFYGD 54 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TT---CCEEEEECC-H-----HHHHHHHHTTCCCEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CC---CCEEEEECC-H-----HHHHHHHhCCCeEEEcC
Confidence 45799999887 5555555553 34 456655444 2 24567778999998866
No 177
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=52.47 E-value=27 Score=27.65 Aligned_cols=75 Identities=12% Similarity=-0.042 Sum_probs=51.8
Q ss_pred eEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEE
Q 023530 83 VFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVI 162 (281)
Q Consensus 83 ~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Vi 162 (281)
...+.++|. . .+.-=-+|.....+|.++|+..|..+..+- +|-+.+.|....++++++.++.|.-.+.|.-|-
T Consensus 33 i~t~~frV~--G-~VQGVGFR~~v~~~A~~lgL~G~VrN~~dG----~Vei~~eG~~~~v~~f~~~l~~gPp~A~V~~v~ 105 (121)
T 2lxf_A 33 VTTLCYRVT--G-KVQGVFFRKYTKKEADALSLVGYVTNNEDG----SVSGVVQGPKEQVDAFVKYLHKGSPKSVVKKVS 105 (121)
T ss_dssp EEEEEEEEE--E-CTTCCCCHHHHHHHHHHHTCEEEEEECTTS----CEEEEEEEEHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred EEEEEEEEE--E-eeCCcCchHHHHHHHHHcCCEEEEEECCCC----CEEEEEEECHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 555555554 1 222223688888999999999986544332 488888998899999999988875446776654
Q ss_pred eC
Q 023530 163 SN 164 (281)
Q Consensus 163 sn 164 (281)
..
T Consensus 106 ~~ 107 (121)
T 2lxf_A 106 IH 107 (121)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 178
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=52.19 E-value=28 Score=29.39 Aligned_cols=56 Identities=9% Similarity=0.073 Sum_probs=36.5
Q ss_pred CeeEEEEeeCC-hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHHHHHhCCCC-EEEeC
Q 023530 128 KYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIP-YHYLC 188 (281)
Q Consensus 128 ~~rIavl~Sg~-Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~~A~~~gIP-~~~i~ 188 (281)
+.|++|+.||+ +| .+-.++.. .+ .++.+|..|+..+.. ..+.+.|+++||| +++++
T Consensus 2 ~~kvvv~lSGG~DS~~~l~ll~~--~~---~~v~av~~~~g~~~~~e~~~a~~~a~~lgi~~~~vi~ 63 (232)
T 2pg3_A 2 MKRAVVVFSGGQDSTTCLIQALQ--DY---DDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLD 63 (232)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHH--HC---SEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCEEEEecCcHHHHHHHHHHHH--cC---CCEEEEEEECCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 35899999998 34 33334332 34 377777777643211 2467789999999 88776
No 179
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=52.07 E-value=19 Score=28.94 Aligned_cols=62 Identities=16% Similarity=0.089 Sum_probs=40.6
Q ss_pred ccEEEEEEcC---CCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhcc
Q 023530 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (281)
Q Consensus 41 ~~~iltV~G~---DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l 115 (281)
.-..++++|. ++||+.+++.+.|+ |+||.-++|... .. .+.+.++ .++..++++.+-++|..
T Consensus 87 ~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~S---e~-~is~vv~-------~~d~~~a~~~Lh~~f~~ 151 (157)
T 3mah_A 87 DMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGGS---NY-NVSVLVK-------AEDKKKALIALSNKLFN 151 (157)
T ss_dssp EEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECSS---SS-CEEEEEE-------GGGHHHHHHHHHHHHHC
T ss_pred CeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCCC---CC-EEEEEEc-------HHHHHHHHHHHHHHHhc
Confidence 4468899997 68999999999999 999999998542 11 2222233 24456666666666654
No 180
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=51.59 E-value=13 Score=33.02 Aligned_cols=37 Identities=5% Similarity=0.056 Sum_probs=21.6
Q ss_pred CCCCCeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCC
Q 023530 124 DIDPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNH 165 (281)
Q Consensus 124 ~~~~~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~ 165 (281)
.+.+++||+|++.|. |.. +.+|.. .+ ..++++|....
T Consensus 6 ~~~~~~~igiIG~G~~g~~~~~~l~~---~~--~~~~v~v~d~~ 44 (315)
T 3c1a_A 6 ANNSPVRLALIGAGRWGKNYIRTIAG---LP--GAALVRLASSN 44 (315)
T ss_dssp ---CCEEEEEEECTTTTTTHHHHHHH---CT--TEEEEEEEESC
T ss_pred CCCCcceEEEECCcHHHHHHHHHHHh---CC--CcEEEEEEeCC
Confidence 345678999999997 433 333332 12 36788776643
No 181
>3k94_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.10A {Geobacillus thermodenitrificans}
Probab=51.50 E-value=8.2 Score=33.58 Aligned_cols=55 Identities=11% Similarity=-0.066 Sum_probs=35.2
Q ss_pred EEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCC-ChHHHHHHHHh-CCCEEEEecc
Q 023530 158 ITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKEN-EREEELLELVQ-NTDFLVLARY 213 (281)
Q Consensus 158 I~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~-~~e~~l~~~L~-~~DlIVLAgY 213 (281)
.-.++.+ .|.-....+++.++.|+++..+| .|+. +.|.++..+++ +++-|++.|-
T Consensus 44 Pd~ivGD-~DSi~~~~~~~~~~~~~~i~~~p~eKD~TD~e~Al~~a~~~g~~~I~i~Ga 101 (223)
T 3k94_A 44 PVRAFGD-FDSLPAEDVVKLQQAFPDLDVWPAEKDKTDMEIALDWAVEQTARCIRLFGA 101 (223)
T ss_dssp CSEEESC-GGGSCHHHHHHHHHHCTTCCEECCBTTBCHHHHHHHHHHTTCCSEEEEESC
T ss_pred CCEEEeC-cccCCHHHHHHHHhcCCeEEECCCcCCCCHHHHHHHHHHHcCCCEEEEEcC
Confidence 4457777 45444567888888899998887 4442 33556666666 6655555554
No 182
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=51.14 E-value=45 Score=31.14 Aligned_cols=73 Identities=16% Similarity=0.216 Sum_probs=38.0
Q ss_pred CCeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHH---hCCCC-EEEeCCCCCChHHHHHH
Q 023530 127 PKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE---RHGIP-YHYLCAKENEREEELLE 200 (281)
Q Consensus 127 ~~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~---~~gIP-~~~i~~k~~~~e~~l~~ 200 (281)
.++||+|++.|. |.. +.+|.. .+ .+++++|....+ ..+.+.|+ ++|+| ....... +..+.+
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~---~~--~~~lvav~d~~~----~~~~~~a~~~~~~g~~~~~~~~~~----~~~~~~ 85 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMAR---RD--DVEIVAFADPDP----YMVGRAQEILKKNGKKPAKVFGNG----NDDYKN 85 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHT---CT--TEEEEEEECSCH----HHHHHHHHHHHHTTCCCCEEECSS----TTTHHH
T ss_pred CCceEEEEecCHHHHHHHHHHHh---CC--CcEEEEEEeCCH----HHHHHHHHHHHhcCCCCCceeccC----CCCHHH
Confidence 467999999886 322 233322 12 378888765432 23344444 57875 2222200 011335
Q ss_pred HHh--CCCEEEEec
Q 023530 201 LVQ--NTDFLVLAR 212 (281)
Q Consensus 201 ~L~--~~DlIVLAg 212 (281)
+|+ ++|+|++|-
T Consensus 86 ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 86 MLKDKNIDAVFVSS 99 (444)
T ss_dssp HTTCTTCCEEEECC
T ss_pred HhcCCCCCEEEEcC
Confidence 555 578777763
No 183
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=50.87 E-value=42 Score=32.09 Aligned_cols=72 Identities=10% Similarity=0.139 Sum_probs=39.4
Q ss_pred CCeeEEEEeeCC-hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhC
Q 023530 127 PKYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 127 ~~~rIavl~Sg~-Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
.++||+|+++|. |. .+.+|++ .+. .+| ++.|+ ....+.+.+++.++.+..++-. + .+.+.+.+++
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~---~~g--~~V--~v~~R---~~~ka~~la~~~~~~~~~~D~~--d-~~~l~~~l~~ 88 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAA---NDD--INV--TVACR---TLANAQALAKPSGSKAISLDVT--D-DSALDKVLAD 88 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHT---STT--EEE--EEEES---SHHHHHHHHGGGTCEEEECCTT--C-HHHHHHHHHT
T ss_pred CCCEEEEECChHHHHHHHHHHHh---CCC--CeE--EEEEC---CHHHHHHHHHhcCCcEEEEecC--C-HHHHHHHHcC
Confidence 457899999865 32 2333332 222 343 44555 2234556666566666555411 1 2346666778
Q ss_pred CCEEEEe
Q 023530 205 TDFLVLA 211 (281)
Q Consensus 205 ~DlIVLA 211 (281)
+|+||-+
T Consensus 89 ~DvVIn~ 95 (467)
T 2axq_A 89 NDVVISL 95 (467)
T ss_dssp SSEEEEC
T ss_pred CCEEEEC
Confidence 9988865
No 184
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=50.80 E-value=96 Score=26.83 Aligned_cols=78 Identities=8% Similarity=0.070 Sum_probs=45.0
Q ss_pred eeEEEEeeCChhHH---HHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCC-CCC----------h
Q 023530 129 YKVAVLASKQEHCL---VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENE----------R 194 (281)
Q Consensus 129 ~rIavl~Sg~GsnL---~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k-~~~----------~ 194 (281)
+||+++..+.|.-. .+|.+...+. ..+|..+.... . ...+..++.|++++.++.. ... .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~--G~~V~v~~~~~---~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 79 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWLGTAD---R--MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPL 79 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEEECTT---S--THHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc--CCEEEEEecCC---c--chhhhccccCCceEEecCCccCcCccHHHHHHHH
Confidence 79999987765222 3566665432 25777544332 1 1234556679998887621 110 0
Q ss_pred -----HHHHHHHHh--CCCEEEEecc
Q 023530 195 -----EEELLELVQ--NTDFLVLARY 213 (281)
Q Consensus 195 -----e~~l~~~L~--~~DlIVLAgY 213 (281)
-.++.+.++ ++|+|+.-++
T Consensus 80 ~~~~~~~~l~~~l~~~~pDvv~~~~~ 105 (364)
T 1f0k_A 80 RIFNAWRQARAIMKAYKPDVVLGMGG 105 (364)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEECSS
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 123455665 8999999754
No 185
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=50.73 E-value=15 Score=34.69 Aligned_cols=24 Identities=17% Similarity=0.310 Sum_probs=18.5
Q ss_pred CCCCeeEEEEeeCC-hhHHHHHHHh
Q 023530 125 IDPKYKVAVLASKQ-EHCLVDFLYG 148 (281)
Q Consensus 125 ~~~~~rIavl~Sg~-GsnL~aLl~~ 148 (281)
..+|.||+|+++|. |+.|-.++..
T Consensus 31 ~~~p~KI~ViGaGsWGTALA~~la~ 55 (391)
T 4fgw_A 31 AEKPFKVTVIGSGNWGTTIAKVVAE 55 (391)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH
T ss_pred cCCCCeEEEECcCHHHHHHHHHHHH
Confidence 45678999999999 8888877654
No 186
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=50.57 E-value=34 Score=30.68 Aligned_cols=36 Identities=22% Similarity=0.259 Sum_probs=21.9
Q ss_pred CCCeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCC
Q 023530 126 DPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNH 165 (281)
Q Consensus 126 ~~~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~ 165 (281)
.+++||+|++.|. |.. ....+.. .+ .+++++|.+..
T Consensus 5 ~~~~rvgiiG~G~~g~~~~~~~~~~--~~--~~~l~av~d~~ 42 (352)
T 3kux_A 5 ADKIKVGLLGYGYASKTFHAPLIMG--TP--GLELAGVSSSD 42 (352)
T ss_dssp TCCEEEEEECCSHHHHHTHHHHHHT--ST--TEEEEEEECSC
T ss_pred cCCceEEEECCCHHHHHHHHHHHhh--CC--CcEEEEEECCC
Confidence 4568999999997 432 2222332 12 37888887643
No 187
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=50.37 E-value=36 Score=26.42 Aligned_cols=72 Identities=8% Similarity=-0.023 Sum_probs=37.1
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHH--HhCCCCEEEeCCCCCChHHHHHHH-Hh
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL--ERHGIPYHYLCAKENEREEELLEL-VQ 203 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A--~~~gIP~~~i~~k~~~~e~~l~~~-L~ 203 (281)
+.+|+|++.|. |..+-..+.. .| .+|.+|-.| + .......+ ...|+++.+-+. ..++.+.+. ++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~--~g---~~V~vid~~-~---~~~~~~~~~~~~~~~~~i~gd~---~~~~~l~~a~i~ 70 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ--RG---QNVTVISNL-P---EDDIKQLEQRLGDNADVIPGDS---NDSSVLKKAGID 70 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TT---CCEEEEECC-C---HHHHHHHHHHHCTTCEEEESCT---TSHHHHHHHTTT
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CC---CCEEEEECC-C---hHHHHHHHHhhcCCCeEEEcCC---CCHHHHHHcChh
Confidence 35788988766 4444443332 34 466654333 1 11122222 245788777541 123334343 44
Q ss_pred CCCEEEEe
Q 023530 204 NTDFLVLA 211 (281)
Q Consensus 204 ~~DlIVLA 211 (281)
++|+||.+
T Consensus 71 ~ad~vi~~ 78 (153)
T 1id1_A 71 RCRAILAL 78 (153)
T ss_dssp TCSEEEEC
T ss_pred hCCEEEEe
Confidence 89998887
No 188
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=50.18 E-value=73 Score=28.36 Aligned_cols=54 Identities=17% Similarity=0.346 Sum_probs=32.8
Q ss_pred CCCCeeEEEEeeCC-hh--HHHHHHHhhhc-CCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 125 IDPKYKVAVLASKQ-EH--CLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 125 ~~~~~rIavl~Sg~-Gs--nL~aLl~~~~~-g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
+..+|||+++..+. || -+..|.++.++ | .+|..+ +. + ...+..+..|++++.++
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~G---heV~v~-~~-~-----~~~~~~~~~G~~~~~~~ 69 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAG---HEVLVA-AS-E-----NMGPTVTGAGLPFAPTC 69 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTT---CEEEEE-EE-G-----GGHHHHHHTTCCEEEEE
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCC---CEEEEE-cC-H-----HHHHHHHhCCCeeEecC
Confidence 45578999887655 43 23456665543 4 577644 43 2 14577888999998876
No 189
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=49.91 E-value=1.7e+02 Score=27.83 Aligned_cols=126 Identities=13% Similarity=0.109 Sum_probs=60.0
Q ss_pred cchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCC-HHHHHHHHH-HHhhhhcccceeeeecCCCCCee
Q 023530 53 VGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWP-REQMDEDFF-KLSKMFNAMRSVVRVPDIDPKYK 130 (281)
Q Consensus 53 pGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~-~~~L~~~L~-~la~~l~l~~~~~~~~~~~~~~r 130 (281)
+..+.++-..|-+.++|+.-...+++....... .-.++. ..+ .+++.+.+. ++.+-++-.. -.+.... +.+
T Consensus 29 ~~~l~ei~~~Ll~adv~~~~~~~~~~~v~~~~~---~~~v~~-~~~~~~~v~~~l~~eL~~~L~~~~--~~~~~~~-~p~ 101 (443)
T 3dm5_A 29 KELVRDIQRALIQADVNVRLVLQLTREIQRRAL---EEKPPA-GISKKEHIIKIVYEELTKFLGTEA--KPIEIKE-KPT 101 (443)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH---HCCCCT-TCCHHHHHHHHHHHHHHHHTTSSC--CCCCCCS-SSE
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHh---hccccc-cCCcHHHHHHHHHHHHHHHhcCcc--cccccCC-CCe
Confidence 557788889999998887765554421000000 001112 222 334444433 2333333221 1122222 345
Q ss_pred EEEEeeCCh----hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCCh--hHHHHHHhCCCCEEEeC
Q 023530 131 VAVLASKQE----HCLVDFLYGWQEGKLPVEITCVISNHDRGPNS--HVIRFLERHGIPYHYLC 188 (281)
Q Consensus 131 Iavl~Sg~G----snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a--~~~~~A~~~gIP~~~i~ 188 (281)
+.+++...| +....|....+.. ...|..|-++ +-++.+ ....+++..|+|++...
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~--G~kVllv~~D-~~R~aa~eqL~~~~~~~gvpv~~~~ 162 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKR--GYKVGVVCSD-TWRPGAYHQLRQLLDRYHIEVFGNP 162 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTT--TCCEEEEECC-CSSTHHHHHHHHHHGGGTCEEECCT
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHC--CCeEEEEeCC-CcchhHHHHHHHHHHhcCCcEEecC
Confidence 555555455 5555566554432 2366666555 333321 13456777788877644
No 190
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=49.42 E-value=29 Score=25.72 Aligned_cols=57 Identities=14% Similarity=0.065 Sum_probs=43.2
Q ss_pred HHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhh-hcCCCCeeEEEEE
Q 023530 102 MDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGW-QEGKLPVEITCVI 162 (281)
Q Consensus 102 L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~-~~g~l~~eI~~Vi 162 (281)
+|.....+|.++|+..|..+..+- +|-+.+.|....++++++.+ +.|.-.+.|.-|-
T Consensus 19 FR~~v~~~A~~lgL~G~V~N~~dG----~Vei~~eG~~~~i~~f~~~l~~~gP~~a~V~~v~ 76 (92)
T 2gv1_A 19 FRYTTQYEAKRLGLTGYAKNLDDG----SVEVVACGEEGQVEKLMQWLKSGGPRSARVERVL 76 (92)
T ss_dssp CCSHHHHHHHHHTCCCEEEECSSS----CEEEEECSCHHHHHHHHHHHHHTSSTTSEEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEEECCCC----cEEEEEEeCHHHHHHHHHHhhccCCCceEEEEEE
Confidence 466777889999999986443322 68899999988999999998 7773347776653
No 191
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=49.17 E-value=75 Score=27.56 Aligned_cols=78 Identities=12% Similarity=0.137 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCC-hhHH-HHHHHhhhcCCCCeeEEEEEeCCCCCCC---h
Q 023530 97 WPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQ-EHCL-VDFLYGWQEGKLPVEITCVISNHDRGPN---S 171 (281)
Q Consensus 97 ~~~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~-GsnL-~aLl~~~~~g~l~~eI~~Visn~pd~~~---a 171 (281)
.+.++..+++.....+. +. .....+++|..||+ +|.+ -.|+.. .+ . ++++|..+.+..+. .
T Consensus 7 ~~~~~~~~~l~~~l~~~-v~--------~~~~~~vvv~lSGGiDSsv~a~l~~~--~~--~-~~~av~~~~~~~~~~~~~ 72 (249)
T 3fiu_A 7 FSPKEYSQKLVNWLSDS-CM--------NYPAEGFVIGLSGGIDSAVAASLAVK--TG--L-PTTALILPSDNNQHQDMQ 72 (249)
T ss_dssp CCHHHHHHHHHHHHHHH-HH--------TTTCSEEEEECCSSHHHHHHHHHHHH--TT--S-CEEEEECCCTTSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHH-HH--------HhCCCCEEEEecCcHHHHHHHHHHHH--hC--C-CCEEEEecCCCCCHHHHH
Confidence 45666666665554443 11 12345899999998 3443 444433 23 1 34467666431111 2
Q ss_pred hHHHHHHhCCCCEEEeC
Q 023530 172 HVIRFLERHGIPYHYLC 188 (281)
Q Consensus 172 ~~~~~A~~~gIP~~~i~ 188 (281)
.+.+.|+..|||++.++
T Consensus 73 ~a~~~a~~lgi~~~~v~ 89 (249)
T 3fiu_A 73 DALELIEMLNIEHYTIS 89 (249)
T ss_dssp HHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHhCCCEEEEE
Confidence 57889999999999987
No 192
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=48.90 E-value=78 Score=30.30 Aligned_cols=65 Identities=6% Similarity=0.105 Sum_probs=38.6
Q ss_pred CCCHHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHH
Q 023530 96 KWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVI 174 (281)
Q Consensus 96 ~~~~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~ 174 (281)
.++...|...|++.++ .+++.||+|++.|. |+.+- ..+... -..++++|..-++ ..+.
T Consensus 4 ~~~~~~l~~~l~~r~~-------------~~k~IRVGIIGaG~iG~~~~---~~l~~~-~~veLvAV~D~~~----era~ 62 (446)
T 3upl_A 4 NVALVGLARDLAARAE-------------TGKPIRIGLIGAGEMGTDIV---TQVARM-QGIEVGALSARRL----PNTF 62 (446)
T ss_dssp SSCCCHHHHHHHHHHH-------------TTCCEEEEEECCSHHHHHHH---HHHTTS-SSEEEEEEECSST----HHHH
T ss_pred ccchHHHHHHHHHHHh-------------cCCceEEEEECChHHHHHHH---HHHhhC-CCcEEEEEEeCCH----HHHH
Confidence 3455667777776553 35578999999987 44332 222221 1378888776442 3455
Q ss_pred HHHHhC-C
Q 023530 175 RFLERH-G 181 (281)
Q Consensus 175 ~~A~~~-g 181 (281)
+.++++ |
T Consensus 63 ~~a~~~yG 70 (446)
T 3upl_A 63 KAIRTAYG 70 (446)
T ss_dssp HHHHHHHS
T ss_pred HHHHHhcC
Confidence 556554 6
No 193
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=48.76 E-value=17 Score=32.73 Aligned_cols=66 Identities=8% Similarity=0.169 Sum_probs=36.8
Q ss_pred CeeEEEEeeCC-hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCE-EEeCCCCCChHHHHHHHHh-
Q 023530 128 KYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY-HYLCAKENEREEELLELVQ- 203 (281)
Q Consensus 128 ~~rIavl~Sg~-Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~-~~i~~k~~~~e~~l~~~L~- 203 (281)
|+||+|++.|. |. .....+.. .+ .+++++|.+.. .+.++|+++++|- ..+. +.+ ++|+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~--~~--~~~l~av~d~~------~~~~~a~~~~~~~~~~~~----~~~----~ll~~ 63 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMI--RE--TLEVKTIFDLH------VNEKAAAPFKEKGVNFTA----DLN----ELLTD 63 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTT--CT--TEEEEEEECTT------CCHHHHHHHHTTTCEEES----CTH----HHHSC
T ss_pred eeEEEEEccCHHHHHHHHHHHhh--CC--CeEEEEEECCC------HHHHHHHhhCCCCCeEEC----CHH----HHhcC
Confidence 57999999997 33 22223332 11 37888887642 2466777755441 1211 112 4444
Q ss_pred -CCCEEEEe
Q 023530 204 -NTDFLVLA 211 (281)
Q Consensus 204 -~~DlIVLA 211 (281)
++|+|+.|
T Consensus 64 ~~~D~V~i~ 72 (349)
T 3i23_A 64 PEIELITIC 72 (349)
T ss_dssp TTCCEEEEC
T ss_pred CCCCEEEEe
Confidence 57777776
No 194
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=48.31 E-value=57 Score=26.31 Aligned_cols=81 Identities=17% Similarity=0.144 Sum_probs=45.6
Q ss_pred CCeeEEEEeeCCh---hHHHHHHHhhhc-CCCC--eeEEEEEeC--CC-CCCChhHHHHHHhCCCCEEEeCCCCCChHHH
Q 023530 127 PKYKVAVLASKQE---HCLVDFLYGWQE-GKLP--VEITCVISN--HD-RGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (281)
Q Consensus 127 ~~~rIavl~Sg~G---snL~aLl~~~~~-g~l~--~eI~~Visn--~p-d~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~ 197 (281)
.++||.|..+|+- .-.++|+.+.-. ..+. .+|.---+. ++ ..++..+.+.++++||+.- ...+.-. +
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s-~~ar~l~-~-- 78 (163)
T 1u2p_A 3 DPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTD-HRAAQVG-T-- 78 (163)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCC-CCCCBCC-H--
T ss_pred CCCEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCC-ceeeECC-h--
Confidence 4679999999995 445556655321 1121 344332222 21 1256678899999999976 3322211 1
Q ss_pred HHHHHhCCCEEEEeccc
Q 023530 198 LLELVQNTDFLVLARYM 214 (281)
Q Consensus 198 l~~~L~~~DlIVLAgYM 214 (281)
+.+++ |+|+...--
T Consensus 79 --~~~~~-DlIi~Md~~ 92 (163)
T 1u2p_A 79 --EHLAA-DLLVALDRN 92 (163)
T ss_dssp --HHHTS-SEEEESSHH
T ss_pred --hhccC-CEEEEeCHH
Confidence 22348 999986443
No 195
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=48.20 E-value=13 Score=27.02 Aligned_cols=43 Identities=21% Similarity=0.251 Sum_probs=27.1
Q ss_pred HHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 144 DFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 144 aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
..+.+++.|+ +..+.+-.|-++.--.....+|+++|||+++++
T Consensus 18 ~v~kai~~gk--aklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 18 QTVKALKRGS--VKEVVVAKDADPILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHTTTC--EEEEEEETTSCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHcCC--eeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 3445555674 666655555421001346778999999999987
No 196
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=48.13 E-value=25 Score=27.54 Aligned_cols=72 Identities=14% Similarity=0.103 Sum_probs=37.7
Q ss_pred CCCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHH-hCCCCEEEeCCCCCChHHHHHHH-H
Q 023530 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE-RHGIPYHYLCAKENEREEELLEL-V 202 (281)
Q Consensus 126 ~~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~-~~gIP~~~i~~k~~~~e~~l~~~-L 202 (281)
...++|+|++.|. |..+-..+.. .| .+|.++-.| ++ -.+.++ +.|+.+...+. .. .+.+.+. +
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~--~g---~~V~vid~~-~~-----~~~~~~~~~g~~~~~~d~--~~-~~~l~~~~~ 82 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASS--SG---HSVVVVDKN-EY-----AFHRLNSEFSGFTVVGDA--AE-FETLKECGM 82 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH--TT---CEEEEEESC-GG-----GGGGSCTTCCSEEEESCT--TS-HHHHHTTTG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHh--CC---CeEEEEECC-HH-----HHHHHHhcCCCcEEEecC--CC-HHHHHHcCc
Confidence 3457899998877 5444444432 34 466644333 21 123334 56766554331 11 2233332 3
Q ss_pred hCCCEEEEe
Q 023530 203 QNTDFLVLA 211 (281)
Q Consensus 203 ~~~DlIVLA 211 (281)
+++|+|+.+
T Consensus 83 ~~ad~Vi~~ 91 (155)
T 2g1u_A 83 EKADMVFAF 91 (155)
T ss_dssp GGCSEEEEC
T ss_pred ccCCEEEEE
Confidence 479999987
No 197
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=48.00 E-value=39 Score=32.90 Aligned_cols=65 Identities=15% Similarity=0.124 Sum_probs=48.4
Q ss_pred ccEEEEEEcC--CCcchHHHHHHHHHhCCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhhccc
Q 023530 41 THGIHVFHCP--DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (281)
Q Consensus 41 ~~~iltV~G~--DrpGIVa~VS~~La~~giNI~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~ 116 (281)
.-.+++++|. .+||+.+++-+.|+++|+||.-++|... .. . +.+-++ .++..+++..+-+.|...
T Consensus 419 ~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIsqGsS---ei-~--Is~vV~-----~~d~~~Av~aLH~~f~~~ 485 (510)
T 2cdq_A 419 GRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMISQGAS---KV-N--ISFIVN-----EAEAEGCVQALHKSFFES 485 (510)
T ss_dssp EEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEECTT---CS-E--EEEEEE-----HHHHHHHHHHHHHHHHSS
T ss_pred CcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEEecCC---cc-e--EEEEEe-----HHHHHHHHHHHHHHHhcC
Confidence 4578999998 7789999999999999999999998432 21 2 223332 456778888887777653
No 198
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=46.57 E-value=39 Score=27.46 Aligned_cols=82 Identities=10% Similarity=0.028 Sum_probs=44.9
Q ss_pred CCeeEEEEeeCCh---hHHHHHHHhhhc-CCC--CeeE--EEEEeCC-CCCCChhHHHHHHhCCCCEEEeCCCCCChHHH
Q 023530 127 PKYKVAVLASKQE---HCLVDFLYGWQE-GKL--PVEI--TCVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (281)
Q Consensus 127 ~~~rIavl~Sg~G---snL~aLl~~~~~-g~l--~~eI--~~Visn~-pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~ 197 (281)
+|+||.|..+|+- .-.++++.+... -.+ ..+| +++-.-| ...++..+.+.++++||+.-+ ..+.-. +
T Consensus 3 ~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~-~ar~l~-~-- 78 (161)
T 3jvi_A 3 GSMKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDS-ISRPVV-S-- 78 (161)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCCCC-BCCBCC-H--
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCCCC-eeeECC-H--
Confidence 4679999999995 444556554321 111 1344 2332211 111466788999999999732 222111 1
Q ss_pred HHHHHhCCCEEEEeccc
Q 023530 198 LLELVQNTDFLVLARYM 214 (281)
Q Consensus 198 l~~~L~~~DlIVLAgYM 214 (281)
+.+++.|+|+...-.
T Consensus 79 --~~~~~~DlIl~Md~~ 93 (161)
T 3jvi_A 79 --SDFKNFDYIFAMDND 93 (161)
T ss_dssp --HHHHHCSEEEESSHH
T ss_pred --HHhcCCCEEEEeChH
Confidence 123378999986543
No 199
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=45.95 E-value=78 Score=29.92 Aligned_cols=146 Identities=8% Similarity=0.065 Sum_probs=77.3
Q ss_pred HHHHHHHHhCCCeEeEeeeeccCC-CCeEEEEEEEEeCCCCCCHHHHHH------HHHHHhhhhcccceeeeecC--CCC
Q 023530 57 AKLSECIASRGGNILAADVFVPEK-KNVFYSRSEFIFDPIKWPREQMDE------DFFKLSKMFNAMRSVVRVPD--IDP 127 (281)
Q Consensus 57 a~VS~~La~~giNI~dl~q~~~~~-~g~F~mrlev~~p~~~~~~~~L~~------~L~~la~~l~l~~~~~~~~~--~~~ 127 (281)
.+.++.|.++|+..++++.-.+.. .+.+- . -.+..++.- +...+..-+++. +.. .-+
T Consensus 124 ~~l~~~l~~~~it~ia~E~i~r~~ra~~l~--------~-ls~~s~iAGy~Av~~aa~~l~~~~~~l-----~t~~g~v~ 189 (405)
T 4dio_A 124 EEAISAMAGAGLTTFAMELMPRITRAQSMD--------V-LSSQANLAGYQAVIDAAYEYDRALPMM-----MTAAGTVP 189 (405)
T ss_dssp HHHHHHHHHTTCEEEEGGGSCCSGGGGGGC--------H-HHHHHHHHHHHHHHHHHHHCSSCSSCE-----EETTEEEC
T ss_pred HHHHHHHHHCCCeEEEeeccccccccCccc--------e-ecchhHHHHHHHHHHHHHHhHhhhchh-----hccCCCcC
Confidence 678899999999998888743211 11110 0 001222222 222222222221 111 113
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCC----------C----C
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK----------E----N 192 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k----------~----~ 192 (281)
+.||+|++.|. |.+.-.++.. .| ++|. +.|+ ....++.++++|.++..++.. . .
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~--lG---a~V~--v~D~----~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s 258 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARR--LG---AVVS--ATDV----RPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMS 258 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECS----STTHHHHHHHTTCEECCCCC-----------------
T ss_pred CCEEEEECCcHHHHHHHHHHHH--CC---CEEE--EEcC----CHHHHHHHHHcCCceeecccccccccccccchhhhcc
Confidence 56999999987 5655555554 24 5543 4553 112367778888765443200 0 0
Q ss_pred Ch-----HHHHHHHHhCCCEEEEec------ccccCChhHHhhhcC
Q 023530 193 ER-----EEELLELVQNTDFLVLAR------YMQPVPLQKEAYLGY 227 (281)
Q Consensus 193 ~~-----e~~l~~~L~~~DlIVLAg------YMrILs~~fl~~~~~ 227 (281)
+. .+.+.+.++++|+|+.+= =-.+++++.++..+.
T Consensus 259 ~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~ 304 (405)
T 4dio_A 259 GEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKP 304 (405)
T ss_dssp CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCT
T ss_pred hhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCC
Confidence 00 124566677999999862 224678888887763
No 200
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=45.73 E-value=1.4e+02 Score=27.13 Aligned_cols=16 Identities=13% Similarity=0.297 Sum_probs=12.2
Q ss_pred HHHHHhCCCEEEEecc
Q 023530 198 LLELVQNTDFLVLARY 213 (281)
Q Consensus 198 l~~~L~~~DlIVLAgY 213 (281)
+.+.++++|+|.+=.|
T Consensus 217 ~~eav~~aDvvy~~~w 232 (315)
T 1pvv_A 217 PVKAVKDADVIYTDVW 232 (315)
T ss_dssp HHHHTTTCSEEEECCC
T ss_pred HHHHhCCCCEEEEcce
Confidence 3356678999999777
No 201
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=45.67 E-value=54 Score=29.55 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=21.3
Q ss_pred CCeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCC
Q 023530 127 PKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNH 165 (281)
Q Consensus 127 ~~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~ 165 (281)
+++||+|++.|. |.. ....+... + .+++++|....
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~--~--~~~l~av~d~~ 40 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVL--D--EYQISKIMTSR 40 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTC--T--TEEEEEEECSC
T ss_pred CcceEEEEccCHHHHHHHHHHHhhC--C--CeEEEEEEcCC
Confidence 468999999987 332 22233321 2 37888876643
No 202
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=45.60 E-value=44 Score=27.59 Aligned_cols=83 Identities=13% Similarity=0.179 Sum_probs=45.9
Q ss_pred CCCCeeEEEEeeCCh---hHHHHHHHhhh-cCCCC--eeE--EEEEeCCC-CCCChhHHHHHHhCCCCEEEeCCCCCChH
Q 023530 125 IDPKYKVAVLASKQE---HCLVDFLYGWQ-EGKLP--VEI--TCVISNHD-RGPNSHVIRFLERHGIPYHYLCAKENERE 195 (281)
Q Consensus 125 ~~~~~rIavl~Sg~G---snL~aLl~~~~-~g~l~--~eI--~~Visn~p-d~~~a~~~~~A~~~gIP~~~i~~k~~~~e 195 (281)
.+.|+||.|..+|+- .-.++++...- ...+. .+| +++-.-+. ..++..+.+.++++||+.-..-.+.-. +
T Consensus 15 ~~~M~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~~G~~~d~~a~~~l~~~Gid~s~h~ar~l~-~ 93 (173)
T 4etm_A 15 RGSMISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWHIGNPPHEGTQEILRREGISFDGMLARQVS-E 93 (173)
T ss_dssp CSSCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCTTCCCCBCC-H
T ss_pred CCCccEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccCCCCCCCCHHHHHHHHHCCccccCCccccCC-H
Confidence 356789999999995 44555655431 11121 344 33322221 114566889999999986422111111 1
Q ss_pred HHHHHHHhCCCEEEEec
Q 023530 196 EELLELVQNTDFLVLAR 212 (281)
Q Consensus 196 ~~l~~~L~~~DlIVLAg 212 (281)
+.+++.|+|+...
T Consensus 94 ----~d~~~~DlIl~Md 106 (173)
T 4etm_A 94 ----QDLDDFDYIIAMD 106 (173)
T ss_dssp ----HHHHHCSEEEESS
T ss_pred ----hhcCCCCEEEEeC
Confidence 2233689998854
No 203
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=45.52 E-value=55 Score=31.42 Aligned_cols=55 Identities=20% Similarity=0.091 Sum_probs=39.3
Q ss_pred eeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHHHHHhCCCCEEEeC
Q 023530 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 129 ~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~~A~~~gIP~~~i~ 188 (281)
.|+++..||+- +.+-.++... | .++.+|..|+.-.+. ..+.+.|+++|||+++++
T Consensus 210 ~kvvvalSGGvDSsvla~ll~~~--g---~~v~av~vd~g~~~~~e~~~v~~~~~~lgi~~~vv~ 269 (503)
T 2ywb_A 210 DRVLLAVSGGVDSSTLALLLAKA--G---VDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVD 269 (503)
T ss_dssp SEEEEEECSSHHHHHHHHHHHHH--T---CEEEEEEEECSCSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred ccEEEEecCCcchHHHHHHHHHc--C---CeEEEEEEeCCCCChHHHHHHHHHHHHhCCCEEEEE
Confidence 58999999973 4455555543 4 478888888642211 357888999999999987
No 204
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=44.90 E-value=31 Score=29.38 Aligned_cols=20 Identities=25% Similarity=0.326 Sum_probs=13.7
Q ss_pred CCeeEEEEeeCC-hhHHHHHH
Q 023530 127 PKYKVAVLASKQ-EHCLVDFL 146 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl 146 (281)
..+||+|++.|. |+.+-..+
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L 38 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGAL 38 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHH
Confidence 457999999988 65554433
No 205
>3brv_A Inhibitor of nuclear factor kappa-B kinase subuni; NEMO, IKK-gamma, FIP3, ikkap1, NF-KB essential modulator, at binding, kinase, nucleotide-binding, phosphoprotein; 2.20A {Synthetic} PDB: 3brt_A
Probab=44.18 E-value=5.7 Score=26.67 Aligned_cols=30 Identities=23% Similarity=0.334 Sum_probs=26.2
Q ss_pred chhhhhhhhhhhheeecccccccCCCCccC
Q 023530 3 LLRRLSSSLQQVVKFTNRSFKSLKFPGEPI 32 (281)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (281)
+++||+|.+|+..+=+..|+-+|.|-+++.
T Consensus 18 ~~~~L~sliqdt~~eq~~Slm~lDwSWL~~ 47 (48)
T 3brv_A 18 LCTLLENAIQDTVREQDQSFTALDWSWLQT 47 (48)
T ss_dssp HHHHHHHHHHHHHHHTTSCGGGSCCGGGC-
T ss_pred HHHHHHHHHHHHHHHHhcchhhhhhhhhcc
Confidence 578999999999999999999998887764
No 206
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=43.97 E-value=1.2e+02 Score=27.62 Aligned_cols=31 Identities=10% Similarity=0.176 Sum_probs=19.6
Q ss_pred HHHHhCCCCEEEeCCCCCChHHHHHHHHhCCCEEEEecc
Q 023530 175 RFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARY 213 (281)
Q Consensus 175 ~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~DlIVLAgY 213 (281)
+.|++.|..+.... .+.+.++++|+|.+=.|
T Consensus 215 ~~a~~~G~~v~~~~--------d~~eav~~aDvvyt~~w 245 (325)
T 1vlv_A 215 EIVKETDGSVSFTS--------NLEEALAGADVVYTDVW 245 (325)
T ss_dssp HHHHHHCCEEEEES--------CHHHHHTTCSEEEECCC
T ss_pred HHHHHcCCeEEEEc--------CHHHHHccCCEEEeccc
Confidence 34447776555532 13466778999988766
No 207
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=43.96 E-value=34 Score=28.38 Aligned_cols=81 Identities=6% Similarity=0.052 Sum_probs=45.6
Q ss_pred CCCCeeEEEEeeCChhHHHHHHHhhhc-CCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCCChH---HHHH
Q 023530 125 IDPKYKVAVLASKQEHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENERE---EELL 199 (281)
Q Consensus 125 ~~~~~rIavl~Sg~GsnL~aLl~~~~~-g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~~~e---~~l~ 199 (281)
..+++|++|+.+|.-- .+.+ .. |+.. =+|. ....++.+++|..+.... -++ +.+ +++.
T Consensus 12 ~~~~~rv~IittGde~-~~~~----~~~G~i~------Dsn~-----~~L~~~l~~~G~~v~~~~iv~D-d~~~I~~al~ 74 (178)
T 2pjk_A 12 APKSLNFYVITISTSR-YEKL----LKKEPIV------DESG-----DIIKQLLIENGHKIIGYSLVPD-DKIKILKAFT 74 (178)
T ss_dssp -CCCCEEEEEEECHHH-HHHH----HTTCCCC------CHHH-----HHHHHHHHHTTCEEEEEEEECS-CHHHHHHHHH
T ss_pred CCCCCEEEEEEeCccc-cccc----ccCCeEe------ehHH-----HHHHHHHHHCCCEEEEEEEeCC-CHHHHHHHHH
Confidence 4567899999999632 2222 23 4310 0222 235667888998765543 111 222 3344
Q ss_pred HHHhC--CCEEEEecccccCChhHH
Q 023530 200 ELVQN--TDFLVLARYMQPVPLQKE 222 (281)
Q Consensus 200 ~~L~~--~DlIVLAgYMrILs~~fl 222 (281)
+++++ +|+|++.|=.-.=+.++.
T Consensus 75 ~a~~~~~~DlVittGG~s~g~~D~t 99 (178)
T 2pjk_A 75 DALSIDEVDVIISTGGTGYSPTDIT 99 (178)
T ss_dssp HHHTCTTCCEEEEESCCSSSTTCCH
T ss_pred HHHhcCCCCEEEECCCCCCCCCcch
Confidence 44444 999999987666555544
No 208
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=43.70 E-value=62 Score=28.71 Aligned_cols=64 Identities=16% Similarity=0.152 Sum_probs=35.3
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCC
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~ 205 (281)
.++||+|++.|. |..+-..+.. .| .+|. +.|+ +....+.+.+.|+.+. . + +.+.++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~--~G---~~V~--~~dr----~~~~~~~l~~~g~~~~--~----~----~~e~~~~a 88 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE--AG---YALQ--VWNR----TPARAASLAALGATIH--E----Q----ARAAARDA 88 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH--TT---CEEE--EECS----CHHHHHHHHTTTCEEE--S----S----HHHHHTTC
T ss_pred CCCEEEEECccHHHHHHHHHHHh--CC---CeEE--EEcC----CHHHHHHHHHCCCEee--C----C----HHHHHhcC
Confidence 457999999998 6555443332 34 3544 3464 2222334444465321 1 1 22455678
Q ss_pred CEEEEe
Q 023530 206 DFLVLA 211 (281)
Q Consensus 206 DlIVLA 211 (281)
|+|+++
T Consensus 89 DvVi~~ 94 (320)
T 4dll_A 89 DIVVSM 94 (320)
T ss_dssp SEEEEC
T ss_pred CEEEEE
Confidence 888887
No 209
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=43.67 E-value=16 Score=34.81 Aligned_cols=55 Identities=13% Similarity=0.086 Sum_probs=36.0
Q ss_pred eEEEEeeCChhHHHHHHH------hhh--cCC-CCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 130 KVAVLASKQEHCLVDFLY------GWQ--EGK-LPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 130 rIavl~Sg~GsnL~aLl~------~~~--~g~-l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
-++|.+|++|+..+-+.. ... .|+ ....+++|-+| ++.+..+.|+++||+++.++
T Consensus 118 TlviviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~~vavT~~----~~s~L~~~a~~~Gi~~f~~~ 181 (415)
T 1zzg_A 118 TLVNAVSKSGSTAETLAGLAVFLKWLKAHLGEDWRRHLVVTTDP----KEGPLRAFAEREGLKAFAIP 181 (415)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHHHHHHHGGGGGGGEEEEECS----SSSHHHHHHHHHTCEEEECC
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHHHHHHhcCccccCeEEEEeCC----CCChHHHHHHHhCCcEEEec
Confidence 488999999955554421 111 131 12456655444 36788999999999988887
No 210
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=43.44 E-value=16 Score=31.38 Aligned_cols=48 Identities=15% Similarity=0.272 Sum_probs=26.7
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCE
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~ 184 (281)
++||+|++.|. |+.+-..+.. .| .+++.+ .++ ....+.+.++++|+.+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~--~g---~~~v~~-~~~---~~~~~~~~~~~~g~~~ 58 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYR--KG---FRIVQV-YSR---TEESARELAQKVEAEY 58 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHH--HT---CCEEEE-ECS---SHHHHHHHHHHTTCEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHH--CC---CeEEEE-EeC---CHHHHHHHHHHcCCce
Confidence 46899999987 5544433332 34 354444 444 2234455666667653
No 211
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=43.26 E-value=66 Score=27.61 Aligned_cols=82 Identities=12% Similarity=0.201 Sum_probs=47.1
Q ss_pred CCCeeEEEEeeCCh---hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHH
Q 023530 126 DPKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (281)
Q Consensus 126 ~~~~rIavl~Sg~G---snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L 202 (281)
..++||.|..+|+. .-.++++.....+.+ +|.---+.....++..+.+.++++||+......+.-. + +.+
T Consensus 79 ~~~~~VLFVCtgN~cRSpmAEal~~~~~~~~~--~v~SAGt~~g~~~dp~a~~vl~e~Gidis~~~sr~l~-~----~~~ 151 (213)
T 3t38_A 79 SPVPQVLFICVHNAGRSQIASALLSHYAGSSV--EVRSAGSLPASEIHPLVLEILSERGVNISDAFPKPLT-D----DVI 151 (213)
T ss_dssp SCCCEEEEEESSSSSHHHHHHHHHHHHHGGGC--EEEEEESSCCSSCCHHHHHHHHHTTCCCTTCCCCBCC-H----HHH
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHHhccCce--EEEecccCCCCCCCHHHHHHHHHcCCCcccCcCCcCC-H----HHh
Confidence 45789999999995 444566665543333 3332223211115667889999999985321112111 1 122
Q ss_pred hCCCEEEEeccc
Q 023530 203 QNTDFLVLARYM 214 (281)
Q Consensus 203 ~~~DlIVLAgYM 214 (281)
++.|+|+..+-.
T Consensus 152 ~~~DlIitMd~~ 163 (213)
T 3t38_A 152 RASDYVITMGCG 163 (213)
T ss_dssp HHCSEEEESSCC
T ss_pred ccCCEEEEecCc
Confidence 378999997543
No 212
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=42.64 E-value=79 Score=25.17 Aligned_cols=80 Identities=14% Similarity=0.104 Sum_probs=45.7
Q ss_pred CeeEEEEeeCCh---hHHHHHHHhhhcCCCCeeEEEEEeCCC-CCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHD-RGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 128 ~~rIavl~Sg~G---snL~aLl~~~~~g~l~~eI~~Visn~p-d~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
++||.|..+|+- .-.++|+.+.. +++.+.=+++-. ++ ..++..+.+.++++||+......+.-. + +.++
T Consensus 8 m~~VLFVC~gN~cRSpmAEal~r~~~-~~~~v~SAGt~~-~~g~~~~p~a~~~l~e~Gid~~~~~ar~l~-~----~~~~ 80 (150)
T 2wmy_A 8 FDSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA-LVDHTADESAIRVAEKNGLCLKGHRGTKFT-S----ALAR 80 (150)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHC-TTSEEEEEETTC-CTTCCCCHHHHHHHHHTTCCCTTCCCCBCC-H----HHHT
T ss_pred cCEEEEEcCCchHHHHHHHHHHHHhc-CCCEEEeccccC-CCCCCCCHHHHHHHHHcCCCccCCcccCCC-H----HHhc
Confidence 458999999995 44566666543 333222233322 22 114567889999999986322111111 1 1234
Q ss_pred CCCEEEEeccc
Q 023530 204 NTDFLVLARYM 214 (281)
Q Consensus 204 ~~DlIVLAgYM 214 (281)
+.|+|+...--
T Consensus 81 ~~DlIi~m~~~ 91 (150)
T 2wmy_A 81 QYDLLLVMEYS 91 (150)
T ss_dssp TCSEEEESCHH
T ss_pred cCCEEEEcCHH
Confidence 89999986543
No 213
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=42.64 E-value=69 Score=28.18 Aligned_cols=51 Identities=12% Similarity=0.103 Sum_probs=31.9
Q ss_pred CeeEEEEeeCC-hhH--HHHHHHhhh-cCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 128 KYKVAVLASKQ-EHC--LVDFLYGWQ-EGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 128 ~~rIavl~Sg~-Gsn--L~aLl~~~~-~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
|+||.++..+. ||. +..|.++.+ .| ++|..+ +.. ...+..++.|++++.++
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~G---heV~v~-~~~------~~~~~~~~~G~~~~~~~ 58 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRG---HRITYV-TTP------LFADEVKAAGAEVVLYK 58 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTT---CEEEEE-ECH------HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCC---CEEEEE-cCH------HHHHHHHHcCCEEEecc
Confidence 45898887775 432 333455443 34 577654 431 24667788999998876
No 214
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=42.24 E-value=1.2e+02 Score=28.84 Aligned_cols=86 Identities=14% Similarity=0.086 Sum_probs=51.2
Q ss_pred CCCeeEEEEeeCChhHHH-HHHHhhhcCCCCeeEEEEEeCCCCCCC----------hhHHHHHHhCCCCEEEeCCCCCCh
Q 023530 126 DPKYKVAVLASKQEHCLV-DFLYGWQEGKLPVEITCVISNHDRGPN----------SHVIRFLERHGIPYHYLCAKENER 194 (281)
Q Consensus 126 ~~~~rIavl~Sg~GsnL~-aLl~~~~~g~l~~eI~~Visn~pd~~~----------a~~~~~A~~~gIP~~~i~~k~~~~ 194 (281)
..++|+.|.+..+|--+. ++..+.+.| +.+++|--+++.... +...+.+++.|.....++-+-.+.
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~G---A~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~ 124 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYG---AATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSD 124 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCC---CCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCH
Confidence 457788888888875443 233333445 577777666543211 235677889999988877332233
Q ss_pred H--HHHHHHHh----CCCEEEE-eccc
Q 023530 195 E--EELLELVQ----NTDFLVL-ARYM 214 (281)
Q Consensus 195 e--~~l~~~L~----~~DlIVL-AgYM 214 (281)
| +++.+.++ ++|++|= ++|-
T Consensus 125 e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 125 EIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 3 34555554 6999885 3444
No 215
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=42.16 E-value=33 Score=30.98 Aligned_cols=35 Identities=11% Similarity=0.052 Sum_probs=21.7
Q ss_pred CCeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCC
Q 023530 127 PKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNH 165 (281)
Q Consensus 127 ~~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~ 165 (281)
+++||+|++.|. |.. ....+... + .+++++|..-.
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~--~--~~~l~av~d~~ 40 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTN--P--HFELYKIVERS 40 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHC--T--TEEEEEEECSS
T ss_pred CceEEEEECCCHHHHHHHHHHHhhC--C--CeEEEEEEcCC
Confidence 468999999987 332 22233321 2 37898887654
No 216
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=42.12 E-value=12 Score=33.65 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=21.7
Q ss_pred CeeEEEEeeCC-hhH--HHHHHHhhhcCCCCeeEEEEEeCCC
Q 023530 128 KYKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNHD 166 (281)
Q Consensus 128 ~~rIavl~Sg~-Gsn--L~aLl~~~~~g~l~~eI~~Visn~p 166 (281)
|+||+|++.|. |.. +.+++.. .. .+++++|.+..+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~--~~--~~~l~av~d~~~ 39 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNR--KD--SWHVAHIFRRHA 39 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTC--TT--TEEEEEEECSSC
T ss_pred ceEEEEEecCHHHHHHHHHHHHhc--CC--CeEEEEEEcCCH
Confidence 57999999997 432 2213332 11 378998887653
No 217
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=41.59 E-value=68 Score=28.64 Aligned_cols=70 Identities=16% Similarity=0.052 Sum_probs=37.0
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHH-HHhCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLE-LVQNT 205 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~-~L~~~ 205 (281)
.+||+|++.|. |..+-..+.+ .|. ..+| ++.|+ +....+.|.+.|+-...... +.+ .++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~--~G~-~~~V--~~~dr----~~~~~~~a~~~G~~~~~~~~--------~~~~~~~~a 95 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR--SGF-KGKI--YGYDI----NPESISKAVDLGIIDEGTTS--------IAKVEDFSP 95 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH--TTC-CSEE--EEECS----CHHHHHHHHHTTSCSEEESC--------TTGGGGGCC
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CCC-CCEE--EEEEC----CHHHHHHHHHCCCcchhcCC--------HHHHhhccC
Confidence 47999999987 5444333322 342 2244 34554 23346677888874222221 112 34467
Q ss_pred CEEEEeccc
Q 023530 206 DFLVLARYM 214 (281)
Q Consensus 206 DlIVLAgYM 214 (281)
|+||+|=.-
T Consensus 96 DvVilavp~ 104 (314)
T 3ggo_A 96 DFVMLSSPV 104 (314)
T ss_dssp SEEEECSCG
T ss_pred CEEEEeCCH
Confidence 777777433
No 218
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=40.80 E-value=38 Score=29.13 Aligned_cols=47 Identities=17% Similarity=0.022 Sum_probs=26.4
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP 183 (281)
|+||+|++.|. |+.+-..+.. .|. ..+|. +.++ +....+.+++.|+.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~--~g~-~~~V~--~~d~----~~~~~~~~~~~g~~ 48 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRR--SGF-KGKIY--GYDI----NPESISKAVDLGII 48 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHH--TTC-CSEEE--EECS----CHHHHHHHHHTTSC
T ss_pred CcEEEEEecCHHHHHHHHHHHh--cCC-CcEEE--EEeC----CHHHHHHHHHCCCc
Confidence 46899999988 5555443432 342 22443 3453 22335567777864
No 219
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=40.74 E-value=30 Score=27.15 Aligned_cols=83 Identities=17% Similarity=0.161 Sum_probs=47.9
Q ss_pred CeeEEEEeeCCh---hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhC
Q 023530 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 128 ~~rIavl~Sg~G---snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
|+||.|..+|+- .-.++|+.+...+.+.+.=+++-.+. ++..+.+.++++||+......+. -++ +.+++
T Consensus 4 m~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~g~~---~~~~a~~~l~e~Gid~s~~~sr~--l~~---~~~~~ 75 (134)
T 2l17_A 4 MKKVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLESSR---VHPTAIAMMEEVGIDISGQTSDP--IEN---FNADD 75 (134)
T ss_dssp CEEEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCTTSS---CCHHHHHHHHTTTCCCSSCCCCC--GGG---CCGGG
T ss_pred CCEEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCCCCC---CCHHHHHHHHHcCCCcccCcccc--CCh---HHhcc
Confidence 569999999995 44566666654333222222333222 56678999999999863221111 110 11237
Q ss_pred CCEEEEe-cccccCC
Q 023530 205 TDFLVLA-RYMQPVP 218 (281)
Q Consensus 205 ~DlIVLA-gYMrILs 218 (281)
.|+|+.. +--+..+
T Consensus 76 ~DlIi~md~~~~~~p 90 (134)
T 2l17_A 76 YDVVISLCGCGVNLP 90 (134)
T ss_dssp CSEEEECSCSCSCCC
T ss_pred CCEEEEeCchhhhCc
Confidence 9999998 5544443
No 220
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=39.97 E-value=27 Score=26.06 Aligned_cols=48 Identities=10% Similarity=0.133 Sum_probs=27.9
Q ss_pred EeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEe
Q 023530 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187 (281)
Q Consensus 134 l~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i 187 (281)
+++|.-..+. +++.|+ +..+.+-+|-|+.--.....+|++++||++.+
T Consensus 16 ~v~G~~~v~k----ai~~gk--a~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 16 VVLGSNETIR----LAKTGG--AKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp EEESHHHHHH----HHHHTC--CSEEEEECCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EeECHHHHHH----HHHcCC--ccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 4455444444 444564 56666666642110134677899999998776
No 221
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=39.77 E-value=39 Score=26.25 Aligned_cols=52 Identities=17% Similarity=0.294 Sum_probs=31.0
Q ss_pred HHHhhhcCCCCeeEEEEEeCCCCCC-ChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 145 FLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 145 Ll~~~~~g~l~~eI~~Visn~pd~~-~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
.+.+++.|. +..+.+-+|-++.. -..+..+|+++|||+.+++.+ .+|=+++-
T Consensus 28 v~kai~~gk--akLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk-----~eLG~a~g 80 (121)
T 2lbw_A 28 VVKALRKGE--KGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSK-----QDLGAAGA 80 (121)
T ss_dssp HHHHHHHSC--CCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCH-----HHHHHHHT
T ss_pred HHHHHHcCC--ceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCH-----HHHHHHhC
Confidence 344444564 56776666643210 124678999999999987622 24555554
No 222
>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold, gluconeogenesis, glycolysis, structural genomics; HET: G6Q; 1.65A {Staphylococcus aureus subsp} SCOP: c.80.1.2 PDB: 3ifs_A*
Probab=39.74 E-value=28 Score=33.48 Aligned_cols=73 Identities=12% Similarity=-0.017 Sum_probs=46.0
Q ss_pred CCCHHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHh------h--hcCC--CCeeEEEEEeCC
Q 023530 96 KWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYG------W--QEGK--LPVEITCVISNH 165 (281)
Q Consensus 96 ~~~~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~------~--~~g~--l~~eI~~Visn~ 165 (281)
.+|.+.+.+.++.+ +. ..-+.|.+|++|+..+-+..+ . +.|. ....+++| ||.
T Consensus 117 nvDp~~i~~~l~~l----~~------------~~Tl~iViSKSgtT~ET~~n~~~~r~~l~~~~g~~~~~~h~vav-T~~ 179 (446)
T 3ff1_A 117 HLSSTYTKELVDYL----AD------------KDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFAT-TDK 179 (446)
T ss_dssp SCCHHHHHHHHHHG----GG------------CCEEEEEECSSSCCHHHHHHHHHHHHHHHHHHCHHHHHHHEEEE-ECS
T ss_pred CCCHHHHHHHHHhc----Cc------------cceEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCcccccceEEEE-eCC
Confidence 56777777766543 22 224778899999665554321 1 1131 11246765 875
Q ss_pred CCCCChhHHHHHHhCCCCEEEeC
Q 023530 166 DRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 166 pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
...+..+.|+++||+++.++
T Consensus 180 ---~~g~L~~~a~~~G~~~F~~~ 199 (446)
T 3ff1_A 180 ---EKGALKQLATNEGYETFIVP 199 (446)
T ss_dssp ---SCSHHHHHHHHHTCEEEECC
T ss_pred ---CcchhhhHHHHcCCeEEEec
Confidence 33578899999999988887
No 223
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=38.45 E-value=50 Score=29.50 Aligned_cols=74 Identities=15% Similarity=0.225 Sum_probs=38.7
Q ss_pred CeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCCCE
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~Dl 207 (281)
|+||+|+++|. ...+....+-+.| .++++|=.| ++++...+|.+ +++++.. .+.+.+++..+++|.
T Consensus 1 MK~I~ilGgg~-~g~~~~~~Ak~~G---~~vv~vd~~----~~~~~~~~aD~----~~~~~~~--~d~~~~~~~~~~~D~ 66 (363)
T 4ffl_A 1 MKTICLVGGKL-QGFEAAYLSKKAG---MKVVLVDKN----PQALIRNYADE----FYCFDVI--KEPEKLLELSKRVDA 66 (363)
T ss_dssp CCEEEEECCSH-HHHHHHHHHHHTT---CEEEEEESC----TTCTTTTTSSE----EEECCTT--TCHHHHHHHHTSSSE
T ss_pred CCEEEEECCCH-HHHHHHHHHHHCC---CEEEEEeCC----CCChhHhhCCE----EEECCCC--cCHHHHHHHhcCCCE
Confidence 67999998774 2223333332334 677766333 45555544432 3444411 122345454458998
Q ss_pred EEEeccccc
Q 023530 208 LVLARYMQP 216 (281)
Q Consensus 208 IVLAgYMrI 216 (281)
|+. +|.-+
T Consensus 67 v~~-~~~~~ 74 (363)
T 4ffl_A 67 VLP-VNENL 74 (363)
T ss_dssp EEE-CCCCH
T ss_pred EEE-CCCCh
Confidence 765 55543
No 224
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=38.10 E-value=2.2e+02 Score=26.23 Aligned_cols=29 Identities=17% Similarity=0.213 Sum_probs=18.3
Q ss_pred HHhCCCCEEEeCCCCCChHHHHHHHHhCCCEEEEecc
Q 023530 177 LERHGIPYHYLCAKENEREEELLELVQNTDFLVLARY 213 (281)
Q Consensus 177 A~~~gIP~~~i~~k~~~~e~~l~~~L~~~DlIVLAgY 213 (281)
|++.|..+.... .+.+.++++|+|.+-+|
T Consensus 228 a~~~G~~v~~~~--------d~~eav~~aDVvyt~~w 256 (340)
T 4ep1_A 228 AKETGAEIEILH--------NPELAVNEADFIYTDVW 256 (340)
T ss_dssp HHHHCCCEEEES--------CHHHHHTTCSEEEECCC
T ss_pred HHHcCCeEEEEC--------CHHHHhCCCCEEEecCc
Confidence 345565554432 13466778999998777
No 225
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=38.01 E-value=32 Score=28.11 Aligned_cols=75 Identities=11% Similarity=0.164 Sum_probs=41.4
Q ss_pred CCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCCh-hHHHHHHhCCCCEEEeC-CCCCC-hHHHHHHHHh
Q 023530 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNS-HVIRFLERHGIPYHYLC-AKENE-REEELLELVQ 203 (281)
Q Consensus 127 ~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a-~~~~~A~~~gIP~~~i~-~k~~~-~e~~l~~~L~ 203 (281)
+++|++|+.+|.- ++ .|+ +-| .+. ...++.+++|+.+.... -++++ -.+++.++++
T Consensus 6 ~~~rv~ii~tGdE-----l~----~G~--------i~D----sn~~~l~~~l~~~G~~v~~~~iv~Dd~~i~~al~~a~~ 64 (164)
T 3pzy_A 6 TTRSARVIIASTR-----AS----SGE--------YED----RCGPIITEWLAQQGFSSAQPEVVADGSPVGEALRKAID 64 (164)
T ss_dssp -CCEEEEEEECHH-----HH----C------------C----CHHHHHHHHHHHTTCEECCCEEECSSHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCC-----CC----CCc--------eee----HHHHHHHHHHHHCCCEEEEEEEeCCHHHHHHHHHHHHh
Confidence 4679999999852 22 232 122 133 35567788887654332 11211 1134555665
Q ss_pred -CCCEEEEecccccCChhHH
Q 023530 204 -NTDFLVLARYMQPVPLQKE 222 (281)
Q Consensus 204 -~~DlIVLAgYMrILs~~fl 222 (281)
++|+|+..|=.-.=+.++.
T Consensus 65 ~~~DlVittGG~s~g~~D~t 84 (164)
T 3pzy_A 65 DDVDVILTSGGTGIAPTDST 84 (164)
T ss_dssp TTCSEEEEESCCSSSTTCCH
T ss_pred CCCCEEEECCCCCCCCCccH
Confidence 7999999986665554443
No 226
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=37.94 E-value=1.3e+02 Score=26.68 Aligned_cols=91 Identities=12% Similarity=0.055 Sum_probs=51.0
Q ss_pred CCeeEEEEeeCC-hh--HHHHHHHhhhcCCCCeeEEEEEeCCCCCCC-----------------------------hhHH
Q 023530 127 PKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPN-----------------------------SHVI 174 (281)
Q Consensus 127 ~~~rIavl~Sg~-Gs--nL~aLl~~~~~g~l~~eI~~Visn~pd~~~-----------------------------a~~~ 174 (281)
+++||+|++.|. |. -+.+|... + .+++++|.+..+++.+ ....
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~---~--~~~lvav~d~~~~~~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~ 98 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKN---A--NFKLVATASRHGTVEGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAA 98 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHC---T--TEEEEEEECSSCCCTTSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHH
T ss_pred CCceEEEEecCHHHHHHHHHHHHhC---C--CeEEEEEEeCChhhcCCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHH
Confidence 357999999987 32 23333321 2 3688887765433211 1234
Q ss_pred HHHHhCCCCEEEeCCCC-CCh-H-HHHHHHHhCCCEEEEecccccCChhHHh
Q 023530 175 RFLERHGIPYHYLCAKE-NER-E-EELLELVQNTDFLVLARYMQPVPLQKEA 223 (281)
Q Consensus 175 ~~A~~~gIP~~~i~~k~-~~~-e-~~l~~~L~~~DlIVLAgYMrILs~~fl~ 223 (281)
..|.++|+++.+ +++. .+. | +++.++.++....++.+|++-..|.+..
T Consensus 99 ~~al~aGkhVl~-EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~ 149 (330)
T 4ew6_A 99 YKALVAGKHVFL-EKPPGATLSEVADLEALANKQGASLFASWHSRYAPAVEA 149 (330)
T ss_dssp HHHHHTTCEEEE-CSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSTTHHH
T ss_pred HHHHHcCCcEEE-eCCCCCCHHHHHHHHHHHHhcCCeEEEEehhhccHHHHH
Confidence 455566666554 2111 122 2 3455555556667888999888877643
No 227
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=37.86 E-value=1.2e+02 Score=26.51 Aligned_cols=85 Identities=12% Similarity=0.111 Sum_probs=50.3
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~D 206 (281)
.++|+|++.|. |..+-..+.. .| ++| ++.|+ ...-.+.++++|+.+... ..+.++++++|
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~--~G---~~V--~~~dr----~~~~~~~~~~~g~~~~~~--------~~l~~~l~~aD 215 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAA--LG---AKV--KVGAR----ESDLLARIAEMGMEPFHI--------SKAAQELRDVD 215 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TT---CEE--EEEES----SHHHHHHHHHTTSEEEEG--------GGHHHHTTTCS
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CC---CEE--EEEEC----CHHHHHHHHHCCCeecCh--------hhHHHHhcCCC
Confidence 46899999887 4444333332 24 454 34454 111234455677643211 12445667999
Q ss_pred EEEEecccccCChhHHhhhcC--Ccee
Q 023530 207 FLVLARYMQPVPLQKEAYLGY--KLLE 231 (281)
Q Consensus 207 lIVLAgYMrILs~~fl~~~~~--riIN 231 (281)
+|+++=-..+++++.++..+. -+||
T Consensus 216 vVi~~~p~~~i~~~~l~~mk~~~~lin 242 (293)
T 3d4o_A 216 VCINTIPALVVTANVLAEMPSHTFVID 242 (293)
T ss_dssp EEEECCSSCCBCHHHHHHSCTTCEEEE
T ss_pred EEEECCChHHhCHHHHHhcCCCCEEEE
Confidence 999987777788877776653 4677
No 228
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=37.82 E-value=96 Score=28.28 Aligned_cols=71 Identities=17% Similarity=0.098 Sum_probs=40.5
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~D 206 (281)
.+||+|++.|. |..+-.-+.+ .| .+|. +.|+ +....+.|++.|+.. .. +.++.+.+..+++|
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~--~G---~~V~--~~dr----~~~~~~~a~~~G~~~--~~----~~~e~~~~a~~~aD 70 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHA--AN---HSVF--GYNR----SRSGAKSAVDEGFDV--SA----DLEATLQRAAAEDA 70 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH--TT---CCEE--EECS----CHHHHHHHHHTTCCE--ES----CHHHHHHHHHHTTC
T ss_pred CCEEEEEeecHHHHHHHHHHHH--CC---CEEE--EEeC----CHHHHHHHHHcCCee--eC----CHHHHHHhcccCCC
Confidence 46899999987 5544333332 34 3543 4554 234567788899832 11 22323333344789
Q ss_pred EEEEecccc
Q 023530 207 FLVLARYMQ 215 (281)
Q Consensus 207 lIVLAgYMr 215 (281)
+|++|=-..
T Consensus 71 lVilavP~~ 79 (341)
T 3ktd_A 71 LIVLAVPMT 79 (341)
T ss_dssp EEEECSCHH
T ss_pred EEEEeCCHH
Confidence 999985443
No 229
>1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B*
Probab=37.50 E-value=1.1e+02 Score=22.88 Aligned_cols=60 Identities=8% Similarity=-0.014 Sum_probs=41.4
Q ss_pred ccEEEEEEcCCCcchH----HHHHHHHHhCCCe-EeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHhhhh
Q 023530 41 THGIHVFHCPDEVGIV----AKLSECIASRGGN-ILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (281)
Q Consensus 41 ~~~iltV~G~DrpGIV----a~VS~~La~~giN-I~dl~q~~~~~~g~F~mrlev~~p~~~~~~~~L~~~L~~la~~l 113 (281)
+++.+.|.= |||+. .+|.+.|...|.+ +.++++ |.++ .++++.+ +.++-++..+++|++|
T Consensus 16 ~~~~V~V~l--KpgVlDPqG~aV~~aL~~LG~~~V~~VR~------GK~~-el~~~~~----~~~~a~~~v~~mc~kL 80 (94)
T 1vq3_A 16 FKFAIDVQY--RSNVRDPRGETIERVLREEKGLPVKKLRL------GKSI-HLEVEAE----NKEKAYEIVKKACEEL 80 (94)
T ss_dssp EEEEEEEEE--CTTSCCHHHHHHHHHHHHTTCCCEEEEEE------EEEE-EEEEECS----SHHHHHHHHHHHHHHT
T ss_pred EEEEEEEEE--CCCCcCcHHHHHHHHHHHcCCCccceeee------eeEE-EEEecCC----CHHHHHHHHHHHHHHH
Confidence 334444443 56654 6788999999996 888887 5544 4555532 4667788899999887
No 230
>2q8n_A Glucose-6-phosphate isomerase; TM1385, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: 2PE; 1.82A {Thermotoga maritima MSB8}
Probab=37.23 E-value=23 Score=34.19 Aligned_cols=55 Identities=5% Similarity=-0.062 Sum_probs=36.2
Q ss_pred eEEEEeeCChhHHHHHHH------hhhc--CCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 130 KVAVLASKQEHCLVDFLY------GWQE--GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 130 rIavl~Sg~GsnL~aLl~------~~~~--g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
-++|.+|++|+..+-+.. ...+ |+....+++|-+| ++.+..+.|+++||+++.++
T Consensus 142 TlvIviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~VAvT~~----~~s~L~~~A~~~Gi~~f~~~ 204 (460)
T 2q8n_A 142 TLFNVISKSGSTAEVMATYSIARGILEAYGLDPREHMLITTDP----EKGFLRKLVKEEGFRSLEVP 204 (460)
T ss_dssp EEEEEECSSSCCHHHHHHHHHHHHHHHHTTCCGGGTEEEEECS----SSSHHHHHHHHHTCEEEECC
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCccCeEEEEeCC----CCChHHHHHHHhCCceEeec
Confidence 388999999955554422 1111 3222456655444 36788999999999988887
No 231
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=36.67 E-value=51 Score=30.55 Aligned_cols=82 Identities=13% Similarity=0.136 Sum_probs=49.3
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh-CC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-NT 205 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~-~~ 205 (281)
-++|+|.+.|+ |..+-..+.. .| ++|+ ++|. ....+.++|+++|. ..++ .+ +++. ++
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~--~G---akVv--v~D~---~~~~l~~~a~~~ga--~~v~-----~~----~ll~~~~ 231 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNT--EG---AKLV--VTDV---NKAAVSAAVAEEGA--DAVA-----PN----AIYGVTC 231 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECS---CHHHHHHHHHHHCC--EECC-----GG----GTTTCCC
T ss_pred cCEEEEECchHHHHHHHHHHHH--CC---CEEE--EEcC---CHHHHHHHHHHcCC--EEEC-----hH----HHhccCC
Confidence 35798888887 4444433332 34 5654 7885 23345667887763 2322 11 2344 89
Q ss_pred CEEEEecccccCChhHHhhhcCCce
Q 023530 206 DFLVLARYMQPVPLQKEAYLGYKLL 230 (281)
Q Consensus 206 DlIVLAgYMrILs~~fl~~~~~riI 230 (281)
|+++.+.--.++..+.++..+.++|
T Consensus 232 DIvip~a~~~~I~~~~~~~lg~~iV 256 (364)
T 1leh_A 232 DIFAPCALGAVLNDFTIPQLKAKVI 256 (364)
T ss_dssp SEEEECSCSCCBSTTHHHHCCCSEE
T ss_pred cEeeccchHHHhCHHHHHhCCCcEE
Confidence 9999987666777776666665544
No 232
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=36.48 E-value=66 Score=30.49 Aligned_cols=52 Identities=19% Similarity=0.213 Sum_probs=33.2
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
..|||.|++-|+ |+.+-..|.. .| .+|+.|=.| + ..+...++++++++.+=+
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~--~~---~~v~vId~d-~----~~~~~~~~~~~~~~i~Gd 54 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVG--EN---NDITIVDKD-G----DRLRELQDKYDLRVVNGH 54 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCS--TT---EEEEEEESC-H----HHHHHHHHHSSCEEEESC
T ss_pred CcCEEEEECCCHHHHHHHHHHHH--CC---CCEEEEECC-H----HHHHHHHHhcCcEEEEEc
Confidence 357999999998 6666554432 23 577655443 2 234556678899888754
No 233
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=36.20 E-value=2e+02 Score=25.80 Aligned_cols=50 Identities=12% Similarity=0.086 Sum_probs=31.1
Q ss_pred eeEEEEeeCC-hh--HHHHHHHhhh-cCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 129 YKVAVLASKQ-EH--CLVDFLYGWQ-EGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 129 ~rIavl~Sg~-Gs--nL~aLl~~~~-~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
|||++++.|. |+ -+.+|....+ +| ++|.. ++. + ...+..++.|++++.++
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~G---h~V~v-~~~-~-----~~~~~v~~~g~~~~~l~ 54 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELG---ADARM-CLP-P-----DYVERCAEVGVPMVPVG 54 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTT---CCEEE-EEC-G-----GGHHHHHHTTCCEEECS
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCC---CeEEE-EeC-H-----HHHHHHHHcCCceeecC
Confidence 5888887776 42 2334555444 35 46664 443 2 24678889999999887
No 234
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=35.67 E-value=2.2e+02 Score=24.70 Aligned_cols=83 Identities=8% Similarity=0.108 Sum_probs=44.8
Q ss_pred CCeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCE-EEeC-CCC-CCh-H-----
Q 023530 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY-HYLC-AKE-NER-E----- 195 (281)
Q Consensus 127 ~~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~-~~i~-~k~-~~~-e----- 195 (281)
.|+||.+++...+ ..+..|++..++. -..++..+++.. ......+..+.+|+++ +.++ ... ... .
T Consensus 4 ~mmkIl~v~~~~~~~~~~~~l~~~L~~~-~g~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (376)
T 1v4v_A 4 GMKRVVLAFGTRPEATKMAPVYLALRGI-PGLKPLVLLTGQ---HREQLRQALSLFGIQEDRNLDVMQERQALPDLAARI 79 (376)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHHHTS-TTEEEEEEECSS---CHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHH
T ss_pred CceEEEEEEeccHHHHHHHHHHHHHHhC-CCCceEEEEcCC---cHHHHHHHHHHcCCCcccccccCCCCccHHHHHHHH
Confidence 4689988775432 2245566666542 025766666643 1122234456688875 3443 111 111 1
Q ss_pred -HHHHHHHh--CCCEEEEecc
Q 023530 196 -EELLELVQ--NTDFLVLARY 213 (281)
Q Consensus 196 -~~l~~~L~--~~DlIVLAgY 213 (281)
..+.+.++ ++|+|+.-++
T Consensus 80 ~~~l~~~l~~~~pDvv~~~~~ 100 (376)
T 1v4v_A 80 LPQAARALKEMGADYVLVHGD 100 (376)
T ss_dssp HHHHHHHHHHTTCSEEEEESS
T ss_pred HHHHHHHHHHcCCCEEEEeCC
Confidence 24556665 8999999764
No 235
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=34.93 E-value=43 Score=32.49 Aligned_cols=56 Identities=16% Similarity=0.113 Sum_probs=38.4
Q ss_pred eeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHH-HHHhCCCCEEEeC
Q 023530 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIR-FLERHGIPYHYLC 188 (281)
Q Consensus 129 ~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~-~A~~~gIP~~~i~ 188 (281)
.|+++..||+- +.+..|+... -| .++.+|..|+..+.. ..+.+ +|+++|||+++++
T Consensus 231 ~kvlvalSGGvDSsvla~ll~~~-~G---~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~ 292 (527)
T 3tqi_A 231 EQVIVGLSGGVDSAVTATLVHKA-IG---DQLVCVLVDTGLLRLNEVDEVLNVFQKHLGAKVICVD 292 (527)
T ss_dssp SCEEEECTTTHHHHHHHHHHHHH-HG---GGEEEEEECCSCSCTTHHHHHHHHHTTSSCCEEEEEC
T ss_pred CeEEEEEecCcCHHHHHHHHHHH-hC---CeEEEEEeccCCCChhHHHHHHHHHHHHcCCcEEEEe
Confidence 68999999983 5555555432 13 478888888754321 13344 8889999999987
No 236
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=34.75 E-value=63 Score=28.30 Aligned_cols=66 Identities=15% Similarity=0.071 Sum_probs=34.8
Q ss_pred CCCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhC
Q 023530 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 126 ~~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
..++||+|++.|. |+.+-..+.. .| .+|. +.|+ +....+.+.+.|+....-+. .+.+++
T Consensus 5 ~~~~~I~iIG~G~mG~~~a~~l~~--~G---~~V~--~~dr----~~~~~~~~~~~g~~~~~~~~---------~e~~~~ 64 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMGMGAARSCLR--AG---LSTW--GADL----NPQACANLLAEGACGAAASA---------REFAGV 64 (303)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECS----CHHHHHHHHHTTCSEEESSS---------TTTTTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH--CC---CeEE--EEEC----CHHHHHHHHHcCCccccCCH---------HHHHhc
Confidence 3467999999998 6555443332 34 3544 3464 22334555566765422111 122336
Q ss_pred CCEEEEe
Q 023530 205 TDFLVLA 211 (281)
Q Consensus 205 ~DlIVLA 211 (281)
+|+|+++
T Consensus 65 aDvvi~~ 71 (303)
T 3g0o_A 65 VDALVIL 71 (303)
T ss_dssp CSEEEEC
T ss_pred CCEEEEE
Confidence 7777776
No 237
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=34.62 E-value=54 Score=25.80 Aligned_cols=48 Identities=15% Similarity=0.189 Sum_probs=29.9
Q ss_pred eeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC--hhHHHHHHhCCCCEEEeCC
Q 023530 135 ASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERHGIPYHYLCA 189 (281)
Q Consensus 135 ~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~--a~~~~~A~~~gIP~~~i~~ 189 (281)
.+|.-..+.+| +.|. +..+.+-.|- +.++ ..+..+|++++||+++++.
T Consensus 26 ~~G~~~v~Kai----~~gk--a~LViiA~D~-~p~~~~~~i~~lc~~~~Ip~~~v~s 75 (126)
T 2xzm_U 26 SKGLHEVLRTI----EAKQ--ALFVCVAEDC-DQGNYVKLVKALCAKNEIKYVSVPK 75 (126)
T ss_dssp EESHHHHHHHH----HHTC--CSEEEEESSC-CSTTHHHHHHHHHHHTTCCEEEESC
T ss_pred eecHHHHHHHH----HcCC--ceEEEEeCCC-ChHHHHHHHHHHHHHhCCCEEEECC
Confidence 44444444443 4564 6677666664 2122 3567899999999999873
No 238
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=34.57 E-value=49 Score=30.42 Aligned_cols=71 Identities=15% Similarity=0.155 Sum_probs=35.5
Q ss_pred CCCCCeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH
Q 023530 124 DIDPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (281)
Q Consensus 124 ~~~~~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~ 201 (281)
..++.+||+|+++|. |.. ...|.+ . .+| ++.|+ ....+.+.|++. ....++. .+.+.+.++
T Consensus 12 ~~~~~~~v~IiGaG~iG~~ia~~L~~----~---~~V--~V~~R---~~~~a~~la~~~--~~~~~d~---~~~~~l~~l 74 (365)
T 2z2v_A 12 IEGRHMKVLILGAGNIGRAIAWDLKD----E---FDV--YIGDV---NNENLEKVKEFA--TPLKVDA---SNFDKLVEV 74 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTT----T---SEE--EEEES---CHHHHHHHTTTS--EEEECCT---TCHHHHHHH
T ss_pred ccCCCCeEEEEcCCHHHHHHHHHHHc----C---CeE--EEEEC---CHHHHHHHHhhC--CeEEEec---CCHHHHHHH
Confidence 357889999999987 332 233322 1 344 34555 223344444433 2233331 112356666
Q ss_pred HhCCCEEEEe
Q 023530 202 VQNTDFLVLA 211 (281)
Q Consensus 202 L~~~DlIVLA 211 (281)
++++|+||.+
T Consensus 75 l~~~DvVIn~ 84 (365)
T 2z2v_A 75 MKEFELVIGA 84 (365)
T ss_dssp HTTCSCEEEC
T ss_pred HhCCCEEEEC
Confidence 6788888876
No 239
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=34.06 E-value=1.3e+02 Score=26.22 Aligned_cols=86 Identities=15% Similarity=0.126 Sum_probs=49.6
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCC
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~ 205 (281)
+.++|+|++.|. |..+-..+.. .| ++|. +.|+ ...-.+.++++|+.+... ..+.++++++
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~--~G---~~V~--~~d~----~~~~~~~~~~~g~~~~~~--------~~l~~~l~~a 216 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAA--LG---ANVK--VGAR----SSAHLARITEMGLVPFHT--------DELKEHVKDI 216 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH--TT---CEEE--EEES----SHHHHHHHHHTTCEEEEG--------GGHHHHSTTC
T ss_pred CCCEEEEEcccHHHHHHHHHHHH--CC---CEEE--EEEC----CHHHHHHHHHCCCeEEch--------hhHHHHhhCC
Confidence 356899999887 4444333332 24 4543 3453 111223344567543221 1244566799
Q ss_pred CEEEEecccccCChhHHhhhcC--Ccee
Q 023530 206 DFLVLARYMQPVPLQKEAYLGY--KLLE 231 (281)
Q Consensus 206 DlIVLAgYMrILs~~fl~~~~~--riIN 231 (281)
|+|+++==..++++..++..+. -+||
T Consensus 217 DvVi~~~p~~~i~~~~~~~mk~g~~lin 244 (300)
T 2rir_A 217 DICINTIPSMILNQTVLSSMTPKTLILD 244 (300)
T ss_dssp SEEEECCSSCCBCHHHHTTSCTTCEEEE
T ss_pred CEEEECCChhhhCHHHHHhCCCCCEEEE
Confidence 9999987667788777776652 3567
No 240
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=34.00 E-value=24 Score=27.32 Aligned_cols=49 Identities=10% Similarity=0.019 Sum_probs=29.7
Q ss_pred EeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 134 l~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
+++|.-..+ ++++.|. +..+.+-+|-++.-...+..+|+.++||+++++
T Consensus 27 ~~~G~~~t~----kai~~gk--akLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~ 75 (112)
T 3iz5_f 27 YTLGYKTVL----KTLRSSL--GKLIILANNCPPLRKSEIETYAMLAKISVHHFH 75 (112)
T ss_dssp EEESHHHHH----HHHHTTC--CSEEEECSCCCHHHHHHHHHHHHHTTCCEECCC
T ss_pred eeECHHHHH----HHHHcCC--ceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeC
Confidence 345544444 4445574 567666565421111346778999999999984
No 241
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=33.95 E-value=47 Score=28.70 Aligned_cols=55 Identities=4% Similarity=0.005 Sum_probs=37.4
Q ss_pred eeEEEEeeCC--hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHHHHHhCCCCEEEeC
Q 023530 129 YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 129 ~rIavl~Sg~--GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~~A~~~gIP~~~i~ 188 (281)
.+|+|-.||+ .+.|-.++.... .+|.+|..|+.-..+ ..+.+.|+++|||++++.
T Consensus 46 ~~v~va~SGG~DS~vLL~ll~~~~-----~~v~vv~idtg~~~~et~~~~~~~~~~~gi~~~v~~ 105 (252)
T 2o8v_A 46 GEYVLSSSFGIQAAVSLHLVNQIR-----PDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYR 105 (252)
T ss_dssp SCEEEECCCSTTHHHHHHHHHHHS-----TTCEEEECCCSCBCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHhC-----CCCeEEEecCCCCCHHHHHHHHHHHHHhCCceEEEc
Confidence 3799999986 356666665532 246667777632111 357888999999999886
No 242
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=33.91 E-value=92 Score=30.60 Aligned_cols=50 Identities=12% Similarity=0.080 Sum_probs=27.1
Q ss_pred eeEEEEeeCC-h-hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCC
Q 023530 129 YKVAVLASKQ-E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (281)
Q Consensus 129 ~rIavl~Sg~-G-snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP 183 (281)
+||+|++-|. | +-..+|.++........+| +++++. +....+.|++.|+.
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~V--iVg~r~---~sks~e~A~e~G~~ 106 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVV--KIGLRK---GSKSFDEARAAGFT 106 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEE--EEEECT---TCSCHHHHHHTTCC
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEE--EEEeCC---chhhHHHHHHCCCE
Confidence 6899999998 5 3334444432211111243 334442 22346778888875
No 243
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=33.86 E-value=42 Score=29.77 Aligned_cols=66 Identities=11% Similarity=0.146 Sum_probs=34.3
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCe-eEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhC
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPV-EITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~-eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
.++||+|++.|. |..+-.-+.. .| . +|. +.|+. ++....+.+++.|+.+. . + ..+.+++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~--~G---~~~V~--~~dr~--~~~~~~~~~~~~g~~~~--~----~----~~e~~~~ 83 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQ--AG---AIDMA--AYDAA--SAESWRPRAEELGVSCK--A----S----VAEVAGE 83 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH--HS---CCEEE--EECSS--CHHHHHHHHHHTTCEEC--S----C----HHHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHH--CC---CCeEE--EEcCC--CCHHHHHHHHHCCCEEe--C----C----HHHHHhc
Confidence 467999999998 5544333322 35 3 443 45541 11234556677775321 1 1 1234446
Q ss_pred CCEEEEe
Q 023530 205 TDFLVLA 211 (281)
Q Consensus 205 ~DlIVLA 211 (281)
+|+|+++
T Consensus 84 aDvVi~~ 90 (312)
T 3qsg_A 84 CDVIFSL 90 (312)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 7877776
No 244
>3l8m_A Probable thiamine pyrophosphokinase; thiamin diphosphate biosynthetic process, ATP binding, structural genomics, PSI-2; 2.40A {Staphylococcus saprophyticus}
Probab=33.56 E-value=81 Score=26.77 Aligned_cols=55 Identities=5% Similarity=-0.010 Sum_probs=32.5
Q ss_pred eEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCC-ChHHHHHHHHh-CCCEEEEecc
Q 023530 157 EITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKEN-EREEELLELVQ-NTDFLVLARY 213 (281)
Q Consensus 157 eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~-~~e~~l~~~L~-~~DlIVLAgY 213 (281)
..-+++.+ .|.-....+++.++.+ +++.+| .|.. +.|.++..+++ +++-|++.|-
T Consensus 41 ~Pd~ivGD-~DSi~~~~~~~~~~~~-~i~~~p~eKD~TD~e~Al~~a~~~~~~~I~i~Ga 98 (212)
T 3l8m_A 41 TPQFAVGD-FDSISDSERNFIQQQI-EINPYNSEKDDTDLALGIDQAVKRGYRNIDVYGA 98 (212)
T ss_dssp CCSEEESC-CCCSCHHHHHHHHHHT-BCCCCC---CBCHHHHHHHHHHHTTCCEEEEESC
T ss_pred CccEEEeC-cccCCHHHHHHHhcCC-cEEEECCcCCCCHHHHHHHHHHHCCCCEEEEEcC
Confidence 34467787 5544556777777788 887776 4432 33556666666 6655555443
No 245
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=33.35 E-value=82 Score=27.06 Aligned_cols=62 Identities=16% Similarity=0.208 Sum_probs=32.4
Q ss_pred eeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCCCE
Q 023530 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (281)
Q Consensus 129 ~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~Dl 207 (281)
+||+|++.|. |..+-..+.. .| .+| ++.++ +..-.+...+.|+.. .. +. .+.++++|+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~--~g---~~V--~~~~~----~~~~~~~~~~~g~~~--~~----~~----~~~~~~~D~ 64 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK--AG---YSL--VVSDR----NPEAIADVIAAGAET--AS----TA----KAIAEQCDV 64 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH--TT---CEE--EEECS----CHHHHHHHHHTTCEE--CS----SH----HHHHHHCSE
T ss_pred ceEEEECchHHHHHHHHHHHh--CC---CEE--EEEeC----CHHHHHHHHHCCCee--cC----CH----HHHHhCCCE
Confidence 6999999998 5554433332 34 365 34454 112233444456532 11 11 133446888
Q ss_pred EEEe
Q 023530 208 LVLA 211 (281)
Q Consensus 208 IVLA 211 (281)
|+++
T Consensus 65 vi~~ 68 (299)
T 1vpd_A 65 IITM 68 (299)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8887
No 246
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=33.30 E-value=1.5e+02 Score=25.98 Aligned_cols=75 Identities=8% Similarity=0.077 Sum_probs=39.8
Q ss_pred CCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--C
Q 023530 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (281)
Q Consensus 127 ~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~--~ 204 (281)
+-.+|+|.+.|..- +.++..+...+ .++|.++-++ ++ -+++|++.|-...+ +.+..+..+++.++.. .
T Consensus 163 ~g~~VlV~GaG~~g-~~a~~~a~~~~--g~~Vi~~~~~-~~-----r~~~~~~~Ga~~~i-~~~~~~~~~~v~~~t~g~g 232 (348)
T 4eez_A 163 PGDWQVIFGAGGLG-NLAIQYAKNVF--GAKVIAVDIN-QD-----KLNLAKKIGADVTI-NSGDVNPVDEIKKITGGLG 232 (348)
T ss_dssp TTCEEEEECCSHHH-HHHHHHHHHTS--CCEEEEEESC-HH-----HHHHHHHTTCSEEE-EC-CCCHHHHHHHHTTSSC
T ss_pred CCCEEEEEcCCCcc-HHHHHHHHHhC--CCEEEEEECc-HH-----HhhhhhhcCCeEEE-eCCCCCHHHHhhhhcCCCC
Confidence 34578888776532 22222222222 2577766555 22 26789999976555 3222233445555544 4
Q ss_pred CCEEEEe
Q 023530 205 TDFLVLA 211 (281)
Q Consensus 205 ~DlIVLA 211 (281)
+|.++.+
T Consensus 233 ~d~~~~~ 239 (348)
T 4eez_A 233 VQSAIVC 239 (348)
T ss_dssp EEEEEEC
T ss_pred ceEEEEe
Confidence 6666654
No 247
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=33.21 E-value=37 Score=27.28 Aligned_cols=73 Identities=14% Similarity=0.144 Sum_probs=44.0
Q ss_pred CCeeEEEEeeCCh-hHHHHHHHhhhcCCC--CeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCC-ChHHHHHHHH
Q 023530 127 PKYKVAVLASKQE-HCLVDFLYGWQEGKL--PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKEN-EREEELLELV 202 (281)
Q Consensus 127 ~~~rIavl~Sg~G-snL~aLl~~~~~g~l--~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~-~~e~~l~~~L 202 (281)
.+++||+-+.-+. .-+.++..+..+ + .+++.+--+. +.-+.+..|||+..+. |.. .-+..+.+.+
T Consensus 2 ~~~~ialsv~D~dK~~~v~~a~~~~~--ll~Gf~l~AT~gT--------a~~L~e~~Gl~v~~v~-k~~~eG~p~I~d~I 70 (134)
T 2xw6_A 2 HMRALALIAHDAKKEEMVAFCQRHRE--VLARFPLVATGTT--------GRRIEEATGLTVEKLL-SGPLGGDQQMGARV 70 (134)
T ss_dssp CSCEEEEEECGGGHHHHHHHHHHTHH--HHTTSCEEECHHH--------HHHHHHHHCCCCEECS-CGGGTHHHHHHHHH
T ss_pred CccEEEEEEecccHHHHHHHHHHHHH--HhCCCEEEEccHH--------HHHHHHhhCceEEEEE-ecCCCCcchHHHHH
Confidence 5678998888765 444445444322 2 2455432221 2333344899999986 222 2345688888
Q ss_pred h--CCCEEEE
Q 023530 203 Q--NTDFLVL 210 (281)
Q Consensus 203 ~--~~DlIVL 210 (281)
+ ++|+||-
T Consensus 71 ~~geIdlVIn 80 (134)
T 2xw6_A 71 AEGRILAVIF 80 (134)
T ss_dssp HTTCEEEEEE
T ss_pred HCCCccEEEE
Confidence 8 7999985
No 248
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=33.19 E-value=93 Score=25.00 Aligned_cols=80 Identities=16% Similarity=0.205 Sum_probs=45.8
Q ss_pred CCeeEEEEeeCCh---hHHHHHHHhhhc-CCCC---eeEEEEEeC--CC-CCCChhHHHHHHhCCCCEEEeC-CCCCChH
Q 023530 127 PKYKVAVLASKQE---HCLVDFLYGWQE-GKLP---VEITCVISN--HD-RGPNSHVIRFLERHGIPYHYLC-AKENERE 195 (281)
Q Consensus 127 ~~~rIavl~Sg~G---snL~aLl~~~~~-g~l~---~eI~~Visn--~p-d~~~a~~~~~A~~~gIP~~~i~-~k~~~~e 195 (281)
.++||.|..+|+. .-.++|+.+... ..+. .+|.---+. ++ ..++..+.+.++++||+.- .. +....
T Consensus 6 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s-~~ar~l~~-- 82 (161)
T 1d1q_A 6 PKISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKIN-HKGKQIKT-- 82 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCC-CCBCBCCG--
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCC-ceEeECCH--
Confidence 4578999999995 445556655332 1122 344322222 21 1156678899999999976 33 22211
Q ss_pred HHHHHHHhCCCEEEEecc
Q 023530 196 EELLELVQNTDFLVLARY 213 (281)
Q Consensus 196 ~~l~~~L~~~DlIVLAgY 213 (281)
+.+++.|+|+...-
T Consensus 83 ----~~~~~~DlIl~M~~ 96 (161)
T 1d1q_A 83 ----KHFDEYDYIIGMDE 96 (161)
T ss_dssp ----GGGGTCSEEEESSH
T ss_pred ----HHHhhCCEEEEeCH
Confidence 12337899998644
No 249
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=33.17 E-value=1.2e+02 Score=26.63 Aligned_cols=50 Identities=16% Similarity=0.219 Sum_probs=30.6
Q ss_pred CeeEEEEeeCC-hhH--HHHHHHhhh-cCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEe
Q 023530 128 KYKVAVLASKQ-EHC--LVDFLYGWQ-EGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187 (281)
Q Consensus 128 ~~rIavl~Sg~-Gsn--L~aLl~~~~-~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i 187 (281)
+|||++++.+. ||. +..|..+.+ .| ++|..+ +. + ...+..+..|++++.+
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~G---heV~v~-~~-~-----~~~~~~~~~g~~~~~~ 54 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASG---HEVLIA-AP-P-----ELQATAHGAGLTTAGI 54 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTT---CEEEEE-EC-H-----HHHHHHHHBTCEEEEC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCC---CEEEEe-cC-h-----hhHHHHHhCCCceeee
Confidence 36898887555 432 234555544 34 577644 43 1 2456778899999887
No 250
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=32.99 E-value=46 Score=28.60 Aligned_cols=19 Identities=11% Similarity=-0.013 Sum_probs=13.0
Q ss_pred CeeEEEEeeCC-hhHHHHHH
Q 023530 128 KYKVAVLASKQ-EHCLVDFL 146 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl 146 (281)
|+||+|++.|. |+.+-..+
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l 22 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINL 22 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHH
Confidence 46999999998 65554433
No 251
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=32.88 E-value=33 Score=25.75 Aligned_cols=49 Identities=8% Similarity=0.173 Sum_probs=29.1
Q ss_pred EeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 134 l~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
+++|.-.. .+++++|. +..+.+-+|-++.--.....+|+.++||++.+.
T Consensus 20 ~v~G~~~v----~kai~~gk--a~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~ 68 (101)
T 3v7q_A 20 VVSGEDLV----IKEIRNAR--AKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVE 68 (101)
T ss_dssp EEESHHHH----HHHHHTTC--CSEEEEETTSCHHHHHHHHHHHHHTTCCEEEES
T ss_pred cccchhhh----HHHHhcCc--eeEEEEeccccccchhhhcccccccCCCeeeec
Confidence 44554444 44445574 566656555421111245667999999999985
No 252
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=32.57 E-value=51 Score=26.22 Aligned_cols=52 Identities=13% Similarity=0.132 Sum_probs=31.4
Q ss_pred HHHhhhcCCCCeeEEEEEeCCCCC-CChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 145 FLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 145 Ll~~~~~g~l~~eI~~Visn~pd~-~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
.+.+++.|. +..+.+-.|-++. --..+..+|+++|||+++++.+ .+|=+++-
T Consensus 40 v~kai~~gk--akLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk-----~eLG~a~G 92 (134)
T 2ale_A 40 ATKTLNRGI--SEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSR-----VALGRACG 92 (134)
T ss_dssp HHHHHHHTC--EEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCH-----HHHHHHTT
T ss_pred HHHHHHhCC--CeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCH-----HHHHHHhC
Confidence 344445564 6777666664321 0235678999999999888632 24555554
No 253
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=32.56 E-value=39 Score=30.10 Aligned_cols=77 Identities=6% Similarity=-0.002 Sum_probs=45.9
Q ss_pred hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCC--CChH-HHHHHHHhCCCEEEEeccccc
Q 023530 140 HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE--NERE-EELLELVQNTDFLVLARYMQP 216 (281)
Q Consensus 140 snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~--~~~e-~~l~~~L~~~DlIVLAgYMrI 216 (281)
+.+++|++. .+ .+++.|.| |+.-.......|.++|.++++ +++. +..| +++.++.++..++++.||++-
T Consensus 76 ~d~~ell~~---~~--iDaV~I~t--P~~~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R 147 (350)
T 4had_A 76 GSYEEMLAS---DV--IDAVYIPL--PTSQHIEWSIKAADAGKHVVC-EKPLALKAGDIDAVIAARDRNKVVVTEAYMIT 147 (350)
T ss_dssp SSHHHHHHC---SS--CSEEEECS--CGGGHHHHHHHHHHTTCEEEE-CSCCCSSGGGGHHHHHHHHHHTCCEEECCGGG
T ss_pred CCHHHHhcC---CC--CCEEEEeC--CCchhHHHHHHHHhcCCEEEE-eCCcccchhhHHHHHHHHHHcCCceeEeeeee
Confidence 346777763 32 35554444 221234666778888887776 3221 1122 456666666677888889888
Q ss_pred CChhHHhh
Q 023530 217 VPLQKEAY 224 (281)
Q Consensus 217 Ls~~fl~~ 224 (281)
..|.+...
T Consensus 148 ~~p~~~~~ 155 (350)
T 4had_A 148 YSPVWQKV 155 (350)
T ss_dssp GSHHHHHH
T ss_pred cCHHHHHh
Confidence 88877543
No 254
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=32.50 E-value=72 Score=29.91 Aligned_cols=55 Identities=15% Similarity=0.090 Sum_probs=36.4
Q ss_pred eEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC-hhHHHHHHhCCC-CEEEeC
Q 023530 130 KVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN-SHVIRFLERHGI-PYHYLC 188 (281)
Q Consensus 130 rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~-a~~~~~A~~~gI-P~~~i~ 188 (281)
||++..||+- +.+-.++... .| .++.++..|+....+ ..+.+.|++.|+ |+++++
T Consensus 2 kVvva~SGG~DSsvll~ll~~~-~g---~~V~av~vd~g~~~e~e~a~~~A~~lGi~~~~vvd 60 (400)
T 1kor_A 2 KIVLAYSGGLDTSIILKWLKET-YR---AEVIAFTADIGQGEEVEEAREKALRTGASKAIALD 60 (400)
T ss_dssp EEEEECCSSHHHHHHHHHHHHH-HT---CEEEEEEEESSCSSCHHHHHHHHHHHTCSEEEEEE
T ss_pred cEEEEEeChHHHHHHHHHHHHh-hC---CcEEEEEEeCCCHHHHHHHHHHHHHhCCCeEEEEe
Confidence 7999999973 4444444421 14 478788777632112 467889999999 788765
No 255
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=32.30 E-value=98 Score=28.24 Aligned_cols=86 Identities=13% Similarity=0.111 Sum_probs=48.1
Q ss_pred CCeeEEEEeeCC-h-hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhC----CCCEEEeCCCCCChHHHHHH
Q 023530 127 PKYKVAVLASKQ-E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH----GIPYHYLCAKENEREEELLE 200 (281)
Q Consensus 127 ~~~rIavl~Sg~-G-snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~----gIP~~~i~~k~~~~e~~l~~ 200 (281)
..++|+|+++|. + ..+.+++.. .+ .+-+ .+.|+ ....+.++++++ |+++...+ + +.+
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~--~~---~~~V-~V~~r---~~~~a~~la~~~~~~~g~~~~~~~----~----~~e 190 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKH--LG---IEEI-VAYDT---DPLATAKLIANLKEYSGLTIRRAS----S----VAE 190 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHH--SC---CCEE-EEECS---SHHHHHHHHHHHTTCTTCEEEECS----S----HHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHh--CC---CcEE-EEEcC---CHHHHHHHHHHHHhccCceEEEeC----C----HHH
Confidence 346899999998 3 334455442 12 2323 34565 234556667665 66655432 1 225
Q ss_pred HHhCCCEEEEecccc----cCChhHHhhhcCCcee
Q 023530 201 LVQNTDFLVLARYMQ----PVPLQKEAYLGYKLLE 231 (281)
Q Consensus 201 ~L~~~DlIVLAgYMr----ILs~~fl~~~~~riIN 231 (281)
.++++|+||+|=--. ++..+.++ ++..||
T Consensus 191 av~~aDiVi~aTps~~~~pvl~~~~l~--~G~~V~ 223 (350)
T 1x7d_A 191 AVKGVDIITTVTADKAYATIITPDMLE--PGMHLN 223 (350)
T ss_dssp HHTTCSEEEECCCCSSEEEEECGGGCC--TTCEEE
T ss_pred HHhcCCEEEEeccCCCCCceecHHHcC--CCCEEE
Confidence 556899999975432 34333332 466777
No 256
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=32.20 E-value=1.8e+02 Score=22.59 Aligned_cols=89 Identities=11% Similarity=0.047 Sum_probs=48.4
Q ss_pred CCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEE--Ee-CCCCC----------------CC-----hhHHHHHHhCC
Q 023530 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCV--IS-NHDRG----------------PN-----SHVIRFLERHG 181 (281)
Q Consensus 126 ~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~V--is-n~pd~----------------~~-----a~~~~~A~~~g 181 (281)
...+||.|-+.++.....++-.+.+--...+++.++ -. +.+.. .. ....+.+++.|
T Consensus 15 ~~~~~ILv~vD~s~~s~~al~~A~~lA~~~a~l~ll~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g 94 (163)
T 1tq8_A 15 SAYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAG 94 (163)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHTTTSEEEEEEECCC--------------------CCTHHHHHHHHHHHHHTTT
T ss_pred ccCCEEEEEcCCCHHHHHHHHHHHHHhCCCCEEEEEEeeeccCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 345689998888876555553332211135677666 22 11110 00 12234556778
Q ss_pred CC-EEEeCCCCCChHHHHHHHHh--CCCEEEEecccc
Q 023530 182 IP-YHYLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (281)
Q Consensus 182 IP-~~~i~~k~~~~e~~l~~~L~--~~DlIVLAgYMr 215 (281)
++ +...-.. .+..++|.+..+ ++|+||+....+
T Consensus 95 v~~v~~~v~~-G~~~~~I~~~a~~~~~DLIV~G~~g~ 130 (163)
T 1tq8_A 95 AKNVEERPIV-GAPVDALVNLADEEKADLLVVGNVGL 130 (163)
T ss_dssp CCEEEEEEEC-SSHHHHHHHHHHHTTCSEEEEECCCC
T ss_pred CCeEEEEEec-CCHHHHHHHHHHhcCCCEEEECCCCC
Confidence 88 5443211 234567888776 899999986644
No 257
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=32.17 E-value=1.6e+02 Score=27.53 Aligned_cols=149 Identities=9% Similarity=0.012 Sum_probs=74.8
Q ss_pred HHHHHHHHhCCCeEeEeeeeccCC-CCeEEEEEEEEeCCCCCCHHHHHHH--HHHHhhhhcccceeeeecC--CCCCeeE
Q 023530 57 AKLSECIASRGGNILAADVFVPEK-KNVFYSRSEFIFDPIKWPREQMDED--FFKLSKMFNAMRSVVRVPD--IDPKYKV 131 (281)
Q Consensus 57 a~VS~~La~~giNI~dl~q~~~~~-~g~F~mrlev~~p~~~~~~~~L~~~--L~~la~~l~l~~~~~~~~~--~~~~~rI 131 (281)
.+.++.|.++|+..++++.-.+.. .+.+ |. -.+..++.-. ...-+..++--. ..-+.- .-+..||
T Consensus 118 ~~l~~~l~~~~it~ia~E~i~~~~~~~~l--------~~-l~~~s~iAGy~Av~~aa~~l~~~~-~~l~~~~~~v~~~kV 187 (381)
T 3p2y_A 118 PELASRLRIADVTAFAMESIPRISRAQTM--------DA-LSSQANVAGYKAVLLGASLSTRFV-PMLTTAAGTVKPASA 187 (381)
T ss_dssp HHHHHHHHHTTCEEEEGGGCCSSGGGGGG--------CH-HHHHHHHHHHHHHHHHHHHCSSCS-SCEECSSCEECCCEE
T ss_pred HHHHHHHHHCCCeEEEeeccccccccccc--------ee-ecchhHHHHHHHHHHHHHHhhhhh-hhhhcccCCcCCCEE
Confidence 678889999999998888743211 1111 10 0012233321 122222221100 000111 1145799
Q ss_pred EEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CC-----CCC---------hH
Q 023530 132 AVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AK-----ENE---------RE 195 (281)
Q Consensus 132 avl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k-----~~~---------~e 195 (281)
+|++.|. |.++-.++.+ .| ++|. +.|+ ...-++.+++.|..+..++ .. ..+ ..
T Consensus 188 ~ViG~G~iG~~aa~~a~~--lG---a~V~--v~D~----~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~ 256 (381)
T 3p2y_A 188 LVLGVGVAGLQALATAKR--LG---AKTT--GYDV----RPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQ 256 (381)
T ss_dssp EEESCSHHHHHHHHHHHH--HT---CEEE--EECS----SGGGHHHHHHTTCEECCCC-------------CHHHHHHHH
T ss_pred EEECchHHHHHHHHHHHH--CC---CEEE--EEeC----CHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhH
Confidence 9999987 5555555554 34 4543 3443 1123567777886544321 00 000 11
Q ss_pred HHHHHHHhCCCEEEEecc------cccCChhHHhhhc
Q 023530 196 EELLELVQNTDFLVLARY------MQPVPLQKEAYLG 226 (281)
Q Consensus 196 ~~l~~~L~~~DlIVLAgY------MrILs~~fl~~~~ 226 (281)
+.+.+.++++|+|+.+=. -.+++++.++..+
T Consensus 257 ~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~Mk 293 (381)
T 3p2y_A 257 QALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQ 293 (381)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSC
T ss_pred HHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCC
Confidence 245566679999998621 2467888887765
No 258
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=32.11 E-value=92 Score=31.48 Aligned_cols=57 Identities=19% Similarity=0.100 Sum_probs=39.8
Q ss_pred eeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCC---ChhHHHHHHhCCCCEEEeC
Q 023530 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP---NSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 129 ~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~---~a~~~~~A~~~gIP~~~i~ 188 (281)
.|+++..||+- +.+.+|+.+. -| +.++.+|..|+..++ ...+.+.|+++|||+++++
T Consensus 241 ~~vvv~lSGGvDSsVla~Ll~~a-lG--~~~V~aV~vd~g~~~~~e~e~a~~~a~~lGI~~~vvd 302 (697)
T 2vxo_A 241 SKVLVLLSGGVDSTVCTALLNRA-LN--QEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVIN 302 (697)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHH-SC--GGGEEEEEEECSCCCSSTTHHHHHHHHHTTCCEEEEE
T ss_pred cceEEEccCchHHHHHHHHHHHh-cC--CceEEEEEeccccCCcchHHHHHHHHHHhCCcEEEec
Confidence 68999999983 4444455431 13 147888888874321 2468889999999999987
No 259
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=31.99 E-value=1.9e+02 Score=25.83 Aligned_cols=52 Identities=10% Similarity=0.048 Sum_probs=31.5
Q ss_pred CeeEEEEeeCC-hhH--HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 128 KYKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 128 ~~rIavl~Sg~-Gsn--L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
++||+++..+. ||. +.+|.++..+- .++|..+.+.. ..+..++.|++++.++
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~--G~~V~~~~~~~-------~~~~~~~~g~~~~~~~ 61 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVAR--GHRVTYAIPPV-------FADKVAATGPRPVLYH 61 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEECGG-------GHHHHHTTSCEEEECC
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHC--CCeEEEEeCHH-------HHHHHHhCCCEEEEcC
Confidence 46899876655 432 45566655432 25777554432 2456677899988776
No 260
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=31.72 E-value=2.2e+02 Score=24.31 Aligned_cols=76 Identities=14% Similarity=0.180 Sum_probs=40.7
Q ss_pred CeeEEEEee-CC-h-hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhC
Q 023530 128 KYKVAVLAS-KQ-E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 128 ~~rIavl~S-g~-G-snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
+++|.|.+. |. | +..+.|++ .| .+|.++.-+ ++ +.+..++.-+..|+.++..+- .+.+.+.+++++
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~---~g---~~V~~l~R~-~~-~~~~~~~~l~~~~v~~v~~Dl---~d~~~l~~a~~~ 79 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLK---LG---HPTYVFTRP-NS-SKTTLLDEFQSLGAIIVKGEL---DEHEKLVELMKK 79 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHH---TT---CCEEEEECT-TC-SCHHHHHHHHHTTCEEEECCT---TCHHHHHHHHTT
T ss_pred CCeEEEECCCchHHHHHHHHHHH---CC---CcEEEEECC-CC-chhhHHHHhhcCCCEEEEecC---CCHHHHHHHHcC
Confidence 347777763 43 4 44455555 35 466654433 22 122222212356787777651 123467788888
Q ss_pred CCEEEE-eccc
Q 023530 205 TDFLVL-ARYM 214 (281)
Q Consensus 205 ~DlIVL-AgYM 214 (281)
+|.||. |++.
T Consensus 80 ~d~vi~~a~~~ 90 (318)
T 2r6j_A 80 VDVVISALAFP 90 (318)
T ss_dssp CSEEEECCCGG
T ss_pred CCEEEECCchh
Confidence 998876 4544
No 261
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=31.59 E-value=72 Score=28.64 Aligned_cols=78 Identities=13% Similarity=0.030 Sum_probs=48.4
Q ss_pred CeeEEEEeeCCh-hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhC-------CCCEEEeCCCCCChHHHHH
Q 023530 128 KYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH-------GIPYHYLCAKENEREEELL 199 (281)
Q Consensus 128 ~~rIavl~Sg~G-snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~-------gIP~~~i~~k~~~~e~~l~ 199 (281)
..|++++.|| - |...+ ....++| .+|.++-.|-.++.-..+.+.|+.. +||+++++. ..+.+
T Consensus 179 ~~kvlvllSG-vDS~vaa-~ll~~~G---~~v~~v~~~~~~~~~~~a~~~a~~l~~~~~~~~i~~~vv~~----~~~~~- 248 (307)
T 1vbk_A 179 EGRMIGILHD-ELSALAI-FLMMKRG---VEVIPVYIGKDDKNLEKVRSLWNLLKRYSYGSKGFLVVAES----FDRVL- 248 (307)
T ss_dssp TCEEEEECSS-HHHHHHH-HHHHHBT---CEEEEEEESCSSHHHHHHHHHHHHHHTTCTTSCCCCEEESS----HHHHH-
T ss_pred CCcEEEEEeC-CcHHHHH-HHHHhCC---CeEEEEEEEECHHHHHHHHHHHHHHhhhccCCCCcEEEeCC----CHHHH-
Confidence 4699999999 6 43322 2223456 5898888884211012466777666 999999861 22222
Q ss_pred HHHh--CCCEEEEecccc
Q 023530 200 ELVQ--NTDFLVLARYMQ 215 (281)
Q Consensus 200 ~~L~--~~DlIVLAgYMr 215 (281)
+..+ ++|.|+..=|..
T Consensus 249 ~~A~~~ga~~I~tG~~~~ 266 (307)
T 1vbk_A 249 KLIRDFGVKGVIKGLRPN 266 (307)
T ss_dssp HHHHHHTCCEEECCCCGG
T ss_pred HHHHHcCCCEEEECcccc
Confidence 3333 899999977753
No 262
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=31.32 E-value=1.8e+02 Score=24.88 Aligned_cols=42 Identities=14% Similarity=0.212 Sum_probs=27.5
Q ss_pred HHHHHHhCCCCE--EEeCCCCCChHHHHHHHHh--CCCEEEEeccccc
Q 023530 173 VIRFLERHGIPY--HYLCAKENEREEELLELVQ--NTDFLVLARYMQP 216 (281)
Q Consensus 173 ~~~~A~~~gIP~--~~i~~k~~~~e~~l~~~L~--~~DlIVLAgYMrI 216 (281)
..++++++|++. .++.. ....+.|.+..+ ++|+||+..+.+=
T Consensus 233 l~~~~~~~~~~~~~~~v~~--g~~~~~I~~~a~~~~~dLiV~G~~g~~ 278 (319)
T 3olq_A 233 MKELRQKFSIPEEKTHVKE--GLPEQVIPQVCEELNAGIVVLGILGRT 278 (319)
T ss_dssp HHHHHHHTTCCGGGEEEEE--SCHHHHHHHHHHHTTEEEEEEECCSCC
T ss_pred HHHHHHHhCCCcccEEEec--CCcHHHHHHHHHHhCCCEEEEeccCcc
Confidence 345668888862 22221 234567888777 8999999988653
No 263
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=31.29 E-value=85 Score=24.06 Aligned_cols=52 Identities=19% Similarity=0.300 Sum_probs=31.8
Q ss_pred HHHhhhcCCCCeeEEEEEeCCCCCC-ChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 145 FLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 145 Ll~~~~~g~l~~eI~~Visn~pd~~-~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
...+++.|. +..+.+-+|-++.. -.....+|+++|||+.++.++ +++=.++-
T Consensus 35 v~kal~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk-----~eLG~a~G 87 (119)
T 1rlg_A 35 TTKAVERGL--AKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSK-----NDLGRAVG 87 (119)
T ss_dssp HHHHHTTTC--CSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEESCH-----HHHHHHTT
T ss_pred HHHHHHcCC--CcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEeCCH-----HHHHHHhC
Confidence 344455574 56776666643211 246778999999998887632 24555554
No 264
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=31.20 E-value=47 Score=29.60 Aligned_cols=40 Identities=15% Similarity=-0.045 Sum_probs=27.9
Q ss_pred eeecCCCCCeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEe
Q 023530 120 VRVPDIDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVIS 163 (281)
Q Consensus 120 ~~~~~~~~~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Vis 163 (281)
..+...+..++|+||=||=| |.++.|.+... ..++..+--
T Consensus 16 ~~~~~~~~~~~IgvfDSGvGGLtv~~~i~~~lP----~e~~iy~~D 57 (274)
T 3uhf_A 16 ENLYFQSNAMKIGVFDSGVGGLSVLKSLYEARL----FDEIIYYGD 57 (274)
T ss_dssp -CCCCCCSCCEEEEEESSSTTHHHHHHHHHTTC----CSEEEEEEC
T ss_pred ceeeccCCCCeEEEEECCCChHHHHHHHHHHCC----CCCEEEEec
Confidence 34556667789999999997 88888877532 146665544
No 265
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=31.16 E-value=63 Score=28.71 Aligned_cols=77 Identities=8% Similarity=-0.015 Sum_probs=48.4
Q ss_pred hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCC-C-hH-HHHHHHHhCCCEEEEeccccc
Q 023530 140 HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKEN-E-RE-EELLELVQNTDFLVLARYMQP 216 (281)
Q Consensus 140 snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~-~-~e-~~l~~~L~~~DlIVLAgYMrI 216 (281)
+.+++|++. .+ .+++.|.| |+.-.......|.++|.++++ +++.. . .| +++.++.++..++++.||++-
T Consensus 84 ~d~~ell~~---~~--iDaV~Iat--P~~~H~~~a~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R 155 (393)
T 4fb5_A 84 ADWRALIAD---PE--VDVVSVTT--PNQFHAEMAIAALEAGKHVWC-EKPMAPAYADAERMLATAERSGKVAALGYNYI 155 (393)
T ss_dssp SCHHHHHHC---TT--CCEEEECS--CGGGHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHSSSCEEECCGGG
T ss_pred CCHHHHhcC---CC--CcEEEECC--ChHHHHHHHHHHHhcCCeEEE-ccCCcccHHHHHHhhhhHHhcCCccccccccc
Confidence 457788773 43 45554443 322245667788889988777 32221 2 22 356666667778889999999
Q ss_pred CChhHHhh
Q 023530 217 VPLQKEAY 224 (281)
Q Consensus 217 Ls~~fl~~ 224 (281)
..|.+...
T Consensus 156 ~~p~~~~~ 163 (393)
T 4fb5_A 156 QNPVMRHI 163 (393)
T ss_dssp GCHHHHHH
T ss_pred cChHHHHH
Confidence 98887644
No 266
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=31.11 E-value=93 Score=25.44 Aligned_cols=81 Identities=15% Similarity=0.128 Sum_probs=42.5
Q ss_pred CeeEEEEeeCCh---hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhC
Q 023530 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 128 ~~rIavl~Sg~G---snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
++||.|..+|+- .-.++|+.... +++.+.=+++-......++..+.+.++++||+......+.-. + +.+++
T Consensus 26 m~~VLFVCtgNicRSpmAEal~r~~~-~~~~v~SAGt~~~~g~~~~p~a~~vl~e~Gid~s~~~sr~l~-~----~~~~~ 99 (168)
T 2wja_A 26 FDSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGALVDHAADESAIRVAEKNGLCLKGHRGTKFT-S----ALARQ 99 (168)
T ss_dssp CSEEEEEESSSSSHHHHHHHHHHHHS-TTSEEEEEETTCCTTCCCCHHHHHC---CCCCCTTCCCCBCC-H----HHHTT
T ss_pred cCEEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecCCCCCCCCCHHHHHHHHHcCCCcccCccCCCC-h----hHhcc
Confidence 458999999995 45566666543 333222233322111114567888999999986321111111 1 12348
Q ss_pred CCEEEEeccc
Q 023530 205 TDFLVLARYM 214 (281)
Q Consensus 205 ~DlIVLAgYM 214 (281)
.|+|+...--
T Consensus 100 ~DlIitM~~~ 109 (168)
T 2wja_A 100 YDLLLVMEYS 109 (168)
T ss_dssp CSEEEESSHH
T ss_pred CCEEEEcCHH
Confidence 9999986543
No 267
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=31.06 E-value=1e+02 Score=24.94 Aligned_cols=80 Identities=8% Similarity=0.113 Sum_probs=43.4
Q ss_pred CCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCCChH---HHHHH
Q 023530 125 IDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENERE---EELLE 200 (281)
Q Consensus 125 ~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~~~e---~~l~~ 200 (281)
..+++|++|+..|. ++.+..+. .|++ .|. ......++.+++|+.+.... -++ +.+ +++.+
T Consensus 12 ~~~~~~v~iitvsd-~~~~~~~~---~g~i--------~D~---ng~~L~~~L~~~G~~v~~~~iV~D-d~~~i~~al~~ 75 (178)
T 3iwt_A 12 APKSLNFYVITIST-SRYEKLLK---KEPI--------VDE---SGDIIKQLLIENGHKIIGYSLVPD-DKIKILKAFTD 75 (178)
T ss_dssp -CCCCEEEEEEECH-HHHHHHHT---TCCC--------CCH---HHHHHHHHHHHTTCEEEEEEEECS-CHHHHHHHHHH
T ss_pred CCCCCEEEEEEEcC-CCcccccc---CCCC--------Ccc---hHHHHHHHHHHCCCEEEEEEEeCC-CHHHHHHHHHH
Confidence 44678999998774 33333333 2431 121 11245677889998876544 121 222 23333
Q ss_pred HHh--CCCEEEEecccccCChh
Q 023530 201 LVQ--NTDFLVLARYMQPVPLQ 220 (281)
Q Consensus 201 ~L~--~~DlIVLAgYMrILs~~ 220 (281)
.+. ++|+|+..|=.-.=..+
T Consensus 76 ~~a~~~~DlVittGG~g~~~~D 97 (178)
T 3iwt_A 76 ALSIDEVDVIISTGGTGYSPTD 97 (178)
T ss_dssp HHTCTTCCEEEEESCCSSSTTC
T ss_pred HHhcCCCCEEEecCCcccCCCC
Confidence 333 68999999855444333
No 268
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=31.02 E-value=55 Score=28.33 Aligned_cols=63 Identities=14% Similarity=0.081 Sum_probs=33.0
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~D 206 (281)
|+||+|++.|. |+.+-..+.. .| .+|. +.|+ ....+ +.+.+.|+. ..+ + ..+.++++|
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~--~G---~~V~--~~dr---~~~~~-~~~~~~g~~--~~~----~----~~~~~~~ad 59 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVR--AG---FDVT--VWNR---NPAKC-APLVALGAR--QAS----S----PAEVCAACD 59 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHH--HT---CCEE--EECS---SGGGG-HHHHHHTCE--ECS----C----HHHHHHHCS
T ss_pred CCeEEEEccCHHHHHHHHHHHH--CC---CeEE--EEcC---CHHHH-HHHHHCCCe--ecC----C----HHHHHHcCC
Confidence 46899999998 6555443332 35 3554 3454 11222 333344542 111 1 224445788
Q ss_pred EEEEe
Q 023530 207 FLVLA 211 (281)
Q Consensus 207 lIVLA 211 (281)
+|+++
T Consensus 60 vvi~~ 64 (287)
T 3pdu_A 60 ITIAM 64 (287)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 88887
No 269
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=31.00 E-value=1.4e+02 Score=27.06 Aligned_cols=69 Identities=9% Similarity=0.159 Sum_probs=35.0
Q ss_pred EEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHH---HhCCCCEEEeCCCCCChHHHHHHHHhCCC
Q 023530 131 VAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL---ERHGIPYHYLCAKENEREEELLELVQNTD 206 (281)
Q Consensus 131 Iavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A---~~~gIP~~~i~~k~~~~e~~l~~~L~~~D 206 (281)
-.||.-++ ++.+.-|..+.+.|. ..+| +++ +.+|...+...| .+.|||+..+... .+..+++++|
T Consensus 123 ~~ILTh~~S~tv~~~l~~A~~~gk-~~~V--~v~--EsrP~~qG~~la~~L~~~gI~vtli~Ds------a~~~~m~~vd 191 (315)
T 3ecs_A 123 ATILTHAYSRVVLRVLEAAVAAKK-RFSV--YVT--ESQPDLSGKKMAKALCHLNVPVTVVLDA------AVGYIMEKAD 191 (315)
T ss_dssp EEEEECSCCHHHHHHHHHHHTTTC-CEEE--EEE--CCTTTTHHHHHHHHHHTTTCCEEEECGG------GHHHHGGGCS
T ss_pred CEEEEcCCcHHHHHHHHHHHHcCC-eEEE--EEe--cCCCcchHHHHHHHHHHcCCCEEEEehh------HHHHHHHhCC
Confidence 34555555 455555555555554 2343 333 223443444443 4569999998621 2333344566
Q ss_pred EEEE
Q 023530 207 FLVL 210 (281)
Q Consensus 207 lIVL 210 (281)
.|++
T Consensus 192 ~Viv 195 (315)
T 3ecs_A 192 LVIV 195 (315)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6555
No 270
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=30.88 E-value=70 Score=28.99 Aligned_cols=58 Identities=7% Similarity=-0.072 Sum_probs=37.8
Q ss_pred eEEEEeeCC--hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHHHHHhCCCCEEEeC
Q 023530 130 KVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 130 rIavl~Sg~--GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~~A~~~gIP~~~i~ 188 (281)
+++|..||+ ...|-.|+...... ...++.+|..|+.-..+ ..+.+.|+++|||++++.
T Consensus 48 ~ivVa~SGGkDS~vLL~Ll~~~~~~-~~~~i~vv~vDtg~~~~et~~~v~~~~~~~gi~l~v~~ 110 (325)
T 1zun_A 48 NPVMLYSIGKDSAVMLHLARKAFFP-GKLPFPVMHVDTRWKFQEMYRFRDQMVEEMGLDLITHI 110 (325)
T ss_dssp SEEEECCSSHHHHHHHHHHHHHHTT-SCCSSCEEEECCSCCCHHHHHHHHHHHHTTTCCEEEEC
T ss_pred CEEEEEcChHHHHHHHHHHHHhccc-cCCCEEEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 789999996 36666666654321 12345566667532211 356778999999999876
No 271
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=30.70 E-value=79 Score=25.51 Aligned_cols=82 Identities=12% Similarity=0.147 Sum_probs=45.2
Q ss_pred CCeeEEEEeeCCh---hHHHHHHHhhhcC-CC--CeeEEEEEeC--C-CCCCChhHHHHHHhCCCCEEEeCCCCCChHHH
Q 023530 127 PKYKVAVLASKQE---HCLVDFLYGWQEG-KL--PVEITCVISN--H-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (281)
Q Consensus 127 ~~~rIavl~Sg~G---snL~aLl~~~~~g-~l--~~eI~~Visn--~-pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~ 197 (281)
.++||.|..+|+- .-.++++.+.... .+ ..+|.---+. | ...++..+.+.++++||+. -...+.-. +
T Consensus 4 ~~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~-~~~ar~l~-~-- 79 (157)
T 3n8i_A 4 ATKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPM-SHVARQIT-K-- 79 (157)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCC-CCCCCBCC-H--
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCC-CCceeECC-H--
Confidence 3679999999995 4445565543221 12 1344322222 1 1124667889999999997 32212111 1
Q ss_pred HHHHHhCCCEEEEeccc
Q 023530 198 LLELVQNTDFLVLARYM 214 (281)
Q Consensus 198 l~~~L~~~DlIVLAgYM 214 (281)
+.+++.|+|+...-.
T Consensus 80 --~~~~~~DlIi~M~~~ 94 (157)
T 3n8i_A 80 --EDFATFDYILCMDES 94 (157)
T ss_dssp --HHHHHCSEEEESSHH
T ss_pred --HHcCCCCEEEEeCcH
Confidence 123378999886544
No 272
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=30.70 E-value=1.2e+02 Score=26.98 Aligned_cols=74 Identities=18% Similarity=0.194 Sum_probs=39.1
Q ss_pred CCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh-
Q 023530 125 IDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (281)
Q Consensus 125 ~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~- 203 (281)
+..++||.|+++|. .-..++.+++. +..++..+-++ | +++....|.+ ++.++. .+.+++.+.++
T Consensus 8 ~~~~~~ili~g~g~--~~~~~~~a~~~--~G~~v~~~~~~-~---~~~~~~~~d~----~~~~~~---~d~~~l~~~~~~ 72 (391)
T 1kjq_A 8 RPAATRVMLLGSGE--LGKEVAIECQR--LGVEVIAVDRY-A---DAPAMHVAHR----SHVINM---LDGDALRRVVEL 72 (391)
T ss_dssp STTCCEEEEESCSH--HHHHHHHHHHT--TTCEEEEEESS-T---TCGGGGGSSE----EEECCT---TCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCH--HHHHHHHHHHH--cCCEEEEEECC-C---CCchhhhccc----eEECCC---CCHHHHHHHHHH
Confidence 34567899887753 23445555443 24577666554 3 3343333322 233331 12346777666
Q ss_pred -CCCEEEEeccc
Q 023530 204 -NTDFLVLARYM 214 (281)
Q Consensus 204 -~~DlIVLAgYM 214 (281)
++|+|+. ++-
T Consensus 73 ~~~d~v~~-~~e 83 (391)
T 1kjq_A 73 EKPHYIVP-EIE 83 (391)
T ss_dssp HCCSEEEE-CSS
T ss_pred cCCCEEEE-CCC
Confidence 7888765 454
No 273
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=30.52 E-value=2.6e+02 Score=24.01 Aligned_cols=84 Identities=13% Similarity=0.151 Sum_probs=42.9
Q ss_pred CCCeeEEEEeeCCh--hHHHHHHHhhhcCCCC-eeEEEEEeCCCCCCChhHHHHHHhCCCCE-EEeC-C-CCCCh-----
Q 023530 126 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPY-HYLC-A-KENER----- 194 (281)
Q Consensus 126 ~~~~rIavl~Sg~G--snL~aLl~~~~~g~l~-~eI~~Visn~pd~~~a~~~~~A~~~gIP~-~~i~-~-k~~~~----- 194 (281)
.++|||++++...+ .....++...++. -. .++..+++.. ......+..+.+|++. +.+. . .....
T Consensus 6 ~~~mkIl~v~~~~~~~~~~~~l~~~L~~~-~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (375)
T 3beo_A 6 TERLKVMTIFGTRPEAIKMAPLVLELQKH-PEKIESIVTVTAQ---HRQMLDQVLSIFGITPDFDLNIMKDRQTLIDITT 81 (375)
T ss_dssp SSCEEEEEEECSHHHHHHHHHHHHHHTTC-TTTEEEEEEECCS---SSHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHH
T ss_pred CcCceEEEEecCcHHHHHHHHHHHHHHhC-CCCCCeEEEEcCC---CHHHHHHHHHHcCCCCccccccCCCcccHHHHHH
Confidence 34589988874433 2344556655432 11 5666666643 2222223334577765 3333 1 11111
Q ss_pred --HHHHHHHHh--CCCEEEEecc
Q 023530 195 --EEELLELVQ--NTDFLVLARY 213 (281)
Q Consensus 195 --e~~l~~~L~--~~DlIVLAgY 213 (281)
-..+.+.++ ++|+|+.-+.
T Consensus 82 ~~~~~l~~~l~~~~pDvv~~~~~ 104 (375)
T 3beo_A 82 RGLEGLDKVMKEAKPDIVLVHGD 104 (375)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETT
T ss_pred HHHHHHHHHHHHhCCCEEEEeCC
Confidence 123556666 8999999653
No 274
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=30.50 E-value=3.1e+02 Score=24.93 Aligned_cols=74 Identities=16% Similarity=0.200 Sum_probs=36.9
Q ss_pred CeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCC---CChhHHHH----HHh--CCCCEEEeCCCCCChHHHH
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG---PNSHVIRF----LER--HGIPYHYLCAKENEREEEL 198 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~---~~a~~~~~----A~~--~gIP~~~i~~k~~~~e~~l 198 (281)
.+||++.+=+.......++..... +.+++. ++-.+.. |+....+. |++ .|..+.... .+
T Consensus 161 gl~va~vGD~~~~va~Sl~~~~~~--~G~~v~--~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~--------d~ 228 (328)
T 3grf_A 161 GIKFAYCGDSMNNVTYDLMRGCAL--LGMECH--VCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH--------DC 228 (328)
T ss_dssp GCCEEEESCCSSHHHHHHHHHHHH--HTCEEE--EECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES--------SH
T ss_pred CcEEEEeCCCCcchHHHHHHHHHH--cCCEEE--EECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc--------CH
Confidence 467888877633233334433221 124543 3322221 22224333 344 676665543 14
Q ss_pred HHHHhCCCEEEEecc
Q 023530 199 LELVQNTDFLVLARY 213 (281)
Q Consensus 199 ~~~L~~~DlIVLAgY 213 (281)
.+.++++|+|..--|
T Consensus 229 ~eav~~aDvvytd~W 243 (328)
T 3grf_A 229 KKGCEGVDVVYTDSW 243 (328)
T ss_dssp HHHHTTCSEEEECCC
T ss_pred HHHhcCCCEEEecCc
Confidence 467779999987544
No 275
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=30.38 E-value=2.6e+02 Score=24.05 Aligned_cols=120 Identities=13% Similarity=0.129 Sum_probs=60.6
Q ss_pred HHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHHHHHh
Q 023530 103 DEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLER 179 (281)
Q Consensus 103 ~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~~A~~ 179 (281)
..+...+++.+++-..+.....++...-...+-......+.+|++.. | . -.| +||++..+ .. ....+.+++
T Consensus 82 ~~~v~~i~~~~~ip~is~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~--~-w-~~v-aii~~~d~-~~~~~~~~~~~~~~ 155 (389)
T 4gpa_A 82 VHTLTSFCSALHISLITPSFPTEGESQFVLQLRPSLRGALLSLLDHY--E-W-NCF-VFLYDTDR-GYSILQAIMEKAGQ 155 (389)
T ss_dssp HHHHHHHHHHTTCEEEECSCCCSSCCSSEEECSCCCHHHHHHHHHHT--T-C-CEE-EEEECSTT-CSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCceeccccccccccCCccccCCHHHHHHHHHHHc--C-C-cEE-EEEEecch-hhHHHHHHHHHHHh
Confidence 34556677777654322211112222222233333345666666653 2 1 244 45555322 11 234567788
Q ss_pred CCCCEEEeC-CCCCChH-HHHHHHHh--CCCEEEEecccccCChhHHhhhcCC
Q 023530 180 HGIPYHYLC-AKENERE-EELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYK 228 (281)
Q Consensus 180 ~gIP~~~i~-~k~~~~e-~~l~~~L~--~~DlIVLAgYMrILs~~fl~~~~~r 228 (281)
.|+.+.... ......+ ..+++.++ ++|.||+.+|..-...=+.+..+.+
T Consensus 156 ~g~~v~~~~~~~~~~~d~~~~l~~i~~~~~~vIv~~~~~~~~~~il~~a~~~g 208 (389)
T 4gpa_A 156 NGWHVSAICVENFNDVSYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVG 208 (389)
T ss_dssp TTCEEEEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHT
T ss_pred cCceEEEEeecCCcchhHHHHHHHhhccCCcEEEEEechhHHHHHHHHHHHhC
Confidence 898876644 2211111 34455555 8999999988766555455555443
No 276
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=30.30 E-value=1.1e+02 Score=26.29 Aligned_cols=47 Identities=11% Similarity=-0.014 Sum_probs=24.9
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP 183 (281)
++||+|++.|. |+.+-..+.. .|. ..+|. +.|+ +....+.+.+.|+.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~--~g~-~~~V~--~~d~----~~~~~~~~~~~g~~ 53 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKR--DHP-HYKIV--GYNR----SDRSRDIALERGIV 53 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HCT-TSEEE--EECS----SHHHHHHHHHTTSC
T ss_pred cceEEEEeeCHHHHHHHHHHHh--CCC-CcEEE--EEcC----CHHHHHHHHHcCCc
Confidence 46899999988 5554433332 231 23543 3453 22234455567763
No 277
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=30.20 E-value=60 Score=24.06 Aligned_cols=70 Identities=23% Similarity=0.292 Sum_probs=33.2
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH-HhCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNT 205 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~-L~~~ 205 (281)
+++|+|++.|. |..+-..+.. .| .+|.++ ...+ .-.+.+++.+..+...+. .+ .+.+.+. ++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~--~g---~~v~~~-d~~~-----~~~~~~~~~~~~~~~~d~--~~-~~~l~~~~~~~~ 71 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHR--MG---HEVLAV-DINE-----EKVNAYASYATHAVIANA--TE-ENELLSLGIRNF 71 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TT---CCCEEE-ESCH-----HHHHTTTTTCSEEEECCT--TC-HHHHHTTTGGGC
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CC---CEEEEE-eCCH-----HHHHHHHHhCCEEEEeCC--CC-HHHHHhcCCCCC
Confidence 45799998765 4443333332 24 355433 3221 122334445665444331 11 2233332 3478
Q ss_pred CEEEEe
Q 023530 206 DFLVLA 211 (281)
Q Consensus 206 DlIVLA 211 (281)
|+|+.+
T Consensus 72 d~vi~~ 77 (144)
T 2hmt_A 72 EYVIVA 77 (144)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 988876
No 278
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=29.85 E-value=72 Score=27.47 Aligned_cols=20 Identities=10% Similarity=0.041 Sum_probs=13.4
Q ss_pred CCeeEEEEeeCC-hhHHHHHH
Q 023530 127 PKYKVAVLASKQ-EHCLVDFL 146 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl 146 (281)
.++||+|++.|. |+.+-..+
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l 23 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINL 23 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHH
Confidence 357999999998 55544333
No 279
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=29.83 E-value=1e+02 Score=26.72 Aligned_cols=71 Identities=14% Similarity=0.124 Sum_probs=35.8
Q ss_pred CeeEEEEeeCChhHHHHHHHhhhc-CCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCCChHHHHHHHHh--
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENEREEELLELVQ-- 203 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~~-g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~~~e~~l~~~L~-- 203 (281)
++||.|+++|.- .++....+. +.. .++.++-+| +++++...|. .++.++ .....+-+++.++++
T Consensus 4 ~~~Ili~g~g~~---~~l~~~l~~~~~~-~~v~~~d~~----~~~~~~~~~d----~~~~~~~~~~~~~~~~l~~~~~~~ 71 (331)
T 2pn1_A 4 KPHLLITSAGRR---AKLVEYFVKEFKT-GRVSTADCS----PLASALYMAD----QHYIVPKIDEVEYIDHLLTLCQDE 71 (331)
T ss_dssp CCEEEEESCTTC---HHHHHHHHHHCCS-SEEEEEESC----TTCGGGGGSS----SEEECCCTTSTTHHHHHHHHHHHH
T ss_pred cceEEEecCCch---HHHHHHHHHhcCC-CEEEEEeCC----CcchhHHhhh----ceecCCCCCChhHHHHHHHHHHHc
Confidence 468888876654 234443332 211 456555444 3444443332 233444 111223356777776
Q ss_pred CCCEEEE
Q 023530 204 NTDFLVL 210 (281)
Q Consensus 204 ~~DlIVL 210 (281)
++|+|+.
T Consensus 72 ~~d~vi~ 78 (331)
T 2pn1_A 72 GVTALLT 78 (331)
T ss_dssp TCCEEEE
T ss_pred CCCEEEe
Confidence 8999875
No 280
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=29.83 E-value=31 Score=25.78 Aligned_cols=49 Identities=16% Similarity=0.210 Sum_probs=28.5
Q ss_pred EeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 134 l~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
+++|.-..+ ++++.|+ +..+.+-+|-++.--.....+|++++||++.+.
T Consensus 19 ~v~G~~~v~----kai~~gk--a~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~ 67 (101)
T 3on1_A 19 LLTGEEQVV----KAVQNGQ--VTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVG 67 (101)
T ss_dssp EEESHHHHH----HHHHTTC--CSEEEEETTSCHHHHHHHHHHHHHHTCCEEEES
T ss_pred EeECHHHHH----HHHHcCC--CcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 345544444 4445564 566655555421101245677999999999875
No 281
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=29.80 E-value=1.3e+02 Score=26.97 Aligned_cols=94 Identities=11% Similarity=0.062 Sum_probs=50.6
Q ss_pred CCeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhC
Q 023530 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 127 ~~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
..++++|+++|.- ..+++|... .+ ..+| .+.|+. +...-+.++.+++|+++...+ +.+.+++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~--~~--~~~V--~v~~r~-~a~~la~~l~~~~g~~~~~~~---------~~eav~~ 183 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSAR--FA--LEAI--LVHDPY-ASPEILERIGRRCGVPARMAA---------PADIAAQ 183 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH--SC--CCEE--EEECTT-CCHHHHHHHHHHHTSCEEECC---------HHHHHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHh--CC--CcEE--EEECCc-HHHHHHHHHHHhcCCeEEEeC---------HHHHHhh
Confidence 3468999999972 555555542 12 1133 356652 111122233334688876642 2245568
Q ss_pred CCEEEEeccc--ccCChhHHhhhcCCcee---ccCCCCC
Q 023530 205 TDFLVLARYM--QPVPLQKEAYLGYKLLE---SLSSKGS 238 (281)
Q Consensus 205 ~DlIVLAgYM--rILs~~fl~~~~~riIN---SLLP~f~ 238 (281)
+|+||+|--- -++..+.++ ++..|+ |--|..+
T Consensus 184 aDIVi~aT~s~~pvl~~~~l~--~G~~V~~vGs~~p~~~ 220 (313)
T 3hdj_A 184 ADIVVTATRSTTPLFAGQALR--AGAFVGAIGSSLPHTR 220 (313)
T ss_dssp CSEEEECCCCSSCSSCGGGCC--TTCEEEECCCSSTTCC
T ss_pred CCEEEEccCCCCcccCHHHcC--CCcEEEECCCCCCchh
Confidence 9999998533 233333322 466777 6566543
No 282
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=29.54 E-value=85 Score=24.07 Aligned_cols=59 Identities=12% Similarity=0.279 Sum_probs=34.2
Q ss_pred EeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCC-ChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 134 l~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~-~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
+++|.-... ++++.|. +..+.+-+|-++.. -.....+|+++|||++++.++ +++=.++-
T Consensus 30 l~~G~~~v~----kal~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk-----~eLG~a~G 89 (120)
T 1vq8_F 30 VKKGTNETT----KSIERGS--AELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQ-----DDLGHAAG 89 (120)
T ss_dssp EEESHHHHH----HHHHHTC--CSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEESCH-----HHHHHHTT
T ss_pred EeECHHHHH----HHHHcCC--ceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECCH-----HHHHHHhC
Confidence 444543444 4444564 56776666642211 245778999999998887632 24555554
No 283
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=29.50 E-value=3.2e+02 Score=24.80 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=19.7
Q ss_pred HHHhCCCCEEEeCCCCCChHHHHHHHHhCCCEEEEecc
Q 023530 176 FLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARY 213 (281)
Q Consensus 176 ~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~DlIVLAgY 213 (281)
.|++.|..+.... .+.+.++++|+|.+-.|
T Consensus 205 ~a~~~g~~v~~~~--------d~~eav~~aDvvyt~~w 234 (323)
T 3gd5_A 205 IAGRTGAEVQILR--------DPFEAARGAHILYTDVW 234 (323)
T ss_dssp HHHHHTCCEEEES--------CHHHHHTTCSEEEECCC
T ss_pred HHHHcCCeEEEEC--------CHHHHhcCCCEEEEece
Confidence 3445676665543 13466779999998877
No 284
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=29.49 E-value=80 Score=24.46 Aligned_cols=43 Identities=7% Similarity=0.224 Sum_probs=27.6
Q ss_pred HHHHHHhCCCCEEEeC-CCCCChHHHHHHHHh--CCCEEEEecccc
Q 023530 173 VIRFLERHGIPYHYLC-AKENEREEELLELVQ--NTDFLVLARYMQ 215 (281)
Q Consensus 173 ~~~~A~~~gIP~~~i~-~k~~~~e~~l~~~L~--~~DlIVLAgYMr 215 (281)
..+.+++.|+++...- -...+..++|.+..+ ++|+||+....+
T Consensus 83 ~~~~~~~~g~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~ 128 (155)
T 3dlo_A 83 AVSIIRKEGAEGEEHLLVRGKEPPDDIVDFADEVDAIAIVIGIRKR 128 (155)
T ss_dssp HHHHHHHTTCCEEEEEEESSSCHHHHHHHHHHHTTCSEEEEECCEE
T ss_pred HHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHcCCCEEEECCCCC
Confidence 4556677888876421 111234567888777 899999976543
No 285
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=29.18 E-value=72 Score=24.63 Aligned_cols=49 Identities=16% Similarity=0.346 Sum_probs=30.3
Q ss_pred EeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCC-ChhHHHHHHhCCCCEEEeC
Q 023530 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 134 l~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~-~a~~~~~A~~~gIP~~~i~ 188 (281)
+++|.-.... +++.|. +..+.+-+|-++.. -.....+|++++||+.++.
T Consensus 30 l~~G~~~v~k----ai~~gk--a~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~ 79 (120)
T 1xbi_A 30 IKKGANEVTK----AVERGI--AKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVA 79 (120)
T ss_dssp EEESHHHHHH----HHHHTC--CSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEES
T ss_pred ccccHHHHHH----HHHcCC--ceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeC
Confidence 5555444444 444564 56776666642211 2457789999999998876
No 286
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=29.06 E-value=2.5e+02 Score=25.86 Aligned_cols=81 Identities=10% Similarity=0.118 Sum_probs=50.6
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh-CC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-NT 205 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~-~~ 205 (281)
-++++|.++|+ |..+-..+.. .| ++|+ +++. + ..-.++++++|. ..++ .+ +++. ++
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~--~G---akVv--vsD~-~---~~~~~~a~~~ga--~~v~-----~~----ell~~~~ 232 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAE--AG---AQLL--VADT-D---TERVAHAVALGH--TAVA-----LE----DVLSTPC 232 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECS-C---HHHHHHHHHTTC--EECC-----GG----GGGGCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHH--CC---CEEE--EEeC-C---ccHHHHHHhcCC--EEeC-----hH----HhhcCcc
Confidence 46899998887 5554444442 34 5665 6764 2 112567777763 2322 11 3456 89
Q ss_pred CEEEEecccccCChhHHhhhcCCce
Q 023530 206 DFLVLARYMQPVPLQKEAYLGYKLL 230 (281)
Q Consensus 206 DlIVLAgYMrILs~~fl~~~~~riI 230 (281)
|+++-+.--..|..+-++..+.++|
T Consensus 233 DIliP~A~~~~I~~~~~~~lk~~iV 257 (355)
T 1c1d_A 233 DVFAPCAMGGVITTEVARTLDCSVV 257 (355)
T ss_dssp SEEEECSCSCCBCHHHHHHCCCSEE
T ss_pred ceecHhHHHhhcCHHHHhhCCCCEE
Confidence 9999988777888887777765543
No 287
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=28.99 E-value=46 Score=32.45 Aligned_cols=35 Identities=14% Similarity=0.279 Sum_probs=30.4
Q ss_pred ccEEEEEEcCCCcchHHHHHHHHHhCCCeEeEeeeec
Q 023530 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFV 77 (281)
Q Consensus 41 ~~~iltV~G~DrpGIVa~VS~~La~~giNI~dl~q~~ 77 (281)
....+.+.=|||||-.+++++.|. +.||++++...
T Consensus 337 r~~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~ 371 (514)
T 1tdj_A 337 REALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRF 371 (514)
T ss_dssp CEEEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEEC
T ss_pred CcccccccCCCCCchHHHHHHHhC--CCceEEEEeec
Confidence 457788899999999999999997 79999998753
No 288
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=28.89 E-value=77 Score=27.34 Aligned_cols=62 Identities=16% Similarity=0.127 Sum_probs=32.9
Q ss_pred eeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCCCE
Q 023530 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (281)
Q Consensus 129 ~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~Dl 207 (281)
+||+|++.|. |+.+-..+.. .| .+|. +.|+. ... .+.+.+.|+.. .+ + +.+.++++|+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~--~G---~~V~--~~dr~---~~~-~~~~~~~g~~~--~~----~----~~~~~~~aDv 60 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK--AG---CSVT--IWNRS---PEK-AEELAALGAER--AA----T----PCEVVESCPV 60 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECSS---GGG-GHHHHHTTCEE--CS----S----HHHHHHHCSE
T ss_pred CEEEEEeecHHHHHHHHHHHH--CC---CeEE--EEcCC---HHH-HHHHHHCCCee--cC----C----HHHHHhcCCE
Confidence 6899999998 5554433332 34 3554 44541 122 33444556522 11 1 2244456788
Q ss_pred EEEe
Q 023530 208 LVLA 211 (281)
Q Consensus 208 IVLA 211 (281)
|+++
T Consensus 61 vi~~ 64 (287)
T 3pef_A 61 TFAM 64 (287)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8886
No 289
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=28.80 E-value=2.9e+02 Score=24.03 Aligned_cols=72 Identities=17% Similarity=0.177 Sum_probs=38.7
Q ss_pred CeeEEEEe-eCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--
Q 023530 128 KYKVAVLA-SKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (281)
Q Consensus 128 ~~rIavl~-Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~-- 203 (281)
..+|.|.+ +|. |...-.++.+ .| ++|.++..+. .-+++|+++|..... +....+..+++.+...
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~--~G---a~Vi~~~~~~------~~~~~~~~~ga~~~~-~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKM--KG---AHTIAVASTD------EKLKIAKEYGAEYLI-NASKEDILRQVLKFTNGK 216 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHH--TT---CEEEEEESSH------HHHHHHHHTTCSEEE-ETTTSCHHHHHHHHTTTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHH--CC---CEEEEEeCCH------HHHHHHHHcCCcEEE-eCCCchHHHHHHHHhCCC
Confidence 35677766 333 3433333332 34 5776665542 236788999965444 3222233345555554
Q ss_pred CCCEEEEe
Q 023530 204 NTDFLVLA 211 (281)
Q Consensus 204 ~~DlIVLA 211 (281)
.+|+++-+
T Consensus 217 g~D~vid~ 224 (334)
T 3qwb_A 217 GVDASFDS 224 (334)
T ss_dssp CEEEEEEC
T ss_pred CceEEEEC
Confidence 58888754
No 290
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=28.79 E-value=34 Score=30.42 Aligned_cols=34 Identities=12% Similarity=0.239 Sum_probs=22.6
Q ss_pred CeeEEEEe-eCC-hhHHHHHHHhhhcCCCCeeEEEEEeCC
Q 023530 128 KYKVAVLA-SKQ-EHCLVDFLYGWQEGKLPVEITCVISNH 165 (281)
Q Consensus 128 ~~rIavl~-Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~ 165 (281)
|+||+|.+ +|+ |..+...+.. .. ..++++++...
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~--~~--~~eLv~~~d~~ 42 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLA--AP--DATLVGALDRT 42 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHH--CT--TEEEEEEBCCT
T ss_pred ccEEEEECCCCHHHHHHHHHHHh--CC--CCEEEEEEEec
Confidence 57999998 776 6555544442 23 37899887754
No 291
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=28.79 E-value=87 Score=25.98 Aligned_cols=65 Identities=20% Similarity=0.244 Sum_probs=32.5
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCC
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~ 205 (281)
.++||+|++.|. |+.+-..+.. .| .+|.+ .++ +..-.+...+.|+.+. + +.+.++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~--~g---~~V~~--~~r----~~~~~~~~~~~g~~~~--~---------~~~~~~~~ 84 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVG--SG---FKVVV--GSR----NPKRTARLFPSAAQVT--F---------QEEAVSSP 84 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH--TT---CCEEE--EES----SHHHHHHHSBTTSEEE--E---------HHHHTTSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHH--CC---CEEEE--EeC----CHHHHHHHHHcCCcee--c---------HHHHHhCC
Confidence 457999999887 5444333322 34 35543 343 1111233333465432 1 22445689
Q ss_pred CEEEEecc
Q 023530 206 DFLVLARY 213 (281)
Q Consensus 206 DlIVLAgY 213 (281)
|+|++|=-
T Consensus 85 DvVi~av~ 92 (215)
T 2vns_A 85 EVIFVAVF 92 (215)
T ss_dssp SEEEECSC
T ss_pred CEEEECCC
Confidence 99998743
No 292
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=28.70 E-value=1e+02 Score=26.65 Aligned_cols=40 Identities=18% Similarity=0.262 Sum_probs=18.4
Q ss_pred HHHHHHhCCCCEEEeCCCCC-ChHHHHHHHHh--CCCEEEEec
Q 023530 173 VIRFLERHGIPYHYLCAKEN-EREEELLELVQ--NTDFLVLAR 212 (281)
Q Consensus 173 ~~~~A~~~gIP~~~i~~k~~-~~e~~l~~~L~--~~DlIVLAg 212 (281)
+.+.|+++|..+...+...+ ..+.+.++.+. ++|-||+++
T Consensus 85 i~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 127 (338)
T 3dbi_A 85 AARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYP 127 (338)
T ss_dssp HHHHHHHTTCEEEEEECTTSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeC
Confidence 44556666666555442211 11222333332 566666654
No 293
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=28.68 E-value=1.5e+02 Score=24.94 Aligned_cols=72 Identities=10% Similarity=0.100 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHH
Q 023530 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE 178 (281)
Q Consensus 99 ~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~ 178 (281)
..++.+.+++.+++.|... .++.+........+++.+.+.. +-+||....+ .+...++.+.
T Consensus 25 ~~~~~~gi~~~a~~~g~~~--------------~~~~~~~~~~~~~~~~~l~~~~----vdGiIi~~~~-~~~~~~~~l~ 85 (294)
T 3qk7_A 25 FLEMISWIGIELGKRGLDL--------------LLIPDEPGEKYQSLIHLVETRR----VDALIVAHTQ-PEDFRLQYLQ 85 (294)
T ss_dssp HHHHHHHHHHHHHHTTCEE--------------EEEEECTTCCCHHHHHHHHHTC----CSEEEECSCC-SSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEE--------------EEEeCCChhhHHHHHHHHHcCC----CCEEEEeCCC-CChHHHHHHH
Confidence 4567777888887777542 2222322111122333333333 2233322111 2336778889
Q ss_pred hCCCCEEEeCC
Q 023530 179 RHGIPYHYLCA 189 (281)
Q Consensus 179 ~~gIP~~~i~~ 189 (281)
+.|||+..++.
T Consensus 86 ~~~iPvV~~~~ 96 (294)
T 3qk7_A 86 KQNFPFLALGR 96 (294)
T ss_dssp HTTCCEEEESC
T ss_pred hCCCCEEEECC
Confidence 99999999983
No 294
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=28.62 E-value=73 Score=26.13 Aligned_cols=13 Identities=15% Similarity=0.258 Sum_probs=9.9
Q ss_pred CCCeeEEEEeeCC
Q 023530 126 DPKYKVAVLASKQ 138 (281)
Q Consensus 126 ~~~~rIavl~Sg~ 138 (281)
++++|++|+.+|.
T Consensus 3 ~~~~rv~IistGd 15 (178)
T 2pbq_A 3 EKKAVIGVVTISD 15 (178)
T ss_dssp --CCEEEEEEECH
T ss_pred CCCCEEEEEEeCC
Confidence 4678999999986
No 295
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=28.44 E-value=76 Score=27.83 Aligned_cols=43 Identities=16% Similarity=0.276 Sum_probs=25.5
Q ss_pred hHHHHHHhCCCCEEEeCCCCCChHHHHHH-HHh-CCCEEEEeccc
Q 023530 172 HVIRFLERHGIPYHYLCAKENEREEELLE-LVQ-NTDFLVLARYM 214 (281)
Q Consensus 172 ~~~~~A~~~gIP~~~i~~k~~~~e~~l~~-~L~-~~DlIVLAgYM 214 (281)
.+.+.++++|+.+.++........++.++ +++ ++|.|++.++.
T Consensus 28 Gi~~~~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~dgIi~~~~~ 72 (318)
T 2fqx_A 28 GISRFAQENNAKCKYVTASTDAEYVPSLSAFADENMGLVVACGSF 72 (318)
T ss_dssp HHHHHHHHTTCEEEEEECCSGGGHHHHHHHHHHTTCSEEEEESTT
T ss_pred HHHHHHHHhCCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEECChh
Confidence 34556788888777665322122223333 444 79999998865
No 296
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=28.33 E-value=2.3e+02 Score=24.95 Aligned_cols=71 Identities=15% Similarity=0.209 Sum_probs=38.5
Q ss_pred CeeEEEEeeCC--hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--
Q 023530 128 KYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (281)
Q Consensus 128 ~~rIavl~Sg~--GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~-- 203 (281)
..+|.|.+..+ |...-.++.+ .| ++|.++..+. + -+++|+++|..... +.. .+..+++.+...
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~--~G---a~Vi~~~~~~-~-----~~~~~~~~ga~~v~-~~~-~~~~~~v~~~~~~~ 226 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKG--MG---AKVIAVVNRT-A-----ATEFVKSVGADIVL-PLE-EGWAKAVREATGGA 226 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHH--TT---CEEEEEESSG-G-----GHHHHHHHTCSEEE-ESS-TTHHHHHHHHTTTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHH--cC---CEEEEEeCCH-H-----HHHHHHhcCCcEEe-cCc-hhHHHHHHHHhCCC
Confidence 34676666423 3333333332 34 5777666653 2 25788888866543 322 233445555554
Q ss_pred CCCEEEEe
Q 023530 204 NTDFLVLA 211 (281)
Q Consensus 204 ~~DlIVLA 211 (281)
++|+++-+
T Consensus 227 g~Dvvid~ 234 (342)
T 4eye_A 227 GVDMVVDP 234 (342)
T ss_dssp CEEEEEES
T ss_pred CceEEEEC
Confidence 58888753
No 297
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=28.22 E-value=1.3e+02 Score=27.84 Aligned_cols=74 Identities=15% Similarity=0.079 Sum_probs=35.3
Q ss_pred CeeEEEEeeCChhHHHHHHHhhh-cCCCCeeEEEEEeCCCCCCChhHHHHHHhC------CCCEEEeCCCCCChHHHHHH
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVISNHDRGPNSHVIRFLERH------GIPYHYLCAKENEREEELLE 200 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~-~g~l~~eI~~Visn~pd~~~a~~~~~A~~~------gIP~~~i~~k~~~~e~~l~~ 200 (281)
|+||+|++.|. -=..++.... .|....+|. + +++ ....+.+.++++ ++.+..++- ...+.+.+
T Consensus 1 M~kVlIiGaGg--iG~~ia~~L~~~g~~~~~V~-v-~~r---~~~~~~~la~~l~~~~~~~~~~~~~D~---~d~~~l~~ 70 (405)
T 4ina_A 1 MAKVLQIGAGG--VGGVVAHKMAMNREVFSHIT-L-ASR---TLSKCQEIAQSIKAKGYGEIDITTVDA---DSIEELVA 70 (405)
T ss_dssp -CEEEEECCSH--HHHHHHHHHHTCTTTCCEEE-E-EES---CHHHHHHHHHHHHHTTCCCCEEEECCT---TCHHHHHH
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCCCCceEEE-E-EEC---CHHHHHHHHHHhhhhcCCceEEEEecC---CCHHHHHH
Confidence 46899998753 1122333222 342112443 3 333 122344555543 355555541 12345666
Q ss_pred HHh--CCCEEEEe
Q 023530 201 LVQ--NTDFLVLA 211 (281)
Q Consensus 201 ~L~--~~DlIVLA 211 (281)
+++ ++|+||-+
T Consensus 71 ~l~~~~~DvVin~ 83 (405)
T 4ina_A 71 LINEVKPQIVLNI 83 (405)
T ss_dssp HHHHHCCSEEEEC
T ss_pred HHHhhCCCEEEEC
Confidence 666 48888754
No 298
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=28.17 E-value=1e+02 Score=29.63 Aligned_cols=70 Identities=16% Similarity=0.174 Sum_probs=37.6
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhC--CCCEEEeCCCCCChHHHHHHHHh
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH--GIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~--gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
.++||+|++.|. |.+|-.-+.. .| .+|. +.|+ ....+.+.+++. |..+.... + -+++.+.|+
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~--~G---~~V~--v~dr---~~~~~~~l~~~g~~g~~i~~~~----s-~~e~v~~l~ 67 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMND--HG---FVVC--AFNR---TVSKVDDFLANEAKGTKVVGAQ----S-LKEMVSKLK 67 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHH--TT---CCEE--EECS---STHHHHHHHHTTTTTSSCEECS----S-HHHHHHTBC
T ss_pred CCCEEEEEChhHHHHHHHHHHHH--CC---CEEE--EEeC---CHHHHHHHHhcccCCCceeccC----C-HHHHHhhcc
Confidence 467999999998 7776544432 35 3444 4565 233344444432 32222211 1 233444445
Q ss_pred CCCEEEEe
Q 023530 204 NTDFLVLA 211 (281)
Q Consensus 204 ~~DlIVLA 211 (281)
++|+|+++
T Consensus 68 ~aDvVil~ 75 (484)
T 4gwg_A 68 KPRRIILL 75 (484)
T ss_dssp SSCEEEEC
T ss_pred CCCEEEEe
Confidence 79999987
No 299
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=27.99 E-value=2.3e+02 Score=23.08 Aligned_cols=72 Identities=11% Similarity=0.116 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCCh-hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHH
Q 023530 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (281)
Q Consensus 99 ~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~G-snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A 177 (281)
...+.+.+++.+++.|.+ +.++.+... .....+++.+.+....+ ..+....+ ......+.+
T Consensus 17 ~~~~~~gi~~~a~~~g~~--------------~~~~~~~~~~~~~~~~~~~l~~~~vdg--iIi~~~~~--~~~~~~~~~ 78 (272)
T 3o74_A 17 YARIAKQLEQGARARGYQ--------------LLIASSDDQPDSERQLQQLFRARRCDA--LFVASCLP--PEDDSYREL 78 (272)
T ss_dssp HHHHHHHHHHHHHHTTCE--------------EEEEECTTCHHHHHHHHHHHHHTTCSE--EEECCCCC--SSCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCE--------------EEEEeCCCCHHHHHHHHHHHHHcCCCE--EEEecCcc--ccHHHHHHH
Confidence 456777888888877754 223333332 22233444433333222 21222111 134567888
Q ss_pred HhCCCCEEEeC
Q 023530 178 ERHGIPYHYLC 188 (281)
Q Consensus 178 ~~~gIP~~~i~ 188 (281)
.+.|||+..++
T Consensus 79 ~~~~iPvV~~~ 89 (272)
T 3o74_A 79 QDKGLPVIAID 89 (272)
T ss_dssp HHTTCCEEEES
T ss_pred HHcCCCEEEEc
Confidence 99999999998
No 300
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=27.97 E-value=32 Score=25.68 Aligned_cols=52 Identities=17% Similarity=0.134 Sum_probs=29.6
Q ss_pred HHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEe-CCCCCChHHHHHHHHh
Q 023530 145 FLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL-CAKENEREEELLELVQ 203 (281)
Q Consensus 145 Ll~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i-~~k~~~~e~~l~~~L~ 203 (281)
..++++.|. +..+.+-+|-|+.--.....+|++++||++.+ .++ +++=.++-
T Consensus 24 v~kai~~gk--a~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~~~s~-----~eLG~a~G 76 (101)
T 1w41_A 24 SIQYAKMGG--AKLIIVARNARPDIKEDIEYYARLSGIPVYEFEGTS-----VELGTLLG 76 (101)
T ss_dssp HHHHHHHTC--CSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESSCH-----HHHHHHTT
T ss_pred HHHHHHcCC--CcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEecCCH-----HHHHHHhC
Confidence 344444564 56665555532110134667899999998875 422 34656665
No 301
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=27.90 E-value=84 Score=25.97 Aligned_cols=82 Identities=11% Similarity=0.058 Sum_probs=40.4
Q ss_pred CCCCeeEEEEeeCCh---hHHHHHHHhhhcC-CCCeeE--EEEEeCCCCCCChhHHH-HHHhCCCCEEEeC-CCCCChHH
Q 023530 125 IDPKYKVAVLASKQE---HCLVDFLYGWQEG-KLPVEI--TCVISNHDRGPNSHVIR-FLERHGIPYHYLC-AKENEREE 196 (281)
Q Consensus 125 ~~~~~rIavl~Sg~G---snL~aLl~~~~~g-~l~~eI--~~Visn~pd~~~a~~~~-~A~~~gIP~~~i~-~k~~~~e~ 196 (281)
...++||.|..+|+- .-.++|+.....+ ....+| +++...+...++..+.+ .++++||+.--.. +....
T Consensus 31 ~~~~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~SAGt~~~~g~~~~~~a~~~l~~e~Gidis~h~sr~l~~--- 107 (180)
T 4egs_A 31 GRGSMRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKSAGVFAPEGFPASSEAVEVLKKEYGIDISDHRAKSLRE--- 107 (180)
T ss_dssp ---CCEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCCTTCCCCHHHHHHHHHHHCCCCTTCCCCBCCS---
T ss_pred CCCCeEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEEeeecCcCCCCCChHHHHHHHHHcCcCcccCcccccCh---
Confidence 345789999999995 4455566543221 113444 33322211102223333 4578999863221 21111
Q ss_pred HHHHHHhCCCEEEEec
Q 023530 197 ELLELVQNTDFLVLAR 212 (281)
Q Consensus 197 ~l~~~L~~~DlIVLAg 212 (281)
+.+++.|+|+...
T Consensus 108 ---~d~~~~DlIi~Md 120 (180)
T 4egs_A 108 ---EDLKGADLVLAMA 120 (180)
T ss_dssp ---HHHHHCSEEEESS
T ss_pred ---hhCcCCCEEEEcC
Confidence 1233789999864
No 302
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=27.87 E-value=2.7e+02 Score=23.99 Aligned_cols=75 Identities=5% Similarity=-0.079 Sum_probs=38.5
Q ss_pred CeeEEEEeeCC--hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHh-------CCCCEEEeCCCCCChHHH
Q 023530 128 KYKVAVLASKQ--EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLER-------HGIPYHYLCAKENEREEE 197 (281)
Q Consensus 128 ~~rIavl~Sg~--Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~-------~gIP~~~i~~k~~~~e~~ 197 (281)
++||.|.+..+ |+ ..+.|++ .| .+|.++.-+ ++ +.....+..+. .++.++..+- .+.+.
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~---~g---~~V~~~~r~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d~~~ 93 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLK---LN---QVVIGLDNF-ST-GHQYNLDEVKTLVSTEQWSRFCFIEGDI---RDLTT 93 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---TT---CEEEEEECC-SS-CCHHHHHHHHHTSCHHHHTTEEEEECCT---TCHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHH---CC---CEEEEEeCC-CC-CchhhhhhhhhccccccCCceEEEEccC---CCHHH
Confidence 45777766433 33 3344444 35 467655443 22 12222222222 4666666551 12345
Q ss_pred HHHHHhCCCEEEE-ecc
Q 023530 198 LLELVQNTDFLVL-ARY 213 (281)
Q Consensus 198 l~~~L~~~DlIVL-AgY 213 (281)
+.++++++|.||- ||+
T Consensus 94 ~~~~~~~~d~Vih~A~~ 110 (351)
T 3ruf_A 94 CEQVMKGVDHVLHQAAL 110 (351)
T ss_dssp HHHHTTTCSEEEECCCC
T ss_pred HHHHhcCCCEEEECCcc
Confidence 6677779999884 444
No 303
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=27.80 E-value=97 Score=23.93 Aligned_cols=52 Identities=19% Similarity=0.263 Sum_probs=31.2
Q ss_pred HHHhhhcCCCCeeEEEEEeCCCCCC-ChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 145 FLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 145 Ll~~~~~g~l~~eI~~Visn~pd~~-~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
..++++.|. +..+.+-+|-.+.. -.....+|++++||++++.++ ++|=.++-
T Consensus 36 v~kal~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~sk-----~eLG~a~G 88 (124)
T 2fc3_A 36 TTKAVERGL--AKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSK-----KRLGEAAG 88 (124)
T ss_dssp HHHHHHTTC--CSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESCH-----HHHHHHTT
T ss_pred HHHHHHcCC--ceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECCH-----HHHHHHhC
Confidence 344445564 56776666642111 245778999999999887632 24555554
No 304
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=27.79 E-value=1.7e+02 Score=24.53 Aligned_cols=73 Identities=7% Similarity=-0.108 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHH
Q 023530 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE 178 (281)
Q Consensus 99 ~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~ 178 (281)
...+.+.+++.++++|.+ +.++.+.....-...++.+.+.. .+-..+....++ ...+.++.+.
T Consensus 17 ~~~~~~gi~~~a~~~g~~--------------~~~~~~~~~~~~~~~i~~l~~~~--vdgiii~~~~~~-~~~~~~~~~~ 79 (306)
T 8abp_A 17 FQTEWKFADKAGKDLGFE--------------VIKIAVPDGEKTLNAIDSLAASG--AKGFVICTPDPK-LGSAIVAKAR 79 (306)
T ss_dssp HHHHHHHHHHHHHHHTEE--------------EEEEECCSHHHHHHHHHHHHHTT--CCEEEEECSCGG-GHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCE--------------EEEeCCCCHHHHHHHHHHHHHcC--CCEEEEeCCCch-hhHHHHHHHH
Confidence 466777888888888753 22333433222222333322222 222222222110 1124577889
Q ss_pred hCCCCEEEeC
Q 023530 179 RHGIPYHYLC 188 (281)
Q Consensus 179 ~~gIP~~~i~ 188 (281)
+.|||+..++
T Consensus 80 ~~~iPvV~~~ 89 (306)
T 8abp_A 80 GYDMKVIAVD 89 (306)
T ss_dssp HTTCEEEEES
T ss_pred HCCCcEEEeC
Confidence 9999999987
No 305
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=27.60 E-value=1.3e+02 Score=26.35 Aligned_cols=20 Identities=25% Similarity=0.321 Sum_probs=13.8
Q ss_pred CeeEEEEeeCC-hhHHHHHHH
Q 023530 128 KYKVAVLASKQ-EHCLVDFLY 147 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~ 147 (281)
++||+|++.|. |+.+-..+.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~ 24 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLA 24 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHH
Confidence 36999999988 555544443
No 306
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=27.55 E-value=67 Score=30.59 Aligned_cols=68 Identities=12% Similarity=0.126 Sum_probs=36.9
Q ss_pred eeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCC-----EEEeCCCCCChHHHHHHHH
Q 023530 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP-----YHYLCAKENEREEELLELV 202 (281)
Q Consensus 129 ~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP-----~~~i~~k~~~~e~~l~~~L 202 (281)
|||+|++.|. |+++-..+.. .| .+|. +.|+ ....+.+.++++|.. +.... + -+++.+.+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~--~G---~~V~--v~dr---~~~~~~~l~~~~g~~~~~~~i~~~~----~-~~e~v~~l 66 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAE--KG---FKVA--VFNR---TYSKSEEFMKANASAPFAGNLKAFE----T-MEAFAASL 66 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHH--TT---CCEE--EECS---SHHHHHHHHHHTTTSTTGGGEEECS----C-HHHHHHHB
T ss_pred CEEEEEChHHHHHHHHHHHHH--CC---CEEE--EEeC---CHHHHHHHHHhcCCCCCCCCeEEEC----C-HHHHHhcc
Confidence 5899999998 6766554442 35 3553 4455 223455556665632 11111 1 12333434
Q ss_pred hCCCEEEEe
Q 023530 203 QNTDFLVLA 211 (281)
Q Consensus 203 ~~~DlIVLA 211 (281)
+++|+|+++
T Consensus 67 ~~aDvVila 75 (478)
T 1pgj_A 67 KKPRKALIL 75 (478)
T ss_dssp CSSCEEEEC
T ss_pred cCCCEEEEe
Confidence 468888887
No 307
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=27.41 E-value=1.4e+02 Score=23.84 Aligned_cols=81 Identities=16% Similarity=0.143 Sum_probs=44.8
Q ss_pred CeeEEEEeeCCh---hHHHHHHHhhhcC-CC--CeeEE--EEEeCCC-CCCChhHHHHHHhCCCCEEEeCCCCCChHHHH
Q 023530 128 KYKVAVLASKQE---HCLVDFLYGWQEG-KL--PVEIT--CVISNHD-RGPNSHVIRFLERHGIPYHYLCAKENEREEEL 198 (281)
Q Consensus 128 ~~rIavl~Sg~G---snL~aLl~~~~~g-~l--~~eI~--~Visn~p-d~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l 198 (281)
|+||.|..+|+- .-.++|+...... .+ ..+|. ++-.-++ ..++..+.+.++++||+.-....+.-. +
T Consensus 1 m~~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~~~a~~~l~~~Gid~s~~~ar~l~-~--- 76 (156)
T 2gi4_A 1 MKKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGEHDGEGMHYGTKNKLAQLNIEHKNFTSKKLT-Q--- 76 (156)
T ss_dssp CCEEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCSSTTCCCCHHHHHHHHHTSCSCCCCCCCBCC-H---
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCCCccCCccccCC-H---
Confidence 358999999985 4455565553221 11 13443 3322111 115667889999999986442222111 1
Q ss_pred HHHHhCCCEEEEecc
Q 023530 199 LELVQNTDFLVLARY 213 (281)
Q Consensus 199 ~~~L~~~DlIVLAgY 213 (281)
+.+++.|+|+...-
T Consensus 77 -~d~~~~DlIi~Md~ 90 (156)
T 2gi4_A 77 -KLCDESDFLITMDN 90 (156)
T ss_dssp -HHHTTCSEEECCCH
T ss_pred -HHhccCCEEEEECC
Confidence 22347999998653
No 308
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=27.39 E-value=1.7e+02 Score=25.65 Aligned_cols=74 Identities=16% Similarity=0.067 Sum_probs=39.8
Q ss_pred CeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--CC
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NT 205 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~--~~ 205 (281)
..+|.|.+.+++--+.++..+...| ++|.++..+ +++ +++|+++|..... +....+..+++.+... .+
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~-~~~-----~~~~~~lga~~~~-~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILN---FRLIAVTRN-NKH-----TEELLRLGAAYVI-DTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESS-STT-----HHHHHHHTCSEEE-ETTTSCHHHHHHHHTTTSCE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeCC-HHH-----HHHHHhCCCcEEE-eCCcccHHHHHHHHhCCCCC
Confidence 3577777666543332222222245 577766655 322 6788888876544 3222233445555554 58
Q ss_pred CEEEEe
Q 023530 206 DFLVLA 211 (281)
Q Consensus 206 DlIVLA 211 (281)
|+++-+
T Consensus 215 Dvvid~ 220 (340)
T 3gms_A 215 DAAIDS 220 (340)
T ss_dssp EEEEES
T ss_pred cEEEEC
Confidence 888754
No 309
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=27.24 E-value=2e+02 Score=22.65 Aligned_cols=79 Identities=18% Similarity=0.285 Sum_probs=46.9
Q ss_pred eEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh---CCC
Q 023530 130 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ---NTD 206 (281)
Q Consensus 130 rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~---~~D 206 (281)
.|-+..|....-|..++..++.. ...+++..|+......-.-++--++.|+.+..+..|. .+-+.+.++-+ +.|
T Consensus 3 qifvvfssdpeilkeivreikrq--gvrvvllysdqdekrrrerleefekqgvdvrtvedke-dfrenireiwerypqld 79 (162)
T 2l82_A 3 QIFVVFSSDPEILKEIVREIKRQ--GVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKE-DFRENIREIWERYPQLD 79 (162)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCSCHHHHHHHHHHHHTTTCEEEECCSHH-HHHHHHHHHHHHCTTCC
T ss_pred eEEEEecCCHHHHHHHHHHHHhC--CeEEEEEecCchHHHHHHHHHHHHHcCCceeeeccHH-HHHHHHHHHHHhCCCCc
Confidence 45566676778889998887765 3689999998521000112233456789888876332 11123334443 678
Q ss_pred EEEEe
Q 023530 207 FLVLA 211 (281)
Q Consensus 207 lIVLA 211 (281)
.+|..
T Consensus 80 vvviv 84 (162)
T 2l82_A 80 VVVIV 84 (162)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77764
No 310
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=27.01 E-value=48 Score=29.83 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=21.8
Q ss_pred CCCeeEEEEe-eCC-hhHHHHHHHhhhcCCCCeeEEEEEeCC
Q 023530 126 DPKYKVAVLA-SKQ-EHCLVDFLYGWQEGKLPVEITCVISNH 165 (281)
Q Consensus 126 ~~~~rIavl~-Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~ 165 (281)
..++||+|.+ +|+ |.-+-..+.. .. ..++++++...
T Consensus 19 ~~~irV~V~Ga~GrMGr~i~~~v~~--~~--~~eLvg~vd~~ 56 (288)
T 3ijp_A 19 PGSMRLTVVGANGRMGRELITAIQR--RK--DVELCAVLVRK 56 (288)
T ss_dssp --CEEEEESSTTSHHHHHHHHHHHT--CS--SEEEEEEBCCT
T ss_pred cCCeEEEEECCCCHHHHHHHHHHHh--CC--CCEEEEEEecC
Confidence 3567999988 776 5444433332 22 47899988754
No 311
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=26.92 E-value=98 Score=26.64 Aligned_cols=45 Identities=16% Similarity=0.149 Sum_probs=24.2
Q ss_pred CeeEEEEee-CC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCC
Q 023530 128 KYKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (281)
Q Consensus 128 ~~rIavl~S-g~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP 183 (281)
++||+|++. |. |+.+-..+.. .| .+|. +.|+ +....+.+.+.|+.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~--~g---~~V~--~~~r----~~~~~~~~~~~g~~ 57 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHD--SA---HHLA--AIEI----APEGRDRLQGMGIP 57 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH--SS---SEEE--EECC----SHHHHHHHHHTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHh--CC---CEEE--EEEC----CHHHHHHHHhcCCC
Confidence 479999999 87 5554433332 34 3554 4454 11223344446754
No 312
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=26.78 E-value=77 Score=29.34 Aligned_cols=80 Identities=15% Similarity=0.217 Sum_probs=44.0
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCe-eEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhC
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPV-EITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~-eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
..++|+|++.|. |..+-..+.. .| + +| +++|+ ....+.++|+++|.. .++. + .+.+.+.+
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~--~G---~~~V--~v~~r---~~~ra~~la~~~g~~--~~~~-----~-~l~~~l~~ 227 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVD--RG---VRAV--LVANR---TYERAVELARDLGGE--AVRF-----D-ELVDHLAR 227 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHH--HC---CSEE--EEECS---SHHHHHHHHHHHTCE--ECCG-----G-GHHHHHHT
T ss_pred cCCEEEEEChHHHHHHHHHHHHH--CC---CCEE--EEEeC---CHHHHHHHHHHcCCc--eecH-----H-hHHHHhcC
Confidence 346899999976 4333323332 24 3 44 45565 223445788888864 2221 1 23455568
Q ss_pred CCEEEEec--ccccCChhHHhh
Q 023530 205 TDFLVLAR--YMQPVPLQKEAY 224 (281)
Q Consensus 205 ~DlIVLAg--YMrILs~~fl~~ 224 (281)
+|+|+.+- =+.+++...++.
T Consensus 228 aDvVi~at~~~~~~~~~~~l~~ 249 (404)
T 1gpj_A 228 SDVVVSATAAPHPVIHVDDVRE 249 (404)
T ss_dssp CSEEEECCSSSSCCBCHHHHHH
T ss_pred CCEEEEccCCCCceecHHHHHH
Confidence 99999972 123445555554
No 313
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=26.78 E-value=96 Score=27.70 Aligned_cols=56 Identities=18% Similarity=0.181 Sum_probs=35.6
Q ss_pred eeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHH-HHHhCCCCEEEeC
Q 023530 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIR-FLERHGIPYHYLC 188 (281)
Q Consensus 129 ~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~-~A~~~gIP~~~i~ 188 (281)
.|+++..||+- +.+-.++... -| .++.+|..|+...+. ..+.+ .|+++|||+++++
T Consensus 21 ~kvlvalSGGvDSsvla~ll~~~-~g---~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~ 82 (308)
T 2dpl_A 21 SKAIIALSGGVDSSTAAVLAHKA-IG---DRLHAVFVNTGFLRKGEPEFVVKTFRDEFGMNLHYVD 82 (308)
T ss_dssp SCEEEECCSSHHHHHHHHHHHHH-HG---GGEEEEEEECSCCCTTHHHHHHHHHTTTTCCEEEEEE
T ss_pred CCEEEEEeChHHHHHHHHHHHHh-hC---CCEEEEEEcCCCCChHHHHHHHHHHHHHcCCcEEEEE
Confidence 48999999973 4455555432 13 467788777643221 13445 4467999999987
No 314
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=26.74 E-value=1e+02 Score=23.92 Aligned_cols=76 Identities=9% Similarity=0.100 Sum_probs=44.3
Q ss_pred CeeEEEEeeCCh---hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhC
Q 023530 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 128 ~~rIavl~Sg~G---snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
++||.|..+|+. .-.++++.+...+ ..+|.---+. +..++..+.+.++++||+......+.-. + +.+++
T Consensus 3 ~~~VLFVC~gN~cRSpmAEa~~~~~~~~--~~~v~SAGt~-~~~~~p~a~~~l~~~Gid~s~~~ar~l~-~----~~~~~ 74 (131)
T 1jf8_A 3 KKTIYFISTGNSARSQMAEGWGKEILGE--GWNVYSAGIE-THGVNPKAIEAMKEVDIDISNHTSDLID-N----DILKQ 74 (131)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSTT--TEEEEEEESS-CCCCCHHHHHHHHHTTCCCTTCCCCBCC-H----HHHHH
T ss_pred CCEEEEEcCCcchHHHHHHHHHHHhcCC--CEEEEcCcCC-CCCCCHHHHHHHHHcCCCcccCccccCC-h----HHhcc
Confidence 468999999995 4556666664333 3444322222 1125677899999999986332111111 1 12236
Q ss_pred CCEEEEe
Q 023530 205 TDFLVLA 211 (281)
Q Consensus 205 ~DlIVLA 211 (281)
.|+|+..
T Consensus 75 ~D~Ii~m 81 (131)
T 1jf8_A 75 SDLVVTL 81 (131)
T ss_dssp CSEEEEC
T ss_pred CCEEEEc
Confidence 8999885
No 315
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=26.59 E-value=62 Score=25.61 Aligned_cols=40 Identities=20% Similarity=0.318 Sum_probs=25.8
Q ss_pred HHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHHHHHhCCCCEEEeC
Q 023530 145 FLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 145 Ll~~~~~g~l~~eI~~Visn~pd~~~---a~~~~~A~~~gIP~~~i~ 188 (281)
..++++.|. +..+.+-+|-+ |+ ..+..+|++++||++++.
T Consensus 49 v~kal~~gk--aklViiA~D~~--~~~~~~~l~~lc~~~~IP~~~v~ 91 (135)
T 2aif_A 49 ATKALNRGI--AEIVLLAADAE--PLEILLHLPLVCEDKNTPYVFVR 91 (135)
T ss_dssp HHHHHHTTC--EEEEEEETTCS--CHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHcCC--CeEEEEecCCC--hHHHHhHHHHHHHhcCCcEEEEC
Confidence 344445564 56665656643 22 345678999999999876
No 316
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=26.51 E-value=36 Score=31.23 Aligned_cols=21 Identities=24% Similarity=0.181 Sum_probs=15.6
Q ss_pred CCeeEEEEeeCC-hhHHHHHHH
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLY 147 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~ 147 (281)
.++||+|+++|. |+.+-..+.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La 49 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLA 49 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHH
T ss_pred cCCeEEEECccHHHHHHHHHHH
Confidence 357999999998 666655554
No 317
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=26.41 E-value=34 Score=26.05 Aligned_cols=59 Identities=12% Similarity=0.087 Sum_probs=32.5
Q ss_pred EeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEe-CCCCCChHHHHHHHHh
Q 023530 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL-CAKENEREEELLELVQ 203 (281)
Q Consensus 134 l~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i-~~k~~~~e~~l~~~L~ 203 (281)
+++|.-..+ ++++.|. +..+.+-+|-|+.--..+..+|++++||++.+ .++ ++|=.++-
T Consensus 22 l~~G~~~v~----kai~~gk--a~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk-----~eLG~a~G 81 (110)
T 3cpq_A 22 VILGSKRTI----KFVKHGE--GKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITS-----LELGAVCG 81 (110)
T ss_dssp EEESHHHHH----HHHHTTC--CSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCH-----HHHHHHTT
T ss_pred eeeCHHHHH----HHHHcCC--ceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCH-----HHHHHHhC
Confidence 445543444 4444564 55665555542100134667899999998887 321 24556665
No 318
>2ln3_A De novo designed protein OR135; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=26.40 E-value=48 Score=23.59 Aligned_cols=47 Identities=17% Similarity=0.111 Sum_probs=32.5
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHHhhhhcccce-eeeecCCCCCeeEEEEeeCC
Q 023530 87 RSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS-VVRVPDIDPKYKVAVLASKQ 138 (281)
Q Consensus 87 rlev~~p~~~~~~~~L~~~L~~la~~l~l~~~-~~~~~~~~~~~rIavl~Sg~ 138 (281)
.++|+..+ +...++++.+++.+|+.-|+... +| .+.+.||-.-+|-.
T Consensus 30 evefdstd-dkeieeferdmedlakktgvqiqkqw----qgnklrirlkgsle 77 (83)
T 2ln3_A 30 EVEFDSTD-DKEIEEFERDMEDLAKKTGVQIQKQW----QGNKLRIRLKGSLE 77 (83)
T ss_dssp EEEECCCC-HHHHHHHHHHHHHHHHHHTCCEEEEE----ETTEEEEEEESSCC
T ss_pred EEEecCCC-hHHHHHHHhHHHHHHHhhchhHHHHh----cCCeEEEEeccchh
Confidence 45555444 44578899999999999887532 34 47788887766643
No 319
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=26.38 E-value=70 Score=28.24 Aligned_cols=61 Identities=8% Similarity=-0.087 Sum_probs=38.0
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhc-------CCCCeeEEEEEeCCCCCC-ChhHHHHHHhCCC-CEEEeC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQE-------GKLPVEITCVISNHDRGP-NSHVIRFLERHGI-PYHYLC 188 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~-------g~l~~eI~~Visn~pd~~-~a~~~~~A~~~gI-P~~~i~ 188 (281)
.++++|-.||+ +|.+-+.+-+..- |+-..++.+|........ -..+.+.|+..|| +++.++
T Consensus 40 ~~~vvvglSGGvDSsv~a~L~~~a~~~lg~~~~~~~~~v~av~~~~~~~~~~~dA~~va~~lgi~~~~~i~ 110 (275)
T 1wxi_A 40 IKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQPDRVLTVN 110 (275)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSCTTHHHHHHHHHHHCCSEEEECC
T ss_pred CCCEEEECcCcHHHHHHHHHHHHHHHHhccccccccceEEEEEeCCCCccCHHHHHHHHHHcCCCeEEEEe
Confidence 45899999998 4655553332221 111237888877542111 1357888999999 888886
No 320
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=26.16 E-value=1.1e+02 Score=25.92 Aligned_cols=44 Identities=11% Similarity=0.037 Sum_probs=24.1
Q ss_pred eeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCC
Q 023530 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (281)
Q Consensus 129 ~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP 183 (281)
+||+|++.|. |+.+-..+.. .| .+|.+ .++ +..-.+.+.+.|++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~--~g---~~V~~--~~~----~~~~~~~~~~~g~~ 45 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRR--RG---HYLIG--VSR----QQSTCEKAVERQLV 45 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TT---CEEEE--ECS----CHHHHHHHHHTTSC
T ss_pred CEEEEEcCcHHHHHHHHHHHH--CC---CEEEE--EEC----CHHHHHHHHhCCCC
Confidence 4899999887 5544433332 34 35543 343 22234445677775
No 321
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=26.11 E-value=3.6e+02 Score=24.26 Aligned_cols=84 Identities=10% Similarity=0.106 Sum_probs=44.4
Q ss_pred CCCeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCC-CEEEeC-C-CCCCh-H----
Q 023530 126 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGI-PYHYLC-A-KENER-E---- 195 (281)
Q Consensus 126 ~~~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gI-P~~~i~-~-k~~~~-e---- 195 (281)
.+|+||++.+--+. .-+..|+.++++.. ..++..++|-. . . .-..+.-+.+|| |-+.++ - ..... +
T Consensus 23 ~~m~ki~~v~Gtr~~~~~~a~li~~l~~~~-~~~~~~~~tG~-h-~-~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~ 98 (396)
T 3dzc_A 23 NAMKKVLIVFGTRPEAIKMAPLVQQLCQDN-RFVAKVCVTGQ-H-R-EMLDQVLELFSITPDFDLNIMEPGQTLNGVTSK 98 (396)
T ss_dssp -CCEEEEEEECSHHHHHHHHHHHHHHHHCT-TEEEEEEECCS-S-S-HHHHHHHHHTTCCCSEECCCCCTTCCHHHHHHH
T ss_pred CCCCeEEEEEeccHhHHHHHHHHHHHHhCC-CCcEEEEEecc-c-H-HHHHHHHHhcCCCCceeeecCCCCCCHHHHHHH
Confidence 45678766443332 34455666666531 36776666642 1 1 112344578998 444544 1 11111 1
Q ss_pred --HHHHHHHh--CCCEEEEecc
Q 023530 196 --EELLELVQ--NTDFLVLARY 213 (281)
Q Consensus 196 --~~l~~~L~--~~DlIVLAgY 213 (281)
.++.+.++ +||+|++-|.
T Consensus 99 ~~~~l~~~l~~~kPDvVi~~g~ 120 (396)
T 3dzc_A 99 ILLGMQQVLSSEQPDVVLVHGD 120 (396)
T ss_dssp HHHHHHHHHHHHCCSEEEEETT
T ss_pred HHHHHHHHHHhcCCCEEEEECC
Confidence 24556666 8999999774
No 322
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=26.04 E-value=94 Score=23.30 Aligned_cols=39 Identities=23% Similarity=0.355 Sum_probs=24.6
Q ss_pred HHHHHhCCCCE--EEeCCCCCChHHHHHHHHh--CCCEEEEeccc
Q 023530 174 IRFLERHGIPY--HYLCAKENEREEELLELVQ--NTDFLVLARYM 214 (281)
Q Consensus 174 ~~~A~~~gIP~--~~i~~k~~~~e~~l~~~L~--~~DlIVLAgYM 214 (281)
.++++++|++. ..+.. .+..++|.+..+ ++|+||+....
T Consensus 77 ~~~~~~~~~~~~~~~~~~--g~~~~~I~~~a~~~~~dliV~G~~~ 119 (150)
T 3tnj_A 77 SQIGNTLGIDPAHRWLVW--GEPREEIIRIAEQENVDLIVVGSHG 119 (150)
T ss_dssp HHHHHHHTCCGGGEEEEE--SCHHHHHHHHHHHTTCSEEEEEEC-
T ss_pred HHHHHHcCCCcceEEEec--CCHHHHHHHHHHHcCCCEEEEecCC
Confidence 44567778873 22211 234467888777 89999997554
No 323
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=26.02 E-value=47 Score=30.41 Aligned_cols=42 Identities=10% Similarity=0.252 Sum_probs=21.6
Q ss_pred HHHHHHhCC--CCEEEeCCCC-C-ChHHHHHHHHh-CCCEEEEeccc
Q 023530 173 VIRFLERHG--IPYHYLCAKE-N-EREEELLELVQ-NTDFLVLARYM 214 (281)
Q Consensus 173 ~~~~A~~~g--IP~~~i~~k~-~-~~e~~l~~~L~-~~DlIVLAgYM 214 (281)
+.+.++++| +.+.+++... . +.++.+.++++ ++|+|++.||.
T Consensus 50 ~~~~~~~~G~~~~~~~~e~~~~~~d~~~~l~~l~~~g~d~Ii~~g~~ 96 (356)
T 3s99_A 50 RKELVEALGDKVETTFLENVAEGADAERSIKRIARAGNKLIFTTSFG 96 (356)
T ss_dssp HHHHHHHHTTTEEEEEECSCCTTHHHHHHHHHHHHTTCSEEEECSGG
T ss_pred HHHHHHHhCCceEEEEEecCCCHHHHHHHHHHHHHCCCCEEEECCHH
Confidence 344556666 5555554211 1 11223334444 68888887765
No 324
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=25.81 E-value=1.5e+02 Score=24.44 Aligned_cols=70 Identities=9% Similarity=0.085 Sum_probs=0.0
Q ss_pred CCCCHHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCCh---
Q 023530 95 IKWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNS--- 171 (281)
Q Consensus 95 ~~~~~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a--- 171 (281)
...+++++.+.+.+.|+++|++ +.+..++.- .+|++++++-. .+..+||-| |.|
T Consensus 24 G~~Tl~di~~~l~~~a~~~g~~---l~~~QSN~E--------------GeLId~Ih~a~--~~~dgiIIN----pgA~TH 80 (154)
T 1uqr_A 24 GSQTLSDIEQHLQQSAQAQGYE---LDYFQANGE--------------ESLINRIHQAF--QNTDFIIIN----PGAFTH 80 (154)
T ss_dssp TCCCHHHHHHHHHHHHHHTTCE---EEEEECSSH--------------HHHHHHHHHTT--TTCCEEEEE----CTTHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCE---EEEEeeCCH--------------HHHHHHHHHhh--hcCcEEEEC----cchhcc
Q ss_pred ---hHHHHHHhCCCCEEEe
Q 023530 172 ---HVIRFLERHGIPYHYL 187 (281)
Q Consensus 172 ---~~~~~A~~~gIP~~~i 187 (281)
..++-.+..++|+.-+
T Consensus 81 tSvAlrDAl~~v~~P~VEV 99 (154)
T 1uqr_A 81 TSVAIRDALLAVSIPFIEV 99 (154)
T ss_dssp HCHHHHHHHHHHTCCEEEE
T ss_pred chHHHHHHHHhCCCCEEEE
No 325
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=25.79 E-value=94 Score=24.11 Aligned_cols=49 Identities=20% Similarity=0.333 Sum_probs=29.9
Q ss_pred EeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCC-ChhHHHHHHhCCCCEEEeC
Q 023530 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 134 l~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~-~a~~~~~A~~~gIP~~~i~ 188 (281)
+++|.-.. ..+++.|. +..+.+-+|-++.. -.....+|+++|||+.++.
T Consensus 32 lv~G~~~v----~kai~~gk--a~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~ 81 (122)
T 3o85_A 32 IKRGANEA----LKQVNRGK--AELVIIAADADPIEIVLHLPLACEDKGVPYVFIG 81 (122)
T ss_dssp EEESHHHH----HHHHHTTC--CSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEES
T ss_pred EeEcHHHH----HHHHHcCC--ceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEEC
Confidence 44554344 44445564 56776666642111 1356778999999988876
No 326
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=25.77 E-value=3e+02 Score=24.54 Aligned_cols=71 Identities=8% Similarity=0.062 Sum_probs=39.2
Q ss_pred CeeEEEEeeCCh--hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh-C
Q 023530 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-N 204 (281)
Q Consensus 128 ~~rIavl~Sg~G--snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~-~ 204 (281)
..+|+|.+.+++ ...-.+... .| ++|.++. + ++ -+++|+++|....+ +.+..+..+++.++.. +
T Consensus 165 g~~VlV~Ga~G~vG~~a~qla~~--~G---a~Vi~~~-~-~~-----~~~~~~~lGa~~vi-~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 165 PVYVLVYGGSTATATVTMQMLRL--SG---YIPIATC-S-PH-----NFDLAKSRGAEEVF-DYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH--TT---CEEEEEE-C-GG-----GHHHHHHTTCSEEE-ETTSTTHHHHHHHHTTTC
T ss_pred CcEEEEECCCcHHHHHHHHHHHH--CC---CEEEEEe-C-HH-----HHHHHHHcCCcEEE-ECCCchHHHHHHHHccCC
Confidence 356777766443 433333332 34 5777664 3 32 26799999975443 4222233344555544 6
Q ss_pred CCEEEEe
Q 023530 205 TDFLVLA 211 (281)
Q Consensus 205 ~DlIVLA 211 (281)
+|+++=+
T Consensus 232 ~d~v~d~ 238 (371)
T 3gqv_A 232 LRYALDC 238 (371)
T ss_dssp CCEEEES
T ss_pred ccEEEEC
Confidence 8888754
No 327
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=25.77 E-value=71 Score=28.12 Aligned_cols=65 Identities=12% Similarity=0.155 Sum_probs=35.0
Q ss_pred CCCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhC
Q 023530 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 126 ~~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
..++||+|++.|. |..+-.-+.+ .| .+|. +.|+ +....+.+.+.|+. ..+ + +.+++++
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~--~G---~~V~--~~dr----~~~~~~~~~~~g~~--~~~----~----~~e~~~~ 65 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLK--QG---KRVA--IWNR----SPGKAAALVAAGAH--LCE----S----VKAALSA 65 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHH--TT---CCEE--EECS----SHHHHHHHHHHTCE--ECS----S----HHHHHHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHH--CC---CEEE--EEeC----CHHHHHHHHHCCCe--ecC----C----HHHHHhc
Confidence 4467999999988 6554433322 34 3543 4465 22223334444652 111 1 2244557
Q ss_pred CCEEEEe
Q 023530 205 TDFLVLA 211 (281)
Q Consensus 205 ~DlIVLA 211 (281)
+|+|+++
T Consensus 66 aDvVi~~ 72 (306)
T 3l6d_A 66 SPATIFV 72 (306)
T ss_dssp SSEEEEC
T ss_pred CCEEEEE
Confidence 8999987
No 328
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=25.71 E-value=1.6e+02 Score=25.18 Aligned_cols=78 Identities=9% Similarity=0.034 Sum_probs=40.0
Q ss_pred CCeeEEEEee-CC-h-hHHHHHHHhhhcCCCCeeEEEEEeCCC-CCCCh-hH--HHHHHhCCCCEEEeCCCCCChHHHHH
Q 023530 127 PKYKVAVLAS-KQ-E-HCLVDFLYGWQEGKLPVEITCVISNHD-RGPNS-HV--IRFLERHGIPYHYLCAKENEREEELL 199 (281)
Q Consensus 127 ~~~rIavl~S-g~-G-snL~aLl~~~~~g~l~~eI~~Visn~p-d~~~a-~~--~~~A~~~gIP~~~i~~k~~~~e~~l~ 199 (281)
.+++|.|.+. |. | +..+.|++ .| .+|.++ +.++ +..+. .. ++.....++.++..+- .+.+.+.
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~---~g---~~V~~~-~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~---~d~~~l~ 72 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLS---FS---HPTFIY-ARPLTPDSTPSSVQLREEFRSMGVTIIEGEM---EEHEKMV 72 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHH---TT---CCEEEE-ECCCCTTCCHHHHHHHHHHHHTTCEEEECCT---TCHHHHH
T ss_pred cccEEEEEcCCchhHHHHHHHHHh---CC---CcEEEE-ECCcccccChHHHHHHHHhhcCCcEEEEecC---CCHHHHH
Confidence 3567777764 33 4 44455555 34 466644 4332 10011 11 1111346777777651 1234677
Q ss_pred HHHhCCCEEEE-eccc
Q 023530 200 ELVQNTDFLVL-ARYM 214 (281)
Q Consensus 200 ~~L~~~DlIVL-AgYM 214 (281)
++++++|.||. |++.
T Consensus 73 ~a~~~~d~vi~~a~~~ 88 (321)
T 3c1o_A 73 SVLKQVDIVISALPFP 88 (321)
T ss_dssp HHHTTCSEEEECCCGG
T ss_pred HHHcCCCEEEECCCcc
Confidence 78889998875 4544
No 329
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=25.69 E-value=2.1e+02 Score=21.25 Aligned_cols=33 Identities=12% Similarity=0.198 Sum_probs=23.0
Q ss_pred EEEEEeCCCCCCC------hhHHHHHHhCCCCEEEeCCC
Q 023530 158 ITCVISNHDRGPN------SHVIRFLERHGIPYHYLCAK 190 (281)
Q Consensus 158 I~~Visn~pd~~~------a~~~~~A~~~gIP~~~i~~k 190 (281)
...++.|+-|+.+ ..+.++++++++|++.++.+
T Consensus 113 ~iilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~ 151 (170)
T 1r2q_A 113 VIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAK 151 (170)
T ss_dssp EEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEEEECCTT
T ss_pred cEEEEEECccCccccccCHHHHHHHHHHcCCeEEEEeCC
Confidence 4556677766532 24677888999999888844
No 330
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=25.61 E-value=2.4e+02 Score=23.32 Aligned_cols=71 Identities=13% Similarity=0.174 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCCh-hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHH
Q 023530 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (281)
Q Consensus 99 ~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~G-snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A 177 (281)
...+.+.+++.+++.|.+ +.++.+... .....+++.+.+.. +.+||....+ .+....+.+
T Consensus 28 ~~~~~~gi~~~a~~~g~~--------------~~~~~~~~~~~~~~~~~~~~~~~~----vdgiIi~~~~-~~~~~~~~l 88 (292)
T 3k4h_A 28 FPEVIRGISSFAHVEGYA--------------LYMSTGETEEEIFNGVVKMVQGRQ----IGGIILLYSR-ENDRIIQYL 88 (292)
T ss_dssp HHHHHHHHHHHHHHTTCE--------------EEECCCCSHHHHHHHHHHHHHTTC----CCEEEESCCB-TTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCE--------------EEEEeCCCCHHHHHHHHHHHHcCC----CCEEEEeCCC-CChHHHHHH
Confidence 467778888888887753 222223332 22334455444443 3333322111 234678888
Q ss_pred HhCCCCEEEeC
Q 023530 178 ERHGIPYHYLC 188 (281)
Q Consensus 178 ~~~gIP~~~i~ 188 (281)
++.|||+..++
T Consensus 89 ~~~~iPvV~~~ 99 (292)
T 3k4h_A 89 HEQNFPFVLIG 99 (292)
T ss_dssp HHTTCCEEEES
T ss_pred HHCCCCEEEEC
Confidence 99999999987
No 331
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=25.45 E-value=2.4e+02 Score=23.60 Aligned_cols=71 Identities=11% Similarity=0.047 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeC---ChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC--hhH
Q 023530 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASK---QEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN--SHV 173 (281)
Q Consensus 99 ~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg---~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~--a~~ 173 (281)
...+.+.+++.++++|.+ +.+..+. ........++...... +.+||....+ .+ .+.
T Consensus 18 ~~~~~~gi~~~a~~~g~~--------------~~~~~~~~~~~~~~~~~~i~~l~~~~----vdgiii~~~~-~~~~~~~ 78 (297)
T 3rot_A 18 WTSLFQGAKKAAEELKVD--------------LQILAPPGANDVPKQVQFIESALATY----PSGIATTIPS-DTAFSKS 78 (297)
T ss_dssp HHHHHHHHHHHHHHHTCE--------------EEEECCSSSCCHHHHHHHHHHHHHTC----CSEEEECCCC-SSTTHHH
T ss_pred HHHHHHHHHHHHHHhCcE--------------EEEECCCCcCCHHHHHHHHHHHHHcC----CCEEEEeCCC-HHHHHHH
Confidence 467788888888888754 2222222 2222223333322232 2233322111 23 467
Q ss_pred HHHHHhCCCCEEEeC
Q 023530 174 IRFLERHGIPYHYLC 188 (281)
Q Consensus 174 ~~~A~~~gIP~~~i~ 188 (281)
.+.+.+.|||+..++
T Consensus 79 ~~~~~~~giPvV~~~ 93 (297)
T 3rot_A 79 LQRANKLNIPVIAVD 93 (297)
T ss_dssp HHHHHHHTCCEEEES
T ss_pred HHHHHHCCCCEEEEc
Confidence 788899999999987
No 332
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=25.12 E-value=84 Score=27.23 Aligned_cols=57 Identities=7% Similarity=-0.131 Sum_probs=37.8
Q ss_pred eEEEEeeCC--hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHHHHHhCCC----CEEEeC
Q 023530 130 KVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGI----PYHYLC 188 (281)
Q Consensus 130 rIavl~Sg~--GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~~A~~~gI----P~~~i~ 188 (281)
+++|..||+ +..|-.|+...... +.++.+|..|+.-..+ ..+.+.|+++|+ |++++.
T Consensus 43 ~v~va~SGGkDS~vLL~ll~~~~~~--~~~i~vv~iDtg~~~~et~~~v~~~~~~~gl~~~~~l~v~~ 108 (261)
T 2oq2_A 43 HLFQTTAFGLTGLVTIDMLSKLSEK--YYMPELLFIDTLHHFPQTLTLKNEIEKKYYQPKNQTIHVYK 108 (261)
T ss_dssp SEEEECCCCHHHHHHHHHHHHHTTT--SCCCEEEEECCSCBCHHHHHHHHHHHHHHTGGGTCCCEEEC
T ss_pred CEEEEecCCHHHHHHHHHHHHhCcc--CCCeeEEEecCCCCCHHHHHHHHHHHHHhCCCCCCCeEEEe
Confidence 799999986 36677776654321 2356667777632211 356778999999 988876
No 333
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=25.09 E-value=1.6e+02 Score=26.45 Aligned_cols=72 Identities=11% Similarity=0.157 Sum_probs=41.1
Q ss_pred CeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--CC
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NT 205 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~--~~ 205 (281)
++||.|+++|.. . ..++.+.++ +..+++++ +. ++ ++++....|.+ ++.++. .+.+++.++++ ++
T Consensus 7 ~~~ilI~g~g~~-~-~~~~~a~~~--~G~~~v~v-~~-~~-~~~~~~~~ad~----~~~~~~---~d~~~l~~~~~~~~~ 72 (403)
T 4dim_A 7 NKRLLILGAGRG-Q-LGLYKAAKE--LGIHTIAG-TM-PN-AHKPCLNLADE----ISYMDI---SNPDEVEQKVKDLNL 72 (403)
T ss_dssp CCEEEEECCCGG-G-HHHHHHHHH--HTCEEEEE-EC-SS-CCHHHHHHCSE----EEECCT---TCHHHHHHHTTTSCC
T ss_pred CCEEEEECCcHh-H-HHHHHHHHH--CCCEEEEE-cC-CC-CCCcchhhCCe----EEEecC---CCHHHHHHHHHHcCC
Confidence 568998888863 2 234444332 23567666 43 33 36666666543 234441 12356777777 79
Q ss_pred CEEEEecc
Q 023530 206 DFLVLARY 213 (281)
Q Consensus 206 DlIVLAgY 213 (281)
|.|+..|+
T Consensus 73 d~v~~~~~ 80 (403)
T 4dim_A 73 DGAATCCL 80 (403)
T ss_dssp SEEECCSC
T ss_pred CEEEeCCc
Confidence 99886443
No 334
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=24.95 E-value=82 Score=27.92 Aligned_cols=17 Identities=18% Similarity=0.296 Sum_probs=12.5
Q ss_pred CeeEEEEeeCC-hhHHHH
Q 023530 128 KYKVAVLASKQ-EHCLVD 144 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~a 144 (281)
++||+|++.|. |+.+-.
T Consensus 22 ~mkI~iIG~G~mG~ala~ 39 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAK 39 (322)
T ss_dssp CCCEEEESCSHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHH
Confidence 46899999998 655543
No 335
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=24.93 E-value=1.5e+02 Score=24.17 Aligned_cols=55 Identities=4% Similarity=0.025 Sum_probs=31.9
Q ss_pred EEEEeeCChhHHHHHHHhhh----cCCCCeeEEEEEeCCCCCC-ChhHHHHHHhCCCCEEEeC
Q 023530 131 VAVLASKQEHCLVDFLYGWQ----EGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 131 Iavl~Sg~GsnL~aLl~~~~----~g~l~~eI~~Visn~pd~~-~a~~~~~A~~~gIP~~~i~ 188 (281)
++=++..+|.-.+.|.++++ ...+. |.++.|= ..+. ....++.|+++|+|+..++
T Consensus 12 vvGIGcrrg~~~~~i~~ai~~aL~~~gl~--v~~lATi-d~K~dE~gL~e~A~~lgvPl~~~~ 71 (155)
T 3by5_A 12 VAGIGCRKGAASDAIIAAVRAAERAFGVT--VDYLATA-PLKADEAGLAEAAKGLSLSLEIVA 71 (155)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHHTCC--CCEEEES-SCCSCCHHHHHHHHHTTCCEEECC
T ss_pred EEEEccCCCCCHHHHHHHHHHHHHHCCCC--eEEEEch-hhhCCCHHHHHHHHHhCCCeEEEC
Confidence 33355666644444444332 22233 6656553 2222 3467889999999999986
No 336
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=24.85 E-value=2.6e+02 Score=25.35 Aligned_cols=73 Identities=18% Similarity=0.135 Sum_probs=40.1
Q ss_pred CCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--C
Q 023530 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (281)
Q Consensus 127 ~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~--~ 204 (281)
.++||.|+++|. .-..++.++++ +..++..+-++ ++++....|.+ ++.++. .+.+++.+.++ +
T Consensus 18 ~~~~ili~g~g~--~g~~~~~a~~~--~G~~v~~v~~~----~~~~~~~~ad~----~~~~~~---~d~~~l~~~~~~~~ 82 (433)
T 2dwc_A 18 SAQKILLLGSGE--LGKEIAIEAQR--LGVEVVAVDRY----ANAPAMQVAHR----SYVGNM---MDKDFLWSVVEREK 82 (433)
T ss_dssp TCCEEEEESCSH--HHHHHHHHHHH--TTCEEEEEESS----TTCHHHHHSSE----EEESCT---TCHHHHHHHHHHHC
T ss_pred CCCEEEEECCCH--HHHHHHHHHHH--CCCEEEEEECC----CCChhhhhcce----EEECCC---CCHHHHHHHHHHcC
Confidence 356899987763 22344554443 34677766655 34455554432 233331 12346777776 8
Q ss_pred CCEEEEecccc
Q 023530 205 TDFLVLARYMQ 215 (281)
Q Consensus 205 ~DlIVLAgYMr 215 (281)
+|+|+. ++-.
T Consensus 83 ~d~V~~-~~e~ 92 (433)
T 2dwc_A 83 PDAIIP-EIEA 92 (433)
T ss_dssp CSEEEE-CSSC
T ss_pred CCEEEE-Cccc
Confidence 998865 5543
No 337
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=24.83 E-value=1.5e+02 Score=26.52 Aligned_cols=30 Identities=10% Similarity=0.101 Sum_probs=22.0
Q ss_pred eeEEEEEeCCCCCCChh----HHHHHHhCCCCEEEeC
Q 023530 156 VEITCVISNHDRGPNSH----VIRFLERHGIPYHYLC 188 (281)
Q Consensus 156 ~eI~~Visn~pd~~~a~----~~~~A~~~gIP~~~i~ 188 (281)
.+.+.++|-+ +.+| +++.-.+.|||+.++.
T Consensus 65 pDfvI~isPN---~a~PGP~~ARE~l~~~~iP~IvI~ 98 (283)
T 1qv9_A 65 PDFIVYGGPN---PAAPGPSKAREMLADSEYPAVIIG 98 (283)
T ss_dssp CSEEEEECSC---TTSHHHHHHHHHHHTSSSCEEEEE
T ss_pred CCEEEEECCC---CCCCCchHHHHHHHhCCCCEEEEc
Confidence 4688888866 4444 5666667899999997
No 338
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=24.74 E-value=2.3e+02 Score=21.42 Aligned_cols=61 Identities=16% Similarity=0.014 Sum_probs=34.2
Q ss_pred CCCeeEEEEeeCCh-hHHHHHHHh----hhcCCCCeeEEEEE-eCCCCC---CC------------hhHHHHHHhCCCCE
Q 023530 126 DPKYKVAVLASKQE-HCLVDFLYG----WQEGKLPVEITCVI-SNHDRG---PN------------SHVIRFLERHGIPY 184 (281)
Q Consensus 126 ~~~~rIavl~Sg~G-snL~aLl~~----~~~g~l~~eI~~Vi-sn~pd~---~~------------a~~~~~A~~~gIP~ 184 (281)
..++||.++.+++. |.+ |..+ .+...++.+|.++- +...+. -| ....+.|.++|||+
T Consensus 4 ~~~mkIlL~C~aGmSTsl--lv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ipV 81 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQ--LANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQI 81 (108)
T ss_dssp -CCEEEEEEESSSSHHHH--HHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCEE
T ss_pred ccCceEEEECCCCCCHHH--HHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCcE
Confidence 45678888887765 333 3332 22334667776532 211110 01 23567778889999
Q ss_pred EEeC
Q 023530 185 HYLC 188 (281)
Q Consensus 185 ~~i~ 188 (281)
.+++
T Consensus 82 ~vI~ 85 (108)
T 3nbm_A 82 VATR 85 (108)
T ss_dssp EECC
T ss_pred EEeC
Confidence 9998
No 339
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=24.57 E-value=3e+02 Score=23.19 Aligned_cols=73 Identities=15% Similarity=0.157 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCCh-hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHH
Q 023530 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (281)
Q Consensus 99 ~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~G-snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A 177 (281)
..++.+.+++.+++.|.+ +.++.+... ..-..+++.+.+.. .+-..+....++ ...+.++.+
T Consensus 17 ~~~~~~gi~~~a~~~g~~--------------~~~~~~~~~~~~~~~~i~~l~~~~--vdgiIi~~~~~~-~~~~~~~~~ 79 (313)
T 3m9w_A 17 WQKDRDIFVKKAESLGAK--------------VFVQSANGNEETQMSQIENMINRG--VDVLVIIPYNGQ-VLSNVVKEA 79 (313)
T ss_dssp THHHHHHHHHHHHHTSCE--------------EEEEECTTCHHHHHHHHHHHHHTT--CSEEEEECSSTT-SCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCE--------------EEEECCCCCHHHHHHHHHHHHHcC--CCEEEEeCCChh-hhHHHHHHH
Confidence 567888888888888753 223333332 22223333333332 222222232211 113678889
Q ss_pred HhCCCCEEEeC
Q 023530 178 ERHGIPYHYLC 188 (281)
Q Consensus 178 ~~~gIP~~~i~ 188 (281)
.+.|||+..++
T Consensus 80 ~~~~iPvV~~~ 90 (313)
T 3m9w_A 80 KQEGIKVLAYD 90 (313)
T ss_dssp HTTTCEEEEES
T ss_pred HHCCCeEEEEC
Confidence 99999999987
No 340
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=24.53 E-value=3.5e+02 Score=24.01 Aligned_cols=52 Identities=8% Similarity=0.082 Sum_probs=31.7
Q ss_pred CCeeEEEEeeCC-hh--HHHHHHHhhhc-CCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 127 PKYKVAVLASKQ-EH--CLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 127 ~~~rIavl~Sg~-Gs--nL~aLl~~~~~-g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
+|+||+++..+. || -+.+|.++..+ | ++|..+.+.. ..+..+..|++++.++
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~G---h~V~~~~~~~-------~~~~~~~~g~~~~~~~ 66 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVARG---HRVSYAITDE-------FAAQVKAAGATPVVYD 66 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHTT---CEEEEEECGG-------GHHHHHHHTCEEEECC
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHCC---CeEEEEeCHH-------HHHHHHhCCCEEEecC
Confidence 357899987655 43 33445555443 4 5777554432 2456677799888766
No 341
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=24.40 E-value=1.4e+02 Score=25.85 Aligned_cols=43 Identities=14% Similarity=0.113 Sum_probs=26.3
Q ss_pred hHHHHHHhCCCCEEEeCCCCC-ChHHHHHHHHh--CCCEEEEeccc
Q 023530 172 HVIRFLERHGIPYHYLCAKEN-EREEELLELVQ--NTDFLVLARYM 214 (281)
Q Consensus 172 ~~~~~A~~~gIP~~~i~~k~~-~~e~~l~~~L~--~~DlIVLAgYM 214 (281)
.+.+.|+++|..+...+...+ ..+.++++.+. ++|-||+++..
T Consensus 83 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~ 128 (339)
T 3h5o_A 83 GIETVLDAAGYQMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLS 128 (339)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred HHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeCCC
Confidence 456678888888777653221 22334444443 79988888743
No 342
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=24.30 E-value=1.2e+02 Score=25.73 Aligned_cols=20 Identities=20% Similarity=0.061 Sum_probs=13.3
Q ss_pred CeeEEEEeeCC-hhHHHHHHH
Q 023530 128 KYKVAVLASKQ-EHCLVDFLY 147 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~ 147 (281)
|+||+|++.|. |+.+-..+.
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~ 21 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLA 21 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHH
T ss_pred CCeEEEEcccHHHHHHHHHHh
Confidence 46899999998 655544443
No 343
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=24.24 E-value=1.5e+02 Score=27.56 Aligned_cols=56 Identities=20% Similarity=0.198 Sum_probs=37.6
Q ss_pred CeeEEEEeeCC-hh-HHHHHHHhhhcCCCCeeEEEEEeCCCC-CCC---hhHHHHHHhC-----CCCEEEeC
Q 023530 128 KYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDR-GPN---SHVIRFLERH-----GIPYHYLC 188 (281)
Q Consensus 128 ~~rIavl~Sg~-Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd-~~~---a~~~~~A~~~-----gIP~~~i~ 188 (281)
..|++++.||+ +| .+-.++.. .| .++.+|..|+++ ..+ ..+.+.|+.. |||+++++
T Consensus 187 ~~kvlvalSGGvDS~vll~ll~~--~G---~~v~av~v~~~~~~~~~~~~~v~~~a~~l~~~~ggi~~~vv~ 253 (413)
T 2c5s_A 187 GGKVMVLLSGGIDSPVAAYLTMK--RG---VSVEAVHFHSPPFTSERAKQKVIDLAQELTKYCKRVTLHLVP 253 (413)
T ss_dssp TEEEEEECCSSSHHHHHHHHHHH--BT---EEEEEEEEECTTTSCHHHHHHHHHHHHHHGGGSSCEEEEEEE
T ss_pred CCeEEEEeCCCChHHHHHHHHHH--cC---CcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 46899999998 34 44444443 34 688888887631 111 2467778888 89999987
No 344
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=24.02 E-value=1.4e+02 Score=28.20 Aligned_cols=70 Identities=16% Similarity=0.120 Sum_probs=34.6
Q ss_pred CeeEEEEeeCC-hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCC-CCEEEeCCCCCChHHHHHHHHhC
Q 023530 128 KYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHG-IPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 128 ~~rIavl~Sg~-Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~g-IP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
+++|+|+++|. |. ...+|.+ .| ++|. +.++ ....+.+.+++++ +.+..++- .+ .+.+.+++++
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~---~G---~~V~--v~~R---~~~~a~~la~~~~~~~~~~~Dv--~d-~~~l~~~l~~ 68 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTD---SG---IKVT--VACR---TLESAKKLSAGVQHSTPISLDV--ND-DAALDAEVAK 68 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHT---TT---CEEE--EEES---SHHHHHHTTTTCTTEEEEECCT--TC-HHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHh---Cc---CEEE--EEEC---CHHHHHHHHHhcCCceEEEeec--CC-HHHHHHHHcC
Confidence 45788888766 33 2333332 34 4543 3444 1223334444443 33333331 11 2345566678
Q ss_pred CCEEEEe
Q 023530 205 TDFLVLA 211 (281)
Q Consensus 205 ~DlIVLA 211 (281)
+|+||-+
T Consensus 69 ~DvVIn~ 75 (450)
T 1ff9_A 69 HDLVISL 75 (450)
T ss_dssp SSEEEEC
T ss_pred CcEEEEC
Confidence 9988864
No 345
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=23.92 E-value=2.7e+02 Score=22.09 Aligned_cols=30 Identities=17% Similarity=0.226 Sum_probs=16.8
Q ss_pred eEEEEEeCCCCCC----ChhHHHHHHhCCCCEEE
Q 023530 157 EITCVISNHDRGP----NSHVIRFLERHGIPYHY 186 (281)
Q Consensus 157 eI~~Visn~pd~~----~a~~~~~A~~~gIP~~~ 186 (281)
+.+.+|+-.|.-- .-.+..++++++|.+.+
T Consensus 123 ~l~i~itgvpeqvrkelakeaerl~~efni~v~y 156 (170)
T 4hhu_A 123 RLVIVITGVPEQVRKELAKEAERLKAEFNINVQY 156 (170)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHHHHHHhcceEEEE
Confidence 5677788763100 01245567778887654
No 346
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=23.89 E-value=3.5e+02 Score=23.45 Aligned_cols=72 Identities=10% Similarity=0.027 Sum_probs=38.9
Q ss_pred CeeEEEEe-eCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh--
Q 023530 128 KYKVAVLA-SKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (281)
Q Consensus 128 ~~rIavl~-Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~-- 203 (281)
..+|.|.+ +|. |...-.++.+ .| ++|.++..+. .-+++|+++|..... +....+..+++.+...
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~--~G---a~Vi~~~~~~------~~~~~~~~~Ga~~~~-~~~~~~~~~~~~~~~~~~ 208 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKA--LG---AKLIGTVSSP------EKAAHAKALGAWETI-DYSHEDVAKRVLELTDGK 208 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHH--HT---CEEEEEESSH------HHHHHHHHHTCSEEE-ETTTSCHHHHHHHHTTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH--CC---CEEEEEeCCH------HHHHHHHHcCCCEEE-eCCCccHHHHHHHHhCCC
Confidence 45677766 333 3433334433 35 5776665542 236788888865443 3222233445555555
Q ss_pred CCCEEEEe
Q 023530 204 NTDFLVLA 211 (281)
Q Consensus 204 ~~DlIVLA 211 (281)
.+|+++-+
T Consensus 209 g~Dvvid~ 216 (325)
T 3jyn_A 209 KCPVVYDG 216 (325)
T ss_dssp CEEEEEES
T ss_pred CceEEEEC
Confidence 58888754
No 347
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=23.69 E-value=1.2e+02 Score=26.76 Aligned_cols=17 Identities=6% Similarity=0.182 Sum_probs=11.6
Q ss_pred hHHHHHHhCCCCEEEeC
Q 023530 172 HVIRFLERHGIPYHYLC 188 (281)
Q Consensus 172 ~~~~~A~~~gIP~~~i~ 188 (281)
.+.+.+++.+|++..+.
T Consensus 219 ~l~~~ik~~~v~~if~e 235 (286)
T 3gi1_A 219 EIQDFVKEYNVKTIFAE 235 (286)
T ss_dssp HHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHcCCCEEEEe
Confidence 35666777777777765
No 348
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=23.66 E-value=1.8e+02 Score=23.45 Aligned_cols=45 Identities=13% Similarity=0.039 Sum_probs=24.2
Q ss_pred HHHHHHHHhCCCEEEE-ecccccCChhHHhhh----cCCcee-ccCCCCCC
Q 023530 195 EEELLELVQNTDFLVL-ARYMQPVPLQKEAYL----GYKLLE-SLSSKGSL 239 (281)
Q Consensus 195 e~~l~~~L~~~DlIVL-AgYMrILs~~fl~~~----~~riIN-SLLP~f~G 239 (281)
++.+.+.++++|.||. ||...+-...+++.. .+++|| |=.-.|.+
T Consensus 64 ~~~~~~~~~~~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~~~~ 114 (221)
T 3r6d_A 64 PGXLEQAVTNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGE 114 (221)
T ss_dssp HHHHHHHHTTCSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEEETTTTSC
T ss_pred HHHHHHHHcCCCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEeeceecCC
Confidence 4467777789998884 454211122333322 257999 43444443
No 349
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=23.60 E-value=2.1e+02 Score=28.58 Aligned_cols=91 Identities=11% Similarity=0.108 Sum_probs=48.7
Q ss_pred CCCCeeEEEEeeCCh-----hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHH
Q 023530 125 IDPKYKVAVLASKQE-----HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELL 199 (281)
Q Consensus 125 ~~~~~rIavl~Sg~G-----snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~ 199 (281)
.+++.||+++.+.-. +.+..+++..... ..||.+--.+ ++. ......+.+..---++-+. . -+.++++.
T Consensus 234 ~~~klrIGyvS~df~~H~v~~~~~~~~~~~d~~--~fei~~y~~~-~~~-~~~~~~~~~~~~~~~~~~~-~-~~~d~~~a 307 (723)
T 4gyw_A 234 SDGRLRVGYVSSDFGNHPTSHLMQSIPGMHNPD--KFEVFCYALS-PDD-GTNFRVKVMAEANHFIDLS-Q-IPCNGKAA 307 (723)
T ss_dssp TTTCEEEEEEESCSSSSHHHHHHTTHHHHSCTT--TEEEEEEESS-CCC-SCHHHHHHHHHSSEEEEGG-G-CCCHHHHH
T ss_pred ccccceeeeechhhccCcHHHHHHHHHHHhccC--ceeEEEEEcC-CCC-ccHHHHHHHHhhccccccc-c-CCcHHHHH
Confidence 456789998877552 4455555554333 4788755444 331 2223333333211122222 1 11245677
Q ss_pred HHHh--CCCEEE-EecccccCChhH
Q 023530 200 ELVQ--NTDFLV-LARYMQPVPLQK 221 (281)
Q Consensus 200 ~~L~--~~DlIV-LAgYMrILs~~f 221 (281)
+.++ ++|++| |.|||.--...+
T Consensus 308 ~~i~~d~iDIlidl~g~t~~~r~~i 332 (723)
T 4gyw_A 308 DRIHQDGIHILVNMNGYTKGARNEL 332 (723)
T ss_dssp HHHHHTTCSEEEESCSSBTTCCTHH
T ss_pred HHHHhccceeEEeccCCCCCCcchh
Confidence 7777 899877 899997644443
No 350
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=23.50 E-value=85 Score=27.14 Aligned_cols=43 Identities=0% Similarity=0.008 Sum_probs=25.6
Q ss_pred hHHHHHHhCCCCEEEeCCCCC-ChHHHHHHHH-h-CCCEEEEeccc
Q 023530 172 HVIRFLERHGIPYHYLCAKEN-EREEELLELV-Q-NTDFLVLARYM 214 (281)
Q Consensus 172 ~~~~~A~~~gIP~~~i~~k~~-~~e~~l~~~L-~-~~DlIVLAgYM 214 (281)
.+.+.++++|+.+.+++.... ..+++.++.+ + ++|.|++.++.
T Consensus 28 gi~~~~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~~vdgIi~~~~~ 73 (296)
T 2hqb_A 28 GLLNIHSNLDVDVVLEEGVNSEQKAHRRIKELVDGGVNLIFGHGHA 73 (296)
T ss_dssp HHHHHHHHSCCEEEEECCCCSHHHHHHHHHHHHHTTCCEEEECSTH
T ss_pred HHHHHHHHhCCeEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEcCHh
Confidence 345567888888776652221 1223344434 4 79999998764
No 351
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=23.35 E-value=1.4e+02 Score=27.20 Aligned_cols=66 Identities=20% Similarity=0.240 Sum_probs=34.8
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~D 206 (281)
++||+|++.|. |.++-.-+.. .| .+|. +.|+ +....+.+.+.|+... .+ -+++.+..+++|
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~--~G---~~V~--v~dr----~~~~~~~l~~~g~~~~------~s-~~e~~~~a~~~D 83 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRK--GG---HECV--VYDL----NVNAVQALEREGIAGA------RS-IEEFCAKLVKPR 83 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECS----CHHHHHHHHTTTCBCC------SS-HHHHHHHSCSSC
T ss_pred CCEEEEECchHHHHHHHHHHHh--CC---CEEE--EEeC----CHHHHHHHHHCCCEEe------CC-HHHHHhcCCCCC
Confidence 47999999998 6665443332 34 3543 4464 2223344455565321 11 123333333569
Q ss_pred EEEEe
Q 023530 207 FLVLA 211 (281)
Q Consensus 207 lIVLA 211 (281)
+|+++
T Consensus 84 vVi~~ 88 (358)
T 4e21_A 84 VVWLM 88 (358)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99987
No 352
>1b0z_A Protein (phosphoglucose isomerase); autocrinefactor, neuroleukin, crystallography motility; 2.30A {Geobacillus stearothermophilus} SCOP: c.80.1.2 PDB: 1c7q_A* 1c7r_A* 2pgi_A
Probab=23.35 E-value=69 Score=30.62 Aligned_cols=55 Identities=11% Similarity=0.058 Sum_probs=35.0
Q ss_pred eEEEEeeCChhHHHHHHHh------hh--cCC--CCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 130 KVAVLASKQEHCLVDFLYG------WQ--EGK--LPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 130 rIavl~Sg~GsnL~aLl~~------~~--~g~--l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
-+.|.+|++|+..+-+..+ .. .|. ....+++| |++ ...+..+.|+++||+++.++
T Consensus 132 TlviviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~~~vav-T~~---~~g~L~~~a~~~Gi~~F~~~ 196 (445)
T 1b0z_A 132 LSINVISKSGTTTEPAIAFRIFRDYMEKKYGKEEARKRIYVT-TDR---TKGALKKLADQEGYETFVIP 196 (445)
T ss_dssp EEEEEECSSSCCHHHHHHHHHHHHHHHHHHCHHHHGGGEEEE-ECS---SCSHHHHHHHHHTCEEEECC
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHHHHHHhcCchhhcCEEEEE-ecC---CcchhHHHHHHhCCeEEecc
Confidence 5788999999655544221 11 131 11356655 553 34578889999999988886
No 353
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=23.32 E-value=1.4e+02 Score=26.05 Aligned_cols=44 Identities=9% Similarity=0.215 Sum_probs=25.7
Q ss_pred eeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEE
Q 023530 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 185 (281)
Q Consensus 129 ~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~ 185 (281)
+||+|++.|. |+.+-..+.+ .| .+|.++ ++ .+ .+..++.|+.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~--~g---~~V~~~--~r---~~---~~~i~~~g~~~~ 47 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR--SG---EDVHFL--LR---RD---YEAIAGNGLKVF 47 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH--TS---CCEEEE--CS---TT---HHHHHHTCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHH--CC---CeEEEE--Ec---Cc---HHHHHhCCCEEE
Confidence 6899999999 5655555543 34 356543 23 11 255567776544
No 354
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=23.26 E-value=2.3e+02 Score=26.50 Aligned_cols=76 Identities=13% Similarity=0.071 Sum_probs=44.3
Q ss_pred CChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHH----HHHHhCCCCEEEeCCCCCChHHHHHHHHh--CCCEEEE
Q 023530 137 KQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVI----RFLERHGIPYHYLCAKENEREEELLELVQ--NTDFLVL 210 (281)
Q Consensus 137 g~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~----~~A~~~gIP~~~i~~k~~~~e~~l~~~L~--~~DlIVL 210 (281)
|.|+.+.-|..+.+.|. .+..+++ +.+|...+. ..-.+.|||+.++.. ...-.+++ ++|.|++
T Consensus 194 g~gTal~~l~~A~~~gk---~~~V~v~--EtRP~~qGarltA~eL~~~GIpvtlI~D------sa~~~~M~~~~Vd~ViV 262 (383)
T 2a0u_A 194 RYGTALGVVRQLFYDGK---LERVYAC--ETRPWNQGARLTVYECVQEDIPCTLICD------GAASSLMLNRKIDAVVV 262 (383)
T ss_dssp SSCSHHHHHHHHHHTTC---EEEEEEE--CCTTTTHHHHTHHHHHHHTTCCEEEECG------GGHHHHHHHSCCCEEEE
T ss_pred CCchHHHHHHHHHHcCC---eEEEEEe--CCCCccchHHHHHHHHHHcCCCEEEEeh------hHHHHHhhcCCCCEEEE
Confidence 34677776667777764 3332232 344544332 223567999999872 13445555 5888887
Q ss_pred ecccccCChhHHhhhcCCcee
Q 023530 211 ARYMQPVPLQKEAYLGYKLLE 231 (281)
Q Consensus 211 AgYMrILs~~fl~~~~~riIN 231 (281)
|-=+|.. .|.++|
T Consensus 263 -GAD~V~a-------NG~v~N 275 (383)
T 2a0u_A 263 -GADRICQ-------NGDTAN 275 (383)
T ss_dssp -CCSEECT-------TCCEEE
T ss_pred -CccEEec-------CCCEee
Confidence 6666653 245666
No 355
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=23.24 E-value=3.3e+02 Score=22.71 Aligned_cols=71 Identities=10% Similarity=0.022 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHH
Q 023530 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE 178 (281)
Q Consensus 99 ~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~ 178 (281)
..++.+.+++.+++.|.+ +.++.+.....-...++.+.+. .+-+||....+ .+...++.++
T Consensus 26 ~~~~~~gi~~~a~~~g~~--------------~~~~~~~~~~~~~~~~~~l~~~----~vdgiIi~~~~-~~~~~~~~~~ 86 (289)
T 3k9c_A 26 HGDLVEQIYAAATRRGYD--------------VMLSAVAPSRAEKVAVQALMRE----RCEAAILLGTR-FDTDELGALA 86 (289)
T ss_dssp HHHHHHHHHHHHHHTTCE--------------EEEEEEBTTBCHHHHHHHHTTT----TEEEEEEETCC-CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCE--------------EEEEeCCCCHHHHHHHHHHHhC----CCCEEEEECCC-CCHHHHHHHH
Confidence 567788888888887753 2333333322133344443333 24444433222 2345666666
Q ss_pred hCCCCEEEeCC
Q 023530 179 RHGIPYHYLCA 189 (281)
Q Consensus 179 ~~gIP~~~i~~ 189 (281)
+ |||+..++.
T Consensus 87 ~-~iPvV~i~~ 96 (289)
T 3k9c_A 87 D-RVPALVVAR 96 (289)
T ss_dssp T-TSCEEEESS
T ss_pred c-CCCEEEEcC
Confidence 6 999999983
No 356
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=23.16 E-value=2e+02 Score=25.62 Aligned_cols=72 Identities=15% Similarity=0.042 Sum_probs=38.7
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCe-eEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CC-CCChHHHHHHHHh
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPV-EITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AK-ENEREEELLELVQ 203 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~-eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k-~~~~e~~l~~~L~ 203 (281)
-.+|+|+++|. |...-.+..+ .| + +|.++-++ ++ -+++|+++|.... ++ .. ..+..+++.++-.
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~--~G---a~~Vi~~~~~-~~-----~~~~a~~lGa~~v-i~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKA--AG---ASRIIGVGTH-KD-----KFPKAIELGATEC-LNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--HT---CSEEEEECSC-GG-----GHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH--cC---CCeEEEECCC-HH-----HHHHHHHcCCcEE-EecccccchHHHHHHHHhC
Confidence 35899988654 3444444443 34 4 56555444 22 3678999998644 44 21 1122333444333
Q ss_pred -CCCEEEEe
Q 023530 204 -NTDFLVLA 211 (281)
Q Consensus 204 -~~DlIVLA 211 (281)
.+|+|+=+
T Consensus 260 gg~Dvvid~ 268 (373)
T 1p0f_A 260 GGVDYAVEC 268 (373)
T ss_dssp SCBSEEEEC
T ss_pred CCCCEEEEC
Confidence 57888764
No 357
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=23.12 E-value=2.9e+02 Score=24.17 Aligned_cols=75 Identities=15% Similarity=0.277 Sum_probs=40.8
Q ss_pred CeeEEEEeeCCh-hH-HHHHHHhhhcCCCCeeEEEEEeCCCCCCC-hhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhC
Q 023530 128 KYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNHDRGPN-SHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 128 ~~rIavl~Sg~G-sn-L~aLl~~~~~g~l~~eI~~Visn~pd~~~-a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
.++|.|+..|.+ .+ ...++++.... .++..|..... +. ..+.+++++.. .+.+.+.. +.+.+++..
T Consensus 157 ~~~ILv~~GG~d~~~l~~~vl~~L~~~---~~i~vv~G~~~--~~~~~l~~~~~~~~-~v~v~~~~-----~~m~~~m~~ 225 (282)
T 3hbm_A 157 KYDFFICMGGTDIKNLSLQIASELPKT---KIISIATSSSN--PNLKKLQKFAKLHN-NIRLFIDH-----ENIAKLMNE 225 (282)
T ss_dssp CEEEEEECCSCCTTCHHHHHHHHSCTT---SCEEEEECTTC--TTHHHHHHHHHTCS-SEEEEESC-----SCHHHHHHT
T ss_pred CCeEEEEECCCchhhHHHHHHHHhhcC---CCEEEEECCCc--hHHHHHHHHHhhCC-CEEEEeCH-----HHHHHHHHH
Confidence 567777666664 33 34566665432 24554544321 22 22344555443 45554411 137788889
Q ss_pred CCEEEEecc
Q 023530 205 TDFLVLARY 213 (281)
Q Consensus 205 ~DlIVLAgY 213 (281)
+|++|.+|=
T Consensus 226 aDlvI~~gG 234 (282)
T 3hbm_A 226 SNKLIISAS 234 (282)
T ss_dssp EEEEEEESS
T ss_pred CCEEEECCc
Confidence 999999873
No 358
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=23.04 E-value=2.5e+02 Score=21.23 Aligned_cols=80 Identities=13% Similarity=0.138 Sum_probs=50.8
Q ss_pred eEEEEEEEEeCCCCCCHHH---HHHHHHHHhhhhcccce---eeeecCCCCCeeEEEEeeCChhHHHHHHHhhhc-CCCC
Q 023530 83 VFYSRSEFIFDPIKWPREQ---MDEDFFKLSKMFNAMRS---VVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQE-GKLP 155 (281)
Q Consensus 83 ~F~mrlev~~p~~~~~~~~---L~~~L~~la~~l~l~~~---~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~-g~l~ 155 (281)
.|..++.+.+|. +.+.++ ++..-.+.+.+++-... .|++ .++..+|+||--.+-.-|.++|...-- +.+.
T Consensus 2 lFlV~m~V~~P~-~~~~~~~~~~~a~Eka~a~eLq~~G~~~~lWRv--~G~y~nisIfdv~s~~eLh~iL~~LPLfpym~ 78 (96)
T 1mli_A 2 LFHVKMTVKLPV-DMDPAKATQLKADEKELAQRLQREGTWRHLWRI--AGHYANYSVFDVPSVEALHDTLMQLPLFPYMD 78 (96)
T ss_pred eEEEEEEeeCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeEEEEEe--cCCccEEEEEEcCCHHHHHHHHHhCCCCceEE
Confidence 488899999997 777554 44455566666654332 4666 577778999988777778888775211 2223
Q ss_pred eeEEEEEeCCC
Q 023530 156 VEITCVISNHD 166 (281)
Q Consensus 156 ~eI~~Visn~p 166 (281)
.+|. -++.||
T Consensus 79 i~Vt-pL~~HP 88 (96)
T 1mli_A 79 IEVD-GLCRHP 88 (96)
T ss_pred EEEE-EcccCC
Confidence 4444 345574
No 359
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=23.02 E-value=92 Score=22.03 Aligned_cols=67 Identities=13% Similarity=0.102 Sum_probs=38.2
Q ss_pred HHHHHHHHHhCCCeEeEeeeeccCCCCeE--EEEEEEEeCCCCCCHHHHHHHHHHHhhhhcccceeeeecCCCCC
Q 023530 56 VAKLSECIASRGGNILAADVFVPEKKNVF--YSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPK 128 (281)
Q Consensus 56 Va~VS~~La~~giNI~dl~q~~~~~~g~F--~mrlev~~p~~~~~~~~L~~~L~~la~~l~l~~~~~~~~~~~~~ 128 (281)
=.++-+++.+.|..|.++.--.++.+|.- +.-+++. +.++-+.+++.+.....++.+.+++..+.++
T Consensus 15 e~~l~~~F~~~G~~v~~v~i~~d~~t~~~rg~aFV~F~------~~~~A~~Ai~~~~~~~~~~gr~i~V~~a~~~ 83 (91)
T 2lxi_A 15 EDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFS------HLQDATRWMEANQHSLNILGQKVSMHYSDPK 83 (91)
T ss_dssp HHHHHHHHHHHTCCCSBCCSSSCSSSCCCSSEEEEECS------SHHHHHHHHHTTTTEEEETTEEEEEECCCSC
T ss_pred HHHHHHHHHHhCCEeEEEEEEecCCCCCcCceEEEEec------CHHHHHHHHHhcCCCeEECCEEEEEEEcCCC
Confidence 46788899999988888765444333321 2234443 4566677776654443344445555554433
No 360
>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} SCOP: d.58.10.1
Probab=22.93 E-value=44 Score=24.96 Aligned_cols=55 Identities=9% Similarity=-0.057 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCChhHHHHHHHhhhc-CCCCeeEE
Q 023530 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQE-GKLPVEIT 159 (281)
Q Consensus 101 ~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~GsnL~aLl~~~~~-g~l~~eI~ 159 (281)
-+|.-...+|.++|+..|..+..+ - +|-+.+.|....++++++.++. |.-.+.|.
T Consensus 21 GFR~~v~~~A~~lgL~G~V~N~~d--G--~Vei~~eG~~~~l~~f~~~l~~~gP~~a~V~ 76 (98)
T 1aps_A 21 CFRMYAEDEARKIGVVGWVKNTSK--G--TVTGQVQGPEEKVNSMKSWLSKVGSPSSRID 76 (98)
T ss_dssp CCTTHHHHHHHHHTCEEEEECCTT--C--EEEEEEEEEHHHHHHHHHSSSSCCCSSSCCC
T ss_pred CHHHHHHHHHHHcCCeEEEEECCC--C--cEEEEEEeCHHHHHHHHHHHhhcCCCceEEE
Confidence 357778889999999998543322 2 7888999988889999998874 53234443
No 361
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=22.86 E-value=1.4e+02 Score=28.27 Aligned_cols=67 Identities=16% Similarity=0.182 Sum_probs=35.1
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHH-h---CCCCEEEeCCCCCChHHHHHHHH
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE-R---HGIPYHYLCAKENEREEELLELV 202 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~-~---~gIP~~~i~~k~~~~e~~l~~~L 202 (281)
++||+|++.|. |+++-..+.. .| .+|. +.|+ ....+.+.++ + .|+. ... + -+++.+.+
T Consensus 2 ~m~IgvIG~G~mG~~lA~~La~--~G---~~V~--v~dr---~~~~~~~l~~~~~~g~gi~--~~~----~-~~e~v~~l 64 (482)
T 2pgd_A 2 QADIALIGLAVMGQNLILNMND--HG---FVVC--AFNR---TVSKVDDFLANEAKGTKVL--GAH----S-LEEMVSKL 64 (482)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH--TT---CCEE--EECS---STHHHHHHHHTTTTTSSCE--ECS----S-HHHHHHHB
T ss_pred CCeEEEEChHHHHHHHHHHHHH--CC---CeEE--EEeC---CHHHHHHHHhccccCCCeE--EeC----C-HHHHHhhc
Confidence 36899999998 6766554443 34 3543 4454 2233444444 2 3432 111 1 12333434
Q ss_pred hCCCEEEEe
Q 023530 203 QNTDFLVLA 211 (281)
Q Consensus 203 ~~~DlIVLA 211 (281)
+++|+|+++
T Consensus 65 ~~aDvVila 73 (482)
T 2pgd_A 65 KKPRRIILL 73 (482)
T ss_dssp CSSCEEEEC
T ss_pred cCCCEEEEe
Confidence 478888886
No 362
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=22.81 E-value=3.2e+02 Score=23.96 Aligned_cols=75 Identities=7% Similarity=0.125 Sum_probs=37.8
Q ss_pred EEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHH---hCCCCEEEeCCCCCChHHHHHHHHhCCC
Q 023530 131 VAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE---RHGIPYHYLCAKENEREEELLELVQNTD 206 (281)
Q Consensus 131 Iavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~---~~gIP~~~i~~k~~~~e~~l~~~L~~~D 206 (281)
-.||.-++ ++.+.-|..+.+.|. .+..++++ .+|...++..|. +.|||+..+.. ...-..++++|
T Consensus 111 ~~IlT~~~s~Tv~~~l~~a~~~~~---~~~V~v~e--trP~~qG~~~a~~L~~~gI~vtli~d------sa~~~~m~~vd 179 (276)
T 1vb5_A 111 DVIITHSFSSTVLEIIRTAKERKK---RFKVILTE--SSPDYEGLHLARELEFSGIEFEVITD------AQMGLFCREAS 179 (276)
T ss_dssp EEEECCSCCHHHHHHHHHHHHTTC---CEEEEEEC--CTTTTHHHHHHHHHHHTTCCEEEECG------GGHHHHHTTCS
T ss_pred CEEEEeCCChHHHHHHHHHHHcCC---eEEEEEeC--CCcchhhHHHHHHHHHCCCCEEEEcH------HHHHHHHccCC
Confidence 45664334 455544434434453 34444434 224433333332 26999999871 12223445788
Q ss_pred EEEEecccccC
Q 023530 207 FLVLARYMQPV 217 (281)
Q Consensus 207 lIVLAgYMrIL 217 (281)
.+++ |--+|.
T Consensus 180 ~viv-GAd~i~ 189 (276)
T 1vb5_A 180 IAIV-GADMIT 189 (276)
T ss_dssp EEEE-CCSEEC
T ss_pred EEEE-cccEEe
Confidence 7777 555554
No 363
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=22.75 E-value=1.7e+02 Score=23.39 Aligned_cols=57 Identities=14% Similarity=0.127 Sum_probs=32.1
Q ss_pred EEEEeeCChhHHHHHHHhhh----cCCC-CeeEEEEEeCCCCCC-ChhHHHHHHhCCCCEEEeC
Q 023530 131 VAVLASKQEHCLVDFLYGWQ----EGKL-PVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 131 Iavl~Sg~GsnL~aLl~~~~----~g~l-~~eI~~Visn~pd~~-~a~~~~~A~~~gIP~~~i~ 188 (281)
++=++..+|.-.+.|.++++ ...+ ...|.++.|= ..+. ....++.|+++|+|+..++
T Consensus 13 vvGIGcrrg~~~~~i~~ai~~aL~~~~l~~~~v~~lati-d~K~dE~gL~~~A~~lg~pl~~~~ 75 (145)
T 2w6k_A 13 IAGIGCRRGCSAEHLRALLERTLGEHGRSLAELDALASI-DGKRDEPGLRQLATLLERPVHFLA 75 (145)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEE-CSSSCCHHHHHHHHHHTSCEEEEC
T ss_pred EEEEeeCCCCCHHHHHHHHHHHHHHcCCCHHHcceEech-HHhCCCHHHHHHHHHhCCCcEEeC
Confidence 33355666644444443332 2223 2345555552 1112 3467899999999999986
No 364
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=22.72 E-value=2e+02 Score=27.95 Aligned_cols=60 Identities=13% Similarity=0.102 Sum_probs=38.8
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHHHHHhCCCCEEEeC
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~~A~~~gIP~~~i~ 188 (281)
...|++|..||+ +|.+-+.+-.-+-| +.+|.+|.-+.+.... ..+.+.|+..||+++.++
T Consensus 325 g~~~vvvglSGGvDSsv~a~la~~alG--~~~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i~ 388 (590)
T 3n05_A 325 GFRSVLIGLSGGIDSALVAAIACDALG--AQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVS 388 (590)
T ss_dssp TCCCEEEECCSSHHHHHHHHHHHHHHC--GGGEEEEECCCSSCCHHHHHHHHHHHHHHTCEEEECC
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHhC--cccEEEEEECCCCCCHHHHHHHHHHHHHcCCcEEEEE
Confidence 346899999998 46555443321224 1367777765422111 257889999999999987
No 365
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=22.57 E-value=1.2e+02 Score=23.52 Aligned_cols=43 Identities=14% Similarity=0.281 Sum_probs=28.3
Q ss_pred HHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHHHHHhCCCCEEEeCCC
Q 023530 144 DFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLCAK 190 (281)
Q Consensus 144 aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~~A~~~gIP~~~i~~k 190 (281)
....+++.|. +..+.+-.|- + |. ..+..+|+++|||+++++.+
T Consensus 32 ~v~kaI~~gk--a~LVvIA~D~-~-p~~i~~~l~~lC~~~~VP~~~v~sk 77 (113)
T 3jyw_G 32 HVVALIENKK--AKLVLIANDV-D-PIELVVFLPALCKKMGVPYAIVKGK 77 (113)
T ss_dssp HHHHTTTTTC--CSEEEECSCC-S-SHHHHTTHHHHHHHTTCCCEECSCS
T ss_pred HHHHHHHcCC--ceEEEEeCCC-C-HHHHHHHHHHHHHHcCCCEEEECCH
Confidence 3455566674 6677565553 2 22 23567899999999998743
No 366
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=22.57 E-value=1.2e+02 Score=26.36 Aligned_cols=63 Identities=17% Similarity=0.170 Sum_probs=32.7
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCCC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~D 206 (281)
++||+|++.|. |+.+-..+.. .| .+|. +.|+ ..... +...+.|+. ... + ..+.++++|
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~--~g---~~V~--~~~~---~~~~~-~~~~~~g~~--~~~----~----~~~~~~~~D 88 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLK--MG---HTVT--VWNR---TAEKC-DLFIQEGAR--LGR----T----PAEVVSTCD 88 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH--TT---CCEE--EECS---SGGGG-HHHHHTTCE--ECS----C----HHHHHHHCS
T ss_pred CCeEEEEcccHHHHHHHHHHHh--CC---CEEE--EEeC---CHHHH-HHHHHcCCE--EcC----C----HHHHHhcCC
Confidence 47899999988 5555443332 34 3553 3454 11222 333445652 111 1 113345788
Q ss_pred EEEEe
Q 023530 207 FLVLA 211 (281)
Q Consensus 207 lIVLA 211 (281)
+|++|
T Consensus 89 vVi~a 93 (316)
T 2uyy_A 89 ITFAC 93 (316)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 88887
No 367
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=22.56 E-value=2.1e+02 Score=25.54 Aligned_cols=72 Identities=14% Similarity=0.052 Sum_probs=38.4
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCe-eEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CC-CCChHHHHHHHHh
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPV-EITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AK-ENEREEELLELVQ 203 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~-eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k-~~~~e~~l~~~L~ 203 (281)
-.+|+|.++|. |...-.++.+ .| + +|.++..+ ++ -+++|+++|.... ++ .. ..+..+++.+.-.
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~--~G---a~~Vi~~~~~-~~-----~~~~a~~lGa~~v-i~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKI--AG---ASRIIAIDIN-GE-----KFPKAKALGATDC-LNPRELDKPVQDVITELTA 263 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TT---CSEEEEECSC-GG-----GHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHH--cC---CCeEEEEcCC-HH-----HHHHHHHhCCcEE-EccccccchHHHHHHHHhC
Confidence 35788888653 3433334443 34 4 56555444 22 2678999998643 44 21 1122334444433
Q ss_pred -CCCEEEEe
Q 023530 204 -NTDFLVLA 211 (281)
Q Consensus 204 -~~DlIVLA 211 (281)
.+|+|+=+
T Consensus 264 ~g~Dvvid~ 272 (376)
T 1e3i_A 264 GGVDYSLDC 272 (376)
T ss_dssp SCBSEEEES
T ss_pred CCccEEEEC
Confidence 68887754
No 368
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=22.27 E-value=3.3e+02 Score=22.44 Aligned_cols=73 Identities=14% Similarity=0.083 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhhhhcccceeeeecCCCCCeeEEEEeeCCh-hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHH
Q 023530 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (281)
Q Consensus 99 ~~~L~~~L~~la~~l~l~~~~~~~~~~~~~~rIavl~Sg~G-snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A 177 (281)
...+.+.+++.+++.|.+ +.++-+... ......++.+.+....+ ..+....++ ...+.++.+
T Consensus 23 ~~~~~~gi~~~a~~~g~~--------------~~~~~~~~~~~~~~~~~~~l~~~~vdg--iI~~~~~~~-~~~~~~~~~ 85 (293)
T 3l6u_A 23 AQRLINAFKAEAKANKYE--------------ALVATSQNSRISEREQILEFVHLKVDA--IFITTLDDV-YIGSAIEEA 85 (293)
T ss_dssp HHHHHHHHHHHHHHTTCE--------------EEEEECSSCHHHHHHHHHHHHHTTCSE--EEEECSCTT-TTHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCE--------------EEEECCCCCHHHHHHHHHHHHHcCCCE--EEEecCChH-HHHHHHHHH
Confidence 456777888888887754 223333332 22223333333333222 222222211 112677888
Q ss_pred HhCCCCEEEeC
Q 023530 178 ERHGIPYHYLC 188 (281)
Q Consensus 178 ~~~gIP~~~i~ 188 (281)
.+.|||+..++
T Consensus 86 ~~~~iPvV~~~ 96 (293)
T 3l6u_A 86 KKAGIPVFAID 96 (293)
T ss_dssp HHTTCCEEEES
T ss_pred HHcCCCEEEec
Confidence 89999999998
No 369
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=22.26 E-value=3e+02 Score=23.12 Aligned_cols=78 Identities=13% Similarity=0.141 Sum_probs=40.0
Q ss_pred CeeEEEEee-CC-h-hHHHHHHHhhhcCCCCeeEEEEEeCCC-CCCC--hhHHH--HHHhCCCCEEEeCCCCCChHHHHH
Q 023530 128 KYKVAVLAS-KQ-E-HCLVDFLYGWQEGKLPVEITCVISNHD-RGPN--SHVIR--FLERHGIPYHYLCAKENEREEELL 199 (281)
Q Consensus 128 ~~rIavl~S-g~-G-snL~aLl~~~~~g~l~~eI~~Visn~p-d~~~--a~~~~--~A~~~gIP~~~i~~k~~~~e~~l~ 199 (281)
+++|+|.+. |. | +..+.|+++ | .+|.++ +.++ ...+ ..... ..+..|+.++..+- .+.+.+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~---g---~~V~~~-~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~---~d~~~l~ 71 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA---G---NPTYAL-VRKTITAANPETKEELIDNYQSLGVILLEGDI---NDHETLV 71 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH---T---CCEEEE-ECCSCCSSCHHHHHHHHHHHHHTTCEEEECCT---TCHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhC---C---CcEEEE-ECCCcccCChHHHHHHHHHHHhCCCEEEEeCC---CCHHHHH
Confidence 457777764 33 4 445556553 5 466544 3322 1001 11111 11346777777651 1234677
Q ss_pred HHHhCCCEEEE-ecccc
Q 023530 200 ELVQNTDFLVL-ARYMQ 215 (281)
Q Consensus 200 ~~L~~~DlIVL-AgYMr 215 (281)
++++++|.||. ||+..
T Consensus 72 ~~~~~~d~vi~~a~~~~ 88 (307)
T 2gas_A 72 KAIKQVDIVICAAGRLL 88 (307)
T ss_dssp HHHTTCSEEEECSSSSC
T ss_pred HHHhCCCEEEECCcccc
Confidence 77888998875 45543
No 370
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=22.13 E-value=1.5e+02 Score=25.88 Aligned_cols=41 Identities=27% Similarity=0.345 Sum_probs=21.8
Q ss_pred HHHHHHhCCCCEEEeCCCCC-ChHHHHHHHHh--CCCEEEEecc
Q 023530 173 VIRFLERHGIPYHYLCAKEN-EREEELLELVQ--NTDFLVLARY 213 (281)
Q Consensus 173 ~~~~A~~~gIP~~~i~~k~~-~~e~~l~~~L~--~~DlIVLAgY 213 (281)
+.+.|+++|..+.......+ ..+.++++.+. ++|-||+++.
T Consensus 92 i~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~ 135 (355)
T 3e3m_A 92 LTDVLEQGGLQLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYD 135 (355)
T ss_dssp HHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred HHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCC
Confidence 45566777776666542211 12233444333 6777777654
No 371
>2j5a_A 30S ribosomal protein S6; ribonucleoprotein, RIBO protein S6, RNA-binding, rRNA-binding, protein folding; 2.3A {Aquifex aeolicus} SCOP: d.58.14.1
Probab=22.09 E-value=2.6e+02 Score=21.10 Aligned_cols=52 Identities=17% Similarity=0.291 Sum_probs=34.8
Q ss_pred CcchHHHHHHHHHhCCCeEeEeeeec---------cCCCCeEEEEEEEEe-CCCCCCHHHHHHHH
Q 023530 52 EVGIVAKLSECIASRGGNILAADVFV---------PEKKNVFYSRSEFIF-DPIKWPREQMDEDF 106 (281)
Q Consensus 52 rpGIVa~VS~~La~~giNI~dl~q~~---------~~~~g~F~mrlev~~-p~~~~~~~~L~~~L 106 (281)
...++..+.+.+.++|+.|.+++.-- ....|.|+ .+.++. ++ ....+|...|
T Consensus 25 ~~~~v~~~~~~i~~~Gg~i~~~e~wG~R~LAY~I~K~~~G~Y~-l~~f~a~~~--~~i~eler~l 86 (110)
T 2j5a_A 25 MKKKFEQVKEFIKQKGGEILYEEDWGMRQLAYPIQKFNNARYF-LVQFKTENP--QLPNELDFQL 86 (110)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEEEEEEEECSSCSSSCSEEEEE-EEEEEESCT--THHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEeecCcccccCcCCCCEEEEE-EEEEEeCCH--HHHHHHHHHh
Confidence 35889999999999999999887532 11355554 577777 53 2355555444
No 372
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=22.08 E-value=1.5e+02 Score=23.86 Aligned_cols=17 Identities=24% Similarity=0.380 Sum_probs=11.9
Q ss_pred HHHHHHHHhCCCEEEEe
Q 023530 195 EEELLELVQNTDFLVLA 211 (281)
Q Consensus 195 e~~l~~~L~~~DlIVLA 211 (281)
.+.+.++++++|.||-+
T Consensus 58 ~~~~~~~~~~~d~vi~~ 74 (227)
T 3dhn_A 58 LDEVCEVCKGADAVISA 74 (227)
T ss_dssp HHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhcCCCEEEEe
Confidence 34566777788887764
No 373
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=21.90 E-value=2.6e+02 Score=24.79 Aligned_cols=9 Identities=0% Similarity=0.043 Sum_probs=4.7
Q ss_pred CCCEEEEec
Q 023530 204 NTDFLVLAR 212 (281)
Q Consensus 204 ~~DlIVLAg 212 (281)
++|+||.+|
T Consensus 82 ~~d~vvv~G 90 (332)
T 2bon_A 82 GVATVIAGG 90 (332)
T ss_dssp TCSEEEEEE
T ss_pred CCCEEEEEc
Confidence 455555543
No 374
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=21.89 E-value=1.2e+02 Score=26.61 Aligned_cols=36 Identities=8% Similarity=0.182 Sum_probs=20.0
Q ss_pred hHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh---CCCEEEE
Q 023530 172 HVIRFLERHGIPYHYLCAKENEREEELLELVQ---NTDFLVL 210 (281)
Q Consensus 172 ~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~---~~DlIVL 210 (281)
.+.+.+++.+|++...+...+. ++.+.|. ++.+++|
T Consensus 217 ~l~~~ik~~~v~~if~e~~~~~---~~~~~ia~~~g~~v~~l 255 (284)
T 3cx3_A 217 EIQEFVKTYKVKTIFTESNASS---KVAETLVKSTGVGLKTL 255 (284)
T ss_dssp HHHHHHHHTTCCCEEECSSSCC---HHHHHHHSSSSCCEEEC
T ss_pred HHHHHHHHcCCCEEEEeCCCCc---HHHHHHHHHcCCeEEEe
Confidence 3566677888887776532221 3444444 4555544
No 375
>1jqk_A CODH, carbon monoxide dehydrogenase; rossmann fold, oxidoreductase; 2.80A {Rhodospirillum rubrum} SCOP: e.26.1.2
Probab=21.85 E-value=2.8e+02 Score=27.91 Aligned_cols=98 Identities=12% Similarity=0.100 Sum_probs=63.7
Q ss_pred CeeEEEEeeCCh-hHHHHHHHh--------hhcCCC-CeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHH
Q 023530 128 KYKVAVLASKQE-HCLVDFLYG--------WQEGKL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (281)
Q Consensus 128 ~~rIavl~Sg~G-snL~aLl~~--------~~~g~l-~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~ 197 (281)
+.++.|++||.. .-++.|++. -+.|.- ..+|.++.|.+ -+.-..||+|+.- +-. . +
T Consensus 255 ~~~vnIlV~GH~~~~~e~ll~~a~e~~~~Akq~ga~~GInvyG~cCT~--------~EmL~~hg~pl~G--N~~-~---q 320 (639)
T 1jqk_A 255 RGAVNIAVNGHNPMLSDIICDVAADLRDEAIAAGAAEGINIIGICCTG--------HEVMMRHGVPLAT--NYL-S---Q 320 (639)
T ss_dssp TTEEEEEEESSCHHHHHHHHHHHHHTTTHHHHTTCTTEEEEEEEHHHH--------HHHHHHSCCCEEE--CST-T---T
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeeccH--------HHHhhhcCCCcCC--cHH-H---H
Confidence 468999999975 444555633 223433 47899999876 5667779999443 111 1 1
Q ss_pred HHHHHh-CCCEEEEecccccCCh--hHHhhhcCCcee-ccCCCCCCC
Q 023530 198 LLELVQ-NTDFLVLARYMQPVPL--QKEAYLGYKLLE-SLSSKGSLT 240 (281)
Q Consensus 198 l~~~L~-~~DlIVLAgYMrILs~--~fl~~~~~riIN-SLLP~f~G~ 240 (281)
-..+.- -+|.||+ -+==|.++ +..+.|..|++= |-.=+|+|+
T Consensus 321 E~~~~tGavDaiv~-d~nCi~p~l~~~a~~y~~rviTT~~~a~~pG~ 366 (639)
T 1jqk_A 321 ELPILTGALEAMVV-DVQCIMPSLPRIAECFHTQIITTDKHNKISGA 366 (639)
T ss_dssp THHHHTTCCCEEEE-CSSSCCTTHHHHHHTSSCEEEECCTTCCCTTS
T ss_pred HHHhcCCCcceEEE-eCCCCCCCcHHHHHHhCCeEEEcccccCCCCC
Confidence 123334 5799887 45556665 455679999998 666688886
No 376
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=21.85 E-value=1.2e+02 Score=25.08 Aligned_cols=48 Identities=10% Similarity=0.012 Sum_probs=30.3
Q ss_pred hHHHHHHhCCCCEEEeCCCCC-ChHHHHHHHHh--CCCEEEEecccccCChhHHh
Q 023530 172 HVIRFLERHGIPYHYLCAKEN-EREEELLELVQ--NTDFLVLARYMQPVPLQKEA 223 (281)
Q Consensus 172 ~~~~~A~~~gIP~~~i~~k~~-~~e~~l~~~L~--~~DlIVLAgYMrILs~~fl~ 223 (281)
.+.+.|+++|..+...+...+ ..+.++++.+. ++|-||+.+ .+++.++
T Consensus 29 gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~----~~~~~~~ 79 (277)
T 3e61_A 29 GVEDVALAHGYQVLIGNSDNDIKKAQGYLATFVSHNCTGMISTA----FNENIIE 79 (277)
T ss_dssp HHHHHHHHTTCCEEEEECTTCHHHHHHHHHHHHHTTCSEEEECG----GGHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEec----CChHHHH
Confidence 356678888988877763322 12334555544 899999987 3455555
No 377
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=21.83 E-value=1.3e+02 Score=25.76 Aligned_cols=62 Identities=10% Similarity=0.130 Sum_probs=32.3
Q ss_pred eeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCCCE
Q 023530 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (281)
Q Consensus 129 ~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~Dl 207 (281)
+||+|++.|. |+.+-..+.. .| .+|. +.|+ .... .+.+.+.|+.+ .. + ..+.++++|+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~--~g---~~V~--~~~~---~~~~-~~~~~~~g~~~--~~----~----~~~~~~~~Dv 59 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMK--HG---YPLI--IYDV---FPDA-CKEFQDAGEQV--VS----S----PADVAEKADR 59 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHH--TT---CCEE--EECS---STHH-HHHHHTTTCEE--CS----S----HHHHHHHCSE
T ss_pred CeEEEEeccHHHHHHHHHHHH--CC---CEEE--EEeC---CHHH-HHHHHHcCCee--cC----C----HHHHHhcCCE
Confidence 4899999998 6555443332 34 3554 4454 1222 33444556532 11 1 1133446788
Q ss_pred EEEe
Q 023530 208 LVLA 211 (281)
Q Consensus 208 IVLA 211 (281)
|+++
T Consensus 60 vi~~ 63 (296)
T 2gf2_A 60 IITM 63 (296)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8887
No 378
>2fts_A Gephyrin; gephyrin, neuroreceptor anchoring, structu protein; 2.41A {Rattus norvegicus} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 2fu3_A 1t3e_A
Probab=21.68 E-value=92 Score=29.32 Aligned_cols=48 Identities=15% Similarity=0.212 Sum_probs=24.6
Q ss_pred HHHHHHhCCCCEEEeC-CCCCChH---HHHHHHHhCCCEEEEecccccCChhH
Q 023530 173 VIRFLERHGIPYHYLC-AKENERE---EELLELVQNTDFLVLARYMQPVPLQK 221 (281)
Q Consensus 173 ~~~~A~~~gIP~~~i~-~k~~~~e---~~l~~~L~~~DlIVLAgYMrILs~~f 221 (281)
...+.+++|..+.... -++ +.+ +++.+.++++|+||+.|=+-.=+.++
T Consensus 213 L~~~l~~~G~~v~~~~iv~D-d~~~i~~~l~~a~~~~DlVittGG~s~g~~D~ 264 (419)
T 2fts_A 213 LLATIQEHGYPTINLGIVGD-NPDDLLNALNEGISRADVIITSGGVSMGEKDY 264 (419)
T ss_dssp HHHHHHTTTCCEEEEEEECS-SHHHHHHHHHHHHHHCSEEEEESCCSSSCCHH
T ss_pred HHHHHHHCCCEEEEEeecCC-CHHHHHHHHHHHHhcCCEEEEcCCCcCCCccc
Confidence 4556777787655433 111 111 22333333678888887554433333
No 379
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=21.65 E-value=1.5e+02 Score=28.85 Aligned_cols=80 Identities=10% Similarity=0.015 Sum_probs=42.0
Q ss_pred HHHHHHHHHhhhhcccceeeeec-CCCCCeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCCCCC--CChhHHH
Q 023530 101 QMDEDFFKLSKMFNAMRSVVRVP-DIDPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRG--PNSHVIR 175 (281)
Q Consensus 101 ~L~~~L~~la~~l~l~~~~~~~~-~~~~~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~pd~--~~a~~~~ 175 (281)
.+++.|..+.+---|+...+.-. +.=+-++|||++-|+ |++ .++|=| +| .+ .+|..+++. .+..-.+
T Consensus 9 ~~~~~~~~~~~c~~m~~~eF~~~~~~lkgK~IaVIGyGsQG~AqAlNLRD---SG---v~--V~Vglr~~s~~e~~~S~~ 80 (491)
T 3ulk_A 9 NLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVGCGAQGLNQGLNMRD---SG---LD--ISYALRKEAIAEKRASWR 80 (491)
T ss_dssp CHHHHHHHHTCCEECCGGGGTTTTGGGTTSEEEEESCSHHHHHHHHHHHH---TT---CE--EEEEECHHHHHTTCHHHH
T ss_pred cHHHHHHHhccceeccHHHhcchhHHHcCCEEEEeCCChHhHHHHhHHHh---cC---Cc--EEEEeCCCCcccccchHH
Confidence 46777777754332332222100 001237999999998 432 122323 34 23 355665221 1124567
Q ss_pred HHHhCCCCEEEeC
Q 023530 176 FLERHGIPYHYLC 188 (281)
Q Consensus 176 ~A~~~gIP~~~i~ 188 (281)
.|++.|..+..+.
T Consensus 81 ~A~~~Gf~v~~~~ 93 (491)
T 3ulk_A 81 KATENGFKVGTYE 93 (491)
T ss_dssp HHHHTTCEEEEHH
T ss_pred HHHHCCCEecCHH
Confidence 8999999887754
No 380
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=21.48 E-value=90 Score=24.17 Aligned_cols=30 Identities=20% Similarity=0.435 Sum_probs=22.0
Q ss_pred EEE-EEeCCCCCCChhHHHHHHhCCCCEEEeC
Q 023530 158 ITC-VISNHDRGPNSHVIRFLERHGIPYHYLC 188 (281)
Q Consensus 158 I~~-Visn~pd~~~a~~~~~A~~~gIP~~~i~ 188 (281)
+.+ |+|..- .++..+++.|+++|||+...+
T Consensus 75 ~~~iIlt~g~-~~~~~i~~~A~~~~ipvl~t~ 105 (139)
T 2ioj_A 75 VRCLILTGNL-EPVQLVLTKAEERGVPVILTG 105 (139)
T ss_dssp EEEEEEETTC-CCCHHHHHHHHHHTCCEEECS
T ss_pred CcEEEEcCCC-CCCHHHHHHHHHCCCeEEEEC
Confidence 444 556432 266788999999999999966
No 381
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=21.46 E-value=3.6e+02 Score=22.59 Aligned_cols=72 Identities=14% Similarity=0.088 Sum_probs=37.7
Q ss_pred CeeEEEEeeCC--h-hHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhC
Q 023530 128 KYKVAVLASKQ--E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 128 ~~rIavl~Sg~--G-snL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
+++|.|.+..+ | +..+.|+++ |. .+|.++.-+ ++ ...... ....|+.+...+- .+.+.+.+.+++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~---g~--~~V~~~~R~-~~--~~~~~~-l~~~~~~~~~~D~---~d~~~l~~~~~~ 72 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED---GT--FKVRVVTRN-PR--KKAAKE-LRLQGAEVVQGDQ---DDQVIMELALNG 72 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH---CS--SEEEEEESC-TT--SHHHHH-HHHTTCEEEECCT---TCHHHHHHHHTT
T ss_pred CCEEEEECCCchHHHHHHHHHHhc---CC--ceEEEEEcC-CC--CHHHHH-HHHCCCEEEEecC---CCHHHHHHHHhc
Confidence 35666665433 3 334445543 42 467655433 32 221222 2345777766551 123457677788
Q ss_pred CCEEEEe
Q 023530 205 TDFLVLA 211 (281)
Q Consensus 205 ~DlIVLA 211 (281)
+|.|+.+
T Consensus 73 ~d~vi~~ 79 (299)
T 2wm3_A 73 AYATFIV 79 (299)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 9988874
No 382
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=21.43 E-value=1.3e+02 Score=29.01 Aligned_cols=56 Identities=20% Similarity=0.172 Sum_probs=36.0
Q ss_pred eeEEEEeeCC-hh-HHHHHHHhhhcCCCCeeEEEEEeCCCCCCC---hhHHH-HHHhCCCCEEEeC
Q 023530 129 YKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIR-FLERHGIPYHYLC 188 (281)
Q Consensus 129 ~rIavl~Sg~-Gs-nL~aLl~~~~~g~l~~eI~~Visn~pd~~~---a~~~~-~A~~~gIP~~~i~ 188 (281)
.|+++..||+ +| .+-.++.+. -| .++.+|..|+...+. ..+.+ +|+.+|||+++++
T Consensus 228 ~~vvvalSGGvDSsv~a~ll~~a-~G---~~v~av~v~~g~~~~~e~~~~~~~la~~lgi~~~~v~ 289 (525)
T 1gpm_A 228 DKVILGLSGGVDSSVTAMLLHRA-IG---KNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVP 289 (525)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHH-HG---GGEEEEEEECSCSCTTHHHHHHHHHTTTTCCCEEEEE
T ss_pred cceEEEecCCCCHHHHHHHHHHH-hC---CCEEEEEEeCCCCCchHHHHHHHHHHHHhCCcEEEEe
Confidence 5899999997 34 444444331 13 468788877643222 13434 6888999999987
No 383
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=21.39 E-value=3.1e+02 Score=24.59 Aligned_cols=74 Identities=15% Similarity=0.157 Sum_probs=37.1
Q ss_pred CeeEEEEeeCChhHHHHHHHhhh-cCCCCe-eEEEEEeCCCCCCChhHHHHHHh----CCCCEEEeCCCCCChHHHHHHH
Q 023530 128 KYKVAVLASKQEHCLVDFLYGWQ-EGKLPV-EITCVISNHDRGPNSHVIRFLER----HGIPYHYLCAKENEREEELLEL 201 (281)
Q Consensus 128 ~~rIavl~Sg~GsnL~aLl~~~~-~g~l~~-eI~~Visn~pd~~~a~~~~~A~~----~gIP~~~i~~k~~~~e~~l~~~ 201 (281)
.+++.|+++| | .-++++.+.. .| + +| +|.|+.+.....+.+.|++ .+..+..++-. + .+++.+.
T Consensus 154 gk~~lVlGaG-G-~g~aia~~L~~~G---a~~V--~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~--~-~~~l~~~ 223 (315)
T 3tnl_A 154 GKKMTICGAG-G-AATAICIQAALDG---VKEI--SIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIE--D-HEQLRKE 223 (315)
T ss_dssp TSEEEEECCS-H-HHHHHHHHHHHTT---CSEE--EEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETT--C-HHHHHHH
T ss_pred CCEEEEECCC-h-HHHHHHHHHHHCC---CCEE--EEEECCCchHHHHHHHHHHhhhhcCCceEEeccc--h-HHHHHhh
Confidence 3578888886 3 2233333322 23 3 44 3456521002334444433 45555554411 1 2345566
Q ss_pred HhCCCEEEEe
Q 023530 202 VQNTDFLVLA 211 (281)
Q Consensus 202 L~~~DlIVLA 211 (281)
+.++|+||-|
T Consensus 224 l~~aDiIINa 233 (315)
T 3tnl_A 224 IAESVIFTNA 233 (315)
T ss_dssp HHTCSEEEEC
T ss_pred hcCCCEEEEC
Confidence 7799999976
No 384
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=21.31 E-value=4.6e+02 Score=23.69 Aligned_cols=94 Identities=11% Similarity=0.117 Sum_probs=50.1
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCC--------------
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-------------- 191 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~-------------- 191 (281)
+..+|+|++.|. |.....++.+ .| ++| ++.|+. . .-++.++++|..+..++...
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~--~G---a~V--~~~d~~---~-~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~ 239 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKR--LG---AVV--MATDVR---A-ATKEQVESLGGKFITVDDEAMKTAETAGGYAKEM 239 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TT---CEE--EEECSC---S-TTHHHHHHTTCEECCC------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CC---CEE--EEEeCC---H-HHHHHHHHcCCeEEeecccccccccccccchhhc
Confidence 356899999886 4444334433 34 453 344431 1 12456677886543122100
Q ss_pred C-----ChHHHHHHHHhCCCEEEEeccc------ccCChhHHhhhc--CCcee
Q 023530 192 N-----EREEELLELVQNTDFLVLARYM------QPVPLQKEAYLG--YKLLE 231 (281)
Q Consensus 192 ~-----~~e~~l~~~L~~~DlIVLAgYM------rILs~~fl~~~~--~riIN 231 (281)
. ...+.+.+.++++|+|+.+-+. .+++.+.++..+ ..++|
T Consensus 240 s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivd 292 (384)
T 1l7d_A 240 GEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIID 292 (384)
T ss_dssp -----CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEE
T ss_pred CHHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEE
Confidence 0 0112355666689999987632 356677776654 45666
No 385
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=21.17 E-value=2e+02 Score=25.32 Aligned_cols=69 Identities=12% Similarity=0.065 Sum_probs=37.8
Q ss_pred CCeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhC
Q 023530 127 PKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (281)
Q Consensus 127 ~~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~ 204 (281)
..++|+|++.|. |.. +.+|... .| .+-+ .+.|+ ....+.+++++++-.+...+ + +.+.+++
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~--~g---~~~V-~v~dr---~~~~~~~l~~~~~~~~~~~~----~----~~e~v~~ 196 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQ--FS---FKEV-RIWNR---TKENAEKFADTVQGEVRVCS----S----VQEAVAG 196 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH--CC---CSEE-EEECS---SHHHHHHHHHHSSSCCEECS----S----HHHHHTT
T ss_pred CCcEEEEECCcHHHHHHHHHHHHh--CC---CcEE-EEEcC---CHHHHHHHHHHhhCCeEEeC----C----HHHHHhc
Confidence 356899999987 333 3334332 13 2222 34565 23456667777662122221 1 2345568
Q ss_pred CCEEEEec
Q 023530 205 TDFLVLAR 212 (281)
Q Consensus 205 ~DlIVLAg 212 (281)
+|+|+++=
T Consensus 197 aDiVi~at 204 (312)
T 2i99_A 197 ADVIITVT 204 (312)
T ss_dssp CSEEEECC
T ss_pred CCEEEEEe
Confidence 99999984
No 386
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=21.13 E-value=3.1e+02 Score=21.69 Aligned_cols=74 Identities=7% Similarity=-0.047 Sum_probs=45.5
Q ss_pred CCeeEEEEeeCChhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhC---CCCEEEeC-CCCCChHHHHHHHH
Q 023530 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH---GIPYHYLC-AKENEREEELLELV 202 (281)
Q Consensus 127 ~~~rIavl~Sg~GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~---gIP~~~i~-~k~~~~e~~l~~~L 202 (281)
+..+|.=+++|.|..+..|..+ + .++.+|=- +...++.|++. ++.+...+ .+... .
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~---~---~~v~~vD~------s~~~~~~a~~~~~~~~~~~~~d~~~~~~------~-- 104 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA---G---RTVYGIEP------SREMRMIAKEKLPKEFSITEGDFLSFEV------P-- 104 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT---T---CEEEEECS------CHHHHHHHHHHSCTTCCEESCCSSSCCC------C--
T ss_pred CCCeEEEeCCCCCHHHHHHHhC---C---CeEEEEeC------CHHHHHHHHHhCCCceEEEeCChhhcCC------C--
Confidence 3458999999999888887774 3 46655533 23456677665 56666544 11100 0
Q ss_pred hCCCEEEEecccccCChh
Q 023530 203 QNTDFLVLARYMQPVPLQ 220 (281)
Q Consensus 203 ~~~DlIVLAgYMrILs~~ 220 (281)
...|+|++..-+..+++.
T Consensus 105 ~~fD~v~~~~~l~~~~~~ 122 (220)
T 3hnr_A 105 TSIDTIVSTYAFHHLTDD 122 (220)
T ss_dssp SCCSEEEEESCGGGSCHH
T ss_pred CCeEEEEECcchhcCChH
Confidence 257777777766666654
No 387
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=21.08 E-value=2.9e+02 Score=22.77 Aligned_cols=75 Identities=12% Similarity=0.120 Sum_probs=40.1
Q ss_pred HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeC-CCCCChHHHHHHHHh-CCCEEEEecccccCCh
Q 023530 142 LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENEREEELLELVQ-NTDFLVLARYMQPVPL 219 (281)
Q Consensus 142 L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~-~k~~~~e~~l~~~L~-~~DlIVLAgYMrILs~ 219 (281)
|++|..+.+.+ ..|+.|-..+ .-..+..+++-+|++..... ....+.++.+.++.+ ++|.||=.++. .
T Consensus 84 l~al~~a~~~~---~kIavvg~~~---~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~~----~ 153 (196)
T 2q5c_A 84 MRAVYNAKRFG---NELALIAYKH---SIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKTV----T 153 (196)
T ss_dssp HHHHHHHGGGC---SEEEEEEESS---CSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHHH----H
T ss_pred HHHHHHHHhhC---CcEEEEeCcc---hhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHHH----H
Confidence 44454443333 3566554443 23356778888888877665 322222333334434 89998875543 3
Q ss_pred hHHhhhc
Q 023530 220 QKEAYLG 226 (281)
Q Consensus 220 ~fl~~~~ 226 (281)
++.+++.
T Consensus 154 ~~A~~~G 160 (196)
T 2q5c_A 154 DEAIKQG 160 (196)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 4445544
No 388
>1su8_A CODH 2, carbon monoxide dehydrogenase 2; nickel, cluster C, oxidoreductase; HET: NFS; 1.10A {Carboxydothermus hydrogenoformans} SCOP: e.26.1.2 PDB: 1su6_A* 1su7_A* 1suf_A* 2yiv_X* 3b51_X 3b52_X 3b53_X 3i39_X
Probab=21.07 E-value=2.5e+02 Score=28.24 Aligned_cols=98 Identities=16% Similarity=0.133 Sum_probs=63.3
Q ss_pred CeeEEEEeeCCh-hHHHHHHHhhh--------cCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHH
Q 023530 128 KYKVAVLASKQE-HCLVDFLYGWQ--------EGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEEL 198 (281)
Q Consensus 128 ~~rIavl~Sg~G-snL~aLl~~~~--------~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l 198 (281)
+.++.|++||.. .-++.|++..+ .|.-..+|.++.|.| -+.-..||+|+.- + +-.+-
T Consensus 251 ~~~vnIlV~GHd~~~~e~l~~~a~e~~~~akq~ga~GInvyG~cCT~--------~EmL~~hg~pl~G--N----~~~qE 316 (636)
T 1su8_A 251 ADAVNVAVHGHNPVLSDIIVSVSKEMENEARAAGATGINVVGICCTG--------NEVLMRHGIPACT--H----SVSQE 316 (636)
T ss_dssp TTSEEEEEESSCHHHHHHHHHHHHHTHHHHHHTTCSCEEEEEEHHHH--------HHHHHHHCCCEEE--C----GGGTH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHHHHHHHHcCCCCcEEEEeeccH--------HHHhhhcCCCcCC--c----HHHHH
Confidence 457899999986 44455544422 333368999999876 4666678999443 1 11112
Q ss_pred HHHHh-CCCEEEEecccccCCh--hHHhhhcCCcee-ccCCCCCCC
Q 023530 199 LELVQ-NTDFLVLARYMQPVPL--QKEAYLGYKLLE-SLSSKGSLT 240 (281)
Q Consensus 199 ~~~L~-~~DlIVLAgYMrILs~--~fl~~~~~riIN-SLLP~f~G~ 240 (281)
....- -+|.||+ -+==|.++ +..+.|..|++= |-.=+|+|+
T Consensus 317 ~~~~tGavDaiv~-d~nCi~p~l~~~a~~y~~rviTT~~~a~~pG~ 361 (636)
T 1su8_A 317 MAMITGALDAMIL-DYQCIQPSVATIAECTGTTVITTMEMSKITGA 361 (636)
T ss_dssp HHHHTSCEEEEEE-CSSSCCTTHHHHHHHHCCEEEECBTTBCCTTS
T ss_pred HHhcCCCcceEEE-eCCCCCCCchHHHHHhCCeEEEcccccCCCCC
Confidence 23334 5788887 55556665 455679999998 666678886
No 389
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=20.86 E-value=1.1e+02 Score=27.04 Aligned_cols=73 Identities=21% Similarity=0.120 Sum_probs=39.8
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCe-eEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh-
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPV-EITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~-eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~- 203 (281)
+-.+|+|.++|. |...-.+..+ .| + +|.++-++ + .-+++|+++|.... ++....+..+++.+...
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~--~G---a~~Vi~~~~~-~-----~~~~~~~~lGa~~v-i~~~~~~~~~~v~~~t~g 233 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANH--LG---AGRIFAVGSR-K-----HCCDIALEYGATDI-INYKNGDIVEQILKATDG 233 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHT--TT---CSSEEEECCC-H-----HHHHHHHHHTCCEE-ECGGGSCHHHHHHHHTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cC---CcEEEEECCC-H-----HHHHHHHHhCCceE-EcCCCcCHHHHHHHHcCC
Confidence 345788887654 3333333332 33 4 56654333 2 23689999997644 44222233345555554
Q ss_pred -CCCEEEEe
Q 023530 204 -NTDFLVLA 211 (281)
Q Consensus 204 -~~DlIVLA 211 (281)
.+|+++-+
T Consensus 234 ~g~D~v~d~ 242 (352)
T 3fpc_A 234 KGVDKVVIA 242 (352)
T ss_dssp CCEEEEEEC
T ss_pred CCCCEEEEC
Confidence 58888764
No 390
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=20.84 E-value=58 Score=29.02 Aligned_cols=21 Identities=10% Similarity=0.077 Sum_probs=14.6
Q ss_pred CCCeeEEEEeeCC-hhHHHHHH
Q 023530 126 DPKYKVAVLASKQ-EHCLVDFL 146 (281)
Q Consensus 126 ~~~~rIavl~Sg~-GsnL~aLl 146 (281)
..++||+|++.|. |..+-..+
T Consensus 22 ~M~m~IgvIG~G~mG~~lA~~L 43 (317)
T 4ezb_A 22 SMMTTIAFIGFGEAAQSIAGGL 43 (317)
T ss_dssp TSCCEEEEECCSHHHHHHHHHH
T ss_pred ccCCeEEEECccHHHHHHHHHH
Confidence 3457999999998 65554433
No 391
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=20.81 E-value=88 Score=27.11 Aligned_cols=65 Identities=12% Similarity=0.274 Sum_probs=35.8
Q ss_pred CeeEEEEeeCC-hhH-HHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCC
Q 023530 128 KYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (281)
Q Consensus 128 ~~rIavl~Sg~-Gsn-L~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~ 205 (281)
.+||+|++.|. |.. ...|.+ .| ++| ++.|+ ....+.++++++|+ ...+ + +.+.++++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~---~g---~~V--~v~~r---~~~~~~~l~~~~g~--~~~~----~----~~~~~~~a 187 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVK---EG---AKV--FLWNR---TKEKAIKLAQKFPL--EVVN----S----PEEVIDKV 187 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHH---HT---CEE--EEECS---SHHHHHHHTTTSCE--EECS----C----GGGTGGGC
T ss_pred CCEEEEECchHHHHHHHHHHHH---cC---CEE--EEEEC---CHHHHHHHHHHcCC--eeeh----h----HHhhhcCC
Confidence 35899999886 332 233333 24 343 56675 22345566667764 2221 1 12344589
Q ss_pred CEEEEecc
Q 023530 206 DFLVLARY 213 (281)
Q Consensus 206 DlIVLAgY 213 (281)
|+||+|=-
T Consensus 188 DiVi~atp 195 (275)
T 2hk9_A 188 QVIVNTTS 195 (275)
T ss_dssp SEEEECSS
T ss_pred CEEEEeCC
Confidence 99999843
No 392
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=20.72 E-value=2.4e+02 Score=27.12 Aligned_cols=83 Identities=13% Similarity=0.142 Sum_probs=48.3
Q ss_pred CCeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHhCC
Q 023530 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (281)
Q Consensus 127 ~~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~~~ 205 (281)
..++|+|++-|. |..+-..+.. .| ++| ++.|+ +......|...|+.+ . .+.++++++
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~~--~G---~~V--iv~d~----~~~~~~~a~~~g~~~--~---------~l~ell~~a 313 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMKG--LG---ARV--YITEI----DPICAIQAVMEGFNV--V---------TLDEIVDKG 313 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH--HT---CEE--EEECS----CHHHHHHHHTTTCEE--C---------CHHHHTTTC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh--Cc---CEE--EEEeC----ChhhHHHHHHcCCEe--c---------CHHHHHhcC
Confidence 456899999887 5554444443 24 454 34553 111122455666532 1 144667799
Q ss_pred CEEEEe-cccccCChhHHhhhcCC--cee
Q 023530 206 DFLVLA-RYMQPVPLQKEAYLGYK--LLE 231 (281)
Q Consensus 206 DlIVLA-gYMrILs~~fl~~~~~r--iIN 231 (281)
|+|+++ +--.+++.+.++..+.+ ++|
T Consensus 314 DiVi~~~~t~~lI~~~~l~~MK~gailiN 342 (479)
T 1v8b_A 314 DFFITCTGNVDVIKLEHLLKMKNNAVVGN 342 (479)
T ss_dssp SEEEECCSSSSSBCHHHHTTCCTTCEEEE
T ss_pred CEEEECCChhhhcCHHHHhhcCCCcEEEE
Confidence 999999 44556777777766643 356
No 393
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=20.65 E-value=1.8e+02 Score=24.05 Aligned_cols=43 Identities=19% Similarity=0.259 Sum_probs=23.8
Q ss_pred hHHHHHHhCCCCEEEeCCCCC-ChHHHHHHHH-h-CCCEEEEeccc
Q 023530 172 HVIRFLERHGIPYHYLCAKEN-EREEELLELV-Q-NTDFLVLARYM 214 (281)
Q Consensus 172 ~~~~~A~~~gIP~~~i~~k~~-~~e~~l~~~L-~-~~DlIVLAgYM 214 (281)
.+.+.|+++|..+...+...+ ..+.+.++.+ . ++|-||+.+.-
T Consensus 36 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~ 81 (298)
T 3tb6_A 36 GIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTK 81 (298)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSS
T ss_pred HHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEeccc
Confidence 355667777777766653221 1223344433 3 78888876653
No 394
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=20.61 E-value=1.4e+02 Score=26.62 Aligned_cols=17 Identities=29% Similarity=0.292 Sum_probs=12.5
Q ss_pred eEEEEeeCC-hhHHHHHH
Q 023530 130 KVAVLASKQ-EHCLVDFL 146 (281)
Q Consensus 130 rIavl~Sg~-GsnL~aLl 146 (281)
||+|++.|. |+.+-..+
T Consensus 17 kI~iIG~G~mG~~la~~L 34 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVL 34 (366)
T ss_dssp EEEEECCSHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHH
Confidence 899999998 65554444
No 395
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=20.56 E-value=43 Score=28.34 Aligned_cols=47 Identities=19% Similarity=0.205 Sum_probs=25.5
Q ss_pred eeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCE
Q 023530 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (281)
Q Consensus 129 ~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~ 184 (281)
+||+|++.|. |+.+-..+.. .|. .+| .+.|+ ......+.++++|+.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~--~g~--~~v--~~~~r---~~~~~~~~~~~~g~~~ 48 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVK--QGG--YRI--YIANR---GAEKRERLEKELGVET 48 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HCS--CEE--EEECS---SHHHHHHHHHHTCCEE
T ss_pred CEEEEECchHHHHHHHHHHHH--CCC--CeE--EEECC---CHHHHHHHHHhcCCEE
Confidence 4899999987 5544333322 341 344 34454 2234455566678653
No 396
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=20.26 E-value=2.3e+02 Score=24.82 Aligned_cols=10 Identities=20% Similarity=0.149 Sum_probs=6.0
Q ss_pred CCeeEEEEee
Q 023530 127 PKYKVAVLAS 136 (281)
Q Consensus 127 ~~~rIavl~S 136 (281)
.++|+.|++-
T Consensus 7 ~m~~~~vi~N 16 (304)
T 3s40_A 7 KFEKVLLIVN 16 (304)
T ss_dssp SCSSEEEEEC
T ss_pred CCCEEEEEEC
Confidence 4567777654
No 397
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=20.16 E-value=1.7e+02 Score=25.41 Aligned_cols=61 Identities=10% Similarity=-0.081 Sum_probs=36.6
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCC---C--eeEEEEEeCCCCC-CChhHHHHHHhCCC-CEEEeC
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKL---P--VEITCVISNHDRG-PNSHVIRFLERHGI-PYHYLC 188 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l---~--~eI~~Visn~pd~-~~a~~~~~A~~~gI-P~~~i~ 188 (281)
..+++|-.||+ +|.+-+.+-+...+.+ + .++.+|....... .-..+.+.|+..|| +++.++
T Consensus 38 ~~~vvvgLSGGvDSsv~a~La~~a~~~lg~~~~~~~v~av~~~~~~~~d~~~A~~va~~lgi~~~~~i~ 106 (271)
T 1kqp_A 38 AKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQQDEDDAQLALKFIKPDKSWKFD 106 (271)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSSSCTTHHHHHHHHHHHCCSEEEECC
T ss_pred CCCEEEECCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEEeCCCCCCCHHHHHHHHHhcCCCeEEEec
Confidence 34899999998 4555443322111111 1 3677777654111 11357888999999 888876
No 398
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=20.16 E-value=93 Score=29.45 Aligned_cols=67 Identities=15% Similarity=0.204 Sum_probs=34.9
Q ss_pred CeeEEEEeeCC-hhHHHHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhC---CCCEEEeCCCCCChHHHHHHHHh
Q 023530 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH---GIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 128 ~~rIavl~Sg~-GsnL~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~---gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
++||+|++.|. |+++-..+.. .| .+| ++.|+ ....+.+.++++ |+. ... +. +++.+.++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~--~G---~~V--~v~dr---~~~~~~~l~~~~~~~gi~--~~~----s~-~e~v~~l~ 67 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVES--RG---YTV--AIYNR---TTSKTEEVFKEHQDKNLV--FTK----TL-EEFVGSLE 67 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHH--TT---CCE--EEECS---SHHHHHHHHHHTTTSCEE--ECS----SH-HHHHHTBC
T ss_pred CCcEEEEeeHHHHHHHHHHHHh--CC---CEE--EEEcC---CHHHHHHHHHhCcCCCeE--EeC----CH-HHHHhhcc
Confidence 46899999998 6666544432 34 354 34565 223344455554 431 111 11 22222223
Q ss_pred CCCEEEEe
Q 023530 204 NTDFLVLA 211 (281)
Q Consensus 204 ~~DlIVLA 211 (281)
++|+|+++
T Consensus 68 ~aDvVila 75 (474)
T 2iz1_A 68 KPRRIMLM 75 (474)
T ss_dssp SSCEEEEC
T ss_pred CCCEEEEE
Confidence 48888886
No 399
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=20.09 E-value=3.8e+02 Score=22.79 Aligned_cols=73 Identities=15% Similarity=0.107 Sum_probs=35.0
Q ss_pred CCeeEEEEeeCC--hhHH-HHHHHhhhcCCCCeeEEEEEeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHHh
Q 023530 127 PKYKVAVLASKQ--EHCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (281)
Q Consensus 127 ~~~rIavl~Sg~--GsnL-~aLl~~~~~g~l~~eI~~Visn~pd~~~a~~~~~A~~~gIP~~~i~~k~~~~e~~l~~~L~ 203 (281)
.+|||.|.+..+ |+.+ +.|++ .| .+|.++.-+ ++ .. .++ ...++.++..+- .+.+.+.++++
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~---~g---~~V~~~~r~-~~--~~--~~l-~~~~~~~~~~Dl---~d~~~~~~~~~ 76 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRA---AG---HDLVLIHRP-SS--QI--QRL-AYLEPECRVAEM---LDHAGLERALR 76 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHH---TT---CEEEEEECT-TS--CG--GGG-GGGCCEEEECCT---TCHHHHHHHTT
T ss_pred cCCEEEEECCCcHHHHHHHHHHHH---CC---CEEEEEecC-hH--hh--hhh-ccCCeEEEEecC---CCHHHHHHHHc
Confidence 345666665433 3333 34444 34 477765443 22 11 111 223666666541 12345667777
Q ss_pred CCCEEEE-eccc
Q 023530 204 NTDFLVL-ARYM 214 (281)
Q Consensus 204 ~~DlIVL-AgYM 214 (281)
++|.||- ||+.
T Consensus 77 ~~d~vih~a~~~ 88 (342)
T 2x4g_A 77 GLDGVIFSAGYY 88 (342)
T ss_dssp TCSEEEEC----
T ss_pred CCCEEEECCccC
Confidence 8998885 4543
Done!