BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023538
(281 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1
Length = 282
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/282 (70%), Positives = 237/282 (84%), Gaps = 1/282 (0%)
Query: 1 MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
MYRFSNTVIG LNL TLLASIPIIG L+ ARSSTTCE+FLQTPLLVIGF++LI+SLAGF
Sbjct: 1 MYRFSNTVIGVLNLLTLLASIPIIGTALYKARSSTTCENFLQTPLLVIGFIILIVSLAGF 60
Query: 61 IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
IGACFNVAWALWVYLVVM+FLIATLM LT+FG VVTS+GGGV+VPGR+YKEY L DY PW
Sbjct: 61 IGACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPW 120
Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
LR RV+DP YW++IRSC+L SKTC K+ WT LDY +RDMT +QSGCCKPPT+C Y
Sbjct: 121 LRERVRDPEYWNSIRSCILSSKTCTKIESWTTLDYFQRDMTSVQSGCCKPPTACTYEAGV 180
Query: 181 MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCCA 240
+ DC+RWNN +LCYECD+CKAGVLE++R DW KLSV+NI++LV+LI +Y+ GCCA
Sbjct: 181 VDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYAAGCCA 240
Query: 241 FQNTRRAQTDY-PYGENQMTKVRPRWDYYWWRWWKDTRERLW 281
F NTR A Y P +N+MT+VRPRWDYYWWRWW + +E+L+
Sbjct: 241 FHNTRHAAHPYHPSDDNRMTRVRPRWDYYWWRWWHEKKEQLY 282
>sp|Q84WF6|TET5_ARATH Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1
Length = 281
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/281 (62%), Positives = 224/281 (79%), Gaps = 3/281 (1%)
Query: 1 MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
M R SNTVIGFLN+ TL++SI ++G+ LWM RS TTCE FLQ PLL++G +LI+S+AG
Sbjct: 1 MNRMSNTVIGFLNILTLISSIVLLGSALWMGRSKTTCEHFLQKPLLILGLAILILSVAGL 60
Query: 61 IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
+GAC +VAW LWVYL M+F+I LM LT+FGF+VTS GGV V GRVYKE+ L+ Y PW
Sbjct: 61 VGACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGVVVDGRVYKEFKLEAYHPW 120
Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
L+ RV D NYW TI++CLLGS TC+KLALWTPLDYL++D++P+QSGCCKPPTSC YN T
Sbjct: 121 LKTRVVDTNYWVTIKTCLLGSVTCSKLALWTPLDYLQKDLSPLQSGCCKPPTSCVYNTDT 180
Query: 181 -MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCC 239
+ QDPDCYRWNNA T+LCY+CD+C+AGVLE VRRDWHKLS++N+++++ LI +Y +GCC
Sbjct: 181 VIQQDPDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYCVGCC 240
Query: 240 AFQNTRRAQT-DYPYGENQMTKVRPRWDYYWWRWWKDTRER 279
AF+N +R Q +PYG M+K RP W+ W RWW R+R
Sbjct: 241 AFKNAKRPQHYGFPYGRYGMSKSRPGWEQSWSRWWHG-RDR 280
>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1
Length = 272
Score = 248 bits (632), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 112/271 (41%), Positives = 171/271 (63%), Gaps = 14/271 (5%)
Query: 1 MYRFSNTVIGFLNLFTLLASIPIIGAGLWMA-RSSTTCESFLQTPLLVIGFVVLIISLAG 59
M RFSN+++G LN F L S+PI+ G+W++ +++T CE FL P++ +G ++II++AG
Sbjct: 1 MVRFSNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAG 60
Query: 60 FIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSP 119
+G+C V W LW YL VM FLI ++ TIF FVVTS+G G + G+ YKEY L+ YS
Sbjct: 61 VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 120
Query: 120 WLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTP----LDYLERDMTPIQSGCCKPPTSCN 175
WL+ RV + +W++IRSCL SK C L L T D+ + D+T +SGCCKP C+
Sbjct: 121 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDCD 180
Query: 176 YNMPTMA---------QDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVM 226
+ T ++ DC W+N LCY C +CKAG L++++ W +++++NI+
Sbjct: 181 FTYITSTTWNKTSGTHKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIF 240
Query: 227 LVVLIGIYSIGCCAFQNTRRAQTDYPYGENQ 257
LV+L+ +Y++GCCAF+N + + G N
Sbjct: 241 LVLLVVVYAMGCCAFRNNKEDRYGRSNGFNN 271
>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1
Length = 285
Score = 248 bits (632), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/279 (43%), Positives = 174/279 (62%), Gaps = 18/279 (6%)
Query: 3 RFSNTVIGFLNLFTLLASIPIIGAGLWMAR--SSTTCESFLQTPLLVIGFVVLIISLAGF 60
R SN +IG +N T L SIPI+G G+W++ +ST C FLQ PL+VIG ++++SLAGF
Sbjct: 2 RTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGF 61
Query: 61 IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
GAC+ + +W+YLVVML +IA L+ IF + VT +G G V R Y +Y+L+DYS W
Sbjct: 62 AGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGW 121
Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLAL------WTPLDYLERDMTPIQSGCCKPPTSC 174
L++RV D +YW I SCL S C K+ T + R ++P++SGCCKPPT C
Sbjct: 122 LKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDC 181
Query: 175 NYNMPT----------MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNI 224
++ + + DC W+N ++LCY+C SCKAGVL +++ W K+SV+NI
Sbjct: 182 GFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINI 241
Query: 225 VMLVVLIGIYSIGCCAFQNTRRAQTDYPYGENQMTKVRP 263
V+L++L+ Y I A++N +R D P GE +MTK P
Sbjct: 242 VVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHP 280
>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1
Length = 273
Score = 244 bits (623), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 114/264 (43%), Positives = 169/264 (64%), Gaps = 15/264 (5%)
Query: 1 MYRFSNTVIGFLNLFTLLASIPIIGAGLWMA-RSSTTCESFLQTPLLVIGFVVLIISLAG 59
M R SN ++G LN L SIPI+ G+W++ + ST CE FL P++ +G ++++++AG
Sbjct: 1 MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60
Query: 60 FIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSP 119
IG+C V W LWVYL VM LI + +T+F FVVT++G G + G+ YKEY L DYS
Sbjct: 61 LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYST 120
Query: 120 WLRNRVKDPNYWSTIRSCLLGSKTCAKLA---LWTPLD-YLERDMTPIQSGCCKPPTSCN 175
WL+ RV++ W+ IRSCL+ SK C+KL + P++ + + +T +QSGCCKP C
Sbjct: 121 WLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECG 180
Query: 176 YN----------MPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIV 225
+ +PDC W+NA LC++C SCKAG+L++V+ W K++++NIV
Sbjct: 181 FEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIV 240
Query: 226 MLVVLIGIYSIGCCAFQNTRRAQT 249
LV LI +YS+GCCAF+N +R +
Sbjct: 241 FLVFLIIVYSVGCCAFRNNKRDDS 264
>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1
Length = 263
Score = 237 bits (605), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 163/260 (62%), Gaps = 14/260 (5%)
Query: 1 MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTT-CESFLQTPLLVIGFVVLIISLAG 59
M + SN ++G LN FT L SIPI+ AG+W+ +++ T CE FL P++V+G ++ +S+AG
Sbjct: 1 MVQCSNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAG 60
Query: 60 FIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSP 119
+GAC V+ LW+YL M LI TIF F VT+RG G + R YKEYH+ DYS
Sbjct: 61 LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSN 120
Query: 120 WLRNRVKDPNYWSTIRSCLLGSKTCA----KLALWTPLDYLERDMTPIQSGCCKPPTSCN 175
WL+ RV + W IRSCL+ S C+ + A D+ + ++ +QSGCCKP CN
Sbjct: 121 WLQKRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCN 180
Query: 176 Y---------NMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVM 226
+ P ++ DC W+N P LCY+C++CKAG+L++++ W K++ +NIV
Sbjct: 181 FTYVNPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVF 240
Query: 227 LVVLIGIYSIGCCAFQNTRR 246
L+ LI +YS+GCCAF+N R+
Sbjct: 241 LIFLIIVYSVGCCAFRNNRK 260
>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1
Length = 327
Score = 211 bits (538), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/277 (43%), Positives = 171/277 (61%), Gaps = 18/277 (6%)
Query: 3 RFSNTVIGFLNLFTLLASIPIIGAGLWMAR--SSTTCESFLQTPLLVIGFVVLIISLAGF 60
R + +IG +N FT L SIPI+G G+W++ +ST C FLQ PL++IG +++ISLAG
Sbjct: 2 RSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGI 61
Query: 61 IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
GAC+ + +W+YL M F+IA L+ TIF +VVT +G G V R Y +Y+L DYS W
Sbjct: 62 AGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGW 121
Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLAL------WTPLDYLERDMTPIQSGCCKPPTSC 174
L++RV D YW I SC+ S C K+ T + R+++P++SGCCKPPT C
Sbjct: 122 LKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDC 181
Query: 175 NYNM----------PTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNI 224
Y + +PDC WNN LLCY+C SCKAGVL +++ W K+SV+NI
Sbjct: 182 GYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINI 241
Query: 225 VMLVVLIGIYSIGCCAFQNTRRAQTDYPYGENQMTKV 261
V++++L+ Y I C A+QN +R D P GE +MT +
Sbjct: 242 VVVIILVIFYVIACAAYQNVKRMYNDEPVGEARMTNL 278
>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1
Length = 271
Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 150/267 (56%), Gaps = 20/267 (7%)
Query: 1 MYRFSNTVIGFLNLFTLLASIPIIGAGLWM--ARSSTTCESFLQTPLLVIGFVVLIISLA 58
M+R SN ++G N +L IG ++M + T CES ++ PLL G ++ ++SL
Sbjct: 1 MFRVSNFMVGLANTLVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLL 60
Query: 59 GFIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYS 118
G IG+CF A+ YL+++ I LM +IF F VT++G G V GR YKEY D+S
Sbjct: 61 GVIGSCFKENLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFS 120
Query: 119 PWLRNRVKDPNYWSTIRSCLLGSKTCAKLA----LWTPLDYLERDMTPIQSGCCKPPTSC 174
WL V W IRSCL + C L+ + ++++PIQSGCCKPP+ C
Sbjct: 121 TWLNGFVGGKR-WVGIRSCLAEANVCDDLSDGRVSQIADAFYHKNLSPIQSGCCKPPSDC 179
Query: 175 NY-------------NMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSV 221
N+ N +A++ DC W+N T LC+ C++CKAGVL ++R W L V
Sbjct: 180 NFEFRNATFWIPPSKNETAVAENGDCGTWSNVQTELCFNCNACKAGVLANIREKWRNLLV 239
Query: 222 LNIVMLVVLIGIYSIGCCAFQNTRRAQ 248
NI +L++LI +YS GCCA +N R A+
Sbjct: 240 FNICLLILLITVYSCGCCARRNNRTAR 266
>sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1
Length = 269
Score = 195 bits (495), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/265 (43%), Positives = 156/265 (58%), Gaps = 12/265 (4%)
Query: 4 FSNTVIGFLNLFTLLASIPIIGAGLWMARSS-TTCESFLQTPLLVIGFVVLIISLAGFIG 62
SN VIG +N T+L SIP+IGAG+W+A + +C LQ P++++G ++L++ LAGFIG
Sbjct: 3 LSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGFIG 62
Query: 63 ACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLR 122
+ + W L VYL+ ML LI L L F ++VT RG G P R Y EY LQD+S WLR
Sbjct: 63 GFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGWLR 122
Query: 123 NRVKDPNYWSTIRSCLLGSKTCAKLALWTPL--DYLERDMTPIQSGCCKPPTSCNYNM-- 178
RV+ W IR+CL + C +L L D+ + PIQSGCCKPPT C +
Sbjct: 123 RRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTFVN 182
Query: 179 PT-------MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLI 231
PT M+ D DC W+N LCY CDSCKAG+L +++ DW K + ++ L+ LI
Sbjct: 183 PTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIGLI 242
Query: 232 GIYSIGCCAFQNTRRAQTDYPYGEN 256
+Y IGCCAF+N Y +
Sbjct: 243 IVYIIGCCAFRNAETEDIFRKYKQG 267
>sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1
Length = 270
Score = 185 bits (469), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 157/260 (60%), Gaps = 16/260 (6%)
Query: 4 FSNTVIGFLNLFTLLASIPIIGAGLWMA-RSSTTCESFLQTPLLVIGFVVLIISLAGFIG 62
+N + LNL LL SIPI +G+W+A + C + L+ P++V+G ++L++S GFIG
Sbjct: 3 LANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGFIG 62
Query: 63 ACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLR 122
A L VYL M LI L+ + IF FVVT G +VPGR YKEY L+ +S WL+
Sbjct: 63 AYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNWLK 122
Query: 123 NRVKDPNYWSTIRSCLLGSKTCAKLA---LWTPLDYLERDMTPIQSGCCKPPTSCNYNM- 178
V D W +R+CL + C KL + + +TP+QSGCCKPPT+C YN
Sbjct: 123 ENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYNFV 182
Query: 179 -PT-------MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVL 230
PT MA D DCY W+N + LCY C+SCKAG+L ++R++W K +++ I+ +VVL
Sbjct: 183 NPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVVVL 242
Query: 231 IGIYSIGCCAFQNTRRAQTD 250
I +Y I C AF+N AQT+
Sbjct: 243 IWVYVIACSAFRN---AQTE 259
>sp|F4I214|TET10_ARATH Tetraspanin-10 OS=Arabidopsis thaliana GN=TET10 PE=2 SV=1
Length = 284
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 144/240 (60%), Gaps = 12/240 (5%)
Query: 5 SNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGAC 64
S VI ++NL T+L ++ +I G+WM+ + C L P++ +G + +IS+ GF+GAC
Sbjct: 6 STFVIRWVNLLTMLLAVAVIIFGVWMSTHNDGCRRSLTFPVIALGGFIFLISIIGFLGAC 65
Query: 65 FNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRNR 124
LW+YL V+L ++ ++ T+ F+VT+ G G PG YKEY L DYS W +
Sbjct: 66 KRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSWFLKQ 125
Query: 125 VKDPNYWSTIRSCLLGSKTCAKLA-LWTPLDYLER-DMTPIQSGCCKPPTSCNY------ 176
+ + + W ++SCL+ S+ C KL+ + + L+ ++TPI++GCC+PP+ C Y
Sbjct: 126 LNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYPAVNAS 185
Query: 177 ----NMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIG 232
+ +++ + DC + N T+ CY CDSCKAGV + ++ +W +++ N+V+ VVLI
Sbjct: 186 YYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFNVVLFVVLIS 245
>sp|Q9SI56|TET13_ARATH Tetraspanin-13 OS=Arabidopsis thaliana GN=TET13 PE=3 SV=1
Length = 278
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 119/250 (47%), Gaps = 18/250 (7%)
Query: 5 SNTVIGFLNLFTLLASIPIIGAGLWMARSST------TCESFLQTPLLVIGFVVLIISLA 58
N F +F + ++I ++ A W T C F+ TP + I F +L +SL
Sbjct: 17 QNMSFPFNTIFLISSAIFLVTAAFWFVAVMTLHYRTDECNRFVTTPGIFISFSLLAMSLT 76
Query: 59 GFIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYS 118
GF A F ++ + + +++ IF + PG E+ +DYS
Sbjct: 77 GFYAAYFKSDCLFRIHFFIFFLWMFVVVSKAIFVIFLHKETNPRLFPGTKIYEFRYEDYS 136
Query: 119 PWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPL-DYLERDMTPIQSGCCKPPTSC--N 175
W+ V + W R CL+ C +L P ++ + ++TPIQSGCCKPP SC N
Sbjct: 137 GWVSRLVIKDDEWYRTRRCLVKDNVCNRLNHKMPASEFYQMNLTPIQSGCCKPPLSCGLN 196
Query: 176 YNMP---TMAQ-----DPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVML 227
Y P T+++ + DC RWNN+ LC++CDSCKA ++ DV ++V NI+ +
Sbjct: 197 YEKPNNWTVSRYYNNLEVDCKRWNNSADTLCFDCDSCKAVIIADVHNTSFSITV-NIIHI 255
Query: 228 VVLIGIYSIG 237
+ + I G
Sbjct: 256 IFSLCIGMTG 265
>sp|Q9FN51|TET12_ARATH Tetraspanin-12 OS=Arabidopsis thaliana GN=TET12 PE=2 SV=1
Length = 264
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 125/257 (48%), Gaps = 13/257 (5%)
Query: 1 MYRFSNTVIGFLNLFTLLASIPIIGAGLWM-ARSSTTCESFLQTPLLVIGFVVLIISLAG 59
M R SN + N L + + +++ + + C+ F+Q PL+V ++ IS G
Sbjct: 1 MLRLSNAAVITTNAILALIGLAALSFSVYVYVQGPSQCQRFVQNPLIVTAALLFFISSLG 60
Query: 60 FIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSP 119
I A + + +YL + I L+ L++F F+VT+ G + GR DY
Sbjct: 61 LIAALYGSHIIITLYLFFLFLSILLLLVLSVFIFLVTNPTAGKALSGRGIGNVKTGDYQN 120
Query: 120 WLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYN-- 177
W+ N W I CL S+ C + +D+ + ++ +Q GCC+PP C +
Sbjct: 121 WIGNHFLRGKNWEGITKCLSDSRVCKRFGP-RDIDFDSKHLSNVQFGCCRPPVECGFESK 179
Query: 178 ---------MPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLV 228
T A DC W+N LCY C+SCK GVL+ +R+ W L V+N+++++
Sbjct: 180 NATWWTVPATATTAIIGDCKAWSNTQRQLCYACESCKIGVLKGIRKRWRILIVVNLLLIL 239
Query: 229 VLIGIYSIGCCAFQNTR 245
+++ +YS GCC +N R
Sbjct: 240 LVVFLYSCGCCVRKNNR 256
>sp|Q1PDI1|TET15_ARATH Tetraspanin-15 OS=Arabidopsis thaliana GN=TET15 PE=2 SV=1
Length = 317
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 41/252 (16%)
Query: 10 GFLNLFTLLASIPIIGAGLWMA-RSSTTCESFLQTPLLVIGFVVLIISLAGFIGACFNVA 68
G L +FT + S+ ++G +W+ S CE L P V ++ G +
Sbjct: 60 GVLPIFTFVLSLTLLGYAVWLLYMRSYDCEDILGLPR------VQTLASVGLLAVFVVSN 113
Query: 69 WALWVYLVV-MLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRNRVKD 127
AL++ M L+ ++ L + F+ + G ++ R + + W + ++ D
Sbjct: 114 AALFLRRKFPMPALVVMVVVLLLMLFIGLAYAGVNEMQSRRFPATRM-----WFKLKIMD 168
Query: 128 PNY-WSTIRSCLLGSKTCAKLALWTPLD--YLERDMTPIQSGCCKPPTSCNYN------- 177
+ W+ I+SC+ C L +P + Y R M PI++GCC PP +CN +
Sbjct: 169 DHVTWNNIKSCVYDKGACNDLIYGSPNEKPYNRRKMPPIKNGCCMPPETCNMDAINATFW 228
Query: 178 -----------MPTMAQDP-------DCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKL 219
M M D DC W N ++LCY+C SCK G + VRR W +L
Sbjct: 229 YRRKDEGPPSSMNLMYGDEMMVGRISDCQLWRNDWSILCYDCRSCKFGFIRSVRRKWWQL 288
Query: 220 SVLNIVMLVVLI 231
+ IV+ ++L+
Sbjct: 289 GIFLIVISILLL 300
>sp|Q5BQ04|TET16_ARATH Tetraspanin-16 OS=Arabidopsis thaliana GN=TET16 PE=2 SV=1
Length = 248
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 89/232 (38%), Gaps = 30/232 (12%)
Query: 5 SNTVIGFLNLFTLL---ASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFI 61
S GFL + T++ + + G GL+ ++ + C +VIG ++L+I
Sbjct: 2 SEIRTGFLTMATIILICIGLTMTGTGLYYRKTVSKCIRETDGSFVVIGLLLLVIPQFALY 61
Query: 62 GACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWL 121
C + +Y+ M+F+ L ++ F+ + G + P + + L
Sbjct: 62 AICCHSKRMFTIYIYAMIFVSIVLGGYSLKCFIYNTTFGIAKNPAEEKRT------AKQL 115
Query: 122 RNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPTM 181
R+ + + + C++ + C ++ + + CC P C + TM
Sbjct: 116 VGRLVPESKLAKVTECIIHNHDC---------NFNASQNSNVWRYCCAQPRGC--GVTTM 164
Query: 182 AQDPDCYRW------NNAPTLLCYE----CDSCKAGVLEDVRRDWHKLSVLN 223
P + W N+ P YE C C+ +L+ + W LS+ +
Sbjct: 165 FGQPGEWSWKHQHVENHVPEECSYEYCLSCRGCQMSILKAIVHQWKYLSMFS 216
>sp|Q58G35|TET17_ARATH Tetraspanin-17 OS=Arabidopsis thaliana GN=TET17 PE=2 SV=1
Length = 248
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 87/238 (36%), Gaps = 30/238 (12%)
Query: 5 SNTVIGFLNLFTLL---ASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFI 61
S GFL + T++ + ++G GL+ + ++C + ++G ++L+I G
Sbjct: 2 SEVRTGFLTMTTIILISIGLTMMGTGLYQKTTMSSCIRETSSQFTLLGLLLLLIPQIGLY 61
Query: 62 GACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWL 121
G C + M+ LI + +I + + G + P + + P L
Sbjct: 62 GICCRSKRLFNFFFYGMVVLIIIVSYYSIKCSIYNTTFGIAKNPAKDNRTV------PQL 115
Query: 122 RNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPTM 181
R+ + + C++ C +Y + + CC P C TM
Sbjct: 116 LGRLVSKEKFEKVTYCIIHKHDC---------NYNASKNSNVWKYCCAQPVGC--GTITM 164
Query: 182 AQDPDCYRW------NNAPTLLCYE----CDSCKAGVLEDVRRDWHKLSVLNIVMLVV 229
P + W N P YE C C+ +L+ + W LS+ LV+
Sbjct: 165 FDKPGEWSWKHQYERNQVPEECSYEYCLDCRGCQLSILKAIVHQWKYLSMFAYPALVL 222
>sp|Q9ZJ66|SECD_HELPJ Protein translocase subunit SecD OS=Helicobacter pylori (strain
J99) GN=secD PE=3 SV=1
Length = 526
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 73/187 (39%), Gaps = 29/187 (15%)
Query: 23 IIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGACFNVAWALWVYLVVMLFLI 82
I+G L T+ + + +LV+GF+ L S+AG I AC + L++ + VM
Sbjct: 342 IVGPSLGKDSIKTSIIALVGGFILVMGFMALYYSMAGVI-ACMALVVNLFLIVAVMAIFG 400
Query: 83 ATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRNRVK--------------DP 128
ATL + G V+T G+ V + +++ VK D
Sbjct: 401 ATLTLPGMAGIVLTV---GIAVDANIIINERIREVLREGEGVVKAIHLGYINASRAIFDS 457
Query: 129 NYWSTIRSCLL---GSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYN--MPTMAQ 183
N S I S LL G+ AL T + L +T I T Y +P +AQ
Sbjct: 458 NITSLIASVLLYAYGTGAIKGFALTTGIGILASIITAIIG------TQGIYQALLPKLAQ 511
Query: 184 DPDCYRW 190
Y W
Sbjct: 512 TKSLYFW 518
>sp|O26074|SECD_HELPY Protein translocase subunit SecD OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=secD PE=3 SV=2
Length = 525
Score = 35.4 bits (80), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 74/189 (39%), Gaps = 33/189 (17%)
Query: 23 IIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGACFNVAWALWVYLVVMLFLI 82
IIG L T+ + + +LV+GF+VL S+AG I AC + L++ + VM
Sbjct: 342 IIGPSLGKDSVKTSIIALVGGFILVMGFMVLYYSMAGVI-ACLALVVNLFLIVAVMAIFG 400
Query: 83 ATLMALTIFGFVVTSRGGGVQVPGRVY----------------KEYHLQDYSPWLRNRVK 126
ATL + G V+T G+ V + K HL Y R +
Sbjct: 401 ATLTLPGMAGIVLTV---GIAVDANIIINERIREVLRENEGIAKAIHL-GYINASR-AIF 455
Query: 127 DPNYWSTIRSCLL---GSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYN--MPTM 181
D N S I S LL G+ AL T + L +T I T Y +P +
Sbjct: 456 DSNITSLIASVLLYAYGTGAIKGFALTTGIGILASIITAIVG------TQGIYQALLPKL 509
Query: 182 AQDPDCYRW 190
Q Y W
Sbjct: 510 TQTKSLYFW 518
>sp|P27701|CD82_HUMAN CD82 antigen OS=Homo sapiens GN=CD82 PE=1 SV=1
Length = 267
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Query: 23 IIGAGLWMARSSTTCESFLQTP----------LLVIGFVVLIISLAGFIGACFNVAWALW 72
I+G G+W+ ++ S LQT + +G V +++ G IGA V L
Sbjct: 27 ILGFGVWILADKSSFISVLQTSSSSLRMGAYVFIGVGAVTMLMGFLGCIGAVNEVRCLLG 86
Query: 73 VYLV-VMLFLIATLMALTIF----GFVVTSRGGGVQVPGRVY---KEYHLQDYSPWLRNR 124
+Y ++L LIA + A +F G + GG V R Y +E LQD +++ +
Sbjct: 87 LYFAFLLLILIAQVTAGALFYFNMGKLKQEMGGIVTELIRDYNSSREDSLQDAWDYVQAQ 146
Query: 125 VK 126
VK
Sbjct: 147 VK 148
>sp|Q04561|RPOA_PRRSL Replicase polyprotein 1ab OS=Porcine reproductive and respiratory
syndrome virus (strain Lelystad) GN=rep PE=1 SV=3
Length = 3855
Score = 32.0 bits (71), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 13 NLFTLLASIPIIGAGLWMARSSTTCESFLQ--------TPLLVIGFVVL------IISLA 58
+L +LLAS+P++ GL + C FL TP++ +GF +L ++ A
Sbjct: 1884 DLASLLASVPVVEGGLSTVQ--LLCVFFLLWRMMGHAWTPIVAVGFFLLNEILPAVLVRA 1941
Query: 59 GFIGACFNVAWAL-WVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRV 108
F A F +AWA W V+M+ L+ + + GG V + +
Sbjct: 1942 VFSFALFVLAWATPWSAQVLMIRLLTASLNRNKLSLAFYALGGVVGLAAEI 1992
>sp|A0MD28|RPOA_PRRSS Replicase polyprotein 1ab OS=Porcine reproductive and respiratory
syndrome virus (isolate Pig/United States/SD 01-08/2001)
PE=1 SV=2
Length = 3838
Score = 31.2 bits (69), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 13 NLFTLLASIPIIGAGLWMARSSTTCESFLQ--------TPLLVIGFVVL------IISLA 58
+L +LLAS+P++ GL + C FL TP++ +GF +L ++ A
Sbjct: 1867 DLASLLASVPVMEGGLSTVQ--LLCVFFLLWRMMGHAWTPIVAVGFFLLNEILPAVLVRA 1924
Query: 59 GFIGACFNVAWAL-WVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRV 108
F A F +AWA W V+M+ L+ + + GG V + +
Sbjct: 1925 VFSFALFILAWATPWSAQVLMIRLLTASLNRNKLSLAFYALGGVVGLAAEI 1975
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.140 0.491
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,152,173
Number of Sequences: 539616
Number of extensions: 4296937
Number of successful extensions: 13108
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 13032
Number of HSP's gapped (non-prelim): 73
length of query: 281
length of database: 191,569,459
effective HSP length: 116
effective length of query: 165
effective length of database: 128,974,003
effective search space: 21280710495
effective search space used: 21280710495
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)