Query         023541
Match_columns 281
No_of_seqs    185 out of 1298
Neff          6.6 
Searched_HMMs 29240
Date          Mon Mar 25 08:35:49 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023541.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023541hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1r61_A Metal-dependent hydrola 100.0 1.6E-56 5.3E-61  394.8  19.7  202   64-281     2-204 (207)
  2 2b0a_A Hypothetical protein MJ 100.0 2.1E-49 7.1E-54  344.1  15.5  180   66-281     1-185 (186)
  3 2ab1_A Hypothetical protein; H  55.8      21 0.00073   27.8   5.6   56  152-221    43-98  (122)
  4 2fvt_A Conserved hypothetical   46.2      27 0.00091   27.7   4.8   59  150-222    45-104 (135)
  5 2fi9_A Outer membrane protein;  32.6      36  0.0012   26.6   3.5   57  151-222    48-105 (128)
  6 3cpk_A Uncharacterized protein  29.1      84  0.0029   25.4   5.2   57  152-222    46-125 (150)
  7 2gm2_A Conserved hypothetical   25.2      25 0.00085   27.8   1.3   54  154-222    48-101 (132)
  8 3iwh_A Rhodanese-like domain p  20.5 1.5E+02  0.0052   21.5   4.9   16  200-216    69-84  (103)
  9 4pga_A Glutaminase-asparaginas  19.6   1E+02  0.0035   28.1   4.4   51  194-246   228-279 (337)
 10 1agx_A Glutaminase-asparaginas  19.4 1.2E+02  0.0041   27.4   4.9   51  194-246   222-274 (331)

No 1  
>1r61_A Metal-dependent hydrolase; zinc-dependent hydrolase, structural genomics, cyclase, PSI, protein structure initiative; 2.50A {Geobacillus stearothermophilus} SCOP: c.8.8.1 PDB: 3krv_A
Probab=100.00  E-value=1.6e-56  Score=394.84  Aligned_cols=202  Identities=31%  Similarity=0.530  Sum_probs=181.7

Q ss_pred             CCEEEEcceecCCCCCCCCCCCCCeeeeecceeccCCCeeeeeeEEecCCcccccccccccccCcccCCcccccccccce
Q 023541           64 NGQIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDTLDLGVL  143 (281)
Q Consensus        64 ~~~iiDLS~~i~~~mP~~p~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~HtGTHiDAP~H~~~~~~~~G~~id~l~l~~~  143 (281)
                      ++|+|||||+++++||+||++++++.  ....+.++ + +|.+.++|++|+|||+|||+||.    ++|.+++++|++.|
T Consensus         2 ~m~~iDLs~~i~~~~p~~pg~~~~~~--~~~~~~~~-~-~~~~~i~~~~H~GTH~Dap~H~~----~~g~~i~~~pl~~~   73 (207)
T 1r61_A            2 AMKVYDVTAPIYEGMPVYKNKPEKQP--KRTTITNG-Y-VTESRIDMDVHTGTHIDAPLHMV----EGGATFETIPLNDL   73 (207)
T ss_dssp             CCCEEECCCCBCTTCCCGGGCGGGSC--EEEEEEET-T-EEEEEEEEETTSSSEEECCGGGS----CSSCTTCCCCCTTT
T ss_pred             CCEEEECcCcccCCCCCCCCCCCeEE--EEeeecCC-c-eEEeEEEECCCCchhhchHhhcC----CCCcChhhCChhHc
Confidence            46899999999999999999987643  22233344 3 99999999999999999999999    79999999999999


Q ss_pred             eccEEEEEcCCC-ccCCHHHHhcCCCCCCCeEEEEEeccCcccccccccccCCCcccCHHHHHHHHhCCCceEEeecCCC
Q 023541          144 NGPALLVDVPRD-KNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLS  222 (281)
Q Consensus       144 ~g~avvlDv~~~-~~It~edle~~~i~~g~d~VL~rTG~~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~~V~~VGiD~~S  222 (281)
                      +|||||||+++. ..||.+||++++|++| |+|||||||++     +++|..++||+++|+|+||+++ +|++||+|++|
T Consensus        74 ~g~~vviD~~~~~~~It~~dl~~~~i~~g-d~vlirTg~~~-----~~~y~~~~pgls~eaa~~L~~~-~v~~vG~D~~s  146 (207)
T 1r61_A           74 VGPCKLFDLTHVNDRITKDDIAHLDIQEG-DFVLFKTKNSF-----EDAFHFEFIFVAEDAARYLADK-QIRGVGIDALG  146 (207)
T ss_dssp             EEEEEEEECTTCCSEECHHHHTTSCCCTT-CEEEEECGGGG-----CCSCCTTCCEECHHHHHHHHHH-TCSEEECSSSC
T ss_pred             cceEEEEEEeCCCCccCHHHHHhccCCCC-cEEEEECCCCC-----chhhcCCCcccCHHHHHHHHHC-CCCEEEEcCCc
Confidence            999999999864 4799999999999888 89999999975     4567788999999999999995 99999999999


Q ss_pred             cCCCCCCcHhHHhhhhCCCeeEEEcccCCCCCCCcEEEEEeccccCCCCccceeeEEEC
Q 023541          223 AAAHDDLLPSHYEFLEGREVILVEGLKLDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK  281 (281)
Q Consensus       223 vd~~~~~~p~H~~lL~~~gI~iiE~LnLd~L~~~~~~~~a~PLki~Ga~GsPvR~vAi~  281 (281)
                      +|+.+...++|+.||+ +||+|+|||+|++|++++|+|+|+||||+|++|||||+||++
T Consensus       147 ~d~~~~~~~~H~~ll~-~gi~iiE~l~L~~L~~~~f~l~~~Plki~g~~gsPvR~vAi~  204 (207)
T 1r61_A          147 IERAQEGHPTHKTLFS-AGVIIIEGLRLKDVPEGRYFMVAAPLKLVGTDAAPARVLLFD  204 (207)
T ss_dssp             SCCSCTTCHHHHHHHH-TTCEEEESCCCTTCCSEEEEEEEEECCBTTCSEEEEEEEEEC
T ss_pred             cCCCCCCCHHHHHHHH-cCCeEEEEeEhhcCCCCcEEEEEECccCCCCcccCeeEEEEe
Confidence            9987533399999996 899999999999999999999999999999999999999985


No 2  
>2b0a_A Hypothetical protein MJ0783; structural genomics, PSI, protein STRU initiative; 1.45A {Methanocaldococcus jannaschii} SCOP: c.8.8.1
Probab=100.00  E-value=2.1e-49  Score=344.14  Aligned_cols=180  Identities=22%  Similarity=0.301  Sum_probs=159.0

Q ss_pred             EEEEcceecCCCCCCCCCCCCCeeeeecceeccCCCeeeeeeEEecCCcccccccccccccCcccCCccccc-ccccc--
Q 023541           66 QIYDITHRITSDMPSFGSKEGLGQYLWLPKSIKNGSLANNSEMKLPSHTGTHVDAPGHVFDHYFDAGYDVDT-LDLGV--  142 (281)
Q Consensus        66 ~iiDLS~~i~~~mP~~p~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~HtGTHiDAP~H~~~~~~~~G~~id~-l~l~~--  142 (281)
                      |+||||||+++  |+||++++++...     .+++ .+|.+.++|++|+|||+|||+||.         +++ +|++.  
T Consensus         1 ~~iDLs~~i~~--p~~pg~~~~~~~~-----~~~~-g~~~~~i~~~~H~GTHiDap~H~~---------id~~ipl~~g~   63 (186)
T 2b0a_A            1 EILDLTQTLIN--FPRPGDPELRIIE-----KKID-GFIVSEIIMGSHLCTHIDYPKHVG---------LENRIPFKDGI   63 (186)
T ss_dssp             CEEECBCCCCS--CCCTTSCCCEEEE-----EEET-TEEEEEEECCTTSSSEEECGGGGT---------CCCCCSSGGGC
T ss_pred             CEEEeeeEecC--CcCCCCCCcEEEE-----ecCC-cEEEEEEEecCCcccCccchhhee---------ecccccCCCCe
Confidence            58999999998  9999998875322     2222 389999999999999999999984         899 99999  


Q ss_pred             eeccEEEEEcCCCccCCHHHHhcCCCCCCCeEEEEEeccCcccccccccccCCCcccCHHHHHHHHhCCCceEEeecCCC
Q 023541          143 LNGPALLVDVPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLS  222 (281)
Q Consensus       143 ~~g~avvlDv~~~~~It~edle~~~i~~g~d~VL~rTG~~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~~V~~VGiD~~S  222 (281)
                      |+|||||||++   .||++     +|++| |+|||||||++++  .+++|. ++||+ +|+|+||++ ++|++||+|++|
T Consensus        64 ~~g~~vviD~~---~It~~-----~i~~g-d~vlirTg~~~~~--~~~~~~-~~pgl-~eaa~~L~~-~~v~~vG~D~~s  129 (186)
T 2b0a_A           64 IKGKGYCISLD---DFPGN-----KLPAC-DILLIYTGFSKYW--GRDEYF-EKIPE-IPFLDDIIK-SNIKCVGIDACT  129 (186)
T ss_dssp             EEEEEEEEETT---TCSSC-----CCCSC-SEEEEECSGGGGT--TSGGGG-GCCCC-CTTHHHHHH-SCCCEEEESSSC
T ss_pred             EEeEEEEEEEe---ccCHH-----HCCCC-cEEEEECCchhhc--CCchhh-cCCCH-HHHHHHHHH-CCCCEEEEcCCC
Confidence            99999999994   57766     47777 8999999998763  235666 89999 999999999 499999999999


Q ss_pred             cCCCCCCcHhHHhhhhCCCeeEEEccc--CCCCCCCcEEEEEeccccCCCCccceeeEEEC
Q 023541          223 AAAHDDLLPSHYEFLEGREVILVEGLK--LDGVPAGLYNIHCLHLRLLGAEGSPIRCILIK  281 (281)
Q Consensus       223 vd~~~~~~p~H~~lL~~~gI~iiE~Ln--Ld~L~~~~~~~~a~PLki~Ga~GsPvR~vAi~  281 (281)
                      +|.    +|+|+.||+ +|++++|||+  |++|++++|+++|+||||+|++|||||+||+.
T Consensus       130 ~d~----~p~H~~ll~-~gi~iiE~l~~nL~~l~~~~f~l~~~Plki~g~~gsP~R~vAi~  185 (186)
T 2b0a_A          130 IGG----FEEHKRLLS-NNILIIENLNENLKNLVGKSFYFLGLPLKIFDIDASPIRCIAIL  185 (186)
T ss_dssp             SSS----HHHHHHHHH-TTCEEEECBCGGGGGGBTCEEEEEEEECSCCSCSEEEEEEEEEE
T ss_pred             CCC----cHHHHHHHH-CCcEEEEehhhhHhhCCCCcEEEEEECcccCCCcccCeEEEEEc
Confidence            997    999999997 8999999995  99999999999999999999999999999983


No 3  
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=55.78  E-value=21  Score=27.77  Aligned_cols=56  Identities=7%  Similarity=0.190  Sum_probs=39.8

Q ss_pred             cCCCccCCHHHHhcCCCCCCCeEEEEEeccCcccccccccccCCCcccCHHHHHHHHhCCCceEEeecCC
Q 023541          152 VPRDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYL  221 (281)
Q Consensus       152 v~~~~~It~edle~~~i~~g~d~VL~rTG~~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~~V~~VGiD~~  221 (281)
                      +++-..|+.++++.. +.++.|+|+|=||-..+            +-++++..++|.++ ||.+--.|+.
T Consensus        43 ~~~~~~l~~~~l~~l-l~~~~evliiGtG~~~~------------~~~~~~~~~~l~~~-gI~ve~m~T~   98 (122)
T 2ab1_A           43 TEHSPGVQPADVKEV-VEKGVQTLVIGRGMSEA------------LKVPSSTVEYLKKH-GIDVRVLQTE   98 (122)
T ss_dssp             CCSSSCCCHHHHHHH-HTTCCSEEEEEECSSCC------------SCCCHHHHHHHHHT-TCEEEEECHH
T ss_pred             cCChhHCCHHHHHHH-hhCCCCEEEECCCCCCc------------cCCCHHHHHHHHHc-CCEEEEeCHH
Confidence            444567999999876 22345899999996432            23679999999995 8776666553


No 4  
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=46.21  E-value=27  Score=27.75  Aligned_cols=59  Identities=12%  Similarity=0.018  Sum_probs=41.0

Q ss_pred             EEcCCCccCCHHHHhcC-CCCCCCeEEEEEeccCcccccccccccCCCcccCHHHHHHHHhCCCceEEeecCCC
Q 023541          150 VDVPRDKNITAEVMESL-NIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLS  222 (281)
Q Consensus       150 lDv~~~~~It~edle~~-~i~~g~d~VL~rTG~~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~~V~~VGiD~~S  222 (281)
                      .++.+...|+.++++.. ...+..|+|+|=||-..+             -++++..++|.++ ||.+--.||.+
T Consensus        45 W~~~~~~~l~~e~l~~l~~~~p~pevliiGTG~~~~-------------~l~p~l~~~l~~~-GI~vE~M~T~a  104 (135)
T 2fvt_A           45 WDVTKPEQIDRYSLQRVFDNANAIDTLIVGTGADVW-------------IAPRQLREALRGV-NVVLDTMQTGP  104 (135)
T ss_dssp             ESCCSTTCCCTTTTHHHHHTTTSCSEEEEECTTSCC-------------CCCHHHHHHHHTT-TCEEEEECHHH
T ss_pred             cCCCCcccCCHHHHHHHHhcCCCCCEEEEcCCCCCC-------------cCCHHHHHHHHHc-CCEEEEeCHHH
Confidence            34555678888888765 222234899999996432             1678999999985 88777666644


No 5  
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=32.62  E-value=36  Score=26.59  Aligned_cols=57  Identities=11%  Similarity=-0.030  Sum_probs=40.1

Q ss_pred             EcCCCccCCHHHHhcC-CCCCCCeEEEEEeccCcccccccccccCCCcccCHHHHHHHHhCCCceEEeecCCC
Q 023541          151 DVPRDKNITAEVMESL-NIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLS  222 (281)
Q Consensus       151 Dv~~~~~It~edle~~-~i~~g~d~VL~rTG~~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~~V~~VGiD~~S  222 (281)
                      ++.. ..|+.++++.. ...+..|+|+|=||-..+             -++++..++|.++ ||.+--.||.+
T Consensus        48 ~~~~-~~l~~~~l~~l~~~~p~pevliiGtG~~~~-------------~l~p~~~~~l~~~-GI~vE~m~T~a  105 (128)
T 2fi9_A           48 DMTG-PVPTQEDISRVLEESDQIEVLLIGTGVELL-------------RLPEELRVLLWEK-RISSDTMSTGA  105 (128)
T ss_dssp             CCSS-SSCCTGGGHHHHHTGGGCSEEEEECTTSCC-------------CCCHHHHHHHHHT-TCEEEEECHHH
T ss_pred             CCCc-CCCCHHHHHHHHhcCCCCCEEEECCCCCCC-------------CCCHHHHHHHHHc-CCEEEEeCHHH
Confidence            4555 78899998765 222224899999996421             2678999999995 88777666643


No 6  
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=29.06  E-value=84  Score=25.42  Aligned_cols=57  Identities=16%  Similarity=0.198  Sum_probs=38.4

Q ss_pred             cCCCccCCHHHHhcC-CCCC----------------------CCeEEEEEeccCcccccccccccCCCcccCHHHHHHHH
Q 023541          152 VPRDKNITAEVMESL-NIPR----------------------GVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLV  208 (281)
Q Consensus       152 v~~~~~It~edle~~-~i~~----------------------g~d~VL~rTG~~~~~~~~~~~y~~~~Pgls~eaA~~L~  208 (281)
                      +.....|+.++++.+ ...+                      +.|+|+|=||-..+             -++++..++|.
T Consensus        46 ~~~~~~i~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~~~p~~~pEvliiGTG~~~~-------------~l~p~~~~~L~  112 (150)
T 3cpk_A           46 VQRPADITASLLQQAAGLAEVVRDPLAFLDEPEAGAGARPANAPEVLLVGTGRRQH-------------LLGPEQVRPLL  112 (150)
T ss_dssp             CSSGGGCCHHHHHHHHTCC-----------------------CCSEEEEECTTSCC-------------CCCHHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHhcccccccchhhccccccccccccCCCCCEEEEcCCCCCC-------------CCCHHHHHHHH
Confidence            334567888888754 2211                      35899999996432             36789999999


Q ss_pred             hCCCceEEeecCCC
Q 023541          209 QNTDIKLVGIDYLS  222 (281)
Q Consensus       209 e~~~V~~VGiD~~S  222 (281)
                      ++ ||.+--.||.+
T Consensus       113 ~~-GIgvE~M~T~a  125 (150)
T 3cpk_A          113 AM-GVGVEAMDTQA  125 (150)
T ss_dssp             TT-TCEEEEECHHH
T ss_pred             Hc-CCEEEEeCHHH
Confidence            85 88766666543


No 7  
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=25.20  E-value=25  Score=27.75  Aligned_cols=54  Identities=9%  Similarity=-0.015  Sum_probs=37.2

Q ss_pred             CCccCCHHHHhcCCCCCCCeEEEEEeccCcccccccccccCCCcccCHHHHHHHHhCCCceEEeecCCC
Q 023541          154 RDKNITAEVMESLNIPRGVRRVIFRTLNTDRKLMFKREFDSSYVGFMKDGARWLVQNTDIKLVGIDYLS  222 (281)
Q Consensus       154 ~~~~It~edle~~~i~~g~d~VL~rTG~~~~~~~~~~~y~~~~Pgls~eaA~~L~e~~~V~~VGiD~~S  222 (281)
                      ....|+.++++.....+ .|+|+|=||-..+             -++++..++|.++ ||.+--.||.+
T Consensus        48 ~~~~l~~e~l~~ll~~~-pevliiGTG~~~~-------------~l~p~~~~~l~~~-GI~vE~m~T~a  101 (132)
T 2gm2_A           48 SLGQLQPAHMDAVLALN-PAVILLGTGERQQ-------------FPSTDVLAACLTR-GIGLEAMTNAA  101 (132)
T ss_dssp             SGGGCCTTTSHHHHHHC-CSEEEEECTTSCC-------------CCCHHHHHHHHHH-TCEEEEECHHH
T ss_pred             CcccCCHHHHHHHHhcC-CCEEEECCCCCCC-------------cCCHHHHHHHHHc-CCEEEEeCHHH
Confidence            34568888876542112 4899999996432             3678999999995 88777666643


No 8  
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=20.46  E-value=1.5e+02  Score=21.52  Aligned_cols=16  Identities=25%  Similarity=0.262  Sum_probs=12.5

Q ss_pred             CHHHHHHHHhCCCceEE
Q 023541          200 MKDGARWLVQNTDIKLV  216 (281)
Q Consensus       200 s~eaA~~L~e~~~V~~V  216 (281)
                      |..+|++|.+. |...+
T Consensus        69 S~~aa~~L~~~-G~~~~   84 (103)
T 3iwh_A           69 SAKVVEYLEAN-GIDAV   84 (103)
T ss_dssp             HHHHHHHHHTT-TCEEE
T ss_pred             HHHHHHHHHHc-CCCEE
Confidence            56789999985 77765


No 9  
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=19.64  E-value=1e+02  Score=28.08  Aligned_cols=51  Identities=14%  Similarity=0.133  Sum_probs=39.1

Q ss_pred             CCCcccCHHHHHHHHhCCCceEEeecCCCcCCCCC-CcHhHHhhhhCCCeeEEE
Q 023541          194 SSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDD-LLPSHYEFLEGREVILVE  246 (281)
Q Consensus       194 ~~~Pgls~eaA~~L~e~~~V~~VGiD~~Svd~~~~-~~p~H~~lL~~~gI~iiE  246 (281)
                      .-|||++.+..+.+.+. +++.|-+.+.+....+. ..+.=+.+.+ +||+++=
T Consensus       228 ~~~pG~~~~~l~~~~~~-g~~GiVle~~G~Gn~p~~~~~~l~~a~~-~Gi~VV~  279 (337)
T 4pga_A          228 YSYGNVTDTAYKALAQN-GAKALIHAGTGNGSVSSRVVPALQQLRK-NGTQIIR  279 (337)
T ss_dssp             ECCTTCCSHHHHHHHHT-TCSEEEEEEBTTTBCCTTTHHHHHHHHH-TTCEEEE
T ss_pred             EECCCCCHHHHHHHHhc-CCCEEEEEEeCCCCCCHHHHHHHHHHHH-CCCEEEE
Confidence            35899999999999994 99999998888776553 3455555555 6888775


No 10 
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=19.35  E-value=1.2e+02  Score=27.38  Aligned_cols=51  Identities=14%  Similarity=0.146  Sum_probs=37.9

Q ss_pred             CCCcccCHHHHHHHHhCCCceEEeecCCCcCCCCCCc-HhHHhhh-hCCCeeEEE
Q 023541          194 SSYVGFMKDGARWLVQNTDIKLVGIDYLSAAAHDDLL-PSHYEFL-EGREVILVE  246 (281)
Q Consensus       194 ~~~Pgls~eaA~~L~e~~~V~~VGiD~~Svd~~~~~~-p~H~~lL-~~~gI~iiE  246 (281)
                      ..|||++.+..+.+.+. +++.|-+.+.+....+..+ +.=+.+. + +||+++=
T Consensus       222 ~~~pG~~~~~l~~~~~~-g~~GiVle~~G~Gn~p~~~~~~l~~a~~~-~gi~VV~  274 (331)
T 1agx_A          222 YGSDNMMPDAYQAFAKA-GVKAIIHAGTGNGSMANYLVPEVRKLHDE-QGLQIVR  274 (331)
T ss_dssp             ECCSSCCTHHHHHHHTT-TCSEEEEEEBTTTBCCTTHHHHHHHHHHT-TCCEEEE
T ss_pred             EeCCCCCHHHHHHHHhC-CCCEEEEeeECCCCCCHHHHHHHHHHHHc-CCCEEEE
Confidence            35899999999999985 8999999888887665433 4344444 4 6888764


Done!