Query 023543
Match_columns 281
No_of_seqs 338 out of 2335
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 08:37:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023543.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023543hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bzb_A Uncharacterized protein 99.9 3.4E-22 1.2E-26 177.7 16.4 184 92-279 53-266 (281)
2 2nxc_A L11 mtase, ribosomal pr 99.8 7.6E-18 2.6E-22 147.5 15.3 186 38-257 55-242 (254)
3 3dmg_A Probable ribosomal RNA 99.7 4.8E-16 1.6E-20 143.8 19.8 184 66-278 184-373 (381)
4 3lpm_A Putative methyltransfer 99.7 5.2E-16 1.8E-20 135.8 16.5 179 75-278 17-219 (259)
5 1dus_A MJ0882; hypothetical pr 99.7 2.2E-14 7.6E-19 118.3 20.7 146 71-236 14-161 (194)
6 4dcm_A Ribosomal RNA large sub 99.6 9.5E-15 3.2E-19 134.9 18.7 176 71-277 184-367 (375)
7 3sm3_A SAM-dependent methyltra 99.6 2.3E-15 7.7E-20 128.4 12.3 110 121-233 29-142 (235)
8 3grz_A L11 mtase, ribosomal pr 99.6 5.1E-15 1.7E-19 124.5 13.8 176 55-257 5-183 (205)
9 3lcc_A Putative methyl chlorid 99.6 7.8E-15 2.7E-19 125.9 15.2 143 104-260 54-208 (235)
10 3mti_A RRNA methylase; SAM-dep 99.6 1.7E-14 5.7E-19 119.2 15.7 131 121-258 21-168 (185)
11 3e23_A Uncharacterized protein 99.6 7.5E-15 2.5E-19 123.9 13.8 144 121-279 42-202 (211)
12 3g5l_A Putative S-adenosylmeth 99.6 9.7E-15 3.3E-19 126.6 14.7 148 121-279 43-246 (253)
13 1xxl_A YCGJ protein; structura 99.6 1.3E-14 4.5E-19 125.1 15.4 120 100-235 7-127 (239)
14 3evz_A Methyltransferase; NYSG 99.6 1.8E-14 6.3E-19 123.1 16.0 144 121-278 54-220 (230)
15 3jwg_A HEN1, methyltransferase 99.6 9.5E-14 3.2E-18 117.7 20.2 170 100-277 11-209 (219)
16 3dh0_A SAM dependent methyltra 99.6 2.1E-14 7.3E-19 121.5 15.9 129 121-257 36-179 (219)
17 1nkv_A Hypothetical protein YJ 99.6 5.7E-15 1.9E-19 128.1 12.5 106 121-234 35-142 (256)
18 3g89_A Ribosomal RNA small sub 99.6 1E-14 3.4E-19 127.4 12.9 130 121-259 79-212 (249)
19 1pjz_A Thiopurine S-methyltran 99.6 1.2E-14 4E-19 122.8 12.7 167 103-277 8-202 (203)
20 3dlc_A Putative S-adenosyl-L-m 99.6 1.9E-14 6.4E-19 121.2 13.9 106 122-234 43-150 (219)
21 2ozv_A Hypothetical protein AT 99.6 1.3E-14 4.5E-19 127.2 13.3 162 101-278 23-212 (260)
22 3e05_A Precorrin-6Y C5,15-meth 99.6 1.8E-13 6.2E-18 114.9 19.8 120 121-253 39-162 (204)
23 3njr_A Precorrin-6Y methylase; 99.6 1.6E-13 5.3E-18 116.0 19.5 124 121-258 54-179 (204)
24 4hc4_A Protein arginine N-meth 99.6 5.2E-15 1.8E-19 136.3 11.0 103 119-229 80-186 (376)
25 1vl5_A Unknown conserved prote 99.6 4.1E-14 1.4E-18 123.2 16.2 106 121-234 36-142 (260)
26 3hem_A Cyclopropane-fatty-acyl 99.6 8.3E-14 2.8E-18 124.2 18.5 106 121-236 71-187 (302)
27 3p9n_A Possible methyltransfer 99.6 9.1E-15 3.1E-19 121.6 11.2 130 100-236 23-157 (189)
28 3vc1_A Geranyl diphosphate 2-C 99.6 3.8E-14 1.3E-18 127.1 15.9 107 121-235 116-224 (312)
29 3jwh_A HEN1; methyltransferase 99.6 1.5E-13 5.2E-18 116.4 18.7 142 121-265 28-198 (217)
30 1xdz_A Methyltransferase GIDB; 99.6 2E-14 6.7E-19 124.3 13.4 128 122-258 70-201 (240)
31 2o57_A Putative sarcosine dime 99.6 7.1E-14 2.4E-18 124.0 17.3 108 121-235 81-190 (297)
32 3cgg_A SAM-dependent methyltra 99.6 4.9E-14 1.7E-18 116.4 14.9 126 121-259 45-175 (195)
33 3f4k_A Putative methyltransfer 99.6 6.5E-14 2.2E-18 121.4 16.0 106 121-234 45-152 (257)
34 3kkz_A Uncharacterized protein 99.6 3.3E-14 1.1E-18 124.4 14.3 106 121-234 45-152 (267)
35 4gek_A TRNA (CMO5U34)-methyltr 99.6 1.5E-14 5.1E-19 127.1 11.8 107 121-236 69-182 (261)
36 1kpg_A CFA synthase;, cyclopro 99.6 1.9E-13 6.4E-18 120.7 18.8 121 102-236 48-172 (287)
37 3ujc_A Phosphoethanolamine N-m 99.6 3.5E-14 1.2E-18 123.3 13.8 122 100-235 37-162 (266)
38 1y8c_A S-adenosylmethionine-de 99.6 5.3E-14 1.8E-18 120.6 14.5 101 121-231 36-141 (246)
39 2yxd_A Probable cobalt-precorr 99.6 1.5E-13 5.2E-18 112.4 16.5 135 102-257 19-155 (183)
40 2xvm_A Tellurite resistance pr 99.6 3.7E-14 1.3E-18 117.9 12.9 104 121-233 31-137 (199)
41 4htf_A S-adenosylmethionine-de 99.6 2.5E-14 8.4E-19 126.4 12.2 108 121-234 67-175 (285)
42 3hnr_A Probable methyltransfer 99.5 1.2E-13 4.3E-18 116.9 15.7 101 121-234 44-147 (220)
43 3i9f_A Putative type 11 methyl 99.5 3.5E-14 1.2E-18 115.6 11.8 121 121-258 16-147 (170)
44 2gb4_A Thiopurine S-methyltran 99.5 2E-13 6.7E-18 119.4 16.8 168 104-278 54-252 (252)
45 3bus_A REBM, methyltransferase 99.5 1.1E-13 3.8E-18 121.1 15.0 124 100-234 43-168 (273)
46 2kw5_A SLR1183 protein; struct 99.5 4E-13 1.4E-17 112.3 17.8 127 122-259 30-171 (202)
47 1yzh_A TRNA (guanine-N(7)-)-me 99.5 4E-13 1.4E-17 113.8 17.6 129 122-258 41-181 (214)
48 2ex4_A Adrenal gland protein A 99.5 1.6E-13 5.5E-18 118.2 15.3 130 122-259 79-225 (241)
49 3h2b_A SAM-dependent methyltra 99.5 1E-13 3.4E-18 116.1 13.5 124 123-259 42-182 (203)
50 2p7i_A Hypothetical protein; p 99.5 4.3E-14 1.5E-18 121.3 11.2 102 121-235 41-144 (250)
51 2frn_A Hypothetical protein PH 99.5 4.7E-14 1.6E-18 124.9 11.5 125 121-257 124-255 (278)
52 3bkw_A MLL3908 protein, S-aden 99.5 9E-14 3.1E-18 119.3 12.9 101 121-232 42-144 (243)
53 3l8d_A Methyltransferase; stru 99.5 1.1E-13 3.7E-18 118.8 12.9 102 121-233 52-154 (242)
54 3hm2_A Precorrin-6Y C5,15-meth 99.5 4.9E-13 1.7E-17 109.2 15.9 123 121-258 24-152 (178)
55 3iv6_A Putative Zn-dependent a 99.5 1.5E-13 5.2E-18 120.7 13.3 103 121-235 44-151 (261)
56 3e8s_A Putative SAM dependent 99.5 9E-14 3.1E-18 117.6 11.6 129 121-261 51-211 (227)
57 2i62_A Nicotinamide N-methyltr 99.5 5.5E-14 1.9E-18 122.2 10.5 138 121-258 55-238 (265)
58 1ve3_A Hypothetical protein PH 99.5 1.9E-13 6.4E-18 116.1 13.5 104 122-234 38-144 (227)
59 1jsx_A Glucose-inhibited divis 99.5 1.1E-13 3.7E-18 116.2 11.8 119 122-257 65-186 (207)
60 3ofk_A Nodulation protein S; N 99.5 5.6E-14 1.9E-18 118.8 10.0 119 100-233 33-155 (216)
61 3dtn_A Putative methyltransfer 99.5 3.2E-13 1.1E-17 115.5 13.9 104 121-235 43-151 (234)
62 2a14_A Indolethylamine N-methy 99.5 3.5E-14 1.2E-18 124.5 8.0 139 120-258 53-237 (263)
63 3m70_A Tellurite resistance pr 99.5 1.4E-13 4.9E-18 121.5 11.9 103 121-233 119-224 (286)
64 4fsd_A Arsenic methyltransfera 99.5 2E-13 6.9E-18 126.1 13.2 116 120-235 81-206 (383)
65 2fk8_A Methoxy mycolic acid sy 99.5 5.2E-13 1.8E-17 119.8 15.4 106 121-236 89-198 (318)
66 3mgg_A Methyltransferase; NYSG 99.5 2.2E-13 7.4E-18 119.5 12.3 119 103-233 22-143 (276)
67 1l3i_A Precorrin-6Y methyltran 99.5 3.8E-13 1.3E-17 110.7 12.9 136 104-256 19-157 (192)
68 4hg2_A Methyltransferase type 99.5 9.3E-14 3.2E-18 121.8 9.7 109 105-234 28-137 (257)
69 2pjd_A Ribosomal RNA small sub 99.5 3.5E-13 1.2E-17 122.7 13.8 164 79-278 166-337 (343)
70 2ift_A Putative methylase HI07 99.5 5.4E-14 1.9E-18 118.5 7.8 111 121-236 52-167 (201)
71 3eey_A Putative rRNA methylase 99.5 2.3E-13 7.8E-18 113.5 11.4 132 121-258 21-172 (197)
72 2fyt_A Protein arginine N-meth 99.5 5E-13 1.7E-17 121.7 14.3 103 120-229 62-168 (340)
73 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.1E-12 3.6E-17 111.6 15.4 128 122-257 38-177 (213)
74 2yqz_A Hypothetical protein TT 99.5 2.9E-13 1E-17 117.4 12.1 106 121-235 38-144 (263)
75 3d2l_A SAM-dependent methyltra 99.5 9.9E-13 3.4E-17 112.7 15.2 100 121-231 32-136 (243)
76 3g2m_A PCZA361.24; SAM-depende 99.5 5.9E-13 2E-17 118.5 14.1 108 121-234 81-192 (299)
77 3thr_A Glycine N-methyltransfe 99.5 7.3E-14 2.5E-18 123.6 7.9 112 121-233 56-176 (293)
78 1xtp_A LMAJ004091AAA; SGPP, st 99.5 8.7E-13 3E-17 113.9 14.4 129 121-259 92-238 (254)
79 2fhp_A Methylase, putative; al 99.5 5.1E-14 1.8E-18 116.0 6.2 127 101-235 26-157 (187)
80 3q7e_A Protein arginine N-meth 99.5 2.7E-13 9.4E-18 123.8 11.6 104 120-230 64-171 (349)
81 2fpo_A Methylase YHHF; structu 99.5 1.1E-13 3.8E-18 116.6 8.2 107 121-235 53-163 (202)
82 3kr9_A SAM-dependent methyltra 99.5 5.1E-13 1.8E-17 114.7 12.4 124 121-256 14-140 (225)
83 3ou2_A SAM-dependent methyltra 99.5 4.1E-13 1.4E-17 113.1 11.7 101 121-234 45-148 (218)
84 3pfg_A N-methyltransferase; N, 99.5 5.1E-13 1.7E-17 116.4 12.6 97 121-231 49-150 (263)
85 4dzr_A Protein-(glutamine-N5) 99.5 3.7E-14 1.2E-18 119.1 5.0 142 102-256 13-189 (215)
86 2p8j_A S-adenosylmethionine-de 99.5 2.9E-13 1E-17 113.5 10.5 105 121-234 22-130 (209)
87 2g72_A Phenylethanolamine N-me 99.5 3.8E-13 1.3E-17 119.1 11.5 140 121-260 70-257 (289)
88 2b3t_A Protein methyltransfera 99.5 5.2E-13 1.8E-17 117.7 12.4 137 101-253 93-257 (276)
89 2igt_A SAM dependent methyltra 99.4 2.5E-12 8.6E-17 116.7 17.0 130 122-254 153-299 (332)
90 3lec_A NADB-rossmann superfami 99.4 8.5E-13 2.9E-17 113.6 13.1 124 121-256 20-146 (230)
91 3q87_B N6 adenine specific DNA 99.4 1.9E-12 6.4E-17 106.1 14.5 146 100-277 7-163 (170)
92 3g5t_A Trans-aconitate 3-methy 99.4 5.3E-13 1.8E-17 118.8 11.9 103 121-231 35-148 (299)
93 3fzg_A 16S rRNA methylase; met 99.4 7.3E-14 2.5E-18 116.4 5.6 102 121-233 48-152 (200)
94 4df3_A Fibrillarin-like rRNA/T 99.4 2.3E-12 7.9E-17 111.1 15.3 153 95-257 50-215 (233)
95 3r0q_C Probable protein argini 99.4 5.5E-13 1.9E-17 123.0 12.1 105 120-232 61-169 (376)
96 3gnl_A Uncharacterized protein 99.4 2.3E-12 7.7E-17 111.8 15.0 122 121-254 20-144 (244)
97 2esr_A Methyltransferase; stru 99.4 7.2E-14 2.5E-18 114.6 4.9 127 100-236 12-142 (177)
98 3dxy_A TRNA (guanine-N(7)-)-me 99.4 4.4E-13 1.5E-17 114.6 9.9 121 122-249 34-165 (218)
99 3g07_A 7SK snRNA methylphospha 99.4 1.5E-13 5E-18 122.4 7.0 114 120-233 44-221 (292)
100 1g6q_1 HnRNP arginine N-methyl 99.4 1E-12 3.4E-17 119.0 12.6 103 120-229 36-142 (328)
101 3tfw_A Putative O-methyltransf 99.4 1.6E-12 5.4E-17 113.0 13.0 129 121-256 62-208 (248)
102 1uwv_A 23S rRNA (uracil-5-)-me 99.4 2.4E-11 8.4E-16 114.0 22.0 162 80-263 254-418 (433)
103 3dli_A Methyltransferase; PSI- 99.4 9.9E-13 3.4E-17 113.2 11.5 100 121-234 40-142 (240)
104 3a27_A TYW2, uncharacterized p 99.4 9.7E-13 3.3E-17 116.1 11.6 115 121-248 118-238 (272)
105 3u81_A Catechol O-methyltransf 99.4 6.8E-13 2.3E-17 113.0 10.2 130 121-257 57-195 (221)
106 3duw_A OMT, O-methyltransferas 99.4 1.2E-12 4E-17 111.4 11.6 129 121-257 57-206 (223)
107 3lbf_A Protein-L-isoaspartate 99.4 1.1E-12 3.8E-17 110.4 11.2 100 121-234 76-176 (210)
108 3gu3_A Methyltransferase; alph 99.4 1E-12 3.4E-17 116.3 11.3 104 121-234 21-128 (284)
109 1ws6_A Methyltransferase; stru 99.4 1.2E-13 4.2E-18 111.9 4.9 107 122-236 41-151 (171)
110 2p35_A Trans-aconitate 2-methy 99.4 1E-12 3.4E-17 113.9 10.8 100 121-234 32-134 (259)
111 3ggd_A SAM-dependent methyltra 99.4 7.2E-13 2.5E-17 114.2 9.8 108 120-235 54-166 (245)
112 1nv8_A HEMK protein; class I a 99.4 2.6E-12 8.9E-17 114.1 13.6 122 101-235 106-252 (284)
113 2pxx_A Uncharacterized protein 99.4 1.3E-12 4.4E-17 109.6 11.0 115 105-235 31-162 (215)
114 1ri5_A MRNA capping enzyme; me 99.4 9.1E-13 3.1E-17 116.4 10.4 107 121-234 63-176 (298)
115 1yb2_A Hypothetical protein TA 99.4 3.1E-12 1E-16 112.8 13.7 121 121-257 109-235 (275)
116 3v97_A Ribosomal RNA large sub 99.4 1.4E-12 4.6E-17 129.4 12.4 149 121-276 538-701 (703)
117 3bkx_A SAM-dependent methyltra 99.4 2.3E-12 7.7E-17 112.8 12.4 109 121-234 42-161 (275)
118 3i53_A O-methyltransferase; CO 99.4 1.2E-11 4.2E-16 111.6 17.3 104 122-234 169-276 (332)
119 1zx0_A Guanidinoacetate N-meth 99.4 5.6E-13 1.9E-17 114.6 8.0 105 121-232 59-170 (236)
120 3ocj_A Putative exported prote 99.4 1.3E-12 4.4E-17 116.8 10.6 105 121-233 117-228 (305)
121 3ntv_A MW1564 protein; rossman 99.4 2.3E-12 8E-17 110.7 11.8 104 121-232 70-176 (232)
122 3gwz_A MMCR; methyltransferase 99.4 1.3E-11 4.5E-16 113.3 17.5 106 121-235 201-310 (369)
123 3ege_A Putative methyltransfer 99.4 1.2E-12 4.2E-17 114.3 10.1 110 105-233 21-131 (261)
124 1qzz_A RDMB, aclacinomycin-10- 99.4 7.1E-12 2.4E-16 114.8 15.4 104 121-233 181-288 (374)
125 3m33_A Uncharacterized protein 99.4 1.8E-12 6E-17 110.8 10.2 116 121-257 47-165 (226)
126 3fpf_A Mtnas, putative unchara 99.4 5.5E-12 1.9E-16 112.3 13.6 101 120-233 120-223 (298)
127 3ccf_A Cyclopropane-fatty-acyl 99.4 3E-12 1E-16 112.6 11.9 101 121-235 56-157 (279)
128 1vlm_A SAM-dependent methyltra 99.4 4.9E-12 1.7E-16 107.4 12.7 120 122-260 47-189 (219)
129 3dp7_A SAM-dependent methyltra 99.4 9.7E-12 3.3E-16 114.0 15.6 107 122-234 179-289 (363)
130 3opn_A Putative hemolysin; str 99.4 2.5E-12 8.5E-17 111.0 10.9 158 101-274 20-199 (232)
131 3bxo_A N,N-dimethyltransferase 99.4 4.5E-12 1.5E-16 108.3 12.4 97 121-231 39-140 (239)
132 2gs9_A Hypothetical protein TT 99.4 2.3E-12 7.9E-17 108.4 10.1 99 122-236 36-136 (211)
133 3tr6_A O-methyltransferase; ce 99.4 2.6E-12 8.8E-17 109.3 10.1 130 121-257 63-213 (225)
134 3orh_A Guanidinoacetate N-meth 99.4 3.6E-13 1.2E-17 116.3 4.7 105 121-232 59-170 (236)
135 1wzn_A SAM-dependent methyltra 99.4 2.5E-12 8.7E-17 111.1 10.1 102 121-232 40-145 (252)
136 3gdh_A Trimethylguanosine synt 99.4 3.1E-13 1.1E-17 116.3 4.1 103 121-231 77-180 (241)
137 3mb5_A SAM-dependent methyltra 99.4 6.3E-12 2.2E-16 109.0 12.5 118 121-253 92-216 (255)
138 3k6r_A Putative transferase PH 99.3 2.7E-12 9.2E-17 113.6 10.1 125 121-257 124-255 (278)
139 1x19_A CRTF-related protein; m 99.3 2.2E-11 7.5E-16 111.2 16.4 103 121-232 189-295 (359)
140 4dmg_A Putative uncharacterize 99.3 1.4E-11 4.8E-16 114.2 15.3 106 122-235 214-329 (393)
141 3r3h_A O-methyltransferase, SA 99.3 8.8E-13 3E-17 114.4 6.7 130 121-257 59-209 (242)
142 2b78_A Hypothetical protein SM 99.3 1.3E-12 4.3E-17 121.0 8.0 112 121-236 211-335 (385)
143 2y1w_A Histone-arginine methyl 99.3 4.5E-12 1.5E-16 115.7 11.6 104 120-231 48-154 (348)
144 1wy7_A Hypothetical protein PH 99.3 9E-11 3.1E-15 98.3 18.3 122 121-258 48-174 (207)
145 2vdw_A Vaccinia virus capping 99.3 4.9E-12 1.7E-16 113.3 11.1 114 122-235 48-172 (302)
146 2r3s_A Uncharacterized protein 99.3 1.2E-11 4.1E-16 111.4 13.7 107 121-235 164-274 (335)
147 2pwy_A TRNA (adenine-N(1)-)-me 99.3 1.2E-11 4.1E-16 107.1 13.2 120 121-255 95-220 (258)
148 2avn_A Ubiquinone/menaquinone 99.3 2.4E-12 8.1E-17 112.2 8.6 101 122-236 54-156 (260)
149 2ipx_A RRNA 2'-O-methyltransfe 99.3 1.4E-11 4.9E-16 105.5 13.4 128 121-257 76-215 (233)
150 1fbn_A MJ fibrillarin homologu 99.3 1.7E-11 5.8E-16 105.0 13.7 102 121-232 73-178 (230)
151 1o54_A SAM-dependent O-methylt 99.3 1.4E-11 5E-16 108.4 13.4 122 121-257 111-237 (277)
152 1nt2_A Fibrillarin-like PRE-rR 99.3 6.7E-12 2.3E-16 106.5 10.7 104 121-233 56-162 (210)
153 3cc8_A Putative methyltransfer 99.3 5.1E-12 1.7E-16 107.0 9.9 101 121-234 31-132 (230)
154 3c0k_A UPF0064 protein YCCW; P 99.3 1.2E-11 4.2E-16 114.6 13.4 134 121-258 219-369 (396)
155 2ip2_A Probable phenazine-spec 99.3 3.2E-11 1.1E-15 108.8 15.6 103 123-234 168-274 (334)
156 2jjq_A Uncharacterized RNA met 99.3 2.1E-10 7.3E-15 107.4 21.1 134 102-261 277-411 (425)
157 3tma_A Methyltransferase; thum 99.3 9.3E-11 3.2E-15 107.0 18.2 117 104-233 189-318 (354)
158 2yx1_A Hypothetical protein MJ 99.3 6.8E-12 2.3E-16 114.0 10.5 101 121-236 194-295 (336)
159 3bt7_A TRNA (uracil-5-)-methyl 99.3 2.2E-11 7.4E-16 112.0 13.8 164 76-264 178-356 (369)
160 1tw3_A COMT, carminomycin 4-O- 99.3 3.4E-11 1.2E-15 109.8 15.0 105 121-234 182-290 (360)
161 2yvl_A TRMI protein, hypotheti 99.3 4.7E-11 1.6E-15 102.7 15.0 118 121-252 90-208 (248)
162 1vbf_A 231AA long hypothetical 99.3 3E-12 1E-16 109.3 7.0 130 121-267 69-199 (231)
163 2hnk_A SAM-dependent O-methylt 99.3 6.2E-12 2.1E-16 108.3 8.9 130 121-257 59-220 (239)
164 1o9g_A RRNA methyltransferase; 99.3 4.8E-12 1.7E-16 109.7 8.3 113 122-234 51-216 (250)
165 2yxe_A Protein-L-isoaspartate 99.3 1.9E-11 6.4E-16 103.1 11.7 101 121-235 76-180 (215)
166 1ixk_A Methyltransferase; open 99.3 4.1E-11 1.4E-15 107.9 14.0 138 101-256 105-272 (315)
167 2gpy_A O-methyltransferase; st 99.3 7.5E-12 2.6E-16 107.2 8.6 105 121-232 53-160 (233)
168 3c3p_A Methyltransferase; NP_9 99.3 7.1E-12 2.4E-16 105.7 8.2 102 121-232 55-160 (210)
169 3bgv_A MRNA CAP guanine-N7 met 99.3 2.3E-11 7.9E-16 108.9 11.9 114 122-235 34-158 (313)
170 3hp7_A Hemolysin, putative; st 99.3 3.3E-11 1.1E-15 107.2 12.6 157 101-274 68-247 (291)
171 2aot_A HMT, histamine N-methyl 99.3 8.6E-12 3E-16 110.7 8.9 105 122-234 52-174 (292)
172 2avd_A Catechol-O-methyltransf 99.3 1.3E-11 4.3E-16 105.2 9.6 129 121-257 68-218 (229)
173 2zfu_A Nucleomethylin, cerebra 99.3 4.6E-11 1.6E-15 100.7 12.6 124 121-278 66-191 (215)
174 1dl5_A Protein-L-isoaspartate 99.3 1.6E-11 5.5E-16 110.4 10.3 99 121-233 74-176 (317)
175 1sui_A Caffeoyl-COA O-methyltr 99.3 1.3E-11 4.5E-16 107.3 9.1 104 121-232 78-190 (247)
176 1ej0_A FTSJ; methyltransferase 99.3 9.7E-11 3.3E-15 94.5 13.7 133 103-256 7-158 (180)
177 3dr5_A Putative O-methyltransf 99.3 1.1E-11 3.8E-16 106.1 8.4 128 123-257 57-202 (221)
178 3mcz_A O-methyltransferase; ad 99.3 2.3E-11 8E-16 110.5 11.0 106 123-234 180-289 (352)
179 3adn_A Spermidine synthase; am 99.3 3.1E-11 1.1E-15 107.7 11.4 133 122-256 83-224 (294)
180 3b3j_A Histone-arginine methyl 99.2 1.6E-11 5.6E-16 116.6 10.0 103 121-231 157-262 (480)
181 3htx_A HEN1; HEN1, small RNA m 99.2 1E-10 3.5E-15 115.9 15.8 124 103-234 706-836 (950)
182 3lst_A CALO1 methyltransferase 99.2 4.1E-11 1.4E-15 109.1 12.1 101 122-234 184-288 (348)
183 1jg1_A PIMT;, protein-L-isoasp 99.2 2.2E-11 7.7E-16 104.5 9.7 101 121-235 90-192 (235)
184 1g8a_A Fibrillarin-like PRE-rR 99.2 2.4E-11 8.3E-16 103.5 9.6 104 121-233 72-179 (227)
185 2vdv_E TRNA (guanine-N(7)-)-me 99.2 4.3E-11 1.5E-15 103.6 11.3 113 121-233 48-174 (246)
186 2h00_A Methyltransferase 10 do 99.2 1.2E-11 4E-16 107.4 7.7 82 122-207 65-152 (254)
187 2plw_A Ribosomal RNA methyltra 99.2 2.4E-10 8.3E-15 95.1 15.5 133 103-256 7-176 (201)
188 3ckk_A TRNA (guanine-N(7)-)-me 99.2 6.8E-11 2.3E-15 102.1 12.3 126 122-249 46-183 (235)
189 2pbf_A Protein-L-isoaspartate 99.2 2E-11 6.8E-16 103.9 8.8 108 121-234 79-195 (227)
190 2qm3_A Predicted methyltransfe 99.2 1.6E-10 5.6E-15 106.3 15.4 106 121-234 171-280 (373)
191 2as0_A Hypothetical protein PH 99.2 1.9E-11 6.4E-16 113.4 8.8 132 122-257 217-364 (396)
192 1wxx_A TT1595, hypothetical pr 99.2 3E-11 1E-15 111.5 10.1 110 122-236 209-329 (382)
193 3uwp_A Histone-lysine N-methyl 99.2 2.9E-11 1E-15 111.8 9.9 110 120-236 171-292 (438)
194 1i9g_A Hypothetical protein RV 99.2 8.8E-11 3E-15 103.1 12.5 118 121-252 98-223 (280)
195 3cbg_A O-methyltransferase; cy 99.2 3.7E-11 1.3E-15 103.3 9.5 130 121-257 71-221 (232)
196 3tm4_A TRNA (guanine N2-)-meth 99.2 1.5E-10 5.1E-15 106.6 13.9 121 121-256 216-349 (373)
197 3mq2_A 16S rRNA methyltransfer 99.2 3.3E-11 1.1E-15 101.9 8.5 108 121-233 26-141 (218)
198 2bm8_A Cephalosporin hydroxyla 99.2 3.5E-11 1.2E-15 103.9 8.7 123 121-256 80-216 (236)
199 3id6_C Fibrillarin-like rRNA/T 99.2 2.9E-10 9.9E-15 98.0 14.4 105 120-233 74-182 (232)
200 1u2z_A Histone-lysine N-methyl 99.2 5.4E-11 1.8E-15 111.4 10.3 109 121-236 241-363 (433)
201 3c3y_A Pfomt, O-methyltransfer 99.2 3E-11 1E-15 104.2 8.0 104 121-232 69-181 (237)
202 3ajd_A Putative methyltransfer 99.2 1.9E-10 6.3E-15 101.4 12.6 141 101-256 70-238 (274)
203 3p2e_A 16S rRNA methylase; met 99.2 2.4E-11 8.1E-16 104.2 6.5 100 121-230 23-137 (225)
204 1ne2_A Hypothetical protein TA 99.2 4.7E-10 1.6E-14 93.6 14.2 95 121-234 50-148 (200)
205 1i1n_A Protein-L-isoaspartate 99.2 3.7E-11 1.3E-15 102.2 7.5 105 121-234 76-184 (226)
206 2yxl_A PH0851 protein, 450AA l 99.2 1.6E-10 5.4E-15 109.0 12.4 141 101-256 246-416 (450)
207 4a6d_A Hydroxyindole O-methylt 99.2 7.7E-10 2.6E-14 101.0 16.3 103 122-234 179-285 (353)
208 2qe6_A Uncharacterized protein 99.2 1.1E-10 3.9E-15 102.9 10.4 106 123-235 78-199 (274)
209 3bwc_A Spermidine synthase; SA 99.2 1E-10 3.5E-15 104.7 10.0 133 121-257 94-238 (304)
210 1r18_A Protein-L-isoaspartate( 99.2 9.9E-11 3.4E-15 99.8 9.4 99 121-233 83-195 (227)
211 4e2x_A TCAB9; kijanose, tetron 99.2 1.1E-11 3.6E-16 115.4 3.5 101 121-233 106-209 (416)
212 4azs_A Methyltransferase WBDD; 99.2 1.4E-11 4.7E-16 119.6 4.2 105 121-231 65-172 (569)
213 2b25_A Hypothetical protein; s 99.1 9.2E-10 3.1E-14 99.5 15.4 120 120-248 103-233 (336)
214 3m4x_A NOL1/NOP2/SUN family pr 99.1 1.8E-10 6.3E-15 108.5 10.6 141 99-256 90-260 (456)
215 2pt6_A Spermidine synthase; tr 99.1 1E-10 3.6E-15 105.5 8.6 130 122-256 116-256 (321)
216 1inl_A Spermidine synthase; be 99.1 2.7E-10 9.3E-15 101.6 11.1 128 122-255 90-230 (296)
217 1iy9_A Spermidine synthase; ro 99.1 1.5E-10 5.1E-15 102.3 9.3 129 122-256 75-215 (275)
218 3dou_A Ribosomal RNA large sub 99.1 2.4E-10 8.3E-15 95.5 9.4 134 102-256 9-161 (191)
219 1xj5_A Spermidine synthase 1; 99.1 9.5E-11 3.2E-15 106.4 6.8 127 122-252 120-257 (334)
220 1af7_A Chemotaxis receptor met 99.1 1.5E-10 5.1E-15 102.3 7.7 108 122-232 105-252 (274)
221 1mjf_A Spermidine synthase; sp 99.1 4.8E-10 1.6E-14 99.3 10.5 131 121-256 74-219 (281)
222 2dul_A N(2),N(2)-dimethylguano 99.1 1.4E-10 4.8E-15 107.0 7.3 101 122-233 47-165 (378)
223 1sqg_A SUN protein, FMU protei 99.1 1.4E-09 4.7E-14 101.9 14.1 162 100-277 232-428 (429)
224 3lcv_B Sisomicin-gentamicin re 99.1 9E-10 3.1E-14 95.9 11.5 124 122-257 132-270 (281)
225 2frx_A Hypothetical protein YE 99.1 2.5E-09 8.5E-14 101.5 15.7 133 101-246 102-264 (479)
226 2i7c_A Spermidine synthase; tr 99.1 1.9E-10 6.5E-15 102.0 7.5 132 122-256 78-218 (283)
227 2o07_A Spermidine synthase; st 99.1 2.5E-10 8.4E-15 102.3 8.2 129 121-255 94-234 (304)
228 3gjy_A Spermidine synthase; AP 99.1 3.1E-10 1E-14 102.1 8.1 125 124-254 91-223 (317)
229 1p91_A Ribosomal RNA large sub 99.0 3.7E-10 1.3E-14 98.5 8.3 96 121-236 84-182 (269)
230 2nyu_A Putative ribosomal RNA 99.0 1.1E-09 3.7E-14 90.7 10.7 115 121-252 21-163 (196)
231 3m6w_A RRNA methylase; rRNA me 99.0 7.8E-10 2.7E-14 104.4 10.8 140 100-256 87-256 (464)
232 1uir_A Polyamine aminopropyltr 99.0 8.3E-10 2.8E-14 99.3 10.5 129 122-255 77-221 (314)
233 3reo_A (ISO)eugenol O-methyltr 99.0 1.5E-09 5.1E-14 99.6 12.3 96 122-234 203-302 (368)
234 2wa2_A Non-structural protein 99.0 2.4E-10 8.3E-15 101.0 6.1 140 101-256 66-217 (276)
235 2b2c_A Spermidine synthase; be 99.0 2.6E-10 8.9E-15 102.6 6.0 127 122-254 108-246 (314)
236 3frh_A 16S rRNA methylase; met 99.0 7.8E-10 2.7E-14 95.3 8.6 101 121-234 104-207 (253)
237 3axs_A Probable N(2),N(2)-dime 99.0 2.5E-10 8.7E-15 105.6 5.5 103 122-233 52-159 (392)
238 2f8l_A Hypothetical protein LM 99.0 3.3E-09 1.1E-13 96.3 12.9 102 122-233 130-257 (344)
239 2oxt_A Nucleoside-2'-O-methylt 99.0 4.5E-10 1.5E-14 98.7 6.0 136 101-252 58-205 (265)
240 1fp2_A Isoflavone O-methyltran 99.0 1.8E-09 6.1E-14 98.3 10.2 97 122-235 188-291 (352)
241 2cmg_A Spermidine synthase; tr 99.0 1.6E-09 5.5E-14 95.0 9.5 123 122-258 72-199 (262)
242 1zq9_A Probable dimethyladenos 99.0 8.5E-10 2.9E-14 97.9 7.6 76 121-205 27-103 (285)
243 2h1r_A Dimethyladenosine trans 99.0 3.7E-09 1.3E-13 94.4 11.0 76 121-207 41-117 (299)
244 1zg3_A Isoflavanone 4'-O-methy 98.9 4.6E-09 1.6E-13 95.8 11.0 96 122-234 193-295 (358)
245 3ldu_A Putative methylase; str 98.9 6.8E-09 2.3E-13 95.9 11.0 104 121-233 194-345 (385)
246 3k0b_A Predicted N6-adenine-sp 98.9 7.7E-09 2.6E-13 95.8 10.9 104 121-233 200-351 (393)
247 1fp1_D Isoliquiritigenin 2'-O- 98.9 3E-09 1E-13 97.5 8.1 96 122-234 209-308 (372)
248 2ih2_A Modification methylase 98.9 3.1E-08 1E-12 91.8 14.4 110 103-234 24-166 (421)
249 2okc_A Type I restriction enzy 98.9 2.8E-08 9.4E-13 93.4 14.2 118 105-233 158-308 (445)
250 2p41_A Type II methyltransfera 98.9 3.7E-09 1.3E-13 94.7 7.8 133 102-252 67-211 (305)
251 3ldg_A Putative uncharacterize 98.9 1.6E-08 5.6E-13 93.3 12.0 105 121-233 193-344 (384)
252 2ld4_A Anamorsin; methyltransf 98.9 2.8E-09 9.5E-14 87.0 6.1 110 121-254 11-130 (176)
253 3p9c_A Caffeic acid O-methyltr 98.8 6.4E-09 2.2E-13 95.2 9.0 96 122-234 201-300 (364)
254 3ll7_A Putative methyltransfer 98.8 1.6E-09 5.5E-14 100.6 4.8 89 100-201 77-169 (410)
255 2r6z_A UPF0341 protein in RSP 98.8 3.6E-09 1.2E-13 92.5 5.4 81 121-207 82-172 (258)
256 3sso_A Methyltransferase; macr 98.8 6.5E-09 2.2E-13 95.9 7.0 96 121-234 215-326 (419)
257 2b9e_A NOL1/NOP2/SUN domain fa 98.8 6.5E-08 2.2E-12 86.7 13.4 89 100-201 88-180 (309)
258 3gru_A Dimethyladenosine trans 98.8 4.7E-08 1.6E-12 87.1 11.9 75 121-205 49-124 (295)
259 3giw_A Protein of unknown func 98.8 2.7E-08 9.1E-13 87.6 10.0 107 124-236 80-204 (277)
260 2qfm_A Spermine synthase; sper 98.7 2.2E-08 7.4E-13 91.3 7.8 154 122-279 188-361 (364)
261 4gqb_A Protein arginine N-meth 98.7 4.3E-08 1.5E-12 95.5 10.3 100 121-229 356-464 (637)
262 3tqs_A Ribosomal RNA small sub 98.6 5.8E-08 2E-12 84.7 8.0 78 121-207 28-107 (255)
263 2ar0_A M.ecoki, type I restric 98.6 2.6E-07 8.8E-12 89.0 13.1 155 121-279 168-363 (541)
264 1qam_A ERMC' methyltransferase 98.6 3.2E-07 1.1E-11 79.3 11.6 76 121-208 29-106 (244)
265 3v97_A Ribosomal RNA large sub 98.6 2.7E-07 9.1E-12 91.5 12.1 106 121-232 189-347 (703)
266 1yub_A Ermam, rRNA methyltrans 98.5 3.4E-09 1.2E-13 91.7 -2.6 77 121-209 28-106 (245)
267 3fut_A Dimethyladenosine trans 98.5 2.3E-07 8E-12 81.6 9.0 75 121-207 46-122 (271)
268 3s1s_A Restriction endonucleas 98.5 1.4E-06 4.7E-11 86.5 15.2 155 121-278 320-517 (878)
269 3lkd_A Type I restriction-modi 98.5 6.9E-06 2.3E-10 79.0 18.7 151 121-278 220-408 (542)
270 2oyr_A UPF0341 protein YHIQ; a 98.5 1.2E-07 4.1E-12 82.9 5.9 82 124-208 90-176 (258)
271 3cvo_A Methyltransferase-like 98.5 1.6E-06 5.5E-11 72.8 11.5 115 121-246 29-170 (202)
272 2k4m_A TR8_protein, UPF0146 pr 98.4 8.8E-07 3E-11 70.2 8.1 54 95-157 17-73 (153)
273 3ua3_A Protein arginine N-meth 98.4 4.7E-07 1.6E-11 88.5 7.2 99 123-229 410-531 (745)
274 1m6y_A S-adenosyl-methyltransf 98.3 3.5E-07 1.2E-11 81.7 5.3 74 121-201 25-104 (301)
275 2xyq_A Putative 2'-O-methyl tr 98.3 2.7E-06 9.3E-11 75.4 10.9 120 106-253 50-191 (290)
276 3ftd_A Dimethyladenosine trans 98.3 1.8E-06 6E-11 74.9 9.4 76 121-208 30-107 (249)
277 3uzu_A Ribosomal RNA small sub 98.3 1.4E-06 4.8E-11 76.9 7.9 55 121-184 41-100 (279)
278 3khk_A Type I restriction-modi 98.3 9.8E-06 3.3E-10 77.9 13.5 148 124-279 246-447 (544)
279 1qyr_A KSGA, high level kasuga 98.2 7.4E-07 2.5E-11 77.5 3.4 54 121-183 20-76 (252)
280 3evf_A RNA-directed RNA polyme 98.1 9.8E-06 3.3E-10 70.8 9.3 145 95-256 52-208 (277)
281 3o4f_A Spermidine synthase; am 98.0 0.00016 5.3E-09 64.1 14.5 135 121-257 82-225 (294)
282 2zig_A TTHA0409, putative modi 98.0 1.5E-05 5.3E-10 70.6 7.9 46 121-166 234-280 (297)
283 3b5i_A S-adenosyl-L-methionine 98.0 2.8E-05 9.4E-10 71.3 9.4 114 123-236 53-229 (374)
284 4fzv_A Putative methyltransfer 97.9 0.0001 3.4E-09 67.2 11.2 138 101-248 135-304 (359)
285 2efj_A 3,7-dimethylxanthine me 97.9 7.8E-05 2.7E-09 68.5 10.5 112 123-238 53-231 (384)
286 2oo3_A Protein involved in cat 97.8 7.5E-06 2.6E-10 71.9 3.1 128 121-256 90-223 (283)
287 2qy6_A UPF0209 protein YFCK; s 97.8 2.6E-05 9E-10 67.8 6.5 129 122-258 60-234 (257)
288 4auk_A Ribosomal RNA large sub 97.8 0.00032 1.1E-08 63.9 12.9 75 120-209 209-283 (375)
289 1g60_A Adenine-specific methyl 97.8 5.9E-05 2E-09 65.5 7.7 48 121-168 211-259 (260)
290 3gcz_A Polyprotein; flavivirus 97.7 3.7E-05 1.3E-09 67.3 6.1 144 96-256 69-225 (282)
291 3ufb_A Type I restriction-modi 97.7 0.0033 1.1E-07 60.1 19.1 159 106-278 205-413 (530)
292 3eld_A Methyltransferase; flav 97.7 0.0028 9.6E-08 55.8 16.9 145 95-256 59-215 (300)
293 2wk1_A NOVP; transferase, O-me 97.6 0.00012 4.2E-09 64.5 7.9 105 122-233 106-245 (282)
294 1m6e_X S-adenosyl-L-methionnin 97.5 7.4E-05 2.5E-09 68.1 4.4 111 123-237 52-214 (359)
295 2px2_A Genome polyprotein [con 97.3 0.00072 2.5E-08 58.4 8.6 139 95-256 51-207 (269)
296 1g55_A DNA cytosine methyltran 97.1 0.0014 4.8E-08 59.2 9.0 41 124-164 3-47 (343)
297 3r24_A NSP16, 2'-O-methyl tran 97.0 0.012 4.1E-07 51.8 13.3 127 105-257 95-239 (344)
298 3c6k_A Spermine synthase; sper 96.9 0.0024 8.3E-08 58.3 7.7 131 122-252 205-352 (381)
299 3lkz_A Non-structural protein 96.8 0.016 5.5E-07 50.9 12.4 143 95-256 72-228 (321)
300 1wg8_A Predicted S-adenosylmet 96.2 0.0078 2.7E-07 52.7 6.2 41 121-161 21-62 (285)
301 4h0n_A DNMT2; SAH binding, tra 96.0 0.051 1.7E-06 48.7 11.0 140 125-276 5-166 (333)
302 3g7u_A Cytosine-specific methy 95.9 0.013 4.4E-07 53.5 6.5 72 124-205 3-81 (376)
303 2vz8_A Fatty acid synthase; tr 95.9 0.0051 1.7E-07 68.8 4.4 100 123-232 1241-1348(2512)
304 3qv2_A 5-cytosine DNA methyltr 95.7 0.098 3.3E-06 46.7 11.4 143 123-276 10-177 (327)
305 4dcm_A Ribosomal RNA large sub 95.7 0.15 5E-06 46.4 12.7 120 96-236 18-140 (375)
306 2py6_A Methyltransferase FKBM; 95.6 0.028 9.5E-07 51.8 7.7 45 121-165 225-274 (409)
307 1boo_A Protein (N-4 cytosine-s 95.6 0.014 4.6E-07 52.2 5.3 47 121-167 251-298 (323)
308 2c7p_A Modification methylase 95.5 0.03 1E-06 50.1 7.1 44 121-164 9-54 (327)
309 3ubt_Y Modification methylase 95.4 0.49 1.7E-05 41.7 15.1 136 125-275 2-159 (331)
310 1eg2_A Modification methylase 95.4 0.028 9.7E-07 50.1 6.7 60 103-167 228-291 (319)
311 1rjd_A PPM1P, carboxy methyl t 95.2 0.12 4.3E-06 46.2 10.5 112 122-234 97-234 (334)
312 1f8f_A Benzyl alcohol dehydrog 95.0 0.067 2.3E-06 48.2 8.1 94 120-232 188-289 (371)
313 1e3j_A NADP(H)-dependent ketos 95.0 0.11 3.8E-06 46.4 9.4 94 120-232 166-271 (352)
314 1pl8_A Human sorbitol dehydrog 94.8 0.06 2E-06 48.3 7.3 94 120-232 169-273 (356)
315 3s2e_A Zinc-containing alcohol 94.7 0.053 1.8E-06 48.2 6.6 94 120-232 164-263 (340)
316 4ej6_A Putative zinc-binding d 94.7 0.093 3.2E-06 47.4 8.3 94 120-232 180-284 (370)
317 3m6i_A L-arabinitol 4-dehydrog 94.5 0.033 1.1E-06 50.1 4.8 98 120-233 177-284 (363)
318 1i4w_A Mitochondrial replicati 94.5 0.058 2E-06 48.8 6.3 42 122-163 58-102 (353)
319 1p0f_A NADP-dependent alcohol 94.4 0.25 8.6E-06 44.4 10.4 94 120-232 189-293 (373)
320 3p8z_A Mtase, non-structural p 94.4 0.072 2.5E-06 45.4 6.2 145 94-256 55-210 (267)
321 4dvj_A Putative zinc-dependent 94.2 0.087 3E-06 47.5 6.9 91 122-231 171-269 (363)
322 1uuf_A YAHK, zinc-type alcohol 94.2 0.036 1.2E-06 50.2 4.3 93 120-232 192-288 (369)
323 2fzw_A Alcohol dehydrogenase c 94.2 0.32 1.1E-05 43.6 10.5 94 120-232 188-292 (373)
324 1cdo_A Alcohol dehydrogenase; 94.1 0.27 9.3E-06 44.2 10.1 94 120-232 190-294 (374)
325 2jhf_A Alcohol dehydrogenase E 94.0 0.38 1.3E-05 43.2 10.7 94 120-232 189-293 (374)
326 3uko_A Alcohol dehydrogenase c 94.0 0.24 8.1E-06 44.7 9.3 94 120-232 191-295 (378)
327 1e3i_A Alcohol dehydrogenase, 93.9 0.32 1.1E-05 43.7 10.1 94 120-232 193-297 (376)
328 2h6e_A ADH-4, D-arabinose 1-de 93.8 0.05 1.7E-06 48.5 4.4 92 122-232 170-269 (344)
329 3two_A Mannitol dehydrogenase; 93.6 0.09 3.1E-06 46.9 5.8 89 120-232 174-265 (348)
330 3fpc_A NADP-dependent alcohol 93.6 0.011 3.7E-07 53.1 -0.4 93 120-231 164-265 (352)
331 2uyo_A Hypothetical protein ML 93.5 0.3 1E-05 43.2 8.8 110 124-235 104-221 (310)
332 3gms_A Putative NADPH:quinone 93.0 0.02 6.7E-07 51.1 0.3 93 120-232 142-243 (340)
333 3fbg_A Putative arginate lyase 93.0 0.2 6.7E-06 44.7 6.9 91 122-231 150-247 (346)
334 1rjw_A ADH-HT, alcohol dehydro 92.8 0.22 7.4E-06 44.2 7.0 93 120-232 162-261 (339)
335 2hcy_A Alcohol dehydrogenase 1 92.7 0.21 7E-06 44.5 6.6 94 120-232 167-269 (347)
336 3ip1_A Alcohol dehydrogenase, 92.4 0.095 3.2E-06 47.9 4.0 98 120-232 211-318 (404)
337 1vj0_A Alcohol dehydrogenase, 92.2 0.028 9.4E-07 51.1 0.2 93 121-232 194-298 (380)
338 3jv7_A ADH-A; dehydrogenase, n 92.2 0.046 1.6E-06 48.8 1.6 94 120-232 169-270 (345)
339 2d8a_A PH0655, probable L-thre 91.8 0.036 1.2E-06 49.6 0.4 92 122-232 167-267 (348)
340 1pqw_A Polyketide synthase; ro 91.7 0.028 9.6E-07 45.8 -0.4 93 120-232 36-137 (198)
341 1jvb_A NAD(H)-dependent alcoho 91.7 0.25 8.6E-06 43.9 5.9 94 120-232 168-271 (347)
342 3nx4_A Putative oxidoreductase 91.0 0.68 2.3E-05 40.5 8.0 88 125-232 149-241 (324)
343 2j3h_A NADP-dependent oxidored 90.6 0.53 1.8E-05 41.6 6.9 94 120-232 153-255 (345)
344 2c0c_A Zinc binding alcohol de 90.5 0.72 2.4E-05 41.3 7.7 93 120-232 161-261 (362)
345 3tqh_A Quinone oxidoreductase; 90.0 0.55 1.9E-05 41.2 6.5 93 120-232 150-245 (321)
346 4a2c_A Galactitol-1-phosphate 89.8 0.17 5.7E-06 44.9 2.9 96 120-234 158-262 (346)
347 1yqd_A Sinapyl alcohol dehydro 89.1 0.25 8.6E-06 44.4 3.5 92 122-232 187-282 (366)
348 4eez_A Alcohol dehydrogenase 1 88.7 0.15 5.3E-06 45.2 1.8 94 120-232 161-263 (348)
349 2dq4_A L-threonine 3-dehydroge 88.7 0.024 8.2E-07 50.6 -3.5 91 122-232 164-262 (343)
350 2b5w_A Glucose dehydrogenase; 88.5 0.17 5.9E-06 45.2 2.0 88 124-232 174-273 (357)
351 2dph_A Formaldehyde dismutase; 87.9 0.52 1.8E-05 42.8 4.8 99 120-232 183-299 (398)
352 2qrv_A DNA (cytosine-5)-methyl 87.8 0.63 2.1E-05 40.8 5.2 42 122-163 15-60 (295)
353 4hp8_A 2-deoxy-D-gluconate 3-d 87.2 10 0.00035 32.1 12.3 83 118-207 4-91 (247)
354 1tt7_A YHFP; alcohol dehydroge 87.1 0.59 2E-05 41.0 4.6 93 122-232 149-247 (330)
355 1xg5_A ARPG836; short chain de 86.6 3.6 0.00012 34.9 9.3 80 121-205 30-121 (279)
356 1xa0_A Putative NADPH dependen 86.6 0.63 2.1E-05 40.8 4.5 91 122-232 148-246 (328)
357 3gqv_A Enoyl reductase; medium 86.5 4.1 0.00014 36.3 10.0 93 121-232 163-263 (371)
358 3is3_A 17BETA-hydroxysteroid d 85.7 3.4 0.00012 34.9 8.6 107 120-232 15-152 (270)
359 3v2g_A 3-oxoacyl-[acyl-carrier 85.4 4.7 0.00016 34.2 9.4 106 120-231 28-164 (271)
360 1kol_A Formaldehyde dehydrogen 85.3 1.1 3.6E-05 40.6 5.5 98 121-232 184-300 (398)
361 3o26_A Salutaridine reductase; 85.2 10 0.00036 32.0 11.7 81 120-206 9-102 (311)
362 3me5_A Cytosine-specific methy 85.0 1 3.5E-05 42.3 5.3 41 123-163 88-130 (482)
363 1gu7_A Enoyl-[acyl-carrier-pro 84.8 1.8 6.3E-05 38.4 6.7 96 121-232 165-275 (364)
364 3ado_A Lambda-crystallin; L-gu 84.5 1.2 4.2E-05 39.4 5.3 98 123-228 6-119 (319)
365 4fn4_A Short chain dehydrogena 84.1 3.5 0.00012 35.1 7.9 80 120-205 4-94 (254)
366 4egf_A L-xylulose reductase; s 83.2 5.4 0.00019 33.6 8.8 83 120-207 17-110 (266)
367 3p2y_A Alanine dehydrogenase/p 83.1 2.8 9.6E-05 38.1 7.1 41 121-161 182-225 (381)
368 3tka_A Ribosomal RNA small sub 83.0 1.5 5.3E-05 39.1 5.3 40 121-160 56-99 (347)
369 3iei_A Leucine carboxyl methyl 82.9 9.4 0.00032 33.9 10.5 111 123-234 91-231 (334)
370 1piw_A Hypothetical zinc-type 82.8 1.3 4.5E-05 39.4 4.9 42 120-161 177-221 (360)
371 3uog_A Alcohol dehydrogenase; 82.7 1.6 5.5E-05 38.9 5.4 92 120-232 187-287 (363)
372 3ijr_A Oxidoreductase, short c 82.1 5 0.00017 34.4 8.2 80 120-205 44-135 (291)
373 3oig_A Enoyl-[acyl-carrier-pro 81.7 7.9 0.00027 32.3 9.2 81 120-205 4-97 (266)
374 3hwr_A 2-dehydropantoate 2-red 81.7 6.1 0.00021 34.4 8.8 101 120-232 16-120 (318)
375 1zsy_A Mitochondrial 2-enoyl t 81.7 7.9 0.00027 34.2 9.6 32 120-151 165-199 (357)
376 2hwk_A Helicase NSP2; rossman 81.0 7.6 0.00026 33.8 8.6 83 194-277 205-298 (320)
377 3pxx_A Carveol dehydrogenase; 80.8 6.6 0.00023 33.1 8.5 81 120-206 7-110 (287)
378 3grk_A Enoyl-(acyl-carrier-pro 80.8 12 0.00042 31.9 10.3 106 120-232 28-169 (293)
379 1y1p_A ARII, aldehyde reductas 79.8 15 0.00052 31.4 10.7 81 120-206 8-94 (342)
380 4g81_D Putative hexonate dehyd 79.3 3.2 0.00011 35.4 5.9 82 120-207 6-98 (255)
381 1h2b_A Alcohol dehydrogenase; 78.2 2.8 9.5E-05 37.3 5.4 41 120-160 184-228 (359)
382 3e8x_A Putative NAD-dependent 77.9 19 0.00065 29.2 10.2 75 120-209 18-98 (236)
383 3pi7_A NADH oxidoreductase; gr 77.6 11 0.00039 32.9 9.3 88 124-232 166-263 (349)
384 3dmg_A Probable ribosomal RNA 77.0 4.4 0.00015 36.6 6.4 103 122-248 45-153 (381)
385 1xhl_A Short-chain dehydrogena 76.5 8.6 0.00029 33.0 7.9 81 121-205 24-116 (297)
386 3o38_A Short chain dehydrogena 76.1 9.6 0.00033 31.8 8.0 82 120-206 19-112 (266)
387 1g60_A Adenine-specific methyl 76.1 5.7 0.00019 33.6 6.6 23 210-232 52-74 (260)
388 1g0o_A Trihydroxynaphthalene r 76.0 7.9 0.00027 32.8 7.5 105 121-232 27-163 (283)
389 2cf5_A Atccad5, CAD, cinnamyl 75.2 3.4 0.00012 36.6 5.1 39 122-160 180-221 (357)
390 4fs3_A Enoyl-[acyl-carrier-pro 75.0 11 0.00038 31.6 8.1 80 120-204 3-95 (256)
391 2gdz_A NAD+-dependent 15-hydro 74.8 10 0.00036 31.6 7.9 88 121-213 5-104 (267)
392 3u5t_A 3-oxoacyl-[acyl-carrier 74.8 6.6 0.00023 33.2 6.7 80 121-206 25-116 (267)
393 3iup_A Putative NADPH:quinone 74.7 3.3 0.00011 37.1 4.9 41 121-161 169-214 (379)
394 3ucx_A Short chain dehydrogena 74.7 14 0.00047 30.9 8.6 80 120-205 8-98 (264)
395 3goh_A Alcohol dehydrogenase, 74.6 2.9 0.0001 36.2 4.4 87 120-231 140-228 (315)
396 2eih_A Alcohol dehydrogenase; 74.3 4.3 0.00015 35.7 5.5 93 120-232 164-265 (343)
397 3jyn_A Quinone oxidoreductase; 74.3 3.5 0.00012 35.9 4.9 93 120-232 138-239 (325)
398 1zkd_A DUF185; NESG, RPR58, st 74.3 7 0.00024 35.5 6.9 59 103-162 62-129 (387)
399 1v3u_A Leukotriene B4 12- hydr 74.2 3.6 0.00012 35.9 4.9 93 120-232 143-244 (333)
400 3qwb_A Probable quinone oxidor 74.1 3.6 0.00012 36.0 4.9 93 120-232 146-247 (334)
401 1boo_A Protein (N-4 cytosine-s 73.7 7.3 0.00025 34.2 6.8 42 192-234 30-86 (323)
402 4ft4_B DNA (cytosine-5)-methyl 73.7 3.1 0.00011 41.2 4.9 40 124-163 213-260 (784)
403 4eye_A Probable oxidoreductase 73.5 3.9 0.00013 36.0 5.0 93 120-232 157-257 (342)
404 1iz0_A Quinone oxidoreductase; 73.2 2.7 9.2E-05 36.2 3.8 90 120-232 123-218 (302)
405 3swr_A DNA (cytosine-5)-methyl 73.0 4.7 0.00016 41.3 5.9 41 123-163 540-583 (1002)
406 2x9g_A PTR1, pteridine reducta 72.6 42 0.0014 28.2 11.7 78 121-205 21-116 (288)
407 3gaf_A 7-alpha-hydroxysteroid 72.6 13 0.00045 30.9 8.0 81 120-206 9-100 (256)
408 3ioy_A Short-chain dehydrogena 72.5 14 0.00048 32.0 8.4 83 120-206 5-98 (319)
409 2y0c_A BCEC, UDP-glucose dehyd 72.1 12 0.00042 34.7 8.3 99 122-231 7-127 (478)
410 3l77_A Short-chain alcohol deh 72.1 9 0.00031 31.3 6.7 78 123-206 2-91 (235)
411 3h7a_A Short chain dehydrogena 71.9 11 0.00037 31.4 7.3 80 121-206 5-94 (252)
412 2cdc_A Glucose dehydrogenase g 71.9 4.2 0.00014 36.1 4.9 89 123-232 181-278 (366)
413 3ojo_A CAP5O; rossmann fold, c 71.8 27 0.00091 32.1 10.3 41 121-161 9-52 (431)
414 3lf2_A Short chain oxidoreduct 71.0 19 0.00063 30.1 8.6 83 120-206 5-98 (265)
415 4f6c_A AUSA reductase domain p 70.8 53 0.0018 29.3 12.2 83 121-205 67-160 (427)
416 3gg2_A Sugar dehydrogenase, UD 70.8 23 0.00079 32.6 9.8 99 124-233 3-123 (450)
417 3i1j_A Oxidoreductase, short c 70.6 13 0.00045 30.4 7.5 82 119-206 10-105 (247)
418 3tnl_A Shikimate dehydrogenase 70.3 4.1 0.00014 35.9 4.3 33 120-153 151-187 (315)
419 3r3s_A Oxidoreductase; structu 70.1 14 0.00047 31.6 7.7 80 120-205 46-138 (294)
420 4a7p_A UDP-glucose dehydrogena 70.0 12 0.00041 34.6 7.6 112 124-247 9-143 (446)
421 3zwc_A Peroxisomal bifunctiona 69.7 23 0.00079 34.9 10.0 96 124-228 317-425 (742)
422 4b7c_A Probable oxidoreductase 69.5 3.9 0.00013 35.8 4.0 94 120-232 147-248 (336)
423 3tjr_A Short chain dehydrogena 69.2 17 0.00057 31.2 8.0 80 121-206 29-119 (301)
424 3tos_A CALS11; methyltransfera 69.0 6 0.00021 33.8 5.0 132 123-257 70-245 (257)
425 3qiv_A Short-chain dehydrogena 69.0 16 0.00053 30.1 7.6 79 120-205 6-96 (253)
426 3pk0_A Short-chain dehydrogena 68.8 16 0.00053 30.6 7.6 82 120-206 7-99 (262)
427 3mog_A Probable 3-hydroxybutyr 68.7 27 0.00094 32.4 9.9 96 124-228 6-116 (483)
428 3ic5_A Putative saccharopine d 68.6 7 0.00024 27.8 4.7 69 122-204 4-78 (118)
429 4da9_A Short-chain dehydrogena 68.1 9.9 0.00034 32.3 6.3 80 120-205 26-117 (280)
430 4fgs_A Probable dehydrogenase 67.8 10 0.00036 32.5 6.3 41 120-160 26-70 (273)
431 1yb5_A Quinone oxidoreductase; 67.5 6.2 0.00021 34.9 5.0 93 120-232 168-269 (351)
432 4f3n_A Uncharacterized ACR, CO 67.4 9.2 0.00031 35.2 6.1 55 103-161 122-183 (432)
433 4dup_A Quinone oxidoreductase; 67.4 6.3 0.00021 34.8 5.0 93 120-232 165-265 (353)
434 3jyo_A Quinate/shikimate dehyd 67.2 6.6 0.00023 33.9 4.9 45 120-165 124-173 (283)
435 3krt_A Crotonyl COA reductase; 67.0 5.8 0.0002 36.5 4.8 42 120-161 226-271 (456)
436 3tfo_A Putative 3-oxoacyl-(acy 66.9 15 0.00053 30.8 7.2 79 122-206 3-92 (264)
437 4dry_A 3-oxoacyl-[acyl-carrier 66.6 16 0.00053 31.0 7.2 81 120-206 30-122 (281)
438 3svt_A Short-chain type dehydr 66.5 19 0.00067 30.2 7.8 83 120-205 8-101 (281)
439 3f1l_A Uncharacterized oxidore 66.5 21 0.00073 29.5 8.0 81 120-205 9-102 (252)
440 2jah_A Clavulanic acid dehydro 66.1 24 0.00083 29.0 8.2 78 121-205 5-94 (247)
441 3t4x_A Oxidoreductase, short c 65.9 18 0.00061 30.2 7.4 84 120-207 7-97 (267)
442 3fwz_A Inner membrane protein 65.9 5.7 0.00019 29.9 3.8 36 123-160 7-47 (140)
443 2ew2_A 2-dehydropantoate 2-red 65.6 17 0.00058 30.9 7.3 99 124-231 4-107 (316)
444 4fc7_A Peroxisomal 2,4-dienoyl 65.5 24 0.00082 29.6 8.2 80 120-205 24-115 (277)
445 3nyw_A Putative oxidoreductase 65.0 25 0.00084 29.1 8.1 83 121-206 5-98 (250)
446 3rkr_A Short chain oxidoreduct 65.0 18 0.00061 30.1 7.2 79 120-205 26-116 (262)
447 3vtf_A UDP-glucose 6-dehydroge 65.0 7.6 0.00026 35.9 5.1 37 124-160 22-61 (444)
448 3r1i_A Short-chain type dehydr 64.9 18 0.00063 30.5 7.3 82 120-207 29-121 (276)
449 1wly_A CAAR, 2-haloacrylate re 64.9 8.1 0.00028 33.6 5.2 93 120-232 143-244 (333)
450 3ftp_A 3-oxoacyl-[acyl-carrier 64.8 18 0.00062 30.4 7.2 80 121-206 26-116 (270)
451 3rku_A Oxidoreductase YMR226C; 64.5 26 0.00088 29.8 8.2 80 121-205 31-125 (287)
452 4dkj_A Cytosine-specific methy 64.3 8.4 0.00029 35.1 5.2 43 123-165 10-60 (403)
453 3av4_A DNA (cytosine-5)-methyl 64.3 9.1 0.00031 40.3 6.0 42 122-163 850-894 (1330)
454 1f0y_A HCDH, L-3-hydroxyacyl-C 64.2 11 0.00038 32.3 5.9 40 124-163 16-58 (302)
455 3lyl_A 3-oxoacyl-(acyl-carrier 64.1 22 0.00077 29.0 7.6 79 121-206 3-93 (247)
456 3imf_A Short chain dehydrogena 63.9 14 0.00046 30.8 6.2 80 120-205 3-93 (257)
457 3llv_A Exopolyphosphatase-rela 63.8 12 0.00039 27.9 5.3 37 122-160 5-46 (141)
458 3rih_A Short chain dehydrogena 63.8 15 0.00051 31.5 6.6 82 120-206 38-130 (293)
459 1iy8_A Levodione reductase; ox 63.8 28 0.00096 28.9 8.3 81 120-205 10-102 (267)
460 2vn8_A Reticulon-4-interacting 63.8 9.4 0.00032 33.9 5.5 95 120-232 181-280 (375)
461 4dio_A NAD(P) transhydrogenase 63.6 8.8 0.0003 35.1 5.2 41 121-161 188-231 (405)
462 1x13_A NAD(P) transhydrogenase 63.6 8.9 0.0003 34.8 5.3 39 121-159 170-211 (401)
463 3slk_A Polyketide synthase ext 63.4 0.55 1.9E-05 46.9 -3.1 92 120-232 343-442 (795)
464 4imr_A 3-oxoacyl-(acyl-carrier 63.4 16 0.00054 30.9 6.6 81 120-206 30-120 (275)
465 1xu9_A Corticosteroid 11-beta- 63.2 25 0.00085 29.6 7.9 77 120-202 25-113 (286)
466 3gaz_A Alcohol dehydrogenase s 63.1 9.2 0.00031 33.5 5.2 90 120-231 148-245 (343)
467 1pzg_A LDH, lactate dehydrogen 62.9 45 0.0016 29.1 9.7 102 122-231 8-131 (331)
468 2rhc_B Actinorhodin polyketide 62.6 28 0.00094 29.3 8.0 79 121-206 20-110 (277)
469 1yxm_A Pecra, peroxisomal tran 62.4 27 0.00092 29.5 8.0 84 120-205 15-110 (303)
470 3kvo_A Hydroxysteroid dehydrog 62.4 28 0.00096 30.6 8.3 81 120-206 42-140 (346)
471 3k6j_A Protein F01G10.3, confi 62.4 55 0.0019 30.3 10.5 97 124-229 55-163 (460)
472 1eg2_A Modification methylase 62.0 7.5 0.00026 34.1 4.4 43 193-236 56-110 (319)
473 3pwz_A Shikimate dehydrogenase 62.0 24 0.00082 30.1 7.5 37 120-157 117-158 (272)
474 1qor_A Quinone oxidoreductase; 61.7 7.6 0.00026 33.7 4.3 93 120-232 138-239 (327)
475 1zem_A Xylitol dehydrogenase; 61.6 28 0.00095 28.9 7.8 79 121-206 5-95 (262)
476 4a0s_A Octenoyl-COA reductase/ 61.5 8.6 0.00029 35.1 4.8 98 120-232 218-336 (447)
477 3sju_A Keto reductase; short-c 61.4 25 0.00084 29.7 7.5 81 120-206 21-112 (279)
478 1yb1_A 17-beta-hydroxysteroid 61.1 35 0.0012 28.4 8.4 80 120-206 28-119 (272)
479 2zig_A TTHA0409, putative modi 61.0 6.9 0.00024 33.8 3.9 58 175-233 21-98 (297)
480 1lu9_A Methylene tetrahydromet 60.6 14 0.00047 31.5 5.7 78 121-205 117-198 (287)
481 3v8b_A Putative dehydrogenase, 60.5 24 0.00082 29.9 7.3 79 121-205 26-115 (283)
482 1ae1_A Tropinone reductase-I; 60.1 33 0.0011 28.6 8.1 79 121-206 19-110 (273)
483 2vhw_A Alanine dehydrogenase; 59.6 17 0.00058 32.6 6.3 38 121-160 166-208 (377)
484 3i83_A 2-dehydropantoate 2-red 59.6 12 0.0004 32.5 5.2 99 124-232 3-105 (320)
485 2j8z_A Quinone oxidoreductase; 59.6 9.2 0.00031 33.7 4.5 93 120-232 160-261 (354)
486 1l7d_A Nicotinamide nucleotide 59.5 9.9 0.00034 34.1 4.8 41 120-160 169-212 (384)
487 2ae2_A Protein (tropinone redu 59.4 31 0.0011 28.5 7.7 79 121-206 7-98 (260)
488 3uf0_A Short-chain dehydrogena 59.2 30 0.001 29.1 7.6 82 120-207 28-118 (273)
489 4f6l_B AUSA reductase domain p 59.2 59 0.002 29.8 10.3 80 123-204 150-240 (508)
490 1vl8_A Gluconate 5-dehydrogena 58.8 38 0.0013 28.2 8.2 80 120-206 18-110 (267)
491 1mv8_A GMD, GDP-mannose 6-dehy 58.5 45 0.0016 30.2 9.2 36 125-160 2-40 (436)
492 3c85_A Putative glutathione-re 58.4 13 0.00044 29.1 4.9 38 121-160 37-80 (183)
493 3awd_A GOX2181, putative polyo 57.9 39 0.0013 27.6 8.0 78 121-205 11-100 (260)
494 1pjc_A Protein (L-alanine dehy 57.8 15 0.0005 32.7 5.6 41 121-161 165-208 (361)
495 2zat_A Dehydrogenase/reductase 57.7 33 0.0011 28.3 7.6 79 120-205 11-101 (260)
496 2g1u_A Hypothetical protein TM 57.7 10 0.00036 28.9 4.1 36 120-157 16-56 (155)
497 4b79_A PA4098, probable short- 57.7 13 0.00045 31.3 5.0 75 120-206 8-89 (242)
498 3o8q_A Shikimate 5-dehydrogena 57.5 31 0.001 29.6 7.4 40 120-160 123-167 (281)
499 4ibo_A Gluconate dehydrogenase 57.3 17 0.00059 30.6 5.7 81 120-206 23-114 (271)
500 3tox_A Short chain dehydrogena 57.3 14 0.00047 31.4 5.2 80 121-206 6-96 (280)
No 1
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.88 E-value=3.4e-22 Score=177.72 Aligned_cols=184 Identities=26% Similarity=0.307 Sum_probs=126.2
Q ss_pred CCCcCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec--hhHHHHHHHHHHHhhc
Q 023543 92 PGVTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGA-QVILTDL--PDRLRLLKKNIENNLR 168 (281)
Q Consensus 92 ~g~tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~--~~~l~~~~~N~~~n~~ 168 (281)
...+|..+|+++..|++|+..... ..++++|||||||+|.+++.+++.|+ +|+++|+ +.+++.+++|+..|..
T Consensus 53 ~~~~g~~~~~~~~~l~~~l~~~~~----~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~ 128 (281)
T 3bzb_A 53 HPLWTSHVWSGARALADTLCWQPE----LIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTA 128 (281)
T ss_dssp ---------CHHHHHHHHHHHCGG----GTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC
T ss_pred CCCCCceeecHHHHHHHHHHhcch----hcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhh
Confidence 455788999999999999987532 35788999999999999999999887 8999999 4789999999965532
Q ss_pred CCC-----CCCceEEEEEecCCCCCCCc---CCCCCcEEEEccccCCCCcHHHHHHHHHHhhC---C--CcEEEEEEeee
Q 023543 169 HGD-----LRGSAVVTELTWGDDPDQDL---IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCG---T--QTTIFLAGELR 235 (281)
Q Consensus 169 ~~~-----~~~~i~~~~l~w~~~~~~~~---~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~---~--~g~~~l~~~~r 235 (281)
... ...++.+..++|++...... ...+||+|+++|++|+...+..+++.+.++|+ | +|.++++...+
T Consensus 129 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~ 208 (281)
T 3bzb_A 129 NSCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHH 208 (281)
T ss_dssp ----------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-
T ss_pred hhcccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEee
Confidence 110 11368889999987543221 35789999999999999999999999999999 9 99988776654
Q ss_pred Ch---hHHHHHHHHHh-cC-CeEEEE-ecCCCCCCCCC--------CcEEEEEEEecC
Q 023543 236 ND---SVLEYFLEAAM-KD-FVIGRV-EQTQWHPDYCS--------PRVVVYILVKKL 279 (281)
Q Consensus 236 ~~---~~~~~fl~~~~-~~-f~v~~i-~~~~~~~~~~~--------~~~~i~~~~~k~ 279 (281)
.. .....|++.+. .| |.+..+ ....|.+.|.. ..+.+|.+++++
T Consensus 209 ~~~~~~~~~~~~~~l~~~G~f~v~~~~~~~~~~~~f~~~~~~~~~r~~V~~~~l~~~~ 266 (281)
T 3bzb_A 209 RPHLAERDLAFFRLVNADGALIAEPWLSPLQMDPMFPDDPGDVCIRGQVHRWRLRWRS 266 (281)
T ss_dssp -------CTHHHHHHHHSTTEEEEEEECCC------------------CEEEEEEEC-
T ss_pred ecccchhHHHHHHHHHhcCCEEEEEeccccccccccccCCcchhccceEEEEEEEccc
Confidence 42 12345777766 48 999888 33345555432 367788887764
No 2
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.76 E-value=7.6e-18 Score=147.48 Aligned_cols=186 Identities=19% Similarity=0.155 Sum_probs=135.4
Q ss_pred CCCchhhhHHHhhccCCCCCCCCCcccccccceEEEecCCceEEEEeCCCCCCCCCCcCceecchHHHHHHHHhhhhccC
Q 023543 38 ESESAAEETMLLWGIQQPTLSKPNAFVAQSSLNLRIDACGHSLSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSG 117 (281)
Q Consensus 38 ~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~~~~~~~~~g~~l~i~q~~~~~~~~g~tG~~~W~~s~~la~~l~~~~~~~ 117 (281)
+++||.+.+...| +|..... .+|.+.+.. + ....+.+..+|+.+++.|+ ++++..+.+++...
T Consensus 55 ~~~dw~~~~~~~~---~p~~~~~-~~i~~~w~~---~-~~~~~~~~l~p~~~fgtg~-----~~tt~~~~~~l~~~---- 117 (254)
T 2nxc_A 55 GDEDWLEAWRRDL---KPALAPP-FVVLAPWHT---W-EGAEIPLVIEPGMAFGTGH-----HETTRLALKALARH---- 117 (254)
T ss_dssp CHHHHHHHHHHHC---CCEEETT-EEEECTTCC---C-CSSSEEEECCCC-----CC-----SHHHHHHHHHHHHH----
T ss_pred ChhHHHHHHHhhC---CCEEEec-EEEeCCCCC---C-CCCceEEEECCCccccCCC-----CHHHHHHHHHHHHh----
Confidence 5677888887777 6776556 677776655 2 2345677778877654443 78888888888764
Q ss_pred ccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 118 MLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 118 ~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
..++++|||+|||+|.+++.+++.|++|+++|+ +.+++.+++|+..|+.. +.+...++.+. +...+|
T Consensus 118 --~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~------v~~~~~d~~~~----~~~~~f 185 (254)
T 2nxc_A 118 --LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVR------PRFLEGSLEAA----LPFGPF 185 (254)
T ss_dssp --CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCC------CEEEESCHHHH----GGGCCE
T ss_pred --cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCc------EEEEECChhhc----CcCCCC
Confidence 346889999999999999999999999999999 88999999999998753 55555444321 334689
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEe
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVE 257 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~ 257 (281)
|+|+++.+. ..+..+++.+.++|+|||.++++....... +.+.+.+. .||.+..+.
T Consensus 186 D~Vv~n~~~---~~~~~~l~~~~~~LkpgG~lils~~~~~~~--~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 186 DLLVANLYA---ELHAALAPRYREALVPGGRALLTGILKDRA--PLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp EEEEEECCH---HHHHHHHHHHHHHEEEEEEEEEEEEEGGGH--HHHHHHHHHTTCEEEEEE
T ss_pred CEEEECCcH---HHHHHHHHHHHHHcCCCCEEEEEeeccCCH--HHHHHHHHHCCCEEEEEe
Confidence 999986432 346789999999999999999987665432 33455555 489987764
No 3
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.71 E-value=4.8e-16 Score=143.83 Aligned_cols=184 Identities=15% Similarity=0.144 Sum_probs=135.1
Q ss_pred cccceEEEecCCceEEEEeCCCCCCCCCCcCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCC
Q 023543 66 QSSLNLRIDACGHSLSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGA 145 (281)
Q Consensus 66 ~~~~~~~~~~~g~~l~i~q~~~~~~~~g~tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~ 145 (281)
+.+.+++..+.+..+++...++.++..+ +.+++..+.+++...... ...++++|||+|||+|.+++.+++.++
T Consensus 184 ~~w~~~~~~~~g~~~~~~~~pgvFs~~~-----~d~~t~~ll~~l~~~l~~--~~~~~~~VLDlGcG~G~~~~~la~~g~ 256 (381)
T 3dmg_A 184 SLWRAFSARILGAEYTFHHLPGVFSAGK-----VDPASLLLLEALQERLGP--EGVRGRQVLDLGAGYGALTLPLARMGA 256 (381)
T ss_dssp CCCEEEEEEETTEEEEEEECTTCTTTTS-----CCHHHHHHHHHHHHHHCT--TTTTTCEEEEETCTTSTTHHHHHHTTC
T ss_pred cccceeeEEecCceEEEEeCCCceeCCC-----CCHHHHHHHHHHHHhhcc--cCCCCCEEEEEeeeCCHHHHHHHHcCC
Confidence 3455667777899999999998876443 367888888888754210 124788999999999999999999999
Q ss_pred EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCC-----CCcHHHHHHHHH
Q 023543 146 QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYS-----EGAVGDLLDTLL 219 (281)
Q Consensus 146 ~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~-----~~~~~~ll~~l~ 219 (281)
+|+++|+ +.+++.+++|+..|+.. +.+...|+.+ ....+.+||+|+++.++++ ......+++.+.
T Consensus 257 ~V~gvDis~~al~~A~~n~~~~~~~------v~~~~~D~~~---~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~ 327 (381)
T 3dmg_A 257 EVVGVEDDLASVLSLQKGLEANALK------AQALHSDVDE---ALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAA 327 (381)
T ss_dssp EEEEEESBHHHHHHHHHHHHHTTCC------CEEEECSTTT---TSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCC------eEEEEcchhh---ccccCCCeEEEEECCchhhcccccHHHHHHHHHHHH
Confidence 9999999 88999999999998754 5566655432 2223468999999888776 566789999999
Q ss_pred HhhCCCcEEEEEEeeeChhHHHHHHHHHhcCCeEEEEecCCCCCCCCCCcEEEEEEEec
Q 023543 220 QLCGTQTTIFLAGELRNDSVLEYFLEAAMKDFVIGRVEQTQWHPDYCSPRVVVYILVKK 278 (281)
Q Consensus 220 ~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~~f~v~~i~~~~~~~~~~~~~~~i~~~~~k 278 (281)
++|+|||.++++...... ++.+++......+. +. ..+|.||...+.
T Consensus 328 ~~LkpGG~l~iv~n~~l~--~~~~l~~~f~~v~~--l~---------~~gF~Vl~a~~~ 373 (381)
T 3dmg_A 328 ARLRPGGVFFLVSNPFLK--YEPLLEEKFGAFQT--LK---------VAEYKVLFAEKR 373 (381)
T ss_dssp HHEEEEEEEEEEECTTSC--HHHHHHHHHSCCEE--EE---------ESSSEEEEEECC
T ss_pred HhcCcCcEEEEEEcCCCC--hHHHHHHhhccEEE--Ee---------CCCEEEEEEEEe
Confidence 999999999988654332 23344444333332 22 347777777664
No 4
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.69 E-value=5.2e-16 Score=135.82 Aligned_cols=179 Identities=17% Similarity=0.171 Sum_probs=125.8
Q ss_pred cCCceEEEEeCCCCCCCCCCcCceecchHHHHHHHHhhhhccCcccc-CCCeEEEECCCcCHHHHHHHHcCC-EEEEEec
Q 023543 75 ACGHSLSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSGMLLL-HGKKIVELGSGCGLVGCIAALLGA-QVILTDL 152 (281)
Q Consensus 75 ~~g~~l~i~q~~~~~~~~g~tG~~~W~~s~~la~~l~~~~~~~~~~~-~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~ 152 (281)
..+..+.|.|.++.+ +....+.+|+.|+. .. ++++|||+|||+|.+++.+++.+. +|+++|+
T Consensus 17 ~~~~~~~i~q~~~~~--------~~~~d~~ll~~~~~--------~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi 80 (259)
T 3lpm_A 17 LLAENLRIIQSPSVF--------SFSIDAVLLAKFSY--------LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEI 80 (259)
T ss_dssp ETTTTEEEEEBTTTB--------CCCHHHHHHHHHCC--------CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECC
T ss_pred ccCCCEEEEeCCCCc--------cCcHHHHHHHHHhc--------CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEEC
Confidence 345678999988543 33445788888863 23 688999999999999999998766 8999999
Q ss_pred -hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCCC--------------------CcH
Q 023543 153 -PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSE--------------------GAV 211 (281)
Q Consensus 153 -~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~--------------------~~~ 211 (281)
+.+++.+++|+..|+.. +++.+...|+.+... .+...+||+|+++.+.+.. ..+
T Consensus 81 ~~~~~~~a~~n~~~~~~~----~~v~~~~~D~~~~~~-~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~ 155 (259)
T 3lpm_A 81 QERLADMAKRSVAYNQLE----DQIEIIEYDLKKITD-LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL 155 (259)
T ss_dssp SHHHHHHHHHHHHHTTCT----TTEEEECSCGGGGGG-TSCTTCEEEEEECCCC-----------------------HHH
T ss_pred CHHHHHHHHHHHHHCCCc----ccEEEEECcHHHhhh-hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCH
Confidence 88999999999999876 568888876644321 1335789999997665543 235
Q ss_pred HHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEecCCCCCCCCCCcEEEEEEEec
Q 023543 212 GDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVEQTQWHPDYCSPRVVVYILVKK 278 (281)
Q Consensus 212 ~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~~~~~~~~~~~~~~~i~~~~~k 278 (281)
..+++.+.++|+|||.+++...... ...++..+. .+|.+..+..-.-.+. +.....+....|.
T Consensus 156 ~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~l~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~k~ 219 (259)
T 3lpm_A 156 EDTIRVAASLLKQGGKANFVHRPER---LLDIIDIMRKYRLEPKRIQFVHPRSD-REANTVLVEGIKD 219 (259)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECTTT---HHHHHHHHHHTTEEEEEEEEEESSTT-SCCSEEEEEEEET
T ss_pred HHHHHHHHHHccCCcEEEEEEcHHH---HHHHHHHHHHCCCceEEEEEeecCCC-CCcEEEEEEEEeC
Confidence 6799999999999999988654333 234555555 4888777654322222 2334555555553
No 5
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.65 E-value=2.2e-14 Score=118.34 Aligned_cols=146 Identities=14% Similarity=0.150 Sum_probs=107.3
Q ss_pred EEEecCCceEEEEeCCCCCCCCCCcCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEE
Q 023543 71 LRIDACGHSLSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILT 150 (281)
Q Consensus 71 ~~~~~~g~~l~i~q~~~~~~~~g~tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~t 150 (281)
+.....+..+.+...++.+.... ....+..+.+++. ..++.+|||+|||+|..++.+++.+.+|+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~--------~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~ 80 (194)
T 1dus_A 14 VEDILRGKKLKFKTDSGVFSYGK-----VDKGTKILVENVV--------VDKDDDILDLGCGYGVIGIALADEVKSTTMA 80 (194)
T ss_dssp EEEEETTEEEEEEEETTSTTTTS-----CCHHHHHHHHHCC--------CCTTCEEEEETCTTSHHHHHHGGGSSEEEEE
T ss_pred EeeecCCCceEEEeCCCcCCccc-----cchHHHHHHHHcc--------cCCCCeEEEeCCCCCHHHHHHHHcCCeEEEE
Confidence 34445688888877665543111 1233444444432 2367899999999999999999888899999
Q ss_pred ec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCC-CCcHHHHHHHHHHhhCCCcEE
Q 023543 151 DL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYS-EGAVGDLLDTLLQLCGTQTTI 228 (281)
Q Consensus 151 D~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~-~~~~~~ll~~l~~ll~~~g~~ 228 (281)
|+ +.+++.+++|+..++.. ..++.+...++.+. ....+||+|++..++++ ......+++.+.++|+|||.+
T Consensus 81 D~~~~~~~~a~~~~~~~~~~---~~~~~~~~~d~~~~----~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l 153 (194)
T 1dus_A 81 DINRRAIKLAKENIKLNNLD---NYDIRVVHSDLYEN----VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEI 153 (194)
T ss_dssp ESCHHHHHHHHHHHHHTTCT---TSCEEEEECSTTTT----CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEE
T ss_pred ECCHHHHHHHHHHHHHcCCC---ccceEEEECchhcc----cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEE
Confidence 99 88999999999988764 01388888766542 23468999999877665 466789999999999999999
Q ss_pred EEEEeeeC
Q 023543 229 FLAGELRN 236 (281)
Q Consensus 229 ~l~~~~r~ 236 (281)
++......
T Consensus 154 ~~~~~~~~ 161 (194)
T 1dus_A 154 WVVIQTKQ 161 (194)
T ss_dssp EEEEESTH
T ss_pred EEEECCCC
Confidence 88877553
No 6
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.64 E-value=9.5e-15 Score=134.88 Aligned_cols=176 Identities=15% Similarity=0.128 Sum_probs=121.7
Q ss_pred EEEecCCceEEEEeCCCCCCCCCCcCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc--CCEEE
Q 023543 71 LRIDACGHSLSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL--GAQVI 148 (281)
Q Consensus 71 ~~~~~~g~~l~i~q~~~~~~~~g~tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~--g~~V~ 148 (281)
..+.+.+..+++.+.++.++..+ +..++..+.+++. ...+++|||+|||+|.+++.+++. +.+|+
T Consensus 184 ~~~~~~~~~~~~~~~pg~Fs~~~-----~d~~~~~ll~~l~--------~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~ 250 (375)
T 4dcm_A 184 VSWKLEGTDWTIHNHANVFSRTG-----LDIGARFFMQHLP--------ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVV 250 (375)
T ss_dssp EEEEETTTTEEEEECTTCTTCSS-----CCHHHHHHHHTCC--------CSCCSEEEEETCTTCHHHHHHHHHCTTCEEE
T ss_pred eEEEecCCceEEEeCCCcccCCc-----ccHHHHHHHHhCc--------ccCCCeEEEEeCcchHHHHHHHHHCCCCEEE
Confidence 34455688899999998876333 3566666655543 234589999999999999999987 57899
Q ss_pred EEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCC-----CCcHHHHHHHHHHhh
Q 023543 149 LTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYS-----EGAVGDLLDTLLQLC 222 (281)
Q Consensus 149 ~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~-----~~~~~~ll~~l~~ll 222 (281)
++|+ +.+++.+++|+..|+... ..++.+...|..+ .+...+||+|+++.+++. ......+++.+.++|
T Consensus 251 gvD~s~~al~~Ar~n~~~ngl~~--~~~v~~~~~D~~~----~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~L 324 (375)
T 4dcm_A 251 FVDESPMAVASSRLNVETNMPEA--LDRCEFMINNALS----GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCL 324 (375)
T ss_dssp EEESCHHHHHHHHHHHHHHCGGG--GGGEEEEECSTTT----TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHE
T ss_pred EEECcHHHHHHHHHHHHHcCCCc--CceEEEEechhhc----cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhC
Confidence 9999 889999999999998641 1145555544332 234568999999888764 334557999999999
Q ss_pred CCCcEEEEEEeeeChhHHHHHHHHHhcCCeEEEEecCCCCCCCCCCcEEEEEEEe
Q 023543 223 GTQTTIFLAGELRNDSVLEYFLEAAMKDFVIGRVEQTQWHPDYCSPRVVVYILVK 277 (281)
Q Consensus 223 ~~~g~~~l~~~~r~~~~~~~fl~~~~~~f~v~~i~~~~~~~~~~~~~~~i~~~~~ 277 (281)
+|||.++++...... ....++.....+ +.+. +..+|.||....
T Consensus 325 kpgG~l~iv~n~~~~--~~~~l~~~fg~~--~~~a--------~~~~F~V~~~~~ 367 (375)
T 4dcm_A 325 KINGELYIVANRHLD--YFHKLKKIFGNC--TTIA--------TNNKFVVLKAVK 367 (375)
T ss_dssp EEEEEEEEEEETTSC--HHHHHHHHHSCC--EEEE--------ECSSEEEEEEEC
T ss_pred CCCcEEEEEEECCcC--HHHHHHHhcCCE--EEEe--------eCCCEEEEEEcC
Confidence 999999987654332 233444433333 3333 345777776654
No 7
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.63 E-value=2.3e-15 Score=128.42 Aligned_cols=110 Identities=14% Similarity=0.171 Sum_probs=90.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||+|||+|..++.++..+.+|+++|+ +.+++.+++++..++.......++.+...+.. ...+.+.+||+|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~D~v 105 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENAS---SLSFHDSSFDFA 105 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTT---SCCSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccc---ccCCCCCceeEE
Confidence 46889999999999999999999999999999 88999999998887664222345666665543 223456789999
Q ss_pred EEccccCCCCcHH---HHHHHHHHhhCCCcEEEEEEe
Q 023543 200 LGSDVIYSEGAVG---DLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 200 ia~d~iy~~~~~~---~ll~~l~~ll~~~g~~~l~~~ 233 (281)
++..++++..... .+++.+.++|+|||.+++...
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 9999999877666 899999999999999988754
No 8
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.62 E-value=5.1e-15 Score=124.47 Aligned_cols=176 Identities=15% Similarity=0.119 Sum_probs=121.2
Q ss_pred CCCCCCCcccccccceEEEecCCceEEEEeCCCCCCCCCCcCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcC
Q 023543 55 PTLSKPNAFVAQSSLNLRIDACGHSLSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCG 134 (281)
Q Consensus 55 p~~~~~~~~v~~~~~~~~~~~~g~~l~i~q~~~~~~~~g~tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG 134 (281)
|...+...++.+.+..+... ......+..+++...+.+ .++.+..+.+++... ..++++|||+|||+|
T Consensus 5 ~~~~~~~~~~~p~w~~~~~~-~~~~~~~~~~~~~~f~~~-----~~~~~~~~~~~l~~~------~~~~~~vLDiG~G~G 72 (205)
T 3grz_A 5 VINLSRHLAIVPEWEDYQPV-FKDQEIIRLDPGLAFGTG-----NHQTTQLAMLGIERA------MVKPLTVADVGTGSG 72 (205)
T ss_dssp CEEEETTEEEEETTCCCCCS-STTCEEEEESCC-----C-----CHHHHHHHHHHHHHH------CSSCCEEEEETCTTS
T ss_pred cEEECCcEEEeccccccccC-CCCceeEEecCCcccCCC-----CCccHHHHHHHHHHh------ccCCCEEEEECCCCC
Confidence 33333333444444333210 234566666776533332 378888888888754 246789999999999
Q ss_pred HHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCCCCcHH
Q 023543 135 LVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSEGAVG 212 (281)
Q Consensus 135 ~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~~ 212 (281)
..++.+++.+. +|+++|+ +.+++.+++|+..++.. ++.+...|+.+. ...+||+|++..++ ..+.
T Consensus 73 ~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~-----~~~~fD~i~~~~~~---~~~~ 139 (205)
T 3grz_A 73 ILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY-----DIALQKTSLLAD-----VDGKFDLIVANILA---EILL 139 (205)
T ss_dssp HHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-----CCEEEESSTTTT-----CCSCEEEEEEESCH---HHHH
T ss_pred HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEecccccc-----CCCCceEEEECCcH---HHHH
Confidence 99999998876 8999999 88999999999998765 377777665432 34789999997655 2357
Q ss_pred HHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEe
Q 023543 213 DLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVE 257 (281)
Q Consensus 213 ~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~ 257 (281)
.+++.+.++|+|||.++++...... .+.+.+.+. .||.+..+.
T Consensus 140 ~~l~~~~~~L~~gG~l~~~~~~~~~--~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 140 DLIPQLDSHLNEDGQVIFSGIDYLQ--LPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp HHGGGSGGGEEEEEEEEEEEEEGGG--HHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEecCccc--HHHHHHHHHHcCCceEEee
Confidence 8889999999999999987655443 233445555 489887765
No 9
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.62 E-value=7.8e-15 Score=125.94 Aligned_cols=143 Identities=12% Similarity=0.010 Sum_probs=106.9
Q ss_pred HHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEe
Q 023543 104 VVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELT 182 (281)
Q Consensus 104 ~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~ 182 (281)
..+.+++... ..++++|||+|||+|..+..++..+.+|+++|+ +.+++.+++++..++.. .++.+...|
T Consensus 54 ~~l~~~~~~~------~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d 123 (235)
T 3lcc_A 54 PLIVHLVDTS------SLPLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKA----EYFSFVKED 123 (235)
T ss_dssp HHHHHHHHTT------CSCCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGG----GGEEEECCC
T ss_pred HHHHHHHHhc------CCCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCC----cceEEEECc
Confidence 4455666532 245569999999999999999998999999999 88999999998875433 468888877
Q ss_pred cCCCCCCCcCCCCCcEEEEccccCCCC--cHHHHHHHHHHhhCCCcEEEEEEeeeCh--------hHHHHHHHHHh-cCC
Q 023543 183 WGDDPDQDLIQPLPDYVLGSDVIYSEG--AVGDLLDTLLQLCGTQTTIFLAGELRND--------SVLEYFLEAAM-KDF 251 (281)
Q Consensus 183 w~~~~~~~~~~~~fD~Iia~d~iy~~~--~~~~ll~~l~~ll~~~g~~~l~~~~r~~--------~~~~~fl~~~~-~~f 251 (281)
+.+.. ...+||+|++..++++.. ....+++.+.++|+|||.+++....... -..+.+.+.+. .||
T Consensus 124 ~~~~~----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 199 (235)
T 3lcc_A 124 VFTWR----PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGF 199 (235)
T ss_dssp TTTCC----CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTE
T ss_pred hhcCC----CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCC
Confidence 65422 345899999999998866 8999999999999999998876542210 11234455555 489
Q ss_pred eEEEEecCC
Q 023543 252 VIGRVEQTQ 260 (281)
Q Consensus 252 ~v~~i~~~~ 260 (281)
.+..+....
T Consensus 200 ~~~~~~~~~ 208 (235)
T 3lcc_A 200 KAVSVEENP 208 (235)
T ss_dssp EEEEEEECT
T ss_pred eEEEEEecC
Confidence 988775543
No 10
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.61 E-value=1.7e-14 Score=119.24 Aligned_cols=131 Identities=8% Similarity=-0.026 Sum_probs=93.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|..++.+++.+.+|+++|+ +++++.+++|+..++.. ++.+...+..+. . ...+.+||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~-----~v~~~~~~~~~l-~-~~~~~~fD~v 93 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIE-----NTELILDGHENL-D-HYVREPIRAA 93 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCC-----CEEEEESCGGGG-G-GTCCSCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEeCcHHHH-H-hhccCCcCEE
Confidence 46889999999999999999999999999999 88999999999998764 677766332211 0 1235689999
Q ss_pred EEccccC---------CCCcHHHHHHHHHHhhCCCcEEEEEEeeeC------hhHHHHHHHHHh-cCCeEEEEec
Q 023543 200 LGSDVIY---------SEGAVGDLLDTLLQLCGTQTTIFLAGELRN------DSVLEYFLEAAM-KDFVIGRVEQ 258 (281)
Q Consensus 200 ia~d~iy---------~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~------~~~~~~fl~~~~-~~f~v~~i~~ 258 (281)
+++-..+ .......+++.+.++|+|||.+++...... ......|+..+. .+|.+.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 168 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQP 168 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehh
Confidence 8763221 124456788999999999999887654322 123445565554 3687777654
No 11
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.61 E-value=7.5e-15 Score=123.90 Aligned_cols=144 Identities=16% Similarity=0.108 Sum_probs=102.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||+|||+|..+..+++.+.+|+++|+ +.+++.+++++ + +.+...+..+.. ...+||+|
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---~--------~~~~~~d~~~~~----~~~~fD~v 106 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL---G--------RPVRTMLFHQLD----AIDAYDAV 106 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---T--------SCCEECCGGGCC----CCSCEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc---C--------CceEEeeeccCC----CCCcEEEE
Confidence 46789999999999999999999999999999 88999999887 1 122333332211 45789999
Q ss_pred EEccccCCCC--cHHHHHHHHHHhhCCCcEEEEEEeeeCh------------hHHHHHHHHHh-cC-CeEEEEecCCCCC
Q 023543 200 LGSDVIYSEG--AVGDLLDTLLQLCGTQTTIFLAGELRND------------SVLEYFLEAAM-KD-FVIGRVEQTQWHP 263 (281)
Q Consensus 200 ia~d~iy~~~--~~~~ll~~l~~ll~~~g~~~l~~~~r~~------------~~~~~fl~~~~-~~-f~v~~i~~~~~~~ 263 (281)
++..++++.. ....+++.+.++|+|||.++++...... -..+.+.+.+. .| |.+..+....-..
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~ 186 (211)
T 3e23_A 107 WAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKG 186 (211)
T ss_dssp EECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEEC
T ss_pred EecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCC
Confidence 9999998876 7889999999999999999988654321 02344555555 48 9988776544333
Q ss_pred CCCCCcEEEEEEEecC
Q 023543 264 DYCSPRVVVYILVKKL 279 (281)
Q Consensus 264 ~~~~~~~~i~~~~~k~ 279 (281)
........++.+.+++
T Consensus 187 ~~~~~~~wl~~~~~~~ 202 (211)
T 3e23_A 187 FDQELAQFLHVSVRKP 202 (211)
T ss_dssp TTSCEEEEEEEEEECC
T ss_pred CCCCCceEEEEEEecC
Confidence 3333344445554443
No 12
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.61 E-value=9.7e-15 Score=126.60 Aligned_cols=148 Identities=18% Similarity=0.204 Sum_probs=113.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++++|||||||+|..+..+++.+. +|+++|+ +.+++.+++++.. .++.+...+..+. .+.+.+||+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~---~~~~~~fD~ 111 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTS--------PVVCYEQKAIEDI---AIEPDAYNV 111 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCC--------TTEEEEECCGGGC---CCCTTCEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhcc--------CCeEEEEcchhhC---CCCCCCeEE
Confidence 4788999999999999999999888 8999999 8899999887651 3677777665432 234578999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC------------------------------------------
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN------------------------------------------ 236 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~------------------------------------------ 236 (281)
|+++.++++......+++.+.++|+|||.++++.....
T Consensus 112 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (253)
T 3g5l_A 112 VLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQK 191 (253)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEE
T ss_pred EEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCcc
Confidence 99999999999999999999999999999988732100
Q ss_pred -hhHHHHHHHHHh-cCCeEEEEecCCCC----------CCCCCCcEEEEEEEecC
Q 023543 237 -DSVLEYFLEAAM-KDFVIGRVEQTQWH----------PDYCSPRVVVYILVKKL 279 (281)
Q Consensus 237 -~~~~~~fl~~~~-~~f~v~~i~~~~~~----------~~~~~~~~~i~~~~~k~ 279 (281)
..+.+.+.+.+. .||.+..+.+.... ...+.+-+.++..++++
T Consensus 192 ~~~t~~~~~~~l~~aGF~~~~~~e~~~~~~~~~~~~~~~~~~~P~fl~~~~~~~~ 246 (253)
T 3g5l_A 192 YHRTVTTYIQTLLKNGFQINSVIEPEPAPELKDLPEMQDEYRRPMMLLISATKQE 246 (253)
T ss_dssp ECCCHHHHHHHHHHTTEEEEEEECCCCCGGGSSCGGGGGGGTSCCEEEEEEEECC
T ss_pred EecCHHHHHHHHHHcCCeeeeeecCCCchhhccChhHHHhhcCceEEEEEEeccc
Confidence 003345666666 49999988755433 34456777777777654
No 13
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.61 E-value=1.3e-14 Score=125.12 Aligned_cols=120 Identities=10% Similarity=0.029 Sum_probs=101.5
Q ss_pred cchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEE
Q 023543 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (281)
Q Consensus 100 W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~ 178 (281)
|+....+.+.+. ..++.+|||+|||+|..+..++..+.+|+++|+ +.+++.+++++..++.. ++.+
T Consensus 7 ~~~~~~~~~~~~--------~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~ 73 (239)
T 1xxl_A 7 HHSLGLMIKTAE--------CRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVE-----NVRF 73 (239)
T ss_dssp HHHHHHHHHHHT--------CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCC-----SEEE
T ss_pred CCCcchHHHHhC--------cCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCC-----CeEE
Confidence 777777777764 357889999999999999999998899999999 88999999999988764 6777
Q ss_pred EEEecCCCCCCCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 179 TELTWGDDPDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 179 ~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
...++.+ ..+.+.+||+|++..++++..+...+++.+.++|+|||.+++.....
T Consensus 74 ~~~d~~~---~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 74 QQGTAES---LPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp EECBTTB---CCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred Eeccccc---CCCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 7766543 22445789999999999998899999999999999999998876543
No 14
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.61 E-value=1.8e-14 Score=123.06 Aligned_cols=144 Identities=15% Similarity=0.195 Sum_probs=103.0
Q ss_pred cCCCeEEEECCC-cCHHHHHHHHc-CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSG-CGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcG-tG~~~i~~a~~-g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.++++|||+||| +|.+++.+++. +.+|+++|+ +.+++.+++|+..++. ++.+...|+.... .+.+.+||
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~--~~~~~~fD 125 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS------NVRLVKSNGGIIK--GVVEGTFD 125 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC------CCEEEECSSCSST--TTCCSCEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC------CcEEEeCCchhhh--hcccCcee
Confidence 468899999999 99999999987 889999999 8899999999999875 3667776643221 23347899
Q ss_pred EEEEccccCCCCc-------------------HHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEe
Q 023543 198 YVLGSDVIYSEGA-------------------VGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVE 257 (281)
Q Consensus 198 ~Iia~d~iy~~~~-------------------~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~ 257 (281)
+|++..+.+.... ...+++.+.++|+|||.+++....+. ...+.+.+.+. .+|.+..+.
T Consensus 126 ~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 126 VIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-KLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp EEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-hHHHHHHHHHHHcCCceEEEE
Confidence 9997655443221 47899999999999999988766543 33455666665 489888875
Q ss_pred cCCCCCCCCCCcEEEEEEEec
Q 023543 258 QTQWHPDYCSPRVVVYILVKK 278 (281)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~~~k 278 (281)
. ..+++ -..++.++|.
T Consensus 205 ~---~~g~~--~~~~l~f~~~ 220 (230)
T 3evz_A 205 F---KVGTR--WRHSLIFFKG 220 (230)
T ss_dssp E---CCCC---CEEEEEEECC
T ss_pred e---cCCCe--EEEEEEEecc
Confidence 3 22332 3445555554
No 15
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.61 E-value=9.5e-14 Score=117.73 Aligned_cols=170 Identities=12% Similarity=0.046 Sum_probs=115.2
Q ss_pred cchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcC--CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCce
Q 023543 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSA 176 (281)
Q Consensus 100 W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g--~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i 176 (281)
++-.....+++...+. ..++++|||+|||+|..+..++..+ .+|+++|+ +.+++.+++++..+++......++
T Consensus 11 ~~~~~~~~~~l~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v 86 (219)
T 3jwg_A 11 LNLNQQRLGTVVAVLK----SVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRI 86 (219)
T ss_dssp -CHHHHHHHHHHHHHH----HTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTE
T ss_pred CcchHHHHHHHHHHHh----hcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcce
Confidence 4455555666655432 2467899999999999999999876 58999999 889999999998776531001257
Q ss_pred EEEEEecCCCCCCCcCCCCCcEEEEccccCCCC--cHHHHHHHHHHhhCCCcEEEEEEeee-------------------
Q 023543 177 VVTELTWGDDPDQDLIQPLPDYVLGSDVIYSEG--AVGDLLDTLLQLCGTQTTIFLAGELR------------------- 235 (281)
Q Consensus 177 ~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~--~~~~ll~~l~~ll~~~g~~~l~~~~r------------------- 235 (281)
.+...++. .......+||+|++.+++++.. ....+++.+.++|+|||.++......
T Consensus 87 ~~~~~d~~---~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (219)
T 3jwg_A 87 SLFQSSLV---YRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHR 163 (219)
T ss_dssp EEEECCSS---SCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCT
T ss_pred EEEeCccc---ccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCce
Confidence 77776642 2223446899999999999876 44799999999999999665543221
Q ss_pred ---ChhHHHHHHHHHh--cCCeEEEEecCCCCCCCCCCcEEEEEEEe
Q 023543 236 ---NDSVLEYFLEAAM--KDFVIGRVEQTQWHPDYCSPRVVVYILVK 277 (281)
Q Consensus 236 ---~~~~~~~fl~~~~--~~f~v~~i~~~~~~~~~~~~~~~i~~~~~ 277 (281)
....+..|+..+. .||.++...--...+.+.. ...+-.++|
T Consensus 164 ~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~~~~~g~-~~qi~~~~~ 209 (219)
T 3jwg_A 164 FEWTRKEFQTWAVKVAEKYGYSVRFLQIGEIDDEFGS-PTQMGVFTL 209 (219)
T ss_dssp TSBCHHHHHHHHHHHHHHHTEEEEEEEESCCCTTSCC-SEEEEEEEE
T ss_pred eeecHHHHHHHHHHHHHHCCcEEEEEecCCccccCCC-CeEEEEEec
Confidence 2234455554443 3899888755444554433 333333333
No 16
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.60 E-value=2.1e-14 Score=121.55 Aligned_cols=129 Identities=11% Similarity=0.064 Sum_probs=102.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC---CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG---AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g---~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++.+|||+|||+|..+..+++.+ .+|+++|+ +.+++.+++++..++.. ++.+...++.+ ..+.+.+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~d~~~---~~~~~~~f 107 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-----NVEVLKSEENK---IPLPDNTV 107 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-----TEEEEECBTTB---CSSCSSCE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEeccccc---CCCCCCCe
Confidence 467899999999999999998865 68999999 88999999999988764 67777766543 22455789
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeCh----------hHHHHHHHHHh-cCCeEEEEe
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRND----------SVLEYFLEAAM-KDFVIGRVE 257 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~----------~~~~~fl~~~~-~~f~v~~i~ 257 (281)
|+|+++.++++..+...+++.+.++|+|||.+++....... -..+.+.+.+. .||.+..+.
T Consensus 108 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 108 DFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVV 179 (219)
T ss_dssp EEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEE
T ss_pred eEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEE
Confidence 99999999999989999999999999999999887643221 01234555555 489877664
No 17
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.60 E-value=5.7e-15 Score=128.06 Aligned_cols=106 Identities=16% Similarity=0.076 Sum_probs=91.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..+++. .++.+...++.+.. . +.+||+
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~----~~v~~~~~d~~~~~---~-~~~fD~ 106 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVS----ERVHFIHNDAAGYV---A-NEKCDV 106 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCCTTCC---C-SSCEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCC----cceEEEECChHhCC---c-CCCCCE
Confidence 46789999999999999988874 789999999 88999999999988765 47888887765422 2 578999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
|++..++++......+++.+.++|+|||.+++....
T Consensus 107 V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 107 AACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp EEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred EEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCc
Confidence 999999999888999999999999999999987654
No 18
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.59 E-value=1e-14 Score=127.36 Aligned_cols=130 Identities=15% Similarity=0.083 Sum_probs=98.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.++.+|||||||+|.+++.+|.. +.+|+++|+ +++++.+++|+..+++. ++.+...++.+.......+.+||
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-----~v~~~~~d~~~~~~~~~~~~~fD 153 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-----GARALWGRAEVLAREAGHREAYA 153 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-----SEEEEECCHHHHTTSTTTTTCEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-----ceEEEECcHHHhhcccccCCCce
Confidence 36789999999999999999975 568999999 88999999999999875 58888866543221111246899
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEecC
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVEQT 259 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~~~ 259 (281)
+|++..+ ..++.+++.+.++|+|||.+++.........+..+...+. .||.+..+...
T Consensus 154 ~I~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 154 RAVARAV----APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp EEEEESS----CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEE
T ss_pred EEEECCc----CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEe
Confidence 9998654 4578999999999999999876554344444455555554 38887777544
No 19
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.59 E-value=1.2e-14 Score=122.76 Aligned_cols=167 Identities=8% Similarity=-0.030 Sum_probs=107.5
Q ss_pred HHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcC-------CCCCC
Q 023543 103 GVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRH-------GDLRG 174 (281)
Q Consensus 103 s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~-------~~~~~ 174 (281)
...+.+|+... ...++.+|||+|||+|..+..+++.|.+|+++|+ +.|++.++++...+... .....
T Consensus 8 ~~~l~~~~~~l-----~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 82 (203)
T 1pjz_A 8 NKDLQQYWSSL-----NVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAP 82 (203)
T ss_dssp THHHHHHHHHH-----CCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECS
T ss_pred CHHHHHHHHhc-----ccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCC
Confidence 34566676542 1246789999999999999999999999999999 88999998775431000 00013
Q ss_pred ceEEEEEecCCCCCCCcCC-CCCcEEEEccccCCC--CcHHHHHHHHHHhhCCCcEEEEEE-eeeC-----h---hHHHH
Q 023543 175 SAVVTELTWGDDPDQDLIQ-PLPDYVLGSDVIYSE--GAVGDLLDTLLQLCGTQTTIFLAG-ELRN-----D---SVLEY 242 (281)
Q Consensus 175 ~i~~~~l~w~~~~~~~~~~-~~fD~Iia~d~iy~~--~~~~~ll~~l~~ll~~~g~~~l~~-~~r~-----~---~~~~~ 242 (281)
++.+...|..+ ....+ .+||+|++..++++. .....+++.+.++|+|||++++.. .... + -..+.
T Consensus 83 ~v~~~~~d~~~---l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~e 159 (203)
T 1pjz_A 83 GIEIWCGDFFA---LTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTW 159 (203)
T ss_dssp SSEEEEECCSS---STHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHH
T ss_pred ccEEEECcccc---CCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHH
Confidence 57777766432 22222 589999998887664 345679999999999999844433 2110 0 01233
Q ss_pred HHHHHhcCCeEEEEecCCCCC--------CCCCCcEEEEEEEe
Q 023543 243 FLEAAMKDFVIGRVEQTQWHP--------DYCSPRVVVYILVK 277 (281)
Q Consensus 243 fl~~~~~~f~v~~i~~~~~~~--------~~~~~~~~i~~~~~ 277 (281)
+.+.+..+|++..+....... .+....-.+|.++|
T Consensus 160 l~~~~~~gf~i~~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~ 202 (203)
T 1pjz_A 160 LHRVMSGNWEVTKVGGQDTLHSSARGLKAGLERMDEHVYVLER 202 (203)
T ss_dssp HHHTSCSSEEEEEEEESSCTTTCHHHHHHTCSSCCEEEEEEEE
T ss_pred HHHHhcCCcEEEEeccccchhcchhhhhcCcchhheeEEEEEe
Confidence 334444489888776554322 23444566777765
No 20
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.59 E-value=1.9e-14 Score=121.23 Aligned_cols=106 Identities=11% Similarity=0.177 Sum_probs=90.4
Q ss_pred CCCeEEEECCCcCHHHHHHHHc-CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~-g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
++++|||+|||+|..+..+++. +.+|+++|+ +.+++.+++|+..++.. .++.+...+..+ ..+.+.+||+|
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~---~~~~~~~~D~v 115 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLN----DRIQIVQGDVHN---IPIEDNYADLI 115 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECBTTB---CSSCTTCEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhcccc----CceEEEEcCHHH---CCCCcccccEE
Confidence 3349999999999999999886 668999999 88999999999998765 478888877543 22456789999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
++..++++......+++.+.++|+|||.++++...
T Consensus 116 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 116 VSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EECchHhhccCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 99999999999999999999999999999988543
No 21
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=1.3e-14 Score=127.22 Aligned_cols=162 Identities=15% Similarity=0.104 Sum_probs=112.5
Q ss_pred chHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcC--CEEEEEec-hhHHHHHHHHHHH---hhcCCCCCC
Q 023543 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIEN---NLRHGDLRG 174 (281)
Q Consensus 101 ~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g--~~V~~tD~-~~~l~~~~~N~~~---n~~~~~~~~ 174 (281)
..+++|+.|+. ..++.+|||||||+|.+++.++... .+|+++|+ +.+++.+++|+.. |++. +
T Consensus 23 ~D~~lL~~~~~--------~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~----~ 90 (260)
T 2ozv_A 23 MDAMLLASLVA--------DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFS----A 90 (260)
T ss_dssp CHHHHHHHTCC--------CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTG----G
T ss_pred cHHHHHHHHhc--------ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCc----c
Confidence 46778888764 2457799999999999999999864 58999999 8899999999998 7664 4
Q ss_pred ceEEEEEecCCCCC----CCcCCCCCcEEEEccccCCC------------------CcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 175 SAVVTELTWGDDPD----QDLIQPLPDYVLGSDVIYSE------------------GAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 175 ~i~~~~l~w~~~~~----~~~~~~~fD~Iia~d~iy~~------------------~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
++.+...|+.+... ..+...+||+|+++...+.. ..+..+++.+.++|+|+|.+++..
T Consensus 91 ~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 91 RIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp GEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 68888877654311 01335689999987554432 237889999999999999998875
Q ss_pred eeeChhHHHHHHHHHhcCCeEEEEecCCCCCCCCCCcEEEEEEEec
Q 023543 233 ELRNDSVLEYFLEAAMKDFVIGRVEQTQWHPDYCSPRVVVYILVKK 278 (281)
Q Consensus 233 ~~r~~~~~~~fl~~~~~~f~v~~i~~~~~~~~~~~~~~~i~~~~~k 278 (281)
... ....+++.+.+.|...++....-.+. +.....+....|.
T Consensus 171 ~~~---~~~~~~~~l~~~~~~~~i~~v~~~~~-~~~~~~lv~~~k~ 212 (260)
T 2ozv_A 171 RPQ---SVAEIIAACGSRFGGLEITLIHPRPG-EDAVRMLVTAIKG 212 (260)
T ss_dssp CGG---GHHHHHHHHTTTEEEEEEEEEESSTT-SCCCEEEEEEEET
T ss_pred cHH---HHHHHHHHHHhcCCceEEEEEcCCCC-CCceEEEEEEEeC
Confidence 533 23456777766676555543222222 3345555555553
No 22
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.58 E-value=1.8e-13 Score=114.92 Aligned_cols=120 Identities=16% Similarity=0.203 Sum_probs=93.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC--CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g--~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.++.+|||+|||+|..++.+++.+ .+|+++|+ +++++.+++|+..++.. ++.+...++.+... ..++||
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~---~~~~~D 110 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVAR-----NVTLVEAFAPEGLD---DLPDPD 110 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCT-----TEEEEECCTTTTCT---TSCCCS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-----cEEEEeCChhhhhh---cCCCCC
Confidence 467899999999999999999877 78999999 88999999999998764 67777766533222 226799
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeE
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVI 253 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v 253 (281)
+|++....+ ....+++.+.++|+|||.+++...... ..+.+.+.+. .+|.+
T Consensus 111 ~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~l~~~g~~~ 162 (204)
T 3e05_A 111 RVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTLD--TLTKAVEFLEDHGYMV 162 (204)
T ss_dssp EEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBHH--HHHHHHHHHHHTTCEE
T ss_pred EEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecccc--cHHHHHHHHHHCCCce
Confidence 999987764 788999999999999999988765432 2344555555 47643
No 23
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.58 E-value=1.6e-13 Score=116.02 Aligned_cols=124 Identities=19% Similarity=0.175 Sum_probs=95.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|.+++.+++.+.+|+++|+ +++++.+++|++.++.. .++.+...|..+.. ...++||+|
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~----~~v~~~~~d~~~~~---~~~~~~D~v 126 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLS----PRMRAVQGTAPAAL---ADLPLPEAV 126 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCTTGGG---TTSCCCSEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC----CCEEEEeCchhhhc---ccCCCCCEE
Confidence 46789999999999999999999889999999 88999999999998765 46777775543211 123579999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhc-CCeEEEEec
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMK-DFVIGRVEQ 258 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~-~f~v~~i~~ 258 (281)
++...+ ..+ +++.+.++|+|||.+++..... +....+.+.+.+ +|.+..+..
T Consensus 127 ~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~--~~~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 127 FIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTL--ESETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp EECSCC----CHH-HHHHHHHHSCTTCEEEEEECSH--HHHHHHHHHHHHHCSEEEEEEE
T ss_pred EECCcc----cHH-HHHHHHHhcCCCcEEEEEecCc--ccHHHHHHHHHhCCCcEEEEEe
Confidence 977643 455 9999999999999998876543 334445555553 788777743
No 24
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.58 E-value=5.2e-15 Score=136.33 Aligned_cols=103 Identities=15% Similarity=0.200 Sum_probs=87.0
Q ss_pred cccCCCeEEEECCCcCHHHHHHHHcCC-EEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 119 LLLHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 119 ~~~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
..++|++|||||||+|++++.+|+.|+ +|+++|.+.+++.|+++++.|++. +++.+..-+..+ .. ...+||
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~----~~i~~i~~~~~~---~~-lpe~~D 151 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLE----DRVHVLPGPVET---VE-LPEQVD 151 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCT----TTEEEEESCTTT---CC-CSSCEE
T ss_pred HhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCC----ceEEEEeeeeee---ec-CCcccc
Confidence 357999999999999999999999998 699999976899999999999987 678888755432 22 236899
Q ss_pred EEEE---ccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 023543 198 YVLG---SDVIYSEGAVGDLLDTLLQLCGTQTTIF 229 (281)
Q Consensus 198 ~Iia---~d~iy~~~~~~~ll~~l~~ll~~~g~~~ 229 (281)
+||+ ...+.++..++.++....++|+|+|.++
T Consensus 152 vivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 152 AIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp EEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred EEEeecccccccccchhhhHHHHHHhhCCCCceEC
Confidence 9998 5556778899999999999999999765
No 25
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.58 E-value=4.1e-14 Score=123.23 Aligned_cols=106 Identities=13% Similarity=0.093 Sum_probs=90.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|.++..++..+.+|+++|+ +.+++.+++++..++.. ++.+...|..+ ..+.+.+||+|
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-----~v~~~~~d~~~---l~~~~~~fD~V 107 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQ-----QVEYVQGDAEQ---MPFTDERFHIV 107 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEECCC-C---CCSCTTCEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCC-----ceEEEEecHHh---CCCCCCCEEEE
Confidence 46789999999999999999998889999999 88999999999887654 57777765433 23455789999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
+++.++++..+...+++.+.++|+|||.+++....
T Consensus 108 ~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 108 TCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 99999999999999999999999999999887543
No 26
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.58 E-value=8.3e-14 Score=124.19 Aligned_cols=106 Identities=13% Similarity=0.091 Sum_probs=90.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||||||+|..++.+++. |.+|+++|+ +.+++.+++++..+++. .++.+...|+.+. +.+||+
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~------~~~fD~ 140 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSP----RRKEVRIQGWEEF------DEPVDR 140 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCS----SCEEEEECCGGGC------CCCCSE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCC----CceEEEECCHHHc------CCCccE
Confidence 46789999999999999999886 899999999 88999999999988765 5788888776432 578999
Q ss_pred EEEccccCCC---------CcHHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 199 VLGSDVIYSE---------GAVGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 199 Iia~d~iy~~---------~~~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
|++..++++. .....+++.+.++|+|||.+++......
T Consensus 141 v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 141 IVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp EEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred EEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 9999999876 4568999999999999999998876543
No 27
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.58 E-value=9.1e-15 Score=121.58 Aligned_cols=130 Identities=18% Similarity=0.116 Sum_probs=94.7
Q ss_pred cchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceE
Q 023543 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAV 177 (281)
Q Consensus 100 W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~ 177 (281)
++++..+.+.+...+... ...++++|||+|||+|.+++.++..++ +|+++|+ +++++.+++|+..++.. ++.
T Consensus 23 rp~~~~~~~~l~~~l~~~-~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~ 96 (189)
T 3p9n_A 23 RPTTDRVRESLFNIVTAR-RDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLS-----GAT 96 (189)
T ss_dssp ---CHHHHHHHHHHHHHH-SCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCS-----CEE
T ss_pred ccCcHHHHHHHHHHHHhc-cCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCC-----ceE
Confidence 455555555554432210 125788999999999999997777765 7999999 88999999999999764 678
Q ss_pred EEEEecCCCCCCCcCCCCCcEEEEccccCCC-CcHHHHHHHHHH--hhCCCcEEEEEEeeeC
Q 023543 178 VTELTWGDDPDQDLIQPLPDYVLGSDVIYSE-GAVGDLLDTLLQ--LCGTQTTIFLAGELRN 236 (281)
Q Consensus 178 ~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~-~~~~~ll~~l~~--ll~~~g~~~l~~~~r~ 236 (281)
+...|+.+... .+.+.+||+|++..+.+.. .....+++.+.+ +|+|||.+++....+.
T Consensus 97 ~~~~d~~~~~~-~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 97 LRRGAVAAVVA-AGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp EEESCHHHHHH-HCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred EEEccHHHHHh-hccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 88766543211 1225789999987664443 678999999999 9999999998876554
No 28
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.58 E-value=3.8e-14 Score=127.12 Aligned_cols=107 Identities=10% Similarity=-0.009 Sum_probs=91.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..+++. .++.+...|..+ ..+.+.+||+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~---~~~~~~~fD~ 188 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRID----DHVRSRVCNMLD---TPFDKGAVTA 188 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTS---CCCCTTCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC----CceEEEECChhc---CCCCCCCEeE
Confidence 46789999999999999999886 899999999 88999999999998875 578888866543 2245678999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
|++.+++++.. ...+++.+.++|+|||.+++.....
T Consensus 189 V~~~~~l~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 189 SWNNESTMYVD-LHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp EEEESCGGGSC-HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEECCchhhCC-HHHHHHHHHHHcCCCcEEEEEEccc
Confidence 99999998884 9999999999999999998877543
No 29
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.58 E-value=1.5e-13 Score=116.42 Aligned_cols=142 Identities=13% Similarity=0.101 Sum_probs=101.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC--CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g--~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.++++|||+|||+|..+..+++.+ .+|+++|+ +.+++.+++|+..++.......++.+...+.. .......+||
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~---~~~~~~~~fD 104 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT---YQDKRFHGYD 104 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT---SCCGGGCSCS
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc---cccccCCCcC
Confidence 467899999999999999999876 58999999 88999999998876543100125777776542 2223346899
Q ss_pred EEEEccccCCCC--cHHHHHHHHHHhhCCCcEEEEEEeee----------------------ChhHHHHHHHHHh--cCC
Q 023543 198 YVLGSDVIYSEG--AVGDLLDTLLQLCGTQTTIFLAGELR----------------------NDSVLEYFLEAAM--KDF 251 (281)
Q Consensus 198 ~Iia~d~iy~~~--~~~~ll~~l~~ll~~~g~~~l~~~~r----------------------~~~~~~~fl~~~~--~~f 251 (281)
+|++..++++.. ....+++.+.++|+|||.++++.... ....+..|+..+. .||
T Consensus 105 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf 184 (217)
T 3jwh_A 105 AATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAY 184 (217)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSE
T ss_pred EEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCc
Confidence 999999999866 45899999999999999766654321 2333445554444 389
Q ss_pred eEEEEecCCCCCCC
Q 023543 252 VIGRVEQTQWHPDY 265 (281)
Q Consensus 252 ~v~~i~~~~~~~~~ 265 (281)
.+....--...+..
T Consensus 185 ~v~~~~~g~~~~~~ 198 (217)
T 3jwh_A 185 NVQFQPIGEADPEV 198 (217)
T ss_dssp EEEECCCSCCCSSS
T ss_pred eEEEEecCCccCCC
Confidence 88777544444443
No 30
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.58 E-value=2e-14 Score=124.25 Aligned_cols=128 Identities=14% Similarity=0.086 Sum_probs=96.6
Q ss_pred CCCeEEEECCCcCHHHHHHHH--cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 122 HGKKIVELGSGCGLVGCIAAL--LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~--~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
++++|||+|||+|.+++.++. .+.+|+++|+ +++++.+++|+..++.. ++.+...+..+.........+||+
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-----NTTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-----SEEEEESCHHHHTTCTTTTTCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CEEEEeccHHHhcccccccCCccE
Confidence 678999999999999999885 5679999999 88999999999998765 577777655331110011468999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEec
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVEQ 258 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~~ 258 (281)
|++..+ .....+++.+.++|+|||.+++..........+.+.+.+. .+|.+..+..
T Consensus 145 V~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 145 VTARAV----ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp EEEECC----SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEecc----CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEE
Confidence 998763 5689999999999999999988755445554555666555 3888776643
No 31
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.57 E-value=7.1e-14 Score=124.02 Aligned_cols=108 Identities=9% Similarity=0.085 Sum_probs=92.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..+..+++. +.+|+++|+ +.+++.+++++..++.. .++.+...++.+ ..+.+.+||+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~---~~~~~~~fD~ 153 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLA----DNITVKYGSFLE---IPCEDNSYDF 153 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCT----TTEEEEECCTTS---CSSCTTCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCC----cceEEEEcCccc---CCCCCCCEeE
Confidence 46789999999999999988875 889999999 88999999999888765 468888866543 2345678999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
|++.+++++......+++.+.++|+|||.+++.....
T Consensus 154 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 154 IWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 9999999998889999999999999999999887543
No 32
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.57 E-value=4.9e-14 Score=116.37 Aligned_cols=126 Identities=19% Similarity=0.197 Sum_probs=95.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|..+..++..+.+|+++|+ +.+++.+++|.. ++.+...+..+ ..+...+||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~----------~~~~~~~d~~~---~~~~~~~~D~i 111 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFP----------EARWVVGDLSV---DQISETDFDLI 111 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTT---SCCCCCCEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCC----------CCcEEEccccc---CCCCCCceeEE
Confidence 36789999999999999999999999999999 888999987752 34556655433 22345689999
Q ss_pred EEc-cccCCC--CcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEecC
Q 023543 200 LGS-DVIYSE--GAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVEQT 259 (281)
Q Consensus 200 ia~-d~iy~~--~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~~~ 259 (281)
++. +++++. .....+++.+.++|+|+|.+++..........+.+...+. .||.+..+...
T Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 112 VSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp EECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESS
T ss_pred EECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecc
Confidence 998 676654 5568999999999999999998876554223344555555 49998888554
No 33
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.57 E-value=6.5e-14 Score=121.42 Aligned_cols=106 Identities=15% Similarity=0.121 Sum_probs=90.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..++.+++.+. +|+++|+ +.+++.+++|+..++.. .++.+...++.+ ..+.+.+||+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~---~~~~~~~fD~ 117 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCA----DRVKGITGSMDN---LPFQNEELDL 117 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTS---CSSCTTCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCC----CceEEEECChhh---CCCCCCCEEE
Confidence 4678999999999999999998765 9999999 88999999999998876 468888877643 2244578999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
|++..++++. ....+++.+.++|+|||.+++....
T Consensus 118 v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 118 IWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp EEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred EEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 9999999988 6899999999999999999988753
No 34
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.57 E-value=3.3e-14 Score=124.38 Aligned_cols=106 Identities=13% Similarity=0.067 Sum_probs=91.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..++.+++.+. +|+++|+ +.+++.+++++..+++. +++.+...|+.+. .+.+.+||+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~---~~~~~~fD~ 117 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQ----NRVTGIVGSMDDL---PFRNEELDL 117 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTSC---CCCTTCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCC----cCcEEEEcChhhC---CCCCCCEEE
Confidence 4688999999999999999998754 8999999 88999999999998775 5788888776432 234578999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
|++..++++. ....+++.+.++|+|||.+++....
T Consensus 118 i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 118 IWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp EEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred EEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 9999999888 7899999999999999999888754
No 35
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.57 E-value=1.5e-14 Score=127.14 Aligned_cols=107 Identities=16% Similarity=0.134 Sum_probs=87.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc----CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL----GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~----g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~ 195 (281)
.+|.+|||||||+|..++.+++. |++|+++|+ +.|++.|++++...+.. .++.+...|..+ ++.++
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~----~~v~~~~~D~~~-----~~~~~ 139 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP----TPVDVIEGDIRD-----IAIEN 139 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS----SCEEEEESCTTT-----CCCCS
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC----ceEEEeeccccc-----ccccc
Confidence 57889999999999999988874 568999999 88999999999887654 468887755432 23367
Q ss_pred CcEEEEccccCCCC--cHHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 196 PDYVLGSDVIYSEG--AVGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 196 fD~Iia~d~iy~~~--~~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
||+|++..++++.. ....+++.+.+.|+|||.++++...+.
T Consensus 140 ~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 140 ASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred cccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 99999999988743 456799999999999999999876543
No 36
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.56 E-value=1.9e-13 Score=120.74 Aligned_cols=121 Identities=12% Similarity=0.104 Sum_probs=95.4
Q ss_pred hHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHH-HcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEE
Q 023543 102 SGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAA-LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVT 179 (281)
Q Consensus 102 ~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a-~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~ 179 (281)
+...+.+.+...+. ..++.+|||+|||+|..++.++ ..|.+|+++|+ +.+++.+++++...+.. .++.+.
T Consensus 48 a~~~~~~~~~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~----~~~~~~ 119 (287)
T 1kpg_A 48 AQIAKIDLALGKLG----LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENL----RSKRVL 119 (287)
T ss_dssp HHHHHHHHHHTTTT----CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCC----SCEEEE
T ss_pred HHHHHHHHHHHHcC----CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCC----CCeEEE
Confidence 33344455544321 3467899999999999999888 57889999999 88999999999877654 467777
Q ss_pred EEecCCCCCCCcCCCCCcEEEEccccCCC--CcHHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 180 ELTWGDDPDQDLIQPLPDYVLGSDVIYSE--GAVGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 180 ~l~w~~~~~~~~~~~~fD~Iia~d~iy~~--~~~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
..++.+ ++ .+||+|++..++++. .....+++.+.++|+|||.+++......
T Consensus 120 ~~d~~~-----~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 120 LAGWEQ-----FD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp ESCGGG-----CC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred ECChhh-----CC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 766532 22 789999999999886 7899999999999999999998876543
No 37
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.56 E-value=3.5e-14 Score=123.31 Aligned_cols=122 Identities=14% Similarity=0.171 Sum_probs=97.3
Q ss_pred cchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc-CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceE
Q 023543 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAV 177 (281)
Q Consensus 100 W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~-g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~ 177 (281)
++.+..+.+.+...+. ..++.+|||+|||+|..+..+++. +.+|+++|+ +.+++.+++++..+ .++.
T Consensus 37 ~~~~~~~~~~~~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~ 105 (266)
T 3ujc_A 37 SSGGLEATKKILSDIE----LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-------NKII 105 (266)
T ss_dssp STTHHHHHHHHTTTCC----CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-------TTEE
T ss_pred ccchHHHHHHHHHhcC----CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-------CCeE
Confidence 5556666666655422 346789999999999999999886 889999999 88899998876554 3677
Q ss_pred EEEEecCCCCCCCcCCCCCcEEEEccccCCC--CcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 178 VTELTWGDDPDQDLIQPLPDYVLGSDVIYSE--GAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 178 ~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~--~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
+...|+.+. .+.+.+||+|++..++++. .....+++.+.++|+|||.+++.....
T Consensus 106 ~~~~d~~~~---~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 106 FEANDILTK---EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp EEECCTTTC---CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEECccccC---CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 777665432 3456789999999999998 899999999999999999999887543
No 38
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.56 E-value=5.3e-14 Score=120.65 Aligned_cols=101 Identities=8% Similarity=-0.033 Sum_probs=83.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||+|||+|..+..+++.+.+|+++|+ +.+++.+++++..++. ++.+...+..+. .+. .+||+|
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~---~~~-~~fD~v 105 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL------KPRLACQDISNL---NIN-RKFDLI 105 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC------CCEEECCCGGGC---CCS-CCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCC------CeEEEecccccC---Ccc-CCceEE
Confidence 36789999999999999999999999999999 8899999999887653 355665554322 122 689999
Q ss_pred EEcc-ccCCC---CcHHHHHHHHHHhhCCCcEEEEE
Q 023543 200 LGSD-VIYSE---GAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 200 ia~d-~iy~~---~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
++.. ++++. .....+++.+.++|+|||.+++.
T Consensus 106 ~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 106 TCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp EECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred EEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9997 88876 67889999999999999998874
No 39
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.56 E-value=1.5e-13 Score=112.36 Aligned_cols=135 Identities=11% Similarity=0.065 Sum_probs=102.6
Q ss_pred hHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEE
Q 023543 102 SGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTE 180 (281)
Q Consensus 102 ~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~ 180 (281)
....+.+++...+. ..++.+|||+|||+|..++.+++.+.+|+++|+ +.+++.+++|+..++.. ++.+..
T Consensus 19 ~~~~~~~~~~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~~~~~ 89 (183)
T 2yxd_A 19 TKEEIRAVSIGKLN----LNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIK-----NCQIIK 89 (183)
T ss_dssp CCHHHHHHHHHHHC----CCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCC-----SEEEEE
T ss_pred CHHHHHHHHHHHcC----CCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCC-----cEEEEE
Confidence 34455555554432 346789999999999999999997789999999 88999999999998764 677777
Q ss_pred EecCCCCCCCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEe
Q 023543 181 LTWGDDPDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVE 257 (281)
Q Consensus 181 l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~ 257 (281)
.++.+ .+.+.+||+|++..+ .....+++.+.++ |+|.+++..... .....+.+.+. .+|.++.+.
T Consensus 90 ~d~~~----~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~--~~~~~~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 90 GRAED----VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVL--ENAAKIINEFESRGYNVDAVN 155 (183)
T ss_dssp SCHHH----HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCH--HHHHHHHHHHHHTTCEEEEEE
T ss_pred CCccc----cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEeccc--ccHHHHHHHHHHcCCeEEEEE
Confidence 66543 233468999999888 6788999999998 999988876433 33455666665 378877763
No 40
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.56 E-value=3.7e-14 Score=117.90 Aligned_cols=104 Identities=13% Similarity=0.094 Sum_probs=88.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||+|||+|..+..++..+.+|+++|+ +.+++.+++++..++.. ++.+...++.+. .+ +.+||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~d~~~~---~~-~~~~D~v 101 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLD-----NLHTRVVDLNNL---TF-DRQYDFI 101 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCT-----TEEEEECCGGGC---CC-CCCEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCC-----CcEEEEcchhhC---CC-CCCceEE
Confidence 46789999999999999999998999999999 88999999999888764 577777665432 22 5789999
Q ss_pred EEccccCCCC--cHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 200 LGSDVIYSEG--AVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 200 ia~d~iy~~~--~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
++..++++.. ....+++.+.++|+|||.+++...
T Consensus 102 ~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 102 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 9999998755 889999999999999999777653
No 41
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.55 E-value=2.5e-14 Score=126.39 Aligned_cols=108 Identities=19% Similarity=0.130 Sum_probs=92.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||||||+|..+..++..|.+|+++|+ +.+++.+++++..++.. .++.+...++.+.. .+.+.+||+|
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~--~~~~~~fD~v 140 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVS----DNMQFIHCAAQDVA--SHLETPVDLI 140 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCG----GGEEEEESCGGGTG--GGCSSCEEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC----cceEEEEcCHHHhh--hhcCCCceEE
Confidence 35789999999999999999999999999999 88999999999988764 47888887764332 1345789999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
++..++++..+...+++.+.++|+|||.+++....
T Consensus 141 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 141 LFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp EEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred EECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 99999999899999999999999999999988753
No 42
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.55 E-value=1.2e-13 Score=116.85 Aligned_cols=101 Identities=15% Similarity=0.108 Sum_probs=82.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||+|||+|..+..++..+.+|+++|+ +.+++.+++++. .++.+...+..+ .... .+||+|
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~d~~~---~~~~-~~fD~v 110 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP---------KEFSITEGDFLS---FEVP-TSIDTI 110 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC---------TTCCEESCCSSS---CCCC-SCCSEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC---------CceEEEeCChhh---cCCC-CCeEEE
Confidence 36789999999999999999999999999999 889999988765 134455544432 2223 789999
Q ss_pred EEccccCCCCcHHH--HHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGAVGD--LLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~~~~--ll~~l~~ll~~~g~~~l~~~~ 234 (281)
++..++++...... +++.+.++|+|||.+++....
T Consensus 111 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 111 VSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred EECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 99999999877766 999999999999999998654
No 43
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.55 E-value=3.5e-14 Score=115.59 Aligned_cols=121 Identities=11% Similarity=0.143 Sum_probs=94.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||+|||+|..+..+++.+.+|+++|+ +.+++.++++ . .++.+...+ ..+.+.+||+|
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~-----~~v~~~~~d------~~~~~~~~D~v 79 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK-----F-----DSVITLSDP------KEIPDNSVDFI 79 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH-----C-----TTSEEESSG------GGSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh-----C-----CCcEEEeCC------CCCCCCceEEE
Confidence 46779999999999999999987779999999 8889999888 1 245555533 23445789999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChh----------HHHHHHHHHhcCCeEEEEec
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDS----------VLEYFLEAAMKDFVIGRVEQ 258 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~----------~~~~fl~~~~~~f~v~~i~~ 258 (281)
+++.++++......+++.+.++|+|||.+++....+... ..+.+.+.+. ||.+..+..
T Consensus 80 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-Gf~~~~~~~ 147 (170)
T 3i9f_A 80 LFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS-NFVVEKRFN 147 (170)
T ss_dssp EEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-TEEEEEEEC
T ss_pred EEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-CcEEEEccC
Confidence 999999999999999999999999999999886543310 1234555556 998877754
No 44
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.54 E-value=2e-13 Score=119.38 Aligned_cols=168 Identities=13% Similarity=-0.000 Sum_probs=106.7
Q ss_pred HHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHH----------hhcCC--
Q 023543 104 VVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIEN----------NLRHG-- 170 (281)
Q Consensus 104 ~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~----------n~~~~-- 170 (281)
..+.+|+..... ..++.+|||+|||+|..+..+|..|.+|+++|+ +.|++.++++... ++...
T Consensus 54 ~~l~~~~~~~~~----~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~ 129 (252)
T 2gb4_A 54 QLLKKHLDTFLK----GQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFK 129 (252)
T ss_dssp HHHHHHHHHHHT----TCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEE
T ss_pred HHHHHHHHHhcc----CCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccc
Confidence 356666654211 136789999999999999999999999999999 8899998765431 00000
Q ss_pred CCCCceEEEEEecCCCCCCCcCC-CCCcEEEEccccCC--CCcHHHHHHHHHHhhCCCcEEEEEE-eeeC-----h---h
Q 023543 171 DLRGSAVVTELTWGDDPDQDLIQ-PLPDYVLGSDVIYS--EGAVGDLLDTLLQLCGTQTTIFLAG-ELRN-----D---S 238 (281)
Q Consensus 171 ~~~~~i~~~~l~w~~~~~~~~~~-~~fD~Iia~d~iy~--~~~~~~ll~~l~~ll~~~g~~~l~~-~~r~-----~---~ 238 (281)
....++.+...|.. +....+ .+||+|++..++++ ......+++.+.++|+|||++++.. .... + -
T Consensus 130 ~~~~~i~~~~~D~~---~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~ 206 (252)
T 2gb4_A 130 SSSGSISLYCCSIF---DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYV 206 (252)
T ss_dssp ETTSSEEEEESCTT---TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCC
T ss_pred cCCCceEEEECccc---cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCC
Confidence 00135777775543 222222 68999998877765 3457789999999999999986443 2110 0 0
Q ss_pred HHHHHHHHHhcCCeEEEEecCCC-C-----CCCCCCcEEEEEEEec
Q 023543 239 VLEYFLEAAMKDFVIGRVEQTQW-H-----PDYCSPRVVVYILVKK 278 (281)
Q Consensus 239 ~~~~fl~~~~~~f~v~~i~~~~~-~-----~~~~~~~~~i~~~~~k 278 (281)
..+...+.+..+|++..+..... . .....-.-.+|.++|+
T Consensus 207 ~~~el~~~l~~~f~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 252 (252)
T 2gb4_A 207 PSAELKRLFGTKCSMQCLEEVDALEERHKAWGLDYLFEKLYLLTEK 252 (252)
T ss_dssp CHHHHHHHHTTTEEEEEEEEEECCCGGGTTTTCSCCEEEEEEEEEC
T ss_pred CHHHHHHHhhCCeEEEEEeccccchhhhhhcCcchhhheeEEEecC
Confidence 12334444555688877743321 1 1223334568888774
No 45
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.54 E-value=1.1e-13 Score=121.09 Aligned_cols=124 Identities=13% Similarity=0.070 Sum_probs=99.8
Q ss_pred cchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceE
Q 023543 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAV 177 (281)
Q Consensus 100 W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~ 177 (281)
.++...+.+.+...+. ..++.+|||+|||+|..+..+++ .+.+|+++|+ +.+++.+++++..++.. .++.
T Consensus 43 ~~~~~~~~~~l~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~~~ 114 (273)
T 3bus_A 43 DDATDRLTDEMIALLD----VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLA----NRVT 114 (273)
T ss_dssp HHHHHHHHHHHHHHSC----CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCT----TTEE
T ss_pred HHHHHHHHHHHHHhcC----CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCC----cceE
Confidence 3445555566655422 34678999999999999998887 5789999999 88999999999988765 4688
Q ss_pred EEEEecCCCCCCCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 178 VTELTWGDDPDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 178 ~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
+...++.+ ..+.+.+||+|++.+++++......+++.+.++|+|||.+++....
T Consensus 115 ~~~~d~~~---~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 115 FSYADAMD---LPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp EEECCTTS---CCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred EEECcccc---CCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 88866543 2244578999999999999988999999999999999999888754
No 46
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.54 E-value=4e-13 Score=112.34 Aligned_cols=127 Identities=17% Similarity=0.119 Sum_probs=95.1
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVL 200 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Ii 200 (281)
++ +|||+|||+|..+..+++.|.+|+++|+ +.+++.+++++..++. ++.+...+..+ ..+.+.+||+|+
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~---~~~~~~~fD~v~ 99 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGV------KITTVQSNLAD---FDIVADAWEGIV 99 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTC------CEEEECCBTTT---BSCCTTTCSEEE
T ss_pred CC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCC------ceEEEEcChhh---cCCCcCCccEEE
Confidence 45 9999999999999999999999999999 8899999999988754 36666655432 223456899999
Q ss_pred EccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeCh--------------hHHHHHHHHHhcCCeEEEEecC
Q 023543 201 GSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRND--------------SVLEYFLEAAMKDFVIGRVEQT 259 (281)
Q Consensus 201 a~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~--------------~~~~~fl~~~~~~f~v~~i~~~ 259 (281)
++...+.......+++.+.++|+|||.+++....... -..+.+.+.+. ||++..+...
T Consensus 100 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-Gf~v~~~~~~ 171 (202)
T 2kw5_A 100 SIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP-SLNWLIANNL 171 (202)
T ss_dssp EECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS-SSCEEEEEEE
T ss_pred EEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc-CceEEEEEEE
Confidence 9755444567889999999999999999888643211 01233444445 9988777443
No 47
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.53 E-value=4e-13 Score=113.81 Aligned_cols=129 Identities=16% Similarity=0.018 Sum_probs=95.4
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
++.+|||||||+|.+++.+++. +.+|+++|+ +.+++.+++|+..++.. ++.+...++.+ ....+.+.+||+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~-----~v~~~~~d~~~-~~~~~~~~~~D~ 114 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVP-----NIKLLWVDGSD-LTDYFEDGEIDR 114 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCS-----SEEEEECCSSC-GGGTSCTTCCSE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCC-----CEEEEeCCHHH-HHhhcCCCCCCE
Confidence 4779999999999999999886 568999999 88999999999998764 68888876643 111134568999
Q ss_pred EEEccccCCCC--------cHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEec
Q 023543 199 VLGSDVIYSEG--------AVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVEQ 258 (281)
Q Consensus 199 Iia~d~iy~~~--------~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~~ 258 (281)
|++.....+.. ....+++.+.++|+|||.+++.... ....+...+.+. .+|.+..+..
T Consensus 115 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 115 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN--RGLFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC--HHHHHHHHHHHHHHTCEEEEEES
T ss_pred EEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC--HHHHHHHHHHHHHCCCeeeeccc
Confidence 99875432221 2468999999999999999887542 222333444444 4898877754
No 48
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.53 E-value=1.6e-13 Score=118.21 Aligned_cols=130 Identities=13% Similarity=0.013 Sum_probs=97.6
Q ss_pred CCCeEEEECCCcCHHHHHHHHcC-CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g-~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
++.+|||+|||+|..+..++..+ .+|+++|+ +.+++.+++++..++. .++.+...++.+. ...+.+||+|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~~---~~~~~~fD~v 150 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK-----RVRNYFCCGLQDF---TPEPDSYDVI 150 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG-----GEEEEEECCGGGC---CCCSSCEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC-----ceEEEEEcChhhc---CCCCCCEEEE
Confidence 57899999999999999888764 48999999 8899999999877642 2566777665432 2234579999
Q ss_pred EEccccCCCCc--HHHHHHHHHHhhCCCcEEEEEEeeeCh------------hHHHHHHHHHh-cCCeEEEEecC
Q 023543 200 LGSDVIYSEGA--VGDLLDTLLQLCGTQTTIFLAGELRND------------SVLEYFLEAAM-KDFVIGRVEQT 259 (281)
Q Consensus 200 ia~d~iy~~~~--~~~ll~~l~~ll~~~g~~~l~~~~r~~------------~~~~~fl~~~~-~~f~v~~i~~~ 259 (281)
++..++++... ...+++.+.++|+|||.+++....... ...+.+.+.+. .||.+..+...
T Consensus 151 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 151 WIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 99999988665 569999999999999999987643210 01234555555 48998877654
No 49
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=1e-13 Score=116.10 Aligned_cols=124 Identities=17% Similarity=0.046 Sum_probs=96.2
Q ss_pred CCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEEE
Q 023543 123 GKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLG 201 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia 201 (281)
+.+|||+|||+|..+..++..|.+|+++|+ +.+++.++++. .++.+...++.+ ..+.+.+||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~---~~~~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH----------PSVTFHHGTITD---LSDSPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC----------TTSEEECCCGGG---GGGSCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC----------CCCeEEeCcccc---cccCCCCeEEEEe
Confidence 789999999999999999999999999999 88999988771 245666655432 2344678999999
Q ss_pred ccccCCCC--cHHHHHHHHHHhhCCCcEEEEEEeeeCh-------------hHHHHHHHHHh-cCCeEEEEecC
Q 023543 202 SDVIYSEG--AVGDLLDTLLQLCGTQTTIFLAGELRND-------------SVLEYFLEAAM-KDFVIGRVEQT 259 (281)
Q Consensus 202 ~d~iy~~~--~~~~ll~~l~~ll~~~g~~~l~~~~r~~-------------~~~~~fl~~~~-~~f~v~~i~~~ 259 (281)
..++++.. ....+++.+.++|+|||.+++....... -..+.+.+.+. .||.+..+...
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 182 (203)
T 3h2b_A 109 WYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWD 182 (203)
T ss_dssp ESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEEC
T ss_pred hhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEec
Confidence 99998864 8999999999999999999988744321 11234455555 49998888653
No 50
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.53 E-value=4.3e-14 Score=121.27 Aligned_cols=102 Identities=12% Similarity=0.081 Sum_probs=85.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|..+..++..+.+|+++|+ +.+++.++++... ++.+...+..+. ..+.+||+|
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~---------~v~~~~~d~~~~----~~~~~fD~v 107 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD---------GITYIHSRFEDA----QLPRRYDNI 107 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS---------CEEEEESCGGGC----CCSSCEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC---------CeEEEEccHHHc----CcCCcccEE
Confidence 46789999999999999999998999999999 8899999877432 366666554332 245789999
Q ss_pred EEccccCCCCcHHHHHHHHH-HhhCCCcEEEEEEeee
Q 023543 200 LGSDVIYSEGAVGDLLDTLL-QLCGTQTTIFLAGELR 235 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~-~ll~~~g~~~l~~~~r 235 (281)
++..++++..+...+++.+. ++|+|||.+++.....
T Consensus 108 ~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 108 VLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp EEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred EEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 99999999888999999999 9999999999887543
No 51
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.52 E-value=4.7e-14 Score=124.92 Aligned_cols=125 Identities=17% Similarity=0.226 Sum_probs=94.4
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++++|||+|||+|.+++.+++.|+ +|+++|+ +.+++.+++|+..|+.. +++.+...|..+.. .+.+||+
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~----~~v~~~~~D~~~~~----~~~~fD~ 195 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE----DRMSAYNMDNRDFP----GENIADR 195 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT----TTEEEECSCTTTCC----CCSCEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEECCHHHhc----ccCCccE
Confidence 3588999999999999999999887 5999999 88999999999999876 45777775544322 2578999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC----hhHHHHHHHHHh-cCCeEEEEe
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN----DSVLEYFLEAAM-KDFVIGRVE 257 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~----~~~~~~fl~~~~-~~f~v~~i~ 257 (281)
|++... .....+++.+.++|+|||.+++...... ....+.+.+.+. .||.+..+.
T Consensus 196 Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~ 255 (278)
T 2frn_A 196 ILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLN 255 (278)
T ss_dssp EEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred EEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEEee
Confidence 988433 2336788889999999999888765532 233444555555 488887743
No 52
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.52 E-value=9e-14 Score=119.25 Aligned_cols=101 Identities=22% Similarity=0.164 Sum_probs=84.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++++|||+|||+|..+..+++.+. +|+++|+ +.+++.++++...+ ++.+...+..+. .+.+.+||+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~d~~~~---~~~~~~fD~ 110 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDT--------GITYERADLDKL---HLPQDSFDL 110 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSS--------SEEEEECCGGGC---CCCTTCEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccC--------CceEEEcChhhc---cCCCCCceE
Confidence 4678999999999999999999888 9999999 88999988775432 466666555332 234578999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
|++..++++......+++.+.++|+|||.++++.
T Consensus 111 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 111 AYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 9999999998899999999999999999998875
No 53
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.52 E-value=1.1e-13 Score=118.78 Aligned_cols=102 Identities=9% Similarity=0.017 Sum_probs=86.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|..+..++..|.+|+++|+ +.+++.++++.. ..++.+...+..+ ..+.+.+||+|
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~---~~~~~~~fD~v 120 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGE--------GPDLSFIKGDLSS---LPFENEQFEAI 120 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTC--------BTTEEEEECBTTB---CSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcc--------cCCceEEEcchhc---CCCCCCCccEE
Confidence 46789999999999999999999999999999 888998887741 1367777766543 22446789999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
++..++++......+++.+.++|+|||.++++..
T Consensus 121 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 121 MAINSLEWTEEPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp EEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEc
Confidence 9999999999999999999999999999988864
No 54
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.51 E-value=4.9e-13 Score=109.22 Aligned_cols=123 Identities=7% Similarity=-0.007 Sum_probs=90.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCC--CC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQ--PL 195 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~--~~ 195 (281)
.++.+|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. .++ +...+..+ .+.. ++
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~-~~~~d~~~----~~~~~~~~ 94 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVS----DRI-AVQQGAPR----AFDDVPDN 94 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCT----TSE-EEECCTTG----GGGGCCSC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCC----CCE-EEecchHh----hhhccCCC
Confidence 46789999999999999998886 668999999 88999999999988764 356 55533221 2233 78
Q ss_pred CcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEec
Q 023543 196 PDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVEQ 258 (281)
Q Consensus 196 fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~~ 258 (281)
||+|++..++++ ..+++.+.++|+|||.+++....... ...+...+. .++.+..+..
T Consensus 95 ~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 152 (178)
T 3hm2_A 95 PDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTVES--EQMLWALRKQFGGTISSFAI 152 (178)
T ss_dssp CSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSHHH--HHHHHHHHHHHCCEEEEEEE
T ss_pred CCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecccc--HHHHHHHHHHcCCeeEEEEe
Confidence 999999988876 77899999999999999887654432 223344443 3676666533
No 55
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.51 E-value=1.5e-13 Score=120.65 Aligned_cols=103 Identities=17% Similarity=0.140 Sum_probs=81.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC--CCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD--QDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~--~~~~~~~fD 197 (281)
.++.+|||||||+|.+++.+++.|++|+++|+ +.|++.+++|+..+. ...+|.+... ....+.+||
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~-----------v~~~~~~~~~~~~~~~~~~fD 112 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRC-----------VTIDLLDITAEIPKELAGHFD 112 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSC-----------CEEEECCTTSCCCGGGTTCCS
T ss_pred CCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcc-----------ceeeeeecccccccccCCCcc
Confidence 56889999999999999999999999999999 889999999876541 2334433221 111246899
Q ss_pred EEEEccccCC--CCcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 198 YVLGSDVIYS--EGAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 198 ~Iia~d~iy~--~~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
+|+++.++++ ......+++.+.++| |||.+++++...
T Consensus 113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 9999998875 356778999999999 999999998753
No 56
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.51 E-value=9e-14 Score=117.64 Aligned_cols=129 Identities=12% Similarity=0.102 Sum_probs=95.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-CCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-QDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..+..++..+.+|+++|+ +.+++.++++ . ++.+...+..+... ....+.+||+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~--------~~~~~~~~~~~~~~~~~~~~~~fD~ 119 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA---G--------AGEVHLASYAQLAEAKVPVGKDYDL 119 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT---C--------SSCEEECCHHHHHTTCSCCCCCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh---c--------ccccchhhHHhhcccccccCCCccE
Confidence 46789999999999999999999999999999 8889999877 1 23344444332211 1123456999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC-----------------------------hhHHHHHHHHHh-
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN-----------------------------DSVLEYFLEAAM- 248 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~-----------------------------~~~~~~fl~~~~- 248 (281)
|+++.+++ ......+++.+.++|+|||.+++...... ....+.+.+.+.
T Consensus 120 v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (227)
T 3e8s_A 120 ICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDM 198 (227)
T ss_dssp EEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHH
T ss_pred EEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHH
Confidence 99999999 78889999999999999999998764210 002355666666
Q ss_pred cCCeEEEEecCCC
Q 023543 249 KDFVIGRVEQTQW 261 (281)
Q Consensus 249 ~~f~v~~i~~~~~ 261 (281)
.||.+..+....+
T Consensus 199 aGf~~~~~~~~~~ 211 (227)
T 3e8s_A 199 AGLRLVSLQEPQH 211 (227)
T ss_dssp TTEEEEEEECCCC
T ss_pred cCCeEEEEecCCC
Confidence 4999999876443
No 57
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.51 E-value=5.5e-14 Score=122.16 Aligned_cols=138 Identities=18% Similarity=0.185 Sum_probs=97.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCC-------------C-----------CC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGD-------------L-----------RG 174 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~-------------~-----------~~ 174 (281)
.++++|||||||+|..++.++..+. +|+++|+ +.+++.+++++..++.... . ..
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 5778999999999999999998888 8999999 8899999988765421000 0 01
Q ss_pred ce-EEEEEecCCCCC-CCcCCCCCcEEEEccccC----CCCcHHHHHHHHHHhhCCCcEEEEEEeee-------------
Q 023543 175 SA-VVTELTWGDDPD-QDLIQPLPDYVLGSDVIY----SEGAVGDLLDTLLQLCGTQTTIFLAGELR------------- 235 (281)
Q Consensus 175 ~i-~~~~l~w~~~~~-~~~~~~~fD~Iia~d~iy----~~~~~~~ll~~l~~ll~~~g~~~l~~~~r------------- 235 (281)
++ .+...+..+... ......+||+|+++.+++ +......+++.+.++|+|||.+++.....
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 214 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSS 214 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccc
Confidence 25 667766544221 111226899999999998 55678899999999999999998875321
Q ss_pred ChhHHHHHHHHHh-cCCeEEEEec
Q 023543 236 NDSVLEYFLEAAM-KDFVIGRVEQ 258 (281)
Q Consensus 236 ~~~~~~~fl~~~~-~~f~v~~i~~ 258 (281)
..-..+.+.+.+. .||.+..+..
T Consensus 215 ~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 215 LPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cccCHHHHHHHHHHCCCEEEEEEE
Confidence 0001223445554 4998877754
No 58
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.51 E-value=1.9e-13 Score=116.08 Aligned_cols=104 Identities=13% Similarity=0.128 Sum_probs=86.9
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVL 200 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Ii 200 (281)
++++|||+|||+|..+..+++.+.+|+++|+ +.+++.+++|+..++ .++.+...|..+ ..+.+.+||+|+
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~---~~~~~~~~D~v~ 108 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE------SNVEFIVGDARK---LSFEDKTFDYVI 108 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCTTS---CCSCTTCEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC------CCceEEECchhc---CCCCCCcEEEEE
Confidence 4789999999999999999999899999999 889999999998875 256777766543 223456899999
Q ss_pred Eccc--cCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 201 GSDV--IYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 201 a~d~--iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
+.++ .++......+++.+.++|+|||.+++....
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 109 FIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp EESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 9999 666667889999999999999999887654
No 59
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.51 E-value=1.1e-13 Score=116.23 Aligned_cols=119 Identities=18% Similarity=0.275 Sum_probs=91.9
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
++++|||+|||+|.+++.++.. +.+|+++|+ +.+++.+++|+..++.. ++.+...++.+.. ...+||+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~----~~~~~D~ 135 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-----NIEPVQSRVEEFP----SEPPFDG 135 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-----SEEEEECCTTTSC----CCSCEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CeEEEecchhhCC----ccCCcCE
Confidence 5789999999999999998875 679999999 88999999999998765 4788887765432 2468999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhcCCeEEEEe
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMKDFVIGRVE 257 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~~f~v~~i~ 257 (281)
|++..+ .....+++.+.++|+|||.+++.........+. .+..+|.+..+.
T Consensus 136 i~~~~~----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~----~~~~g~~~~~~~ 186 (207)
T 1jsx_A 136 VISRAF----ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIA----LLPEEYQVESVV 186 (207)
T ss_dssp EECSCS----SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHH----TSCTTEEEEEEE
T ss_pred EEEecc----CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHH----HHhcCCceeeee
Confidence 997543 567899999999999999998876544443322 223388776654
No 60
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.51 E-value=5.6e-14 Score=118.81 Aligned_cols=119 Identities=10% Similarity=0.062 Sum_probs=92.2
Q ss_pred cchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEE
Q 023543 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (281)
Q Consensus 100 W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~ 178 (281)
|-....+..++..... ..++++|||+|||+|..+..++..+.+|+++|+ +.+++.+++++..+ .++.+
T Consensus 33 ~~~~~~~~~~l~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~ 101 (216)
T 3ofk_A 33 PFERERHTQLLRLSLS----SGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRW-------SHISW 101 (216)
T ss_dssp HHHHHHHHHHHHHHTT----TSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTC-------SSEEE
T ss_pred HhHHHHHHHHHHHHcc----cCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccC-------CCeEE
Confidence 3334445555544321 245679999999999999999999889999999 88999999887653 26778
Q ss_pred EEEecCCCCCCCcCCCCCcEEEEccccCCCCcH---HHHHHHHHHhhCCCcEEEEEEe
Q 023543 179 TELTWGDDPDQDLIQPLPDYVLGSDVIYSEGAV---GDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 179 ~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~---~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
...+..+.. .+.+||+|++..++++.... ..+++.+.++|+|||.++++..
T Consensus 102 ~~~d~~~~~----~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 102 AATDILQFS----TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp EECCTTTCC----CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEcchhhCC----CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 887654432 35789999999999886655 5779999999999999998764
No 61
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.49 E-value=3.2e-13 Score=115.49 Aligned_cols=104 Identities=19% Similarity=0.228 Sum_probs=84.4
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.++.+|||+|||+|..+..++.. +.+|+++|+ +.+++.+++++..++ ++.+...+..+. ... .+||
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~d~~~~---~~~-~~fD 111 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-------KVKYIEADYSKY---DFE-EKYD 111 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-------TEEEEESCTTTC---CCC-SCEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-------CEEEEeCchhcc---CCC-CCce
Confidence 46789999999999999999886 779999999 889999998875542 577777665432 222 6899
Q ss_pred EEEEccccCCCCcHH--HHHHHHHHhhCCCcEEEEEEeee
Q 023543 198 YVLGSDVIYSEGAVG--DLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~--~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
+|++..++++..... .+++.+.++|+|||.++++....
T Consensus 112 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 112 MVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 999999998876554 59999999999999999887543
No 62
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.49 E-value=3.5e-14 Score=124.47 Aligned_cols=139 Identities=20% Similarity=0.162 Sum_probs=94.1
Q ss_pred ccCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCC------------------------C
Q 023543 120 LLHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDL------------------------R 173 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~------------------------~ 173 (281)
..++++|||||||+|+..+.++..|+ +|+++|+ +.|++.++++++.+...... .
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 35788999999999998888888887 5999999 88999999987664211000 0
Q ss_pred CceE-EEEEecCCCCCC-CcCCCCCcEEEEccccCC----CCcHHHHHHHHHHhhCCCcEEEEEEeeeC-----------
Q 023543 174 GSAV-VTELTWGDDPDQ-DLIQPLPDYVLGSDVIYS----EGAVGDLLDTLLQLCGTQTTIFLAGELRN----------- 236 (281)
Q Consensus 174 ~~i~-~~~l~w~~~~~~-~~~~~~fD~Iia~d~iy~----~~~~~~ll~~l~~ll~~~g~~~l~~~~r~----------- 236 (281)
.++. +...|..+.... ....++||+|+++.++++ ......+++.+.++|||||.++++.....
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~ 212 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFS 212 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEee
Confidence 1232 455443331111 112468999999998865 24567888899999999999998863221
Q ss_pred --hhHHHHHHHHHh-cCCeEEEEec
Q 023543 237 --DSVLEYFLEAAM-KDFVIGRVEQ 258 (281)
Q Consensus 237 --~~~~~~fl~~~~-~~f~v~~i~~ 258 (281)
.-..+.+.+.+. .||.+..+..
T Consensus 213 ~~~~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 213 CVALEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ccccCHHHHHHHHHHCCCEEEEEee
Confidence 002234555555 4899877754
No 63
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.49 E-value=1.4e-13 Score=121.50 Aligned_cols=103 Identities=16% Similarity=0.194 Sum_probs=86.9
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||+|||+|..++.+++.|.+|+++|+ +.+++.+++|+..++. ++.+...|..+.. . ..+||+|
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~---~-~~~fD~i 188 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENL------NISTALYDINAAN---I-QENYDFI 188 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC------CEEEEECCGGGCC---C-CSCEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCC------ceEEEEecccccc---c-cCCccEE
Confidence 47889999999999999999999999999999 8899999999998864 4677776654321 1 5789999
Q ss_pred EEccccCCC--CcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 200 LGSDVIYSE--GAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 200 ia~d~iy~~--~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
+++.++++. .....+++.+.++|+|||.+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 189 VSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp EECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 999999864 6688999999999999999777654
No 64
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.49 E-value=2e-13 Score=126.13 Aligned_cols=116 Identities=16% Similarity=0.188 Sum_probs=91.7
Q ss_pred ccCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCC---CCCCceEEEEEecCCCCCC---
Q 023543 120 LLHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHG---DLRGSAVVTELTWGDDPDQ--- 189 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~---~~~~~i~~~~l~w~~~~~~--- 189 (281)
..++.+|||||||+|..++.+++. +.+|+++|+ +.+++.+++|+..+.... ....++.+...++.+....
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 357889999999999999988874 559999999 889999999998762110 0024688888776542111
Q ss_pred CcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 190 DLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 190 ~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
.+.+.+||+|++..++++..+...+++.+.++|+|||.++++....
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 3456789999999999998899999999999999999999886543
No 65
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.49 E-value=5.2e-13 Score=119.76 Aligned_cols=106 Identities=13% Similarity=0.129 Sum_probs=89.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..++.+++. |.+|+++|+ +.+++.+++++..++.. .++.+...++.+. +.+||+
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~------~~~fD~ 158 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTN----RSRQVLLQGWEDF------AEPVDR 158 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCS----SCEEEEESCGGGC------CCCCSE
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC----CceEEEECChHHC------CCCcCE
Confidence 46789999999999999988876 899999999 88999999999887764 4677777665321 268999
Q ss_pred EEEccccCCC--CcHHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 199 VLGSDVIYSE--GAVGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 199 Iia~d~iy~~--~~~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
|++..++++. .....+++.+.++|+|||.+++......
T Consensus 159 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 159 IVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp EEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred EEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 9999999886 6899999999999999999998876644
No 66
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.48 E-value=2.2e-13 Score=119.53 Aligned_cols=119 Identities=21% Similarity=0.207 Sum_probs=95.9
Q ss_pred HHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEE
Q 023543 103 GVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVT 179 (281)
Q Consensus 103 s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~ 179 (281)
...+.+++... ....++.+|||||||+|..+..+++. +.+|+++|+ +.+++.+++++..++.. ++.+.
T Consensus 22 ~~~l~~~l~~~----~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~ 92 (276)
T 3mgg_A 22 AETLEKLLHHD----TVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-----NVKFL 92 (276)
T ss_dssp -CHHHHHHHTT----CCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEE
T ss_pred HHHHHHHHhhc----ccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CcEEE
Confidence 34455555543 22357889999999999999999886 678999999 88999999999988764 67777
Q ss_pred EEecCCCCCCCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 180 ELTWGDDPDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 180 ~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
..|..+ ..+.+.+||+|+++.++++..+...+++.+.++|+|||.+++...
T Consensus 93 ~~d~~~---~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 93 QANIFS---LPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp ECCGGG---CCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred Eccccc---CCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 766543 223457899999999999999999999999999999999988753
No 67
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.48 E-value=3.8e-13 Score=110.66 Aligned_cols=136 Identities=15% Similarity=0.092 Sum_probs=99.8
Q ss_pred HHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEe
Q 023543 104 VVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELT 182 (281)
Q Consensus 104 ~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~ 182 (281)
..+..++..... ..++.+|||+|||+|..++.+++.+.+|+++|+ +.+++.+++|+..++.. .++.+...+
T Consensus 19 ~~~~~~~~~~~~----~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~----~~~~~~~~d 90 (192)
T 1l3i_A 19 MEVRCLIMCLAE----PGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLG----DNVTLMEGD 90 (192)
T ss_dssp HHHHHHHHHHHC----CCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCC----TTEEEEESC
T ss_pred HHHHHHHHHhcC----CCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCC----cceEEEecC
Confidence 344455544322 356889999999999999999988889999999 88999999999988763 367777766
Q ss_pred cCCCCCCCcCC-CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEE
Q 023543 183 WGDDPDQDLIQ-PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRV 256 (281)
Q Consensus 183 w~~~~~~~~~~-~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i 256 (281)
+.+. +.. .+||+|++..++ .....+++.+.++|+|||.+++..... .....+.+.+. .+|.++.+
T Consensus 91 ~~~~----~~~~~~~D~v~~~~~~---~~~~~~l~~~~~~l~~gG~l~~~~~~~--~~~~~~~~~l~~~g~~~~~~ 157 (192)
T 1l3i_A 91 APEA----LCKIPDIDIAVVGGSG---GELQEILRIIKDKLKPGGRIIVTAILL--ETKFEAMECLRDLGFDVNIT 157 (192)
T ss_dssp HHHH----HTTSCCEEEEEESCCT---TCHHHHHHHHHHTEEEEEEEEEEECBH--HHHHHHHHHHHHTTCCCEEE
T ss_pred HHHh----cccCCCCCEEEECCch---HHHHHHHHHHHHhcCCCcEEEEEecCc--chHHHHHHHHHHCCCceEEE
Confidence 5331 122 479999988765 356899999999999999988876543 22344555555 36765444
No 68
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.48 E-value=9.3e-14 Score=121.82 Aligned_cols=109 Identities=12% Similarity=0.047 Sum_probs=85.4
Q ss_pred HHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEec
Q 023543 105 VLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTW 183 (281)
Q Consensus 105 ~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w 183 (281)
.+.++|... ...+++|||||||+|..+..++..+.+|+++|+ +.|++.+++ ..++.+...+.
T Consensus 28 ~l~~~l~~~------~~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~-----------~~~v~~~~~~~ 90 (257)
T 4hg2_A 28 ALFRWLGEV------APARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALR-----------HPRVTYAVAPA 90 (257)
T ss_dssp HHHHHHHHH------SSCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCC-----------CTTEEEEECCT
T ss_pred HHHHHHHHh------cCCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhh-----------cCCceeehhhh
Confidence 356777654 234679999999999999999999999999999 788876642 13577777554
Q ss_pred CCCCCCCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 184 GDDPDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 184 ~~~~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
. +..+.+.+||+|+++.++++. ..+.+++.+.++|||||.+.+....
T Consensus 91 e---~~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 91 E---DTGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp T---CCCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred h---hhcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECC
Confidence 3 334567899999999999775 4788999999999999998766543
No 69
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.48 E-value=3.5e-13 Score=122.70 Aligned_cols=164 Identities=13% Similarity=0.151 Sum_probs=111.9
Q ss_pred eEEEEeCCCCCCCCCCcCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcC--CEEEEEec-hhH
Q 023543 79 SLSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDR 155 (281)
Q Consensus 79 ~l~i~q~~~~~~~~g~tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g--~~V~~tD~-~~~ 155 (281)
.+.+...++.++... +...+..+.+.+.. ..+++|||||||+|.+++.+++.+ .+|+++|+ +.+
T Consensus 166 ~~~~~~~~gvf~~~~-----~d~~~~~ll~~l~~--------~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~ 232 (343)
T 2pjd_A 166 GLTVKTLPGVFSRDG-----LDVGSQLLLSTLTP--------HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPA 232 (343)
T ss_dssp TEEEEECTTCTTSSS-----CCHHHHHHHHHSCT--------TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHH
T ss_pred ceEEEecCCccCCCC-----CcHHHHHHHHhcCc--------CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHH
Confidence 355666666654222 23445555555421 246799999999999999999876 47999999 789
Q ss_pred HHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCC-----CCcHHHHHHHHHHhhCCCcEEEE
Q 023543 156 LRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYS-----EGAVGDLLDTLLQLCGTQTTIFL 230 (281)
Q Consensus 156 l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~-----~~~~~~ll~~l~~ll~~~g~~~l 230 (281)
++.+++|+..|+.. +.+.. ++..+. .+.+||+|+++.++++ ......+++.+.++|+|||.+++
T Consensus 233 l~~a~~~~~~~~~~------~~~~~---~d~~~~--~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 233 VEASRATLAANGVE------GEVFA---SNVFSE--VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp HHHHHHHHHHTTCC------CEEEE---CSTTTT--CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHHHHhCCC------CEEEE---cccccc--ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 99999999998754 33433 333222 2568999999988764 34568899999999999999988
Q ss_pred EEeeeChhHHHHHHHHHhcCCeEEEEecCCCCCCCCCCcEEEEEEEec
Q 023543 231 AGELRNDSVLEYFLEAAMKDFVIGRVEQTQWHPDYCSPRVVVYILVKK 278 (281)
Q Consensus 231 ~~~~r~~~~~~~fl~~~~~~f~v~~i~~~~~~~~~~~~~~~i~~~~~k 278 (281)
......+ ...+++.....+.. +. ...++.||...|.
T Consensus 302 ~~~~~~~--~~~~l~~~f~~~~~--~~--------~~~gf~v~~~~k~ 337 (343)
T 2pjd_A 302 VANAFLP--YPDVLDETFGFHEV--IA--------QTGRFKVYRAIMT 337 (343)
T ss_dssp EEETTSS--HHHHHHHHHSCCEE--EE--------ECSSEEEEEEEC-
T ss_pred EEcCCCC--cHHHHHHhcCceEE--Ee--------eCCCEEEEEEEeC
Confidence 7654332 23345554444432 22 3568888888664
No 70
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.48 E-value=5.4e-14 Score=118.47 Aligned_cols=111 Identities=18% Similarity=0.110 Sum_probs=85.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCC-Cc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPL-PD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~-fD 197 (281)
.++++|||+|||+|.+++.++..++ +|+++|+ +++++.+++|+..++.. ..++.+...|..+... .+.+.+ ||
T Consensus 52 ~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---~~~v~~~~~d~~~~~~-~~~~~~~fD 127 (201)
T 2ift_A 52 IHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCS---SEQAEVINQSSLDFLK-QPQNQPHFD 127 (201)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC---TTTEEEECSCHHHHTT-SCCSSCCEE
T ss_pred cCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCC---ccceEEEECCHHHHHH-hhccCCCCC
Confidence 3688999999999999998777665 8999999 88999999999998762 0257777655432111 112457 99
Q ss_pred EEEEccccCCCCcHHHHHHHH--HHhhCCCcEEEEEEeeeC
Q 023543 198 YVLGSDVIYSEGAVGDLLDTL--LQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l--~~ll~~~g~~~l~~~~r~ 236 (281)
+|++..+ |.....+.+++.+ .++|+|||.++++.....
T Consensus 128 ~I~~~~~-~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 128 VVFLDPP-FHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp EEEECCC-SSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred EEEECCC-CCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 9998766 6677888899988 557999999998876554
No 71
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.48 E-value=2.3e-13 Score=113.48 Aligned_cols=132 Identities=15% Similarity=0.085 Sum_probs=94.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++++|||+|||+|..++.+++. ..+|+++|+ +.+++.+++|+..++.. .++.+...|..+... ..+.+|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~--~~~~~f 94 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI----DRVTLIKDGHQNMDK--YIDCPV 94 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG----GGEEEECSCGGGGGG--TCCSCE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CCeEEEECCHHHHhh--hccCCc
Confidence 46789999999999999988875 258999999 88999999999998763 367777766433211 234689
Q ss_pred cEEEEccccCC---------CCcHHHHHHHHHHhhCCCcEEEEEEeeeC------hhHHHHHHHHHh-cCCeEEEEec
Q 023543 197 DYVLGSDVIYS---------EGAVGDLLDTLLQLCGTQTTIFLAGELRN------DSVLEYFLEAAM-KDFVIGRVEQ 258 (281)
Q Consensus 197 D~Iia~d~iy~---------~~~~~~ll~~l~~ll~~~g~~~l~~~~r~------~~~~~~fl~~~~-~~f~v~~i~~ 258 (281)
|+|++...++. ......+++.+.++|+|||.+++...... ......|+..+. .+|.+.....
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~ 172 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDF 172 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEE
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEe
Confidence 99997754422 12346799999999999999888753321 223444554444 3677776653
No 72
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.47 E-value=5e-13 Score=121.69 Aligned_cols=103 Identities=17% Similarity=0.221 Sum_probs=85.4
Q ss_pred ccCCCeEEEECCCcCHHHHHHHHcCC-EEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 120 LLHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
..++++|||||||+|.+++.+++.|+ +|+++|++++++.+++|++.|+.. .++.+...+..+ ..+...+||+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~----~~i~~~~~d~~~---~~~~~~~~D~ 134 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLE----DTITLIKGKIEE---VHLPVEKVDV 134 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCT----TTEEEEESCTTT---SCCSCSCEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCC----CcEEEEEeeHHH---hcCCCCcEEE
Confidence 46789999999999999999999886 899999955999999999999874 478888765443 2344568999
Q ss_pred EEEccc---cCCCCcHHHHHHHHHHhhCCCcEEE
Q 023543 199 VLGSDV---IYSEGAVGDLLDTLLQLCGTQTTIF 229 (281)
Q Consensus 199 Iia~d~---iy~~~~~~~ll~~l~~ll~~~g~~~ 229 (281)
|++..+ +.+....+.+++.+.++|+|||.++
T Consensus 135 Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 135 IISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 998774 4556778899999999999999987
No 73
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.47 E-value=1.1e-12 Score=111.56 Aligned_cols=128 Identities=13% Similarity=0.079 Sum_probs=90.6
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.+.+|||||||+|..++.+|+. +.+|+++|+ +.+++.+++|+..++.. ++.+...|..+ ....+.+..||.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~-----nv~~~~~d~~~-l~~~~~~~~~d~ 111 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQ-----NVKLLNIDADT-LTDVFEPGEVKR 111 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCS-----SEEEECCCGGG-HHHHCCTTSCCE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCC-----CEEEEeCCHHH-HHhhcCcCCcCE
Confidence 5679999999999999999885 678999999 88999999999988764 67777766543 111134567999
Q ss_pred EEEccccCCCC--------cHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEe
Q 023543 199 VLGSDVIYSEG--------AVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVE 257 (281)
Q Consensus 199 Iia~d~iy~~~--------~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~ 257 (281)
|+......+.. ..+.+++.+.++|+|||.+++..... ...+..++.+. .+|....+.
T Consensus 112 v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~--~~~~~~~~~~~~~g~~~~~~~ 177 (213)
T 2fca_A 112 VYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR--GLFEYSLKSFSEYGLLLTYVS 177 (213)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH--HHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH--HHHHHHHHHHHHCCCcccccc
Confidence 88753322211 14789999999999999998875432 22222334443 378766654
No 74
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.47 E-value=2.9e-13 Score=117.41 Aligned_cols=106 Identities=13% Similarity=0.080 Sum_probs=88.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|..+..++..+.+|+++|+ +.+++.+++++ .+.. .++.+...++.+ ..+.+.+||+|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~-----~~~~~~~~d~~~---~~~~~~~fD~v 108 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGVD-----RKVQVVQADARA---IPLPDESVHGV 108 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTSC-----TTEEEEESCTTS---CCSCTTCEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hccC-----CceEEEEccccc---CCCCCCCeeEE
Confidence 46789999999999999999988999999999 88999999887 3222 367787766543 22445789999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
++..++++..+...+++.+.++|+|||.+++.....
T Consensus 109 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (263)
T 2yqz_A 109 IVVHLWHLVPDWPKVLAEAIRVLKPGGALLEGWDQA 144 (263)
T ss_dssp EEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EECCchhhcCCHHHHHHHHHHHCCCCcEEEEEecCC
Confidence 999999998889999999999999999988874433
No 75
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.47 E-value=9.9e-13 Score=112.72 Aligned_cols=100 Identities=17% Similarity=0.145 Sum_probs=80.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||+|||+|..+..+++. .+|+++|+ +.+++.+++|+..++. ++.+...+..+. .. ..+||+|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~---~~-~~~fD~v 100 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETNR------HVDFWVQDMREL---EL-PEPVDAI 100 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTTC------CCEEEECCGGGC---CC-SSCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcCC------ceEEEEcChhhc---CC-CCCcCEE
Confidence 35689999999999999998888 89999999 8899999999887652 466666554332 12 2689999
Q ss_pred EEcc-ccCCC---CcHHHHHHHHHHhhCCCcEEEEE
Q 023543 200 LGSD-VIYSE---GAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 200 ia~d-~iy~~---~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
++.. ++++. .....+++.+.++|+|||.+++.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 101 TILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp EECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 9864 77664 56788999999999999998873
No 76
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.47 E-value=5.9e-13 Score=118.47 Aligned_cols=108 Identities=16% Similarity=0.101 Sum_probs=84.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||||||+|..+..+++.|.+|+++|+ +.+++.+++++..++... ..++.+...|..+.. + ..+||+|
T Consensus 81 ~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~--~~~v~~~~~d~~~~~---~-~~~fD~v 154 (299)
T 3g2m_A 81 PVSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADV--RDRCTLVQGDMSAFA---L-DKRFGTV 154 (299)
T ss_dssp CCCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHH--HTTEEEEECBTTBCC---C-SCCEEEE
T ss_pred CCCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhccccc--ccceEEEeCchhcCC---c-CCCcCEE
Confidence 34569999999999999999999999999999 889999999988765310 026788887765421 2 5789988
Q ss_pred EEc-cccCCCC--cHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGS-DVIYSEG--AVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~-d~iy~~~--~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
+++ .++++.. ....+++.+.++|+|||.+++....
T Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 155 VISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp EECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 865 5555543 5789999999999999999887543
No 77
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.46 E-value=7.3e-14 Score=123.61 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=86.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||||||+|..++.++..|++|+++|+ +.+++.+++|+..+..... ..++.+...++.+.....+.+.+||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPA-FDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHH-HHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccc-cceeeEeecChhhCccccccCCCeEEE
Confidence 46789999999999999999999999999999 8899999998755432200 024555665543211001345789999
Q ss_pred EEc-cccCCCCc-------HHHHHHHHHHhhCCCcEEEEEEe
Q 023543 200 LGS-DVIYSEGA-------VGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 200 ia~-d~iy~~~~-------~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
++. .++++... ...+++.+.++|+|||.+++...
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 998 88888776 99999999999999999988754
No 78
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.46 E-value=8.7e-13 Score=113.93 Aligned_cols=129 Identities=9% Similarity=-0.038 Sum_probs=96.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC-CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g-~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..+..++..+ .+|+++|+ +.+++.+++++..+ .++.+...++.+. .+.+.+||+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~---~~~~~~fD~ 161 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-------PVGKFILASMETA---TLPPNTYDL 161 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-------SEEEEEESCGGGC---CCCSSCEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-------CceEEEEccHHHC---CCCCCCeEE
Confidence 467899999999999999888764 47999999 88999999887654 2577777665432 234568999
Q ss_pred EEEccccCCC--CcHHHHHHHHHHhhCCCcEEEEEEeeeCh-------------hHHHHHHHHHh-cCCeEEEEecC
Q 023543 199 VLGSDVIYSE--GAVGDLLDTLLQLCGTQTTIFLAGELRND-------------SVLEYFLEAAM-KDFVIGRVEQT 259 (281)
Q Consensus 199 Iia~d~iy~~--~~~~~ll~~l~~ll~~~g~~~l~~~~r~~-------------~~~~~fl~~~~-~~f~v~~i~~~ 259 (281)
|++..++++. .....+++.+.++|+|||.+++....... ...+.+.+.+. .||.+..+...
T Consensus 162 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 162 IVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQ 238 (254)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEEC
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeec
Confidence 9999999887 56899999999999999999988642110 01233444454 49998777543
No 79
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.46 E-value=5.1e-14 Score=116.01 Aligned_cols=127 Identities=17% Similarity=0.139 Sum_probs=93.3
Q ss_pred chHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcC-CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEE
Q 023543 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (281)
Q Consensus 101 ~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g-~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~ 178 (281)
+++..+.+++...+. ...++++|||+|||+|..++.+++.+ .+|+++|+ +.+++.+++|+..++.. .++.+
T Consensus 26 p~~~~~~~~~~~~l~---~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~~~ 98 (187)
T 2fhp_A 26 PTTDKVKESIFNMIG---PYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEP----EKFEV 98 (187)
T ss_dssp CCCHHHHHHHHHHHC---SCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCG----GGEEE
T ss_pred cCHHHHHHHHHHHHH---hhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCC----cceEE
Confidence 445555555554432 12478899999999999999888776 48999999 88999999999998764 46788
Q ss_pred EEEecCCCCCC-CcCCCCCcEEEEccccCCCCcHHHHHHHH--HHhhCCCcEEEEEEeee
Q 023543 179 TELTWGDDPDQ-DLIQPLPDYVLGSDVIYSEGAVGDLLDTL--LQLCGTQTTIFLAGELR 235 (281)
Q Consensus 179 ~~l~w~~~~~~-~~~~~~fD~Iia~d~iy~~~~~~~ll~~l--~~ll~~~g~~~l~~~~r 235 (281)
...|+.+.... ...+.+||+|++..+ |.....+.+++.+ .++|+|||.+++.....
T Consensus 99 ~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 99 RKMDANRALEQFYEEKLQFDLVLLDPP-YAKQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EESCHHHHHHHHHHTTCCEEEEEECCC-GGGCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EECcHHHHHHHHHhcCCCCCEEEECCC-CCchhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 87665431110 011468999998766 6666778888888 77899999998876644
No 80
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.46 E-value=2.7e-13 Score=123.83 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=87.7
Q ss_pred ccCCCeEEEECCCcCHHHHHHHHcCC-EEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 120 LLHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
..++++|||+|||+|.+++.+++.|+ +|+++|++++++.+++|+..|+.. +++.+...++.+. .++..+||+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~----~~v~~~~~d~~~~---~~~~~~fD~ 136 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLD----HVVTIIKGKVEEV---ELPVEKVDI 136 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCT----TTEEEEESCTTTC---CCSSSCEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCC----CcEEEEECcHHHc---cCCCCceEE
Confidence 46889999999999999999999877 899999966999999999999876 5688888776543 344578999
Q ss_pred EEEccc---cCCCCcHHHHHHHHHHhhCCCcEEEE
Q 023543 199 VLGSDV---IYSEGAVGDLLDTLLQLCGTQTTIFL 230 (281)
Q Consensus 199 Iia~d~---iy~~~~~~~ll~~l~~ll~~~g~~~l 230 (281)
|++..+ +.+....+.+++.+.++|+|||.++.
T Consensus 137 Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 137 IISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 999665 34468899999999999999999753
No 81
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.46 E-value=1.1e-13 Score=116.64 Aligned_cols=107 Identities=15% Similarity=0.120 Sum_probs=84.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++++|||+|||+|.+++.++..++ +|+++|+ +.+++.+++|+..++.. ++.+...|+.+... ....+||+
T Consensus 53 ~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~-----~v~~~~~D~~~~~~--~~~~~fD~ 125 (202)
T 2fpo_A 53 IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAG-----NARVVNSNAMSFLA--QKGTPHNI 125 (202)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC-----SEEEECSCHHHHHS--SCCCCEEE
T ss_pred cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEECCHHHHHh--hcCCCCCE
Confidence 3688999999999999998777775 8999999 88999999999998763 57777655432111 13457999
Q ss_pred EEEccccCCCCcHHHHHHHHHH--hhCCCcEEEEEEeee
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQ--LCGTQTTIFLAGELR 235 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~--ll~~~g~~~l~~~~r 235 (281)
|++... |.......+++.+.+ +|+|+|.++++....
T Consensus 126 V~~~~p-~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 126 VFVDPP-FRRGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp EEECCS-SSTTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred EEECCC-CCCCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 987655 667788888998877 499999998887654
No 82
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.46 E-value=5.1e-13 Score=114.65 Aligned_cols=124 Identities=13% Similarity=0.090 Sum_probs=93.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC--EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~--~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.+|.+|||+|||+|.+++.+++.+. +|+++|+ +.+++.|++|++.|++. +++.+...|+.+..+. ..+||
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~----~~i~~~~~d~l~~l~~---~~~~D 86 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK----EKIQVRLANGLAAFEE---TDQVS 86 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT----TTEEEEECSGGGGCCG---GGCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEECchhhhccc---CcCCC
Confidence 4678999999999999999999874 6999999 88999999999999986 5788888665432221 12699
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhcCCeEEEE
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~~f~v~~i 256 (281)
+|+.+..- -..+..++......|+++|.+++... .....+..|+. ..||.+...
T Consensus 87 ~IviaG~G--g~~i~~Il~~~~~~L~~~~~lVlq~~-~~~~~vr~~L~--~~Gf~i~~e 140 (225)
T 3kr9_A 87 VITIAGMG--GRLIARILEEGLGKLANVERLILQPN-NREDDLRIWLQ--DHGFQIVAE 140 (225)
T ss_dssp EEEEEEEC--HHHHHHHHHHTGGGCTTCCEEEEEES-SCHHHHHHHHH--HTTEEEEEE
T ss_pred EEEEcCCC--hHHHHHHHHHHHHHhCCCCEEEEECC-CCHHHHHHHHH--HCCCEEEEE
Confidence 88866542 23357888888889999999877655 44445555553 358876554
No 83
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.46 E-value=4.1e-13 Score=113.09 Aligned_cols=101 Identities=11% Similarity=-0.028 Sum_probs=83.9
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||+|||+|..+..++..+.+|+++|+ +.+++.+++ ++. .++.+...|..+. ..+.+||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~----~~~-----~~~~~~~~d~~~~----~~~~~~D~v 111 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR----HGL-----DNVEFRQQDLFDW----TPDRQWDAV 111 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG----GCC-----TTEEEEECCTTSC----CCSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh----cCC-----CCeEEEecccccC----CCCCceeEE
Confidence 45679999999999999999999999999999 888998887 332 3677777665432 456789999
Q ss_pred EEccccCCCCc--HHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGA--VGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~--~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
+++.++++... ...+++.+.++|+|||.++++...
T Consensus 112 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 112 FFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 99999988766 589999999999999999888653
No 84
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.46 E-value=5.1e-13 Score=116.42 Aligned_cols=97 Identities=14% Similarity=0.035 Sum_probs=79.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||||||+|..+..+++.+.+|+++|+ +.+++.++++.. ++.+...|..+. .. +.+||+|
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~----------~~~~~~~d~~~~---~~-~~~fD~v 114 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP----------DAVLHHGDMRDF---SL-GRRFSAV 114 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTTC---CC-SCCEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC----------CCEEEECChHHC---Cc-cCCcCEE
Confidence 35689999999999999999999999999999 889999987743 356666554432 12 5789999
Q ss_pred EEcc-ccCCC---CcHHHHHHHHHHhhCCCcEEEEE
Q 023543 200 LGSD-VIYSE---GAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 200 ia~d-~iy~~---~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
++.. ++++. .....+++.+.++|+|||.+++.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 115 TCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9987 88775 46778999999999999998884
No 85
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.45 E-value=3.7e-14 Score=119.08 Aligned_cols=142 Identities=15% Similarity=0.131 Sum_probs=80.2
Q ss_pred hHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEE
Q 023543 102 SGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (281)
Q Consensus 102 ~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~ 178 (281)
.+..+.+++...+.. ..++++|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++. ++.+
T Consensus 13 ~~~~~~~~~~~~l~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~ 83 (215)
T 4dzr_A 13 DTEVLVEEAIRFLKR---MPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA------VVDW 83 (215)
T ss_dssp HHHHHHHHHHHHHTT---CCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------------C
T ss_pred cHHHHHHHHHHHhhh---cCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC------ceEE
Confidence 355666666654321 146789999999999999999987 458999999 8899999999988754 2344
Q ss_pred EEEecCCCCCCCcCC-----CCCcEEEEccccCCCCcH--------------------------HHHHHHHHHhhCCCcE
Q 023543 179 TELTWGDDPDQDLIQ-----PLPDYVLGSDVIYSEGAV--------------------------GDLLDTLLQLCGTQTT 227 (281)
Q Consensus 179 ~~l~w~~~~~~~~~~-----~~fD~Iia~d~iy~~~~~--------------------------~~ll~~l~~ll~~~g~ 227 (281)
...|+.+ .+.. .+||+|+++...+..... ..+++.+.++|+|||.
T Consensus 84 ~~~d~~~----~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 159 (215)
T 4dzr_A 84 AAADGIE----WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRA 159 (215)
T ss_dssp CHHHHHH----HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSE
T ss_pred EEcchHh----hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCe
Confidence 4444332 1222 789999987665442221 7788888899999999
Q ss_pred -EEEEEeeeChhHHHHHHHHHhcCCeEEEE
Q 023543 228 -IFLAGELRNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 228 -~~l~~~~r~~~~~~~fl~~~~~~f~v~~i 256 (281)
+++.........+..++..+..+|....+
T Consensus 160 l~~~~~~~~~~~~~~~~l~~~~~gf~~~~~ 189 (215)
T 4dzr_A 160 GVFLEVGHNQADEVARLFAPWRERGFRVRK 189 (215)
T ss_dssp EEEEECTTSCHHHHHHHTGGGGGGTEECCE
T ss_pred EEEEEECCccHHHHHHHHHHhhcCCceEEE
Confidence 66655544444444444433457754333
No 86
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.45 E-value=2.9e-13 Score=113.51 Aligned_cols=105 Identities=11% Similarity=0.064 Sum_probs=84.4
Q ss_pred cCCCeEEEECCCcCHHH-HHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVG-CIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~-i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..+ ..++..+.+|+++|+ +.+++.+++++..++. ++.+...+..+ ..+.+.+||+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~---~~~~~~~fD~ 92 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNF------KLNISKGDIRK---LPFKDESMSF 92 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTC------CCCEEECCTTS---CCSCTTCEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC------ceEEEECchhh---CCCCCCceeE
Confidence 45789999999999874 455668889999999 8899999999887753 35566655432 2234578999
Q ss_pred EEEccccCCC--CcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 199 VLGSDVIYSE--GAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 199 Iia~d~iy~~--~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
|++..++++. .....+++.+.++|+|||.+++....
T Consensus 93 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 93 VYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 9999998886 77899999999999999999887654
No 87
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.45 E-value=3.8e-13 Score=119.15 Aligned_cols=140 Identities=14% Similarity=0.156 Sum_probs=91.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhh--------------cCCCC-----------C
Q 023543 121 LHGKKIVELGSGCGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNL--------------RHGDL-----------R 173 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~--------------~~~~~-----------~ 173 (281)
.++.+|||||||+|...+.++. .+.+|+++|+ +.|++.+++++..+. ..... .
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 4788999999999997665555 4679999999 889999988664311 00000 0
Q ss_pred CceEEEEEecCCCCC---CCcCCCCCcEEEEccccCC----CCcHHHHHHHHHHhhCCCcEEEEEEeeeC----------
Q 023543 174 GSAVVTELTWGDDPD---QDLIQPLPDYVLGSDVIYS----EGAVGDLLDTLLQLCGTQTTIFLAGELRN---------- 236 (281)
Q Consensus 174 ~~i~~~~l~w~~~~~---~~~~~~~fD~Iia~d~iy~----~~~~~~ll~~l~~ll~~~g~~~l~~~~r~---------- 236 (281)
..+.+...|..+..+ ..+...+||+|+++.++++ ......+++.+.++|+|||.+++......
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeee
Confidence 012334434433111 1133456999999999987 55789999999999999999988743211
Q ss_pred ---hhHHHHHHHHHh-cCCeEEEEecCC
Q 023543 237 ---DSVLEYFLEAAM-KDFVIGRVEQTQ 260 (281)
Q Consensus 237 ---~~~~~~fl~~~~-~~f~v~~i~~~~ 260 (281)
.-..+.+.+.+. .||.+..+....
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 012234455555 489887775544
No 88
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.45 E-value=5.2e-13 Score=117.70 Aligned_cols=137 Identities=12% Similarity=0.149 Sum_probs=100.6
Q ss_pred chHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceE
Q 023543 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAV 177 (281)
Q Consensus 101 ~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~ 177 (281)
+.+..+.+++..... .++.+|||+|||+|.+++.+++. +.+|+++|+ +.+++.+++|+..++.. ++.
T Consensus 93 ~~te~l~~~~l~~~~-----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-----~v~ 162 (276)
T 2b3t_A 93 PDTECLVEQALARLP-----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-----NIH 162 (276)
T ss_dssp TTHHHHHHHHHHHSC-----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-----SEE
T ss_pred chHHHHHHHHHHhcc-----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----ceE
Confidence 446667777665421 35679999999999999999864 679999999 88999999999998764 577
Q ss_pred EEEEecCCCCCCCcCCCCCcEEEEccccCCC-------------------------CcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 178 VTELTWGDDPDQDLIQPLPDYVLGSDVIYSE-------------------------GAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 178 ~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~-------------------------~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
+...|+.+. +...+||+|+++.+.... ..+..+++.+.++|+|||.+++..
T Consensus 163 ~~~~d~~~~----~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 163 ILQSDWFSA----LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp EECCSTTGG----GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEEcchhhh----cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 777666432 224689999987433221 245788899999999999998876
Q ss_pred eeeChhHHHHHHHHHhcCCeE
Q 023543 233 ELRNDSVLEYFLEAAMKDFVI 253 (281)
Q Consensus 233 ~~r~~~~~~~fl~~~~~~f~v 253 (281)
.......+..++.. .||..
T Consensus 239 ~~~~~~~~~~~l~~--~Gf~~ 257 (276)
T 2b3t_A 239 GWQQGEAVRQAFIL--AGYHD 257 (276)
T ss_dssp CSSCHHHHHHHHHH--TTCTT
T ss_pred CchHHHHHHHHHHH--CCCcE
Confidence 65555554444433 47763
No 89
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.45 E-value=2.5e-12 Score=116.72 Aligned_cols=130 Identities=13% Similarity=0.017 Sum_probs=91.7
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC-cCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-LIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~-~~~~~fD~I 199 (281)
++++|||+|||+|.+++.+++.|++|+++|+ +.+++.+++|+..|++.. .++.+...|..+..... ..+.+||+|
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~---~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQ---APIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTT---SCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCc---cceEEEECcHHHHHHHHHhcCCCceEE
Confidence 5679999999999999999999999999999 889999999999998751 13676665432211000 014689999
Q ss_pred EEccccCC----------CCcHHHHHHHHHHhhCCCcEEEEEEeeeC---hhHHHHHHHHHh--cCCeEE
Q 023543 200 LGSDVIYS----------EGAVGDLLDTLLQLCGTQTTIFLAGELRN---DSVLEYFLEAAM--KDFVIG 254 (281)
Q Consensus 200 ia~d~iy~----------~~~~~~ll~~l~~ll~~~g~~~l~~~~r~---~~~~~~fl~~~~--~~f~v~ 254 (281)
++....|. ...+..+++.+.++|+|||.+++...... ...+...+.... .++.++
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 98544332 22467889999999999999777665443 233444444332 367765
No 90
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.45 E-value=8.5e-13 Score=113.57 Aligned_cols=124 Identities=15% Similarity=0.107 Sum_probs=93.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC--EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~--~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.+|.+|||+|||+|.+++.+++.+. +|+++|+ +.+++.|++|++.|++. +++.+...|+.+... ...+||
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~----~~I~~~~gD~l~~~~---~~~~~D 92 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLT----SKIDVRLANGLSAFE---EADNID 92 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCT----TTEEEEECSGGGGCC---GGGCCC
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECchhhccc---cccccC
Confidence 4678999999999999999999874 6999999 88999999999999986 578888866543221 223799
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhcCCeEEEE
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~~f~v~~i 256 (281)
+|+.+.+. -..+..++......|+++|.++++... ....+..|+. ..||.+...
T Consensus 93 ~IviaGmG--g~lI~~IL~~~~~~l~~~~~lIlqp~~-~~~~lr~~L~--~~Gf~i~~E 146 (230)
T 3lec_A 93 TITICGMG--GRLIADILNNDIDKLQHVKTLVLQPNN-REDDLRKWLA--ANDFEIVAE 146 (230)
T ss_dssp EEEEEEEC--HHHHHHHHHHTGGGGTTCCEEEEEESS-CHHHHHHHHH--HTTEEEEEE
T ss_pred EEEEeCCc--hHHHHHHHHHHHHHhCcCCEEEEECCC-ChHHHHHHHH--HCCCEEEEE
Confidence 98865553 133577888888889999988777654 4445555653 358876554
No 91
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.44 E-value=1.9e-12 Score=106.10 Aligned_cols=146 Identities=16% Similarity=0.090 Sum_probs=96.9
Q ss_pred cchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEE
Q 023543 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (281)
Q Consensus 100 W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~ 178 (281)
.+.+..+.+++... ..++++|||+|||+|.+++.+++.+ +|+++|+ +.+++. . .++.+
T Consensus 7 ~~~~~~l~~~l~~~------~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~------~--------~~~~~ 65 (170)
T 3q87_B 7 GEDTYTLMDALERE------GLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES------H--------RGGNL 65 (170)
T ss_dssp CHHHHHHHHHHHHH------TCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT------C--------SSSCE
T ss_pred CccHHHHHHHHHhh------cCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc------c--------cCCeE
Confidence 45567777776532 2567899999999999999999999 9999999 788776 1 24556
Q ss_pred EEEecCCCCCCCcCCCCCcEEEEccccCCCCc---------HHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-
Q 023543 179 TELTWGDDPDQDLIQPLPDYVLGSDVIYSEGA---------VGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM- 248 (281)
Q Consensus 179 ~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~---------~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~- 248 (281)
...|+.+ .+.+.+||+|+++.+++.... ...+++.+.+.+ |+|.+++....... .+.+.+.+.
T Consensus 66 ~~~d~~~----~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~--~~~l~~~l~~ 138 (170)
T 3q87_B 66 VRADLLC----SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANR--PKEVLARLEE 138 (170)
T ss_dssp EECSTTT----TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGC--HHHHHHHHHH
T ss_pred EECChhh----hcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCC--HHHHHHHHHH
Confidence 6655543 233478999999776654222 245666677767 99999887654332 123444444
Q ss_pred cCCeEEEEecCCCCCCCCCCcEEEEEEEe
Q 023543 249 KDFVIGRVEQTQWHPDYCSPRVVVYILVK 277 (281)
Q Consensus 249 ~~f~v~~i~~~~~~~~~~~~~~~i~~~~~ 277 (281)
.+|....+..... ..+++.+++..|
T Consensus 139 ~gf~~~~~~~~~~----~~e~~~~~~~~~ 163 (170)
T 3q87_B 139 RGYGTRILKVRKI----LGETVYIIKGEK 163 (170)
T ss_dssp TTCEEEEEEEEEC----SSSEEEEEEEEC
T ss_pred CCCcEEEEEeecc----CCceEEEEEEec
Confidence 4899887765332 234444444443
No 92
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.44 E-value=5.3e-13 Score=118.76 Aligned_cols=103 Identities=15% Similarity=0.031 Sum_probs=86.4
Q ss_pred cCCCeEEEECCCcCHHHHHHHH---cCCEEEEEec-hhHHHHHHHHHHHh-hcCCCCCCceEEEEEecCCCCCCCcCC--
Q 023543 121 LHGKKIVELGSGCGLVGCIAAL---LGAQVILTDL-PDRLRLLKKNIENN-LRHGDLRGSAVVTELTWGDDPDQDLIQ-- 193 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~---~g~~V~~tD~-~~~l~~~~~N~~~n-~~~~~~~~~i~~~~l~w~~~~~~~~~~-- 193 (281)
.++++|||+|||+|..+..+++ .+.+|+++|+ +.+++.+++++..+ +.. .++.+...++.+. .+..
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~~v~~~~~d~~~~---~~~~~~ 107 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTY----KNVSFKISSSDDF---KFLGAD 107 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CC----TTEEEEECCTTCC---GGGCTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCC----CceEEEEcCHHhC---Cccccc
Confidence 3688999999999999999994 5779999999 88999999999886 222 4788888776542 2233
Q ss_pred ----CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 023543 194 ----PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 194 ----~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
.+||+|+++.++++. +...+++.+.++|+|||.+++.
T Consensus 108 ~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 108 SVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp TTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEE
Confidence 689999999999999 9999999999999999998773
No 93
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.44 E-value=7.3e-14 Score=116.40 Aligned_cols=102 Identities=15% Similarity=0.040 Sum_probs=80.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
....+|||||||+|.+++.++.. +++|+++|+ +.|++.+++|+..++.. .++.+. + ... .....+||
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~----~~v~~~--d---~~~-~~~~~~~D 117 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTT----IKYRFL--N---KES-DVYKGTYD 117 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCS----SEEEEE--C---CHH-HHTTSEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCC----ccEEEe--c---ccc-cCCCCCcC
Confidence 35779999999999999999875 678999999 88999999999999876 355552 2 111 23456799
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
+|++..+++.-.+.+..+..+.+.|+|+|.+ |+.+
T Consensus 118 vVLa~k~LHlL~~~~~al~~v~~~L~pggvf-ISfp 152 (200)
T 3fzg_A 118 VVFLLKMLPVLKQQDVNILDFLQLFHTQNFV-ISFP 152 (200)
T ss_dssp EEEEETCHHHHHHTTCCHHHHHHTCEEEEEE-EEEE
T ss_pred hhhHhhHHHhhhhhHHHHHHHHHHhCCCCEE-EEeC
Confidence 9999999988655566666888999999875 5555
No 94
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.44 E-value=2.3e-12 Score=111.15 Aligned_cols=153 Identities=14% Similarity=0.095 Sum_probs=103.8
Q ss_pred cCceecchHH-HHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc-C--CEEEEEec-hhHHHHHHHHHHHhhcC
Q 023543 95 TGSVMWDSGV-VLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PDRLRLLKKNIENNLRH 169 (281)
Q Consensus 95 tG~~~W~~s~-~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~-g--~~V~~tD~-~~~l~~~~~N~~~n~~~ 169 (281)
...+.|+--. .||.-|...++. ....+|.+|||||||+|.....+|+. | .+|+++|+ ++|++.+++++...
T Consensus 50 ~e~r~w~p~rsklaa~i~~gl~~-l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--- 125 (233)
T 4df3_A 50 EEYREWNAYRSKLAAALLKGLIE-LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--- 125 (233)
T ss_dssp EEEEECCTTTCHHHHHHHTTCSC-CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---
T ss_pred ceeeeECCCchHHHHHHHhchhh-cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---
Confidence 3688898733 344444433221 22467999999999999999999974 4 47999999 89999998876553
Q ss_pred CCCCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChh-------HHHH
Q 023543 170 GDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDS-------VLEY 242 (281)
Q Consensus 170 ~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~-------~~~~ 242 (281)
.++.....+-.+..........+|+|++ |+ +++.....++..+.+.|||||.++++...+..+ .+.+
T Consensus 126 ----~ni~~V~~d~~~p~~~~~~~~~vDvVf~-d~-~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ 199 (233)
T 4df3_A 126 ----RNIFPILGDARFPEKYRHLVEGVDGLYA-DV-AQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKR 199 (233)
T ss_dssp ----TTEEEEESCTTCGGGGTTTCCCEEEEEE-CC-CCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHH
T ss_pred ----cCeeEEEEeccCccccccccceEEEEEE-ec-cCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHH
Confidence 3566565554433222334467898774 43 455677889999999999999999987665432 2333
Q ss_pred HHHHHh-cCCeEEEEe
Q 023543 243 FLEAAM-KDFVIGRVE 257 (281)
Q Consensus 243 fl~~~~-~~f~v~~i~ 257 (281)
-.+.+. .||.+....
T Consensus 200 ev~~L~~~GF~l~e~i 215 (233)
T 4df3_A 200 EIKTLMDGGLEIKDVV 215 (233)
T ss_dssp HHHHHHHTTCCEEEEE
T ss_pred HHHHHHHCCCEEEEEE
Confidence 344444 499876553
No 95
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.44 E-value=5.5e-13 Score=123.02 Aligned_cols=105 Identities=16% Similarity=0.193 Sum_probs=87.5
Q ss_pred ccCCCeEEEECCCcCHHHHHHHHcCC-EEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 120 LLHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
..++++|||||||+|.+++.+++.|+ +|+++|++.+++.+++|+..|+.. .++.+...+..+.. +. .+||+
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~---~~-~~~D~ 132 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLD----HIVEVIEGSVEDIS---LP-EKVDV 132 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCT----TTEEEEESCGGGCC---CS-SCEEE
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCC----CeEEEEECchhhcC---cC-CcceE
Confidence 46889999999999999999999988 899999998899999999999876 56888887664322 22 78999
Q ss_pred EEEccccCC---CCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 199 VLGSDVIYS---EGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 199 Iia~d~iy~---~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
|++..+.|. ....+.+++.+.++|+|||.+++..
T Consensus 133 Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 133 IISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 999655554 4678999999999999999987543
No 96
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.44 E-value=2.3e-12 Score=111.82 Aligned_cols=122 Identities=12% Similarity=0.111 Sum_probs=91.4
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC--EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~--~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.+|.+|||+|||+|.+++.+++.+. +|+++|+ +.+++.|++|++.|++. +++.+...|+.+... .+.+||
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~----~~I~v~~gD~l~~~~---~~~~~D 92 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT----EQIDVRKGNGLAVIE---KKDAID 92 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT----TTEEEEECSGGGGCC---GGGCCC
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEecchhhccC---cccccc
Confidence 4678999999999999999999874 6999999 88999999999999986 568888866433221 223699
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhcCCeEE
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMKDFVIG 254 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~~f~v~ 254 (281)
+|+.+... -..+..++......|++++.++++... ....+..|+.. .||.+.
T Consensus 93 ~IviagmG--g~lI~~IL~~~~~~L~~~~~lIlq~~~-~~~~lr~~L~~--~Gf~i~ 144 (244)
T 3gnl_A 93 TIVIAGMG--GTLIRTILEEGAAKLAGVTKLILQPNI-AAWQLREWSEQ--NNWLIT 144 (244)
T ss_dssp EEEEEEEC--HHHHHHHHHHTGGGGTTCCEEEEEESS-CHHHHHHHHHH--HTEEEE
T ss_pred EEEEeCCc--hHHHHHHHHHHHHHhCCCCEEEEEcCC-ChHHHHHHHHH--CCCEEE
Confidence 98865443 133577888888889999888777654 44455556533 488863
No 97
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.43 E-value=7.2e-14 Score=114.59 Aligned_cols=127 Identities=13% Similarity=0.150 Sum_probs=88.7
Q ss_pred cchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcC-CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceE
Q 023543 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAV 177 (281)
Q Consensus 100 W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g-~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~ 177 (281)
.+++..+.+++...+. ...++++|||+|||+|..++.+++.+ .+|+++|+ +.+++.+++|+..++.. .++.
T Consensus 12 rp~~~~~~~~~~~~l~---~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~~ 84 (177)
T 2esr_A 12 RPTSDKVRGAIFNMIG---PYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAE----NRFT 84 (177)
T ss_dssp ------CHHHHHHHHC---SCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCG----GGEE
T ss_pred CcCHHHHHHHHHHHHH---hhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCC----CceE
Confidence 3444445555544321 13468899999999999999998876 48999999 88999999999988764 3677
Q ss_pred EEEEecCCCCCCCcCCCCCcEEEEccccCCCCcHHHHHHHHH--HhhCCCcEEEEEEeeeC
Q 023543 178 VTELTWGDDPDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLL--QLCGTQTTIFLAGELRN 236 (281)
Q Consensus 178 ~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~--~ll~~~g~~~l~~~~r~ 236 (281)
+...|+.+.. .....+||+|++..+ |.....+.+++.+. ++|+|||.+++....+.
T Consensus 85 ~~~~d~~~~~--~~~~~~fD~i~~~~~-~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 85 LLKMEAERAI--DCLTGRFDLVFLDPP-YAKETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp EECSCHHHHH--HHBCSCEEEEEECCS-SHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred EEECcHHHhH--HhhcCCCCEEEECCC-CCcchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 7765553311 112356999997654 44455677788887 88999999998876544
No 98
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.43 E-value=4.4e-13 Score=114.61 Aligned_cols=121 Identities=10% Similarity=-0.064 Sum_probs=86.8
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.+.+|||||||+|..++.+|+. +.+|+++|+ +.+++.+++|+..++.. ++.+...|..+..+..+.+.+||.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-----nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-----NLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-----SEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-----cEEEEECCHHHHHHHHcCCCChhe
Confidence 5679999999999999999875 457999999 88999999999998765 677776553221111134578999
Q ss_pred EEEc--cccCCCCcH------HHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhc
Q 023543 199 VLGS--DVIYSEGAV------GDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMK 249 (281)
Q Consensus 199 Iia~--d~iy~~~~~------~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~ 249 (281)
|++. +..+..... +.+++.+.++|+|||.++++..... -.+...+.+..
T Consensus 109 v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~--~~~~~~~~~~~ 165 (218)
T 3dxy_A 109 VQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEP--YAEHMLEVMSS 165 (218)
T ss_dssp EEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHH--HHHHHHHHHHT
T ss_pred EEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHH--HHHHHHHHHHh
Confidence 9987 444332222 3699999999999999988765332 22334444443
No 99
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.42 E-value=1.5e-13 Score=122.43 Aligned_cols=114 Identities=15% Similarity=0.205 Sum_probs=84.9
Q ss_pred ccCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcC---------------------------
Q 023543 120 LLHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRH--------------------------- 169 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~--------------------------- 169 (281)
.+++++|||||||+|..++.+++. +.+|+++|+ +.+++.+++|+..++..
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 467899999999999999999986 679999999 88999999987765421
Q ss_pred --------------------------CCCCCceEEEEEecCCCCCC--CcCCCCCcEEEEccccCCC------CcHHHHH
Q 023543 170 --------------------------GDLRGSAVVTELTWGDDPDQ--DLIQPLPDYVLGSDVIYSE------GAVGDLL 215 (281)
Q Consensus 170 --------------------------~~~~~~i~~~~l~w~~~~~~--~~~~~~fD~Iia~d~iy~~------~~~~~ll 215 (281)
.....++.+...|+...... .....+||+|++..++.+. .....++
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 00114688888776543211 1245789999999987443 3788899
Q ss_pred HHHHHhhCCCcEEEEEEe
Q 023543 216 DTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 216 ~~l~~ll~~~g~~~l~~~ 233 (281)
+.+.++|+|||.+++..+
T Consensus 204 ~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHEEEEEEEEEECC
T ss_pred HHHHHHhCCCcEEEEecC
Confidence 999999999999988643
No 100
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.42 E-value=1e-12 Score=119.05 Aligned_cols=103 Identities=22% Similarity=0.268 Sum_probs=84.8
Q ss_pred ccCCCeEEEECCCcCHHHHHHHHcCC-EEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 120 LLHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
..++++|||+|||+|.+++.+++.|+ +|+++|++.+++.+++|+..|+.. +++.+...+..+ ..+...+||+
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~----~~i~~~~~d~~~---~~~~~~~~D~ 108 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFS----DKITLLRGKLED---VHLPFPKVDI 108 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCT----TTEEEEESCTTT---SCCSSSCEEE
T ss_pred hcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCC----CCEEEEECchhh---ccCCCCcccE
Confidence 35788999999999999999999886 899999976899999999999875 568887765433 2234468999
Q ss_pred EEEccc---cCCCCcHHHHHHHHHHhhCCCcEEE
Q 023543 199 VLGSDV---IYSEGAVGDLLDTLLQLCGTQTTIF 229 (281)
Q Consensus 199 Iia~d~---iy~~~~~~~ll~~l~~ll~~~g~~~ 229 (281)
|++..+ +.+...++.++..+.++|+|||.++
T Consensus 109 Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 109 IISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp EEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred EEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 998754 3456778999999999999999986
No 101
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.42 E-value=1.6e-12 Score=113.04 Aligned_cols=129 Identities=14% Similarity=0.080 Sum_probs=96.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++++|||||||+|..++.+++. +.+|+++|+ +++++.+++|+..++.. .++.+...+..+.........+|
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~----~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD----QRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHHTCCSCCCC
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHhcCCCCCe
Confidence 46789999999999999999985 679999999 88999999999998875 57888876643211111112489
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC------------hhHHHHHHHHHhc--CCeEEEE
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN------------DSVLEYFLEAAMK--DFVIGRV 256 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~------------~~~~~~fl~~~~~--~f~v~~i 256 (281)
|+|++.. .......+++.+.++|+|||.+++...... ...++.|.+.+.. .|....+
T Consensus 138 D~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 208 (248)
T 3tfw_A 138 DLIFIDA---DKPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATAL 208 (248)
T ss_dssp SEEEECS---CGGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred EEEEECC---chHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEe
Confidence 9999743 355678899999999999999887765433 1235667777664 5666555
No 102
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.42 E-value=2.4e-11 Score=114.01 Aligned_cols=162 Identities=15% Similarity=0.117 Sum_probs=110.2
Q ss_pred EEEEeCCCCCCCCCCcCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHH
Q 023543 80 LSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRL 158 (281)
Q Consensus 80 l~i~q~~~~~~~~g~tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~ 158 (281)
+++..+++++.... -+.+..+.+++...+. ..++.+|||||||+|.+++.+|..+.+|+++|+ +++++.
T Consensus 254 ~~~~~~~~~f~q~n------~~~~e~l~~~~~~~l~----~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~ 323 (433)
T 1uwv_A 254 LRLTFSPRDFIQVN------AGVNQKMVARALEWLD----VQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEK 323 (433)
T ss_dssp EEEECCSSSCCCSB------HHHHHHHHHHHHHHHT----CCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHH
T ss_pred EEEEECcccccccC------HHHHHHHHHHHHHhhc----CCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHH
Confidence 45555665543221 2235556666655432 245789999999999999999999889999999 889999
Q ss_pred HHHHHHHhhcCCCCCCceEEEEEecCCCCCC-CcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeCh
Q 023543 159 LKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRND 237 (281)
Q Consensus 159 ~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~ 237 (281)
+++|+..|+.. ++.+...|+.+.... .+.+.+||+|++ |.-|... ..+++.+.+ ++|++++|+++. +
T Consensus 324 A~~n~~~~~~~-----~v~f~~~d~~~~l~~~~~~~~~fD~Vv~-dPPr~g~--~~~~~~l~~-~~p~~ivyvsc~---p 391 (433)
T 1uwv_A 324 GQQNARLNGLQ-----NVTFYHENLEEDVTKQPWAKNGFDKVLL-DPARAGA--AGVMQQIIK-LEPIRIVYVSCN---P 391 (433)
T ss_dssp HHHHHHHTTCC-----SEEEEECCTTSCCSSSGGGTTCCSEEEE-CCCTTCC--HHHHHHHHH-HCCSEEEEEESC---H
T ss_pred HHHHHHHcCCC-----ceEEEECCHHHHhhhhhhhcCCCCEEEE-CCCCccH--HHHHHHHHh-cCCCeEEEEECC---h
Confidence 99999999865 688888777653322 234468999886 5555433 256666654 689999988864 3
Q ss_pred hHHHHHHHHHh-cCCeEEEEecCCCCC
Q 023543 238 SVLEYFLEAAM-KDFVIGRVEQTQWHP 263 (281)
Q Consensus 238 ~~~~~fl~~~~-~~f~v~~i~~~~~~~ 263 (281)
.++..-+..+. .||.+..+..-.+-|
T Consensus 392 ~tlard~~~l~~~Gy~~~~~~~~d~Fp 418 (433)
T 1uwv_A 392 ATLARDSEALLKAGYTIARLAMLDMFP 418 (433)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECCST
T ss_pred HHHHhhHHHHHHCCcEEEEEEEeccCC
Confidence 33333334444 589988875444433
No 103
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.42 E-value=9.9e-13 Score=113.15 Aligned_cols=100 Identities=15% Similarity=0.108 Sum_probs=79.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||||||+|..+..++..|.+|+++|+ +.+++.++++ +.+...+..+.. ..+.+.+||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-------------~~~~~~d~~~~~-~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK-------------FNVVKSDAIEYL-KSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT-------------SEEECSCHHHHH-HTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------------cceeeccHHHHh-hhcCCCCeeEE
Confidence 46789999999999999999999999999999 7889888866 122332221100 02345789999
Q ss_pred EEccccCCCC--cHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEG--AVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~--~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
++..++++.. ....+++.+.++|+|||.+++....
T Consensus 106 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 106 MISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9999999876 6799999999999999999887654
No 104
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.42 E-value=9.7e-13 Score=116.11 Aligned_cols=115 Identities=16% Similarity=0.105 Sum_probs=88.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC--EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~--~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.++++|||+|||+|.+++.+|+.+. +|+++|+ +.+++.+++|++.|++. ++.+...|..+. .. ..+||
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-----~~~~~~~d~~~~-~~---~~~~D 188 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-----NVIPILADNRDV-EL---KDVAD 188 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-----SEEEEESCGGGC-CC---TTCEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CEEEEECChHHc-Cc---cCCce
Confidence 4678999999999999999998754 8999999 89999999999999875 567777665433 21 46799
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeCh---hHHHHHHHHHh
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRND---SVLEYFLEAAM 248 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~---~~~~~fl~~~~ 248 (281)
+|++..+. ....++..+.+.|+|+|.+++++..... +.....++.+.
T Consensus 189 ~Vi~d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~ 238 (272)
T 3a27_A 189 RVIMGYVH----KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYA 238 (272)
T ss_dssp EEEECCCS----SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHH
T ss_pred EEEECCcc----cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHH
Confidence 99876543 5667888889999999999988876633 23334444444
No 105
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.41 E-value=6.8e-13 Score=113.03 Aligned_cols=130 Identities=17% Similarity=0.122 Sum_probs=91.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC---CcCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ---DLIQ 193 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~---~~~~ 193 (281)
.++++|||||||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. +++.+...+..+..+. ....
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~l~~~~~~~~~ 132 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ----DKVTILNGASQDLIPQLKKKYDV 132 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEESCHHHHGGGTTTTSCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC----CceEEEECCHHHHHHHHHHhcCC
Confidence 46789999999999999999873 679999999 88999999999999875 4688887664321111 1112
Q ss_pred CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh--cCCeEEEEe
Q 023543 194 PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM--KDFVIGRVE 257 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~--~~f~v~~i~ 257 (281)
.+||+|++.....+......++..+ ++|+|||.+++........ ..|.+.+. ..|....++
T Consensus 133 ~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~--~~~~~~l~~~~~~~~~~~~ 195 (221)
T 3u81_A 133 DTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPGT--PDFLAYVRGSSSFECTHYS 195 (221)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCCC--HHHHHHHHHCTTEEEEEEE
T ss_pred CceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcch--HHHHHHHhhCCCceEEEcc
Confidence 6899999765444333333556666 8999999988776554331 33555554 357666654
No 106
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.41 E-value=1.2e-12 Score=111.37 Aligned_cols=129 Identities=16% Similarity=0.120 Sum_probs=95.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcC---C
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLI---Q 193 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~---~ 193 (281)
.++++|||||||+|..++.+++. +.+|+++|+ +++++.+++|+..++.. +++.+...+..+... .+. .
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~-~~~~~~~ 131 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN----DRVEVRTGLALDSLQ-QIENEKY 131 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHH-HHHHTTC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHH-HHHhcCC
Confidence 46789999999999999999986 779999999 88999999999998775 468887765432111 011 1
Q ss_pred CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeCh------------hHHHHHHHHHhc--CCeEEEEe
Q 023543 194 PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRND------------SVLEYFLEAAMK--DFVIGRVE 257 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~------------~~~~~fl~~~~~--~f~v~~i~ 257 (281)
.+||+|+.... ......+++.+.++|+|||.+++....... ..++.|.+.+.. .|....++
T Consensus 132 ~~fD~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p 206 (223)
T 3duw_A 132 EPFDFIFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQ 206 (223)
T ss_dssp CCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CCcCEEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEe
Confidence 57999986533 456788999999999999988776544331 235667777763 56655554
No 107
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.41 E-value=1.1e-12 Score=110.39 Aligned_cols=100 Identities=13% Similarity=0.047 Sum_probs=82.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|..++.+++.+.+|+++|+ +.+++.+++|+..++.. ++.+...|+.+.. ....+||+|
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~---~~~~~~D~i 147 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLH-----NVSTRHGDGWQGW---QARAPFDAI 147 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCGGGCC---GGGCCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCC-----ceEEEECCcccCC---ccCCCccEE
Confidence 56889999999999999999999999999999 88999999999988764 6777776654322 234689999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
++..++++... .+.++|+|||.+++....
T Consensus 148 ~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 148 IVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred EEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 99988866432 578899999999888765
No 108
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.41 E-value=1e-12 Score=116.26 Aligned_cols=104 Identities=14% Similarity=0.107 Sum_probs=87.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++++|||+|||+|..++.++.. +++|+++|+ +.+++.+++++..++. ++.+...|..+. .+ ..+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~------~v~~~~~d~~~~---~~-~~~f 90 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY------DSEFLEGDATEI---EL-NDKY 90 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS------EEEEEESCTTTC---CC-SSCE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC------ceEEEEcchhhc---Cc-CCCe
Confidence 46789999999999999999875 579999999 8899999999877542 577777665432 22 3589
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
|+|++..++++..+.+.+++.+.++|+|||.+++....
T Consensus 91 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 91 DIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred eEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 99999999999999999999999999999999887654
No 109
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.41 E-value=1.2e-13 Score=111.94 Aligned_cols=107 Identities=21% Similarity=0.150 Sum_probs=82.0
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-CcCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DLIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~~~~~fD~I 199 (281)
++++|||+|||+|..++.+++.+++|+++|+ +.+++.+++|+..++. ++.+...|+.+.... ...+.+||+|
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~~D~i 114 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGL------GARVVALPVEVFLPEAKAQGERFTVA 114 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTC------CCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCC------ceEEEeccHHHHHHhhhccCCceEEE
Confidence 7889999999999999999999999999999 8899999999998864 355565444321100 0012379999
Q ss_pred EEccccCCCCcHHHHHHHHH--HhhCCCcEEEEEEeeeC
Q 023543 200 LGSDVIYSEGAVGDLLDTLL--QLCGTQTTIFLAGELRN 236 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~--~ll~~~g~~~l~~~~r~ 236 (281)
++..+.+ ...+.+++.+. ++|+|+|.++++.....
T Consensus 115 ~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 115 FMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp EECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred EECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 9876644 56677777777 89999999988876544
No 110
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.41 E-value=1e-12 Score=113.88 Aligned_cols=100 Identities=11% Similarity=-0.059 Sum_probs=84.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.++.+|||+|||+|..+..++.. +.+|+++|+ +.+++.++++ . .++.+...|..+.. .+.+||
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~-----~~~~~~~~d~~~~~----~~~~fD 97 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----L-----PNTNFGKADLATWK----PAQKAD 97 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----S-----TTSEEEECCTTTCC----CSSCEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----C-----CCcEEEECChhhcC----ccCCcC
Confidence 46789999999999999998886 789999999 8899999877 1 25667776654322 356899
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
+|+++.++++..+...+++.+.++|+|||.+++....
T Consensus 98 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 98 LLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp EEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred EEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 9999999999989999999999999999999888653
No 111
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.40 E-value=7.2e-13 Score=114.18 Aligned_cols=108 Identities=13% Similarity=0.012 Sum_probs=84.8
Q ss_pred ccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-Cc-CCCCC
Q 023543 120 LLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DL-IQPLP 196 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~-~~~~f 196 (281)
..++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.++++... .++.+...|..+.... .+ .+.+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTA--------ANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCC--------TTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcc--------cCceEEECcccccccccccccccCc
Confidence 356789999999999999999999889999999 8899999987621 2577777654321100 00 01359
Q ss_pred cEEEEccccCCCC--cHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 197 DYVLGSDVIYSEG--AVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 197 D~Iia~d~iy~~~--~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
|+|++..++++.. ....+++.+.++|+|||.+++.....
T Consensus 126 d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp CEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred cEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 9999999999976 88999999999999999988876543
No 112
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.40 E-value=2.6e-12 Score=114.13 Aligned_cols=122 Identities=14% Similarity=0.163 Sum_probs=89.9
Q ss_pred chHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc-CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEE
Q 023543 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (281)
Q Consensus 101 ~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~-g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~ 178 (281)
+.+..+.+++..... ..++.+|||+|||+|.+++.+++. +.+|+++|+ +++++.+++|+..++.. +++.+
T Consensus 106 ~~te~lv~~~l~~~~----~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~----~~v~~ 177 (284)
T 1nv8_A 106 PETEELVELALELIR----KYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVS----DRFFV 177 (284)
T ss_dssp TTHHHHHHHHHHHHH----HHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCT----TSEEE
T ss_pred hhHHHHHHHHHHHhc----ccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CceEE
Confidence 446666776655422 125679999999999999999987 779999999 88999999999999875 46888
Q ss_pred EEEecCCCCCCCcCCCCC---cEEEEccc------------cCCCCc-------HHHHHHHHH-HhhCCCcEEEEEEeee
Q 023543 179 TELTWGDDPDQDLIQPLP---DYVLGSDV------------IYSEGA-------VGDLLDTLL-QLCGTQTTIFLAGELR 235 (281)
Q Consensus 179 ~~l~w~~~~~~~~~~~~f---D~Iia~d~------------iy~~~~-------~~~ll~~l~-~ll~~~g~~~l~~~~r 235 (281)
...||.+.. ..+| |+|+++.. .|.+.. -..+++.+. +.++|||.+++.....
T Consensus 178 ~~~D~~~~~-----~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~ 252 (284)
T 1nv8_A 178 RKGEFLEPF-----KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED 252 (284)
T ss_dssp EESSTTGGG-----GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT
T ss_pred EECcchhhc-----ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 887775422 1468 99998622 211111 126788888 9999999988765443
No 113
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.40 E-value=1.3e-12 Score=109.64 Aligned_cols=115 Identities=15% Similarity=0.089 Sum_probs=88.0
Q ss_pred HHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEe
Q 023543 105 VLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELT 182 (281)
Q Consensus 105 ~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~ 182 (281)
.+.+++... ..++.+|||+|||+|..++.+++.|. +|+++|+ +.+++.+++|+... .++.+...+
T Consensus 31 ~~~~~l~~~------~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~-------~~i~~~~~d 97 (215)
T 2pxx_A 31 SFRALLEPE------LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV-------PQLRWETMD 97 (215)
T ss_dssp HHHHHHGGG------CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC-------TTCEEEECC
T ss_pred HHHHHHHHh------cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC-------CCcEEEEcc
Confidence 456666553 34678999999999999999999887 7999999 88999999887541 356777765
Q ss_pred cCCCCCCCcCCCCCcEEEEccccCC---------------CCcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 183 WGDDPDQDLIQPLPDYVLGSDVIYS---------------EGAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 183 w~~~~~~~~~~~~fD~Iia~d~iy~---------------~~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
..+. .+.+.+||+|++..++.. ......+++.+.++|+|||.+++.....
T Consensus 98 ~~~~---~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 98 VRKL---DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp TTSC---CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhcC---CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 5432 344568999999777633 2356889999999999999998877644
No 114
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.40 E-value=9.1e-13 Score=116.36 Aligned_cols=107 Identities=9% Similarity=-0.020 Sum_probs=87.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCc-CCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL-IQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~-~~~~fD 197 (281)
.++.+|||+|||+|..+..+++.+. +|+++|+ +.+++.+++++..++.. .++.+...+..+. .+ .+.+||
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~---~~~~~~~fD 135 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRR----FKVFFRAQDSYGR---HMDLGKEFD 135 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCS----SEEEEEESCTTTS---CCCCSSCEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCC----ccEEEEECCcccc---ccCCCCCcC
Confidence 4678999999999998888888776 8999999 88999999998877653 3677777665432 22 356899
Q ss_pred EEEEccccCC----CCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 198 YVLGSDVIYS----EGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 198 ~Iia~d~iy~----~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
+|++..++++ ......+++.+.++|+|||.+++....
T Consensus 136 ~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 136 VISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp EEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 9999999865 466788999999999999999888654
No 115
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.40 E-value=3.1e-12 Score=112.76 Aligned_cols=121 Identities=11% Similarity=0.035 Sum_probs=92.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHh-hcCCCCCCceEEEEEecCCCCCCCcCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENN-LRHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n-~~~~~~~~~i~~~~l~w~~~~~~~~~~~~ 195 (281)
.++.+|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..+ +.. ++.+...|+.+ .+.+.+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~-----~v~~~~~d~~~----~~~~~~ 179 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIG-----NVRTSRSDIAD----FISDQM 179 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCT-----TEEEECSCTTT----CCCSCC
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCC-----cEEEEECchhc----cCcCCC
Confidence 46789999999999999998876 679999999 88999999999988 643 67777766543 233468
Q ss_pred CcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEe
Q 023543 196 PDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVE 257 (281)
Q Consensus 196 fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~ 257 (281)
||+|++ +......+++.+.++|+|||.++++..... ..+.+.+.+. .||....+.
T Consensus 180 fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~--~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 180 YDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNFD--QSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp EEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSHH--HHHHHHHHSGGGTEEEEEEE
T ss_pred ccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHHCCCeEEEEE
Confidence 999998 334557899999999999999988876442 3345556555 478755553
No 116
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.40 E-value=1.4e-12 Score=129.42 Aligned_cols=149 Identities=16% Similarity=0.107 Sum_probs=108.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.+|++|||+|||+|.+++.+++.|+ +|+++|+ +.+++.+++|++.|++. ..++.+...|..+... ....+||+
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~---~~~v~~i~~D~~~~l~--~~~~~fD~ 612 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT---GRAHRLIQADCLAWLR--EANEQFDL 612 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC---STTEEEEESCHHHHHH--HCCCCEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC---ccceEEEecCHHHHHH--hcCCCccE
Confidence 5789999999999999999999887 5999999 88999999999999875 1367777755432111 12468999
Q ss_pred EEEccccCC-----------CCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhcCCeEEEEecCCCCCCCC-
Q 023543 199 VLGSDVIYS-----------EGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMKDFVIGRVEQTQWHPDYC- 266 (281)
Q Consensus 199 Iia~d~iy~-----------~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~~f~v~~i~~~~~~~~~~- 266 (281)
|++....+. ...+..++..+.++|+|||.+++++..+........+. ..+|.+..+....+.++|.
T Consensus 613 Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~--~~g~~~~~i~~~~lp~df~~ 690 (703)
T 3v97_A 613 IFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLA--KLGLKAQEITQKTLSQDFAR 690 (703)
T ss_dssp EEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHH--HTTEEEEECTTTTCCGGGTT
T ss_pred EEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHH--HcCCceeeeeeccCCCCCCC
Confidence 997544332 23577889999999999999998887644322122222 2478888888888888885
Q ss_pred CCcEE-EEEEE
Q 023543 267 SPRVV-VYILV 276 (281)
Q Consensus 267 ~~~~~-i~~~~ 276 (281)
.+.++ +|.++
T Consensus 691 ~~~ih~~w~i~ 701 (703)
T 3v97_A 691 NRQIHNCWLIT 701 (703)
T ss_dssp CSSCCEEEEEE
T ss_pred CCcceEEEEEe
Confidence 34443 55554
No 117
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.39 E-value=2.3e-12 Score=112.83 Aligned_cols=109 Identities=17% Similarity=0.110 Sum_probs=87.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-C--CEEEEEec-hh------HHHHHHHHHHHhhcCCCCCCceEEEEEe-cCCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PD------RLRLLKKNIENNLRHGDLRGSAVVTELT-WGDDPDQ 189 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-g--~~V~~tD~-~~------~l~~~~~N~~~n~~~~~~~~~i~~~~l~-w~~~~~~ 189 (281)
.++++|||+|||+|..++.++.. | .+|+++|+ +. +++.+++++..++.. .++.+...+ +. ....
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~-~~~~ 116 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG----DRLTVHFNTNLS-DDLG 116 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG----GGEEEECSCCTT-TCCG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC----CceEEEECChhh-hccC
Confidence 46889999999999999998886 4 68999999 65 899999999887653 367777654 21 1122
Q ss_pred CcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 190 DLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 190 ~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
.+.+.+||+|++..++++......+++.+.++++|||.+++....
T Consensus 117 ~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 117 PIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp GGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred CCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 234578999999999999888888999999999999999887543
No 118
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.39 E-value=1.2e-11 Score=111.63 Aligned_cols=104 Identities=14% Similarity=0.075 Sum_probs=86.5
Q ss_pred CCCeEEEECCCcCHHHHHHHH--cCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAAL--LGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~--~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
++.+|||+|||+|..+..+++ .+.+++++|++.+++.+++++...++. .++.+...|..+. ++. +||+|
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~----~p~-~~D~v 239 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLS----GRAQVVVGSFFDP----LPA-GAGGY 239 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCT----TTEEEEECCTTSC----CCC-SCSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcC----cCeEEecCCCCCC----CCC-CCcEE
Confidence 457999999999999988887 356899999988999999999887764 5788888765421 222 79999
Q ss_pred EEccccCCCCc--HHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGA--VGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~--~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
++..++++..+ ...+++.+++.|+|||.+++....
T Consensus 240 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 276 (332)
T 3i53_A 240 VLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAV 276 (332)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred EEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeec
Confidence 99999988666 589999999999999999987654
No 119
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.39 E-value=5.6e-13 Score=114.62 Aligned_cols=105 Identities=10% Similarity=0.097 Sum_probs=79.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||||||+|..+..++..+. +|+++|+ +.+++.+++++..++ .++.+...++.+.. ..+.+.+||+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~-~~~~~~~fD~ 131 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVA-PTLPDGHFDG 131 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHG-GGSCTTCEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC------CCeEEEecCHHHhh-cccCCCceEE
Confidence 3678999999999999999988665 7999999 889999999887654 25777776654321 1244578999
Q ss_pred EEE-ccccC----CCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 199 VLG-SDVIY----SEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 199 Iia-~d~iy----~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
|++ ...+. +....+.+++.+.++|||||.+++..
T Consensus 132 V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 998 43321 23345578999999999999988764
No 120
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.39 E-value=1.3e-12 Score=116.76 Aligned_cols=105 Identities=12% Similarity=-0.006 Sum_probs=85.6
Q ss_pred cCCCeEEEECCCcCHHHHHHH--H-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAA--L-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a--~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++.+|||+|||+|..++.++ . .+.+|+++|+ +.+++.+++|+..++.. +++.+...|+.+. .+. .+|
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~---~~~-~~f 188 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA----GQITLHRQDAWKL---DTR-EGY 188 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG----GGEEEEECCGGGC---CCC-SCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC----CceEEEECchhcC---Ccc-CCe
Confidence 568899999999999998875 2 4668999999 88999999999887765 4688888776542 223 789
Q ss_pred cEEEEccccCCCCcHH---HHHHHHHHhhCCCcEEEEEEe
Q 023543 197 DYVLGSDVIYSEGAVG---DLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~---~ll~~l~~ll~~~g~~~l~~~ 233 (281)
|+|++..++++..... .+++.+.++|+|||.++++..
T Consensus 189 D~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 189 DLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp EEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 9999999888765544 489999999999999998873
No 121
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.39 E-value=2.3e-12 Score=110.73 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=83.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHH--cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAAL--LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~--~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.++++|||+|||+|..++.+++ .+.+|+++|+ +++++.+++|+..+++. .++.+...+..+.... ..+.+||
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~-~~~~~fD 144 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFE----NQVRIIEGNALEQFEN-VNDKVYD 144 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCT----TTEEEEESCGGGCHHH-HTTSCEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECCHHHHHHh-hccCCcc
Confidence 4678999999999999999998 5679999999 88999999999998765 4788887665332110 1157899
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
+|++.. .......+++.+.++|+|||.+++..
T Consensus 145 ~V~~~~---~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 145 MIFIDA---AKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EEEEET---TSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEEEcC---cHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 999643 35668889999999999999987743
No 122
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.39 E-value=1.3e-11 Score=113.32 Aligned_cols=106 Identities=11% Similarity=0.077 Sum_probs=87.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..++.+++. +.+++++|++.+++.+++++...++. +++.+...|..+. ++. +||+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~----~~v~~~~~d~~~~----~p~-~~D~ 271 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLA----DRCEILPGDFFET----IPD-GADV 271 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCT----TTEEEEECCTTTC----CCS-SCSE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcC----CceEEeccCCCCC----CCC-CceE
Confidence 35689999999999999988875 55899999988999999999887765 5788888776421 222 7999
Q ss_pred EEEccccCCCCcHH--HHHHHHHHhhCCCcEEEEEEeee
Q 023543 199 VLGSDVIYSEGAVG--DLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 199 Iia~d~iy~~~~~~--~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
|++..++++..+.. .+++.+.+.|+|||.+++.....
T Consensus 272 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 272 YLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLI 310 (369)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBC
T ss_pred EEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 99999998876654 79999999999999999887554
No 123
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=1.2e-12 Score=114.26 Aligned_cols=110 Identities=15% Similarity=0.023 Sum_probs=86.0
Q ss_pred HHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEec
Q 023543 105 VLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTW 183 (281)
Q Consensus 105 ~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w 183 (281)
.+++++...+. ..++.+|||+|||+|..++.++..+.+|+++|+ +.+++.++++. ++.+...++
T Consensus 21 ~~~~~l~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~d~ 85 (261)
T 3ege_A 21 RIVNAIINLLN----LPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP-----------QVEWFTGYA 85 (261)
T ss_dssp HHHHHHHHHHC----CCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT-----------TEEEECCCT
T ss_pred HHHHHHHHHhC----CCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc-----------CCEEEECch
Confidence 45555554432 246789999999999999999999999999999 77877665443 466666555
Q ss_pred CCCCCCCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 184 GDDPDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 184 ~~~~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
.+ ..+.+.+||+|++..++++..+...+++.+.++|+ ||.+++...
T Consensus 86 ~~---~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 86 EN---LALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp TS---CCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred hh---CCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 33 23456789999999999999999999999999999 997666554
No 124
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.38 E-value=7.1e-12 Score=114.79 Aligned_cols=104 Identities=15% Similarity=0.103 Sum_probs=85.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..++.+++. +.+++++|++.+++.+++|+..+++. .++.+...|+.+. ++ ..||+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~----~~-~~~D~ 251 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLA----DRVTVAEGDFFKP----LP-VTADV 251 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCT----TTEEEEECCTTSC----CS-CCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCC----CceEEEeCCCCCc----CC-CCCCE
Confidence 35789999999999999988875 46899999988899999999988764 4788888765432 22 24999
Q ss_pred EEEccccCCCCcH--HHHHHHHHHhhCCCcEEEEEEe
Q 023543 199 VLGSDVIYSEGAV--GDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 199 Iia~d~iy~~~~~--~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
|++..++++.... ..+++.+.++|+|||.+++...
T Consensus 252 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 252 VLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9999999876654 4899999999999999888765
No 125
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.37 E-value=1.8e-12 Score=110.82 Aligned_cols=116 Identities=16% Similarity=0.122 Sum_probs=86.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcC-CCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLI-QPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~-~~~fD~ 198 (281)
.++++|||+|||+|..+..+++.+++|+++|+ +.+++.+++| . .++.+...|+.+..+ +. +.+||+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~-----~~~~~~~~d~~~~~~--~~~~~~fD~ 114 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN-----A-----PHADVYEWNGKGELP--AGLGAPFGL 114 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH-----C-----TTSEEEECCSCSSCC--TTCCCCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh-----C-----CCceEEEcchhhccC--CcCCCCEEE
Confidence 46789999999999999999999999999999 8899999988 1 257778877643322 33 578999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEe
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVE 257 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~ 257 (281)
|+++. ....+++.+.++|+|||.++......+... +.+.+. .||....+.
T Consensus 115 v~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 115 IVSRR------GPTSVILRLPELAAPDAHFLYVGPRLNVPE---VPERLAAVGWDIVAED 165 (226)
T ss_dssp EEEES------CCSGGGGGHHHHEEEEEEEEEEESSSCCTH---HHHHHHHTTCEEEEEE
T ss_pred EEeCC------CHHHHHHHHHHHcCCCcEEEEeCCcCCHHH---HHHHHHHCCCeEEEEE
Confidence 99973 457788999999999999883333333333 333344 488766654
No 126
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.37 E-value=5.5e-12 Score=112.27 Aligned_cols=101 Identities=19% Similarity=0.176 Sum_probs=81.7
Q ss_pred ccCCCeEEEECCCcC-HHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 120 LLHGKKIVELGSGCG-LVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 120 ~~~~~~VLELGcGtG-~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
..++.+|||+|||+| ..++.+|+ .|++|+++|+ +++++.|++|++..+.. ++.+...|..+ +.+.+|
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~-----~v~~v~gDa~~-----l~d~~F 189 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVD-----GVNVITGDETV-----IDGLEF 189 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCC-----SEEEEESCGGG-----GGGCCC
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCC-----CeEEEECchhh-----CCCCCc
Confidence 357899999999997 45577776 6899999999 89999999999988763 67777754322 335789
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
|+|+.+.. ......+++.+.+.|+|||++++...
T Consensus 190 DvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 190 DVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp SEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 99998655 46788999999999999999887653
No 127
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=3e-12 Score=112.63 Aligned_cols=101 Identities=16% Similarity=0.089 Sum_probs=83.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|..+..++..+.+|+++|+ +.+++.++++. .++.+...+..+. .+ ..+||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~---~~-~~~fD~v 121 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY----------PHLHFDVADARNF---RV-DKPLDAV 121 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----------TTSCEEECCTTTC---CC-SSCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC----------CCCEEEECChhhC---Cc-CCCcCEE
Confidence 46789999999999999999998999999999 88999988764 1345566554432 12 4689999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
++..++++..+...+++.+.++|+|||.+++.....
T Consensus 122 ~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 122 FSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 999999998899999999999999999998876643
No 128
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.37 E-value=4.9e-12 Score=107.36 Aligned_cols=120 Identities=17% Similarity=0.079 Sum_probs=89.5
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVL 200 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Ii 200 (281)
++++|||+|||+|..+..++.. +++|+ +.+++.++++ ++.+...+..+ ..+...+||+|+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~------------~~~~~~~d~~~---~~~~~~~fD~v~ 107 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR------------GVFVLKGTAEN---LPLKDESFDFAL 107 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT------------TCEEEECBTTB---CCSCTTCEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc------------CCEEEEccccc---CCCCCCCeeEEE
Confidence 4889999999999988887765 99999 8889988876 13445544332 223456899999
Q ss_pred EccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChh---------------------HHHHHHHHHh-cCCeEEEEec
Q 023543 201 GSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDS---------------------VLEYFLEAAM-KDFVIGRVEQ 258 (281)
Q Consensus 201 a~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~---------------------~~~~fl~~~~-~~f~v~~i~~ 258 (281)
+..++++......+++.+.++|+|||.++++...+... ..+.+.+.+. .||.+..+..
T Consensus 108 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 108 MVTTICFVDDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp EESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred EcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEec
Confidence 99999998889999999999999999999886543211 1233444454 4899877755
Q ss_pred CC
Q 023543 259 TQ 260 (281)
Q Consensus 259 ~~ 260 (281)
..
T Consensus 188 ~~ 189 (219)
T 1vlm_A 188 TL 189 (219)
T ss_dssp EC
T ss_pred cc
Confidence 43
No 129
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.37 E-value=9.7e-12 Score=113.97 Aligned_cols=107 Identities=18% Similarity=0.216 Sum_probs=86.1
Q ss_pred CCCeEEEECCCcCHHHHHHHH--cCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAAL--LGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~--~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
..++|||||||+|..++.+++ .+.+|+++|++.+++.+++++...+.. +++.+...|..+.. ..++ .+||+|
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~-~~~p-~~~D~v 252 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGS----ERIHGHGANLLDRD-VPFP-TGFDAV 252 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTG----GGEEEEECCCCSSS-CCCC-CCCSEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcc----cceEEEEccccccC-CCCC-CCcCEE
Confidence 568999999999999998887 466899999988999999998877654 47888886654321 0122 579999
Q ss_pred EEccccCCCCc--HHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGA--VGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~--~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
++..++++..+ ...+++.+.+.|+|||.+++....
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 253 WMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp EEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred EEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeec
Confidence 99999987544 468899999999999999887643
No 130
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.37 E-value=2.5e-12 Score=111.02 Aligned_cols=158 Identities=18% Similarity=0.182 Sum_probs=100.0
Q ss_pred chHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEE
Q 023543 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (281)
Q Consensus 101 ~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~ 178 (281)
.++..|.+.|... ....++++|||||||+|.++..+++.|+ +|+++|+ +.|++.+++|........ ..++
T Consensus 20 rg~~kL~~~L~~~----~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~--~~~~-- 91 (232)
T 3opn_A 20 RGGLKLEKALKEF----HLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVME--QFNF-- 91 (232)
T ss_dssp TTHHHHHHHHHHT----TCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEEC--SCCG--
T ss_pred CcHHHHHHHHHHc----CCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccc--cceE--
Confidence 3455666666543 1235688999999999999999999886 8999999 889888776533221100 0011
Q ss_pred EEEecCCCCCCCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee---------------eCh----hH
Q 023543 179 TELTWGDDPDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL---------------RND----SV 239 (281)
Q Consensus 179 ~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~---------------r~~----~~ 239 (281)
.+.. ...+..+.||.+ ..|+++.. +..+++.+.++|+|||.+++.... ++. ..
T Consensus 92 ---~~~~--~~~~~~~~~d~~-~~D~v~~~--l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~ 163 (232)
T 3opn_A 92 ---RNAV--LADFEQGRPSFT-SIDVSFIS--LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMT 163 (232)
T ss_dssp ---GGCC--GGGCCSCCCSEE-EECCSSSC--GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHH
T ss_pred ---EEeC--HhHcCcCCCCEE-EEEEEhhh--HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHH
Confidence 0000 011222235654 34555432 388999999999999998876311 111 13
Q ss_pred HHHHHHHHh-cCCeEEEEecCCCCCCCCCCcEEEEE
Q 023543 240 LEYFLEAAM-KDFVIGRVEQTQWHPDYCSPRVVVYI 274 (281)
Q Consensus 240 ~~~fl~~~~-~~f~v~~i~~~~~~~~~~~~~~~i~~ 274 (281)
.+.+.+.+. .||.+..+....+...+.+..+.+|.
T Consensus 164 ~~~l~~~l~~aGf~v~~~~~~pi~g~~gn~e~l~~~ 199 (232)
T 3opn_A 164 IEKVLKTATQLGFSVKGLTFSPIKGGAGNVEFLVHL 199 (232)
T ss_dssp HHHHHHHHHHHTEEEEEEEECSSCBTTTBCCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEccCCCCCCCHHHHHHH
Confidence 344555555 49999999887777667777776664
No 131
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.37 E-value=4.5e-12 Score=108.33 Aligned_cols=97 Identities=11% Similarity=0.036 Sum_probs=77.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||+|||+|..+..+++.+.+|+++|+ +.+++.++++. .++.+...+..+. .. +.+||+|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~---~~-~~~~D~v 104 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL----------PDATLHQGDMRDF---RL-GRKFSAV 104 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC----------TTCEEEECCTTTC---CC-SSCEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC----------CCCEEEECCHHHc---cc-CCCCcEE
Confidence 46789999999999999999988889999999 88999988763 1356666554332 22 5689999
Q ss_pred EE-ccccCCC---CcHHHHHHHHHHhhCCCcEEEEE
Q 023543 200 LG-SDVIYSE---GAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 200 ia-~d~iy~~---~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
++ .+++++. .....+++.+.++|+|||.+++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 105 VSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp EECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 95 5577664 56788999999999999998875
No 132
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.36 E-value=2.3e-12 Score=108.37 Aligned_cols=99 Identities=13% Similarity=-0.018 Sum_probs=81.0
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
++++|||+|||+|..+..+ +. +|+++|+ +.+++.++++. . ++.+...+..+ ..+.+.+||+|
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~-----~-----~~~~~~~d~~~---~~~~~~~fD~v 99 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA-----P-----EATWVRAWGEA---LPFPGESFDVV 99 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC-----T-----TSEEECCCTTS---CCSCSSCEEEE
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC-----C-----CcEEEEccccc---CCCCCCcEEEE
Confidence 7889999999999887766 77 9999999 88999998876 1 34455544332 22345689999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
++..++++......+++.+.++|+|||.++++...+.
T Consensus 100 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 100 LLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp EEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 9999999988999999999999999999999877654
No 133
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.36 E-value=2.6e-12 Score=109.25 Aligned_cols=130 Identities=15% Similarity=0.126 Sum_probs=95.4
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCc---CC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL---IQ 193 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~---~~ 193 (281)
.++++|||+|||+|..++.++.. +.+|+++|+ +++++.+++|+..++.. .++.+...+..+...... ..
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~ 138 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS----DKIGLRLSPAKDTLAELIHAGQA 138 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHHHHHTTTCT
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC----CceEEEeCCHHHHHHHhhhccCC
Confidence 46789999999999999999985 679999999 88999999999998875 468887765432111100 11
Q ss_pred CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC------------hhHHHHHHHHHhc--CCeEEEEe
Q 023543 194 PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN------------DSVLEYFLEAAMK--DFVIGRVE 257 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~------------~~~~~~fl~~~~~--~f~v~~i~ 257 (281)
.+||+|+... .......+++.+.++|+|||.+++...... ...++.|.+.+.. +|....++
T Consensus 139 ~~fD~v~~~~---~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 213 (225)
T 3tr6_A 139 WQYDLIYIDA---DKANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIP 213 (225)
T ss_dssp TCEEEEEECS---CGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred CCccEEEECC---CHHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 6899999533 245678899999999999999988754422 1245667776664 56665554
No 134
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.35 E-value=3.6e-13 Score=116.33 Aligned_cols=105 Identities=11% Similarity=0.133 Sum_probs=80.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC-CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g-~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.+|++|||||||+|..+..+++.. .+|+++|+ +.+++.++++...++. ++.+...+|.+.. ..+.+.+||.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~------~~~~~~~~a~~~~-~~~~~~~FD~ 131 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH------KVIPLKGLWEDVA-PTLPDGHFDG 131 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS------EEEEEESCHHHHG-GGSCTTCEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC------ceEEEeehHHhhc-ccccccCCce
Confidence 478899999999999999888764 57999999 8999999998877643 4666776664322 2345678998
Q ss_pred EEE-----ccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 199 VLG-----SDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 199 Iia-----~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
|+. .....+..+.+.+++.+.++|||||++++..
T Consensus 132 i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 864 3334445667889999999999999987754
No 135
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.35 E-value=2.5e-12 Score=111.07 Aligned_cols=102 Identities=16% Similarity=0.113 Sum_probs=80.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||+|||+|..++.+++.|.+|+++|+ +.+++.+++|+..++. ++.+...++.+.. ...+||+|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~------~v~~~~~d~~~~~----~~~~fD~v 109 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL------KIEFLQGDVLEIA----FKNEFDAV 109 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC------CCEEEESCGGGCC----CCSCEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCC------ceEEEECChhhcc----cCCCccEE
Confidence 35689999999999999999999999999999 8899999999987753 3666666554321 23579999
Q ss_pred EEcc-cc-C-CCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 200 LGSD-VI-Y-SEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 200 ia~d-~i-y-~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
++.. .+ | .......+++.+.++|+|||.+++..
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 110 TMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp EECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 9752 22 2 23567899999999999999988754
No 136
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.35 E-value=3.1e-13 Score=116.29 Aligned_cols=103 Identities=16% Similarity=-0.002 Sum_probs=83.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|..++.+++.|.+|+++|+ +.+++.+++|+..+++. .++.+...|+.+.. .+.+||+|
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~----~~~~~D~v 148 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIA----DKIEFICGDFLLLA----SFLKADVV 148 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHG----GGCCCSEE
T ss_pred cCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCC----cCeEEEECChHHhc----ccCCCCEE
Confidence 47899999999999999999999999999999 88999999999998764 36888886654322 34689999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
++..++++.......+..+.++|+|+|.+++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 149 FLSPPWGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp EECCCCSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred EECCCcCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 98888777666555666778889999875443
No 137
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.35 E-value=6.3e-12 Score=108.95 Aligned_cols=118 Identities=15% Similarity=0.084 Sum_probs=89.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++++|||+|||+|..++.++.. +.+|+++|+ +++++.+++|++.++.. +++.+...|+.+. +...+|
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~----~~~~~~ 163 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD----DRVTIKLKDIYEG----IEEENV 163 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT----TTEEEECSCGGGC----CCCCSE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC----CceEEEECchhhc----cCCCCc
Confidence 56889999999999999999886 678999999 88999999999999875 4588887666532 345679
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhc-C--CeE
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMK-D--FVI 253 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~-~--f~v 253 (281)
|+|++. ......+++.+.++|+|||.+++...... ..+.+.+.+.+ + |..
T Consensus 164 D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~g~~f~~ 216 (255)
T 3mb5_A 164 DHVILD-----LPQPERVVEHAAKALKPGGFFVAYTPCSN--QVMRLHEKLREFKDYFMK 216 (255)
T ss_dssp EEEEEC-----SSCGGGGHHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHHTGGGBSC
T ss_pred CEEEEC-----CCCHHHHHHHHHHHcCCCCEEEEEECCHH--HHHHHHHHHHHcCCCccc
Confidence 999973 34456789999999999999888765432 23334444443 5 643
No 138
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.35 E-value=2.7e-12 Score=113.62 Aligned_cols=125 Identities=16% Similarity=0.220 Sum_probs=90.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.+|.+|||+|||+|.+++.+|+.|+ +|+++|+ +.+++.+++|++.|++. +++.+.+.|..+. .....||.
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~----~~v~~~~~D~~~~----~~~~~~D~ 195 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE----DRMSAYNMDNRDF----PGENIADR 195 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT----TTEEEECSCTTTC----CCCSCEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEeCcHHHh----ccccCCCE
Confidence 4689999999999999999999885 8999999 89999999999999987 5788877553321 23467999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeCh----hHHHHHHHHHh-cCCeEEEEe
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRND----SVLEYFLEAAM-KDFVIGRVE 257 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~----~~~~~fl~~~~-~~f~v~~i~ 257 (281)
|+...+.+. ..++..+.++|++||.+.+....... ...+.+.+.+. .++.++.+.
T Consensus 196 Vi~~~p~~~----~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~~ 255 (278)
T 3k6r_A 196 ILMGYVVRT----HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLN 255 (278)
T ss_dssp EEECCCSSG----GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred EEECCCCcH----HHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEEEE
Confidence 987765443 34566677889999987654433221 22333333333 477776554
No 139
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.35 E-value=2.2e-11 Score=111.22 Aligned_cols=103 Identities=15% Similarity=0.194 Sum_probs=85.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++++|||+|||+|..+..+++. +.+++++|++.+++.+++|+..++.. +++.+...|..+. .+ +.+|+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~---~~--~~~D~ 259 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVA----DRMRGIAVDIYKE---SY--PEADA 259 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCT----TTEEEEECCTTTS---CC--CCCSE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCC----CCEEEEeCccccC---CC--CCCCE
Confidence 45789999999999999998875 55899999988999999999988765 4688888665432 12 34599
Q ss_pred EEEccccCCCCc--HHHHHHHHHHhhCCCcEEEEEE
Q 023543 199 VLGSDVIYSEGA--VGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 199 Iia~d~iy~~~~--~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
|++..++++..+ ...+++.+.+.|+|||.+++..
T Consensus 260 v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 260 VLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 999999988665 8899999999999999998876
No 140
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.35 E-value=1.4e-11 Score=114.23 Aligned_cols=106 Identities=17% Similarity=0.058 Sum_probs=78.5
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVL 200 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Ii 200 (281)
+|++|||+|||+|..++.+|+.|++|+++|+ +.+++.+++|++.|++. . .+...|..+... .. ...||+|+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~----~--~~~~~D~~~~l~-~~-~~~fD~Ii 285 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLR----V--DIRHGEALPTLR-GL-EGPFHHVL 285 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC----C--EEEESCHHHHHH-TC-CCCEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCC----C--cEEEccHHHHHH-Hh-cCCCCEEE
Confidence 4899999999999999999999999999999 88999999999999875 2 233333211110 11 23499998
Q ss_pred EccccCCC---------CcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 201 GSDVIYSE---------GAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 201 a~d~iy~~---------~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
+....+.. ..+..++..+.++|+|||.++++....
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 75443332 345788889999999999987555443
No 141
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.35 E-value=8.8e-13 Score=114.41 Aligned_cols=130 Identities=13% Similarity=0.088 Sum_probs=95.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCc---CC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL---IQ 193 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~---~~ 193 (281)
.++++|||||||+|..++.+|.. +.+|+++|+ +++++.+++|++.++.. .++.+...+..+...... ..
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~----~~i~~~~gda~~~l~~~~~~~~~ 134 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE----HKIKLRLGPALDTLHSLLNEGGE 134 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT----TTEEEEESCHHHHHHHHHHHHCS
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHHHhhccCC
Confidence 46789999999999999999973 679999999 88999999999998875 578887755422111000 03
Q ss_pred CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC------------hhHHHHHHHHHhc--CCeEEEEe
Q 023543 194 PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN------------DSVLEYFLEAAMK--DFVIGRVE 257 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~------------~~~~~~fl~~~~~--~f~v~~i~ 257 (281)
.+||+|++... ......+++.+.++|+|||.+++...... ...++.|.+.+.. .|....++
T Consensus 135 ~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 209 (242)
T 3r3h_A 135 HQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLA 209 (242)
T ss_dssp SCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEE
Confidence 68999987533 55678899999999999999988654322 1235677777764 56665554
No 142
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.34 E-value=1.3e-12 Score=121.03 Aligned_cols=112 Identities=17% Similarity=0.074 Sum_probs=84.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCC-ceEEEEEecCCCCCCC-cCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRG-SAVVTELTWGDDPDQD-LIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~-~i~~~~l~w~~~~~~~-~~~~~f 196 (281)
.++++|||+|||+|.+++.+|+.|+ +|+++|+ +.+++.+++|++.|++. . ++.+...|..+..... ..+.+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~----~~~v~~~~~D~~~~l~~~~~~~~~f 286 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLD----MANHQLVVMDVFDYFKYARRHHLTY 286 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCC----CTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECCHHHHHHHHHHhCCCc
Confidence 4678999999999999999999776 7999999 89999999999999875 3 6777775543211100 013579
Q ss_pred cEEEEccccCC---------CCcHHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 197 DYVLGSDVIYS---------EGAVGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 197 D~Iia~d~iy~---------~~~~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
|+|++....+. ...+..+++.+.++|+|||.+++++....
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 99987444321 12355678888999999999998876654
No 143
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.34 E-value=4.5e-12 Score=115.66 Aligned_cols=104 Identities=14% Similarity=0.169 Sum_probs=83.5
Q ss_pred ccCCCeEEEECCCcCHHHHHHHHcCC-EEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 120 LLHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
..++++|||||||+|.+++.+++.|+ +|+++|++++++.++++++.|+.. .++.+...++.+. .+ ..+||+
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~----~~v~~~~~d~~~~---~~-~~~~D~ 119 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLT----DRIVVIPGKVEEV---SL-PEQVDI 119 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCT----TTEEEEESCTTTC---CC-SSCEEE
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcchhhC---CC-CCceeE
Confidence 35789999999999999999999876 899999965889999999999875 4788888665432 12 257999
Q ss_pred EEEccccCC--CCcHHHHHHHHHHhhCCCcEEEEE
Q 023543 199 VLGSDVIYS--EGAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 199 Iia~d~iy~--~~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
|++..+.++ .......+..+.++|+|||.+++.
T Consensus 120 Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 120 IISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 999888775 345566677788999999998754
No 144
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.34 E-value=9e-11 Score=98.33 Aligned_cols=122 Identities=20% Similarity=0.237 Sum_probs=86.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++++|||+|||+|.+++.+++.|. +|+++|+ +.+++.+++|+..++. ++.+...|+.+. ..+||+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~~------~~~~D~ 115 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG------KFKVFIGDVSEF------NSRVDI 115 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT------SEEEEESCGGGC------CCCCSE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC------CEEEEECchHHc------CCCCCE
Confidence 4688999999999999999999876 7999999 8899999999988764 466666554331 248999
Q ss_pred EEEccccCCC--CcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEec
Q 023543 199 VLGSDVIYSE--GAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVEQ 258 (281)
Q Consensus 199 Iia~d~iy~~--~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~~ 258 (281)
|++..+.+.. .....+++.+.+++ |.+++.+. .+....+.+...+. .||.++.+..
T Consensus 116 v~~~~p~~~~~~~~~~~~l~~~~~~l---~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~~~ 174 (207)
T 1wy7_A 116 VIMNPPFGSQRKHADRPFLLKAFEIS---DVVYSIHL-AKPEVRRFIEKFSWEHGFVVTHRLT 174 (207)
T ss_dssp EEECCCCSSSSTTTTHHHHHHHHHHC---SEEEEEEE-CCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEcCCCccccCCchHHHHHHHHHhc---CcEEEEEe-CCcCCHHHHHHHHHHCCCeEEEEEE
Confidence 9987665443 34567788888877 44555542 23333333444444 4788776643
No 145
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.34 E-value=4.9e-12 Score=113.31 Aligned_cols=114 Identities=11% Similarity=-0.050 Sum_probs=77.8
Q ss_pred CCCeEEEECCCcCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCC-CCceEEEEEecCCCC-----CCCcCC
Q 023543 122 HGKKIVELGSGCGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDL-RGSAVVTELTWGDDP-----DQDLIQ 193 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~-~~~i~~~~l~w~~~~-----~~~~~~ 193 (281)
++.+|||||||+|.....++. .+++|+|+|+ +.|++.|++.....+..... .-++.+...+...+. ...+.+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 478999999999965444444 4579999999 88999999987665422000 001334443321111 011345
Q ss_pred CCCcEEEEccccCC---CCcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 194 PLPDYVLGSDVIYS---EGAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 194 ~~fD~Iia~d~iy~---~~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
.+||+|++..++++ ......+++.+.++|+|||.++++...+
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 68999999888753 3467899999999999999998887643
No 146
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.34 E-value=1.2e-11 Score=111.42 Aligned_cols=107 Identities=15% Similarity=0.099 Sum_probs=87.4
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..+..+++. +.+++++|++.+++.+++++..++.. +++.+...|+.+. .+. .+||+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~---~~~-~~~D~ 235 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVA----SRYHTIAGSAFEV---DYG-NDYDL 235 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCG----GGEEEEESCTTTS---CCC-SCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCC----cceEEEecccccC---CCC-CCCcE
Confidence 35689999999999999988875 67999999998899999999888765 4688888765432 222 34999
Q ss_pred EEEccccCCC--CcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 199 VLGSDVIYSE--GAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 199 Iia~d~iy~~--~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
|++..++++. .....+++.+.++|+|||.+++.....
T Consensus 236 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 236 VLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred EEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 9999999886 456899999999999999988876543
No 147
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.33 E-value=1.2e-11 Score=107.05 Aligned_cols=120 Identities=15% Similarity=0.063 Sum_probs=91.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHh-hcCCCCCCceEEEEEecCCCCCCCcCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENN-LRHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n-~~~~~~~~~i~~~~l~w~~~~~~~~~~~~ 195 (281)
.++.+|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..+ +. .++.+...|+.+. .+.+.+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~-----~~v~~~~~d~~~~---~~~~~~ 166 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV-----ENVRFHLGKLEEA---ELEEAA 166 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC-----CCEEEEESCGGGC---CCCTTC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-----CCEEEEECchhhc---CCCCCC
Confidence 56889999999999999999886 579999999 88999999999988 63 3677777665432 234467
Q ss_pred CcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEE
Q 023543 196 PDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGR 255 (281)
Q Consensus 196 fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~ 255 (281)
||+|++. ......+++.+.++|+|||.+++..... .....+.+.+. .+|....
T Consensus 167 ~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 167 YDGVALD-----LMEPWKVLEKAALALKPDRFLVAYLPNI--TQVLELVRAAEAHPFRLER 220 (258)
T ss_dssp EEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEESCH--HHHHHHHHHHTTTTEEEEE
T ss_pred cCEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeCCH--HHHHHHHHHHHHCCCceEE
Confidence 9999973 3345688999999999999988877644 23345555555 4776433
No 148
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.33 E-value=2.4e-12 Score=112.25 Aligned_cols=101 Identities=15% Similarity=0.132 Sum_probs=80.0
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVL 200 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Ii 200 (281)
++++|||+|||+|..+..++..|.+|+++|+ +.+++.++++... + +...+.. ...+.+.+||+|+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~---------~--~~~~d~~---~~~~~~~~fD~v~ 119 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVK---------N--VVEAKAE---DLPFPSGAFEAVL 119 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCS---------C--EEECCTT---SCCSCTTCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCC---------C--EEECcHH---HCCCCCCCEEEEE
Confidence 6789999999999999999999999999999 8899999877431 1 3443332 2224457899999
Q ss_pred EccccCC-CCcHHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 201 GSDVIYS-EGAVGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 201 a~d~iy~-~~~~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
+..++++ ......+++.+.++|+|||.+++....+.
T Consensus 120 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 120 ALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp ECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred EcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 9876554 46699999999999999999998876543
No 149
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.33 E-value=1.4e-11 Score=105.50 Aligned_cols=128 Identities=8% Similarity=0.006 Sum_probs=88.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++.+|||+|||+|..++.+++. +.+|+++|+ +.+++.+.+++..+ .++.+...|..+.........+|
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-------~~v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-------TNIIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-------TTEEEECSCTTCGGGGGGGCCCE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-------CCeEEEEcccCChhhhcccCCcE
Confidence 46789999999999999998875 368999999 78888888888776 25666665543311112235689
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC----hhH---HHHHHHHHh-cCCeEEEEe
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN----DSV---LEYFLEAAM-KDFVIGRVE 257 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~----~~~---~~~fl~~~~-~~f~v~~i~ 257 (281)
|+|++.-. .+.....++..+.++|+|||.++++...+. ... +..-++.+. .||.+..+.
T Consensus 149 D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 215 (233)
T 2ipx_A 149 DVIFADVA--QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQL 215 (233)
T ss_dssp EEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEE
T ss_pred EEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 99997433 445556778889999999999998765421 001 111134444 389877643
No 150
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.33 E-value=1.7e-11 Score=105.00 Aligned_cols=102 Identities=15% Similarity=0.111 Sum_probs=76.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-C-CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-CCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-G-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-QDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-g-~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-~~~~~~~f 196 (281)
.++.+|||+|||+|.+++.+++. | .+|+++|+ +.+++.+++|+..+ .++.+...+..+... ..+. .+|
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~~v~~~~~d~~~~~~~~~~~-~~~ 144 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-------ENIIPILGDANKPQEYANIV-EKV 144 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-------TTEEEEECCTTCGGGGTTTS-CCE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-------CCeEEEECCCCCcccccccC-ccE
Confidence 46789999999999999999886 4 68999999 88999999987665 257766655433110 1222 679
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
|+|+ .++ ..+.....+++.+.++|+|||.++++.
T Consensus 145 D~v~-~~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 145 DVIY-EDV-AQPNQAEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp EEEE-ECC-CSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEE-Eec-CChhHHHHHHHHHHHhCCCCcEEEEEE
Confidence 9998 232 234445888999999999999998873
No 151
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.33 E-value=1.4e-11 Score=108.38 Aligned_cols=122 Identities=12% Similarity=0.068 Sum_probs=91.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++.+|||+|||+|.+++.+++. +.+|+++|+ +.+++.+++|+..++.. .++.+...|+.+. +.+.+|
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~----~~~~~~ 182 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI----ERVTIKVRDISEG----FDEKDV 182 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG----GGEEEECCCGGGC----CSCCSE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC----CCEEEEECCHHHc----ccCCcc
Confidence 46789999999999999999886 468999999 88999999999988763 3677776655432 344679
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEe
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVE 257 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~ 257 (281)
|+|++. ......+++.+.++|+|+|.+++...... ....+.+.+. .+|....+.
T Consensus 183 D~V~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~~~--~~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 183 DALFLD-----VPDPWNYIDKCWEALKGGGRFATVCPTTN--QVQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp EEEEEC-----CSCGGGTHHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHHSSEEEEEEE
T ss_pred CEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHHCCCceeEEE
Confidence 999973 33456788999999999999888765432 2334555554 478755543
No 152
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.32 E-value=6.7e-12 Score=106.53 Aligned_cols=104 Identities=8% Similarity=0.034 Sum_probs=72.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC--CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g--~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.+|.+|||||||+|..+..+++.. .+|+++|+ +.+++.+.++++.. .++.+...|..+.........+||
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-------~~v~~~~~d~~~~~~~~~~~~~fD 128 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-------NNIIPLLFDASKPWKYSGIVEKVD 128 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-------SSEEEECSCTTCGGGTTTTCCCEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-------CCeEEEEcCCCCchhhccccccee
Confidence 467899999999999999888754 68999999 78887766665542 245444433221100011236899
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
+|++. + ..+.....+++.+.++|||||.++++..
T Consensus 129 ~V~~~-~-~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 129 LIYQD-I-AQKNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp EEEEC-C-CSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEe-c-cChhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 99976 2 3344455678999999999999998853
No 153
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.32 E-value=5.1e-12 Score=106.95 Aligned_cols=101 Identities=15% Similarity=0.109 Sum_probs=80.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|..+..++..+.+|+++|+ +.+++.++++.. .+...+..+. ...+.+.+||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~~------------~~~~~d~~~~-~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLD------------HVVLGDIETM-DMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTSS------------EEEESCTTTC-CCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCC------------cEEEcchhhc-CCCCCCCccCEE
Confidence 36789999999999999999888889999999 788888875531 2344343221 123345789999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
++.+++++......+++.+.++|+|||.++++...
T Consensus 98 ~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 98 IFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp EEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred EECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99999999888899999999999999999988654
No 154
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.32 E-value=1.2e-11 Score=114.64 Aligned_cols=134 Identities=16% Similarity=0.048 Sum_probs=94.4
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhc-CCCCCCceEEEEEecCCCCCCC-cCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLR-HGDLRGSAVVTELTWGDDPDQD-LIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~-~~~~~~~i~~~~l~w~~~~~~~-~~~~~f 196 (281)
.++++|||+|||+|.+++.+++.|+ +|+++|+ +.+++.+++|+..|++ . .++.+...|..+..... ..+.+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~----~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDL----SKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCG----GGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc----cceEEEECCHHHHHHHHHhcCCCC
Confidence 4688999999999999999999875 8999999 8899999999999987 4 36777775543211100 013579
Q ss_pred cEEEEccccCC---------CCcHHHHHHHHHHhhCCCcEEEEEEeeeChh--HHHHHHH-HHh-cCCeEEEEec
Q 023543 197 DYVLGSDVIYS---------EGAVGDLLDTLLQLCGTQTTIFLAGELRNDS--VLEYFLE-AAM-KDFVIGRVEQ 258 (281)
Q Consensus 197 D~Iia~d~iy~---------~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~--~~~~fl~-~~~-~~f~v~~i~~ 258 (281)
|+|++....+. ...+..++..+.++|+|+|.+++++...... .+...+. .+. .++.++.+..
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~ 369 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQ 369 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 99987544332 2567889999999999999999887654322 2233332 222 3655555543
No 155
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.32 E-value=3.2e-11 Score=108.79 Aligned_cols=103 Identities=16% Similarity=0.144 Sum_probs=84.9
Q ss_pred CCeEEEECCCcCHHHHHHHHc--CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEE
Q 023543 123 GKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVL 200 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Ii 200 (281)
+++|||+|||+|..+..+++. +.+++++|++.+++.+++++..++.. .++.+...|+.+. ++ .+||+|+
T Consensus 168 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~----~~-~~~D~v~ 238 (334)
T 2ip2_A 168 GRSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAG----ERVSLVGGDMLQE----VP-SNGDIYL 238 (334)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHT----TSEEEEESCTTTC----CC-SSCSEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCC----CcEEEecCCCCCC----CC-CCCCEEE
Confidence 389999999999999988875 56899999988899999999887765 4788888765432 22 5799999
Q ss_pred EccccCCCCcH--HHHHHHHHHhhCCCcEEEEEEee
Q 023543 201 GSDVIYSEGAV--GDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 201 a~d~iy~~~~~--~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
+..++++.... ..+++.+.+.|+|||.+++....
T Consensus 239 ~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 239 LSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp EESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 99999865544 49999999999999999988643
No 156
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.31 E-value=2.1e-10 Score=107.36 Aligned_cols=134 Identities=18% Similarity=0.149 Sum_probs=92.8
Q ss_pred hHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEE
Q 023543 102 SGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTE 180 (281)
Q Consensus 102 ~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~ 180 (281)
.+..+.+++.. ..++.+|||+|||+|.+++.+|+.+.+|+++|+ +++++.+++|+..|++. +.+..
T Consensus 277 ~~e~l~~~~~~-------~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~------v~~~~ 343 (425)
T 2jjq_A 277 QAVNLVRKVSE-------LVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVD------AEFEV 343 (425)
T ss_dssp HHHHHHHHHHH-------HCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC------EEEEE
T ss_pred HHHHHHHHhhc-------cCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCc------EEEEE
Confidence 34455555543 246789999999999999999999899999999 88999999999998752 66777
Q ss_pred EecCCCCCCCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhcCCeEEEEecCC
Q 023543 181 LTWGDDPDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMKDFVIGRVEQTQ 260 (281)
Q Consensus 181 l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~~f~v~~i~~~~ 260 (281)
.|..+.. ..+||+|++... +. ...+.+++.+.. ++|+|++++++. +.++.+=+..+. |++..+..-.
T Consensus 344 ~d~~~~~-----~~~fD~Vv~dPP-r~-g~~~~~~~~l~~-l~p~givyvsc~---p~tlarDl~~l~--y~l~~~~~~D 410 (425)
T 2jjq_A 344 ASDREVS-----VKGFDTVIVDPP-RA-GLHPRLVKRLNR-EKPGVIVYVSCN---PETFARDVKMLD--YRIDEIVALD 410 (425)
T ss_dssp CCTTTCC-----CTTCSEEEECCC-TT-CSCHHHHHHHHH-HCCSEEEEEESC---HHHHHHHHHHSS--CCEEEEEEEC
T ss_pred CChHHcC-----ccCCCEEEEcCC-cc-chHHHHHHHHHh-cCCCcEEEEECC---hHHHHhHHhhCe--EEEEEEEEEC
Confidence 5554322 127999997433 32 233457777654 899999999874 333322233332 7777775443
Q ss_pred C
Q 023543 261 W 261 (281)
Q Consensus 261 ~ 261 (281)
+
T Consensus 411 m 411 (425)
T 2jjq_A 411 M 411 (425)
T ss_dssp C
T ss_pred c
Confidence 3
No 157
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.31 E-value=9.3e-11 Score=106.98 Aligned_cols=117 Identities=20% Similarity=0.082 Sum_probs=86.7
Q ss_pred HHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcC---CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEE
Q 023543 104 VVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLG---AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVT 179 (281)
Q Consensus 104 ~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g---~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~ 179 (281)
..++..+..... ..++.+|||+|||+|.+++.++..+ .+|+++|+ +.+++.+++|+..+++. ++.+.
T Consensus 189 ~~la~~l~~~~~----~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-----~i~~~ 259 (354)
T 3tma_A 189 PVLAQALLRLAD----ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-----WIRFL 259 (354)
T ss_dssp HHHHHHHHHHTT----CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-----TCEEE
T ss_pred HHHHHHHHHHhC----CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-----ceEEE
Confidence 345555544321 3467899999999999999999865 68999999 88999999999998764 57777
Q ss_pred EEecCCCCCCCcCCCCCcEEEEccccCCCC---------cHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 180 ELTWGDDPDQDLIQPLPDYVLGSDVIYSEG---------AVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 180 ~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~---------~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
..|..+. .....+||+|++..+ |... .+..+++.+.++|+|||.+++...
T Consensus 260 ~~D~~~~---~~~~~~~D~Ii~npP-yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 260 RADARHL---PRFFPEVDRILANPP-HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp ECCGGGG---GGTCCCCSEEEECCC-SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred eCChhhC---ccccCCCCEEEECCC-CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 7665432 222356899887544 4321 247899999999999999888755
No 158
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.31 E-value=6.8e-12 Score=113.98 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=80.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||+|||+|.+++. ++.+.+|+++|+ +.+++.+++|++.|++. .++.+...|..+.. .+||+|
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~----~~v~~~~~D~~~~~------~~fD~V 262 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLE----HKIIPILSDVREVD------VKGNRV 262 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCGGGCC------CCEEEE
T ss_pred CCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECChHHhc------CCCcEE
Confidence 3788999999999999999 886668999999 88999999999999875 46888776654321 689999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
++. ..+. ...+++.+.++|+|+|.++++.....
T Consensus 263 i~d-pP~~---~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 263 IMN-LPKF---AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp EEC-CTTT---GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred EEC-CcHh---HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 974 3333 23788889999999998877655554
No 159
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.31 E-value=2.2e-11 Score=112.02 Aligned_cols=164 Identities=14% Similarity=0.122 Sum_probs=101.7
Q ss_pred CCceEEEEeCCCCCCCCCCcCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hh
Q 023543 76 CGHSLSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PD 154 (281)
Q Consensus 76 ~g~~l~i~q~~~~~~~~g~tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~ 154 (281)
.|..+.+..++++|+.... ..+..+..++..... ..+++|||||||+|.+++.+|+.+.+|+++|+ ++
T Consensus 178 ~g~~~~~~~~~~~F~Q~n~------~~~~~l~~~~~~~~~-----~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ 246 (369)
T 3bt7_A 178 AGKEMIYRQVENSFTQPNA------AMNIQMLEWALDVTK-----GSKGDLLELYCGNGNFSLALARNFDRVLATEIAKP 246 (369)
T ss_dssp TTBCCEEEEETTSCCCSBH------HHHHHHHHHHHHHTT-----TCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHH
T ss_pred CCceEEEEECCCCeecCCH------HHHHHHHHHHHHHhh-----cCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHH
Confidence 5666777777877665443 334556666655422 24678999999999999999998889999999 88
Q ss_pred HHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-------------CcCCCCCcEEEEccccCCCCcHHHHHHHHHHh
Q 023543 155 RLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-------------DLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQL 221 (281)
Q Consensus 155 ~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-------------~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~l 221 (281)
+++.+++|++.|++. ++.+...|..+.... .+.+.+||+|+.. .-+. .....+ .++
T Consensus 247 ai~~a~~n~~~ng~~-----~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~d-PPr~-g~~~~~----~~~ 315 (369)
T 3bt7_A 247 SVAAAQYNIAANHID-----NVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVD-PPRS-GLDSET----EKM 315 (369)
T ss_dssp HHHHHHHHHHHTTCC-----SEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEEC-CCTT-CCCHHH----HHH
T ss_pred HHHHHHHHHHHcCCC-----ceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEEC-cCcc-ccHHHH----HHH
Confidence 999999999999874 677766443211000 0001379998863 3332 122333 334
Q ss_pred hCCCcE-EEEEEeeeChhHHHHHHHHHhcCCeEEEEecCCCCCC
Q 023543 222 CGTQTT-IFLAGELRNDSVLEYFLEAAMKDFVIGRVEQTQWHPD 264 (281)
Q Consensus 222 l~~~g~-~~l~~~~r~~~~~~~fl~~~~~~f~v~~i~~~~~~~~ 264 (281)
++++|. +|+++. +.++.+=+..+.++|+++.+..-.+-|.
T Consensus 316 l~~~g~ivyvsc~---p~t~ard~~~l~~~y~~~~~~~~D~FP~ 356 (369)
T 3bt7_A 316 VQAYPRILYISCN---PETLCKNLETLSQTHKVERLALFDQFPY 356 (369)
T ss_dssp HTTSSEEEEEESC---HHHHHHHHHHHHHHEEEEEEEEECCSTT
T ss_pred HhCCCEEEEEECC---HHHHHHHHHHHhhCcEEEEEEeeccCCC
Confidence 446655 445543 3333322333345688888765444443
No 160
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.30 E-value=3.4e-11 Score=109.79 Aligned_cols=105 Identities=11% Similarity=0.086 Sum_probs=85.9
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC--CEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG--AQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g--~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..+..+++.+ .+++++|++.+++.+++|+..++.. .++.+...|+.+. ++ ..||+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~----~~-~~~D~ 252 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLS----DRVDVVEGDFFEP----LP-RKADA 252 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCT----TTEEEEECCTTSC----CS-SCEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCC----CceEEEeCCCCCC----CC-CCccE
Confidence 356899999999999999888754 5799999988999999999988764 4788888776432 22 34999
Q ss_pred EEEccccCCCCcH--HHHHHHHHHhhCCCcEEEEEEee
Q 023543 199 VLGSDVIYSEGAV--GDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 199 Iia~d~iy~~~~~--~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
|++..++++.... ..+++.+.++|+|||.+++....
T Consensus 253 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9999999876554 58999999999999999887654
No 161
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.30 E-value=4.7e-11 Score=102.71 Aligned_cols=118 Identities=12% Similarity=0.094 Sum_probs=88.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|..++.+++.+.+|+++|+ +++++.+++|+..+++. .++.+...++.+.. ..+.+||+|
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~---~~~~~~D~v 162 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLG----KNVKFFNVDFKDAE---VPEGIFHAA 162 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCC----TTEEEECSCTTTSC---CCTTCBSEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCC----CcEEEEEcChhhcc---cCCCcccEE
Confidence 46889999999999999999888889999999 88999999999988764 36777665544321 134679999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhcCCe
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMKDFV 252 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~~f~ 252 (281)
++. ......+++.+.++|+|+|.+++...... ....+...+.+.|.
T Consensus 163 ~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~f~ 208 (248)
T 2yvl_A 163 FVD-----VREPWHYLEKVHKSLMEGAPVGFLLPTAN--QVIKLLESIENYFG 208 (248)
T ss_dssp EEC-----SSCGGGGHHHHHHHBCTTCEEEEEESSHH--HHHHHHHHSTTTEE
T ss_pred EEC-----CcCHHHHHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHhhCC
Confidence 973 23456788999999999999988876432 23345555443344
No 162
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.30 E-value=3e-12 Score=109.27 Aligned_cols=130 Identities=10% Similarity=-0.031 Sum_probs=90.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|..+..++..+.+|+++|+ +.+++.+++|+..++ ++.+...+..+.. ....+||+|
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~-------~v~~~~~d~~~~~---~~~~~fD~v 138 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN-------NIKLILGDGTLGY---EEEKPYDRV 138 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS-------SEEEEESCGGGCC---GGGCCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC-------CeEEEECCccccc---ccCCCccEE
Confidence 46789999999999999999998899999999 889999999987653 4667766554311 124689999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhcCCeEEEEecCCCCCCCCC
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMKDFVIGRVEQTQWHPDYCS 267 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~~f~v~~i~~~~~~~~~~~ 267 (281)
++..++++.. ..+.++|+|||.+++.........+..+.. ....|....+....+.+....
T Consensus 139 ~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 199 (231)
T 1vbf_A 139 VVWATAPTLL------CKPYEQLKEGGIMILPIGVGRVQKLYKVIK-KGNSPSLENLGEVMFGRIGGL 199 (231)
T ss_dssp EESSBBSSCC------HHHHHTEEEEEEEEEEECSSSSEEEEEEEC-CTTSCEEEEEEEECCCBCCST
T ss_pred EECCcHHHHH------HHHHHHcCCCcEEEEEEcCCCccEEEEEEE-cCCeeEEEEeccEEEEEcCCc
Confidence 9999887643 468889999999988865443211111111 123566666554444444333
No 163
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.29 E-value=6.2e-12 Score=108.32 Aligned_cols=130 Identities=13% Similarity=0.096 Sum_probs=93.9
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC--------
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-------- 188 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-------- 188 (281)
.++++|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. .++.+...+..+...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~----~~v~~~~~d~~~~~~~~~~~~~~ 134 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE----NKIFLKLGSALETLQVLIDSKSA 134 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCSSC
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CCEEEEECCHHHHHHHHHhhccc
Confidence 46789999999999999999885 579999999 88999999999988764 357777655322100
Q ss_pred ----CCcCC--CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeCh------------hHHHHHHHHHhc-
Q 023543 189 ----QDLIQ--PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRND------------SVLEYFLEAAMK- 249 (281)
Q Consensus 189 ----~~~~~--~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~------------~~~~~fl~~~~~- 249 (281)
..+.. .+||+|++.. .......+++.+.++|+|||.+++....... ..++.|.+.+..
T Consensus 135 ~~~~~~f~~~~~~fD~I~~~~---~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (239)
T 2hnk_A 135 PSWASDFAFGPSSIDLFFLDA---DKENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYND 211 (239)
T ss_dssp CGGGTTTCCSTTCEEEEEECS---CGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHC
T ss_pred ccccccccCCCCCcCEEEEeC---CHHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhC
Confidence 01122 6899999763 3456778999999999999999887532211 134566666653
Q ss_pred -CCeEEEEe
Q 023543 250 -DFVIGRVE 257 (281)
Q Consensus 250 -~f~v~~i~ 257 (281)
.|.+..++
T Consensus 212 ~~~~~~~~p 220 (239)
T 2hnk_A 212 SLVDVSLVP 220 (239)
T ss_dssp TTEEEEEEC
T ss_pred CCeEEEEEE
Confidence 56666665
No 164
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.29 E-value=4.8e-12 Score=109.73 Aligned_cols=113 Identities=20% Similarity=0.146 Sum_probs=78.0
Q ss_pred CCCeEEEECCCcCHHHHHHHHc----CCEEEEEec-hhHHHHHHHHHHHh---hcCCC---------------------C
Q 023543 122 HGKKIVELGSGCGLVGCIAALL----GAQVILTDL-PDRLRLLKKNIENN---LRHGD---------------------L 172 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~----g~~V~~tD~-~~~l~~~~~N~~~n---~~~~~---------------------~ 172 (281)
++.+|||+|||+|.+++.++.. +.+|+++|+ +.+++.+++|+..+ ++... .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999998876 568999999 88999999998876 43200 0
Q ss_pred CCceE-------------EEEEecCCCCCC-Cc-CCCCCcEEEEccccCCC---------CcHHHHHHHHHHhhCCCcEE
Q 023543 173 RGSAV-------------VTELTWGDDPDQ-DL-IQPLPDYVLGSDVIYSE---------GAVGDLLDTLLQLCGTQTTI 228 (281)
Q Consensus 173 ~~~i~-------------~~~l~w~~~~~~-~~-~~~~fD~Iia~d~iy~~---------~~~~~ll~~l~~ll~~~g~~ 228 (281)
..++. +...|+.+.... .. ...+||+|++..+.... .....+++.+.++|+|||.+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 00033 555554321100 00 23489999987554332 33568999999999999999
Q ss_pred EEEEee
Q 023543 229 FLAGEL 234 (281)
Q Consensus 229 ~l~~~~ 234 (281)
+++...
T Consensus 211 ~~~~~~ 216 (250)
T 1o9g_A 211 AVTDRS 216 (250)
T ss_dssp EEEESS
T ss_pred EEeCcc
Confidence 885443
No 165
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.29 E-value=1.9e-11 Score=103.14 Aligned_cols=101 Identities=13% Similarity=0.112 Sum_probs=80.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC---CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG---AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g---~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++.+|||+|||+|..+..+++.+ .+|+++|+ +.+++.+++|+..++.. ++.+...+..... ....+|
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~---~~~~~f 147 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-----NVIVIVGDGTLGY---EPLAPY 147 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-----TEEEEESCGGGCC---GGGCCE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CeEEEECCcccCC---CCCCCe
Confidence 567899999999999999988865 78999999 88999999999988764 5777765542211 124689
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
|+|++..++++.. +.+.++|+|||.+++.....
T Consensus 148 D~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 148 DRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp EEEEESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred eEEEECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 9999999887643 57889999999998887544
No 166
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.28 E-value=4.1e-11 Score=107.86 Aligned_cols=138 Identities=15% Similarity=0.081 Sum_probs=93.8
Q ss_pred chHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCce
Q 023543 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSA 176 (281)
Q Consensus 101 ~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i 176 (281)
.++.+++..+. ..++.+|||+|||+|..++.++.. +.+|+++|+ +.+++.+++|++.++.. ++
T Consensus 105 ~~s~l~~~~l~--------~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-----~v 171 (315)
T 1ixk_A 105 ASSMYPPVALD--------PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-----NV 171 (315)
T ss_dssp HHHHHHHHHHC--------CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-----SE
T ss_pred HHHHHHHHHhC--------CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-----eE
Confidence 44555555543 346889999999999999988864 368999999 88999999999999865 56
Q ss_pred EEEEEecCCCCCCCcCCCCCcEEEEccc------cCCCC----------------cHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 177 VVTELTWGDDPDQDLIQPLPDYVLGSDV------IYSEG----------------AVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 177 ~~~~l~w~~~~~~~~~~~~fD~Iia~d~------iy~~~----------------~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
.+...|..+. .....+||+|++.-. +.... ....+++.+.++|+|||.++++.-.
T Consensus 172 ~~~~~D~~~~---~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 172 ILFHSSSLHI---GELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp EEESSCGGGG---GGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEECChhhc---ccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 6666544321 112457999997322 21111 1258899999999999998875432
Q ss_pred ----eChhHHHHHHHHHhcCCeEEEE
Q 023543 235 ----RNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 235 ----r~~~~~~~fl~~~~~~f~v~~i 256 (281)
.+...++.|++. .+|.+..+
T Consensus 249 ~~~~Ene~~v~~~l~~--~~~~~~~~ 272 (315)
T 1ixk_A 249 LEPEENEFVIQWALDN--FDVELLPL 272 (315)
T ss_dssp CCGGGTHHHHHHHHHH--SSEEEECC
T ss_pred CChHHhHHHHHHHHhc--CCCEEecC
Confidence 234455666653 35665544
No 167
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.28 E-value=7.5e-12 Score=107.20 Aligned_cols=105 Identities=13% Similarity=0.073 Sum_probs=82.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.++++|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. .++.+...+..+.......+.+||
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~fD 128 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLE----SRIELLFGDALQLGEKLELYPLFD 128 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCT----TTEEEECSCGGGSHHHHTTSCCEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECCHHHHHHhcccCCCcc
Confidence 46789999999999999998886 679999999 88999999999998764 457777655432111100146899
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
+|++.... .....+++.+.++|+|||.+++..
T Consensus 129 ~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 129 VLFIDAAK---GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEEGGG---SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred EEEECCCH---HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 99986553 467889999999999999998863
No 168
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.28 E-value=7.1e-12 Score=105.68 Aligned_cols=102 Identities=12% Similarity=0.050 Sum_probs=80.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++++|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. .++.+...++.+..+. ... |
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~--~~~-f 127 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI----DRVELQVGDPLGIAAG--QRD-I 127 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG----GGEEEEESCHHHHHTT--CCS-E
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC----ceEEEEEecHHHHhcc--CCC-C
Confidence 46789999999999999999875 679999999 88999999999988764 4677777654322111 124 9
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
|+|++.. .......+++.+.++|+|||.+++..
T Consensus 128 D~v~~~~---~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 128 DILFMDC---DVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EEEEEET---TTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred CEEEEcC---ChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 9998752 34667899999999999999988754
No 169
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.28 E-value=2.3e-11 Score=108.86 Aligned_cols=114 Identities=12% Similarity=-0.045 Sum_probs=84.1
Q ss_pred CCCeEEEECCCcCHHHHHHHHc-CCEEEEEec-hhHHHHHHHHHHHhhcCCC--CCCceEEEEEecCCCCC-CCcC--CC
Q 023543 122 HGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGD--LRGSAVVTELTWGDDPD-QDLI--QP 194 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~-g~~V~~tD~-~~~l~~~~~N~~~n~~~~~--~~~~i~~~~l~w~~~~~-~~~~--~~ 194 (281)
++.+|||+|||+|..+..++.. +.+|+++|+ +.+++.++++...++.... ...++.+...|..+... ..+. ..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 6789999999999988888864 568999999 8899999998877642100 01357777766544220 0122 34
Q ss_pred CCcEEEEccccCCC----CcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 195 LPDYVLGSDVIYSE----GAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 195 ~fD~Iia~d~iy~~----~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
+||+|+++.++++. .....+++.+.++|+|||.++++....
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 89999999998764 446789999999999999998886643
No 170
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.27 E-value=3.3e-11 Score=107.17 Aligned_cols=157 Identities=17% Similarity=0.199 Sum_probs=99.9
Q ss_pred chHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEE
Q 023543 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (281)
Q Consensus 101 ~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~ 178 (281)
.++..|.+.|... ....++++|||+|||||.++..+++.|+ +|+++|+ +.|++.+.++ + .++..
T Consensus 68 rg~~Kl~~~l~~~----~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~---~-------~rv~~ 133 (291)
T 3hp7_A 68 RGGLKLEKALAVF----NLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ---D-------DRVRS 133 (291)
T ss_dssp TTHHHHHHHHHHT----TCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT---C-------TTEEE
T ss_pred chHHHHHHHHHhc----CCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---C-------cccce
Confidence 4466676676653 1235788999999999999999988886 8999999 8888764432 1 11211
Q ss_pred EE-EecCCCCCCCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe---------------eeChh----
Q 023543 179 TE-LTWGDDPDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE---------------LRNDS---- 238 (281)
Q Consensus 179 ~~-l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~---------------~r~~~---- 238 (281)
.. .+........++.++||+|++ |+.+. .+..++..+.++|+|||.+++... .|++.
T Consensus 134 ~~~~ni~~l~~~~l~~~~fD~v~~-d~sf~--sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~ 210 (291)
T 3hp7_A 134 MEQYNFRYAEPVDFTEGLPSFASI-DVSFI--SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEK 210 (291)
T ss_dssp ECSCCGGGCCGGGCTTCCCSEEEE-CCSSS--CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHH
T ss_pred ecccCceecchhhCCCCCCCEEEE-EeeHh--hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHH
Confidence 11 010000111223345999886 44433 458899999999999999887621 12222
Q ss_pred HHHHHHHHHh-cCCeEEEEecCCCCCCCCCCcEEEEE
Q 023543 239 VLEYFLEAAM-KDFVIGRVEQTQWHPDYCSPRVVVYI 274 (281)
Q Consensus 239 ~~~~fl~~~~-~~f~v~~i~~~~~~~~~~~~~~~i~~ 274 (281)
..+.+.+.+. .||.+..+....+.-.-.+..|.+|.
T Consensus 211 ~~~~v~~~~~~~Gf~v~~~~~spi~g~~gn~e~l~~~ 247 (291)
T 3hp7_A 211 VLETVTAFAVDYGFSVKGLDFSPIQGGHGNIEFLAHL 247 (291)
T ss_dssp HHHHHHHHHHHTTEEEEEEEECSSCCGGGCCCEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCCcCHHHHHHh
Confidence 3344455444 49999999877765555566777664
No 171
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.27 E-value=8.6e-12 Score=110.65 Aligned_cols=105 Identities=14% Similarity=0.223 Sum_probs=76.7
Q ss_pred CCCeEEEECCCcCHHHHHH-----HH-cCCEE--EEEec-hhHHHHHHHHHHHh-hcCCCCCCceEEEEEecCCCCCCC-
Q 023543 122 HGKKIVELGSGCGLVGCIA-----AL-LGAQV--ILTDL-PDRLRLLKKNIENN-LRHGDLRGSAVVTELTWGDDPDQD- 190 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~-----a~-~g~~V--~~tD~-~~~l~~~~~N~~~n-~~~~~~~~~i~~~~l~w~~~~~~~- 190 (281)
++.+|||||||+|.++..+ ++ .+..| +++|. ++|++.+++++... +. .++.+. |.......
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-----~~v~~~---~~~~~~~~~ 123 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-----ENVKFA---WHKETSSEY 123 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-----TTEEEE---EECSCHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-----CcceEE---EEecchhhh
Confidence 4679999999999765432 22 24444 99999 88999999887653 22 234432 22211111
Q ss_pred -------cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 191 -------LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 191 -------~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
+.+.+||+|+++.++++..+...+++.+.++|||||.++++...
T Consensus 124 ~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 124 QSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp HHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 23578999999999999999999999999999999999887543
No 172
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.27 E-value=1.3e-11 Score=105.22 Aligned_cols=129 Identities=14% Similarity=0.098 Sum_probs=93.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcC----
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLI---- 192 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~---- 192 (281)
.++++|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. .++.+...+..+... .+.
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~----~~i~~~~~d~~~~~~-~~~~~~~ 142 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE----HKIDLRLKPALETLD-ELLAAGE 142 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHH-HHHHTTC
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC----CeEEEEEcCHHHHHH-HHHhcCC
Confidence 46789999999999999999874 568999999 88999999999998764 467777754322111 111
Q ss_pred CCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC------------hhHHHHHHHHHhc--CCeEEEEe
Q 023543 193 QPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN------------DSVLEYFLEAAMK--DFVIGRVE 257 (281)
Q Consensus 193 ~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~------------~~~~~~fl~~~~~--~f~v~~i~ 257 (281)
..+||+|++... ......+++.+.++|+|||.+++...... ...++.|.+.+.. .|....++
T Consensus 143 ~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 218 (229)
T 2avd_A 143 AGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLP 218 (229)
T ss_dssp TTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred CCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEe
Confidence 167999997433 45678899999999999999888654321 1234567776653 56666554
No 173
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.27 E-value=4.6e-11 Score=100.74 Aligned_cols=124 Identities=15% Similarity=0.083 Sum_probs=85.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|..+..+ +.+|+++|+ +. + +.+...+..+ ..+.+.+||+|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l---~~~v~~~D~s~~-----------~---------~~~~~~d~~~---~~~~~~~fD~v 119 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI---RNPVHCFDLASL-----------D---------PRVTVCDMAQ---VPLEDESVDVA 119 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC---CSCEEEEESSCS-----------S---------TTEEESCTTS---CSCCTTCEEEE
T ss_pred CCCCeEEEECCcCCHHHHHh---hccEEEEeCCCC-----------C---------ceEEEecccc---CCCCCCCEeEE
Confidence 46789999999999887766 478999999 44 1 1233433322 22345689999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEEecCCCCCCCCCCcEEEEEEEec
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRVEQTQWHPDYCSPRVVVYILVKK 278 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i~~~~~~~~~~~~~~~i~~~~~k 278 (281)
+++.++++ .....+++.+.++|+|||.++++.........+.+.+.+. .||.+..... ....+.++..+|.
T Consensus 120 ~~~~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~-------~~~~~~~~~~~k~ 191 (215)
T 2zfu_A 120 VFCLSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDL-------TNSHFFLFDFQKT 191 (215)
T ss_dssp EEESCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEEC-------CSTTCEEEEEEEC
T ss_pred EEehhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEec-------CCCeEEEEEEEec
Confidence 99999974 7889999999999999999998865442222344555555 4898777542 2223455555554
No 174
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.26 E-value=1.6e-11 Score=110.44 Aligned_cols=99 Identities=11% Similarity=0.060 Sum_probs=79.9
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC---EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA---QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~---~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++.+|||+|||+|..++.+++.+. +|+++|+ +++++.+++|+..++.. ++.+...|..+.. ....+|
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-----~v~~~~~d~~~~~---~~~~~f 145 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-----NVIFVCGDGYYGV---PEFSPY 145 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCGGGCC---GGGCCE
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CeEEEECChhhcc---ccCCCe
Confidence 4688999999999999999988654 5999999 88999999999988765 5777776654322 124689
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
|+|++..++.+.. +.+.++|+|||++++...
T Consensus 146 D~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 146 DVIFVTVGVDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EEEEECSBBSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred EEEEEcCCHHHHH------HHHHHhcCCCcEEEEEEC
Confidence 9999999886644 577889999999988754
No 175
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.26 E-value=1.3e-11 Score=107.31 Aligned_cols=104 Identities=14% Similarity=0.089 Sum_probs=81.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCc-----
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL----- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~----- 191 (281)
.++++|||+|||+|..++.+++. +.+|+++|+ +++++.+++|+..++.. .++.+...+..+..+ .+
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~----~~i~~~~gda~~~l~-~l~~~~~ 152 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD----HKIDFREGPALPVLD-EMIKDEK 152 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHH-HHHHSGG
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CCeEEEECCHHHHHH-HHHhccC
Confidence 46789999999999999999874 679999999 88999999999988764 467777755422111 11
Q ss_pred CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
...+||+|++... ......+++.+.++|+|||.+++..
T Consensus 153 ~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 153 NHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp GTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 1468999987432 4567899999999999999988754
No 176
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.26 E-value=9.7e-11 Score=94.55 Aligned_cols=133 Identities=13% Similarity=0.056 Sum_probs=87.8
Q ss_pred HHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc---CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEE
Q 023543 103 GVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL---GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVT 179 (281)
Q Consensus 103 s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~ 179 (281)
...+.+++... ....++.+|||+|||+|..+..+++. +.+|+++|++.+++. .++.+.
T Consensus 7 ~~~l~~~~~~~----~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~---------------~~~~~~ 67 (180)
T 1ej0_A 7 WFKLDEIQQSD----KLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPI---------------VGVDFL 67 (180)
T ss_dssp HHHHHHHHHHH----CCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCC---------------TTEEEE
T ss_pred HHHHHHHHHHh----CCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccccc---------------CcEEEE
Confidence 34455555432 11346789999999999999988875 368999999335421 256666
Q ss_pred EEecCCCC-----CCCcCCCCCcEEEEccccCCCCcH-----------HHHHHHHHHhhCCCcEEEEEEeeeChhHHHHH
Q 023543 180 ELTWGDDP-----DQDLIQPLPDYVLGSDVIYSEGAV-----------GDLLDTLLQLCGTQTTIFLAGELRNDSVLEYF 243 (281)
Q Consensus 180 ~l~w~~~~-----~~~~~~~~fD~Iia~d~iy~~~~~-----------~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~f 243 (281)
..++.+.. ...+.+.+||+|++..+++..... ..+++.+.++|+|||.+++........ ..+
T Consensus 68 ~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~--~~~ 145 (180)
T 1ej0_A 68 QGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGF--DEY 145 (180)
T ss_dssp ESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTH--HHH
T ss_pred EcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcH--HHH
Confidence 65543210 000345689999998887765544 789999999999999998876544332 335
Q ss_pred HHHHhcCCeEEEE
Q 023543 244 LEAAMKDFVIGRV 256 (281)
Q Consensus 244 l~~~~~~f~v~~i 256 (281)
.+.+...|....+
T Consensus 146 ~~~~~~~~~~~~~ 158 (180)
T 1ej0_A 146 LREIRSLFTKVKV 158 (180)
T ss_dssp HHHHHHHEEEEEE
T ss_pred HHHHHHhhhhEEe
Confidence 5555555654444
No 177
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.26 E-value=1.1e-11 Score=106.05 Aligned_cols=128 Identities=16% Similarity=0.056 Sum_probs=90.9
Q ss_pred CCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 123 GKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
+.+|||||||+|..++.+++. +.+|+++|+ +++++.+++|++.++.. ..++.+...+..+... .+.+.+||+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~---~~~i~~~~gda~~~l~-~~~~~~fD~ 132 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS---PSRVRFLLSRPLDVMS-RLANDSYQL 132 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC---GGGEEEECSCHHHHGG-GSCTTCEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---cCcEEEEEcCHHHHHH-HhcCCCcCe
Confidence 349999999999999998873 679999999 88999999999998753 1367777644322111 122578999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeee----------Chh--HHHHHHHHHhc--CCeEEEEe
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELR----------NDS--VLEYFLEAAMK--DFVIGRVE 257 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r----------~~~--~~~~fl~~~~~--~f~v~~i~ 257 (281)
|+... .......+++.+.++|+|||.+++..... ... .++.|.+.+.. +|....++
T Consensus 133 V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 202 (221)
T 3dr5_A 133 VFGQV---SPMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLP 202 (221)
T ss_dssp EEECC---CTTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEES
T ss_pred EEEcC---cHHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEee
Confidence 98643 24567789999999999999988753322 111 34667776664 56665554
No 178
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.26 E-value=2.3e-11 Score=110.52 Aligned_cols=106 Identities=15% Similarity=0.122 Sum_probs=86.7
Q ss_pred CCeEEEECCCcCHHHHHHHHc--CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEE
Q 023543 123 GKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVL 200 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Ii 200 (281)
+++|||+|||+|..+..+++. +.+++++|++.+++.+++++..++.. +++.+...|+.+... ....+||+|+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~--~~~~~~D~v~ 253 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLG----GRVEFFEKNLLDARN--FEGGAADVVM 253 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCG----GGEEEEECCTTCGGG--GTTCCEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCC----CceEEEeCCcccCcc--cCCCCccEEE
Confidence 789999999999999988875 56899999988999999999887765 478888876543210 1335699999
Q ss_pred EccccCCCCc--HHHHHHHHHHhhCCCcEEEEEEee
Q 023543 201 GSDVIYSEGA--VGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 201 a~d~iy~~~~--~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
+..++++... ...+++.+.+.|+|||.+++....
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 254 LNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 9999987654 589999999999999999887643
No 179
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.25 E-value=3.1e-11 Score=107.73 Aligned_cols=133 Identities=8% Similarity=-0.006 Sum_probs=87.4
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
++++|||||||+|.++..+++. ..+|+++|+ +.+++.+++|+...+...-...++.+...|..+.... ...+||+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~fDv 160 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ--TSQTFDV 160 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C--CCCCEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh--cCCCccE
Confidence 5689999999999999988885 357999999 8899999999876532100123566666554322211 3468999
Q ss_pred EEE--ccccCCCCcH--HHHHHHHHHhhCCCcEEEEEEee--eChhHHHHHHHHHhcCCeEEEE
Q 023543 199 VLG--SDVIYSEGAV--GDLLDTLLQLCGTQTTIFLAGEL--RNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 199 Iia--~d~iy~~~~~--~~ll~~l~~ll~~~g~~~l~~~~--r~~~~~~~fl~~~~~~f~v~~i 256 (281)
|++ .+.......+ ..+++.+.++|+|||++++.... .....+..++..+.+.|.....
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~ 224 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGF 224 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEE
Confidence 998 3322112222 77999999999999998776532 2234456677777766764443
No 180
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.25 E-value=1.6e-11 Score=116.63 Aligned_cols=103 Identities=15% Similarity=0.172 Sum_probs=81.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++++|||+|||+|.+++.+++.++ +|+++|++.+++.+++|+..|++. .++.+...++.+. .+ ..+||+|
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~----~~v~~~~~d~~~~---~~-~~~fD~I 228 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLT----DRIVVIPGKVEEV---SL-PEQVDII 228 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCT----TTEEEEESCTTTC---CC-SSCEEEE
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCC----CcEEEEECchhhC---cc-CCCeEEE
Confidence 5788999999999999999998765 899999944999999999999875 5788888776542 12 2579999
Q ss_pred EEccccCCC--CcHHHHHHHHHHhhCCCcEEEEE
Q 023543 200 LGSDVIYSE--GAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 200 ia~d~iy~~--~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
++..+.|+. ......+..+.++|+|||.+++.
T Consensus 229 vs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 229 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp ECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred EEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 997776653 34455666778999999998753
No 181
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.25 E-value=1e-10 Score=115.87 Aligned_cols=124 Identities=15% Similarity=0.061 Sum_probs=90.2
Q ss_pred HHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcC---CEEEEEec-hhHHHHHHHHHHHhhcC-CCCCCceE
Q 023543 103 GVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLG---AQVILTDL-PDRLRLLKKNIENNLRH-GDLRGSAV 177 (281)
Q Consensus 103 s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g---~~V~~tD~-~~~l~~~~~N~~~n~~~-~~~~~~i~ 177 (281)
.....+++...+. ..++++|||||||+|.+++.+++.+ .+|+++|+ +.+++.+++++...... .....++.
T Consensus 706 ~eqRle~LLelL~----~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVe 781 (950)
T 3htx_A 706 SKQRVEYALKHIR----ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSAT 781 (950)
T ss_dssp HHHHHHHHHHHHH----HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEE
T ss_pred HHHHHHHHHHHhc----ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceE
Confidence 3344555554322 2478899999999999999999987 68999999 88999999877654211 00113677
Q ss_pred EEEEecCCCCCCCcCCCCCcEEEEccccCCCCc--HHHHHHHHHHhhCCCcEEEEEEee
Q 023543 178 VTELTWGDDPDQDLIQPLPDYVLGSDVIYSEGA--VGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 178 ~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~--~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
+...|..+ ......+||+|++.+++++... ...+++.+.++|+|| .++++.+.
T Consensus 782 fiqGDa~d---Lp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 782 LYDGSILE---FDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEESCTTS---CCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEECchHh---CCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 77755433 3334578999999999988665 346999999999999 77776543
No 182
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.25 E-value=4.1e-11 Score=109.07 Aligned_cols=101 Identities=13% Similarity=0.128 Sum_probs=78.2
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
++.+|||+|||+|..+..+++. +.+++++|++.++. ++++...+.. .++.+...|..+ .++ +||+|
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~--~~~~~~~~~~----~~v~~~~~d~~~----~~p--~~D~v 251 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA--RHRLDAPDVA----GRWKVVEGDFLR----EVP--HADVH 251 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT--TCCCCCGGGT----TSEEEEECCTTT----CCC--CCSEE
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh--cccccccCCC----CCeEEEecCCCC----CCC--CCcEE
Confidence 5679999999999999988874 44799999976655 4343333333 578888866531 122 89999
Q ss_pred EEccccCCCCcH--HHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGAV--GDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~~--~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
++..++|+..+. ..+++.+++.|+|||.+++....
T Consensus 252 ~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 252 VLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred EEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 999999987766 69999999999999999887653
No 183
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.24 E-value=2.2e-11 Score=104.51 Aligned_cols=101 Identities=14% Similarity=0.122 Sum_probs=78.9
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC-CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g-~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|..++.+++.+ .+|+++|+ +.+++.+++|+..++.. ++.+...+..... ....+||+
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~---~~~~~fD~ 161 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-----NVHVILGDGSKGF---PPKAPYDV 161 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCGGGCC---GGGCCEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CcEEEECCcccCC---CCCCCccE
Confidence 467899999999999999999866 78999999 88999999999988764 4777665541111 12346999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
|++..++.+.. +.+.++|+|||.+++.....
T Consensus 162 Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 162 IIVTAGAPKIP------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp EEECSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 99988875532 46788999999999887644
No 184
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.24 E-value=2.4e-11 Score=103.51 Aligned_cols=104 Identities=16% Similarity=0.142 Sum_probs=77.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-C--CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-g--~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++.+|||+|||+|..++.+++. | .+|+++|+ +.+++.+++|+..+ .++.+...|..+.........+|
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-------~~v~~~~~d~~~~~~~~~~~~~~ 144 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-------RNIVPILGDATKPEEYRALVPKV 144 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-------TTEEEEECCTTCGGGGTTTCCCE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-------CCCEEEEccCCCcchhhcccCCc
Confidence 46789999999999999999875 3 68999999 88999999988765 25777776554311101123579
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
|+|++... .+.....+++.+.++|+|||.+++...
T Consensus 145 D~v~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 145 DVIFEDVA--QPTQAKILIDNAEVYLKRGGYGMIAVK 179 (227)
T ss_dssp EEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECCC--CHhHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 99996433 344445669999999999999888743
No 185
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.24 E-value=4.3e-11 Score=103.59 Aligned_cols=113 Identities=7% Similarity=-0.070 Sum_probs=78.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC--CEEEEEec-hhHHHHHHHHHHHhhcCCC---CCCceEEEEEecCCCCCCCcCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGD---LRGSAVVTELTWGDDPDQDLIQP 194 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g--~~V~~tD~-~~~l~~~~~N~~~n~~~~~---~~~~i~~~~l~w~~~~~~~~~~~ 194 (281)
.++.+|||+|||+|..++.+++.+ .+|+++|+ +.+++.+++|+..+..... ...++.+...|..+.....+...
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 367899999999999999999875 47999999 8899999999988721100 01367777766543222223456
Q ss_pred CCcEEEEccc--cCCCC------cHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 195 LPDYVLGSDV--IYSEG------AVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 195 ~fD~Iia~d~--iy~~~------~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
.+|.|+.... .+... ....+++.+.++|+|||.+++...
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 7888875422 11100 115899999999999999888643
No 186
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.24 E-value=1.2e-11 Score=107.37 Aligned_cols=82 Identities=15% Similarity=0.173 Sum_probs=62.0
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcC---CCC
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLI---QPL 195 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~---~~~ 195 (281)
++.+|||+|||+|.+++.++.. +.+|+++|+ +.+++.+++|+..+++. +++.+...|..+.....+. +.+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLS----DLIKVVKVPQKTLLMDALKEESEII 140 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTCSSTTTSTTCCSCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCC----ccEEEEEcchhhhhhhhhhcccCCc
Confidence 5789999999999998888764 689999999 88999999999998765 4588887664331111122 257
Q ss_pred CcEEEEccccCC
Q 023543 196 PDYVLGSDVIYS 207 (281)
Q Consensus 196 fD~Iia~d~iy~ 207 (281)
||+|+++.+.+.
T Consensus 141 fD~i~~npp~~~ 152 (254)
T 2h00_A 141 YDFCMCNPPFFA 152 (254)
T ss_dssp BSEEEECCCCC-
T ss_pred ccEEEECCCCcc
Confidence 999998765543
No 187
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.24 E-value=2.4e-10 Score=95.13 Aligned_cols=133 Identities=14% Similarity=0.005 Sum_probs=82.1
Q ss_pred HHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc----CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEE
Q 023543 103 GVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL----GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVV 178 (281)
Q Consensus 103 s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~----g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~ 178 (281)
+..|.+.+... ....++.+|||||||+|.+++.+++. +.+|+++|++.+. .. .++.+
T Consensus 7 ~~kl~~~~~~~----~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~~-----~~v~~ 67 (201)
T 2plw_A 7 AYKLIELDNKY----LFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------PI-----PNVYF 67 (201)
T ss_dssp HHHHHHHHHHH----CCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------CC-----TTCEE
T ss_pred HHHHHHHHHHc----CCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------CC-----CCceE
Confidence 44555544432 11346789999999999999999875 3689999994431 01 24566
Q ss_pred EEEecCCCCCC----------------------CcCCCCCcEEEEccccCCCC----cH-------HHHHHHHHHhhCCC
Q 023543 179 TELTWGDDPDQ----------------------DLIQPLPDYVLGSDVIYSEG----AV-------GDLLDTLLQLCGTQ 225 (281)
Q Consensus 179 ~~l~w~~~~~~----------------------~~~~~~fD~Iia~d~iy~~~----~~-------~~ll~~l~~ll~~~ 225 (281)
...|+.+.... .+.+.+||+|++...++... +. ..+++.+.++|+||
T Consensus 68 ~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkpg 147 (201)
T 2plw_A 68 IQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIG 147 (201)
T ss_dssp EECCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred EEccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCC
Confidence 66555432100 02346899999866554421 11 24788899999999
Q ss_pred cEEEEEEeeeChhHHHHHHHHHhcCCeEEEE
Q 023543 226 TTIFLAGELRNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 226 g~~~l~~~~r~~~~~~~fl~~~~~~f~v~~i 256 (281)
|.+++....... ...+...+...|....+
T Consensus 148 G~lv~~~~~~~~--~~~l~~~l~~~f~~v~~ 176 (201)
T 2plw_A 148 GTYIVKMYLGSQ--TNNLKTYLKGMFQLVHT 176 (201)
T ss_dssp EEEEEEEECSTT--HHHHHHHHHTTEEEEEE
T ss_pred CEEEEEEeCCCC--HHHHHHHHHHHHheEEE
Confidence 998875443222 23455556666654333
No 188
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.24 E-value=6.8e-11 Score=102.08 Aligned_cols=126 Identities=6% Similarity=-0.072 Sum_probs=82.9
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcC-CCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRH-GDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~-~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
++.+|||||||+|..++.+|+. +.+|+|+|+ +.+++.+++|+...... .....++.+...|..+..+..+....||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 5668999999999999999875 468999999 88999999988652110 0012468887766533111113456899
Q ss_pred EEEEccccCCCC--------cHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhc
Q 023543 198 YVLGSDVIYSEG--------AVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMK 249 (281)
Q Consensus 198 ~Iia~d~iy~~~--------~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~ 249 (281)
.|+..-.--+.. ..+.+++.+.++|+|||.+++.... ....+...+.+..
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~--~~~~~~~~~~l~~ 183 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV--LELHDWMCTHFEE 183 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC--HHHHHHHHHHHHT
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC--HHHHHHHHHHHHH
Confidence 987642211110 1257999999999999999887543 2333334444443
No 189
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.23 E-value=2e-11 Score=103.95 Aligned_cols=108 Identities=16% Similarity=0.103 Sum_probs=80.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-------EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-Cc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-------QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DL 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-------~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~ 191 (281)
.++.+|||+|||+|..++.+++... +|+++|+ +++++.+++|+..++.......++.+...|..+.... ..
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 4678999999999999999988653 8999999 8899999999998863000013677777665432100 02
Q ss_pred CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 192 IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
...+||+|++...+.+ +++.+.++|+|||.+++....
T Consensus 159 ~~~~fD~I~~~~~~~~------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 159 ELGLFDAIHVGASASE------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHCCEEEEEECSBBSS------CCHHHHHHEEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHH------HHHHHHHhcCCCcEEEEEEcc
Confidence 3467999999887753 457889999999999888764
No 190
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.23 E-value=1.6e-10 Score=106.25 Aligned_cols=106 Identities=11% Similarity=0.066 Sum_probs=81.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC--EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~--~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.++++|||+| |+|.+++.+++.++ +|+++|+ +.+++.+++|+..+++. ++.+...|+.+..+. ..+.+||
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-----~v~~~~~D~~~~l~~-~~~~~fD 243 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-----DIEIFTFDLRKPLPD-YALHKFD 243 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-----CEEEECCCTTSCCCT-TTSSCBS
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CEEEEEChhhhhchh-hccCCcc
Confidence 4688999999 99999999998765 8999999 89999999999999763 577777665442211 1235799
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCc-EEEEEEee
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQT-TIFLAGEL 234 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g-~~~l~~~~ 234 (281)
+|++..+ |.......+++.+.++|+||| .++++...
T Consensus 244 ~Vi~~~p-~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 244 TFITDPP-ETLEAIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp EEEECCC-SSHHHHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred EEEECCC-CchHHHHHHHHHHHHHcccCCeEEEEEEec
Confidence 9997654 443346889999999999999 44555544
No 191
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.22 E-value=1.9e-11 Score=113.38 Aligned_cols=132 Identities=15% Similarity=0.060 Sum_probs=92.4
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC-cCCCCCcE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-LIQPLPDY 198 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~-~~~~~fD~ 198 (281)
++++|||+|||+|.+++.+++.|+ +|+++|+ +.+++.+++|+..|++. .++.+...|..+..... ....+||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~----~~v~~~~~d~~~~~~~~~~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVE----DRMKFIVGSAFEEMEKLQKKGEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----ccceEEECCHHHHHHHHHhhCCCCCE
Confidence 788999999999999999999876 8999999 88999999999999865 36777776543211100 01458999
Q ss_pred EEEccccCCC---------CcHHHHHHHHHHhhCCCcEEEEEEeeeCh--hHHHHHHH-HHh-cCCeEEEEe
Q 023543 199 VLGSDVIYSE---------GAVGDLLDTLLQLCGTQTTIFLAGELRND--SVLEYFLE-AAM-KDFVIGRVE 257 (281)
Q Consensus 199 Iia~d~iy~~---------~~~~~ll~~l~~ll~~~g~~~l~~~~r~~--~~~~~fl~-~~~-~~f~v~~i~ 257 (281)
|++....+.. .....++..+.++|+|||.++++...... ..+...+. .+. .+..+..+.
T Consensus 293 Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~ 364 (396)
T 2as0_A 293 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKMLE 364 (396)
T ss_dssp EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEESS
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEe
Confidence 9975443332 44677888999999999988777654332 22233332 222 355666555
No 192
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.22 E-value=3e-11 Score=111.52 Aligned_cols=110 Identities=17% Similarity=0.019 Sum_probs=83.0
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC-cCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-LIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~-~~~~~fD~I 199 (281)
++++|||+|||+|.+++.++..+.+|+++|+ +.+++.+++|+..|+.. ++.+...|..+..... ..+.+||+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~-----~~~~~~~d~~~~~~~~~~~~~~fD~I 283 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLG-----NVRVLEANAFDLLRRLEKEGERFDLV 283 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCT-----TEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCC-----CceEEECCHHHHHHHHHhcCCCeeEE
Confidence 6789999999999999999988668999999 88999999999999875 4777775543211100 014689999
Q ss_pred EEccccCCC---------CcHHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 200 LGSDVIYSE---------GAVGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 200 ia~d~iy~~---------~~~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
++....+.. ..+..++..+.++|+|||.++++.....
T Consensus 284 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 284 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 974333221 3467788999999999999888865543
No 193
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.22 E-value=2.9e-11 Score=111.84 Aligned_cols=110 Identities=10% Similarity=0.041 Sum_probs=80.3
Q ss_pred ccCCCeEEEECCCcCHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHH-------HhhcCCCCCCceEEEEEecCCCCCC
Q 023543 120 LLHGKKIVELGSGCGLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIE-------NNLRHGDLRGSAVVTELTWGDDPDQ 189 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~-------~n~~~~~~~~~i~~~~l~w~~~~~~ 189 (281)
..++.+|||||||+|.+.+.+|. .++ +|+|+|+ +.+++.|++|++ .+++. ..++.+...|.. +.
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~---~~rVefi~GD~~---~l 244 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK---HAEYTLERGDFL---SE 244 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC---CCEEEEEECCTT---SH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC---CCCeEEEECccc---CC
Confidence 35788999999999999998886 465 5999999 789999988764 33432 146777775433 22
Q ss_pred CcCC--CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 190 DLIQ--PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 190 ~~~~--~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
.+.+ ..||+|+++.+++ .......+..+.+.|+|||++++......
T Consensus 245 p~~d~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 245 EWRERIANTSVIFVNNFAF-GPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp HHHHHHHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred ccccccCCccEEEEccccc-CchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 2222 4699999876654 55666777788899999999987755544
No 194
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.22 E-value=8.8e-11 Score=103.09 Aligned_cols=118 Identities=17% Similarity=0.147 Sum_probs=86.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHh-h-cCCCCCCceEEEEEecCCCCCCCcCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENN-L-RHGDLRGSAVVTELTWGDDPDQDLIQP 194 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n-~-~~~~~~~~i~~~~l~w~~~~~~~~~~~ 194 (281)
.++.+|||+|||+|.+++.++.. +.+|+++|+ +++++.+++|+..+ + .. .++.+...|..+. .+.+.
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~----~~v~~~~~d~~~~---~~~~~ 170 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPP----DNWRLVVSDLADS---ELPDG 170 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCC----TTEEEECSCGGGC---CCCTT
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCC----CcEEEEECchHhc---CCCCC
Confidence 46789999999999999998874 568999999 88999999999887 4 22 3677776554332 23356
Q ss_pred CCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh--cCCe
Q 023543 195 LPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM--KDFV 252 (281)
Q Consensus 195 ~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~--~~f~ 252 (281)
+||+|++. ......+++.+.++|+|||.+++...... ....+++.+. .+|.
T Consensus 171 ~~D~v~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~~~--~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 171 SVDRAVLD-----MLAPWEVLDAVSRLLVAGGVLMVYVATVT--QLSRIVEALRAKQCWT 223 (280)
T ss_dssp CEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHHHSSBC
T ss_pred ceeEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeCCHH--HHHHHHHHHHhcCCcC
Confidence 79999983 22445789999999999999888776432 2344555554 3554
No 195
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.21 E-value=3.7e-11 Score=103.25 Aligned_cols=130 Identities=17% Similarity=0.113 Sum_probs=92.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-CcCC--
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DLIQ-- 193 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~~~-- 193 (281)
.++++|||+|||+|..++.+++. +.+|+++|+ +++++.+++|+..++.. .++.+...+..+.... ...+
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~----~~i~~~~~d~~~~l~~l~~~~~~ 146 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA----EKISLRLGPALATLEQLTQGKPL 146 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEESCHHHHHHHHHTSSSC
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHHHHhcCCC
Confidence 46789999999999999999874 568999999 88999999999988765 4677776543211110 0012
Q ss_pred CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC------------hhHHHHHHHHHhc--CCeEEEEe
Q 023543 194 PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN------------DSVLEYFLEAAMK--DFVIGRVE 257 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~------------~~~~~~fl~~~~~--~f~v~~i~ 257 (281)
.+||+|++... ......+++.+.++|+|||.+++...... ...+..|.+.+.. .|....++
T Consensus 147 ~~fD~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 221 (232)
T 3cbg_A 147 PEFDLIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIP 221 (232)
T ss_dssp CCEEEEEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred CCcCEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEE
Confidence 67999986533 45678899999999999999988644322 1234567776654 45554443
No 196
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.21 E-value=1.5e-10 Score=106.55 Aligned_cols=121 Identities=14% Similarity=0.091 Sum_probs=85.9
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC--EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~--~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.++.+|||+|||+|.+++.++..+. +|+++|+ +.+++.+++|+..+++. .++.+...|..+ ......+||
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~----~~i~~~~~D~~~---~~~~~~~fD 288 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVL----DKIKFIQGDATQ---LSQYVDSVD 288 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCG----GGCEEEECCGGG---GGGTCSCEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCC----CceEEEECChhh---CCcccCCcC
Confidence 4678999999999999999999887 8999999 88999999999999874 467787766543 223346899
Q ss_pred EEEEccccCCCC---------cHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh-cCCeEEEE
Q 023543 198 YVLGSDVIYSEG---------AVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM-KDFVIGRV 256 (281)
Q Consensus 198 ~Iia~d~iy~~~---------~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~-~~f~v~~i 256 (281)
+|+++.+ |... .+..+++.+.++| +++.++++. +...++. .+. .||.+.+.
T Consensus 289 ~Ii~npP-yg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~~---~~~~~~~---~~~~~G~~~~~~ 349 (373)
T 3tm4_A 289 FAISNLP-YGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFITT---EKKAIEE---AIAENGFEIIHH 349 (373)
T ss_dssp EEEEECC-CC------CCHHHHHHHHHHHHHHHE-EEEEEEEES---CHHHHHH---HHHHTTEEEEEE
T ss_pred EEEECCC-CCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEEC---CHHHHHH---HHHHcCCEEEEE
Confidence 9998544 4321 2477888888888 444444443 3333333 333 47876554
No 197
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.20 E-value=3.3e-11 Score=101.92 Aligned_cols=108 Identities=12% Similarity=0.092 Sum_probs=72.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.++.+|||+|||+|..++.+++. +.+|+++|+ +.|++.+.+++..+.... ...++.+...|..+. .+.... |
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~-~~~~v~~~~~d~~~l---~~~~~~-d 100 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKG-GLPNLLYLWATAERL---PPLSGV-G 100 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGT-CCTTEEEEECCSTTC---CSCCCE-E
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhc-CCCceEEEecchhhC---CCCCCC-C
Confidence 46789999999999999999987 678999999 888886555444322110 013678877665432 222333 6
Q ss_pred EEEEccc---cC--CCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 198 YVLGSDV---IY--SEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 198 ~Iia~d~---iy--~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
.|...-. .+ +..+...+++.+.++|+|||.+++...
T Consensus 101 ~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 101 ELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp EEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 6662111 00 112237899999999999999998653
No 198
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.20 E-value=3.5e-11 Score=103.91 Aligned_cols=123 Identities=15% Similarity=0.072 Sum_probs=84.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc------CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC-cC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL------GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-LI 192 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~------g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~-~~ 192 (281)
.++++|||||||+|..++.+++. +++|+++|+ +++++.++ +.. .++.+...|+.+..... ..
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~----~~v~~~~gD~~~~~~l~~~~ 149 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDM----ENITLHQGDCSDLTTFEHLR 149 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGC----TTEEEEECCSSCSGGGGGGS
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccC----CceEEEECcchhHHHHHhhc
Confidence 35689999999999999998876 678999999 88887776 111 36888876654320001 12
Q ss_pred CCCCcEEEEccccCCCCcHHHHHHHHHH-hhCCCcEEEEEEe-----eeChhHHHHHHHHHhcCCeEEEE
Q 023543 193 QPLPDYVLGSDVIYSEGAVGDLLDTLLQ-LCGTQTTIFLAGE-----LRNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 193 ~~~fD~Iia~d~iy~~~~~~~ll~~l~~-ll~~~g~~~l~~~-----~r~~~~~~~fl~~~~~~f~v~~i 256 (281)
+.+||+|+.... + .....++..+.+ +|+|||++++... ..+...+..|++....+|.+...
T Consensus 150 ~~~fD~I~~d~~-~--~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~~~ 216 (236)
T 2bm8_A 150 EMAHPLIFIDNA-H--ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMDML 216 (236)
T ss_dssp SSCSSEEEEESS-C--SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEETT
T ss_pred cCCCCEEEECCc-h--HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEcch
Confidence 347999887544 2 367889999997 9999999988542 12333455666555457776543
No 199
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.20 E-value=2.9e-10 Score=98.02 Aligned_cols=105 Identities=10% Similarity=0.002 Sum_probs=71.3
Q ss_pred ccCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCC
Q 023543 120 LLHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~ 195 (281)
..+|.+|||||||+|..+..+|.. ..+|+++|+ +.+++.+.+.+..+ .++.+...|...........++
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-------~nv~~i~~Da~~~~~~~~~~~~ 146 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-------PNIFPLLADARFPQSYKSVVEN 146 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-------TTEEEEECCTTCGGGTTTTCCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-------CCeEEEEcccccchhhhccccc
Confidence 457899999999999998888864 348999999 77876555444432 2566666553321111112468
Q ss_pred CcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 196 PDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 196 fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
||+|++.-.. +.....+...+.++|+|||.++++..
T Consensus 147 ~D~I~~d~a~--~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 147 VDVLYVDIAQ--PDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp EEEEEECCCC--TTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEEEecCCC--hhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 9999875332 44445566677779999999988753
No 200
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.19 E-value=5.4e-11 Score=111.37 Aligned_cols=109 Identities=21% Similarity=0.246 Sum_probs=81.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-C-CEEEEEec-hhHHHHH-------HHHHHHhhcCCCCCCceEEEEEecCCCCCC-
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-G-AQVILTDL-PDRLRLL-------KKNIENNLRHGDLRGSAVVTELTWGDDPDQ- 189 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-g-~~V~~tD~-~~~l~~~-------~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~- 189 (281)
.++.+|||||||+|.+++.+|+. + .+|+++|+ +.+++.| ++|+..+++. ..++.+... +....
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~---~~nV~~i~g---D~~~~~ 314 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR---LNNVEFSLK---KSFVDN 314 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC---CCCEEEEES---SCSTTC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC---CCceEEEEc---Cccccc
Confidence 46889999999999999999984 5 47999999 7888888 8888887742 135666552 22211
Q ss_pred -Cc--CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 190 -DL--IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 190 -~~--~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
.+ ...+||+|+++.+++ ....+.+++.+.+.|+|||.+++......
T Consensus 315 ~~~~~~~~~FDvIvvn~~l~-~~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 315 NRVAELIPQCDVILVNNFLF-DEDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp HHHHHHGGGCSEEEECCTTC-CHHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred cccccccCCCCEEEEeCccc-cccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 01 136899999877774 45677788999999999999988754433
No 201
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.19 E-value=3e-11 Score=104.23 Aligned_cols=104 Identities=14% Similarity=0.082 Sum_probs=81.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCc-----
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL----- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~----- 191 (281)
.++++|||+|||+|..++.+++. +.+|+++|+ +++++.+++|++.++.. .++.+...++.+..+ .+
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~----~~i~~~~gda~~~l~-~l~~~~~ 143 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE----HKINFIESDAMLALD-NLLQGQE 143 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHH-HHHHSTT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHH-HHHhccC
Confidence 46789999999999999998874 679999999 88999999999988764 467777755432111 11
Q ss_pred CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
...+||+|+... .......+++.+.++|+|||.+++..
T Consensus 144 ~~~~fD~I~~d~---~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 144 SEGSYDFGFVDA---DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp CTTCEEEEEECS---CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCcCEEEECC---chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 146899998642 34567899999999999999987754
No 202
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.18 E-value=1.9e-10 Score=101.42 Aligned_cols=141 Identities=15% Similarity=0.130 Sum_probs=95.6
Q ss_pred chHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHH--cC-CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCce
Q 023543 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAAL--LG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSA 176 (281)
Q Consensus 101 ~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~--~g-~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i 176 (281)
.++.+++..+. ..+|.+|||+|||+|..++.++. .+ .+|+++|+ +.+++.+++|++.++.. ++
T Consensus 70 ~~s~l~~~~l~--------~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-----~v 136 (274)
T 3ajd_A 70 ISSMIPPIVLN--------PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-----NT 136 (274)
T ss_dssp SGGGHHHHHHC--------CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-----SE
T ss_pred HHHHHHHHHhC--------CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-----cE
Confidence 44555555553 24688999999999999988886 34 68999999 88999999999998764 57
Q ss_pred EEEEEecCCCCCCCc--CCCCCcEEEEccccCC------------------CCcHHHHHHHHHHhhCCCcEEEEEEee--
Q 023543 177 VVTELTWGDDPDQDL--IQPLPDYVLGSDVIYS------------------EGAVGDLLDTLLQLCGTQTTIFLAGEL-- 234 (281)
Q Consensus 177 ~~~~l~w~~~~~~~~--~~~~fD~Iia~d~iy~------------------~~~~~~ll~~l~~ll~~~g~~~l~~~~-- 234 (281)
.+...|..+.. ..+ ...+||+|++.-.... ......+++.+.++|+|||.++++...
T Consensus 137 ~~~~~D~~~~~-~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 137 IIINADMRKYK-DYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp EEEESCHHHHH-HHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred EEEeCChHhcc-hhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 77765532211 000 1467999997422211 145688999999999999998776432
Q ss_pred --eChhHHHHHHHHHhcCCeEEEE
Q 023543 235 --RNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 235 --r~~~~~~~fl~~~~~~f~v~~i 256 (281)
.+...++.|++.. .+|++..+
T Consensus 216 ~~ene~~v~~~l~~~-~~~~~~~~ 238 (274)
T 3ajd_A 216 VEENEEVIKYILQKR-NDVELIII 238 (274)
T ss_dssp TTSSHHHHHHHHHHC-SSEEEECC
T ss_pred hHHhHHHHHHHHHhC-CCcEEecC
Confidence 2344555555432 35665544
No 203
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.18 E-value=2.4e-11 Score=104.25 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=70.1
Q ss_pred cCCCeEEEECCCcCHHHHHHHH--cCCEEEEEec-hhH-HHHH---HHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAAL--LGAQVILTDL-PDR-LRLL---KKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQ 193 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~--~g~~V~~tD~-~~~-l~~~---~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~ 193 (281)
.++.+|||||||+|..++.+++ .+.+|+++|+ ++. ++.+ ++|+..++.. ++.+...+..+. +.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-----~v~~~~~d~~~l-----~~ 92 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-----NVVFVIAAAESL-----PF 92 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-----SEEEECCBTTBC-----CG
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-----CeEEEEcCHHHh-----hh
Confidence 3677999999999999999884 5678999999 454 5555 7777776654 677776654332 12
Q ss_pred CCCcEEEEccccCCCC--------cHHHHHHHHHHhhCCCcEEEE
Q 023543 194 PLPDYVLGSDVIYSEG--------AVGDLLDTLLQLCGTQTTIFL 230 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~--------~~~~ll~~l~~ll~~~g~~~l 230 (281)
..+|.|.+..+.+... ....+++.+.++|||||.+++
T Consensus 93 ~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 93 ELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp GGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred hccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 2346555544443221 125688999999999999988
No 204
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.17 E-value=4.7e-10 Score=93.58 Aligned_cols=95 Identities=21% Similarity=0.322 Sum_probs=68.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++++|||+|||+|.+++.++..+. +|+++|+ +.+++.+++|+. ++.+...|..+ + ..+||+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----------~~~~~~~d~~~-----~-~~~~D~ 113 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----------GVNFMVADVSE-----I-SGKYDT 113 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----------TSEEEECCGGG-----C-CCCEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----------CCEEEECcHHH-----C-CCCeeE
Confidence 4678999999999999999998876 6999999 889999998865 24556655432 1 257999
Q ss_pred EEEccccCCCCc--HHHHHHHHHHhhCCCcEEEEEEee
Q 023543 199 VLGSDVIYSEGA--VGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 199 Iia~d~iy~~~~--~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
|++..++++... ...+++.+.+.+ |.+++++..
T Consensus 114 v~~~~p~~~~~~~~~~~~l~~~~~~~---g~~~~~~~~ 148 (200)
T 1ne2_A 114 WIMNPPFGSVVKHSDRAFIDKAFETS---MWIYSIGNA 148 (200)
T ss_dssp EEECCCC-------CHHHHHHHHHHE---EEEEEEEEG
T ss_pred EEECCCchhccCchhHHHHHHHHHhc---CcEEEEEcC
Confidence 999877766432 346777777777 556666543
No 205
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.17 E-value=3.7e-11 Score=102.21 Aligned_cols=105 Identities=15% Similarity=0.072 Sum_probs=78.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-C--CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-g--~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++.+|||+|||+|..+..+++. + .+|+++|+ +.+++.+++|+..++.......++.+...+.... .....+|
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~f 152 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG---YAEEAPY 152 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC---CGGGCCE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC---cccCCCc
Confidence 46789999999999999988875 4 58999999 8899999999988753000013677777665322 1234679
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
|+|++...+. .+++.+.++|+|||.++++...
T Consensus 153 D~i~~~~~~~------~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 153 DAIHVGAAAP------VVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEEEECSBBS------SCCHHHHHTEEEEEEEEEEESC
T ss_pred CEEEECCchH------HHHHHHHHhcCCCcEEEEEEec
Confidence 9999887763 3457888999999999887653
No 206
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.17 E-value=1.6e-10 Score=108.99 Aligned_cols=141 Identities=18% Similarity=0.193 Sum_probs=94.8
Q ss_pred chHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc--C-CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCce
Q 023543 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL--G-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSA 176 (281)
Q Consensus 101 ~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~--g-~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i 176 (281)
.++.+++..+. ..++.+|||+|||+|..++.++.. + .+|+++|+ +.+++.+++|++.++.. ++
T Consensus 246 ~~s~l~~~~l~--------~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-----~v 312 (450)
T 2yxl_A 246 EASAVASIVLD--------PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-----IV 312 (450)
T ss_dssp HHHHHHHHHHC--------CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-----SE
T ss_pred chhHHHHHhcC--------CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-----cE
Confidence 44555555543 346789999999999999888873 3 68999999 88999999999998864 57
Q ss_pred EEEEEecCCCCCCCcCCCCCcEEEE------ccccCCCCcH----------------HHHHHHHHHhhCCCcEEEEEEee
Q 023543 177 VVTELTWGDDPDQDLIQPLPDYVLG------SDVIYSEGAV----------------GDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 177 ~~~~l~w~~~~~~~~~~~~fD~Iia------~d~iy~~~~~----------------~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
.+...|..+.. ..+.+.+||+|++ ..++....+. ..+++.+.++|+|||.++++...
T Consensus 313 ~~~~~D~~~~~-~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 313 KPLVKDARKAP-EIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp EEECSCTTCCS-SSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred EEEEcChhhcc-hhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 77665543321 1133367999995 2223222221 67899999999999998766432
Q ss_pred e----ChhHHHHHHHHHhcCCeEEEE
Q 023543 235 R----NDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 235 r----~~~~~~~fl~~~~~~f~v~~i 256 (281)
- +...++.|++.. .+|....+
T Consensus 392 ~~~~ene~~v~~~l~~~-~~~~~~~~ 416 (450)
T 2yxl_A 392 IFKEENEKNIRWFLNVH-PEFKLVPL 416 (450)
T ss_dssp CCGGGTHHHHHHHHHHC-SSCEECCC
T ss_pred CChhhHHHHHHHHHHhC-CCCEEeec
Confidence 2 334555565432 36776554
No 207
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.17 E-value=7.7e-10 Score=101.01 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=82.2
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
..++|||+|||+|..++.+++. +.+++..|.+++++.+++++...+. +++.+...|..+ . +.+.+|+|
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~-----~rv~~~~gD~~~---~--~~~~~D~~ 248 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEE-----EQIDFQEGDFFK---D--PLPEADLY 248 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--C-----CSEEEEESCTTT---S--CCCCCSEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhccc-----CceeeecCcccc---C--CCCCceEE
Confidence 4679999999999999988875 4578999999999999988765442 578888866432 2 23568999
Q ss_pred EEccccCCCCc--HHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGA--VGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~--~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
+...++|+..+ ...+++.+++.|+|||++++....
T Consensus 249 ~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 249 ILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred EeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 99999998665 467899999999999999988754
No 208
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.16 E-value=1.1e-10 Score=102.94 Aligned_cols=106 Identities=14% Similarity=0.144 Sum_probs=81.8
Q ss_pred CCeEEEECCCc---CHHHHHHHH--cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC--------
Q 023543 123 GKKIVELGSGC---GLVGCIAAL--LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-------- 188 (281)
Q Consensus 123 ~~~VLELGcGt---G~~~i~~a~--~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-------- 188 (281)
..+|||||||+ |.+...+++ .+.+|+++|+ +.|++.+++++..+ .++.+...|..+...
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~-------~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD-------PNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC-------TTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC-------CCeEEEEeeCCCchhhhccchhh
Confidence 47999999999 987766665 3679999999 89999999987432 367777766543100
Q ss_pred CCcCCCCCcEEEEccccCCCCc--HHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 189 QDLIQPLPDYVLGSDVIYSEGA--VGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 189 ~~~~~~~fD~Iia~d~iy~~~~--~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
..+...+||+|++..++++... ...+++.+.+.|+|||.++++....
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred ccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 0122247999999999988554 8999999999999999999887654
No 209
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.16 E-value=1e-10 Score=104.72 Aligned_cols=133 Identities=13% Similarity=-0.000 Sum_probs=89.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHh--hcCCCCCCceEEEEEecCCCCCCCcCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENN--LRHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n--~~~~~~~~~i~~~~l~w~~~~~~~~~~~~ 195 (281)
.++++|||||||+|.++..+++. +.+|+++|+ +.+++.+++++... ... ..++.+...|..+... .....+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~---~~~v~~~~~D~~~~~~-~~~~~~ 169 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLA---DPRATVRVGDGLAFVR-QTPDNT 169 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG---CTTEEEEESCHHHHHH-SSCTTC
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccC---CCcEEEEECcHHHHHH-hccCCc
Confidence 35689999999999999998875 458999999 88999999987431 111 2467777755432110 012468
Q ss_pred CcEEEEccccCCCCc--H--HHHHHHHHHhhCCCcEEEEEEeee--ChhHHHHHHHHHhc-CCeEEEEe
Q 023543 196 PDYVLGSDVIYSEGA--V--GDLLDTLLQLCGTQTTIFLAGELR--NDSVLEYFLEAAMK-DFVIGRVE 257 (281)
Q Consensus 196 fD~Iia~d~iy~~~~--~--~~ll~~l~~ll~~~g~~~l~~~~r--~~~~~~~fl~~~~~-~f~v~~i~ 257 (281)
||+|++....+.... + ..+++.+.++|+|||++++..... .....+.+.+.+++ ||....+.
T Consensus 170 fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 170 YDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp EEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred eeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEE
Confidence 999998443322111 1 688999999999999988865432 23345666777765 79755554
No 210
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.16 E-value=9.9e-11 Score=99.84 Aligned_cols=99 Identities=11% Similarity=0.112 Sum_probs=77.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHH-cC-------CEEEEEec-hhHHHHHHHHHHHhh-----cCCCCCCceEEEEEecCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAAL-LG-------AQVILTDL-PDRLRLLKKNIENNL-----RHGDLRGSAVVTELTWGDD 186 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~-~g-------~~V~~tD~-~~~l~~~~~N~~~n~-----~~~~~~~~i~~~~l~w~~~ 186 (281)
.++.+|||+|||+|..+..+++ .+ .+|+++|+ +++++.+++|+..++ .. ++.+...|..+.
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~-----~v~~~~~d~~~~ 157 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSG-----QLLIVEGDGRKG 157 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHT-----SEEEEESCGGGC
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCC-----ceEEEECCcccC
Confidence 4678999999999999998887 44 48999999 889999999998876 33 677777665431
Q ss_pred CCCCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 187 PDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 187 ~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
.. ...+||+|++...+.+ +.+.+.++|+|||.+++...
T Consensus 158 ~~---~~~~fD~I~~~~~~~~------~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 158 YP---PNAPYNAIHVGAAAPD------TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp CG---GGCSEEEEEECSCBSS------CCHHHHHTEEEEEEEEEEES
T ss_pred CC---cCCCccEEEECCchHH------HHHHHHHHhcCCCEEEEEEe
Confidence 11 1268999999888754 34788899999999988765
No 211
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.16 E-value=1.1e-11 Score=115.44 Aligned_cols=101 Identities=10% Similarity=0.046 Sum_probs=78.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCC--CCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD--PDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~--~~~~~~~~~fD 197 (281)
.++.+|||+|||+|.....++..|.+|+++|+ +.+++.++++ +.. . ....+... ....+.+.+||
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~----~~~------~--~~~~~~~~~~~~l~~~~~~fD 173 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK----GIR------V--RTDFFEKATADDVRRTEGPAN 173 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT----TCC------E--ECSCCSHHHHHHHHHHHCCEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc----CCC------c--ceeeechhhHhhcccCCCCEE
Confidence 36789999999999999999999999999999 7889888765 222 0 11000000 00012347899
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
+|++..++++..+...+++.+.++|+|||.+++...
T Consensus 174 ~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 174 VIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp EEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 999999999999999999999999999999998765
No 212
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.15 E-value=1.4e-11 Score=119.56 Aligned_cols=105 Identities=16% Similarity=0.122 Sum_probs=74.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
-++.+|||+|||+|+++..+|++|++|+|+|. +.+++.|+..+..++.. ++.+...+..+... .....+||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~-----~~~~~~~~~~~~~~-~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDF-----AAEFRVGRIEEVIA-ALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTS-----EEEEEECCHHHHHH-HCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCC-----ceEEEECCHHHHhh-hccCCCccEE
Confidence 35679999999999999999999999999999 88999999999887643 57777655432110 1234689999
Q ss_pred EEccccCCCCcHHHHH--HHHHHhhCCCcEEEEE
Q 023543 200 LGSDVIYSEGAVGDLL--DTLLQLCGTQTTIFLA 231 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll--~~l~~ll~~~g~~~l~ 231 (281)
++..+++|..+...+. ..+.+.+++++..++.
T Consensus 139 ~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 139 IGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp EEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred EECcchhcCCCHHHHHHHHHHHHHhccccceeeE
Confidence 9999998854433221 2233445555554443
No 213
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.14 E-value=9.2e-10 Score=99.54 Aligned_cols=120 Identities=16% Similarity=0.084 Sum_probs=81.3
Q ss_pred ccCCCeEEEECCCcCHHHHHHHHc-C--CEEEEEec-hhHHHHHHHHHHHhh-------cCCCCCCceEEEEEecCCCCC
Q 023543 120 LLHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PDRLRLLKKNIENNL-------RHGDLRGSAVVTELTWGDDPD 188 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a~~-g--~~V~~tD~-~~~l~~~~~N~~~n~-------~~~~~~~~i~~~~l~w~~~~~ 188 (281)
..++.+|||+|||+|.+++.+++. | .+|+++|+ +.+++.+++|+...+ .. ....++.+...|..+..
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~-~~~~~v~~~~~d~~~~~- 180 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVE-EWPDNVDFIHKDISGAT- 180 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSS-CCCCCEEEEESCTTCCC-
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccccc-ccCCceEEEECChHHcc-
Confidence 357889999999999999999986 5 68999999 889999999998643 21 01136777776654321
Q ss_pred CCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh
Q 023543 189 QDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM 248 (281)
Q Consensus 189 ~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~ 248 (281)
..+.+.+||+|++.-. ....+++.+.++|+|||.+++..... .....+++.+.
T Consensus 181 ~~~~~~~fD~V~~~~~-----~~~~~l~~~~~~LkpgG~lv~~~~~~--~~~~~~~~~l~ 233 (336)
T 2b25_A 181 EDIKSLTFDAVALDML-----NPHVTLPVFYPHLKHGGVCAVYVVNI--TQVIELLDGIR 233 (336)
T ss_dssp -------EEEEEECSS-----STTTTHHHHGGGEEEEEEEEEEESSH--HHHHHHHHHHH
T ss_pred cccCCCCeeEEEECCC-----CHHHHHHHHHHhcCCCcEEEEEeCCH--HHHHHHHHHHH
Confidence 1234457999997432 22337888999999999988766532 33344555544
No 214
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.13 E-value=1.8e-10 Score=108.52 Aligned_cols=141 Identities=16% Similarity=0.232 Sum_probs=95.5
Q ss_pred ecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCC
Q 023543 99 MWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRG 174 (281)
Q Consensus 99 ~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~ 174 (281)
--.++.+++..+. ..+|.+|||+|||+|..++.+|.. +.+|+++|+ +.+++.+++|++++++.
T Consensus 90 Qd~ss~l~~~~L~--------~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~----- 156 (456)
T 3m4x_A 90 QEPSAMIVGTAAA--------AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS----- 156 (456)
T ss_dssp CCTTTHHHHHHHC--------CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-----
T ss_pred ECHHHHHHHHHcC--------CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----
Confidence 3455666676664 246889999999999999888863 358999999 88999999999999875
Q ss_pred ceEEEEEecCCCCCCCcCCCCCcEEEEccc------cCC---------CC-------cHHHHHHHHHHhhCCCcEEEEEE
Q 023543 175 SAVVTELTWGDDPDQDLIQPLPDYVLGSDV------IYS---------EG-------AVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 175 ~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~------iy~---------~~-------~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
++.+...|..+.. .....+||+|++... +-. .. ....+++.+.++|+|||+++++.
T Consensus 157 nv~v~~~Da~~l~--~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 157 NAIVTNHAPAELV--PHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp SEEEECCCHHHHH--HHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceEEEeCCHHHhh--hhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5666654422110 012467999987322 111 11 12378889999999999877654
Q ss_pred e-e---eChhHHHHHHHHHhcCCeEEEE
Q 023543 233 E-L---RNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 233 ~-~---r~~~~~~~fl~~~~~~f~v~~i 256 (281)
- . .+...++.|++.. +|.+..+
T Consensus 235 Cs~~~eEne~vv~~~l~~~--~~~l~~~ 260 (456)
T 3m4x_A 235 CTFAPEENEEIISWLVENY--PVTIEEI 260 (456)
T ss_dssp SCCCGGGTHHHHHHHHHHS--SEEEECC
T ss_pred eecccccCHHHHHHHHHhC--CCEEEec
Confidence 2 2 3455666666543 3666555
No 215
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.13 E-value=1e-10 Score=105.55 Aligned_cols=130 Identities=10% Similarity=0.005 Sum_probs=91.3
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHH--hhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIEN--NLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~--n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
++++|||||||+|.+++.+++. +.+|+++|+ +++++.+++|+.. ++.. ..++.+...|+.+... ....+|
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~---~~~v~~~~~D~~~~l~--~~~~~f 190 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYE---DKRVNVFIEDASKFLE--NVTNTY 190 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG---STTEEEEESCHHHHHH--HCCSCE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC---CCcEEEEEccHHHHHh--hcCCCc
Confidence 5689999999999999999875 468999999 8899999999876 3332 2467777755432111 124679
Q ss_pred cEEEEccc--cCCCCc-H-HHHHHHHHHhhCCCcEEEEEEee--eChhHHHHHHHHHhcCCeEEEE
Q 023543 197 DYVLGSDV--IYSEGA-V-GDLLDTLLQLCGTQTTIFLAGEL--RNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 197 D~Iia~d~--iy~~~~-~-~~ll~~l~~ll~~~g~~~l~~~~--r~~~~~~~fl~~~~~~f~v~~i 256 (281)
|+|++.-. +..... . ..+++.+.++|+|||.+++.... .....+..+.+.+++.|.....
T Consensus 191 DvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 256 (321)
T 2pt6_A 191 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEY 256 (321)
T ss_dssp EEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEE
T ss_pred eEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEE
Confidence 99997432 111111 1 78999999999999998886543 2344566777778777764433
No 216
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.12 E-value=2.7e-10 Score=101.62 Aligned_cols=128 Identities=13% Similarity=0.030 Sum_probs=87.0
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHH--hhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIEN--NLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~--n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.+++|||||||+|.++..+++. ..+|+++|+ +.+++.+++|+.. ++.. ..++.+...|..+... ....+|
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~---~~~v~~~~~D~~~~l~--~~~~~f 164 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFD---DPRAEIVIANGAEYVR--KFKNEF 164 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGG---CTTEEEEESCHHHHGG--GCSSCE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccC---CCceEEEECcHHHHHh--hCCCCc
Confidence 5689999999999999999876 358999999 8899999999865 3332 2467777755322111 124679
Q ss_pred cEEEEccccCC-CC-----cHHHHHHHHHHhhCCCcEEEEEEee--eChhHHHHHHHHHhcCCeEEE
Q 023543 197 DYVLGSDVIYS-EG-----AVGDLLDTLLQLCGTQTTIFLAGEL--RNDSVLEYFLEAAMKDFVIGR 255 (281)
Q Consensus 197 D~Iia~d~iy~-~~-----~~~~ll~~l~~ll~~~g~~~l~~~~--r~~~~~~~fl~~~~~~f~v~~ 255 (281)
|+|++ |.... .. ....+++.+.++|+|||.+++.... ..........+.+.+.|....
T Consensus 165 D~Ii~-d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~ 230 (296)
T 1inl_A 165 DVIII-DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITR 230 (296)
T ss_dssp EEEEE-EC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEE
T ss_pred eEEEE-cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceE
Confidence 99996 33211 11 2378899999999999998886433 233445556666666565433
No 217
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.12 E-value=1.5e-10 Score=102.27 Aligned_cols=129 Identities=11% Similarity=0.003 Sum_probs=90.2
Q ss_pred CCCeEEEECCCcCHHHHHHHHc-C-CEEEEEec-hhHHHHHHHHHHHh--hcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 122 HGKKIVELGSGCGLVGCIAALL-G-AQVILTDL-PDRLRLLKKNIENN--LRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~-g-~~V~~tD~-~~~l~~~~~N~~~n--~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
++++|||||||+|.++..+++. + .+|+++|+ +.+++.+++|+... +.. ..++.+...|..+... ....+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~---~~rv~v~~~D~~~~l~--~~~~~f 149 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLD---DPRVDVQVDDGFMHIA--KSENQY 149 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTT---STTEEEEESCSHHHHH--TCCSCE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccC---CCceEEEECcHHHHHh--hCCCCe
Confidence 5789999999999999998886 4 58999999 88999999998653 221 2467777644211111 124689
Q ss_pred cEEEEccccCCCC-----cHHHHHHHHHHhhCCCcEEEEEEee--eChhHHHHHHHHHhcCCeEEEE
Q 023543 197 DYVLGSDVIYSEG-----AVGDLLDTLLQLCGTQTTIFLAGEL--RNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 197 D~Iia~d~iy~~~-----~~~~ll~~l~~ll~~~g~~~l~~~~--r~~~~~~~fl~~~~~~f~v~~i 256 (281)
|+|++ |..+... ....+++.+.++|+|||++++.... .....+....+.+++.|....+
T Consensus 150 D~Ii~-d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 215 (275)
T 1iy9_A 150 DVIMV-DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKL 215 (275)
T ss_dssp EEEEE-SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEE
T ss_pred eEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEE
Confidence 99998 4443211 1368999999999999998876433 2344556667777777864444
No 218
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.11 E-value=2.4e-10 Score=95.46 Aligned_cols=134 Identities=14% Similarity=0.120 Sum_probs=84.9
Q ss_pred hHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEE
Q 023543 102 SGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTEL 181 (281)
Q Consensus 102 ~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l 181 (281)
++..|.+.+... ....++.+|||||||+|..+..+++.+.+|+++|+..+. . ..++.+...
T Consensus 9 a~~KL~ei~~~~----~~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~----------~-----~~~v~~~~~ 69 (191)
T 3dou_A 9 AAFKLEFLLDRY----RVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME----------E-----IAGVRFIRC 69 (191)
T ss_dssp HHHHHHHHHHHH----CCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC----------C-----CTTCEEEEC
T ss_pred HHHHHHHHHHHc----CCCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc----------c-----CCCeEEEEc
Confidence 345555555442 123468899999999999999999988899999994330 1 125677776
Q ss_pred ecCCCCCC-----CcC---CCCCcEEEEccccCCC-----------CcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHH
Q 023543 182 TWGDDPDQ-----DLI---QPLPDYVLGSDVIYSE-----------GAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEY 242 (281)
Q Consensus 182 ~w~~~~~~-----~~~---~~~fD~Iia~d~iy~~-----------~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~ 242 (281)
|..+.... .+. ..+||+|++.-..... .....+++.+.++|+|||.+++... +.+. ...
T Consensus 70 D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~-~~~~-~~~ 147 (191)
T 3dou_A 70 DIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF-QGDM-TND 147 (191)
T ss_dssp CTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-CSTH-HHH
T ss_pred cccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc-CCCC-HHH
Confidence 54432100 011 1389999984322111 1235678888999999999876544 3332 345
Q ss_pred HHHHHhcCCeEEEE
Q 023543 243 FLEAAMKDFVIGRV 256 (281)
Q Consensus 243 fl~~~~~~f~v~~i 256 (281)
++..+...|.-..+
T Consensus 148 ~~~~l~~~F~~v~~ 161 (191)
T 3dou_A 148 FIAIWRKNFSSYKI 161 (191)
T ss_dssp HHHHHGGGEEEEEE
T ss_pred HHHHHHHhcCEEEE
Confidence 77777777864444
No 219
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.09 E-value=9.5e-11 Score=106.40 Aligned_cols=127 Identities=12% Similarity=0.002 Sum_probs=87.9
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHh--hcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENN--LRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n--~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
++++|||||||+|.+++.+++. +.+|+++|+ +.+++.+++|+... +.. ..++.+...|+.+... ...+.+|
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~---~~rv~~~~~D~~~~l~-~~~~~~f 195 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE---DPRVNLVIGDGVAFLK-NAAEGSY 195 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG---STTEEEEESCHHHHHH-TSCTTCE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC---CCcEEEEECCHHHHHH-hccCCCc
Confidence 5689999999999999999875 468999999 88999999998763 332 1467877766432111 1124689
Q ss_pred cEEEEccc--cCCCCc--HHHHHHHHHHhhCCCcEEEEEEee--eChhHHHHHHHHHhcCCe
Q 023543 197 DYVLGSDV--IYSEGA--VGDLLDTLLQLCGTQTTIFLAGEL--RNDSVLEYFLEAAMKDFV 252 (281)
Q Consensus 197 D~Iia~d~--iy~~~~--~~~ll~~l~~ll~~~g~~~l~~~~--r~~~~~~~fl~~~~~~f~ 252 (281)
|+|++.-. ...... ...+++.+.++|+|||.+++.... .....+...++.+++.|.
T Consensus 196 DlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 257 (334)
T 1xj5_A 196 DAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFK 257 (334)
T ss_dssp EEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCS
T ss_pred cEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCc
Confidence 99997322 221121 478999999999999998885322 233334455566666665
No 220
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.09 E-value=1.5e-10 Score=102.25 Aligned_cols=108 Identities=13% Similarity=0.138 Sum_probs=77.2
Q ss_pred CCCeEEEECCCcCH----HHHHHHHc-C-----CEEEEEec-hhHHHHHHHHHHHh----h-------------c---C-
Q 023543 122 HGKKIVELGSGCGL----VGCIAALL-G-----AQVILTDL-PDRLRLLKKNIENN----L-------------R---H- 169 (281)
Q Consensus 122 ~~~~VLELGcGtG~----~~i~~a~~-g-----~~V~~tD~-~~~l~~~~~N~~~n----~-------------~---~- 169 (281)
++.+|+|+|||||. +++.++.. + .+|+|||+ ++||+.|++|+... + . .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 34699999999997 66666653 3 58999999 88999999885210 0 0 0
Q ss_pred ---C--CCCCceEEEEEecCCCCCCCcC-CCCCcEEEEccccCC--CCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 170 ---G--DLRGSAVVTELTWGDDPDQDLI-QPLPDYVLGSDVIYS--EGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 170 ---~--~~~~~i~~~~l~w~~~~~~~~~-~~~fD~Iia~d~iy~--~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
+ ....++.+...++.+. .++ ..+||+|+|..++.+ +.....+++.+.+.|+|||.+++..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~---~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK---QYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS---SCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred ceeechhhcccCeEEecccCCC---CCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 0 0013578888776542 122 467999999888644 3445899999999999999988753
No 221
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.08 E-value=4.8e-10 Score=99.25 Aligned_cols=131 Identities=12% Similarity=-0.042 Sum_probs=87.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC-CEEEEEec-hhHHHHHHHHHHHh--hc----CCCCCCceEEEEEecCCCCCCCcC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENN--LR----HGDLRGSAVVTELTWGDDPDQDLI 192 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g-~~V~~tD~-~~~l~~~~~N~~~n--~~----~~~~~~~i~~~~l~w~~~~~~~~~ 192 (281)
.++++|||||||+|.++..+++.+ .+|+++|+ +.+++.+++|+ .. +. ......++.+...|..+... .
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~--~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIK--N- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHH--H-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhc--c-
Confidence 357899999999999999988874 48999999 88999999998 33 21 00012467777644211110 1
Q ss_pred CCCCcEEEEccccCCC---Cc--HHHHHHHHHHhhCCCcEEEEEEee--eChhHHHHHHHHHhcCCeEEEE
Q 023543 193 QPLPDYVLGSDVIYSE---GA--VGDLLDTLLQLCGTQTTIFLAGEL--RNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 193 ~~~fD~Iia~d~iy~~---~~--~~~ll~~l~~ll~~~g~~~l~~~~--r~~~~~~~fl~~~~~~f~v~~i 256 (281)
..+||+|++ |..+.. .. ...+++.+.++|+|||++++.... ..........+.+...|.....
T Consensus 150 ~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~ 219 (281)
T 1mjf_A 150 NRGFDVIIA-DSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYY 219 (281)
T ss_dssp CCCEEEEEE-ECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEE
T ss_pred cCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEE
Confidence 467999997 333221 11 377899999999999998876443 2344455566666666754443
No 222
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.08 E-value=1.4e-10 Score=107.00 Aligned_cols=101 Identities=21% Similarity=0.186 Sum_probs=77.4
Q ss_pred CCCeEEEECCCcCHHHHHHHHc-C-CEEEEEec-hhHHHHHHHHHHHh---------------hcCCCCCCceEEEEEec
Q 023543 122 HGKKIVELGSGCGLVGCIAALL-G-AQVILTDL-PDRLRLLKKNIENN---------------LRHGDLRGSAVVTELTW 183 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~-g-~~V~~tD~-~~~l~~~~~N~~~n---------------~~~~~~~~~i~~~~l~w 183 (281)
++.+|||+|||+|..|+.+++. + .+|+++|+ +++++.+++|++.| ++. ++.+...|.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-----~i~v~~~Da 121 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-----TIVINHDDA 121 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-----EEEEEESCH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-----ceEEEcCcH
Confidence 6889999999999999999985 4 58999999 88999999999999 543 366666443
Q ss_pred CCCCCCCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 184 GDDPDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 184 ~~~~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
.+.... ...+||+|+ .|..+. ...++..+.++++++|.+++++.
T Consensus 122 ~~~~~~--~~~~fD~I~-lDP~~~---~~~~l~~a~~~lk~gG~l~vt~t 165 (378)
T 2dul_A 122 NRLMAE--RHRYFHFID-LDPFGS---PMEFLDTALRSAKRRGILGVTAT 165 (378)
T ss_dssp HHHHHH--STTCEEEEE-ECCSSC---CHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHh--ccCCCCEEE-eCCCCC---HHHHHHHHHHhcCCCCEEEEEee
Confidence 221110 135799999 566432 36788888999999999888763
No 223
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.08 E-value=1.4e-09 Score=101.93 Aligned_cols=162 Identities=19% Similarity=0.099 Sum_probs=101.9
Q ss_pred cchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcC--CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCce
Q 023543 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSA 176 (281)
Q Consensus 100 W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g--~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i 176 (281)
..++..++..+. ..++.+|||+|||+|..++.++..+ .+|+++|+ +.+++.+++|+..++.. +
T Consensus 232 d~~s~~~~~~l~--------~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~------~ 297 (429)
T 1sqg_A 232 DASAQGCMTWLA--------PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK------A 297 (429)
T ss_dssp CHHHHTHHHHHC--------CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCC------C
T ss_pred CHHHHHHHHHcC--------CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCC------e
Confidence 445555566553 2468899999999999999888755 58999999 88999999999998753 4
Q ss_pred EEEEEecCCCCCCCcCCCCCcEEEEc------cccCCCCc----------------HHHHHHHHHHhhCCCcEEEEEEee
Q 023543 177 VVTELTWGDDPDQDLIQPLPDYVLGS------DVIYSEGA----------------VGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 177 ~~~~l~w~~~~~~~~~~~~fD~Iia~------d~iy~~~~----------------~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
.+...|..+.. ..+...+||+|++. .++..... ...+++.+.++|+|||.++++.-.
T Consensus 298 ~~~~~D~~~~~-~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 298 TVKQGDGRYPS-QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp EEEECCTTCTH-HHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred EEEeCchhhch-hhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 55554433211 11234679999962 22222221 157888899999999998876522
Q ss_pred ----eChhHHHHHHHHHhcCCeEEEE------ecCCCCCCCCCCcEEEEEEEe
Q 023543 235 ----RNDSVLEYFLEAAMKDFVIGRV------EQTQWHPDYCSPRVVVYILVK 277 (281)
Q Consensus 235 ----r~~~~~~~fl~~~~~~f~v~~i------~~~~~~~~~~~~~~~i~~~~~ 277 (281)
.+...+..|+... .+|.+..- ....+.......+|.+-.++|
T Consensus 377 ~~~~ene~~v~~~l~~~-~~~~~~~~~~~~~~~~~~~P~~~~~dGff~a~l~k 428 (429)
T 1sqg_A 377 VLPEENSLQIKAFLQRT-ADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 (429)
T ss_dssp CCGGGTHHHHHHHHHHC-TTCEECSSBCSSSBSEEECCCTTSCCSEEEEEEEC
T ss_pred CChhhHHHHHHHHHHhC-CCCEEeCCCCCCCCeEEECCCCCCCCceEEEEEEE
Confidence 2344555566432 35654320 001122222345777666655
No 224
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.07 E-value=9e-10 Score=95.86 Aligned_cols=124 Identities=11% Similarity=0.087 Sum_probs=85.0
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
...+|||||||+|.+++.++.. .++|+++|+ +.+++.+++|+..|+.. ..+...| ... ..+..+||+
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~------~~~~v~D---~~~-~~p~~~~Dv 201 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP------HRTNVAD---LLE-DRLDEPADV 201 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC------EEEEECC---TTT-SCCCSCCSE
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC------ceEEEee---ecc-cCCCCCcch
Confidence 4679999999999999998875 458999999 88999999999999865 4444433 222 234578999
Q ss_pred EEEccccCCCCcH--HHHHHHHHHhhCCCcEEEEEEee-----eChh---HHHHHH-HHHh-cCCeEEEEe
Q 023543 199 VLGSDVIYSEGAV--GDLLDTLLQLCGTQTTIFLAGEL-----RNDS---VLEYFL-EAAM-KDFVIGRVE 257 (281)
Q Consensus 199 Iia~d~iy~~~~~--~~ll~~l~~ll~~~g~~~l~~~~-----r~~~---~~~~fl-~~~~-~~f~v~~i~ 257 (281)
+++..++..-+.. ...+ .+.+.|+++|++ ++.+. |+.. ..+..+ ..+. .++.+.++.
T Consensus 202 aL~lkti~~Le~q~kg~g~-~ll~aL~~~~vv-VSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~ 270 (281)
T 3lcv_B 202 TLLLKTLPCLETQQRGSGW-EVIDIVNSPNIV-VTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLE 270 (281)
T ss_dssp EEETTCHHHHHHHSTTHHH-HHHHHSSCSEEE-EEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEE-EeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeee
Confidence 9999998763322 2344 677778888875 56555 3322 233333 3344 478777775
No 225
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.07 E-value=2.5e-09 Score=101.51 Aligned_cols=133 Identities=13% Similarity=0.128 Sum_probs=89.1
Q ss_pred chHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCce
Q 023543 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSA 176 (281)
Q Consensus 101 ~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i 176 (281)
.++.+++..|.-. ..+|.+|||+|||+|..++.+|.. +.+|+++|+ +.+++.+++|+++++.. ++
T Consensus 102 ~~s~l~~~~L~~~------~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-----nv 170 (479)
T 2frx_A 102 ASSMLPVAALFAD------GNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-----NV 170 (479)
T ss_dssp HHHHHHHHHHTTT------TCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-----SE
T ss_pred HHHHHHHHHhCcc------cCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----cE
Confidence 4455555655311 126889999999999999988874 368999999 88999999999999865 56
Q ss_pred EEEEEecCCCCCCCcCCCCCcEEEEcc------ccCC-CC---------------cHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 177 VVTELTWGDDPDQDLIQPLPDYVLGSD------VIYS-EG---------------AVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 177 ~~~~l~w~~~~~~~~~~~~fD~Iia~d------~iy~-~~---------------~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
.+...|..+.. .....+||+|++.- ++.. ++ ....+++.+.++|+|||+++++.-.
T Consensus 171 ~~~~~D~~~~~--~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 171 ALTHFDGRVFG--AAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp EEECCCSTTHH--HHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEeCCHHHhh--hhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 66664432110 01245799999721 1111 11 1357888999999999998775432
Q ss_pred ----eChhHHHHHHHH
Q 023543 235 ----RNDSVLEYFLEA 246 (281)
Q Consensus 235 ----r~~~~~~~fl~~ 246 (281)
.+...++.|++.
T Consensus 249 ~~~~Ene~vv~~~l~~ 264 (479)
T 2frx_A 249 LNQEENEAVCLWLKET 264 (479)
T ss_dssp CSSTTTHHHHHHHHHH
T ss_pred CCcccCHHHHHHHHHH
Confidence 234455666654
No 226
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.07 E-value=1.9e-10 Score=101.98 Aligned_cols=132 Identities=11% Similarity=-0.002 Sum_probs=90.2
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
++++|||||||+|..+..+++. +.+|+++|+ +.+++.+++++..++... ...++.+...|..+... ....+||+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~-~~~~v~~~~~D~~~~l~--~~~~~fD~ 154 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGY-EDKRVNVFIEDASKFLE--NVTNTYDV 154 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGG-GSTTEEEEESCHHHHHH--HCCSCEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhcccc-CCCcEEEEECChHHHHH--hCCCCceE
Confidence 5689999999999999998875 358999999 889999999876542110 02467777655322111 12468999
Q ss_pred EEEc--cccCCCCcH--HHHHHHHHHhhCCCcEEEEEEee--eChhHHHHHHHHHhcCCeEEEE
Q 023543 199 VLGS--DVIYSEGAV--GDLLDTLLQLCGTQTTIFLAGEL--RNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 199 Iia~--d~iy~~~~~--~~ll~~l~~ll~~~g~~~l~~~~--r~~~~~~~fl~~~~~~f~v~~i 256 (281)
|++. +.......+ ..+++.+.++|+|||.+++.... .....+..+.+.+++.|....+
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 218 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEY 218 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEE
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEE
Confidence 9983 222112222 78999999999999998877543 2344556677777777864433
No 227
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.07 E-value=2.5e-10 Score=102.34 Aligned_cols=129 Identities=11% Similarity=-0.018 Sum_probs=85.4
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC--CEEEEEec-hhHHHHHHHHHHH--hhcCCCCCCceEEEEEecCCCCCCCcCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIEN--NLRHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g--~~V~~tD~-~~~l~~~~~N~~~--n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~ 195 (281)
.++++|||||||+|.+++.+++.. .+|+++|+ +.+++.+++|+.. ++.. ..++.+...|..+... ..+.+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~---~~rv~v~~~Da~~~l~--~~~~~ 168 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS---SSKLTLHVGDGFEFMK--QNQDA 168 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG---CTTEEEEESCHHHHHH--TCSSC
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccC---CCcEEEEECcHHHHHh--hCCCC
Confidence 356899999999999999998864 58999999 8899999999876 3332 1467777644321111 12467
Q ss_pred CcEEEEccccCCC-----CcHHHHHHHHHHhhCCCcEEEEEEee--eChhHHHHHHHHHhcCCeEEE
Q 023543 196 PDYVLGSDVIYSE-----GAVGDLLDTLLQLCGTQTTIFLAGEL--RNDSVLEYFLEAAMKDFVIGR 255 (281)
Q Consensus 196 fD~Iia~d~iy~~-----~~~~~ll~~l~~ll~~~g~~~l~~~~--r~~~~~~~fl~~~~~~f~v~~ 255 (281)
||+|++. ..... .....+++.+.++|+|||++++.... ..........+.+.+-|....
T Consensus 169 fD~Ii~d-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~ 234 (304)
T 2o07_A 169 FDVIITD-SSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVA 234 (304)
T ss_dssp EEEEEEE-CC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEE
T ss_pred ceEEEEC-CCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCce
Confidence 9999973 32211 12357899999999999998876533 233334444455555565333
No 228
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.05 E-value=3.1e-10 Score=102.07 Aligned_cols=125 Identities=10% Similarity=0.000 Sum_probs=86.3
Q ss_pred CeEEEECCCcCHHHHHHHH--cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEE
Q 023543 124 KKIVELGSGCGLVGCIAAL--LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVL 200 (281)
Q Consensus 124 ~~VLELGcGtG~~~i~~a~--~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Ii 200 (281)
.+|||||||+|.++..+++ .+.+|+++|+ +.+++.+++++..+. ..++.+...|..+... ...+.+||+|+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-----~~rv~v~~~Da~~~l~-~~~~~~fDvIi 164 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-----APRVKIRVDDARMVAE-SFTPASRDVII 164 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-----TTTEEEEESCHHHHHH-TCCTTCEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-----CCceEEEECcHHHHHh-hccCCCCCEEE
Confidence 3999999999999998887 4679999999 889999999876532 2467777654321110 12346899999
Q ss_pred Ecc--ccCCCCc--HHHHHHHHHHhhCCCcEEEEEEeeeCh-hHHHHHHHHHhcCCeEE
Q 023543 201 GSD--VIYSEGA--VGDLLDTLLQLCGTQTTIFLAGELRND-SVLEYFLEAAMKDFVIG 254 (281)
Q Consensus 201 a~d--~iy~~~~--~~~ll~~l~~ll~~~g~~~l~~~~r~~-~~~~~fl~~~~~~f~v~ 254 (281)
+.- ..+.+.. ...+++.++++|+|+|++++....... ..+...+..+.+.|.-.
T Consensus 165 ~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v 223 (317)
T 3gjy_A 165 RDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHV 223 (317)
T ss_dssp ECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEE
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCce
Confidence 732 1122222 278999999999999998776553322 33456677777777533
No 229
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.05 E-value=3.7e-10 Score=98.48 Aligned_cols=96 Identities=9% Similarity=-0.008 Sum_probs=73.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.++.+|||+|||+|..+..+++. +.+|+++|+ +.+++.++++. .++.+...++.+ ..+.+.+||
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~---~~~~~~~fD 150 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----------PQVTFCVASSHR---LPFSDTSMD 150 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTS---CSBCTTCEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcchhh---CCCCCCcee
Confidence 36789999999999999988885 789999999 88899888763 134555555432 234457899
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
+|++..+. .+++.+.++|+|||.+++......
T Consensus 151 ~v~~~~~~-------~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 151 AIIRIYAP-------CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp EEEEESCC-------CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEEEeCCh-------hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 99987652 357889999999999988876543
No 230
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.04 E-value=1.1e-09 Score=90.69 Aligned_cols=115 Identities=15% Similarity=0.079 Sum_probs=72.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-C----------CEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEE-EEecCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-G----------AQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVT-ELTWGDDPD 188 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-g----------~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~-~l~w~~~~~ 188 (281)
.++.+|||||||+|.+++.+++. + .+|+++|++.+. .. .++.+. ..|+.+...
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------~~-----~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------PL-----EGATFLCPADVTDPRT 85 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------CC-----TTCEEECSCCTTSHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------cC-----CCCeEEEeccCCCHHH
Confidence 46889999999999999999875 4 689999994421 01 234444 333221100
Q ss_pred -----CCcCCCCCcEEEEccccCCCC----cH-------HHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhcCCe
Q 023543 189 -----QDLIQPLPDYVLGSDVIYSEG----AV-------GDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMKDFV 252 (281)
Q Consensus 189 -----~~~~~~~fD~Iia~d~iy~~~----~~-------~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~~f~ 252 (281)
..+.+.+||+|++....+... +. ..+++.+.++|+|||.+++....... ...+...+...|.
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~l~~~f~ 163 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ--SRRLQRRLTEEFQ 163 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG--GHHHHHHHHHHEE
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc--HHHHHHHHHHHhc
Confidence 002235799999865433211 11 47889999999999998887543322 2345555555554
No 231
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.04 E-value=7.8e-10 Score=104.41 Aligned_cols=140 Identities=19% Similarity=0.198 Sum_probs=92.8
Q ss_pred cchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCc
Q 023543 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGS 175 (281)
Q Consensus 100 W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~ 175 (281)
-.++.+++..+. ..+|.+|||+|||+|..++.+|.. ..+|+++|+ +.+++.+++|++++++.
T Consensus 87 d~ss~l~a~~L~--------~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~------ 152 (464)
T 3m6w_A 87 EPSAQAVGVLLD--------PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP------ 152 (464)
T ss_dssp CTTTHHHHHHHC--------CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC------
T ss_pred CHHHHHHHHhcC--------cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe------
Confidence 445666666653 246889999999999999988864 258999999 88999999999998753
Q ss_pred eEEEEEecCCCCCCCcCCCCCcEEEEc------cccCC-C--------Cc-------HHHHHHHHHHhhCCCcEEEEEEe
Q 023543 176 AVVTELTWGDDPDQDLIQPLPDYVLGS------DVIYS-E--------GA-------VGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 176 i~~~~l~w~~~~~~~~~~~~fD~Iia~------d~iy~-~--------~~-------~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
+.+...|..+.. .....+||+|++. .++.. + .. ...+++.+.++|+|||+++++.-
T Consensus 153 v~~~~~Da~~l~--~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 153 LAVTQAPPRALA--EAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp CEEECSCHHHHH--HHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred EEEEECCHHHhh--hhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 444443321110 0124689999851 11111 1 11 27788899999999999876532
Q ss_pred -e---eChhHHHHHHHHHhcCCeEEEE
Q 023543 234 -L---RNDSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 234 -~---r~~~~~~~fl~~~~~~f~v~~i 256 (281)
. .+...++.|++.. .+|.+..+
T Consensus 231 s~~~eEne~vv~~~l~~~-~~~~l~~~ 256 (464)
T 3m6w_A 231 TFAPEENEGVVAHFLKAH-PEFRLEDA 256 (464)
T ss_dssp CCCGGGTHHHHHHHHHHC-TTEEEECC
T ss_pred cCchhcCHHHHHHHHHHC-CCcEEEec
Confidence 2 3445566666432 35766655
No 232
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.04 E-value=8.3e-10 Score=99.27 Aligned_cols=129 Identities=10% Similarity=0.018 Sum_probs=88.4
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHH-hh--cCCCCCCceEEEEEecCCCCCCCcCCCC
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIEN-NL--RHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~-n~--~~~~~~~~i~~~~l~w~~~~~~~~~~~~ 195 (281)
++++|||||||+|..+..+++. +.+|+++|+ +.+++.+++|+.. |. .. ..++.+...|..+... ....+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~---~~~v~~~~~D~~~~l~--~~~~~ 151 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD---DPRAVLVIDDARAYLE--RTEER 151 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG---CTTEEEEESCHHHHHH--HCCCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccccc---CCceEEEEchHHHHHH--hcCCC
Confidence 5689999999999999998875 468999999 8899999999864 22 21 1467777655322111 12467
Q ss_pred CcEEEEccccCC---C--Cc--HHHHHHHHHHhhCCCcEEEEEEeee---ChhHHHHHHHHHhcCCeEEE
Q 023543 196 PDYVLGSDVIYS---E--GA--VGDLLDTLLQLCGTQTTIFLAGELR---NDSVLEYFLEAAMKDFVIGR 255 (281)
Q Consensus 196 fD~Iia~d~iy~---~--~~--~~~ll~~l~~ll~~~g~~~l~~~~r---~~~~~~~fl~~~~~~f~v~~ 255 (281)
||+|++.-.... . .. ...+++.+.++|+|||++++..... +........+.+++.|....
T Consensus 152 fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~ 221 (314)
T 1uir_A 152 YDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVR 221 (314)
T ss_dssp EEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEE
T ss_pred ccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceE
Confidence 999998533322 0 11 4789999999999999988765432 23445566667777775433
No 233
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.04 E-value=1.5e-09 Score=99.61 Aligned_cols=96 Identities=16% Similarity=0.090 Sum_probs=74.7
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.+.+|||||||+|..++.+++. +.+++++|++.+++.++++ .++.+...|..+ .++. .|+|
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-----------~~v~~~~~d~~~----~~p~--~D~v 265 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAF-----------SGVEHLGGDMFD----GVPK--GDAI 265 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCC-----------TTEEEEECCTTT----CCCC--CSEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhc-----------CCCEEEecCCCC----CCCC--CCEE
Confidence 4679999999999999988873 5689999998887665531 367788766543 2222 2999
Q ss_pred EEccccCCCCc--HHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGA--VGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~--~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
++..++|+..+ ...+++.+++.|+|||.+++....
T Consensus 266 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 266 FIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp EEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 99999987554 458999999999999999887644
No 234
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.02 E-value=2.4e-10 Score=101.04 Aligned_cols=140 Identities=14% Similarity=-0.041 Sum_probs=82.3
Q ss_pred chHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEechhHHHHHHHHHHHhhcCC-CCCCceEEE
Q 023543 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDLPDRLRLLKKNIENNLRHG-DLRGSAVVT 179 (281)
Q Consensus 101 ~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~~~~l~~~~~N~~~n~~~~-~~~~~i~~~ 179 (281)
.++..|.+.+.. ....++++|||||||+|..+..+++. .+|+++|+..++..++++ .... ....++.+.
T Consensus 66 R~a~KL~~i~~~-----~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~m~~~a~~~----~~~~~~~~~~v~~~ 135 (276)
T 2wa2_A 66 RGTAKLAWIDER-----GGVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYTLGTSGHEK----PRLVETFGWNLITF 135 (276)
T ss_dssp HHHHHHHHHHHT-----TSCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEECCCCTTSCC----CCCCCCTTGGGEEE
T ss_pred hHHHHHHHHHHc-----CCCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECchhhhhhhhc----hhhhhhcCCCeEEE
Confidence 345555555443 12346889999999999999999988 789999994453222211 1000 000145555
Q ss_pred --EEecCCCCCCCcCCCCCcEEEEccccCCCCc----HH---HHHHHHHHhhCCCc--EEEEEEeeeChhHHHHHHHHHh
Q 023543 180 --ELTWGDDPDQDLIQPLPDYVLGSDVIYSEGA----VG---DLLDTLLQLCGTQT--TIFLAGELRNDSVLEYFLEAAM 248 (281)
Q Consensus 180 --~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~----~~---~ll~~l~~ll~~~g--~~~l~~~~r~~~~~~~fl~~~~ 248 (281)
..|..+ +++.+||+|++.-. +.... .. .+++.+.++|+||| .+++............++..+.
T Consensus 136 ~~~~D~~~-----l~~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~~~~~~~l~~l~ 209 (276)
T 2wa2_A 136 KSKVDVTK-----MEPFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYSCDVLEALMKMQ 209 (276)
T ss_dssp ECSCCGGG-----CCCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCSHHHHHHHHHHH
T ss_pred eccCcHhh-----CCCCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCchhHHHHHHHHH
Confidence 333221 33568999998654 33211 11 36888999999999 8776433322222234666666
Q ss_pred cCCeEEEE
Q 023543 249 KDFVIGRV 256 (281)
Q Consensus 249 ~~f~v~~i 256 (281)
..|....+
T Consensus 210 ~~f~~v~v 217 (276)
T 2wa2_A 210 ARFGGGLI 217 (276)
T ss_dssp HHHCCEEE
T ss_pred HHcCCEEE
Confidence 66654444
No 235
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.01 E-value=2.6e-10 Score=102.64 Aligned_cols=127 Identities=10% Similarity=-0.041 Sum_probs=83.0
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHh--hcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENN--LRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n--~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.+++|||||||+|.++..+++. +.+|+++|+ +.+++.+++|+... +.. ..++.+...|..+... ....+|
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~---~~rv~~~~~D~~~~l~--~~~~~f 182 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFS---HPKLDLFCGDGFEFLK--NHKNEF 182 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGG---CTTEEEECSCHHHHHH--HCTTCE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccC---CCCEEEEEChHHHHHH--hcCCCc
Confidence 5689999999999999999875 468999999 88999999998653 321 2467776654322111 124679
Q ss_pred cEEEEccccCC---CCc-H-HHHHHHHHHhhCCCcEEEEEEee--eChhHHHHHHHHHhcCCeEE
Q 023543 197 DYVLGSDVIYS---EGA-V-GDLLDTLLQLCGTQTTIFLAGEL--RNDSVLEYFLEAAMKDFVIG 254 (281)
Q Consensus 197 D~Iia~d~iy~---~~~-~-~~ll~~l~~ll~~~g~~~l~~~~--r~~~~~~~fl~~~~~~f~v~ 254 (281)
|+|++. .... ... . ..+++.+.++|+|||++++.... ..........+.+++-|...
T Consensus 183 D~Ii~d-~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v 246 (314)
T 2b2c_A 183 DVIITD-SSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAV 246 (314)
T ss_dssp EEEEEC-CC-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEE
T ss_pred eEEEEc-CCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcc
Confidence 999973 3211 111 2 78999999999999998876422 23333444555555556533
No 236
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.01 E-value=7.8e-10 Score=95.31 Aligned_cols=101 Identities=11% Similarity=-0.025 Sum_probs=72.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
....+|||||||+|.+++.+. .+.+|+++|+ +.+++.+++|+..++.. ..+...| ..... ...+||+|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~~------~~~~v~D---~~~~~-~~~~~Dvv 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDWD------FTFALQD---VLCAP-PAEAGDLA 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTCE------EEEEECC---TTTSC-CCCBCSEE
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCCC------ceEEEee---cccCC-CCCCcchH
Confidence 357799999999999999888 6678999999 88999999999998743 4455433 22222 34589999
Q ss_pred EEccccCCCCc--HHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGA--VGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~--~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
++..+++.-+. -..+. .+.+.|++++++ ++.+.
T Consensus 173 Lllk~lh~LE~q~~~~~~-~ll~aL~~~~vv-VsfPt 207 (253)
T 3frh_A 173 LIFKLLPLLEREQAGSAM-ALLQSLNTPRMA-VSFPT 207 (253)
T ss_dssp EEESCHHHHHHHSTTHHH-HHHHHCBCSEEE-EEEEC
T ss_pred HHHHHHHHhhhhchhhHH-HHHHHhcCCCEE-EEcCh
Confidence 99988876322 12233 455577777654 56653
No 237
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.00 E-value=2.5e-10 Score=105.58 Aligned_cols=103 Identities=13% Similarity=0.053 Sum_probs=77.8
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCc-eEEEEEecCCCCCCCcCCCCC
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGS-AVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~-i~~~~l~w~~~~~~~~~~~~f 196 (281)
+|.+|||++||+|..|+.++.. |+ +|+++|+ +.+++.+++|++.|++. ++ +.+...|..+..... ...+|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~----~~~v~v~~~Da~~~l~~~-~~~~f 126 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP----EDRYEIHGMEANFFLRKE-WGFGF 126 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC----GGGEEEECSCHHHHHHSC-CSSCE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC----CceEEEEeCCHHHHHHHh-hCCCC
Confidence 5789999999999999999884 54 6999999 88999999999999875 33 776664432111101 13579
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
|+|+. |. |. ....++..+.++++++|.+++++.
T Consensus 127 D~V~l-DP-~g--~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 127 DYVDL-DP-FG--TPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp EEEEE-CC-SS--CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cEEEE-CC-Cc--CHHHHHHHHHHHhCCCCEEEEEec
Confidence 99885 55 32 235688999999999999988874
No 238
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.00 E-value=3.3e-09 Score=96.30 Aligned_cols=102 Identities=9% Similarity=-0.052 Sum_probs=75.6
Q ss_pred CCCeEEEECCCcCHHHHHHHHcC-------CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCC
Q 023543 122 HGKKIVELGSGCGLVGCIAALLG-------AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQ 193 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g-------~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~ 193 (281)
++.+|||+|||+|.+.+.+++.. .+|+|+|+ +.+++.++.|+..++.. +.+...|.. .. ...
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~------~~i~~~D~l---~~-~~~ 199 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQK------MTLLHQDGL---AN-LLV 199 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCC------CEEEESCTT---SC-CCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCC------ceEEECCCC---Cc-ccc
Confidence 56799999999999988887643 57999999 88999999999988653 444553332 21 234
Q ss_pred CCCcEEEEccccCCC-C-----------------cHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 194 PLPDYVLGSDVIYSE-G-----------------AVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~-~-----------------~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
.+||+|+++.++... . ....+++.+.++|+|+|++++..+
T Consensus 200 ~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 200 DPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp CCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 689999998774221 1 113688999999999999887764
No 239
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.98 E-value=4.5e-10 Score=98.73 Aligned_cols=136 Identities=13% Similarity=-0.025 Sum_probs=79.7
Q ss_pred chHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEechhHHHHHHHHHHHhhcCCC-CCCceEEE
Q 023543 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDLPDRLRLLKKNIENNLRHGD-LRGSAVVT 179 (281)
Q Consensus 101 ~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~~~~l~~~~~N~~~n~~~~~-~~~~i~~~ 179 (281)
.++..|.+.+... ...++++|||||||+|..+..+++. .+|+++|+..++..++++ ..... ...++.+.
T Consensus 58 R~a~KL~~i~~~~-----~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~m~~~a~~~----~~~~~~~~~~v~~~ 127 (265)
T 2oxt_A 58 RGTAKLAWMEERG-----YVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYTLGVGGHEV----PRITESYGWNIVKF 127 (265)
T ss_dssp THHHHHHHHHHHT-----SCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEECCCCSSCCC----CCCCCBTTGGGEEE
T ss_pred hHHHHHHHHHHcC-----CCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECchhhhhhhhh----hhhhhccCCCeEEE
Confidence 3455565555431 2346889999999999999999988 789999994453222211 00000 00145554
Q ss_pred --EEecCCCCCCCcCCCCCcEEEEccccCCCCcH----H---HHHHHHHHhhCCCc--EEEEEEeeeChhHHHHHHHHHh
Q 023543 180 --ELTWGDDPDQDLIQPLPDYVLGSDVIYSEGAV----G---DLLDTLLQLCGTQT--TIFLAGELRNDSVLEYFLEAAM 248 (281)
Q Consensus 180 --~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~----~---~ll~~l~~ll~~~g--~~~l~~~~r~~~~~~~fl~~~~ 248 (281)
..|.. + +.+.+||+|++.-. +..... . .+++.+.++|+||| .+++............++..+.
T Consensus 128 ~~~~D~~---~--l~~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~ 201 (265)
T 2oxt_A 128 KSRVDIH---T--LPVERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQ 201 (265)
T ss_dssp ECSCCTT---T--SCCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHH
T ss_pred ecccCHh---H--CCCCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHH
Confidence 33322 2 33578999998544 322111 1 27788889999999 8777443322222224666666
Q ss_pred cCCe
Q 023543 249 KDFV 252 (281)
Q Consensus 249 ~~f~ 252 (281)
+.|.
T Consensus 202 ~~f~ 205 (265)
T 2oxt_A 202 RKWG 205 (265)
T ss_dssp HHHC
T ss_pred HHcC
Confidence 5554
No 240
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.98 E-value=1.8e-09 Score=98.26 Aligned_cols=97 Identities=15% Similarity=0.130 Sum_probs=76.8
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
++.+|||+|||+|..+..+++. +.+++++|++.+++.+++ . .++.+...|..+ .+ +.||+|
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~-----~~v~~~~~d~~~----~~--p~~D~v 250 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSG------S-----NNLTYVGGDMFT----SI--PNADAV 250 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC------B-----TTEEEEECCTTT----CC--CCCSEE
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhccc------C-----CCcEEEeccccC----CC--CCccEE
Confidence 5679999999999999988874 568999999777776653 1 247777755432 12 349999
Q ss_pred EEccccCCCCcHH--HHHHHHHHhhCC---CcEEEEEEeee
Q 023543 200 LGSDVIYSEGAVG--DLLDTLLQLCGT---QTTIFLAGELR 235 (281)
Q Consensus 200 ia~d~iy~~~~~~--~ll~~l~~ll~~---~g~~~l~~~~r 235 (281)
++..++++..+.+ .+++.+.+.|+| ||.+++.....
T Consensus 251 ~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 251 LLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred EeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 9999999877766 999999999999 99998886543
No 241
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.98 E-value=1.6e-09 Score=95.01 Aligned_cols=123 Identities=7% Similarity=-0.063 Sum_probs=83.7
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHH--hhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIEN--NLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~--n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.+++|||||||+|.++..+++.+.+|+++|+ +.+++.+++++.. ++.. ..++.+..-| .... . .+||+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~---~~rv~~~~~D---~~~~--~-~~fD~ 142 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKN---NKNFTHAKQL---LDLD--I-KKYDL 142 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHT---CTTEEEESSG---GGSC--C-CCEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccC---CCeEEEEech---HHHH--H-hhCCE
Confidence 5689999999999988877766678999999 8899999987643 2222 1356655433 2221 1 67999
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeee--ChhHHHHHHHHHhcCCeEEEEec
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELR--NDSVLEYFLEAAMKDFVIGRVEQ 258 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r--~~~~~~~fl~~~~~~f~v~~i~~ 258 (281)
|++. . .+...+++.+.++|+|||++++..... ....+......+.+.|.......
T Consensus 143 Ii~d-~----~dp~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~ 199 (262)
T 2cmg_A 143 IFCL-Q----EPDIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFV 199 (262)
T ss_dssp EEES-S----CCCHHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEC-C----CChHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEEE
Confidence 9974 2 122348999999999999988754332 22344555666666787555443
No 242
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.97 E-value=8.5e-10 Score=97.86 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=59.4
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|.++..++..+.+|+++|+ +.+++.+++|+..++.. .++.+...|..+ . ..++||+|
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~D~~~---~--~~~~fD~v 97 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVA----SKLQVLVGDVLK---T--DLPFFDTC 97 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTG----GGEEEEESCTTT---S--CCCCCSEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCC----CceEEEEcceec---c--cchhhcEE
Confidence 46789999999999999999999999999999 88999999998766542 367777755432 1 12479999
Q ss_pred EEcccc
Q 023543 200 LGSDVI 205 (281)
Q Consensus 200 ia~d~i 205 (281)
+++-+.
T Consensus 98 v~nlpy 103 (285)
T 1zq9_A 98 VANLPY 103 (285)
T ss_dssp EEECCG
T ss_pred EEecCc
Confidence 985443
No 243
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.95 E-value=3.7e-09 Score=94.38 Aligned_cols=76 Identities=20% Similarity=0.174 Sum_probs=57.9
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|.++..++..+.+|+++|+ +.+++.+++|+..++.. ++.+...|..+. ..++||+|
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~-----~v~~~~~D~~~~-----~~~~~D~V 110 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYN-----NLEVYEGDAIKT-----VFPKFDVC 110 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCC-----CEEC----CCSS-----CCCCCSEE
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEECchhhC-----CcccCCEE
Confidence 46789999999999999999998999999999 88999999999877643 576666554321 22579999
Q ss_pred EEccccCC
Q 023543 200 LGSDVIYS 207 (281)
Q Consensus 200 ia~d~iy~ 207 (281)
+++ ..|+
T Consensus 111 v~n-~py~ 117 (299)
T 2h1r_A 111 TAN-IPYK 117 (299)
T ss_dssp EEE-CCGG
T ss_pred EEc-CCcc
Confidence 875 4454
No 244
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.93 E-value=4.6e-09 Score=95.77 Aligned_cols=96 Identities=15% Similarity=0.101 Sum_probs=75.6
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.+.+|||+|||+|..+..+++. +.+++++|++.+++.+++ . .++.+...|..+ .+ ++||+|
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~-----~~v~~~~~d~~~----~~--~~~D~v 255 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTG------N-----ENLNFVGGDMFK----SI--PSADAV 255 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCC------C-----SSEEEEECCTTT----CC--CCCSEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhccc------C-----CCcEEEeCccCC----CC--CCceEE
Confidence 5679999999999999988875 457999999877765542 1 247777765433 12 359999
Q ss_pred EEccccCCCCcHH--HHHHHHHHhhCC---CcEEEEEEee
Q 023543 200 LGSDVIYSEGAVG--DLLDTLLQLCGT---QTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~~~--~ll~~l~~ll~~---~g~~~l~~~~ 234 (281)
+++.++++..+.. .+++.+.+.|+| ||.+++....
T Consensus 256 ~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 256 LLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred EEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 9999999877755 999999999999 9998887654
No 245
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.90 E-value=6.8e-09 Score=95.90 Aligned_cols=104 Identities=15% Similarity=0.143 Sum_probs=78.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC----------------------------------------CEEEEEec-hhHHHHH
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG----------------------------------------AQVILTDL-PDRLRLL 159 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g----------------------------------------~~V~~tD~-~~~l~~~ 159 (281)
.++.+|||+|||+|.+.+.+|..+ .+|+++|+ +.+++.+
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 467899999999999999988754 36999999 8999999
Q ss_pred HHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCCC-----CcHHHHHHHHHHhhCC--CcEEEEEE
Q 023543 160 KKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSE-----GAVGDLLDTLLQLCGT--QTTIFLAG 232 (281)
Q Consensus 160 ~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~-----~~~~~ll~~l~~ll~~--~g~~~l~~ 232 (281)
++|+..+++. ..+.+...|..+.. ...+||+|+++-. |.. ..+..+.+.+.+.+++ ++.+++..
T Consensus 274 r~Na~~~gl~----~~i~~~~~D~~~l~----~~~~~D~Iv~NPP-yg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 274 RENAEIAGVD----EYIEFNVGDATQFK----SEDEFGFIITNPP-YGERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHHHTCG----GGEEEEECCGGGCC----CSCBSCEEEECCC-CCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred HHHHHHcCCC----CceEEEECChhhcC----cCCCCcEEEECCC-CcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 9999999875 46888886654422 2357999887655 442 3456677777777766 77766654
Q ss_pred e
Q 023543 233 E 233 (281)
Q Consensus 233 ~ 233 (281)
.
T Consensus 345 ~ 345 (385)
T 3ldu_A 345 S 345 (385)
T ss_dssp S
T ss_pred C
Confidence 4
No 246
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.88 E-value=7.7e-09 Score=95.79 Aligned_cols=104 Identities=17% Similarity=0.181 Sum_probs=77.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC----------------------------------------EEEEEec-hhHHHHH
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA----------------------------------------QVILTDL-PDRLRLL 159 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~----------------------------------------~V~~tD~-~~~l~~~ 159 (281)
.++.+|||.|||+|.+.+.+|..+. +|+++|+ +.+++.+
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 4678999999999999998887543 4999999 8899999
Q ss_pred HHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCCC-----CcHHHHHHHHHHhhCC--CcEEEEEE
Q 023543 160 KKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSE-----GAVGDLLDTLLQLCGT--QTTIFLAG 232 (281)
Q Consensus 160 ~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~-----~~~~~ll~~l~~ll~~--~g~~~l~~ 232 (281)
+.|+..+++. +++.+...|+.+.. ...+||+|+++-. |.. ..+..+.+.+.+.+++ |+.+++..
T Consensus 280 r~Na~~~gl~----~~I~~~~~D~~~~~----~~~~fD~Iv~NPP-Yg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 280 KQNAVEAGLG----DLITFRQLQVADFQ----TEDEYGVVVANPP-YGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHTTCT----TCSEEEECCGGGCC----CCCCSCEEEECCC-CCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHHHcCCC----CceEEEECChHhCC----CCCCCCEEEECCC-CccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999999876 46788876654322 2357999887655 442 3455667777777665 77776665
Q ss_pred e
Q 023543 233 E 233 (281)
Q Consensus 233 ~ 233 (281)
.
T Consensus 351 ~ 351 (393)
T 3k0b_A 351 S 351 (393)
T ss_dssp C
T ss_pred C
Confidence 4
No 247
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.88 E-value=3e-09 Score=97.53 Aligned_cols=96 Identities=13% Similarity=0.038 Sum_probs=75.7
Q ss_pred CCCeEEEECCCcCHHHHHHHHcC--CEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLG--AQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g--~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
++.+|||+|||+|..+..+++.. .+++++|++.+++.++++ .++.+...|..+ .+ +.||+|
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-----------~~v~~~~~d~~~----~~--~~~D~v 271 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPL-----------SGIEHVGGDMFA----SV--PQGDAM 271 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCC-----------TTEEEEECCTTT----CC--CCEEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhhc-----------CCCEEEeCCccc----CC--CCCCEE
Confidence 56799999999999999888754 478999997777665531 257777765543 12 239999
Q ss_pred EEccccCCCCcHH--HHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSEGAVG--DLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~~~~~--~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
++..++++..+.. .+++.+.+.|+|||.+++....
T Consensus 272 ~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 272 ILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 9999999877766 9999999999999999888543
No 248
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.87 E-value=3.1e-08 Score=91.84 Aligned_cols=110 Identities=14% Similarity=0.059 Sum_probs=76.7
Q ss_pred HHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEE
Q 023543 103 GVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (281)
Q Consensus 103 s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~ 178 (281)
...+++++.+.+. ..++.+|||+|||+|.+++.+++. +.+|+++|+ +.+++.+ .++.+
T Consensus 24 P~~l~~~~~~~~~----~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------~~~~~ 85 (421)
T 2ih2_A 24 PPEVVDFMVSLAE----APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------PWAEG 85 (421)
T ss_dssp CHHHHHHHHHHCC----CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------------TTEEE
T ss_pred CHHHHHHHHHhhc----cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------------CCCcE
Confidence 3456777766532 135679999999999999998873 568999999 7787655 14556
Q ss_pred EEEecCCCCCCCcCCCCCcEEEEccccCCCC-----------------------------cHHHHHHHHHHhhCCCcEEE
Q 023543 179 TELTWGDDPDQDLIQPLPDYVLGSDVIYSEG-----------------------------AVGDLLDTLLQLCGTQTTIF 229 (281)
Q Consensus 179 ~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~-----------------------------~~~~ll~~l~~ll~~~g~~~ 229 (281)
...|..+.. ...+||+|+++.+..... ....+++.+.++|+++|.+.
T Consensus 86 ~~~D~~~~~----~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~ 161 (421)
T 2ih2_A 86 ILADFLLWE----PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLV 161 (421)
T ss_dssp EESCGGGCC----CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEE
T ss_pred EeCChhhcC----ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEE
Confidence 665543221 236899999975543321 12367888999999999988
Q ss_pred EEEee
Q 023543 230 LAGEL 234 (281)
Q Consensus 230 l~~~~ 234 (281)
+..+.
T Consensus 162 ~i~p~ 166 (421)
T 2ih2_A 162 FVVPA 166 (421)
T ss_dssp EEEEG
T ss_pred EEECh
Confidence 77664
No 249
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.87 E-value=2.8e-08 Score=93.44 Aligned_cols=118 Identities=13% Similarity=0.044 Sum_probs=80.9
Q ss_pred HHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc---------------CCEEEEEec-hhHHHHHHHHHHHhhc
Q 023543 105 VLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL---------------GAQVILTDL-PDRLRLLKKNIENNLR 168 (281)
Q Consensus 105 ~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~---------------g~~V~~tD~-~~~l~~~~~N~~~n~~ 168 (281)
.+++++.+.+. ...+.+|||.|||+|.+.+.+++. +.+++|+|+ +.++++++.|+..++.
T Consensus 158 ~v~~~mv~~l~----~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~ 233 (445)
T 2okc_A 158 PLIQAMVDCIN----PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGI 233 (445)
T ss_dssp HHHHHHHHHHC----CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhC----CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCC
Confidence 34555554322 245779999999999888877753 356999999 8899999999998876
Q ss_pred CCCCCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCCCCc-----------------HHHHHHHHHHhhCCCcEEEEE
Q 023543 169 HGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSEGA-----------------VGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 169 ~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~-----------------~~~ll~~l~~ll~~~g~~~l~ 231 (281)
.. .++.+...| ..... ...+||+|+++.++..... .-.+++.+.++|+|||++.++
T Consensus 234 ~~---~~~~i~~gD---~l~~~-~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V 306 (445)
T 2okc_A 234 GT---DRSPIVCED---SLEKE-PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVV 306 (445)
T ss_dssp CS---SCCSEEECC---TTTSC-CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Cc---CCCCEeeCC---CCCCc-ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEE
Confidence 31 123344433 22221 1248999999766543211 237889999999999998777
Q ss_pred Ee
Q 023543 232 GE 233 (281)
Q Consensus 232 ~~ 233 (281)
.+
T Consensus 307 ~p 308 (445)
T 2okc_A 307 LP 308 (445)
T ss_dssp EE
T ss_pred EC
Confidence 65
No 250
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.86 E-value=3.7e-09 Score=94.72 Aligned_cols=133 Identities=16% Similarity=0.023 Sum_probs=77.6
Q ss_pred hHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-----hhHHHHHHHHHHHhhcCCCCCCce
Q 023543 102 SGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-----PDRLRLLKKNIENNLRHGDLRGSA 176 (281)
Q Consensus 102 ~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-----~~~l~~~~~N~~~n~~~~~~~~~i 176 (281)
++..|.+.+... ...++++|||||||+|..+..+++. .+|+++|+ +.+++.+. +...+ ..++
T Consensus 67 ~a~KL~~i~~~~-----~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~--~~~~~-----~~~v 133 (305)
T 2p41_A 67 GSAKLRWFVERN-----LVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIP--MSTYG-----WNLV 133 (305)
T ss_dssp HHHHHHHHHHTT-----SSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCC--CCSTT-----GGGE
T ss_pred HHHHHHHHHHcC-----CCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHH--hhhcC-----CCCe
Confidence 455565555431 2345789999999999999999988 57999998 33332111 00000 1245
Q ss_pred EEEEE-ecCCCCCCCcCCCCCcEEEEccccC---CCCcHH---HHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhc
Q 023543 177 VVTEL-TWGDDPDQDLIQPLPDYVLGSDVIY---SEGAVG---DLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMK 249 (281)
Q Consensus 177 ~~~~l-~w~~~~~~~~~~~~fD~Iia~d~iy---~~~~~~---~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~ 249 (281)
.+... |. .. ++..+||+|++.-... ...+.. .++..+.++|+|||.+++............++..+..
T Consensus 134 ~~~~~~D~---~~--l~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~~~~~~~~l~~l~~ 208 (305)
T 2p41_A 134 RLQSGVDV---FF--IPPERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPYMSSVIEKMEALQR 208 (305)
T ss_dssp EEECSCCT---TT--SCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCCSHHHHHHHHHHHH
T ss_pred EEEecccc---cc--CCcCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCCCchHHHHHHHHHH
Confidence 55542 22 11 2346899999843321 111111 4677888999999987764332222333556666665
Q ss_pred CCe
Q 023543 250 DFV 252 (281)
Q Consensus 250 ~f~ 252 (281)
.|.
T Consensus 209 ~f~ 211 (305)
T 2p41_A 209 KHG 211 (305)
T ss_dssp HHC
T ss_pred HcC
Confidence 454
No 251
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.86 E-value=1.6e-08 Score=93.29 Aligned_cols=105 Identities=14% Similarity=0.155 Sum_probs=79.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCC----------------------------------------EEEEEec-hhHHHHH
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGA----------------------------------------QVILTDL-PDRLRLL 159 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~----------------------------------------~V~~tD~-~~~l~~~ 159 (281)
.++..|||.+||+|.+.+.+|..+. +|+++|+ +.|++.+
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 4678999999999999998887543 4999999 8899999
Q ss_pred HHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCC----CCcHHHHHHHHHHhhCC--CcEEEEEEe
Q 023543 160 KKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYS----EGAVGDLLDTLLQLCGT--QTTIFLAGE 233 (281)
Q Consensus 160 ~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~----~~~~~~ll~~l~~ll~~--~g~~~l~~~ 233 (281)
++|+..+++. +.+.+...|..+.. ...+||+|+++-.... ...+..+.+.+.+.+++ |+.+++...
T Consensus 273 r~Na~~~gl~----~~I~~~~~D~~~l~----~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 273 RKNAREVGLE----DVVKLKQMRLQDFK----TNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHHTTCT----TTEEEEECCGGGCC----CCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHHcCCC----CceEEEECChHHCC----ccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 9999999876 46888876654322 1247998886554322 23567788888888876 787776655
No 252
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.85 E-value=2.8e-09 Score=87.01 Aligned_cols=110 Identities=11% Similarity=0.038 Sum_probs=78.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.+|.+|||||||. +.+|+ +.|++.++++... ++.+...+..+.....+.+.+||+|
T Consensus 11 ~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~---------~~~~~~~d~~~~~~~~~~~~~fD~V 67 (176)
T 2ld4_A 11 SAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTGN---------EGRVSVENIKQLLQSAHKESSFDII 67 (176)
T ss_dssp CTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTT---------TSEEEEEEGGGGGGGCCCSSCEEEE
T ss_pred CCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhccc---------CcEEEEechhcCccccCCCCCEeEE
Confidence 4688999999996 23999 7899999877532 2556666654321111245789999
Q ss_pred EEccccCCC-CcHHHHHHHHHHhhCCCcEEEEEEeeeCh-------hHHHHHHHHHh-cCCeEE
Q 023543 200 LGSDVIYSE-GAVGDLLDTLLQLCGTQTTIFLAGELRND-------SVLEYFLEAAM-KDFVIG 254 (281)
Q Consensus 200 ia~d~iy~~-~~~~~ll~~l~~ll~~~g~~~l~~~~r~~-------~~~~~fl~~~~-~~f~v~ 254 (281)
+++.++++. .+...+++.++++|||||.+++....... ...+.+.+.+. .|| +.
T Consensus 68 ~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 68 LSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp EECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred EECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence 999999887 88899999999999999999986553221 11344555555 489 65
No 253
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.85 E-value=6.4e-09 Score=95.24 Aligned_cols=96 Identities=14% Similarity=0.072 Sum_probs=75.3
Q ss_pred CCCeEEEECCCcCHHHHHHHH--cCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 122 HGKKIVELGSGCGLVGCIAAL--LGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~--~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.+.+|||+|||+|..+..+++ .+.+++++|++.+++.++++ .++.+...|..+ .++. -|+|
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-----------~~v~~~~~D~~~----~~p~--~D~v 263 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQF-----------PGVTHVGGDMFK----EVPS--GDTI 263 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCC-----------TTEEEEECCTTT----CCCC--CSEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhc-----------CCeEEEeCCcCC----CCCC--CCEE
Confidence 467999999999999998887 45689999998887665531 368888866543 2222 2999
Q ss_pred EEccccCCC--CcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 200 LGSDVIYSE--GAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 200 ia~d~iy~~--~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
++..++|+. .....+++.+++.|+|||.+++....
T Consensus 264 ~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 264 LMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 999999875 44668999999999999999887654
No 254
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.84 E-value=1.6e-09 Score=100.58 Aligned_cols=89 Identities=18% Similarity=0.174 Sum_probs=66.5
Q ss_pred cchHHHHHHHHhhhhccCccccC-CCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHh--hcCCCCCCc
Q 023543 100 WDSGVVLGKFLEHAVDSGMLLLH-GKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENN--LRHGDLRGS 175 (281)
Q Consensus 100 W~~s~~la~~l~~~~~~~~~~~~-~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n--~~~~~~~~~ 175 (281)
+-++...+.|-... ++ |++|||||||+|..++.+++.+.+|+++|+ +.+++.+++|++.+ +.. +
T Consensus 77 Qat~e~vA~~~a~~-------l~~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~-----~ 144 (410)
T 3ll7_A 77 QSSGAVTSSYKSRF-------IREGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGK-----D 144 (410)
T ss_dssp HSCCHHHHHHGGGG-------SCTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTC-----E
T ss_pred hcCHHHHHHHHHHh-------cCCCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCC-----c
Confidence 33455566664432 33 899999999999999999999999999999 88999999999988 653 6
Q ss_pred eEEEEEecCCCCCCCcCCCCCcEEEE
Q 023543 176 AVVTELTWGDDPDQDLIQPLPDYVLG 201 (281)
Q Consensus 176 i~~~~l~w~~~~~~~~~~~~fD~Iia 201 (281)
+.+...|..+.... ..+.+||+|++
T Consensus 145 i~~i~~Da~~~L~~-~~~~~fDvV~l 169 (410)
T 3ll7_A 145 VNILTGDFKEYLPL-IKTFHPDYIYV 169 (410)
T ss_dssp EEEEESCGGGSHHH-HHHHCCSEEEE
T ss_pred EEEEECcHHHhhhh-ccCCCceEEEE
Confidence 77877654332110 11247998886
No 255
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.80 E-value=3.6e-09 Score=92.54 Aligned_cols=81 Identities=20% Similarity=0.173 Sum_probs=61.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-h-------hHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-P-------DRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLI 192 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~-------~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~ 192 (281)
.++.+|||+|||+|..++.+|..|.+|+++|+ + ++++.+++|++.|+.. +++.+...|..+... .+.
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~----~ri~~~~~d~~~~l~-~~~ 156 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTA----ARINLHFGNAAEQMP-ALV 156 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH----TTEEEEESCHHHHHH-HHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCc----cCeEEEECCHHHHHH-hhh
Confidence 35789999999999999999999999999999 8 8899999999999875 358887755432111 122
Q ss_pred C--CCCcEEEEccccCC
Q 023543 193 Q--PLPDYVLGSDVIYS 207 (281)
Q Consensus 193 ~--~~fD~Iia~d~iy~ 207 (281)
+ .+||+|+.. ..|.
T Consensus 157 ~~~~~fD~V~~d-P~~~ 172 (258)
T 2r6z_A 157 KTQGKPDIVYLD-PMYP 172 (258)
T ss_dssp HHHCCCSEEEEC-CCC-
T ss_pred ccCCCccEEEEC-CCCC
Confidence 2 579998864 4444
No 256
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.79 E-value=6.5e-09 Score=95.91 Aligned_cols=96 Identities=11% Similarity=0.022 Sum_probs=69.4
Q ss_pred cCCCeEEEECCC------cCHHHHHHHH---cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC
Q 023543 121 LHGKKIVELGSG------CGLVGCIAAL---LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD 190 (281)
Q Consensus 121 ~~~~~VLELGcG------tG~~~i~~a~---~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~ 190 (281)
.++.+||||||| +|..++.+++ .+++|+++|+ +.|. .+ ..++.+...|.. +..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~------~~rI~fv~GDa~---dlp 277 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VD------ELRIRTIQGDQN---DAE 277 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GC------BTTEEEEECCTT---CHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hc------CCCcEEEEeccc---ccc
Confidence 467899999999 6666666654 3679999999 6662 11 146888775543 222
Q ss_pred cC------CCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 191 LI------QPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 191 ~~------~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
+. ..+||+|++. ..++..+....++.+.++|||||++++....
T Consensus 278 f~~~l~~~d~sFDlVisd-gsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 278 FLDRIARRYGPFDIVIDD-GSHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHHHHHHHCCEEEEEEC-SCCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred hhhhhhcccCCccEEEEC-CcccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 22 4789999975 4455667888999999999999999887543
No 257
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.79 E-value=6.5e-08 Score=86.74 Aligned_cols=89 Identities=15% Similarity=0.100 Sum_probs=64.9
Q ss_pred cchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc---CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCc
Q 023543 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGS 175 (281)
Q Consensus 100 W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~ 175 (281)
-.++.+++.++. ..+|.+|||+|||+|..++.+|.. ..+|+++|+ +.+++.+++|++++++. +
T Consensus 88 d~~s~l~~~~l~--------~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-----~ 154 (309)
T 2b9e_A 88 DRASCLPAMLLD--------PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-----C 154 (309)
T ss_dssp CTGGGHHHHHHC--------CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-----S
T ss_pred CHHHHHHHHHhC--------CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----e
Confidence 345666666653 356889999999999999888863 368999999 88999999999999875 6
Q ss_pred eEEEEEecCCCCCCCcCCCCCcEEEE
Q 023543 176 AVVTELTWGDDPDQDLIQPLPDYVLG 201 (281)
Q Consensus 176 i~~~~l~w~~~~~~~~~~~~fD~Iia 201 (281)
+.+...|+.+.....-...+||.|+.
T Consensus 155 v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 155 CELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp EEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred EEEEeCChHhcCccccccCCCCEEEE
Confidence 77777665432211000146999886
No 258
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.78 E-value=4.7e-08 Score=87.07 Aligned_cols=75 Identities=15% Similarity=0.006 Sum_probs=59.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.++.+|||+|||+|.++..++..+.+|+++|+ +++++.+++|+.. . .++.+...|.. ...+...+||+|
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~--~-----~~v~vi~gD~l---~~~~~~~~fD~I 118 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKEL--Y-----NNIEIIWGDAL---KVDLNKLDFNKV 118 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHH--C-----SSEEEEESCTT---TSCGGGSCCSEE
T ss_pred CCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhcc--C-----CCeEEEECchh---hCCcccCCccEE
Confidence 46789999999999999999999999999999 8899999999872 2 36777775543 223344579999
Q ss_pred EEcccc
Q 023543 200 LGSDVI 205 (281)
Q Consensus 200 ia~d~i 205 (281)
+++-..
T Consensus 119 v~NlPy 124 (295)
T 3gru_A 119 VANLPY 124 (295)
T ss_dssp EEECCG
T ss_pred EEeCcc
Confidence 977443
No 259
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.77 E-value=2.7e-08 Score=87.56 Aligned_cols=107 Identities=15% Similarity=0.138 Sum_probs=76.1
Q ss_pred CeEEEECCCc---CHHHHHHHH--cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC---C-----C
Q 023543 124 KKIVELGSGC---GLVGCIAAL--LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP---D-----Q 189 (281)
Q Consensus 124 ~~VLELGcGt---G~~~i~~a~--~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~---~-----~ 189 (281)
.+|||||||+ |.+...+.. .+++|+++|. +.||..++.++..+.. .++.+...|..+.. . .
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~-----~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE-----GRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS-----SEEEEEECCTTCHHHHHTCHHHHT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC-----CcEEEEEecccChhhhhccccccc
Confidence 6899999997 444444433 4679999999 8999999988765421 36778887764421 0 0
Q ss_pred Cc-CCCCCcEEEEccccCCCCc---HHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 190 DL-IQPLPDYVLGSDVIYSEGA---VGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 190 ~~-~~~~fD~Iia~d~iy~~~~---~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
.+ .+.++ .|+++.++++..+ ...+++.+.+.|+|||.++++.....
T Consensus 155 ~~D~~~p~-av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 155 TLDLTRPV-ALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp TCCTTSCC-EEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred ccCcCCcc-hHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 01 12333 5778888888655 57899999999999999999876654
No 260
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.72 E-value=2.2e-08 Score=91.30 Aligned_cols=154 Identities=18% Similarity=0.167 Sum_probs=88.2
Q ss_pred CCCeEEEECCCcCHHHHHHHHcC-CEEEEEec-hhHHHHHHHHHHHhh---cCCCCCCceEEEEEecCCCCCCCc--CCC
Q 023543 122 HGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNL---RHGDLRGSAVVTELTWGDDPDQDL--IQP 194 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g-~~V~~tD~-~~~l~~~~~N~~~n~---~~~~~~~~i~~~~l~w~~~~~~~~--~~~ 194 (281)
++++||+||||+|.++..+++.+ .+|+++|+ +.+++.+++|+...+ .......++.+..-|...... .. ...
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~-~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLK-RYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHH-HHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHH-hhhccCC
Confidence 67899999999999999888765 47999999 889999999975321 110001256666643221110 01 246
Q ss_pred CCcEEEEccccC---C--CC--cHHHHHHHH----HHhhCCCcEEEEEEeeeC-hhHHHHHHHHHhcCCe-EEEEecCCC
Q 023543 195 LPDYVLGSDVIY---S--EG--AVGDLLDTL----LQLCGTQTTIFLAGELRN-DSVLEYFLEAAMKDFV-IGRVEQTQW 261 (281)
Q Consensus 195 ~fD~Iia~d~iy---~--~~--~~~~ll~~l----~~ll~~~g~~~l~~~~r~-~~~~~~fl~~~~~~f~-v~~i~~~~~ 261 (281)
+||+|+.- ... . +. .-..+.+.+ .++|+|+|++++...... ++....+-+.+.+.|. +..-...-.
T Consensus 267 ~fDvII~D-~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~~~~~~~ 345 (364)
T 2qfm_A 267 EFDYVIND-LTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEIVC 345 (364)
T ss_dssp CEEEEEEE-CCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEEEEEEC
T ss_pred CceEEEEC-CCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCceEEeeEeee
Confidence 89999873 221 1 11 124455555 899999999877655443 3333333333566664 322112223
Q ss_pred CCCCCCCcEEEEEEEecC
Q 023543 262 HPDYCSPRVVVYILVKKL 279 (281)
Q Consensus 262 ~~~~~~~~~~i~~~~~k~ 279 (281)
.|-|.. ...|....|.
T Consensus 346 vPsy~~--~w~f~~~~k~ 361 (364)
T 2qfm_A 346 VPSYLE--LWVFYTVWKK 361 (364)
T ss_dssp CGGGSS--CEEEEEEEEC
T ss_pred cCCchh--heEeEEeecc
Confidence 444543 4445444443
No 261
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.71 E-value=4.3e-08 Score=95.50 Aligned_cols=100 Identities=11% Similarity=0.032 Sum_probs=73.0
Q ss_pred cCCCeEEEECCCcCHHHHHH---HHcC-C--EEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIA---ALLG-A--QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQP 194 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~---a~~g-~--~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~ 194 (281)
.+++.|||+|||+|.++..+ ++.+ . +|++++-+.+...+++++..|+.. ++|.+..-+-.+ .. ..+
T Consensus 356 ~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~----dkVtVI~gd~ee---v~-LPE 427 (637)
T 4gqb_A 356 TNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWG----SQVTVVSSDMRE---WV-APE 427 (637)
T ss_dssp TCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTG----GGEEEEESCTTT---CC-CSS
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCC----CeEEEEeCccee---cc-CCc
Confidence 45678999999999985444 4333 2 589999966777889999999886 688888855332 22 336
Q ss_pred CCcEEEEcc---ccCCCCcHHHHHHHHHHhhCCCcEEE
Q 023543 195 LPDYVLGSD---VIYSEGAVGDLLDTLLQLCGTQTTIF 229 (281)
Q Consensus 195 ~fD~Iia~d---~iy~~~~~~~ll~~l~~ll~~~g~~~ 229 (281)
++|+||+-- .+.++.++ .++....++|||+|+++
T Consensus 428 KVDIIVSEwMG~fLl~E~ml-evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 428 KADIIVSELLGSFADNELSP-ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CEEEEECCCCBTTBGGGCHH-HHHHHHGGGEEEEEEEE
T ss_pred ccCEEEEEcCcccccccCCH-HHHHHHHHhcCCCcEEc
Confidence 899999832 33345544 68888899999998754
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.64 E-value=5.8e-08 Score=84.71 Aligned_cols=78 Identities=15% Similarity=0.186 Sum_probs=56.9
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCc-CCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL-IQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~-~~~~fD~ 198 (281)
.++.+|||+|||+|.++..++..+.+|+++|+ +++++.+++|+... .++.+...|..+..-..+ .+.+||
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~-------~~v~~i~~D~~~~~~~~~~~~~~~~- 99 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQ-------KNITIYQNDALQFDFSSVKTDKPLR- 99 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTC-------TTEEEEESCTTTCCGGGSCCSSCEE-
T ss_pred CCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhC-------CCcEEEEcchHhCCHHHhccCCCeE-
Confidence 46789999999999999999999999999999 88999999988651 367777765543211111 135677
Q ss_pred EEEccccCC
Q 023543 199 VLGSDVIYS 207 (281)
Q Consensus 199 Iia~d~iy~ 207 (281)
|+++ .-|+
T Consensus 100 vv~N-lPY~ 107 (255)
T 3tqs_A 100 VVGN-LPYN 107 (255)
T ss_dssp EEEE-CCHH
T ss_pred EEec-CCcc
Confidence 5554 4444
No 263
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.64 E-value=2.6e-07 Score=88.96 Aligned_cols=155 Identities=12% Similarity=0.011 Sum_probs=93.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--------------------CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--------------------GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVT 179 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--------------------g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~ 179 (281)
.++.+|||.|||||.+.+.+++. ..+++|+|+ +.++.+++.|+..++.......+..+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 45779999999999887777652 136999999 889999999999887641000013333
Q ss_pred EEecCCCCCCC-cCCCCCcEEEEccccCCCC--------------cHHHHHHHHHHhhCCCcEEEEEEeee---ChhHHH
Q 023543 180 ELTWGDDPDQD-LIQPLPDYVLGSDVIYSEG--------------AVGDLLDTLLQLCGTQTTIFLAGELR---NDSVLE 241 (281)
Q Consensus 180 ~l~w~~~~~~~-~~~~~fD~Iia~d~iy~~~--------------~~~~ll~~l~~ll~~~g~~~l~~~~r---~~~~~~ 241 (281)
. ++..... ....+||+|+++.++.... ..-.++..+.++|+|+|++.+..+.. .....+
T Consensus 248 ~---gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~ 324 (541)
T 2ar0_A 248 L---GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGT 324 (541)
T ss_dssp E---SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHH
T ss_pred e---CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHHH
Confidence 3 3322211 1236799999876643321 12368888999999999977776532 111223
Q ss_pred HHHHHHhcCCeEEEEecCCCCCCCCC--CcEEEEEEEecC
Q 023543 242 YFLEAAMKDFVIGRVEQTQWHPDYCS--PRVVVYILVKKL 279 (281)
Q Consensus 242 ~fl~~~~~~f~v~~i~~~~~~~~~~~--~~~~i~~~~~k~ 279 (281)
.+.+.+.+.+.+..+-.-.- ..|.. -...|+.+.|++
T Consensus 325 ~iR~~L~~~~~l~~ii~Lp~-~~F~~t~v~t~Ilvl~k~~ 363 (541)
T 2ar0_A 325 DIRRDLMDKCHLHTILRLPT-GIFYAQGVKTNVLFFTKGT 363 (541)
T ss_dssp HHHHHHHHHEEEEEEEECCS-SCSSSCSCCEEEEEEEEBC
T ss_pred HHHHHHhhcCCEEEEEEcCc-CcccCCCCcEEEEEEECCC
Confidence 34444444455555432211 12332 244566666643
No 264
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.60 E-value=3.2e-07 Score=79.27 Aligned_cols=76 Identities=12% Similarity=0.038 Sum_probs=55.4
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcC-CCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLI-QPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~-~~~fD~ 198 (281)
.++.+|||+|||+|.++..++..+.+|+++|+ +.+++.+++|+... .++.+...|..+. .+. ..+|
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~-------~~v~~~~~D~~~~---~~~~~~~~-- 96 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDH-------DNFQVLNKDILQF---KFPKNQSY-- 96 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTC-------CSEEEECCCGGGC---CCCSSCCC--
T ss_pred CCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccC-------CCeEEEEChHHhC---CcccCCCe--
Confidence 46789999999999999999999999999999 88999999887532 3577776554332 122 1234
Q ss_pred EEEccccCCC
Q 023543 199 VLGSDVIYSE 208 (281)
Q Consensus 199 Iia~d~iy~~ 208 (281)
++.+++.|+.
T Consensus 97 ~vv~nlPy~~ 106 (244)
T 1qam_A 97 KIFGNIPYNI 106 (244)
T ss_dssp EEEEECCGGG
T ss_pred EEEEeCCccc
Confidence 4555566653
No 265
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.59 E-value=2.7e-07 Score=91.47 Aligned_cols=106 Identities=16% Similarity=0.041 Sum_probs=76.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC--------------------------------------------CEEEEEec-hhH
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG--------------------------------------------AQVILTDL-PDR 155 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g--------------------------------------------~~V~~tD~-~~~ 155 (281)
.++.+|||.+||+|.+.+.+|..+ .+|+|+|+ +.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 467799999999999999888643 46999999 899
Q ss_pred HHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCCC-----CcHHHHHHHHHHhh---CCCcE
Q 023543 156 LRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSE-----GAVGDLLDTLLQLC---GTQTT 227 (281)
Q Consensus 156 l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~-----~~~~~ll~~l~~ll---~~~g~ 227 (281)
++.++.|+..+++. +.+.+...|..+... .....+||+||++.+ |.. ..+..+.+.+.+.+ .|||.
T Consensus 269 v~~A~~N~~~agv~----~~i~~~~~D~~~~~~-~~~~~~~d~Iv~NPP-YG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~ 342 (703)
T 3v97_A 269 IQRARTNARLAGIG----ELITFEVKDVAQLTN-PLPKGPYGTVLSNPP-YGERLDSEPALIALHSLLGRIMKNQFGGWN 342 (703)
T ss_dssp HHHHHHHHHHTTCG----GGEEEEECCGGGCCC-SCTTCCCCEEEECCC-CCC---CCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHcCCC----CceEEEECChhhCcc-ccccCCCCEEEeCCC-ccccccchhHHHHHHHHHHHHHHhhCCCCe
Confidence 99999999999886 468888866543211 111237999887755 432 34566666666555 47888
Q ss_pred EEEEE
Q 023543 228 IFLAG 232 (281)
Q Consensus 228 ~~l~~ 232 (281)
+++..
T Consensus 343 ~~ilt 347 (703)
T 3v97_A 343 LSLFS 347 (703)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77653
No 266
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.54 E-value=3.4e-09 Score=91.66 Aligned_cols=77 Identities=13% Similarity=0.161 Sum_probs=54.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcC-CCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLI-QPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~-~~~fD~ 198 (281)
.++.+|||+|||+|.++..++..+.+|+++|+ +.+++.+++|+.. ..++.+...|+.+ ..+. +.+| .
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~-------~~~v~~~~~D~~~---~~~~~~~~f-~ 96 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKL-------NTRVTLIHQDILQ---FQFPNKQRY-K 96 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTT-------CSEEEECCSCCTT---TTCCCSSEE-E
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhcc-------CCceEEEECChhh---cCcccCCCc-E
Confidence 46779999999999999999998999999999 7888888877651 1356666655432 2222 2456 4
Q ss_pred EEEccccCCCC
Q 023543 199 VLGSDVIYSEG 209 (281)
Q Consensus 199 Iia~d~iy~~~ 209 (281)
|+ +++.|+..
T Consensus 97 vv-~n~Py~~~ 106 (245)
T 1yub_A 97 IV-GNIPYHLS 106 (245)
T ss_dssp EE-EECCSSSC
T ss_pred EE-EeCCcccc
Confidence 44 45556543
No 267
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.54 E-value=2.3e-07 Score=81.56 Aligned_cols=75 Identities=13% Similarity=0.070 Sum_probs=55.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCC-CCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQ-PLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~-~~fD~ 198 (281)
.++ +|||+|||+|.++..++..+++|+++|+ +++++.+++|+.. .++.+...|..+ ..+.. ..+|.
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~--------~~v~vi~~D~l~---~~~~~~~~~~~ 113 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSG--------LPVRLVFQDALL---YPWEEVPQGSL 113 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTT--------SSEEEEESCGGG---SCGGGSCTTEE
T ss_pred CCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC--------CCEEEEECChhh---CChhhccCccE
Confidence 456 9999999999999999999999999999 8899999988752 257777755432 12221 25788
Q ss_pred EEEccccCC
Q 023543 199 VLGSDVIYS 207 (281)
Q Consensus 199 Iia~d~iy~ 207 (281)
|+++-..+-
T Consensus 114 iv~NlPy~i 122 (271)
T 3fut_A 114 LVANLPYHI 122 (271)
T ss_dssp EEEEECSSC
T ss_pred EEecCcccc
Confidence 777655433
No 268
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.53 E-value=1.4e-06 Score=86.51 Aligned_cols=155 Identities=14% Similarity=0.019 Sum_probs=94.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC-----CEEEEEec-hhHHHHH--HHHHHHhhcCCCCCCceEEEEEecCCCCCCCcC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG-----AQVILTDL-PDRLRLL--KKNIENNLRHGDLRGSAVVTELTWGDDPDQDLI 192 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g-----~~V~~tD~-~~~l~~~--~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~ 192 (281)
.++.+|||.|||+|.+.+.++... .+++|+|+ +.+++.| +.|+..|...... ....+..-++... ....
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi-~~~~I~~dD~L~~--~~~~ 396 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSN-NAPTITGEDVCSL--NPED 396 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTT-BCCEEECCCGGGC--CGGG
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCC-CcceEEecchhcc--cccc
Confidence 357899999999999988888743 35999999 8889998 7787775443111 1122222121110 1123
Q ss_pred CCCCcEEEEccccCCC-----------------------------CcHHHHHHHHHHhhCCCcEEEEEEeee----ChhH
Q 023543 193 QPLPDYVLGSDVIYSE-----------------------------GAVGDLLDTLLQLCGTQTTIFLAGELR----NDSV 239 (281)
Q Consensus 193 ~~~fD~Iia~d~iy~~-----------------------------~~~~~ll~~l~~ll~~~g~~~l~~~~r----~~~~ 239 (281)
..+||+||++.+.... .....+++.+.++|+++|++.+..+.. ....
T Consensus 397 ~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~ 476 (878)
T 3s1s_A 397 FANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNE 476 (878)
T ss_dssp GTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHH
T ss_pred cCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChH
Confidence 4679999987665220 124457888889999999987776542 1222
Q ss_pred HHHHHHHHhcCCeEEEEecCCCCCCCCCC--cEEEEEEEec
Q 023543 240 LEYFLEAAMKDFVIGRVEQTQWHPDYCSP--RVVVYILVKK 278 (281)
Q Consensus 240 ~~~fl~~~~~~f~v~~i~~~~~~~~~~~~--~~~i~~~~~k 278 (281)
.+.+.+.+.+.+.+..+-.-.-...|... ...|+.+.|+
T Consensus 477 ~kkLRk~LLe~~~I~aIIdLP~~~~F~~asv~T~ILIlrK~ 517 (878)
T 3s1s_A 477 SKAFREFLVGNFGLEHIFLYPREGLFEEVIKDTVVFVGRKG 517 (878)
T ss_dssp HHHHHHHHTTTTCEEEEEECCBCCSSCSCBCCEEEEEEETT
T ss_pred HHHHHHHHHhCCCeEEEEECCCccccCCCCCcEEEEEEEcC
Confidence 34566666677777666443322334322 3455555554
No 269
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.50 E-value=6.9e-06 Score=78.96 Aligned_cols=151 Identities=14% Similarity=-0.005 Sum_probs=94.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-----CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC---Cc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-----GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ---DL 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-----g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~---~~ 191 (281)
..+.+|||.+||||.+.+.+++. ..+++|+|+ +.++.+++.|+..++... .++.+.. ++.... ..
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~---~~~~I~~---gDtL~~d~p~~ 293 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI---ENQFLHN---ADTLDEDWPTQ 293 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG---GGEEEEE---SCTTTSCSCCS
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc---CccceEe---cceeccccccc
Confidence 46789999999999877777664 457999999 889999999999987641 2444444 333322 12
Q ss_pred CCCCCcEEEEccccCCC-----------------------CcHHHHHHHHHHhhC-CCcEEEEEEeee---ChhHHHHHH
Q 023543 192 IQPLPDYVLGSDVIYSE-----------------------GAVGDLLDTLLQLCG-TQTTIFLAGELR---NDSVLEYFL 244 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~-----------------------~~~~~ll~~l~~ll~-~~g~~~l~~~~r---~~~~~~~fl 244 (281)
...+||+||++.+.-.. ..--.++..+.++|+ ++|++.+..+.. .......+.
T Consensus 294 ~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iR 373 (542)
T 3lkd_A 294 EPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIR 373 (542)
T ss_dssp SCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHH
T ss_pred ccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHH
Confidence 34679999986543210 001248888999999 999977665532 112223455
Q ss_pred HHHhcCCeEEEEecCCCCCCCCCC--cEEEEEEEec
Q 023543 245 EAAMKDFVIGRVEQTQWHPDYCSP--RVVVYILVKK 278 (281)
Q Consensus 245 ~~~~~~f~v~~i~~~~~~~~~~~~--~~~i~~~~~k 278 (281)
+.+.+.+.+..+-.-. ...|... ...|+.+.|+
T Consensus 374 k~Lle~~~l~~II~LP-~~lF~~t~i~t~Ilvl~K~ 408 (542)
T 3lkd_A 374 KALLEEGAIDTVIGLP-ANIFFNTSIPTTVIILKKN 408 (542)
T ss_dssp HHHHHTTCEEEEEECC-SSCSSSCCCCEEEEEECSS
T ss_pred HHHHhCCceeEEEEcc-ccccCCCCCcEEEEEEecC
Confidence 5555666666553321 1223333 3455555553
No 270
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.49 E-value=1.2e-07 Score=82.86 Aligned_cols=82 Identities=17% Similarity=0.293 Sum_probs=55.0
Q ss_pred CeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCC----CCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 124 KKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDL----RGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 124 ~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~----~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.+|||+|||+|..++.+|..|++|+++|. +.+..+++.|++........ ..++.+...|-.+... .+ ..+||+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~-~~-~~~fDv 167 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALT-DI-TPRPQV 167 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHST-TC-SSCCSE
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHH-hC-cccCCE
Confidence 79999999999999999999999999999 77777777776543211000 0256777644322111 11 236998
Q ss_pred EEEccccCCC
Q 023543 199 VLGSDVIYSE 208 (281)
Q Consensus 199 Iia~d~iy~~ 208 (281)
|+ .|..|..
T Consensus 168 V~-lDP~y~~ 176 (258)
T 2oyr_A 168 VY-LDPMFPH 176 (258)
T ss_dssp EE-ECCCCCC
T ss_pred EE-EcCCCCC
Confidence 76 4566654
No 271
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.45 E-value=1.6e-06 Score=72.81 Aligned_cols=115 Identities=21% Similarity=0.131 Sum_probs=74.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-CCEEEEEec-hhHHHHHHHHHHHhhc--CCCCCCceEEEEEecCCC------C---
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLR--HGDLRGSAVVTELTWGDD------P--- 187 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-g~~V~~tD~-~~~l~~~~~N~~~n~~--~~~~~~~i~~~~l~w~~~------~--- 187 (281)
.+.++|||+||| ..++.+|+. +.+|+.+|. ++..+.+++|++.++. . +++.+...+.++. .
T Consensus 29 ~~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~----~~I~~~~gda~~~~~wg~p~~~~ 102 (202)
T 3cvo_A 29 EEAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEG----TEVNIVWTDIGPTGDWGHPVSDA 102 (202)
T ss_dssp HHCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTT----CEEEEEECCCSSBCGGGCBSSST
T ss_pred hCCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCC----CceEEEEeCchhhhcccccccch
Confidence 356899999985 678888876 689999999 7889999999999886 3 4677766542211 1
Q ss_pred -----CC------Cc-CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe-eeC-hhHHHHHHHH
Q 023543 188 -----DQ------DL-IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE-LRN-DSVLEYFLEA 246 (281)
Q Consensus 188 -----~~------~~-~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~-~r~-~~~~~~fl~~ 246 (281)
+. .. ...+||+|+.-.-- ....+..+.++|++||++++-.. .|. ....+.|+..
T Consensus 103 ~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k-----~~~~~~~~l~~l~~GG~Iv~DNv~~r~~y~~v~~~~~~ 170 (202)
T 3cvo_A 103 KWRSYPDYPLAVWRTEGFRHPDVVLVDGRF-----RVGCALATAFSITRPVTLLFDDYSQRRWQHQVEEFLGA 170 (202)
T ss_dssp TGGGTTHHHHGGGGCTTCCCCSEEEECSSS-----HHHHHHHHHHHCSSCEEEEETTGGGCSSGGGGHHHHCC
T ss_pred hhhhHHHHhhhhhccccCCCCCEEEEeCCC-----chhHHHHHHHhcCCCeEEEEeCCcCCcchHHHHHHHhH
Confidence 00 01 12689998863211 12444445689999998855442 232 2234556643
No 272
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.40 E-value=8.8e-07 Score=70.18 Aligned_cols=54 Identities=28% Similarity=0.436 Sum_probs=43.8
Q ss_pred cCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcC-HHHHHHHH-cCCEEEEEec-hhHHH
Q 023543 95 TGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCG-LVGCIAAL-LGAQVILTDL-PDRLR 157 (281)
Q Consensus 95 tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG-~~~i~~a~-~g~~V~~tD~-~~~l~ 157 (281)
-|+++|+ .|++|+.+. ...+.+|||+|||.| .++..++. .|..|++||+ +.+++
T Consensus 17 ~~~~m~e---~LaeYI~~~------~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 17 RGSHMWN---DLAVYIIRC------SGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG 73 (153)
T ss_dssp CCCHHHH---HHHHHHHHH------SCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT
T ss_pred chhhHHH---HHHHHHHhc------CCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc
Confidence 3667755 489999875 234679999999999 59999997 9999999999 77755
No 273
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.37 E-value=4.7e-07 Score=88.49 Aligned_cols=99 Identities=16% Similarity=0.129 Sum_probs=66.6
Q ss_pred CCeEEEECCCcCHHHHH---HHH-cC-----------CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCC
Q 023543 123 GKKIVELGSGCGLVGCI---AAL-LG-----------AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD 186 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~---~a~-~g-----------~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~ 186 (281)
++.|||+|||+|.++.. +++ .+ .+|+++|. +.++..+++... |+.. +++.+..-+-.+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~----d~VtVI~gd~ee- 483 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWK----RRVTIIESDMRS- 483 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTT----TCSEEEESCGGG-
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCC----CeEEEEeCchhh-
Confidence 45899999999999643 332 22 27999999 555544444433 7765 568888744322
Q ss_pred CCCCcC-----CCCCcEEEEccccCC--CCcHHHHHHHHHHhhCCCcEEE
Q 023543 187 PDQDLI-----QPLPDYVLGSDVIYS--EGAVGDLLDTLLQLCGTQTTIF 229 (281)
Q Consensus 187 ~~~~~~-----~~~fD~Iia~d~iy~--~~~~~~ll~~l~~ll~~~g~~~ 229 (281)
..++ .++.|+||+--+-|. .+..+.++..+.+.|+|+|+++
T Consensus 484 --v~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 484 --LPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp --HHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred --cccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 1221 468999998555443 3456778888899999999754
No 274
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.35 E-value=3.5e-07 Score=81.66 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=55.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcC---CC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLI---QP 194 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~---~~ 194 (281)
.++++|||+|||+|..++.++.. +.+|+++|+ +++++.+++|+..++ . ++.+...++.+... .+. ..
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~-----~v~~v~~d~~~l~~-~l~~~g~~ 97 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-D-----RVSLFKVSYREADF-LLKTLGIE 97 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-T-----TEEEEECCGGGHHH-HHHHTTCS
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-C-----cEEEEECCHHHHHH-HHHhcCCC
Confidence 46789999999999999998875 579999999 899999999998875 2 57777765532110 011 14
Q ss_pred CCcEEEE
Q 023543 195 LPDYVLG 201 (281)
Q Consensus 195 ~fD~Iia 201 (281)
+||.|++
T Consensus 98 ~~D~Vl~ 104 (301)
T 1m6y_A 98 KVDGILM 104 (301)
T ss_dssp CEEEEEE
T ss_pred CCCEEEE
Confidence 6888775
No 275
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.34 E-value=2.7e-06 Score=75.43 Aligned_cols=120 Identities=13% Similarity=0.082 Sum_probs=71.5
Q ss_pred HHHHHhhhhccCccccCCCeEEEECCCc------CHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCce
Q 023543 106 LGKFLEHAVDSGMLLLHGKKIVELGSGC------GLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSA 176 (281)
Q Consensus 106 la~~l~~~~~~~~~~~~~~~VLELGcGt------G~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i 176 (281)
+++|+... .....++.+|||||||+ |. .+++... +.+|+++|+ +. + . ++
T Consensus 50 l~~~l~~~---~l~l~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~-v------------~-----~v 107 (290)
T 2xyq_A 50 LCQYLNTL---TLAVPYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF-V------------S-----DA 107 (290)
T ss_dssp HHHHHTTS---CCCCCTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC-B------------C-----SS
T ss_pred HHHHHHHh---hcCCCCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCC-C------------C-----CC
Confidence 66776311 01234678999999955 55 3333333 468999999 55 1 1 34
Q ss_pred EE-EEEecCCCCCCCcCCCCCcEEEEccccCC-----------CCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHH
Q 023543 177 VV-TELTWGDDPDQDLIQPLPDYVLGSDVIYS-----------EGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFL 244 (281)
Q Consensus 177 ~~-~~l~w~~~~~~~~~~~~fD~Iia~d~iy~-----------~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl 244 (281)
.+ ...|+.+.. ...+||+|++.-.... ....+.+++.+.++|+|||.+++........ +.+.
T Consensus 108 ~~~i~gD~~~~~----~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~--~~l~ 181 (290)
T 2xyq_A 108 DSTLIGDCATVH----TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN--ADLY 181 (290)
T ss_dssp SEEEESCGGGCC----CSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC--HHHH
T ss_pred EEEEECccccCC----ccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCH--HHHH
Confidence 45 665554321 1257999997422110 2335689999999999999998865332221 2355
Q ss_pred HHHhc-CCeE
Q 023543 245 EAAMK-DFVI 253 (281)
Q Consensus 245 ~~~~~-~f~v 253 (281)
+.+.+ +|..
T Consensus 182 ~~l~~~GF~~ 191 (290)
T 2xyq_A 182 KLMGHFSWWT 191 (290)
T ss_dssp HHHTTEEEEE
T ss_pred HHHHHcCCcE
Confidence 55554 4753
No 276
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.34 E-value=1.8e-06 Score=74.95 Aligned_cols=76 Identities=14% Similarity=0.149 Sum_probs=53.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcC-CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g-~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~ 198 (281)
.++.+|||+|||+|.++..++..+ .+|+++|+ +.+++.+++| . . .++.+...|..+ ..+.+...++
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~----~----~~v~~i~~D~~~---~~~~~~~~~~ 97 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G----D----ERLEVINEDASK---FPFCSLGKEL 97 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C----C----TTEEEECSCTTT---CCGGGSCSSE
T ss_pred CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c----C----CCeEEEEcchhh---CChhHccCCc
Confidence 467899999999999999999985 78999999 8899999877 1 1 356666644332 2222111144
Q ss_pred EEEccccCCC
Q 023543 199 VLGSDVIYSE 208 (281)
Q Consensus 199 Iia~d~iy~~ 208 (281)
++.++..|+.
T Consensus 98 ~vv~NlPy~i 107 (249)
T 3ftd_A 98 KVVGNLPYNV 107 (249)
T ss_dssp EEEEECCTTT
T ss_pred EEEEECchhc
Confidence 6666677764
No 277
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.30 E-value=1.4e-06 Score=76.91 Aligned_cols=55 Identities=18% Similarity=0.159 Sum_probs=45.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCE----EEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecC
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQ----VILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWG 184 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~----V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~ 184 (281)
.++.+|||+|||+|.++..++..+.+ |+++|+ +++++.+++|. . .++.+...|..
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~-------~~v~~i~~D~~ 100 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G-------ELLELHAGDAL 100 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G-------GGEEEEESCGG
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C-------CCcEEEECChh
Confidence 46789999999999999999988777 999999 88999999883 1 25777776554
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.26 E-value=9.8e-06 Score=77.95 Aligned_cols=148 Identities=10% Similarity=-0.011 Sum_probs=90.8
Q ss_pred CeEEEECCCcCHHHHHHHHc-----------------CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCC
Q 023543 124 KKIVELGSGCGLVGCIAALL-----------------GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (281)
Q Consensus 124 ~~VLELGcGtG~~~i~~a~~-----------------g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~ 185 (281)
.+|||.+||||.+.+.+++. ..+++|+|+ +.++.+++.|+..+++. .++. +.+++
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~----~~i~---i~~gD 318 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID----FNFG---KKNAD 318 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC----CBCC---SSSCC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC----cccc---eeccc
Confidence 39999999999776665431 347999999 88999999999998865 1221 12333
Q ss_pred CCCC-CcCCCCCcEEEEccccCCC-----------------------------CcHHHHHHHHHHhhCCCcEEEEEEee-
Q 023543 186 DPDQ-DLIQPLPDYVLGSDVIYSE-----------------------------GAVGDLLDTLLQLCGTQTTIFLAGEL- 234 (281)
Q Consensus 186 ~~~~-~~~~~~fD~Iia~d~iy~~-----------------------------~~~~~ll~~l~~ll~~~g~~~l~~~~- 234 (281)
.... .....+||+||++.+.-.. ..--.+++.+.++|+++|++.+..+.
T Consensus 319 tL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 319 SFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp TTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred hhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 3222 1234679999987654321 01125888899999999997766543
Q ss_pred ---eChhHHHHHHHHHhcCCeEEEEecCCCCCCCCC--CcEEEEEEEecC
Q 023543 235 ---RNDSVLEYFLEAAMKDFVIGRVEQTQWHPDYCS--PRVVVYILVKKL 279 (281)
Q Consensus 235 ---r~~~~~~~fl~~~~~~f~v~~i~~~~~~~~~~~--~~~~i~~~~~k~ 279 (281)
+.......+-+.+.+.+.+..+-.-. ...|.. -...|+.+.|++
T Consensus 399 ~L~~~~~~~~~iRk~Lle~~~l~aII~LP-~~lF~~t~i~t~Ilvl~K~k 447 (544)
T 3khk_A 399 SMSSNTNNEGEIRKTLVEQDLVECMVALP-GQLFTNTQIPACIWFLTKDK 447 (544)
T ss_dssp HHHCCGGGHHHHHHHHHHTTCEEEEEECC-TTBCCSCSSCEEEEEEESCC
T ss_pred hhhcCcchHHHHHHHHHhCCcHhEEEECC-CCCCCCCCCCeEEEEEecCC
Confidence 22122334455555566665553321 122333 345566666643
No 279
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.17 E-value=7.4e-07 Score=77.50 Aligned_cols=54 Identities=15% Similarity=0.129 Sum_probs=42.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCE--EEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEec
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQ--VILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTW 183 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~--V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w 183 (281)
.++.+|||+|||+|.++. +++ +.+ |+++|+ +++++.+++|+..+ .++.+...|.
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~-------~~v~~i~~D~ 76 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG-------PKLTIYQQDA 76 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG-------GGEEEECSCG
T ss_pred CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC-------CceEEEECch
Confidence 467899999999999999 654 677 999999 88999999876542 2566666444
No 280
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.12 E-value=9.8e-06 Score=70.79 Aligned_cols=145 Identities=19% Similarity=0.077 Sum_probs=88.1
Q ss_pred cCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc-CC-EEEEEec-hhHHHHHHHHHHHhhcCCC
Q 023543 95 TGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-GA-QVILTDL-PDRLRLLKKNIENNLRHGD 171 (281)
Q Consensus 95 tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~-g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~ 171 (281)
+|...=.++..|.+..... ...++.+|||||||+|-.+..++.. +. .|++.|+ -++...... ...
T Consensus 52 ~~~YrSRaA~KL~ei~ek~-----~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~-----~~~-- 119 (277)
T 3evf_A 52 TGVAVSRGTAKLRWFHERG-----YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN-----VQS-- 119 (277)
T ss_dssp SCBCSSTHHHHHHHHHHTT-----SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC-----CCB--
T ss_pred CCCccccHHHHHHHHHHhC-----CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc-----cCc--
Confidence 4666777888888888763 2346779999999999999988864 54 5888887 332100000 000
Q ss_pred CCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCCCCc----H---HHHHHHHHHhhCCC-cEEEEEEeeeC-hhHHHH
Q 023543 172 LRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSEGA----V---GDLLDTLLQLCGTQ-TTIFLAGELRN-DSVLEY 242 (281)
Q Consensus 172 ~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~----~---~~ll~~l~~ll~~~-g~~~l~~~~r~-~~~~~~ 242 (281)
...++.... ++.....+.+.+||+|++ |+.-+... . -.|++.+.+.|+|| |.+++ -..+. ...+..
T Consensus 120 ~g~~ii~~~---~~~dv~~l~~~~~DlVls-D~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~-KVf~pyg~~~~~ 194 (277)
T 3evf_A 120 LGWNIITFK---DKTDIHRLEPVKCDTLLC-DIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV-KVLAPYMPDVLE 194 (277)
T ss_dssp TTGGGEEEE---CSCCTTTSCCCCCSEEEE-CCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE-EESCTTSHHHHH
T ss_pred CCCCeEEEe---ccceehhcCCCCccEEEe-cCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE-EecCCCCccHHH
Confidence 000222222 111122345678999987 55333111 1 13578888999999 98776 44451 344567
Q ss_pred HHHHHhcCCeEEEE
Q 023543 243 FLEAAMKDFVIGRV 256 (281)
Q Consensus 243 fl~~~~~~f~v~~i 256 (281)
|+..+++.|.-..+
T Consensus 195 l~~~lk~~F~~V~~ 208 (277)
T 3evf_A 195 KLELLQRRFGGTVI 208 (277)
T ss_dssp HHHHHHHHHCCEEE
T ss_pred HHHHHHHhcCCEEE
Confidence 88888888874444
No 281
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.98 E-value=0.00016 Score=64.06 Aligned_cols=135 Identities=7% Similarity=-0.046 Sum_probs=87.7
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.+.++||=||-|.|.+.-.+.+. ..+|+++|+ +.+++.+++-+.......-...++.+..-|...... -...+||
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~--~~~~~yD 159 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVN--QTSQTFD 159 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTS--CSSCCEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHh--hccccCC
Confidence 35689999999999888777764 357999999 888999998764321110012567777755433222 2346899
Q ss_pred EEEE--ccccCCCC--cHHHHHHHHHHhhCCCcEEEEEEee--eChhHHHHHHHHHhcCCeEEEEe
Q 023543 198 YVLG--SDVIYSEG--AVGDLLDTLLQLCGTQTTIFLAGEL--RNDSVLEYFLEAAMKDFVIGRVE 257 (281)
Q Consensus 198 ~Iia--~d~iy~~~--~~~~ll~~l~~ll~~~g~~~l~~~~--r~~~~~~~fl~~~~~~f~v~~i~ 257 (281)
+||. .|...... .-..+++.+++.|+|+|++..-... -....+...++.+++-|......
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~~~ 225 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFY 225 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCceeee
Confidence 9985 33322211 1367899999999999987653322 23344556677777777655443
No 282
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.97 E-value=1.5e-05 Score=70.60 Aligned_cols=46 Identities=22% Similarity=0.304 Sum_probs=42.8
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHh
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENN 166 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n 166 (281)
.+|..|||++||+|.++++++++|.+++++|+ +++++.+++|+...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 46889999999999999999999999999999 88999999998775
No 283
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.95 E-value=2.8e-05 Score=71.31 Aligned_cols=114 Identities=12% Similarity=0.037 Sum_probs=72.1
Q ss_pred CCeEEEECCCcCHHHHHHHH------------c-----CCEEEEEech-hHHHHHHHHHHHhhcCC-------CCCCceE
Q 023543 123 GKKIVELGSGCGLVGCIAAL------------L-----GAQVILTDLP-DRLRLLKKNIENNLRHG-------DLRGSAV 177 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~------------~-----g~~V~~tD~~-~~l~~~~~N~~~n~~~~-------~~~~~i~ 177 (281)
.-+|+|||||+|..++.+.. . ..+|...|++ .....+=+++....... .......
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 56899999999988876621 1 2369999994 33433333332211000 0000111
Q ss_pred EEEEecCCCCCCCcCCCCCcEEEEccccCCCC--------------------------------------cHHHHHHHHH
Q 023543 178 VTELTWGDDPDQDLIQPLPDYVLGSDVIYSEG--------------------------------------AVGDLLDTLL 219 (281)
Q Consensus 178 ~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~--------------------------------------~~~~ll~~l~ 219 (281)
+....-+......+++.+||+|.++-++|+.+ ++..+++..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222233334456778999999999999844 4455788899
Q ss_pred HhhCCCcEEEEEEeeeC
Q 023543 220 QLCGTQTTIFLAGELRN 236 (281)
Q Consensus 220 ~ll~~~g~~~l~~~~r~ 236 (281)
+.|+|||+++++...|.
T Consensus 213 ~eL~pGG~mvl~~~gr~ 229 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRT 229 (374)
T ss_dssp HHEEEEEEEEEEEEECC
T ss_pred HHhCCCCEEEEEEecCC
Confidence 99999999998887764
No 284
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.86 E-value=0.0001 Score=67.23 Aligned_cols=138 Identities=19% Similarity=0.123 Sum_probs=90.5
Q ss_pred chHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCC--EEEEEec-hhHHHHHHHHHHHhhcCC-CCCCce
Q 023543 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHG-DLRGSA 176 (281)
Q Consensus 101 ~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~--~V~~tD~-~~~l~~~~~N~~~n~~~~-~~~~~i 176 (281)
.+|.+.+..|. ..+|.+|||++||.|-=++.++..+. .|++.|+ +..++.+++|+++.+... ....++
T Consensus 135 ~aS~l~~~~L~--------~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v 206 (359)
T 4fzv_A 135 AASLLPVLALG--------LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQV 206 (359)
T ss_dssp GGGHHHHHHHC--------CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSE
T ss_pred HHHHHHHHHhC--------CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCce
Confidence 56666665553 35788999999999977777776655 5999999 778999999999887641 122356
Q ss_pred EEEEEecCCCCCCCcCCCCCcEEEE----cc---ccCC-C----------------CcHHHHHHHHHHhhCCCcEEEEE-
Q 023543 177 VVTELTWGDDPDQDLIQPLPDYVLG----SD---VIYS-E----------------GAVGDLLDTLLQLCGTQTTIFLA- 231 (281)
Q Consensus 177 ~~~~l~w~~~~~~~~~~~~fD~Iia----~d---~iy~-~----------------~~~~~ll~~l~~ll~~~g~~~l~- 231 (281)
.+...|.... .......||.|+. +. .+.. . .....++....++++|||+++.+
T Consensus 207 ~v~~~D~~~~--~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 207 RVTSWDGRKW--GELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp EEECCCGGGH--HHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEeCchhhc--chhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 6665442111 0123467999986 11 1111 1 11346778888899999986544
Q ss_pred Eee---eChhHHHHHHHHHh
Q 023543 232 GEL---RNDSVLEYFLEAAM 248 (281)
Q Consensus 232 ~~~---r~~~~~~~fl~~~~ 248 (281)
+.. -|..+++.|++...
T Consensus 285 CSl~~~ENE~vV~~~L~~~~ 304 (359)
T 4fzv_A 285 CSLSHLQNEYVVQGAIELLA 304 (359)
T ss_dssp SCCCTTTTHHHHHHHHHHHH
T ss_pred CCCchhhCHHHHHHHHHhCC
Confidence 433 35667788887654
No 285
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.85 E-value=7.8e-05 Score=68.49 Aligned_cols=112 Identities=20% Similarity=0.143 Sum_probs=70.4
Q ss_pred CCeEEEECCCcCHHHHHHHHc--------------C-----CEEEEEech--hH---HHHH---HHHHHH-hhcCCCCCC
Q 023543 123 GKKIVELGSGCGLVGCIAALL--------------G-----AQVILTDLP--DR---LRLL---KKNIEN-NLRHGDLRG 174 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~~--------------g-----~~V~~tD~~--~~---l~~~---~~N~~~-n~~~~~~~~ 174 (281)
.-+|+||||++|..++.+... + .+|+..|++ +- ...+ .+.+.. ++.. .+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~---~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRK---IG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCC---TT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCC---CC
Confidence 468999999999888765432 1 258999995 21 2222 222211 2211 11
Q ss_pred ceEEEEEecCCCCCCCcCCCCCcEEEEccccCCCCcH---------------------------------------HHHH
Q 023543 175 SAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSEGAV---------------------------------------GDLL 215 (281)
Q Consensus 175 ~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~---------------------------------------~~ll 215 (281)
. .+....-+......+++.++|+|.++.+++|-+.. ..++
T Consensus 130 ~-~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL 208 (384)
T 2efj_A 130 S-CLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFL 208 (384)
T ss_dssp S-EEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred c-eEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2 33333334444556778899999999999983322 1236
Q ss_pred HHHHHhhCCCcEEEEEEeeeChh
Q 023543 216 DTLLQLCGTQTTIFLAGELRNDS 238 (281)
Q Consensus 216 ~~l~~ll~~~g~~~l~~~~r~~~ 238 (281)
+...+-|+|||++++....|...
T Consensus 209 ~~Ra~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 209 RIHSEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHHHHEEEEEEEEEEEECCCTT
T ss_pred HHHHHHhccCCeEEEEEecCCCc
Confidence 67789999999999988776543
No 286
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.83 E-value=7.5e-06 Score=71.93 Aligned_cols=128 Identities=12% Similarity=0.014 Sum_probs=95.2
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC-cCCCCCcE
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-LIQPLPDY 198 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~-~~~~~fD~ 198 (281)
+.+..+||+=+|||.+|+.+...+.+++++|. +..++.+++|++.. .++.+...|-....... -..++||+
T Consensus 90 ~n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~-------~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 90 INLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFN-------KKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp HSSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTT-------SCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred hcCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcC-------CcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 56788999999999999998887778999999 88999999998651 35666664421100000 01246996
Q ss_pred EEEccccCC-CCcHHHHHHHHHH--hhCCCcEEEEEEeeeChhHHHHHHHHHhc-CCeEEEE
Q 023543 199 VLGSDVIYS-EGAVGDLLDTLLQ--LCGTQTTIFLAGELRNDSVLEYFLEAAMK-DFVIGRV 256 (281)
Q Consensus 199 Iia~d~iy~-~~~~~~ll~~l~~--ll~~~g~~~l~~~~r~~~~~~~fl~~~~~-~f~v~~i 256 (281)
|+ .|.-|. ....+.+++.+.+ .+.++|++++=++.......+.|.+.+++ +.++-.+
T Consensus 163 Vf-iDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~~~~~~~l~~ 223 (283)
T 2oo3_A 163 IF-IDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISSKSVRI 223 (283)
T ss_dssp EE-ECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHHHHCSSEEEE
T ss_pred EE-ECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHHHhcCCCeEEE
Confidence 55 788888 5789999988887 45799999999999888888889988863 4444333
No 287
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.82 E-value=2.6e-05 Score=67.85 Aligned_cols=129 Identities=13% Similarity=-0.037 Sum_probs=71.2
Q ss_pred CCCeEEEECCCcCHHHHHHHHc-------C-------CEEEEEec-h---hHHH-----------HHHHHHHHhhcCC--
Q 023543 122 HGKKIVELGSGCGLVGCIAALL-------G-------AQVILTDL-P---DRLR-----------LLKKNIENNLRHG-- 170 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~-------g-------~~V~~tD~-~---~~l~-----------~~~~N~~~n~~~~-- 170 (281)
++.+|||+|+|+|+..+.++.. + .+|+++|. + +.+. .++.++.......
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3469999999999988775542 2 26999998 6 3333 4555555421100
Q ss_pred -------CCCCceEEEEEecCCCCCCCcC---CCCCcEEEEccccC---CCCc-HHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 171 -------DLRGSAVVTELTWGDDPDQDLI---QPLPDYVLGSDVIY---SEGA-VGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 171 -------~~~~~i~~~~l~w~~~~~~~~~---~~~fD~Iia~d~iy---~~~~-~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
....++.+...|..+.... +. ..+||+|.. |..- +++. .+.+++.+.++|+|||++.. +..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~-~~~~~~~~~D~ifl-D~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t-ysa-- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQ-LDDSLNQKVDAWFL-DGFAPAKNPDMWTQNLFNAMARLARPGGTLAT-FTS-- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGG-SCGGGTTCEEEEEE-CSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE-SCC--
T ss_pred hhheeccCCceEEEEEECcHHHHHhh-cccccCCeEEEEEE-CCCCcccChhhcCHHHHHHHHHHcCCCcEEEE-EeC--
Confidence 0001222332222111111 11 137998886 4321 2221 46799999999999998753 222
Q ss_pred hhHHHHHHHHHh-cCCeEEEEec
Q 023543 237 DSVLEYFLEAAM-KDFVIGRVEQ 258 (281)
Q Consensus 237 ~~~~~~fl~~~~-~~f~v~~i~~ 258 (281)
... +...+. .||.+++++.
T Consensus 215 a~~---vrr~L~~aGF~v~~~~g 234 (257)
T 2qy6_A 215 AGF---VRRGLQEAGFTMQKRKG 234 (257)
T ss_dssp BHH---HHHHHHHHTEEEEEECC
T ss_pred CHH---HHHHHHHCCCEEEeCCC
Confidence 122 223333 5999988754
No 288
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.77 E-value=0.00032 Score=63.90 Aligned_cols=75 Identities=15% Similarity=0.037 Sum_probs=50.5
Q ss_pred ccCCCeEEEECCCcCHHHHHHHHcCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 120 LLHGKKIVELGSGCGLVGCIAALLGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
..+|.+||||||.+|-.+-.+++.|++|+++|...+-..+. .+ .++.+..-| .+.......+||+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~l~----~~-------~~V~~~~~d---~~~~~~~~~~~D~v 274 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLM----DT-------GQVTWLRED---GFKFRPTRSNISWM 274 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHHHH----TT-------TCEEEECSC---TTTCCCCSSCEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChhhc----cC-------CCeEEEeCc---cccccCCCCCcCEE
Confidence 35789999999999999999999999999999844322211 11 356555533 33333344689987
Q ss_pred EEccccCCCC
Q 023543 200 LGSDVIYSEG 209 (281)
Q Consensus 200 ia~d~iy~~~ 209 (281)
++ |+.-++.
T Consensus 275 vs-Dm~~~p~ 283 (375)
T 4auk_A 275 VC-DMVEKPA 283 (375)
T ss_dssp EE-CCSSCHH
T ss_pred EE-cCCCChH
Confidence 75 6654443
No 289
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.76 E-value=5.9e-05 Score=65.50 Aligned_cols=48 Identities=15% Similarity=0.127 Sum_probs=42.5
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhc
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLR 168 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~ 168 (281)
.+|..|||..||+|..++++.++|.+++++|+ +..++.+++|+..+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 47889999999999999999999999999999 8889999999988754
No 290
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.74 E-value=3.7e-05 Score=67.25 Aligned_cols=144 Identities=16% Similarity=0.013 Sum_probs=85.7
Q ss_pred CceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCC
Q 023543 96 GSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDL 172 (281)
Q Consensus 96 G~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~ 172 (281)
|...=.++..|.+..++. ...++.+|||||||.|-.+.++++ .++ .|+++|+ .++...+... ...+
T Consensus 69 g~YrSRAAfKL~ei~eK~-----~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g----- 137 (282)
T 3gcz_A 69 GIAVSRGSAKLRWMEERG-----YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG----- 137 (282)
T ss_dssp SBCSSTHHHHHHHHHHTT-----SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT-----
T ss_pred CCEecHHHHHHHHHHHhc-----CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC-----
Confidence 555566788888877753 245677999999999999998885 455 5899999 4431111000 0000
Q ss_pred CCceEEEEEecCCCCCCCcCCCCCcEEEEccccCCCCc-------HHHHHHHHHHhhCCC--cEEEEEEeee-ChhHHHH
Q 023543 173 RGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSEGA-------VGDLLDTLLQLCGTQ--TTIFLAGELR-NDSVLEY 242 (281)
Q Consensus 173 ~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~-------~~~ll~~l~~ll~~~--g~~~l~~~~r-~~~~~~~ 242 (281)
.++.... .+.....+...++|+|++ |.--+... .-.|++.+.+.|+|| |.+++- ..+ ....+..
T Consensus 138 -~~ii~~~---~~~dv~~l~~~~~DvVLS-DmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K-vF~pyg~~~~~ 211 (282)
T 3gcz_A 138 -WNLIRFK---DKTDVFNMEVIPGDTLLC-DIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK-VLCPYTPLIME 211 (282)
T ss_dssp -GGGEEEE---CSCCGGGSCCCCCSEEEE-CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE-ESCCCSHHHHH
T ss_pred -CceEEee---CCcchhhcCCCCcCEEEe-cCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE-EecCCCccHHH
Confidence 1121111 111112345678999887 44433111 123677788899999 886553 444 1344567
Q ss_pred HHHHHhcCCeEEEE
Q 023543 243 FLEAAMKDFVIGRV 256 (281)
Q Consensus 243 fl~~~~~~f~v~~i 256 (281)
|+..+++.|.-..+
T Consensus 212 l~~~lk~~F~~V~~ 225 (282)
T 3gcz_A 212 ELSRLQLKHGGGLV 225 (282)
T ss_dssp HHHHHHHHHCCEEE
T ss_pred HHHHHHHhcCCEEE
Confidence 88888888874444
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.67 E-value=0.0033 Score=60.08 Aligned_cols=159 Identities=9% Similarity=0.015 Sum_probs=93.4
Q ss_pred HHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc---------------CCEEEEEec-hhHHHHHHHHHHHhhcC
Q 023543 106 LGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL---------------GAQVILTDL-PDRLRLLKKNIENNLRH 169 (281)
Q Consensus 106 la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~---------------g~~V~~tD~-~~~l~~~~~N~~~n~~~ 169 (281)
+++++.+.+. ...+.+|+|-.||||.+-+.+... ...++|.|+ +.+..+++-|+..++..
T Consensus 205 Vv~lmv~l~~----p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~ 280 (530)
T 3ufb_A 205 VVRFMVEVMD----PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE 280 (530)
T ss_dssp HHHHHHHHHC----CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHhhc----cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc
Confidence 4455554432 246779999999999665555431 235999999 88899999999998875
Q ss_pred CCCCCceEEEEEecCCCCCCC----cCCCCCcEEEEccccCCC----------------CcHHHHHHHHHHhhC------
Q 023543 170 GDLRGSAVVTELTWGDDPDQD----LIQPLPDYVLGSDVIYSE----------------GAVGDLLDTLLQLCG------ 223 (281)
Q Consensus 170 ~~~~~~i~~~~l~w~~~~~~~----~~~~~fD~Iia~d~iy~~----------------~~~~~ll~~l~~ll~------ 223 (281)
. . .+.+++..... ....+||+||++.+.-.. ..--.+++.+.+.|+
T Consensus 281 ~-----~---~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l 352 (530)
T 3ufb_A 281 Y-----P---RIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGS 352 (530)
T ss_dssp C-----C---EEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSS
T ss_pred c-----c---cccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhcc
Confidence 1 1 23344433321 123579999997665211 112345666667776
Q ss_pred -CCcEEEEEEee----eChhHHHHHHHHHhcCCeEEEEecCCCCCCCC---CCcEEEEEEEec
Q 023543 224 -TQTTIFLAGEL----RNDSVLEYFLEAAMKDFVIGRVEQTQWHPDYC---SPRVVVYILVKK 278 (281)
Q Consensus 224 -~~g~~~l~~~~----r~~~~~~~fl~~~~~~f~v~~i~~~~~~~~~~---~~~~~i~~~~~k 278 (281)
+||++.++.+. ++. ....+-+.+.+.+.+..|-.-+- ..|. .-...|+.+.|+
T Consensus 353 ~~gGr~avVlP~g~Lf~~~-~~~~iRk~Lle~~~l~aII~LP~-~~F~~~tgi~t~Il~~~K~ 413 (530)
T 3ufb_A 353 DNGGRAAVVVPNGTLFSDG-ISARIKEELLKNFNLHTIVRLPE-GVFAPYTDIAGNLLFFDRS 413 (530)
T ss_dssp SSCCEEEEEEEHHHHHCCT-HHHHHHHHHHHHSEEEEEEECCT-TTTTTTCCCCEEEEEEESS
T ss_pred CCCceEEEEecchhhhccc-hHHHHHHHHhhcCEEEEEEECCc-ccCcCCCCCcEEEEEEECC
Confidence 68987666553 222 22334455556677666643211 1222 234556666664
No 292
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.67 E-value=0.0028 Score=55.76 Aligned_cols=145 Identities=17% Similarity=0.070 Sum_probs=86.8
Q ss_pred cCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc-CC-EEEEEec-hhHHHHHHHHHHHhhcCCC
Q 023543 95 TGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-GA-QVILTDL-PDRLRLLKKNIENNLRHGD 171 (281)
Q Consensus 95 tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~-g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~ 171 (281)
+|...=.++..|.+..... ...++++||||||++|-.+-.++.. ++ .|+++|+ ..+...... +..
T Consensus 59 ~g~yrSRaa~KL~ei~ek~-----l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~------ 126 (300)
T 3eld_A 59 VGISVSRGAAKIRWLHERG-----YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQT------ 126 (300)
T ss_dssp SCCCSSTTHHHHHHHHHHT-----SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCB------
T ss_pred CCCccchHHHHHHHHHHhC-----CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccc------
Confidence 3555566788888877652 2457889999999999999999864 55 5999998 432100000 000
Q ss_pred CCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCCCCc-------HHHHHHHHHHhhCCC-cEEEEEEeee-ChhHHHH
Q 023543 172 LRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSEGA-------VGDLLDTLLQLCGTQ-TTIFLAGELR-NDSVLEY 242 (281)
Q Consensus 172 ~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~-------~~~ll~~l~~ll~~~-g~~~l~~~~r-~~~~~~~ 242 (281)
...++.... .......+...++|+|++ |+.-+... ...|++.+.+.|+|| |.+++- ..+ .......
T Consensus 127 ~~~~iv~~~---~~~di~~l~~~~~DlVls-D~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K-vF~~yG~~~~~ 201 (300)
T 3eld_A 127 LGWNIVKFK---DKSNVFTMPTEPSDTLLC-DIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK-VLAPYHPDVIE 201 (300)
T ss_dssp TTGGGEEEE---CSCCTTTSCCCCCSEEEE-CCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE-ESSTTSHHHHH
T ss_pred cCCceEEee---cCceeeecCCCCcCEEee-cCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE-eccccCccHHH
Confidence 001121111 111111234578999987 55544221 134688888999999 987654 445 1334567
Q ss_pred HHHHHhcCCeEEEE
Q 023543 243 FLEAAMKDFVIGRV 256 (281)
Q Consensus 243 fl~~~~~~f~v~~i 256 (281)
|+..++..|.-..+
T Consensus 202 ll~~lk~~F~~V~~ 215 (300)
T 3eld_A 202 KLERLQLRFGGGIV 215 (300)
T ss_dssp HHHHHHHHHCCEEE
T ss_pred HHHHHHHhCCcEEE
Confidence 88888888874444
No 293
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.64 E-value=0.00012 Score=64.47 Aligned_cols=105 Identities=13% Similarity=0.027 Sum_probs=72.6
Q ss_pred CCCeEEEECCCcCHHHHHHHHc-------CCEEEEEec-hh--------------------------HHHHHHHHHHHhh
Q 023543 122 HGKKIVELGSGCGLVGCIAALL-------GAQVILTDL-PD--------------------------RLRLLKKNIENNL 167 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~-------g~~V~~tD~-~~--------------------------~l~~~~~N~~~n~ 167 (281)
..++|||+|+..|..++.++.. +.+|+++|. .. .++.+++|++..+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 4679999999999988877642 567999995 21 3677899999887
Q ss_pred cCCCCCCceEEEEEecCCCCCCCcCCCCCcEEEE-ccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 168 RHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLG-SDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 168 ~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia-~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
+. .+++.+...+..+..+. +...+||+|.. +| .| ......++.+..+|+|||++++-..
T Consensus 186 l~---~~~I~li~Gda~etL~~-~~~~~~d~vfIDaD-~y--~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 186 LL---DEQVRFLPGWFKDTLPT-APIDTLAVLRMDGD-LY--ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CC---STTEEEEESCHHHHSTT-CCCCCEEEEEECCC-SH--HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CC---cCceEEEEeCHHHHHhh-CCCCCEEEEEEcCC-cc--ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 63 14788887554332222 23467897764 33 22 2345678888899999998776554
No 294
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.48 E-value=7.4e-05 Score=68.06 Aligned_cols=111 Identities=14% Similarity=0.055 Sum_probs=73.5
Q ss_pred CCeEEEECCCcCHHHHHHHHc------------C------CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEec
Q 023543 123 GKKIVELGSGCGLVGCIAALL------------G------AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTW 183 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~~------------g------~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w 183 (281)
.-+|+||||++|..++.+... + .+|+..|+ ......+-+++...... . ...+....-
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~---~-~~~f~~gvp 127 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDV---D-GVCFINGVP 127 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSC---T-TCEEEEEEE
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhccc---C-CCEEEEecc
Confidence 358999999999666543321 2 25999999 44566555554331100 0 123333333
Q ss_pred CCCCCCCcCCCCCcEEEEccccCCCCc---------------------------------HHHHHHHHHHhhCCCcEEEE
Q 023543 184 GDDPDQDLIQPLPDYVLGSDVIYSEGA---------------------------------VGDLLDTLLQLCGTQTTIFL 230 (281)
Q Consensus 184 ~~~~~~~~~~~~fD~Iia~d~iy~~~~---------------------------------~~~ll~~l~~ll~~~g~~~l 230 (281)
+......+++.++|+|.++-+++|-+. +..+++..++-|+|||++++
T Consensus 128 gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 128 GSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 444455677889999999999988322 34568889999999999998
Q ss_pred EEeeeCh
Q 023543 231 AGELRND 237 (281)
Q Consensus 231 ~~~~r~~ 237 (281)
....|..
T Consensus 208 ~~~gr~~ 214 (359)
T 1m6e_X 208 TILGRRS 214 (359)
T ss_dssp EEEECSS
T ss_pred EEecCCC
Confidence 8876643
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.34 E-value=0.00072 Score=58.36 Aligned_cols=139 Identities=16% Similarity=0.017 Sum_probs=77.5
Q ss_pred cCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHc--CCE----EEEEec--hhHHHHHHHHHHHh
Q 023543 95 TGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL--GAQ----VILTDL--PDRLRLLKKNIENN 166 (281)
Q Consensus 95 tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~--g~~----V~~tD~--~~~l~~~~~N~~~n 166 (281)
+|...=.++..|.+.-++. ...+|.+||||||+.|-.+.+++.. ... |+++|+ ..+... . .
T Consensus 51 ~g~yRSRAayKL~EIdeK~-----likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~-~-----~ 119 (269)
T 2px2_A 51 GGHPVSRGTAKLRWLVERR-----FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ-S-----Y 119 (269)
T ss_dssp CSCCSSTHHHHHHHHHHTT-----SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC-S-----T
T ss_pred CCCcccHHHHHHHHHHHcC-----CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc-C-----C
Confidence 4555555666666555432 3456889999999999999999886 223 455552 111000 0 0
Q ss_pred hcCCCCCCceEEEEE-ecCCCCCCCcCCCCCcEEEEccccCCCC--------cHHHHHHHHHHhhCCCc-EEEEEEeeeC
Q 023543 167 LRHGDLRGSAVVTEL-TWGDDPDQDLIQPLPDYVLGSDVIYSEG--------AVGDLLDTLLQLCGTQT-TIFLAGELRN 236 (281)
Q Consensus 167 ~~~~~~~~~i~~~~l-~w~~~~~~~~~~~~fD~Iia~d~iy~~~--------~~~~ll~~l~~ll~~~g-~~~l~~~~r~ 236 (281)
+. .-+.+... |..+ +...++|+|++ |.--+.. .+. .+..+.+.|+|+| .+++=.-.-.
T Consensus 120 Gv-----~~i~~~~G~Df~~-----~~~~~~DvVLS-DMAPnSG~~~vD~~Rs~~-aL~~A~~~Lk~gG~~FvvKVFqg~ 187 (269)
T 2px2_A 120 GW-----NIVTMKSGVDVFY-----KPSEISDTLLC-DIGESSPSAEIEEQRTLR-ILEMVSDWLSRGPKEFCIKILCPY 187 (269)
T ss_dssp TG-----GGEEEECSCCGGG-----SCCCCCSEEEE-CCCCCCSCHHHHHHHHHH-HHHHHHHHHTTCCSEEEEEESCTT
T ss_pred Cc-----eEEEeeccCCccC-----CCCCCCCEEEe-CCCCCCCccHHHHHHHHH-HHHHHHHHhhcCCcEEEEEECCCC
Confidence 10 11223222 3221 23458999885 3322211 122 5667778899999 6655322222
Q ss_pred hhHHHHHHHHHhcCCeEEEE
Q 023543 237 DSVLEYFLEAAMKDFVIGRV 256 (281)
Q Consensus 237 ~~~~~~fl~~~~~~f~v~~i 256 (281)
...+.++++.+++.|.-..+
T Consensus 188 ~~~~~~~l~~lk~~F~~vkv 207 (269)
T 2px2_A 188 MPKVIEKLESLQRRFGGGLV 207 (269)
T ss_dssp SHHHHHHHHHHHHHHCCEEE
T ss_pred chHHHHHHHHHHHHcCCEEE
Confidence 24556678888887875444
No 296
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.15 E-value=0.0014 Score=59.18 Aligned_cols=41 Identities=27% Similarity=0.190 Sum_probs=35.9
Q ss_pred CeEEEECCCcCHHHHHHHHcC--CE-EEEEec-hhHHHHHHHHHH
Q 023543 124 KKIVELGSGCGLVGCIAALLG--AQ-VILTDL-PDRLRLLKKNIE 164 (281)
Q Consensus 124 ~~VLELGcGtG~~~i~~a~~g--~~-V~~tD~-~~~l~~~~~N~~ 164 (281)
.+||||.||+|.+++.+...| ++ |.++|+ +.+++..+.|..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~ 47 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP 47 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc
Confidence 489999999999999999988 44 899999 888998888864
No 297
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.04 E-value=0.012 Score=51.77 Aligned_cols=127 Identities=14% Similarity=0.071 Sum_probs=74.6
Q ss_pred HHHHHHhhhhccCccccCCCeEEEECCCc--C-HH-HHHHHHc---CCEEEEEechhHHHHHHHHHHHhhcCCCCCCceE
Q 023543 105 VLGKFLEHAVDSGMLLLHGKKIVELGSGC--G-LV-GCIAALL---GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAV 177 (281)
Q Consensus 105 ~la~~l~~~~~~~~~~~~~~~VLELGcGt--G-~~-~i~~a~~---g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~ 177 (281)
-|++||... ......|.+|||||||+ | .+ +.++.+. |+.|+++|+.++.. . ..+
T Consensus 95 qlcqyl~~~---~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s-----------d----a~~- 155 (344)
T 3r24_A 95 QLCQYLNTL---TLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS-----------D----ADS- 155 (344)
T ss_dssp HHHHHHTTS---CCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC-----------S----SSE-
T ss_pred HHHHHhccc---cEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc-----------C----CCe-
Confidence 478888542 11235689999999854 2 22 3344443 35899999955411 0 011
Q ss_pred EEEEecCCCCCCCcCCCCCcEEEE---------ccccC--CCCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHH
Q 023543 178 VTELTWGDDPDQDLIQPLPDYVLG---------SDVIY--SEGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEA 246 (281)
Q Consensus 178 ~~~l~w~~~~~~~~~~~~fD~Iia---------~d~iy--~~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~ 246 (281)
+...|. .......+||+||+ .|.-. .....+..+..+.+.|+|||.+++=...... ..++..
T Consensus 156 ~IqGD~----~~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg---~~~L~~ 228 (344)
T 3r24_A 156 TLIGDC----ATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW---NADLYK 228 (344)
T ss_dssp EEESCG----GGEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC---CHHHHH
T ss_pred EEEccc----cccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC---HHHHHH
Confidence 233221 11223578999997 11111 2335788888899999999998765433222 235666
Q ss_pred HhcCCeEEEEe
Q 023543 247 AMKDFVIGRVE 257 (281)
Q Consensus 247 ~~~~f~v~~i~ 257 (281)
+++.|....+.
T Consensus 229 lrk~F~~VK~f 239 (344)
T 3r24_A 229 LMGHFSWWTAF 239 (344)
T ss_dssp HHTTEEEEEEE
T ss_pred HHhhCCeEEEE
Confidence 66788865554
No 298
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.85 E-value=0.0024 Score=58.30 Aligned_cols=131 Identities=18% Similarity=0.123 Sum_probs=77.2
Q ss_pred CCCeEEEECCCcCHHHHHHHHc-CCEEEEEec-hhHHHHHHHHHHHh-h--cCCCCCCceEEEEEecCCCCCC-CcCCCC
Q 023543 122 HGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENN-L--RHGDLRGSAVVTELTWGDDPDQ-DLIQPL 195 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~-g~~V~~tD~-~~~l~~~~~N~~~n-~--~~~~~~~~i~~~~l~w~~~~~~-~~~~~~ 195 (281)
+.++||=||-|.|...-.+.+. ..+|+++|+ +++++.+++-.... + .......++++..-|....... .-...+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 5689999999999887777764 447999999 88899998764221 1 1100012344444221100000 012357
Q ss_pred CcEEEEc--cccCCC--------CcHHHHHHHHHHhhCCCcEEEEEEee-eChhHHHHHHHHHhcCCe
Q 023543 196 PDYVLGS--DVIYSE--------GAVGDLLDTLLQLCGTQTTIFLAGEL-RNDSVLEYFLEAAMKDFV 252 (281)
Q Consensus 196 fD~Iia~--d~iy~~--------~~~~~ll~~l~~ll~~~g~~~l~~~~-r~~~~~~~fl~~~~~~f~ 252 (281)
||+||.- |..... -....+++.+++.|+|+|+++.-... ...+.+..+.+.+++-|.
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF~ 352 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYC 352 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSS
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHhCC
Confidence 9998852 211111 11367889999999999987653222 223445666777776554
No 299
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.84 E-value=0.016 Score=50.92 Aligned_cols=143 Identities=17% Similarity=0.039 Sum_probs=80.1
Q ss_pred cCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHH-cCCE-EEEEec-hhHHH--HHHHHHHHhhcC
Q 023543 95 TGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAAL-LGAQ-VILTDL-PDRLR--LLKKNIENNLRH 169 (281)
Q Consensus 95 tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~-~g~~-V~~tD~-~~~l~--~~~~N~~~n~~~ 169 (281)
+|...=.++..|.+..... ...++.+||||||++|-.+..++. .|++ |+++|+ ..--+ ... +..+..
T Consensus 72 ~g~y~SR~~~KL~ei~~~~-----~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~---~ql~w~ 143 (321)
T 3lkz_A 72 GGHPVSRGTAKLRWLVERR-----FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLV---QSYGWN 143 (321)
T ss_dssp SCCCSSTHHHHHHHHHHTT-----SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCC---CBTTGG
T ss_pred CCCccchHHHHHHHHHHhc-----CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchh---hhcCCc
Confidence 4666667777777776652 245677999999999999886665 5664 999999 33100 000 000000
Q ss_pred CCCCCceEEEEEecCCCCCCCcCCCCCcEEEEccccCCCCc--H-----HHHHHHHHHhhCCC-cEEEEEEeeeC-hhHH
Q 023543 170 GDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSEGA--V-----GDLLDTLLQLCGTQ-TTIFLAGELRN-DSVL 240 (281)
Q Consensus 170 ~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~--~-----~~ll~~l~~ll~~~-g~~~l~~~~r~-~~~~ 240 (281)
-+.+.. +-+. ..+...++|+|++ |+--.... . -.+++.+.+.|+++ |.+++ -.... ...+
T Consensus 144 -----lV~~~~---~~Dv-~~l~~~~~D~ivc-DigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~-KVl~pY~~~v 212 (321)
T 3lkz_A 144 -----IVTMKS---GVDV-FYRPSECCDTLLC-DIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV-KVLCPYMPKV 212 (321)
T ss_dssp -----GEEEEC---SCCT-TSSCCCCCSEEEE-CCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE-EESCTTSHHH
T ss_pred -----ceEEEe---ccCH-hhCCCCCCCEEEE-ECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE-EEcCCCChHH
Confidence 122222 1011 1223367997774 55532221 1 12566667788888 65443 23333 1344
Q ss_pred HHHHHHHhcCCeEEEE
Q 023543 241 EYFLEAAMKDFVIGRV 256 (281)
Q Consensus 241 ~~fl~~~~~~f~v~~i 256 (281)
..+++.++..|.-..+
T Consensus 213 ~e~l~~lq~~fgg~lv 228 (321)
T 3lkz_A 213 IEKMELLQRRYGGGLV 228 (321)
T ss_dssp HHHHHHHHHHHCCEEE
T ss_pred HHHHHHHHHHhCCEeE
Confidence 4688888877765554
No 300
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.17 E-value=0.0078 Score=52.73 Aligned_cols=41 Identities=22% Similarity=0.084 Sum_probs=37.0
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHH
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKK 161 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~ 161 (281)
.+++.+||.+||.|--+..+++.+.+|+++|. +++++.+++
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 46789999999999999888887889999999 889999887
No 301
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.02 E-value=0.051 Score=48.74 Aligned_cols=140 Identities=19% Similarity=0.152 Sum_probs=74.9
Q ss_pred eEEEECCCcCHHHHHHHHcCC--E-EEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEE
Q 023543 125 KIVELGSGCGLVGCIAALLGA--Q-VILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVL 200 (281)
Q Consensus 125 ~VLELGcGtG~~~i~~a~~g~--~-V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Ii 200 (281)
+++||-||+|-+++.+...|. + |.++|+ +.+.+..+.|.... .+..-|+.+.....+....+|+++
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~----------~~~~~DI~~~~~~~~~~~~~D~l~ 74 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPET----------NLLNRNIQQLTPQVIKKWNVDTIL 74 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTS----------CEECCCGGGCCHHHHHHTTCCEEE
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCC----------ceeccccccCCHHHhccCCCCEEE
Confidence 799999999988888888885 5 789999 77787777775321 112222222111112223689998
Q ss_pred EccccCCC--------------CcHHHHHHHHHHhhCCCcEEEEEEeeeC---hhHHHHHHHHHhc-CCeEEEEecCCCC
Q 023543 201 GSDVIYSE--------------GAVGDLLDTLLQLCGTQTTIFLAGELRN---DSVLEYFLEAAMK-DFVIGRVEQTQWH 262 (281)
Q Consensus 201 a~d~iy~~--------------~~~~~ll~~l~~ll~~~g~~~l~~~~r~---~~~~~~fl~~~~~-~f~v~~i~~~~~~ 262 (281)
++-..-.. ..+..+++.+..+-+| .+++...... ...++.+++.+.+ |+.+...--...+
T Consensus 75 ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~gl~~~~~~~~i~~~l~~~GY~v~~~vl~a~~ 152 (333)
T 4h0n_A 75 MSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKGFENSTVRNLFIDKLKECNFIYQEFLLCPST 152 (333)
T ss_dssp ECCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTTGGGSHHHHHHHHHHHHTTEEEEEEEECTTT
T ss_pred ecCCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchhhhhhhHHHHHHHHHHhCCCeEEEEEecHHH
Confidence 85543221 1233344333322124 3444443332 3456677777764 7776544222111
Q ss_pred CCCCCCcEEEEEEE
Q 023543 263 PDYCSPRVVVYILV 276 (281)
Q Consensus 263 ~~~~~~~~~i~~~~ 276 (281)
=+..+.|-++|.+-
T Consensus 153 ~GvPQ~R~R~fiva 166 (333)
T 4h0n_A 153 VGVPNSRLRYYCTA 166 (333)
T ss_dssp TTCSCCCCEEEEEE
T ss_pred cCCCccceEEEEEE
Confidence 12234455555543
No 302
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.86 E-value=0.013 Score=53.53 Aligned_cols=72 Identities=14% Similarity=0.080 Sum_probs=48.9
Q ss_pred CeEEEECCCcCHHHHHHHHcCCE-EEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCc-----CCCCC
Q 023543 124 KKIVELGSGCGLVGCIAALLGAQ-VILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL-----IQPLP 196 (281)
Q Consensus 124 ~~VLELGcGtG~~~i~~a~~g~~-V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~-----~~~~f 196 (281)
.+||||-||+|-+++.+...|.+ |.++|+ +.+++..+.|... ..+...|..+.....+ ..+.+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~----------~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPR----------SLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTT----------SEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCC----------CceEecChhhcCHHHHHhhcccCCCe
Confidence 47999999999999999999998 679999 7888888877431 2223323222111111 24679
Q ss_pred cEEEEcccc
Q 023543 197 DYVLGSDVI 205 (281)
Q Consensus 197 D~Iia~d~i 205 (281)
|+|+++-..
T Consensus 73 D~i~ggpPC 81 (376)
T 3g7u_A 73 DGIIGGPPC 81 (376)
T ss_dssp CEEEECCCC
T ss_pred eEEEecCCC
Confidence 999986653
No 303
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.86 E-value=0.0051 Score=68.75 Aligned_cols=100 Identities=18% Similarity=0.175 Sum_probs=45.2
Q ss_pred CCeEEEECCCcCHHHH-HHHHcC------CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCC
Q 023543 123 GKKIVELGSGCGLVGC-IAALLG------AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQP 194 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i-~~a~~g------~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~ 194 (281)
..+|||+|+|+|.... .+..++ .+++.||+ +...+.+++..... ++... .|.......+...
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~--------di~~~--~~d~~~~~~~~~~ 1310 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL--------HVTQG--QWDPANPAPGSLG 1310 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH--------TEEEE--CCCSSCCCC----
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc--------ccccc--cccccccccCCCC
Confidence 4599999999984422 222222 26999999 55566666554432 12211 1211111111235
Q ss_pred CCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 195 LPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 195 ~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.||+||++.+++........+..++++|+|+|.+++..
T Consensus 1311 ~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1311 KADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp -CCEEEEECC--------------------CCEEEEEE
T ss_pred ceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 69999999999888888889999999999999887754
No 304
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.69 E-value=0.098 Score=46.74 Aligned_cols=143 Identities=10% Similarity=0.060 Sum_probs=78.1
Q ss_pred CCeEEEECCCcCHHHHHHHHcCC--E-E-EEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 123 GKKIVELGSGCGLVGCIAALLGA--Q-V-ILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~~g~--~-V-~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
.-+++||.||+|-+++.+...|. + | .++|+ +.+.+..+.|..... ..-|..+.....+....+|
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~~-----------~~~DI~~~~~~~i~~~~~D 78 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEV-----------QVKNLDSISIKQIESLNCN 78 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCCC-----------BCCCTTTCCHHHHHHTCCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCCc-----------ccCChhhcCHHHhccCCCC
Confidence 34899999999999888888884 5 6 69999 788888888853321 1111111111112223689
Q ss_pred EEEEccccCCC------------CcHHHHHHHHHH-hhCC---CcEEEEEEeee---ChhHHHHHHHHHhc-CCeEEEEe
Q 023543 198 YVLGSDVIYSE------------GAVGDLLDTLLQ-LCGT---QTTIFLAGELR---NDSVLEYFLEAAMK-DFVIGRVE 257 (281)
Q Consensus 198 ~Iia~d~iy~~------------~~~~~ll~~l~~-ll~~---~g~~~l~~~~r---~~~~~~~fl~~~~~-~f~v~~i~ 257 (281)
+++++-..-.. +.-..|+..+.+ +++. ...+++..... ....++.+++.+.+ |+.+...-
T Consensus 79 il~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~~~~~~i~~~l~~~GY~v~~~v 158 (327)
T 3qv2_A 79 TWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKESLVFKEIYNILIKNQYYIKDII 158 (327)
T ss_dssp EEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcChHHHHHHHHHHHhCCCEEEEEE
Confidence 99985553221 122245555555 5532 23344443332 23456677777764 77765442
Q ss_pred cCCCCCCCCCCcEEEEEEE
Q 023543 258 QTQWHPDYCSPRVVVYILV 276 (281)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~~ 276 (281)
-...+=+..+.|-++|.+-
T Consensus 159 l~a~~yGvPQ~R~R~fivg 177 (327)
T 3qv2_A 159 CSPIDIGIPNSRTRYYVMA 177 (327)
T ss_dssp ECGGGGTCSBCCCEEEEEE
T ss_pred EeHHHcCCCccceEEEEEE
Confidence 2211112233455555543
No 305
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=95.68 E-value=0.15 Score=46.41 Aligned_cols=120 Identities=17% Similarity=0.161 Sum_probs=74.9
Q ss_pred CceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEechhHHHHHHHHHHHhhcCCCCCCc
Q 023543 96 GSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDLPDRLRLLKKNIENNLRHGDLRGS 175 (281)
Q Consensus 96 G~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~ 175 (281)
..+-|+++- +||.+++... ..+++||-+|.+.|.+++.++..+. ...+|---....++.|+..|++.. ..
T Consensus 18 ~l~a~da~d---~~ll~~~~~~---~~~~~~~~~~d~~gal~~~~~~~~~-~~~~ds~~~~~~~~~n~~~~~~~~---~~ 87 (375)
T 4dcm_A 18 PLQAWEAAD---EYLLQQLDDT---EIRGPVLILNDAFGALSCALAEHKP-YSIGDSYISELATRENLRLNGIDE---SS 87 (375)
T ss_dssp SCCSCCHHH---HHHHHTTTTC---CCCSCEEEECCSSSHHHHHTGGGCC-EEEESCHHHHHHHHHHHHHTTCCG---GG
T ss_pred CCCccchHH---HHHHHhhhhc---cCCCCEEEECCCCCHHHHhhccCCc-eEEEhHHHHHHHHHHHHHHcCCCc---cc
Confidence 355699886 5555543211 2457899999999998888876544 333564334567889999998761 23
Q ss_pred eEEEEEecCCCCCCCcCCCCCcEEEEccccCCCCcHH---HHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 176 AVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSEGAVG---DLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 176 i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~~~~---~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
+.+. +..+. ....||+|+. +.+.... ..+..+...+++++.+++....+.
T Consensus 88 ~~~~--~~~~~-----~~~~~~~v~~----~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~ 140 (375)
T 4dcm_A 88 VKFL--DSTAD-----YPQQPGVVLI----KVPKTLALLEQQLRALRKVVTSDTRIIAGAKARD 140 (375)
T ss_dssp SEEE--ETTSC-----CCSSCSEEEE----ECCSCHHHHHHHHHHHHTTCCTTSEEEEEEEGGG
T ss_pred eEec--ccccc-----cccCCCEEEE----EcCCCHHHHHHHHHHHHhhCCCCCEEEEEecccc
Confidence 4433 22111 2356898774 4445444 445555556689999988877654
No 306
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.60 E-value=0.028 Score=51.84 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=39.4
Q ss_pred cCCCeEEEECCCcCHHHHHHH-HcC---CEEEEEec-hhHHHHHHHHHHH
Q 023543 121 LHGKKIVELGSGCGLVGCIAA-LLG---AQVILTDL-PDRLRLLKKNIEN 165 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a-~~g---~~V~~tD~-~~~l~~~~~N~~~ 165 (281)
.++..|+|+||+.|..++.++ +.+ .+|++.+. +...+.+++|+..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 367899999999999999877 433 58999999 8999999999998
No 307
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.56 E-value=0.014 Score=52.17 Aligned_cols=47 Identities=15% Similarity=0.153 Sum_probs=41.4
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhh
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNL 167 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~ 167 (281)
.+|..|||--||+|..++++.++|.+.+++|+ +..++.+++++...+
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 47889999999999999999999999999999 778888888766543
No 308
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.46 E-value=0.03 Score=50.14 Aligned_cols=44 Identities=20% Similarity=0.237 Sum_probs=38.3
Q ss_pred cCCCeEEEECCCcCHHHHHHHHcCCE-EEEEec-hhHHHHHHHHHH
Q 023543 121 LHGKKIVELGSGCGLVGCIAALLGAQ-VILTDL-PDRLRLLKKNIE 164 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~g~~-V~~tD~-~~~l~~~~~N~~ 164 (281)
..+.+||||.||+|-+++.+...|.+ |.++|+ +.+++..+.|..
T Consensus 9 ~~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~ 54 (327)
T 2c7p_A 9 LTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFG 54 (327)
T ss_dssp TTTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHS
T ss_pred cCCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC
Confidence 45679999999999999999999997 889999 788888888863
No 309
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.44 E-value=0.49 Score=41.67 Aligned_cols=136 Identities=14% Similarity=0.186 Sum_probs=74.3
Q ss_pred eEEEECCCcCHHHHHHHHcCCE-EEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEEEc
Q 023543 125 KIVELGSGCGLVGCIAALLGAQ-VILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVLGS 202 (281)
Q Consensus 125 ~VLELGcGtG~~~i~~a~~g~~-V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Iia~ 202 (281)
+||||-||+|-+++.+.+.|.+ |.++|+ +.+.+..+.|... .+..-|..+.....+ +.+|+++++
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~-----------~~~~~DI~~i~~~~~--~~~D~l~gg 68 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSA-----------KLIKGDISKISSDEF--PKCDGIIGG 68 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCS-----------EEEESCGGGCCGGGS--CCCSEEECC
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCC-----------CcccCChhhCCHhhC--CcccEEEec
Confidence 7999999999888888888998 789999 7788887777321 122222222111112 568999885
Q ss_pred cccCC----------CCcHHHHHHHHHHh---hCCCcEEEEEEee------eChhHHHHHHHHHhc-CCeEEEEecCCCC
Q 023543 203 DVIYS----------EGAVGDLLDTLLQL---CGTQTTIFLAGEL------RNDSVLEYFLEAAMK-DFVIGRVEQTQWH 262 (281)
Q Consensus 203 d~iy~----------~~~~~~ll~~l~~l---l~~~g~~~l~~~~------r~~~~~~~fl~~~~~-~f~v~~i~~~~~~ 262 (281)
-..-. .+.-..|+..+.++ ++|.- ++.... +....++.+++.+.. |+.+...--...+
T Consensus 69 pPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk~--~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vlna~~ 146 (331)
T 3ubt_Y 69 PPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPIF--FLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHIILLNAND 146 (331)
T ss_dssp CCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCSE--EEEEECCGGGGCTTSHHHHHHHHHHHHHTEEEEEEEEEGGG
T ss_pred CCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCeE--EEeeeecccccccccchhhhhhhhhccCCcEEEEEeccccc
Confidence 44321 11112333333332 46642 233222 234566777777764 7765443211111
Q ss_pred CCCCCCcEEEEEE
Q 023543 263 PDYCSPRVVVYIL 275 (281)
Q Consensus 263 ~~~~~~~~~i~~~ 275 (281)
=+..+.|-++|.+
T Consensus 147 yGvPQ~R~Rvfiv 159 (331)
T 3ubt_Y 147 YGVAQDRKRVFYI 159 (331)
T ss_dssp TTCSBCCEEEEEE
T ss_pred CCCCcccceEEEE
Confidence 1223445565554
No 310
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.38 E-value=0.028 Score=50.07 Aligned_cols=60 Identities=18% Similarity=0.233 Sum_probs=45.9
Q ss_pred HHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHHcCCEEEEEec-h---hHHHHHHHHHHHhh
Q 023543 103 GVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-P---DRLRLLKKNIENNL 167 (281)
Q Consensus 103 s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~~g~~V~~tD~-~---~~l~~~~~N~~~n~ 167 (281)
...|.+++.... ..+|..|||--||+|..++++.++|.+.+++|+ + +.++.+++++...+
T Consensus 228 p~~l~~~~i~~~-----~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 228 PAAVIERLVRAL-----SHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CHHHHHHHHHHH-----SCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CHHHHHHHHHHh-----CCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 345556655431 247889999999999999999999999999999 7 77888888876654
No 311
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.24 E-value=0.12 Score=46.18 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=70.9
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEechhHHHHHHHHHHHhhcC----------CC------CCCceEEEEEec
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRH----------GD------LRGSAVVTELTW 183 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~~~~l~~~~~N~~~n~~~----------~~------~~~~i~~~~l~w 183 (281)
..+.|+.||||......-+... +..++=+|.|++++.=++-+..++.. .. ...+......|.
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 3579999999999877777653 45788889888877666666554210 00 014566666665
Q ss_pred CCCC------CCCcCCCCCcEEEEccccCC--CCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 184 GDDP------DQDLIQPLPDYVLGSDVIYS--EGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 184 ~~~~------~~~~~~~~fD~Iia~d~iy~--~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
.+.. ..........++++-.++++ ++....+++.+.... |+|.+++....
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 4310 11111134577787666655 567889999999987 66666544443
No 312
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.00 E-value=0.067 Score=48.19 Aligned_cols=94 Identities=22% Similarity=0.275 Sum_probs=59.7
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-CC---Cc
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-DQ---DL 191 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~~---~~ 191 (281)
..+|.+||-+|||. |..++.+|+ .|+ +|+++|. ++.++.+++ .+.. ..++..+.. .. ..
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---------~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----LGAT---------HVINSKTQDPVAAIKEI 254 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----HTCS---------EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCC---------EEecCCccCHHHHHHHh
Confidence 35688999999875 666666665 688 7999998 667777653 2322 112221110 00 11
Q ss_pred CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.+.++|+|+-+--. ...++...++++++|++++..
T Consensus 255 ~~gg~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 255 TDGGVNFALESTGS------PEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp TTSCEEEEEECSCC------HHHHHHHHHTEEEEEEEEECC
T ss_pred cCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEeC
Confidence 22378988855332 466778888999999887654
No 313
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.97 E-value=0.11 Score=46.39 Aligned_cols=94 Identities=27% Similarity=0.392 Sum_probs=58.7
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc---
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL--- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~--- 191 (281)
..+|.+||-+|+|. |..++.+|+ .|++|+++|. ++.++.+++ .+.. . .++..+..+. .+
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~-------~--~~~~~~~~~~~~~i~~~ 232 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGAD-------V--TLVVDPAKEEESSIIER 232 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS-------E--EEECCTTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCCC-------E--EEcCcccccHHHHHHHH
Confidence 35788999999864 555555555 7899999998 666776652 2322 1 1222210110 01
Q ss_pred C----CCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 I----QPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ~----~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
. ..++|+|+-+--. ...++...++++++|++++..
T Consensus 233 ~~~~~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 233 IRSAIGDLPNVTIDCSGN------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHHSSSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECS
T ss_pred hccccCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 1 2579988865332 456777788999999987654
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.85 E-value=0.06 Score=48.29 Aligned_cols=94 Identities=24% Similarity=0.342 Sum_probs=58.6
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCC--CCC---C-
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD--DPD---Q- 189 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~--~~~---~- 189 (281)
..+|.+||-+|||. |..++.+|+ .|+ +|+++|. ++.++.+++ .+.. .+ ++... ..+ .
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~-------~v--i~~~~~~~~~~~~~i 235 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD-------LV--LQISKESPQEIARKV 235 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS-------EE--EECSSCCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC-------EE--EcCcccccchHHHHH
Confidence 35788999999875 666666665 788 8999998 666776653 2322 11 22110 000 0
Q ss_pred -CcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 190 -DLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 190 -~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
...+.++|+|+-+--. ...++...++++++|++++..
T Consensus 236 ~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 236 EGQLGCKPEVTIECTGA------EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHHHTSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECS
T ss_pred HHHhCCCCCEEEECCCC------hHHHHHHHHHhcCCCEEEEEe
Confidence 0112568988865332 456777788999999987654
No 315
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.73 E-value=0.053 Score=48.20 Aligned_cols=94 Identities=22% Similarity=0.174 Sum_probs=60.0
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-CCc--CC
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-QDL--IQ 193 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-~~~--~~ 193 (281)
..+|.+||=.|||. |..++.+|+ .|++|+++|. ++.++.+++ .+.. ..++..+... ..+ ..
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---------~~i~~~~~~~~~~~~~~~ 230 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR----LGAE---------VAVNARDTDPAAWLQKEI 230 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS---------EEEETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCCC---------EEEeCCCcCHHHHHHHhC
Confidence 35788999999975 777776665 7899999999 666776653 3322 1223221100 000 11
Q ss_pred CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 194 PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
..+|+|+-+-.- ...++...++++++|++++..
T Consensus 231 g~~d~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 231 GGAHGVLVTAVS------PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp SSEEEEEESSCC------HHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCEEEEeCCC------HHHHHHHHHHhccCCEEEEeC
Confidence 367888755332 567788888999999887653
No 316
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.72 E-value=0.093 Score=47.37 Aligned_cols=94 Identities=21% Similarity=0.286 Sum_probs=59.5
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC--C--CC-
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP--D--QD- 190 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~--~--~~- 190 (281)
..+|.+||=+|+|. |..++.+|+ .|+ +|+++|. ++.++++++ .+.. ..++..+.. + ..
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---------~vi~~~~~~~~~~i~~~ 246 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----VGAT---------ATVDPSAGDVVEAIAGP 246 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCS---------EEECTTSSCHHHHHHST
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCC---------EEECCCCcCHHHHHHhh
Confidence 35788999999864 666665665 688 8999999 666776654 3332 112211110 0 00
Q ss_pred --cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 --LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 --~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
+.+..+|+|+-+--. ...++...++++++|++++..
T Consensus 247 ~~~~~gg~Dvvid~~G~------~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 247 VGLVPGGVDVVIECAGV------AETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp TSSSTTCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECS
T ss_pred hhccCCCCCEEEECCCC------HHHHHHHHHHhccCCEEEEEe
Confidence 233478988864322 557788888999999987764
No 317
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.54 E-value=0.033 Score=50.08 Aligned_cols=98 Identities=17% Similarity=0.243 Sum_probs=60.3
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCCE-EEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEe------cCCCCCC
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQ-VILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELT------WGDDPDQ 189 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~~-V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~------w~~~~~~ 189 (281)
..+|.+||=+|+|. |..++.+|+ .|++ |+++|. ++.++.+++. ... .+. ...+ |.+....
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~--------~~~-~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE--------VVT-HKVERLSAEESAKKIVE 246 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT--------CEE-EECCSCCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh--------ccc-ccccccchHHHHHHHHH
Confidence 35788999999865 666666665 6887 999998 7778877754 111 111 1111 1000000
Q ss_pred CcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 190 DLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 190 ~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
......+|+|+-+--- +..++...++++++|++++...
T Consensus 247 ~t~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 247 SFGGIEPAVALECTGV------ESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp HTSSCCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECCC
T ss_pred HhCCCCCCEEEECCCC------hHHHHHHHHHhcCCCEEEEEcc
Confidence 0113579988865332 4567788889999999877643
No 318
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=94.53 E-value=0.058 Score=48.76 Aligned_cols=42 Identities=19% Similarity=0.232 Sum_probs=35.6
Q ss_pred CCCeEEEECCCcCHHHHHHHHc--CCEEEEEec-hhHHHHHHHHH
Q 023543 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNI 163 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~ 163 (281)
++..|||+|.|.|.++..++.. +.+|+++++ +..+..++...
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~ 102 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF 102 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc
Confidence 4689999999999999988875 568999999 77788887765
No 319
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.42 E-value=0.25 Score=44.40 Aligned_cols=94 Identities=16% Similarity=0.102 Sum_probs=58.9
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCC-CC--C---
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD-PD--Q--- 189 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~-~~--~--- 189 (281)
..+|.+||=+|+|. |..++.+|+ .|+ +|+++|. ++.++.+++ .+.. ..++..+. .+ .
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---------~vi~~~~~~~~~~~~i~ 255 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGAT---------ECLNPKDYDKPIYEVIC 255 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCS---------EEECGGGCSSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCc---------EEEecccccchHHHHHH
Confidence 35688999999874 666666665 688 8999998 667777653 2322 11222210 00 0
Q ss_pred CcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCC-cEEEEEE
Q 023543 190 DLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQ-TTIFLAG 232 (281)
Q Consensus 190 ~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~-g~~~l~~ 232 (281)
...+..+|+|+-+--. ...++...++++++ |++++..
T Consensus 256 ~~t~gg~Dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 256 EKTNGGVDYAVECAGR------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HHhCCCCCEEEECCCC------HHHHHHHHHHHhcCCCEEEEEc
Confidence 1123478988854322 45677888899999 9877654
No 320
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=94.41 E-value=0.072 Score=45.42 Aligned_cols=145 Identities=13% Similarity=-0.038 Sum_probs=78.5
Q ss_pred CcCceecchHHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCC
Q 023543 94 VTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHG 170 (281)
Q Consensus 94 ~tG~~~W~~s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~ 170 (281)
++|...=.++..|.+-..+. ...++.+||||||++|-.+-.++. .|+ +|+++|+ ..--+.= ..++..+.
T Consensus 55 ~~g~yrSRa~~KL~ei~ek~-----~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gw-- 126 (267)
T 3p8z_A 55 TTHHAVSRGSAKLQWFVERN-----MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGW-- 126 (267)
T ss_dssp CSSCCSSTHHHHHHHHHHTT-----SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTT--
T ss_pred cCCCccchHHHHHHHHHHhc-----CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCc--
Confidence 34555556677777666543 245778999999999999987665 566 4999999 3221000 00001111
Q ss_pred CCCCceEEEEE-ecCCCCCCCcCCCCCcEEEEccccCCCCc----H---HHHHHHHHHhhCCCcEEEEEEeeeChhHHHH
Q 023543 171 DLRGSAVVTEL-TWGDDPDQDLIQPLPDYVLGSDVIYSEGA----V---GDLLDTLLQLCGTQTTIFLAGELRNDSVLEY 242 (281)
Q Consensus 171 ~~~~~i~~~~l-~w~~~~~~~~~~~~fD~Iia~d~iy~~~~----~---~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~ 242 (281)
+.+.+... |. ..+...++|.|+| |+--.... . -.+++.+.+.|++ +.+++-.-.-+...+..
T Consensus 127 ---n~v~fk~gvDv-----~~~~~~~~Dtllc-DIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e 196 (267)
T 3p8z_A 127 ---NIVKLMSGKDV-----FYLPPEKCDTLLC-DIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIE 196 (267)
T ss_dssp ---TSEEEECSCCG-----GGCCCCCCSEEEE-CCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHH
T ss_pred ---CceEEEeccce-----eecCCccccEEEE-ecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHH
Confidence 23444442 21 1233467998875 33322211 1 1155555677888 55443211122222345
Q ss_pred HHHHHhcCCeEEEE
Q 023543 243 FLEAAMKDFVIGRV 256 (281)
Q Consensus 243 fl~~~~~~f~v~~i 256 (281)
+++.++..|.-..+
T Consensus 197 ~l~~lq~~fgg~lV 210 (267)
T 3p8z_A 197 HLERLQRKHGGMLV 210 (267)
T ss_dssp HHHHHHHHHCCEEE
T ss_pred HHHHHHHHhCCEeE
Confidence 88888876665444
No 321
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.25 E-value=0.087 Score=47.46 Aligned_cols=91 Identities=19% Similarity=0.200 Sum_probs=58.9
Q ss_pred CCCeEEEEC-CCc-CHHHHHHHHc--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC---CcCC
Q 023543 122 HGKKIVELG-SGC-GLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ---DLIQ 193 (281)
Q Consensus 122 ~~~~VLELG-cGt-G~~~i~~a~~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~---~~~~ 193 (281)
+|.+||=.| +|. |..++.+|+. |++|+++|. ++.++.+++ .+.. ..++..+.... ....
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad---------~vi~~~~~~~~~v~~~~~ 237 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH---------HVIDHSKPLAAEVAALGL 237 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS---------EEECTTSCHHHHHHTTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC---------EEEeCCCCHHHHHHHhcC
Confidence 578999999 664 7777777773 789999999 666777653 3322 11222211100 1123
Q ss_pred CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 023543 194 PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
..+|+|+-+-- -...++.+.++++++|++++.
T Consensus 238 ~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 238 GAPAFVFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp CCEEEEEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred CCceEEEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 57888776433 256778888999999998765
No 322
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.22 E-value=0.036 Score=50.19 Aligned_cols=93 Identities=22% Similarity=0.204 Sum_probs=55.0
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-CCCcCCCC
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-DQDLIQPL 195 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~~~~~~~~ 195 (281)
..+|.+||-+|+|. |..++.+|+ .|++|+++|. ++.++.+++ .+.. ..++..+.. ...+. .+
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa~---------~vi~~~~~~~~~~~~-~g 257 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGAD---------EVVNSRNADEMAAHL-KS 257 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCS---------EEEETTCHHHHHTTT-TC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCc---------EEeccccHHHHHHhh-cC
Confidence 35688999999874 666665565 7899999998 677777663 2322 112211100 00111 46
Q ss_pred CcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 196 PDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 196 fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
+|+|+-+-- ... .++...++++++|++++..
T Consensus 258 ~Dvvid~~g--~~~----~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 258 FDFILNTVA--APH----NLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEEEEECCS--SCC----CHHHHHTTEEEEEEEEECC
T ss_pred CCEEEECCC--CHH----HHHHHHHHhccCCEEEEec
Confidence 898875432 222 3445566788888876543
No 323
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.15 E-value=0.32 Score=43.63 Aligned_cols=94 Identities=19% Similarity=0.205 Sum_probs=58.7
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCC-CC--C---
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD-PD--Q--- 189 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~-~~--~--- 189 (281)
..+|.+||=+|+|. |..++.+|+ .|+ +|+++|. ++.++.+++ .+.. ..++..+. .+ .
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---------~vi~~~~~~~~~~~~v~ 254 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE----FGAT---------ECINPQDFSKPIQEVLI 254 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----HTCS---------EEECGGGCSSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---------eEeccccccccHHHHHH
Confidence 35688999999864 555555555 688 8999998 677777653 2322 11222210 00 0
Q ss_pred CcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCC-cEEEEEE
Q 023543 190 DLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQ-TTIFLAG 232 (281)
Q Consensus 190 ~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~-g~~~l~~ 232 (281)
...+..+|+|+-+--. ...++...++++++ |++++..
T Consensus 255 ~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 255 EMTDGGVDYSFECIGN------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HHhCCCCCEEEECCCc------HHHHHHHHHhhccCCcEEEEEe
Confidence 1122478988855332 45677888899999 9877654
No 324
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.15 E-value=0.27 Score=44.17 Aligned_cols=94 Identities=22% Similarity=0.273 Sum_probs=58.7
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCC-CC--C---
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD-PD--Q--- 189 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~-~~--~--- 189 (281)
..+|.+||-+|+|. |..++.+|+ .|+ +|+++|. ++.++.+++ .+.. ..++..+. .+ .
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---------~vi~~~~~~~~~~~~~~ 256 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT---------DFVNPNDHSEPISQVLS 256 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC---------EEECGGGCSSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCc---------eEEeccccchhHHHHHH
Confidence 35688999999864 666666665 688 8999998 677777653 2322 11222210 00 0
Q ss_pred CcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCC-cEEEEEE
Q 023543 190 DLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQ-TTIFLAG 232 (281)
Q Consensus 190 ~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~-g~~~l~~ 232 (281)
...+..+|+|+-+--. ...++...++++++ |++++..
T Consensus 257 ~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 257 KMTNGGVDFSLECVGN------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp HHHTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HHhCCCCCEEEECCCC------HHHHHHHHHHhhcCCcEEEEEc
Confidence 1122478988854332 45678888899999 9877653
No 325
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.01 E-value=0.38 Score=43.24 Aligned_cols=94 Identities=19% Similarity=0.200 Sum_probs=58.3
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCC-CC--C---
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD-PD--Q--- 189 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~-~~--~--- 189 (281)
..+|.+||=+|+|. |...+.+|+ .|+ +|+++|. ++.++.+++ .+.. ..++..+. .+ .
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---------~vi~~~~~~~~~~~~~~ 255 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGAT---------ECVNPQDYKKPIQEVLT 255 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---------EEECGGGCSSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---------eEecccccchhHHHHHH
Confidence 35688999999864 555555555 688 8999998 677776653 2322 11222210 00 0
Q ss_pred CcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCC-cEEEEEE
Q 023543 190 DLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQ-TTIFLAG 232 (281)
Q Consensus 190 ~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~-g~~~l~~ 232 (281)
...+..+|+|+-+--. ...++...++++++ |++++..
T Consensus 256 ~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 256 EMSNGGVDFSFEVIGR------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HHTTSCBSEEEECSCC------HHHHHHHHHHBCTTTCEEEECS
T ss_pred HHhCCCCcEEEECCCC------HHHHHHHHHHhhcCCcEEEEec
Confidence 1123478988855332 45677788899999 9877653
No 326
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.98 E-value=0.24 Score=44.67 Aligned_cols=94 Identities=23% Similarity=0.246 Sum_probs=59.0
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCC-CCCC-----
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD-DPDQ----- 189 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~-~~~~----- 189 (281)
..+|.+||=+|+|. |+.++.+|+ .|+ +|+++|. ++.++.+++ .+.. ..++..+ ..+.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---------~vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN---------EFVNPKDHDKPIQEVIV 257 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC---------EEECGGGCSSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---------EEEccccCchhHHHHHH
Confidence 35688999999874 666666665 688 7999998 777776652 2322 1222211 0010
Q ss_pred CcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCC-cEEEEEE
Q 023543 190 DLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQ-TTIFLAG 232 (281)
Q Consensus 190 ~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~-g~~~l~~ 232 (281)
.+.+..+|+|+-+--- ...++...++++++ |++++..
T Consensus 258 ~~~~gg~D~vid~~g~------~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 258 DLTDGGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp HHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhcCCCCCEEEECCCC------HHHHHHHHHHhhccCCEEEEEc
Confidence 1223479988865332 56778888899996 8877654
No 327
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.91 E-value=0.32 Score=43.70 Aligned_cols=94 Identities=20% Similarity=0.236 Sum_probs=58.2
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCC-CC--C---
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD-PD--Q--- 189 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~-~~--~--- 189 (281)
..+|.+||=+|+|. |..++.+|+ .|+ +|+++|. ++.++.+++ .+.. ..++..+. .+ .
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---------~vi~~~~~~~~~~~~v~ 259 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT---------DCLNPRELDKPVQDVIT 259 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---------EEECGGGCSSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---------EEEccccccchHHHHHH
Confidence 35688999999864 666666665 688 8999998 666776653 2322 11222210 00 0
Q ss_pred CcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCC-cEEEEEE
Q 023543 190 DLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQ-TTIFLAG 232 (281)
Q Consensus 190 ~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~-g~~~l~~ 232 (281)
...+..+|+|+-+--- ...++...++++++ |++++..
T Consensus 260 ~~~~~g~Dvvid~~G~------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 260 ELTAGGVDYSLDCAGT------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HHHTSCBSEEEESSCC------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HHhCCCccEEEECCCC------HHHHHHHHHHhhcCCCEEEEEC
Confidence 0122478988854332 45677888899999 9877643
No 328
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.82 E-value=0.05 Score=48.51 Aligned_cols=92 Identities=11% Similarity=-0.014 Sum_probs=57.3
Q ss_pred CCCeEEEECCCc-CHHHHHHHH-c--CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCC-C-CCCCcC-C
Q 023543 122 HGKKIVELGSGC-GLVGCIAAL-L--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD-D-PDQDLI-Q 193 (281)
Q Consensus 122 ~~~~VLELGcGt-G~~~i~~a~-~--g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~-~-~~~~~~-~ 193 (281)
+|.+||-+|+|. |..++.+|+ . |++|+++|. ++.++.+++ .+.. . .++..+ . ....+. .
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~-----~----vi~~~~~~~~~~~~~~g 236 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGAD-----Y----VSEMKDAESLINKLTDG 236 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCS-----E----EECHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCC-----E----EeccccchHHHHHhhcC
Confidence 789999999964 566665665 6 899999998 666776653 2322 1 111111 0 000112 2
Q ss_pred CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 194 PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.++|+|+-+--. +..++...++++++|++++..
T Consensus 237 ~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 237 LGASIAIDLVGT------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp CCEEEEEESSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCccEEEECCCC------hHHHHHHHHHhhcCCEEEEeC
Confidence 378988865432 446777788899999876653
No 329
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.65 E-value=0.09 Score=46.91 Aligned_cols=89 Identities=18% Similarity=0.163 Sum_probs=55.4
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
..+|.+||=+|+|. |..++.+|+ .|++|+++|. ++.++.+++ .+.. .+ . .+. ..+ ...+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~-----~v--~----~~~--~~~-~~~~ 235 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGVK-----HF--Y----TDP--KQC-KEEL 235 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTCS-----EE--E----SSG--GGC-CSCE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCCC-----ee--c----CCH--HHH-hcCC
Confidence 45789999999875 666666665 7899999998 666776653 3322 11 1 111 111 2278
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
|+|+-+-- ... .++...++++++|++++..
T Consensus 236 D~vid~~g--~~~----~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 236 DFIISTIP--THY----DLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEEEECCC--SCC----CHHHHHTTEEEEEEEEECC
T ss_pred CEEEECCC--cHH----HHHHHHHHHhcCCEEEEEC
Confidence 98875322 222 3555667888999877664
No 330
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.62 E-value=0.011 Score=53.14 Aligned_cols=93 Identities=13% Similarity=0.093 Sum_probs=56.5
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-CC---Cc
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-DQ---DL 191 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~~---~~ 191 (281)
..+|.+||=+|+|. |..++.+|+ .|+ +|+++|. ++.++.+++ .+.. ..++..+.. .. ..
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---------~vi~~~~~~~~~~v~~~ 230 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE----YGAT---------DIINYKNGDIVEQILKA 230 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH----HTCC---------EEECGGGSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCc---------eEEcCCCcCHHHHHHHH
Confidence 35788999999875 666666666 688 7999999 666777654 2322 112211110 00 01
Q ss_pred -CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 023543 192 -IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 192 -~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
....+|+|+-+-- . +..++...++++++|++++.
T Consensus 231 t~g~g~D~v~d~~g--~----~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 231 TDGKGVDKVVIAGG--D----VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp TTTCCEEEEEECSS--C----TTHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCCCEEEECCC--C----hHHHHHHHHHHhcCCEEEEe
Confidence 1246898885322 2 34667777888999987654
No 331
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=93.48 E-value=0.3 Score=43.17 Aligned_cols=110 Identities=14% Similarity=0.071 Sum_probs=69.9
Q ss_pred CeEEEECCCcCHHHHHHHH-cCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC-----cCCCCCc
Q 023543 124 KKIVELGSGCGLVGCIAAL-LGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-----LIQPLPD 197 (281)
Q Consensus 124 ~~VLELGcGtG~~~i~~a~-~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~-----~~~~~fD 197 (281)
+.||+||||.=.-+.-+.. .+.+|+=+|.|+++..-++-+..++.. ...+..+...|..+..... +.....=
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~--~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVT--PTADRREVPIDLRQDWPPALRSAGFDPSART 181 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCC--CSSEEEEEECCTTSCHHHHHHHTTCCTTSCE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCC--CCCCeEEEecchHhhHHHHHHhccCCCCCCE
Confidence 5799999996544333332 245799999999988888887765432 1245666666654310001 1112234
Q ss_pred EEEEccccCC--CCcHHHHHHHHHHhhCCCcEEEEEEeee
Q 023543 198 YVLGSDVIYS--EGAVGDLLDTLLQLCGTQTTIFLAGELR 235 (281)
Q Consensus 198 ~Iia~d~iy~--~~~~~~ll~~l~~ll~~~g~~~l~~~~r 235 (281)
++++-.++++ ++....+++.+..++.+|+.+++.....
T Consensus 182 ~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 182 AWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred EEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 6666666554 4567889999999888998887776543
No 332
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.03 E-value=0.02 Score=51.12 Aligned_cols=93 Identities=13% Similarity=-0.013 Sum_probs=55.9
Q ss_pred ccCCCeEEEECCCc--CHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-CC---Cc
Q 023543 120 LLHGKKIVELGSGC--GLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-DQ---DL 191 (281)
Q Consensus 120 ~~~~~~VLELGcGt--G~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~~---~~ 191 (281)
..+|++||=.|||+ |...+.+++ .|++|+++|. ++.++.+++ .+.. ..++..+.. .. ..
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lga~---------~~~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----LGAA---------YVIDTSTAPLYETVMEL 208 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCS---------EEEETTTSCHHHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----CCCc---------EEEeCCcccHHHHHHHH
Confidence 45789999999974 555555554 7999999998 666777764 2322 112221110 00 01
Q ss_pred -CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 -IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 -~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
....+|+|+-+--- ..+...+ ++++++|++++..
T Consensus 209 ~~~~g~Dvvid~~g~------~~~~~~~-~~l~~~G~iv~~G 243 (340)
T 3gms_A 209 TNGIGADAAIDSIGG------PDGNELA-FSLRPNGHFLTIG 243 (340)
T ss_dssp TTTSCEEEEEESSCH------HHHHHHH-HTEEEEEEEEECC
T ss_pred hCCCCCcEEEECCCC------hhHHHHH-HHhcCCCEEEEEe
Confidence 12478988764332 3344444 7899999987664
No 333
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.99 E-value=0.2 Score=44.66 Aligned_cols=91 Identities=22% Similarity=0.210 Sum_probs=55.8
Q ss_pred CCCeEEEEC-CCc-CHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC---CcCCC
Q 023543 122 HGKKIVELG-SGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ---DLIQP 194 (281)
Q Consensus 122 ~~~~VLELG-cGt-G~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~---~~~~~ 194 (281)
+|.+||=.| +|. |..++.+++ .|++|+++|. ++.++.+++ .+.. ..++..+.... .....
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---------~vi~~~~~~~~~~~~~~~~ 216 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK----MGAD---------IVLNHKESLLNQFKTQGIE 216 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH----HTCS---------EEECTTSCHHHHHHHHTCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCc---------EEEECCccHHHHHHHhCCC
Confidence 688999995 543 555555554 6899999999 777777764 2322 11222111000 11234
Q ss_pred CCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 023543 195 LPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 195 ~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
.+|+|+-+-- -...++.+.++++++|+++..
T Consensus 217 g~Dvv~d~~g------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 217 LVDYVFCTFN------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp CEEEEEESSC------HHHHHHHHHHHEEEEEEEEES
T ss_pred CccEEEECCC------chHHHHHHHHHhccCCEEEEE
Confidence 6898886432 255677888899999987543
No 334
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.84 E-value=0.22 Score=44.23 Aligned_cols=93 Identities=16% Similarity=0.115 Sum_probs=57.0
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-CCC---cC
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-DQD---LI 192 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~~~---~~ 192 (281)
..+|++||-+|+|. |...+.+++ .|++|+++|. ++.++.+++ .+.. ..++..+.. ... ..
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---------~~~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGAD---------LVVNPLKEDAAKFMKEKV 228 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS---------EEECTTTSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCCC---------EEecCCCccHHHHHHHHh
Confidence 35688999999964 555555554 7899999998 666776642 2322 112322110 000 11
Q ss_pred CCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 193 QPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 193 ~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
..+|+|+-+--. ...++...++++++|++++..
T Consensus 229 -~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 229 -GGVHAAVVTAVS------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp -SSEEEEEESSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred -CCCCEEEECCCC------HHHHHHHHHHhhcCCEEEEec
Confidence 468988865432 456777788899999876553
No 335
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.66 E-value=0.21 Score=44.50 Aligned_cols=94 Identities=16% Similarity=0.168 Sum_probs=56.6
Q ss_pred ccCCCeEEEECCC--cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--C---
Q 023543 120 LLHGKKIVELGSG--CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--D--- 190 (281)
Q Consensus 120 ~~~~~~VLELGcG--tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~--- 190 (281)
..+|++||-.|++ .|...+.+++ .|++|+++|. ++.++.+++ .+.. ..++..+..+. .
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~~---------~~~d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGGE---------VFIDFTKEKDIVGAVLK 233 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTCC---------EEEETTTCSCHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCCc---------eEEecCccHhHHHHHHH
Confidence 3578999999983 3554444444 7899999998 666665543 2221 12343321110 0
Q ss_pred cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 ~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
..+..+|+|+.+--. ...++...++++++|++++..
T Consensus 234 ~~~~~~D~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 234 ATDGGAHGVINVSVS------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp HHTSCEEEEEECSSC------HHHHHHHTTSEEEEEEEEECC
T ss_pred HhCCCCCEEEECCCc------HHHHHHHHHHHhcCCEEEEEe
Confidence 111268988865432 456777778889999876553
No 336
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.39 E-value=0.095 Score=47.89 Aligned_cols=98 Identities=19% Similarity=0.183 Sum_probs=55.0
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-CC---Cc
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-DQ---DL 191 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~~---~~ 191 (281)
..+|.+||=+|+|. |..++.+|+ .|+ +|+++|. ++.++++++ .+.. ..++..+.. .. ..
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---------~vi~~~~~~~~~~i~~~ 277 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE----LGAD---------HVIDPTKENFVEAVLDY 277 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCS---------EEECTTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCC---------EEEcCCCCCHHHHHHHH
Confidence 45788999999864 566665565 688 8999998 667777753 2322 112211110 00 01
Q ss_pred -CCCCCcEEEEccccCCC-CcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 -IQPLPDYVLGSDVIYSE-GAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 -~~~~fD~Iia~d~iy~~-~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
....+|+|+-+-- .. .....+++.+.+.++++|++++..
T Consensus 278 t~g~g~D~vid~~g--~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 278 TNGLGAKLFLEATG--VPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp TTTCCCSEEEECSS--CHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred hCCCCCCEEEECCC--CcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 1347998885422 11 122333333334449999987764
No 337
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.20 E-value=0.028 Score=51.07 Aligned_cols=93 Identities=27% Similarity=0.330 Sum_probs=55.8
Q ss_pred cCCCeEEEECCCc-CHHHHHHHH-cC-CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCC--CCC--C---
Q 023543 121 LHGKKIVELGSGC-GLVGCIAAL-LG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD--DPD--Q--- 189 (281)
Q Consensus 121 ~~~~~VLELGcGt-G~~~i~~a~-~g-~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~--~~~--~--- 189 (281)
.+|.+||=+|+|. |..++.+|+ .| ++|+++|. ++.++.+++ .+.. ..++... ..+ .
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---------~vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGAD---------LTLNRRETSVEERRKAIM 260 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCS---------EEEETTTSCHHHHHHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCc---------EEEeccccCcchHHHHHH
Confidence 4688999999764 666666665 68 59999998 666776652 2322 1122210 000 0
Q ss_pred CcC-CCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 190 DLI-QPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 190 ~~~-~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
... ...+|+|+-+--. ...++...++++++|++++..
T Consensus 261 ~~~~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 261 DITHGRGADFILEATGD------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp HHTTTSCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECC
T ss_pred HHhCCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 011 2368988854321 235666778889999877654
No 338
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.16 E-value=0.046 Score=48.75 Aligned_cols=94 Identities=27% Similarity=0.260 Sum_probs=59.2
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-c-CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC---c-
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-L-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD---L- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~-g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~---~- 191 (281)
..+|.+||=+|+|. |..++.+|+ . +++|+++|. ++.++.+++ .+.. .+ ++..+..... .
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~-------~~--i~~~~~~~~~v~~~t 235 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGAD-------AA--VKSGAGAADAIRELT 235 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCS-------EE--EECSTTHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCC-------EE--EcCCCcHHHHHHHHh
Confidence 45788999999875 666666665 4 679999999 666776653 3322 11 2211110000 1
Q ss_pred CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
....+|+|+-+--- +..++...++++++|++++..
T Consensus 236 ~g~g~d~v~d~~G~------~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 236 GGQGATAVFDFVGA------QSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp GGGCEEEEEESSCC------HHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCeEEEECCCC------HHHHHHHHHHHhcCCEEEEEC
Confidence 12378988764332 557788888999999887654
No 339
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.82 E-value=0.036 Score=49.58 Aligned_cols=92 Identities=26% Similarity=0.226 Sum_probs=56.3
Q ss_pred CCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-CC---CcC-
Q 023543 122 HGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-DQ---DLI- 192 (281)
Q Consensus 122 ~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~~---~~~- 192 (281)
+|.+||-+|+|. |...+.+|+ .|+ +|+++|. ++.++.+++ .+.. ..++..+.. .. ...
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~Ga~---------~~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----VGAD---------YVINPFEEDVVKEVMDITD 233 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----HTCS---------EEECTTTSCHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC---------EEECCCCcCHHHHHHHHcC
Confidence 889999999953 555555554 688 8999999 666666653 2222 112221110 00 011
Q ss_pred CCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 193 QPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 193 ~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
...+|+|+-+--. ...++...++++++|++++..
T Consensus 234 g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 234 GNGVDVFLEFSGA------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TSCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEc
Confidence 2368988865432 456777788889999876654
No 340
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.68 E-value=0.028 Score=45.79 Aligned_cols=93 Identities=16% Similarity=0.082 Sum_probs=54.0
Q ss_pred ccCCCeEEEECCCc--CHHHHHHH-HcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-C----C
Q 023543 120 LLHGKKIVELGSGC--GLVGCIAA-LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-Q----D 190 (281)
Q Consensus 120 ~~~~~~VLELGcGt--G~~~i~~a-~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-~----~ 190 (281)
..+|++||-.|++. |...+.++ ..|++|+++|. ++.++.+++ .+.. ..++..+... . .
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~~---------~~~d~~~~~~~~~~~~~ 102 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGVE---------YVGDSRSVDFADEILEL 102 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCCS---------EEEETTCSTHHHHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCC---------EEeeCCcHHHHHHHHHH
Confidence 35789999999533 43333333 36899999999 565555432 2211 1123322110 0 0
Q ss_pred cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 ~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.....+|+++.+-- ...++...++++++|++++..
T Consensus 103 ~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 103 TDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp TTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEECS
T ss_pred hCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEEc
Confidence 11246898886532 245677788899999877654
No 341
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.66 E-value=0.25 Score=43.92 Aligned_cols=94 Identities=17% Similarity=0.186 Sum_probs=56.5
Q ss_pred ccCCCeEEEECCCc--CHHHHHHHH-c-CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC----CC
Q 023543 120 LLHGKKIVELGSGC--GLVGCIAAL-L-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD----QD 190 (281)
Q Consensus 120 ~~~~~~VLELGcGt--G~~~i~~a~-~-g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~----~~ 190 (281)
..++++||-.|+|. |...+.+++ . |++|+++|. ++.++.+++ .+.. ..++..+... ..
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~g~~---------~~~~~~~~~~~~~~~~ 234 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGAD---------YVINASMQDPLAEIRR 234 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTCS---------EEEETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCC---------EEecCCCccHHHHHHH
Confidence 35789999999984 444444443 6 999999998 666666643 2221 1123222110 01
Q ss_pred cCC-CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 LIQ-PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 ~~~-~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
... ..+|+|+.+--- ...++...++++++|++++..
T Consensus 235 ~~~~~~~d~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 235 ITESKGVDAVIDLNNS------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp HTTTSCEEEEEESCCC------HHHHTTGGGGEEEEEEEEECC
T ss_pred HhcCCCceEEEECCCC------HHHHHHHHHHHhcCCEEEEEC
Confidence 122 478988865432 446677778889999877654
No 342
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=91.04 E-value=0.68 Score=40.49 Aligned_cols=88 Identities=18% Similarity=0.143 Sum_probs=54.9
Q ss_pred eEEEECC-C-cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-CCCcCCCCCcEE
Q 023543 125 KIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-DQDLIQPLPDYV 199 (281)
Q Consensus 125 ~VLELGc-G-tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~~~~~~~~fD~I 199 (281)
+||=.|+ | .|..++.+|+ .|++|+++|. ++.++.+++ .+.. .+ ++..+.. ...+.+..+|+|
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~-------~v--i~~~~~~~~~~~~~~~~d~v 215 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS----LGAN-------RI--LSRDEFAESRPLEKQLWAGA 215 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH----HTCS-------EE--EEGGGSSCCCSSCCCCEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCC-------EE--EecCCHHHHHhhcCCCccEE
Confidence 4999997 4 3666666665 7899999998 777777764 2322 11 1211111 112234578877
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
+-+-- .+.++...++++++|++++..
T Consensus 216 ~d~~g-------~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 216 IDTVG-------DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp EESSC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred EECCC-------cHHHHHHHHHHhcCCEEEEEe
Confidence 75321 237778888999999987664
No 343
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=90.56 E-value=0.53 Score=41.63 Aligned_cols=94 Identities=18% Similarity=0.208 Sum_probs=55.7
Q ss_pred ccCCCeEEEECC-C-cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-----C
Q 023543 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-----D 190 (281)
Q Consensus 120 ~~~~~~VLELGc-G-tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-----~ 190 (281)
..+|++||-.|| | .|...+.+++ .|++|+++|. ++.++.+++. .+.. ..++..+..+. .
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~~---------~~~d~~~~~~~~~~~~~ 220 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGFD---------DAFNYKEESDLTAALKR 220 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCCS---------EEEETTSCSCSHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCc---------eEEecCCHHHHHHHHHH
Confidence 357899999997 3 3555554444 7899999998 6666665421 1221 12233221110 0
Q ss_pred cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 ~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.....+|+|+.+-- ...++...++++++|++++..
T Consensus 221 ~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 221 CFPNGIDIYFENVG-------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp HCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECC
T ss_pred HhCCCCcEEEECCC-------HHHHHHHHHHHhcCCEEEEEc
Confidence 11246898876532 136677778889999877653
No 344
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.46 E-value=0.72 Score=41.27 Aligned_cols=93 Identities=20% Similarity=0.230 Sum_probs=57.0
Q ss_pred ccCCCeEEEECC-C-cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-CC---Cc
Q 023543 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-DQ---DL 191 (281)
Q Consensus 120 ~~~~~~VLELGc-G-tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~~---~~ 191 (281)
..+|++||=.|+ | .|...+.+++ .|++|+++|. ++.++.+++ .+.. ..++..+.. .. ..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~---------~~~~~~~~~~~~~~~~~ 227 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCD---------RPINYKTEPVGTVLKQE 227 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---------EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCc---------EEEecCChhHHHHHHHh
Confidence 356889999993 4 3666666555 7899999999 666666653 2322 112222110 00 01
Q ss_pred CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
....+|+|+-+-- ...++.+.++++++|++++..
T Consensus 228 ~~~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 228 YPEGVDVVYESVG-------GAMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp CTTCEEEEEECSC-------THHHHHHHHHEEEEEEEEECC
T ss_pred cCCCCCEEEECCC-------HHHHHHHHHHHhcCCEEEEEe
Confidence 2346898886533 146677778889999877654
No 345
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.04 E-value=0.55 Score=41.17 Aligned_cols=93 Identities=15% Similarity=0.018 Sum_probs=54.4
Q ss_pred ccCCCeEEEEC-CCc-CHHHHHHHH-cCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 120 LLHGKKIVELG-SGC-GLVGCIAAL-LGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 120 ~~~~~~VLELG-cGt-G~~~i~~a~-~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
..+|.+||=+| +|. |..++.+|+ .|++|++++.++.++.+++ .+.. ..++..+.....-.-..+
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~----lGa~---------~~i~~~~~~~~~~~~~g~ 216 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKA----LGAE---------QCINYHEEDFLLAISTPV 216 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH----HTCS---------EEEETTTSCHHHHCCSCE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHH----cCCC---------EEEeCCCcchhhhhccCC
Confidence 45789999997 554 666666665 7899999987444555543 3432 122322211000011468
Q ss_pred cEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 197 DYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 197 D~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
|+|+-+-- -+.+ ....++++++|+++...
T Consensus 217 D~v~d~~g------~~~~-~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 217 DAVIDLVG------GDVG-IQSIDCLKETGCIVSVP 245 (321)
T ss_dssp EEEEESSC------HHHH-HHHGGGEEEEEEEEECC
T ss_pred CEEEECCC------cHHH-HHHHHhccCCCEEEEeC
Confidence 87775422 2333 67778889999877653
No 346
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=89.80 E-value=0.17 Score=44.93 Aligned_cols=96 Identities=21% Similarity=0.339 Sum_probs=58.7
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCCE-EEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC----Cc
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQ-VILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ----DL 191 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~~-V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~----~~ 191 (281)
..+|.+||=.|+|. |..++.+|+ .|++ ++++|. ++.++++++ .+.. ..++..+.... .+
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~---------~~i~~~~~~~~~~~~~~ 224 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAM---------QTFNSSEMSAPQMQSVL 224 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS---------EEEETTTSCHHHHHHHH
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCe---------EEEeCCCCCHHHHHHhh
Confidence 35789999999875 555555555 6764 789998 666776653 3332 12222221100 01
Q ss_pred -CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 192 -IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 192 -~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
....+|+|+-+--. ...++...++++++|.+.+....
T Consensus 225 ~~~~g~d~v~d~~G~------~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 225 RELRFNQLILETAGV------PQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp GGGCSSEEEEECSCS------HHHHHHHHHHCCTTCEEEECCCC
T ss_pred cccCCcccccccccc------cchhhhhhheecCCeEEEEEecc
Confidence 12457877754332 56777888899999998776543
No 347
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.08 E-value=0.25 Score=44.38 Aligned_cols=92 Identities=24% Similarity=0.214 Sum_probs=50.8
Q ss_pred CCCeEEEECCCc-CHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-CCcCCCCCc
Q 023543 122 HGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-QDLIQPLPD 197 (281)
Q Consensus 122 ~~~~VLELGcGt-G~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-~~~~~~~fD 197 (281)
+|.+||=+|+|. |...+.+|+ .|++|+++|. ++.++.+++ ..+.. ..++..+... .... ..+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~lGa~---------~v~~~~~~~~~~~~~-~~~D 253 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NFGAD---------SFLVSRDQEQMQAAA-GTLD 253 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TSCCS---------EEEETTCHHHHHHTT-TCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCc---------eEEeccCHHHHHHhh-CCCC
Confidence 788999999753 444444444 6899999998 666665542 22221 1122221100 0011 3689
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
+|+-+--. .. .++...++++++|+++...
T Consensus 254 ~vid~~g~--~~----~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 254 GIIDTVSA--VH----PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEEECCSS--CC----CSHHHHHHEEEEEEEEECC
T ss_pred EEEECCCc--HH----HHHHHHHHHhcCCEEEEEc
Confidence 88854321 11 2334456778888876543
No 348
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=88.72 E-value=0.15 Score=45.17 Aligned_cols=94 Identities=20% Similarity=0.172 Sum_probs=54.3
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-c-CCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-C---Cc
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-L-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-Q---DL 191 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~-g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-~---~~ 191 (281)
..+|.+||=+|+|. |..++.+++ . |++|+++|. ++.++++++ .+.. ..++..+... . ..
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~---------~~i~~~~~~~~~~v~~~ 227 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGAD---------VTINSGDVNPVDEIKKI 227 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCS---------EEEEC-CCCHHHHHHHH
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCe---------EEEeCCCCCHHHHhhhh
Confidence 35788999999986 444444443 3 679999999 665665542 2322 1122221110 0 01
Q ss_pred -CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 -IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 -~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
....+|+++-+-.- ...+....++++++|.+++..
T Consensus 228 t~g~g~d~~~~~~~~------~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 228 TGGLGVQSAIVCAVA------RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp TTSSCEEEEEECCSC------HHHHHHHHHTEEEEEEEEECC
T ss_pred cCCCCceEEEEeccC------cchhheeheeecCCceEEEEe
Confidence 12346666554332 566777788899999876654
No 349
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=88.71 E-value=0.024 Score=50.61 Aligned_cols=91 Identities=16% Similarity=0.166 Sum_probs=55.2
Q ss_pred CCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-CCC---cCC
Q 023543 122 HGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-DQD---LIQ 193 (281)
Q Consensus 122 ~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~~~---~~~ 193 (281)
+|.+||-+|+|. |...+.+|+ .|+ +|+++|. ++.++.+++- . . ..++..+.. ... ...
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l--a---~---------~v~~~~~~~~~~~~~~~~~ 229 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY--A---D---------RLVNPLEEDLLEVVRRVTG 229 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT--C---S---------EEECTTTSCHHHHHHHHHS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--H---H---------hccCcCccCHHHHHHHhcC
Confidence 889999999853 555555555 688 8999998 5556555431 1 1 112221110 000 113
Q ss_pred CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 194 PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
..+|+|+-+--. ...++...++++++|++++..
T Consensus 230 ~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 230 SGVEVLLEFSGN------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp SCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 468988855332 456777788889999876653
No 350
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=88.51 E-value=0.17 Score=45.22 Aligned_cols=88 Identities=14% Similarity=0.125 Sum_probs=54.6
Q ss_pred CeEEEECCCc-CHHH-HHHH-H-cCCE-EEEEec-hh---HHHHHHHHHHHhhcCCCCCCceEEEEEecCCC-CCC--Cc
Q 023543 124 KKIVELGSGC-GLVG-CIAA-L-LGAQ-VILTDL-PD---RLRLLKKNIENNLRHGDLRGSAVVTELTWGDD-PDQ--DL 191 (281)
Q Consensus 124 ~~VLELGcGt-G~~~-i~~a-~-~g~~-V~~tD~-~~---~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~-~~~--~~ 191 (281)
.+||=+|+|. |..+ +.+| + .|++ |+++|. ++ .++.+++ .+.. .+ +..+. ... ..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa~-------~v---~~~~~~~~~i~~~ 239 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDAT-------YV---DSRQTPVEDVPDV 239 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTCE-------EE---ETTTSCGGGHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCCc-------cc---CCCccCHHHHHHh
Confidence 8999999864 6666 6666 4 6886 999999 66 6676652 2221 11 22211 011 01
Q ss_pred CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
+..+|+|+-+--. ...++...++++++|++++..
T Consensus 240 -~gg~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 240 -YEQMDFIYEATGF------PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp -SCCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred -CCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEEe
Confidence 2378888754332 446777788899999877654
No 351
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=87.89 E-value=0.52 Score=42.78 Aligned_cols=99 Identities=22% Similarity=0.325 Sum_probs=58.9
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC--C---C
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD--Q---D 190 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~--~---~ 190 (281)
..+|.+||-+|||. |..++.+|+ .|+ +|+++|. ++.++.+++ .+ .. .++..+... . .
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lG--------a~--~i~~~~~~~~~~~~~~ 248 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AG--------FE--TIDLRNSAPLRDQIDQ 248 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TT--------CE--EEETTSSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cC--------Cc--EEcCCCcchHHHHHHH
Confidence 35788999999875 777776666 688 8999998 666766642 22 11 233322110 0 0
Q ss_pred cC-CCCCcEEEEccccCC--------CCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 LI-QPLPDYVLGSDVIYS--------EGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 ~~-~~~fD~Iia~d~iy~--------~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.. ...+|+|+-+---.. .......++...++++++|++++..
T Consensus 249 ~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 249 ILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred HhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 11 236898885432110 0011235777788899999876543
No 352
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=87.84 E-value=0.63 Score=40.82 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=34.6
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCCE---EEEEec-hhHHHHHHHHH
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGAQ---VILTDL-PDRLRLLKKNI 163 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~~---V~~tD~-~~~l~~~~~N~ 163 (281)
.+.+|+||-||+|-+++.+.+.|.+ |.++|+ +.+.+..+.|.
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~ 60 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH 60 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC
Confidence 4559999999999988888888875 489999 77777777663
No 353
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=87.20 E-value=10 Score=32.06 Aligned_cols=83 Identities=19% Similarity=0.207 Sum_probs=52.4
Q ss_pred ccccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC--CCcC
Q 023543 118 MLLLHGKKIVELGSGCGL---VGCIAALLGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD--QDLI 192 (281)
Q Consensus 118 ~~~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~--~~~~ 192 (281)
++.++||++|==|++.|+ ++..++..|++|+.+|.... +.+.+.++..+ .++.+...|..+... ..+.
T Consensus 4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~-~~~~~~~~~~g------~~~~~~~~Dv~d~~~v~~~~~ 76 (247)
T 4hp8_A 4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP-DETLDIIAKDG------GNASALLIDFADPLAAKDSFT 76 (247)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC-HHHHHHHHHTT------CCEEEEECCTTSTTTTTTSST
T ss_pred CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH-HHHHHHHHHhC------CcEEEEEccCCCHHHHHHHHH
Confidence 456899999999998884 45566678999999998322 22223333333 356667767654332 1223
Q ss_pred CCCCcEEEEccccCC
Q 023543 193 QPLPDYVLGSDVIYS 207 (281)
Q Consensus 193 ~~~fD~Iia~d~iy~ 207 (281)
..++|+++.+--+..
T Consensus 77 ~g~iDiLVNNAGi~~ 91 (247)
T 4hp8_A 77 DAGFDILVNNAGIIR 91 (247)
T ss_dssp TTCCCEEEECCCCCC
T ss_pred hCCCCEEEECCCCCC
Confidence 457899998655443
No 354
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=87.08 E-value=0.59 Score=41.04 Aligned_cols=93 Identities=16% Similarity=0.092 Sum_probs=53.7
Q ss_pred CCC-eEEEECC-C-cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEE-ecCCCCCCCcCCCC
Q 023543 122 HGK-KIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTEL-TWGDDPDQDLIQPL 195 (281)
Q Consensus 122 ~~~-~VLELGc-G-tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l-~w~~~~~~~~~~~~ 195 (281)
+|. +||=.|| | .|...+.+|+ .|++|++++. ++.++.+++ .+.. . +... +.....-..+....
T Consensus 149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~-----~--v~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 149 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGAS-----E--VISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTCS-----E--EEEHHHHCSSCCCSSCCCC
T ss_pred CCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCc-----E--EEECCCchHHHHHHhhcCC
Confidence 454 8999997 4 3666655554 7899999999 666776653 2322 1 1111 11000011122346
Q ss_pred CcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 196 PDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 196 fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
+|+|+-+-- . +.+....++++++|++++..
T Consensus 218 ~d~vid~~g-----~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 218 WQGAVDPVG-----G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EEEEEESCC-----T--HHHHHHHTTEEEEEEEEECC
T ss_pred ccEEEECCc-----H--HHHHHHHHhhcCCCEEEEEe
Confidence 888775432 1 25666677889999877654
No 355
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=86.65 E-value=3.6 Score=34.86 Aligned_cols=80 Identities=10% Similarity=0.089 Sum_probs=47.5
Q ss_pred cCCCeEEEECCCcCHHHHHH----HHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc--
Q 023543 121 LHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~----a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-- 191 (281)
+++++||=.|++. -+|..+ +..|++|++++. ++.++.+...+...+.. .++.+...|..+.... .+
T Consensus 30 l~~k~vlVTGasg-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~ 104 (279)
T 1xg5_A 30 WRDRLALVTGASG-GIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP----GTLIPYRCDLSNEEDILSMFSA 104 (279)
T ss_dssp GTTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS----SEEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCC----ceEEEEEecCCCHHHHHHHHHH
Confidence 5789999999654 445544 446999999999 55565555555443322 3455666554432110 00
Q ss_pred ---CCCCCcEEEEcccc
Q 023543 192 ---IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 ---~~~~fD~Iia~d~i 205 (281)
...++|+||.+--+
T Consensus 105 ~~~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 105 IRSQHSGVDICINNAGL 121 (279)
T ss_dssp HHHHHCCCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCCC
Confidence 01368999976554
No 356
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=86.63 E-value=0.63 Score=40.85 Aligned_cols=91 Identities=15% Similarity=0.069 Sum_probs=52.8
Q ss_pred CCC-eEEEECC-C-cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCC---CCCCcCC
Q 023543 122 HGK-KIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD---PDQDLIQ 193 (281)
Q Consensus 122 ~~~-~VLELGc-G-tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~---~~~~~~~ 193 (281)
++. +||=.|+ | .|...+.+|+ .|++|++++. ++.++.+++ .+.. . + ++..+. .-..+..
T Consensus 148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~-----~--~--i~~~~~~~~~~~~~~~ 214 (328)
T 1xa0_A 148 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAK-----E--V--LAREDVMAERIRPLDK 214 (328)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCS-----E--E--EECC---------CCS
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCc-----E--E--EecCCcHHHHHHHhcC
Confidence 454 8999997 4 3666666665 7889999999 666776653 2322 1 1 111111 0011223
Q ss_pred CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 194 PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.++|+|+-+-- . ..+....++++++|++++..
T Consensus 215 ~~~d~vid~~g--~-----~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 215 QRWAAAVDPVG--G-----RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp CCEEEEEECST--T-----TTHHHHHHTEEEEEEEEECS
T ss_pred CcccEEEECCc--H-----HHHHHHHHhhccCCEEEEEe
Confidence 46898875432 1 13556667889999877654
No 357
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=86.54 E-value=4.1 Score=36.34 Aligned_cols=93 Identities=11% Similarity=-0.012 Sum_probs=54.5
Q ss_pred cCCCeEEEECCC--cCHHHHHHHH-cCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-C---CCcCC
Q 023543 121 LHGKKIVELGSG--CGLVGCIAAL-LGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-D---QDLIQ 193 (281)
Q Consensus 121 ~~~~~VLELGcG--tG~~~i~~a~-~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~---~~~~~ 193 (281)
.+|.+||=+|++ .|..++.+|+ .|++|+++.-++.++.+++ .+.. ..++..+.. . ....+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----lGa~---------~vi~~~~~~~~~~v~~~t~ 229 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKS----RGAE---------EVFDYRAPNLAQTIRTYTK 229 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH----TTCS---------EEEETTSTTHHHHHHHHTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHH----cCCc---------EEEECCCchHHHHHHHHcc
Confidence 578899999983 4666666665 7899888854555665542 3322 122222110 0 01223
Q ss_pred CCCcEEEEccccCCCCcHHHHHHHHHHhh-CCCcEEEEEE
Q 023543 194 PLPDYVLGSDVIYSEGAVGDLLDTLLQLC-GTQTTIFLAG 232 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~~~~~ll~~l~~ll-~~~g~~~l~~ 232 (281)
..+|+|+-+--- ...+....+.+ +++|++++..
T Consensus 230 g~~d~v~d~~g~------~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 230 NNLRYALDCITN------VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp TCCCEEEESSCS------HHHHHHHHHHSCTTCEEEEESS
T ss_pred CCccEEEECCCc------hHHHHHHHHHhhcCCCEEEEEe
Confidence 458988754332 45566666777 6888876643
No 358
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=85.67 E-value=3.4 Score=34.92 Aligned_cols=107 Identities=19% Similarity=0.142 Sum_probs=62.2
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-h-hHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc-
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-P-DRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~-~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~- 191 (281)
.++++++|=-|++.|+ ++..+++.|++|+++|. + +.++.+.+.+...+ .++.+...|..+.... .+
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG------SDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTSHHHHHHHHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHH
Confidence 4789999999987663 23344557999999887 3 34555555555433 3566667665432110 00
Q ss_pred ----CCCCCcEEEEccccCCCC--------c-----------HHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 ----IQPLPDYVLGSDVIYSEG--------A-----------VGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ----~~~~fD~Iia~d~iy~~~--------~-----------~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.-++.|++|.+.-+.... . .-.+++.+...++++|.+++..
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 014689998765543311 1 1234555666677777766554
No 359
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=85.39 E-value=4.7 Score=34.22 Aligned_cols=106 Identities=23% Similarity=0.192 Sum_probs=61.2
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-h-hHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc-
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-P-DRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~-~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~- 191 (281)
.++++++|=-|++.|+ ++..+++.|++|+++|. + +.++.+...+...+ .++.+...|..+.... .+
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG------GRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHH
Confidence 4789999999987663 23344557999999976 3 44555544444432 3466666554432110 00
Q ss_pred ----CCCCCcEEEEccccCCCC--------c-----------HHHHHHHHHHhhCCCcEEEEE
Q 023543 192 ----IQPLPDYVLGSDVIYSEG--------A-----------VGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 192 ----~~~~fD~Iia~d~iy~~~--------~-----------~~~ll~~l~~ll~~~g~~~l~ 231 (281)
..++.|++|.+.-+.... . .-.+++.+...++++|.+++.
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 013789999865543321 1 123455566666777776654
No 360
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=85.31 E-value=1.1 Score=40.58 Aligned_cols=98 Identities=28% Similarity=0.342 Sum_probs=59.3
Q ss_pred cCCCeEEEECCCc-CHHHHHHHH-cCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC--C---Cc
Q 023543 121 LHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD--Q---DL 191 (281)
Q Consensus 121 ~~~~~VLELGcGt-G~~~i~~a~-~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~--~---~~ 191 (281)
.+|.+||-+|||. |+.++.+|+ .|+ +|+++|. ++.++.+++ .+. .+ ++..+..+ . ..
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa--------~~--i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF--------EI--ADLSLDTPLHEQIAAL 249 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC--------EE--EETTSSSCHHHHHHHH
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC--------cE--EccCCcchHHHHHHHH
Confidence 4788999999875 777776666 688 7999999 667777753 221 11 23222110 0 01
Q ss_pred C-CCCCcEEEEcccc---------CCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 I-QPLPDYVLGSDVI---------YSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ~-~~~fD~Iia~d~i---------y~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
. ...+|+|+-+--- ++.......++...++++++|++++..
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred hCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 1 2468988854321 111122346777788899999887654
No 361
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=85.22 E-value=10 Score=32.05 Aligned_cols=81 Identities=16% Similarity=0.110 Sum_probs=49.0
Q ss_pred ccCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCC-CCC----
Q 023543 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD-PDQ---- 189 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~-~~~---- 189 (281)
..++++||=-|++.| +|.. +++.|++|++++. .+.++.+.+.+...+. .++.+..+|..+. ...
T Consensus 9 ~~~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dl~~~~~~v~~~~ 82 (311)
T 3o26_A 9 VTKRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH-----ENVVFHQLDVTDPIATMSSLA 82 (311)
T ss_dssp ---CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-----CSEEEEECCTTSCHHHHHHHH
T ss_pred cCCCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-----CceEEEEccCCCcHHHHHHHH
Confidence 357889999998765 3443 4457999999999 5555555555544321 3677777776543 110
Q ss_pred -Cc--CCCCCcEEEEccccC
Q 023543 190 -DL--IQPLPDYVLGSDVIY 206 (281)
Q Consensus 190 -~~--~~~~fD~Iia~d~iy 206 (281)
.+ ..+++|++|.+--+.
T Consensus 83 ~~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 83 DFIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHhCCCCCEEEECCccc
Confidence 00 014789999866654
No 362
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=85.04 E-value=1 Score=42.31 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=34.5
Q ss_pred CCeEEEECCCcCHHHHHHHHcCCE-EEEEec-hhHHHHHHHHH
Q 023543 123 GKKIVELGSGCGLVGCIAALLGAQ-VILTDL-PDRLRLLKKNI 163 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~~g~~-V~~tD~-~~~l~~~~~N~ 163 (281)
.-+++||-||+|-+++.+.+.|.+ |.++|+ +.+.+..+.|.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHS
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhc
Confidence 358999999999888888888887 899999 77777777764
No 363
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=84.77 E-value=1.8 Score=38.37 Aligned_cols=96 Identities=9% Similarity=-0.017 Sum_probs=51.4
Q ss_pred cCC-CeEEEECC-Cc-CHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCC----CCCCC-
Q 023543 121 LHG-KKIVELGS-GC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD----DPDQD- 190 (281)
Q Consensus 121 ~~~-~~VLELGc-Gt-G~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~----~~~~~- 190 (281)
.+| .+||=.|+ |. |..++.+|+ .|++|+++.. ++.+...++.++..+.. ..++..+ .....
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~---------~vi~~~~~~~~~~~~~i 235 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT---------QVITEDQNNSREFGPTI 235 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS---------EEEEHHHHHCGGGHHHH
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe---------EEEecCccchHHHHHHH
Confidence 467 89999997 43 666666665 7999888864 33211111222333432 1122211 00000
Q ss_pred --c---CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 --L---IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 --~---~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
. ....+|+|+-+-- -..+. ...++++++|++++..
T Consensus 236 ~~~t~~~~~g~Dvvid~~G------~~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 236 KEWIKQSGGEAKLALNCVG------GKSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHHHHHHTCCEEEEEESSC------HHHHH-HHHHTSCTTCEEEECC
T ss_pred HHHhhccCCCceEEEECCC------chhHH-HHHHHhccCCEEEEec
Confidence 1 1346898875432 23344 5568899999877653
No 364
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=84.46 E-value=1.2 Score=39.42 Aligned_cols=98 Identities=16% Similarity=0.185 Sum_probs=57.9
Q ss_pred CCeEEEECCCc-C-HHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcC----CCCC---------CceEEEEEecCCC
Q 023543 123 GKKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRH----GDLR---------GSAVVTELTWGDD 186 (281)
Q Consensus 123 ~~~VLELGcGt-G-~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~----~~~~---------~~i~~~~l~w~~~ 186 (281)
.++|-=||||+ | -++..+|..|.+|++.|. ++.++.+..+++.+-.. .... .++.... +.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~-~l--- 81 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCT-NL--- 81 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEEC-CH---
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccccc-ch---
Confidence 46888999996 4 356677788999999999 77787777666544211 0000 0111110 00
Q ss_pred CCCCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEE
Q 023543 187 PDQDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTI 228 (281)
Q Consensus 187 ~~~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~ 228 (281)
.. .-...|+|+-+ +.-+.+.-..+++.+..+++|+.++
T Consensus 82 -~~--a~~~ad~ViEa-v~E~l~iK~~lf~~l~~~~~~~aIl 119 (319)
T 3ado_A 82 -AE--AVEGVVHIQEC-VPENLDLKRKIFAQLDSIVDDRVVL 119 (319)
T ss_dssp -HH--HTTTEEEEEEC-CCSCHHHHHHHHHHHHTTCCSSSEE
T ss_pred -Hh--HhccCcEEeec-cccHHHHHHHHHHHHHHHhhhccee
Confidence 00 01235666643 3334555678888888888887654
No 365
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.07 E-value=3.5 Score=35.08 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=54.0
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC-----
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD----- 190 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~----- 190 (281)
.++||.+|==|++.|+ ++..++..|++|+++|. ++.++.+.+.++..+ .++.+...|..+..+..
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g------~~~~~~~~Dvt~~~~v~~~~~~ 77 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG------KEVLGVKADVSKKKDVEEFVRR 77 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEEccCCCHHHHHHHHHH
Confidence 3689999999988884 44556678999999999 777777777776654 34666776654322100
Q ss_pred -c-CCCCCcEEEEcccc
Q 023543 191 -L-IQPLPDYVLGSDVI 205 (281)
Q Consensus 191 -~-~~~~fD~Iia~d~i 205 (281)
. .-.+.|+++.+--+
T Consensus 78 ~~~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 78 TFETYSRIDVLCNNAGI 94 (254)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCcc
Confidence 0 11568999976543
No 366
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=83.19 E-value=5.4 Score=33.60 Aligned_cols=83 Identities=16% Similarity=0.210 Sum_probs=51.2
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC-c---
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-L--- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~-~--- 191 (281)
.+.+++||=-|++.|+ ++..++..|++|+++|. .+.++.+.+.+....- .++.+...|..+..... +
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~ 91 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG-----TDVHTVAIDLAEPDAPAELARR 91 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-----CCEEEEECCTTSTTHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CcEEEEEecCCCHHHHHHHHHH
Confidence 3678999999987663 23344557999999999 6666655555544211 35777777665432210 0
Q ss_pred ---CCCCCcEEEEccccCC
Q 023543 192 ---IQPLPDYVLGSDVIYS 207 (281)
Q Consensus 192 ---~~~~fD~Iia~d~iy~ 207 (281)
..++.|++|.+--+..
T Consensus 92 ~~~~~g~id~lv~nAg~~~ 110 (266)
T 4egf_A 92 AAEAFGGLDVLVNNAGISH 110 (266)
T ss_dssp HHHHHTSCSEEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCcCC
Confidence 0147899998655443
No 367
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=83.09 E-value=2.8 Score=38.06 Aligned_cols=41 Identities=27% Similarity=0.396 Sum_probs=28.5
Q ss_pred cCCCeEEEECCCc-CHHHHHHH-HcCCEEEEEec-hhHHHHHHH
Q 023543 121 LHGKKIVELGSGC-GLVGCIAA-LLGAQVILTDL-PDRLRLLKK 161 (281)
Q Consensus 121 ~~~~~VLELGcGt-G~~~i~~a-~~g~~V~~tD~-~~~l~~~~~ 161 (281)
+++++|+=+|+|. |......+ .+|++|++.|. ++.++.++.
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4778999999873 43333222 37999999999 666666543
No 368
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=82.99 E-value=1.5 Score=39.15 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=33.4
Q ss_pred cCCCeEEEECCCcCHHHHHHHHc-C--CEEEEEec-hhHHHHHH
Q 023543 121 LHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PDRLRLLK 160 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~~-g--~~V~~tD~-~~~l~~~~ 160 (281)
.+|..++|..||.|--+..++.. + .+|+++|. +++++.++
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 46889999999999888877763 3 48999999 88998874
No 369
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=82.90 E-value=9.4 Score=33.87 Aligned_cols=111 Identities=14% Similarity=0.077 Sum_probs=62.1
Q ss_pred CCeEEEECCCcCHHHHHHHHc---CCEEEEEechhHHHHHHHHHHHhh--------------cCCC----CCCceEEEEE
Q 023543 123 GKKIVELGSGCGLVGCIAALL---GAQVILTDLPDRLRLLKKNIENNL--------------RHGD----LRGSAVVTEL 181 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~~---g~~V~~tD~~~~l~~~~~N~~~n~--------------~~~~----~~~~i~~~~l 181 (281)
.+.|+-||||.=.-..-+... +.+++=+|.|++++.=++.+..+. .... ...+......
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~ 170 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGA 170 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEEC
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEcc
Confidence 568999999986555555443 457888899888664333333211 0000 0245666666
Q ss_pred ecCCC--CCC-----CcCCCCCcEEEEccccCC--CCcHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 182 TWGDD--PDQ-----DLIQPLPDYVLGSDVIYS--EGAVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 182 ~w~~~--~~~-----~~~~~~fD~Iia~d~iy~--~~~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
|..+. .+. .+.....-++++-.++++ ++....+++.+.....+ |.+++..+.
T Consensus 171 DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~-~~~i~yE~i 231 (334)
T 3iei_A 171 DLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFER-AMFINYEQV 231 (334)
T ss_dssp CTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSS-EEEEEEEEC
T ss_pred ccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCC-ceEEEEecc
Confidence 64331 100 011123346666555443 56789999999987754 444444444
No 370
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=82.80 E-value=1.3 Score=39.40 Aligned_cols=42 Identities=24% Similarity=0.296 Sum_probs=31.5
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCCEEEEEec-hhHHHHHHH
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~~V~~tD~-~~~l~~~~~ 161 (281)
..+|.+||-+|+|. |...+.+|+ .|++|+++|. ++.++.+++
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK 221 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 35789999999864 555555555 7899999998 666777654
No 371
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=82.74 E-value=1.6 Score=38.90 Aligned_cols=92 Identities=23% Similarity=0.174 Sum_probs=56.6
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC------C
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ------D 190 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~------~ 190 (281)
..+|.+||=+|+|. |..++.+|+ .|++|+++|. ++.++.+++ .+.. ..++ .+..+. .
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---------~vi~-~~~~~~~~~v~~~ 252 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA----LGAD---------HGIN-RLEEDWVERVYAL 252 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HTCS---------EEEE-TTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH----cCCC---------EEEc-CCcccHHHHHHHH
Confidence 35789999999775 666665555 7899999999 666766643 3322 1222 111110 0
Q ss_pred cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 ~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.....+|+|+-+-- . ..+....++++++|++++..
T Consensus 253 ~~g~g~D~vid~~g---~----~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 253 TGDRGADHILEIAG---G----AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp HTTCCEEEEEEETT---S----SCHHHHHHHEEEEEEEEEEC
T ss_pred hCCCCceEEEECCC---h----HHHHHHHHHhhcCCEEEEEe
Confidence 11347898886533 2 23555667889999887664
No 372
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=82.12 E-value=5 Score=34.42 Aligned_cols=80 Identities=18% Similarity=0.168 Sum_probs=46.7
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hh-HHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc-
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PD-RLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~-~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~- 191 (281)
.+++++||=-|++.|+ ++..++..|++|+++|. ++ ..+.+.+-++..+ .++.+...|..+.... .+
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG------VKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT------CCEEEEESCTTSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHH
Confidence 3688999999987663 23344557999999998 43 3444444333332 3566666665432110 00
Q ss_pred ----CCCCCcEEEEcccc
Q 023543 192 ----IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 ----~~~~fD~Iia~d~i 205 (281)
.-.++|++|.+.-+
T Consensus 118 ~~~~~~g~iD~lvnnAg~ 135 (291)
T 3ijr_A 118 ETVRQLGSLNILVNNVAQ 135 (291)
T ss_dssp HHHHHHSSCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 01468999976443
No 373
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=81.71 E-value=7.9 Score=32.34 Aligned_cols=81 Identities=14% Similarity=0.136 Sum_probs=47.8
Q ss_pred ccCCCeEEEECCC--cCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC--c
Q 023543 120 LLHGKKIVELGSG--CGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD--L 191 (281)
Q Consensus 120 ~~~~~~VLELGcG--tG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~--~ 191 (281)
.+++++||=.|++ .|+ ++..+++.|++|++++. +...+.+++-....+. .++.+...|..+..... +
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~ 78 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR-----NDSIILPCDVTNDAEIETCF 78 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-----CCCEEEECCCSSSHHHHHHH
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC-----CCceEEeCCCCCHHHHHHHH
Confidence 3678999999976 453 33445567999999998 4444444443333221 25667776654332110 0
Q ss_pred -----CCCCCcEEEEcccc
Q 023543 192 -----IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 -----~~~~fD~Iia~d~i 205 (281)
..+++|+++.+.-+
T Consensus 79 ~~~~~~~g~id~li~~Ag~ 97 (266)
T 3oig_A 79 ASIKEQVGVIHGIAHCIAF 97 (266)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHhCCeeEEEEcccc
Confidence 01468998876544
No 374
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=81.66 E-value=6.1 Score=34.43 Aligned_cols=101 Identities=18% Similarity=0.190 Sum_probs=57.0
Q ss_pred ccCCCeEEEECCCc-C-HHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEE-EEEecCCCCCCCcCCCC
Q 023543 120 LLHGKKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV-TELTWGDDPDQDLIQPL 195 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G-~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~-~~l~w~~~~~~~~~~~~ 195 (281)
.+..++|.=+|+|. | .++..+++.|.+|++. . ++.++.++++ +..... ..... ..+....... . -.+
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~----g~~~~~-~~~~~~~~~~~~~~~~-~--~~~ 86 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEAT----GLRLET-QSFDEQVKVSASSDPS-A--VQG 86 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHH----CEEEEC-SSCEEEECCEEESCGG-G--GTT
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhC----CeEEEc-CCCcEEEeeeeeCCHH-H--cCC
Confidence 46778999999985 3 5566677788899998 7 6666555432 221100 00110 0011001111 1 157
Q ss_pred CcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 196 PDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 196 fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
+|+|+.+=.-+ .++.+++.+...++++..++...
T Consensus 87 ~D~vilavk~~---~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 87 ADLVLFCVKST---DTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp CSEEEECCCGG---GHHHHHHHHTTTSCTTCEEEEEC
T ss_pred CCEEEEEcccc---cHHHHHHHHHHhcCCCCEEEEeC
Confidence 89998765443 56888888888888887665443
No 375
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=81.66 E-value=7.9 Score=34.16 Aligned_cols=32 Identities=25% Similarity=0.259 Sum_probs=23.0
Q ss_pred ccCCCeEEEECC-C-cCHHHHHHHH-cCCEEEEEe
Q 023543 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTD 151 (281)
Q Consensus 120 ~~~~~~VLELGc-G-tG~~~i~~a~-~g~~V~~tD 151 (281)
..+|.+||=+|+ | .|..++.+|+ .|++++++.
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~ 199 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVV 199 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEe
Confidence 357899999997 4 3777776666 788865553
No 376
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=80.96 E-value=7.6 Score=33.82 Aligned_cols=83 Identities=17% Similarity=0.099 Sum_probs=48.6
Q ss_pred CCCcEEEEcccc---CCC----CcHHH----HHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHhcCCeEEEEecCCCC
Q 023543 194 PLPDYVLGSDVI---YSE----GAVGD----LLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAMKDFVIGRVEQTQWH 262 (281)
Q Consensus 194 ~~fD~Iia~d~i---y~~----~~~~~----ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~~~f~v~~i~~~~~~ 262 (281)
.++|+|++.-.. ++. .++.. ++....++|+|||.+++-.-.-.+...+.+...+.+.|...++-...-.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~vKP~AS 284 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVCKPKSS 284 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCTTC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcceeeeeCCCCc
Confidence 569998873222 222 23333 4444555789999987665444433457788888999986666443333
Q ss_pred CCCCCCcEEEEEEEe
Q 023543 263 PDYCSPRVVVYILVK 277 (281)
Q Consensus 263 ~~~~~~~~~i~~~~~ 277 (281)
.. +.+-+.++.-.+
T Consensus 285 R~-StEvf~La~gf~ 298 (320)
T 2hwk_A 285 LE-ETEVLFVFIGYD 298 (320)
T ss_dssp CS-TTCEEEEEEEEC
T ss_pred cc-cceEEEEEEeec
Confidence 33 555555554443
No 377
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=80.82 E-value=6.6 Score=33.14 Aligned_cols=81 Identities=22% Similarity=0.174 Sum_probs=47.2
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEech-------------hHHHHHHHHHHHhhcCCCCCCceEEEEEec
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDLP-------------DRLRLLKKNIENNLRHGDLRGSAVVTELTW 183 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~~-------------~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w 183 (281)
.+++++||=-|++.|+ ++..++..|++|+++|.. +.++.+...+...+ .++.+...|.
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~D~ 80 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG------RKAYTAEVDV 80 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT------SCEEEEECCT
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC------CceEEEEccC
Confidence 4689999999987663 233445579999999863 22333433333332 3566777665
Q ss_pred CCCCCC--Cc-----CCCCCcEEEEccccC
Q 023543 184 GDDPDQ--DL-----IQPLPDYVLGSDVIY 206 (281)
Q Consensus 184 ~~~~~~--~~-----~~~~fD~Iia~d~iy 206 (281)
.+.... .+ .-+++|++|.+.-+.
T Consensus 81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 110 (287)
T 3pxx_A 81 RDRAAVSRELANAVAEFGKLDVVVANAGIC 110 (287)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 432110 00 014789999865543
No 378
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=80.78 E-value=12 Score=31.93 Aligned_cols=106 Identities=16% Similarity=0.134 Sum_probs=59.8
Q ss_pred ccCCCeEEEECCC--cCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-Cc-
Q 023543 120 LLHGKKIVELGSG--CGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DL- 191 (281)
Q Consensus 120 ~~~~~~VLELGcG--tG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~- 191 (281)
.+++++||=-|++ .|+ ++..+++.|++|++++. +...+.+++-.... .++.+...|..+.... .+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~Dv~d~~~v~~~~ 100 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL-------GAFVAGHCDVADAASIDAVF 100 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH-------TCEEEEECCTTCHHHHHHHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-------CCceEEECCCCCHHHHHHHH
Confidence 3688999999976 333 34455567999999998 44344444333332 2355666555432110 00
Q ss_pred -----CCCCCcEEEEccccCC---------C---Cc-----------HHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 -----IQPLPDYVLGSDVIYS---------E---GA-----------VGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 -----~~~~fD~Iia~d~iy~---------~---~~-----------~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.-.++|++|.+.-+.. . +. .-.+++.+..+++++|.++...
T Consensus 101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 1147899998655442 1 11 1234555566667777766544
No 379
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=79.75 E-value=15 Score=31.38 Aligned_cols=81 Identities=17% Similarity=0.085 Sum_probs=45.8
Q ss_pred ccCCCeEEEECCCcCHHHHHHH----HcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEE-EEecCCCCCCCcCC
Q 023543 120 LLHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVT-ELTWGDDPDQDLIQ 193 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a----~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~-~l~w~~~~~~~~~~ 193 (281)
..++++||=.|+ +|.+|..++ ..|.+|++++. +...+.+...+.... . .++.+. ..|..+.....-.-
T Consensus 8 ~~~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~----~~~~~~~~~D~~d~~~~~~~~ 81 (342)
T 1y1p_A 8 LPEGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-P----GRFETAVVEDMLKQGAYDEVI 81 (342)
T ss_dssp SCTTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-T----TTEEEEECSCTTSTTTTTTTT
T ss_pred CCCCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-C----CceEEEEecCCcChHHHHHHH
Confidence 457889999995 577776554 36889999998 444443333222111 0 245555 45554332211111
Q ss_pred CCCcEEEEccccC
Q 023543 194 PLPDYVLGSDVIY 206 (281)
Q Consensus 194 ~~fD~Iia~d~iy 206 (281)
..+|+|+.+-...
T Consensus 82 ~~~d~vih~A~~~ 94 (342)
T 1y1p_A 82 KGAAGVAHIASVV 94 (342)
T ss_dssp TTCSEEEECCCCC
T ss_pred cCCCEEEEeCCCC
Confidence 3689999765443
No 380
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=79.26 E-value=3.2 Score=35.37 Aligned_cols=82 Identities=23% Similarity=0.122 Sum_probs=52.9
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC------
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ------ 189 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~------ 189 (281)
.++||++|=-|++.|+ ++..+++.|++|+++|. ++.++.+.+.+...+. ++.+...|..+..+.
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~------~~~~~~~Dv~~~~~v~~~~~~ 79 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY------DAHGVAFDVTDELAIEAAFSK 79 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC------CEEECCCCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC------cEEEEEeeCCCHHHHHHHHHH
Confidence 4789999999988874 44556678999999999 6667666666655542 455555554332110
Q ss_pred C-cCCCCCcEEEEccccCC
Q 023543 190 D-LIQPLPDYVLGSDVIYS 207 (281)
Q Consensus 190 ~-~~~~~fD~Iia~d~iy~ 207 (281)
. -.-.+.|+++.+--+..
T Consensus 80 ~~~~~G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 80 LDAEGIHVDILINNAGIQY 98 (255)
T ss_dssp HHHTTCCCCEEEECCCCCC
T ss_pred HHHHCCCCcEEEECCCCCC
Confidence 0 01256899998655544
No 381
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=78.19 E-value=2.8 Score=37.26 Aligned_cols=41 Identities=27% Similarity=0.424 Sum_probs=30.4
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-c-CCEEEEEec-hhHHHHHH
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-L-GAQVILTDL-PDRLRLLK 160 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~-g~~V~~tD~-~~~l~~~~ 160 (281)
..+|.+||=+|+|. |..++.+|+ . |++|+++|. ++.++.++
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~ 228 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE 228 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 35788999999863 555555555 6 899999998 66677665
No 382
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=77.90 E-value=19 Score=29.19 Aligned_cols=75 Identities=13% Similarity=0.095 Sum_probs=44.2
Q ss_pred ccCCCeEEEECCCcCHHHHHHH----HcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCce-EEEEEecCCCCCCCcCC
Q 023543 120 LLHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSA-VVTELTWGDDPDQDLIQ 193 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a----~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i-~~~~l~w~~~~~~~~~~ 193 (281)
.+++++||=.|+ +|.+|..++ ..|.+|++++. ++.++.+.. . .+ .+...|..+.....+
T Consensus 18 ~l~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~--------~~~~~~~~Dl~~~~~~~~-- 82 (236)
T 3e8x_A 18 YFQGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R--------GASDIVVANLEEDFSHAF-- 82 (236)
T ss_dssp ---CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T--------TCSEEEECCTTSCCGGGG--
T ss_pred CcCCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C--------CCceEEEcccHHHHHHHH--
Confidence 478999999995 566666554 36899999999 555433221 1 24 556666542111112
Q ss_pred CCCcEEEEccccCCCC
Q 023543 194 PLPDYVLGSDVIYSEG 209 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~ 209 (281)
..+|+|+.+-......
T Consensus 83 ~~~D~vi~~ag~~~~~ 98 (236)
T 3e8x_A 83 ASIDAVVFAAGSGPHT 98 (236)
T ss_dssp TTCSEEEECCCCCTTS
T ss_pred cCCCEEEECCCCCCCC
Confidence 4689999876655433
No 383
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=77.56 E-value=11 Score=32.93 Aligned_cols=88 Identities=17% Similarity=0.152 Sum_probs=49.4
Q ss_pred CeEEEECCCcCHHHHH---HHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-CCC---cC-C
Q 023543 124 KKIVELGSGCGLVGCI---AAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-DQD---LI-Q 193 (281)
Q Consensus 124 ~~VLELGcGtG~~~i~---~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~~~---~~-~ 193 (281)
++||=. .|+|.+|++ +++ .|++|+++|. ++.++.+++ .+.. ..++..+.. ... .. .
T Consensus 166 ~~vli~-gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~---------~~~~~~~~~~~~~v~~~~~~ 231 (349)
T 3pi7_A 166 KAFVMT-AGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD----IGAA---------HVLNEKAPDFEATLREVMKA 231 (349)
T ss_dssp SEEEES-STTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH----HTCS---------EEEETTSTTHHHHHHHHHHH
T ss_pred CEEEEe-CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCC---------EEEECCcHHHHHHHHHHhcC
Confidence 566643 344544544 343 6999999998 666777653 2322 122322110 000 01 1
Q ss_pred CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 194 PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
..+|+|+-+--. + .+....++++++|++++..
T Consensus 232 ~g~D~vid~~g~------~-~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 232 EQPRIFLDAVTG------P-LASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp HCCCEEEESSCH------H-HHHHHHHHSCTTCEEEECC
T ss_pred CCCcEEEECCCC------h-hHHHHHhhhcCCCEEEEEe
Confidence 368988864331 2 3366778899999987765
No 384
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=77.01 E-value=4.4 Score=36.58 Aligned_cols=103 Identities=17% Similarity=0.165 Sum_probs=62.5
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCCEEEEE-echhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCcEEE
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGAQVILT-DLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYVL 200 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~~V~~t-D~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD~Ii 200 (281)
.+.+||.++-+.|.+++.++ .+.+|+.+ |---.... ++.|+.. .. ....|. .....||+|+
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~-~~~~~~~~~~~~~~~~~----l~~~~~~------~~-~~~~~~------~~~~~~d~v~ 106 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLE-GRMAVERLETSRAAFRC----LTASGLQ------AR-LALPWE------AAAGAYDLVV 106 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGB-TTBEEEEEECBHHHHHH----HHHTTCC------CE-ECCGGG------SCTTCEEEEE
T ss_pred hCCcEEEecCCCCccccccC-CCCceEEEeCcHHHHHH----HHHcCCC------cc-ccCCcc------CCcCCCCEEE
Confidence 34699999999997666653 24566554 44112111 6677765 11 111221 1235688776
Q ss_pred EccccCCC-----CcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHHh
Q 023543 201 GSDVIYSE-----GAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAAM 248 (281)
Q Consensus 201 a~d~iy~~-----~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~~ 248 (281)
. |.+ ...+.++..+...|++||.++++...+.. ++.+...+.
T Consensus 107 ~----~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~g--~~~~~~~~~ 153 (381)
T 3dmg_A 107 L----ALPAGRGTAYVQASLVAAARALRMGGRLYLAGDKNKG--FERYFKEAR 153 (381)
T ss_dssp E----ECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEEGGGT--HHHHHHHHH
T ss_pred E----ECCcchhHHHHHHHHHHHHHhCCCCCEEEEEEccHHH--HHHHHHHHH
Confidence 3 333 23577888888999999999998876542 445555554
No 385
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=76.47 E-value=8.6 Score=33.02 Aligned_cols=81 Identities=23% Similarity=0.177 Sum_probs=47.8
Q ss_pred cCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc--
Q 023543 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-- 191 (281)
+++++||=.|++.| +|.. +++.|++|+++|. ++.++.+...+...+.. ..++.+...|..+.... .+
T Consensus 24 l~~k~vlVTGas~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~ 99 (297)
T 1xhl_A 24 FSGKSVIITGSSNG-IGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP---AEKINAVVADVTEASGQDDIINT 99 (297)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---GGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC---CceEEEEecCCCCHHHHHHHHHH
Confidence 57889999997655 4544 4457999999999 56565555555443210 01466666665432110 00
Q ss_pred ---CCCCCcEEEEcccc
Q 023543 192 ---IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 ---~~~~fD~Iia~d~i 205 (281)
.-.++|++|.+--+
T Consensus 100 ~~~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCc
Confidence 01368999986544
No 386
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=76.09 E-value=9.6 Score=31.77 Aligned_cols=82 Identities=20% Similarity=0.210 Sum_probs=51.8
Q ss_pred ccCCCeEEEECC-CcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc-
Q 023543 120 LLHGKKIVELGS-GCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL- 191 (281)
Q Consensus 120 ~~~~~~VLELGc-GtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~- 191 (281)
.+++++||=.|+ |.|+ ++..+++.|++|+++|. .+.++.+.+.+..... .++.+...|..+.... .+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dl~~~~~v~~~~~ 93 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGL-----GRVEAVVCDVTSTEAVDALIT 93 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCS-----SCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC-----CceEEEEeCCCCHHHHHHHHH
Confidence 367899999998 6664 33445567999999999 6666666555544321 3677777765432210 00
Q ss_pred ----CCCCCcEEEEccccC
Q 023543 192 ----IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ----~~~~fD~Iia~d~iy 206 (281)
..+++|++|.+.-+.
T Consensus 94 ~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 94 QTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp HHHHHHSCCCEEEECCCCC
T ss_pred HHHHHhCCCcEEEECCCcC
Confidence 014789999866554
No 387
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=76.07 E-value=5.7 Score=33.59 Aligned_cols=23 Identities=9% Similarity=0.200 Sum_probs=18.8
Q ss_pred cHHHHHHHHHHhhCCCcEEEEEE
Q 023543 210 AVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 210 ~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.+...+..+.++|+++|.+++..
T Consensus 52 ~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 52 FTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCeEEEEEc
Confidence 45677888889999999988774
No 388
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=76.01 E-value=7.9 Score=32.79 Aligned_cols=105 Identities=21% Similarity=0.167 Sum_probs=58.4
Q ss_pred cCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hh-HHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc-
Q 023543 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PD-RLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~-~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~- 191 (281)
++++++|=.|++.| +|.. +++.|++|++++. ++ ..+.+.+.+...+ .++.+...|..+.... .+
T Consensus 27 ~~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~ 99 (283)
T 1g0o_A 27 LEGKVALVTGAGRG-IGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG------SDAACVKANVGVVEDIVRMFE 99 (283)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC------CCeEEEEcCCCCHHHHHHHHH
Confidence 57899999997655 4544 3457999999988 43 3444444444332 2466666554332110 00
Q ss_pred ----CCCCCcEEEEccccCCCC--------cH-----------HHHHHHHHHhhCCCcEEEEEE
Q 023543 192 ----IQPLPDYVLGSDVIYSEG--------AV-----------GDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ----~~~~fD~Iia~d~iy~~~--------~~-----------~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.-.++|++|.+.-+.... .+ -.+++.+...++.+|.+++..
T Consensus 100 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 100 EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 014689999866544321 11 224455556666667766543
No 389
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=75.17 E-value=3.4 Score=36.61 Aligned_cols=39 Identities=23% Similarity=0.221 Sum_probs=28.8
Q ss_pred CCCeEEEECCCc-CHHHHHHHH-cCCEEEEEec-hhHHHHHH
Q 023543 122 HGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLK 160 (281)
Q Consensus 122 ~~~~VLELGcGt-G~~~i~~a~-~g~~V~~tD~-~~~l~~~~ 160 (281)
+|.+||=+|+|. |..++.+|+ .|++|+++|. ++.++.++
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~ 221 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEAL 221 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence 788999999764 555555554 6899999999 66665554
No 390
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=75.02 E-value=11 Score=31.56 Aligned_cols=80 Identities=21% Similarity=0.118 Sum_probs=50.0
Q ss_pred ccCCCeEEEECCCc--CH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC---
Q 023543 120 LLHGKKIVELGSGC--GL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD--- 190 (281)
Q Consensus 120 ~~~~~~VLELGcGt--G~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~--- 190 (281)
.++||++|=-|+++ |+ ++..+++.|++|+++|. ++.++.+.+-++..+- .++.+...|..+..+..
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~ 77 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ-----PEAHLYQIDVQSDEEVINGF 77 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC-----SSCEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----CcEEEEEccCCCHHHHHHHH
Confidence 47899999999643 52 45556678999999999 6667766655554332 24666666654321100
Q ss_pred ----cCCCCCcEEEEccc
Q 023543 191 ----LIQPLPDYVLGSDV 204 (281)
Q Consensus 191 ----~~~~~fD~Iia~d~ 204 (281)
-.-.+.|+++.+--
T Consensus 78 ~~~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 78 EQIGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHHCCCSEEEECCC
T ss_pred HHHHHHhCCCCEEEeccc
Confidence 01156898887543
No 391
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=74.85 E-value=10 Score=31.60 Aligned_cols=88 Identities=17% Similarity=0.191 Sum_probs=49.4
Q ss_pred cCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc--
Q 023543 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-- 191 (281)
..+++||=.|++.| +|.. ++..|++|+++|. ++.++.+...+..... ..++.+...|..+.... .+
T Consensus 5 ~~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~D~~~~~~v~~~~~~ 79 (267)
T 2gdz_A 5 VNGKVALVTGAAQG-IGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE----PQKTLFIQCDVADQQQLRDTFRK 79 (267)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC----GGGEEEEECCTTSHHHHHHHHHH
T ss_pred cCCCEEEEECCCCc-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcC----CCceEEEecCCCCHHHHHHHHHH
Confidence 46889999997654 4544 4457999999998 5555444333322100 12466666665432110 00
Q ss_pred ---CCCCCcEEEEccccCCCCcHHH
Q 023543 192 ---IQPLPDYVLGSDVIYSEGAVGD 213 (281)
Q Consensus 192 ---~~~~fD~Iia~d~iy~~~~~~~ 213 (281)
.-+++|+++.+--+.....++.
T Consensus 80 ~~~~~g~id~lv~~Ag~~~~~~~~~ 104 (267)
T 2gdz_A 80 VVDHFGRLDILVNNAGVNNEKNWEK 104 (267)
T ss_dssp HHHHHSCCCEEEECCCCCCSSSHHH
T ss_pred HHHHcCCCCEEEECCCCCChhhHHH
Confidence 0146899998766655544443
No 392
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=74.83 E-value=6.6 Score=33.18 Aligned_cols=80 Identities=18% Similarity=0.140 Sum_probs=46.4
Q ss_pred cCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec--hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-Cc---
Q 023543 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL--PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DL--- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~--~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~--- 191 (281)
.+++++|=-|++.|+ ++..+++.|++|++++. .+.++.+...+...+ .++.+...|..+.... .+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~ 98 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG------GKALTAQADVSDPAAVRRLFAT 98 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------CeEEEEEcCCCCHHHHHHHHHH
Confidence 568999999987763 33345567999988865 344555555554432 3566666665432110 00
Q ss_pred ---CCCCCcEEEEccccC
Q 023543 192 ---IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ---~~~~fD~Iia~d~iy 206 (281)
.-++.|++|.+--+.
T Consensus 99 ~~~~~g~iD~lvnnAG~~ 116 (267)
T 3u5t_A 99 AEEAFGGVDVLVNNAGIM 116 (267)
T ss_dssp HHHHHSCEEEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 014689998866544
No 393
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=74.74 E-value=3.3 Score=37.12 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=30.6
Q ss_pred cCCCeEEEECCCcCHHHHHHH---H-cCCEEEEEec-hhHHHHHHH
Q 023543 121 LHGKKIVELGSGCGLVGCIAA---L-LGAQVILTDL-PDRLRLLKK 161 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a---~-~g~~V~~tD~-~~~l~~~~~ 161 (281)
.+|.+||=+|+|+|.+|+++. + .|++|+++|. ++.++.+++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 214 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA 214 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh
Confidence 468899999777776665544 3 6899999998 666777663
No 394
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=74.67 E-value=14 Score=30.94 Aligned_cols=80 Identities=24% Similarity=0.245 Sum_probs=51.7
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC--c--
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD--L-- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~--~-- 191 (281)
.++++++|=-|++.|+ ++..+++.|++|+++|. .+.++.+.+.+...+ .++.+...|..+..... +
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG------RRALSVGTDITDDAQVAHLVDE 81 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHH
Confidence 3688999999988774 33445567999999999 666666666555443 35667776654422100 0
Q ss_pred ---CCCCCcEEEEcccc
Q 023543 192 ---IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 ---~~~~fD~Iia~d~i 205 (281)
..++.|+++.+--+
T Consensus 82 ~~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 82 TMKAYGRVDVVINNAFR 98 (264)
T ss_dssp HHHHTSCCSEEEECCCS
T ss_pred HHHHcCCCcEEEECCCC
Confidence 12478999986643
No 395
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=74.62 E-value=2.9 Score=36.25 Aligned_cols=87 Identities=13% Similarity=0.048 Sum_probs=51.5
Q ss_pred ccCCCeEEEECCCc-CHHHHHHHH-cCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a~-~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
..+|.+||=+|+|. |..++.+|+ .|++|+++|.++.++.+++ .+.. .+. + + ...+ ...+|
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~----lGa~-------~v~--~--d--~~~v-~~g~D 201 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSASLSQALAAK----RGVR-------HLY--R--E--PSQV-TQKYF 201 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCHHHHHH----HTEE-------EEE--S--S--GGGC-CSCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEChhhHHHHHH----cCCC-------EEE--c--C--HHHh-CCCcc
Confidence 45789999999964 666666665 7999999995445666653 3322 111 1 2 1222 56789
Q ss_pred EEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 023543 198 YVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 198 ~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
+|+-+ .-. +.+ ....++++++|++++.
T Consensus 202 vv~d~--~g~----~~~-~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 202 AIFDA--VNS----QNA-AALVPSLKANGHIICI 228 (315)
T ss_dssp EEECC--------------TTGGGEEEEEEEEEE
T ss_pred EEEEC--CCc----hhH-HHHHHHhcCCCEEEEE
Confidence 77743 211 122 4456788899987665
No 396
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=74.30 E-value=4.3 Score=35.68 Aligned_cols=93 Identities=19% Similarity=0.238 Sum_probs=55.8
Q ss_pred ccCCCeEEEECC--CcCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-CC---Cc
Q 023543 120 LLHGKKIVELGS--GCGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-DQ---DL 191 (281)
Q Consensus 120 ~~~~~~VLELGc--GtG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~~---~~ 191 (281)
..++++||-.|+ |.|...+.+++ .|++|+++|. ++.++.+++ .+.. ..++..+.. .. ..
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~ga~---------~~~d~~~~~~~~~~~~~ 230 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA----LGAD---------ETVNYTHPDWPKEVRRL 230 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCS---------EEEETTSTTHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCC---------EEEcCCcccHHHHHHHH
Confidence 346889999998 34666555554 7899999999 666776653 2322 113332211 00 01
Q ss_pred C-CCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 I-QPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ~-~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
. ..++|+|+.+-- .. .++...++++++|++++..
T Consensus 231 ~~~~~~d~vi~~~g---~~----~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 231 TGGKGADKVVDHTG---AL----YFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp TTTTCEEEEEESSC---SS----SHHHHHHHEEEEEEEEESS
T ss_pred hCCCCceEEEECCC---HH----HHHHHHHhhccCCEEEEEe
Confidence 1 247898886543 22 3556667788888876553
No 397
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=74.28 E-value=3.5 Score=35.91 Aligned_cols=93 Identities=19% Similarity=0.126 Sum_probs=55.3
Q ss_pred ccCCCeEEEEC-CC-cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-----CC
Q 023543 120 LLHGKKIVELG-SG-CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-----QD 190 (281)
Q Consensus 120 ~~~~~~VLELG-cG-tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-----~~ 190 (281)
..+|++||=.| +| .|...+.+++ .|++|+++|. ++.++.+++ .+.. ..++..+... ..
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~---------~~~~~~~~~~~~~~~~~ 204 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA----LGAW---------ETIDYSHEDVAKRVLEL 204 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCS---------EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCC---------EEEeCCCccHHHHHHHH
Confidence 35789999999 34 3555555554 7999999998 666776653 2322 1122221100 00
Q ss_pred cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 ~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.....+|+|+-+--- ..+....++++++|++++..
T Consensus 205 ~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 205 TDGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp TTTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECC
T ss_pred hCCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEe
Confidence 112468988864331 34556667888999877664
No 398
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=74.28 E-value=7 Score=35.51 Aligned_cols=59 Identities=20% Similarity=0.254 Sum_probs=34.9
Q ss_pred HHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHHH---------cCCEEEEEechhHHHHHHHH
Q 023543 103 GVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAAL---------LGAQVILTDLPDRLRLLKKN 162 (281)
Q Consensus 103 s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a~---------~g~~V~~tD~~~~l~~~~~N 162 (281)
+.+++.|+........ ....-+|+|+|+|.|.+..-+.+ ...+++++|.+..+...|++
T Consensus 62 Ge~la~~~~~~w~~~g-~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~ 129 (387)
T 1zkd_A 62 GELLGLWSASVWKAAD-EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQT 129 (387)
T ss_dssp HHHHHHHHHHHHHHTT-CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC-CCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHH
Confidence 4566777665322110 11233799999999977653321 11279999996665555543
No 399
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=74.19 E-value=3.6 Score=35.92 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=54.5
Q ss_pred ccCCCeEEEECCC--cCHHHHHHH-HcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-----C
Q 023543 120 LLHGKKIVELGSG--CGLVGCIAA-LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-----D 190 (281)
Q Consensus 120 ~~~~~~VLELGcG--tG~~~i~~a-~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-----~ 190 (281)
..+|++||-.||+ .|...+.++ ..|++|+++|. ++.++.+++ .+.. ..++..+..+. .
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~~---------~~~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IGFD---------AAFNYKTVNSLEEALKK 209 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---------EEEETTSCSCHHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCc---------EEEecCCHHHHHHHHHH
Confidence 3578999999983 344444333 37899999998 666665532 2221 12233221110 0
Q ss_pred cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 ~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.....+|+++.+-- ...++...++++++|++++..
T Consensus 210 ~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 210 ASPDGYDCYFDNVG-------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECC
T ss_pred HhCCCCeEEEECCC-------hHHHHHHHHHHhcCCEEEEEe
Confidence 11246898886543 134666778889999877654
No 400
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=74.14 E-value=3.6 Score=35.96 Aligned_cols=93 Identities=15% Similarity=0.089 Sum_probs=55.0
Q ss_pred ccCCCeEEEECC-C-cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-C----C
Q 023543 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-Q----D 190 (281)
Q Consensus 120 ~~~~~~VLELGc-G-tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-~----~ 190 (281)
..+|++||=.|+ | .|...+.+++ .|++|+++|. ++.++.+++ .+.. ..++..+... . .
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---------~~~~~~~~~~~~~~~~~ 212 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE----YGAE---------YLINASKEDILRQVLKF 212 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---------EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCc---------EEEeCCCchHHHHHHHH
Confidence 457899999994 3 2555555554 7899999999 666766653 2322 1222221100 0 0
Q ss_pred cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 ~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.....+|+|+-+--- ..++...++++++|++++..
T Consensus 213 ~~~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 213 TNGKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp TTTSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECC
T ss_pred hCCCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEc
Confidence 113468988864331 34566677889999877653
No 401
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=73.75 E-value=7.3 Score=34.17 Aligned_cols=42 Identities=2% Similarity=-0.147 Sum_probs=30.3
Q ss_pred CCCCCcEEEEccccCCCC---------------cHHHHHHHHHHhhCCCcEEEEEEee
Q 023543 192 IQPLPDYVLGSDVIYSEG---------------AVGDLLDTLLQLCGTQTTIFLAGEL 234 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~~---------------~~~~ll~~l~~ll~~~g~~~l~~~~ 234 (281)
.+.+||+|+. |..|+.. .+..+++.+.++|+|+|.+++....
T Consensus 30 ~~~svDlI~t-DPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 30 PEESISLVMT-SPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp CSSCEEEEEE-CCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCCeeEEEE-CCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 3467887775 4445432 4678888899999999998887554
No 402
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=73.71 E-value=3.1 Score=41.19 Aligned_cols=40 Identities=25% Similarity=0.235 Sum_probs=32.3
Q ss_pred CeEEEECCCcCHHHHHHHHcC------CE-EEEEec-hhHHHHHHHHH
Q 023543 124 KKIVELGSGCGLVGCIAALLG------AQ-VILTDL-PDRLRLLKKNI 163 (281)
Q Consensus 124 ~~VLELGcGtG~~~i~~a~~g------~~-V~~tD~-~~~l~~~~~N~ 163 (281)
.+||||-||+|-+++.+.+.| .+ +.++|+ +.+++..+.|.
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 489999999998777766655 44 789999 78888888884
No 403
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=73.54 E-value=3.9 Score=36.02 Aligned_cols=93 Identities=18% Similarity=0.213 Sum_probs=55.1
Q ss_pred ccCCCeEEEECC-C-cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC---CcC
Q 023543 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ---DLI 192 (281)
Q Consensus 120 ~~~~~~VLELGc-G-tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~---~~~ 192 (281)
..+|++||=.|+ | .|...+.+++ .|++|+++|. ++.++.+++ .+.. .+. +....... ...
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~-------~v~--~~~~~~~~~v~~~~ 223 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----VGAD-------IVL--PLEEGWAKAVREAT 223 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCS-------EEE--ESSTTHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCc-------EEe--cCchhHHHHHHHHh
Confidence 357899999997 3 3666555554 7999999999 666776664 2322 112 21111000 011
Q ss_pred -CCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 193 -QPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 193 -~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
...+|+|+-+--. ..+....++++++|++++..
T Consensus 224 ~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 224 GGAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred CCCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 2368988864332 24566677889999877654
No 404
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=73.23 E-value=2.7 Score=36.23 Aligned_cols=90 Identities=20% Similarity=0.237 Sum_probs=53.0
Q ss_pred ccCCCeEEEECC-C-cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCC-C-CCCCcCC
Q 023543 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD-D-PDQDLIQ 193 (281)
Q Consensus 120 ~~~~~~VLELGc-G-tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~-~-~~~~~~~ 193 (281)
..+|++||-+|+ | .|...+.+++ .|++|+++|. ++.++.+++ .+.. ..++..+ . ....+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---------~~~~~~~~~~~~~~~-- 187 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGAE---------EAATYAEVPERAKAW-- 187 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTCS---------EEEEGGGHHHHHHHT--
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCC---------EEEECCcchhHHHHh--
Confidence 357899999997 3 3555555554 7899999999 666666643 2222 1122211 0 00011
Q ss_pred CCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 194 PLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 194 ~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
..+|+|+. +- . ..++...++++++|++++..
T Consensus 188 ~~~d~vid--~g-~-----~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 188 GGLDLVLE--VR-G-----KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp TSEEEEEE--CS-C-----TTHHHHHTTEEEEEEEEEC-
T ss_pred cCceEEEE--CC-H-----HHHHHHHHhhccCCEEEEEe
Confidence 46888875 21 1 24566677888888876543
No 405
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=73.01 E-value=4.7 Score=41.26 Aligned_cols=41 Identities=15% Similarity=0.184 Sum_probs=34.1
Q ss_pred CCeEEEECCCcCHHHHHHHHcCC-E-EEEEec-hhHHHHHHHHH
Q 023543 123 GKKIVELGSGCGLVGCIAALLGA-Q-VILTDL-PDRLRLLKKNI 163 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~~g~-~-V~~tD~-~~~l~~~~~N~ 163 (281)
.-++|||-||+|-+++.+.+.|. + |.++|+ +.+.+..+.|.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~ 583 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN 583 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC
Confidence 34899999999998888888897 5 789999 77877777663
No 406
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=72.62 E-value=42 Score=28.19 Aligned_cols=78 Identities=13% Similarity=0.149 Sum_probs=46.2
Q ss_pred cCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-h-hHHHHHHHHHH-HhhcCCCCCCceEEEEEecCC----CCCC
Q 023543 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-P-DRLRLLKKNIE-NNLRHGDLRGSAVVTELTWGD----DPDQ 189 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~-~~l~~~~~N~~-~n~~~~~~~~~i~~~~l~w~~----~~~~ 189 (281)
++++++|=.|++.| +|.. +++.|++|+++|. + +.++.+...+. ..+ .++.+...|..+ ....
T Consensus 21 l~~k~~lVTGas~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~------~~~~~~~~Dv~~~~~~~~~v 93 (288)
T 2x9g_A 21 MEAPAAVVTGAAKR-IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS------NTAVVCQADLTNSNVLPASC 93 (288)
T ss_dssp -CCCEEEETTCSSH-HHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST------TCEEEEECCCSCSTTHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC------CceEEEEeecCCccCCHHHH
Confidence 67899999997765 3443 4457999999998 5 55555544443 211 356667766544 1100
Q ss_pred -Cc------CCCCCcEEEEcccc
Q 023543 190 -DL------IQPLPDYVLGSDVI 205 (281)
Q Consensus 190 -~~------~~~~fD~Iia~d~i 205 (281)
.+ ...++|++|.+--+
T Consensus 94 ~~~~~~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 94 EEIINSCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCC
Confidence 00 01368999986544
No 407
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=72.56 E-value=13 Score=30.92 Aligned_cols=81 Identities=19% Similarity=0.177 Sum_probs=50.4
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc--
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-- 191 (281)
.++++++|=-|++.|+ ++..+++.|++|+++|. .+.++.+...+...+ .++.+...|..+.... .+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~ 82 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG------GKAIGLECNVTDEQHREAVIKA 82 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHH
Confidence 4789999999987663 23344557999999999 666666655555433 3566666665432110 00
Q ss_pred ---CCCCCcEEEEccccC
Q 023543 192 ---IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ---~~~~fD~Iia~d~iy 206 (281)
.-++.|+++.+--+.
T Consensus 83 ~~~~~g~id~lv~nAg~~ 100 (256)
T 3gaf_A 83 ALDQFGKITVLVNNAGGG 100 (256)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 014689999865543
No 408
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=72.46 E-value=14 Score=31.99 Aligned_cols=83 Identities=11% Similarity=0.058 Sum_probs=51.7
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc--
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-- 191 (281)
.+.+++||=-|++.|+ ++..++..|++|++++. ++.++.+...+...+.. .++.+...|..+.... .+
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~ 80 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSG----PEVMGVQLDVASREGFKMAADE 80 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC----CeEEEEECCCCCHHHHHHHHHH
Confidence 3578999999988764 22334457999999999 66676666666554321 2566777665432110 00
Q ss_pred ---CCCCCcEEEEccccC
Q 023543 192 ---IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ---~~~~fD~Iia~d~iy 206 (281)
..+++|+++.+.-+.
T Consensus 81 ~~~~~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 81 VEARFGPVSILCNNAGVN 98 (319)
T ss_dssp HHHHTCCEEEEEECCCCC
T ss_pred HHHhCCCCCEEEECCCcC
Confidence 114679999866543
No 409
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=72.15 E-value=12 Score=34.72 Aligned_cols=99 Identities=16% Similarity=0.126 Sum_probs=57.4
Q ss_pred CCCeEEEECCCc-C-HHHHHHHHcCCEEEEEec-hhHHHHHHHHH------------HHhhcCCCCCCceEEEEEecCCC
Q 023543 122 HGKKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKNI------------ENNLRHGDLRGSAVVTELTWGDD 186 (281)
Q Consensus 122 ~~~~VLELGcGt-G-~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~------------~~n~~~~~~~~~i~~~~l~w~~~ 186 (281)
...+|.=+|+|. | .++..+++.|.+|++.|. ++.++.+++.. ..+... .++.+.. +
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~----~~l~~tt-----d 77 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSA----GRLRFST-----D 77 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHT----TCEEEEC-----C
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhccc----CCEEEEC-----C
Confidence 456888899885 5 346667778999999999 66676665431 110000 1222211 1
Q ss_pred CCCCcCCCCCcEEEEcccc-------CCCCcHHHHHHHHHHhhCCCcEEEEE
Q 023543 187 PDQDLIQPLPDYVLGSDVI-------YSEGAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 187 ~~~~~~~~~fD~Iia~d~i-------y~~~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
.... -...|+|+.+=.. .+...+..+++.+...++++..++..
T Consensus 78 ~~~a--~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ 127 (478)
T 2y0c_A 78 IEAA--VAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDK 127 (478)
T ss_dssp HHHH--HHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred HHHH--hhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 0000 0246887765322 11255788888888899988766443
No 410
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=72.11 E-value=9 Score=31.25 Aligned_cols=78 Identities=18% Similarity=0.105 Sum_probs=46.4
Q ss_pred CCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-CcC----
Q 023543 123 GKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DLI---- 192 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~~---- 192 (281)
+++||=.|++.| +|.. +++.|++|++++. .+.++.+.+.+....- .++.+...|..+.... .+.
T Consensus 2 ~k~vlITGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~ 75 (235)
T 3l77_A 2 MKVAVITGASRG-IGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-----VEVFYHHLDVSKAESVEEFSKKVL 75 (235)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-----CCEEEEECCTTCHHHHHHHCC-HH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-----CeEEEEEeccCCHHHHHHHHHHHH
Confidence 678888897655 4444 4457999999999 5666655555442211 3566677665432110 001
Q ss_pred --CCCCcEEEEccccC
Q 023543 193 --QPLPDYVLGSDVIY 206 (281)
Q Consensus 193 --~~~fD~Iia~d~iy 206 (281)
-+++|+++.+.-+.
T Consensus 76 ~~~g~id~li~~Ag~~ 91 (235)
T 3l77_A 76 ERFGDVDVVVANAGLG 91 (235)
T ss_dssp HHHSSCSEEEECCCCC
T ss_pred HhcCCCCEEEECCccc
Confidence 13689999866554
No 411
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=71.89 E-value=11 Score=31.41 Aligned_cols=80 Identities=15% Similarity=0.107 Sum_probs=50.6
Q ss_pred cCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC-c----
Q 023543 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-L---- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~-~---- 191 (281)
.++++||=-|++.|+ ++..++..|++|+++|. ++.++.+...+...+ .++.+...|..+..... +
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG------GRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT------CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CeEEEEECcCCCHHHHHHHHHHH
Confidence 578999999988763 23344557999999999 666666666665543 35666776654321100 0
Q ss_pred -CCCCCcEEEEccccC
Q 023543 192 -IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 -~~~~fD~Iia~d~iy 206 (281)
...++|+++.+.-+.
T Consensus 79 ~~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 79 DAHAPLEVTIFNVGAN 94 (252)
T ss_dssp HHHSCEEEEEECCCCC
T ss_pred HhhCCceEEEECCCcC
Confidence 014789998765553
No 412
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=71.85 E-value=4.2 Score=36.09 Aligned_cols=89 Identities=13% Similarity=0.190 Sum_probs=52.2
Q ss_pred CCeEEEECCCc-CHHHHHHHH-cCCEEEEEec-h---hHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCc--CCC
Q 023543 123 GKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-P---DRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL--IQP 194 (281)
Q Consensus 123 ~~~VLELGcGt-G~~~i~~a~-~g~~V~~tD~-~---~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~--~~~ 194 (281)
|++||=+|+|. |...+.+++ .|++|+++|. + +.++.+++ .+.. .+ + .+.....+ ...
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~----~ga~-------~v---~-~~~~~~~~~~~~~ 245 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE----TKTN-------YY---N-SSNGYDKLKDSVG 245 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH----HTCE-------EE---E-CTTCSHHHHHHHC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH----hCCc-------ee---c-hHHHHHHHHHhCC
Confidence 89999999843 444444443 6899999999 5 56665543 2221 11 2 22111111 124
Q ss_pred CCcEEEEccccCCCCcHHHHH-HHHHHhhCCCcEEEEEE
Q 023543 195 LPDYVLGSDVIYSEGAVGDLL-DTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 195 ~fD~Iia~d~iy~~~~~~~ll-~~l~~ll~~~g~~~l~~ 232 (281)
++|+|+.+--. ...+ +...++++++|.+++..
T Consensus 246 ~~d~vid~~g~------~~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 246 KFDVIIDATGA------DVNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp CEEEEEECCCC------CTHHHHHHGGGEEEEEEEEECS
T ss_pred CCCEEEECCCC------hHHHHHHHHHHHhcCCEEEEEe
Confidence 68988865432 2244 66677888988876553
No 413
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=71.77 E-value=27 Score=32.06 Aligned_cols=41 Identities=29% Similarity=0.488 Sum_probs=28.0
Q ss_pred cCCCeEEEECCCc-CH-HHHHHHHcCCEEEEEec-hhHHHHHHH
Q 023543 121 LHGKKIVELGSGC-GL-VGCIAALLGAQVILTDL-PDRLRLLKK 161 (281)
Q Consensus 121 ~~~~~VLELGcGt-G~-~~i~~a~~g~~V~~tD~-~~~l~~~~~ 161 (281)
..|.+.-=+|+|. |+ .+..+++.|.+|++.|+ ++.++.+++
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~ 52 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQN 52 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHC
Confidence 3566667788775 54 35667778999999999 776766553
No 414
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=70.98 E-value=19 Score=30.11 Aligned_cols=83 Identities=13% Similarity=0.048 Sum_probs=50.3
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-C-c--
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-D-L-- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~-~-- 191 (281)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+.+.+....-. .++.+...|..+.... . +
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~ 80 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPG----ARLFASVCDVLDALQVRAFAEA 80 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC----ceEEEEeCCCCCHHHHHHHHHH
Confidence 4689999999987763 23344557999999999 66666665555442111 2466666665432110 0 0
Q ss_pred ---CCCCCcEEEEccccC
Q 023543 192 ---IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ---~~~~fD~Iia~d~iy 206 (281)
.-++.|+++.+.-+.
T Consensus 81 ~~~~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 81 CERTLGCASILVNNAGQG 98 (265)
T ss_dssp HHHHHCSCSEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 014689999865543
No 415
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=70.79 E-value=53 Score=29.27 Aligned_cols=83 Identities=10% Similarity=0.003 Sum_probs=47.6
Q ss_pred cCCCeEEEECCCcCHHHHHHHH----cCCEEEEEec-hh---HHHHHHHHHHHhhc---CCCCCCceEEEEEecCCCCCC
Q 023543 121 LHGKKIVELGSGCGLVGCIAAL----LGAQVILTDL-PD---RLRLLKKNIENNLR---HGDLRGSAVVTELTWGDDPDQ 189 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a~----~g~~V~~tD~-~~---~l~~~~~N~~~n~~---~~~~~~~i~~~~l~w~~~~~~ 189 (281)
..+++||=.|+ +|.+|..+++ .|.+|++++. +. .++.+..++..... ......++.+...|..+....
T Consensus 67 ~~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 67 RPLGNTLLTGA-TGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCEEEEEECT-TSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCEEEEecC-CcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 45678999994 6777776654 4678999988 44 44444444433200 000013577788777653332
Q ss_pred CcCCCCCcEEEEcccc
Q 023543 190 DLIQPLPDYVLGSDVI 205 (281)
Q Consensus 190 ~~~~~~fD~Iia~d~i 205 (281)
. ....+|+|+.+...
T Consensus 146 ~-~~~~~d~Vih~A~~ 160 (427)
T 4f6c_A 146 V-LPENMDTIIHAGAR 160 (427)
T ss_dssp C-CSSCCSEEEECCCC
T ss_pred C-CcCCCCEEEECCcc
Confidence 2 34678999976543
No 416
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=70.78 E-value=23 Score=32.58 Aligned_cols=99 Identities=20% Similarity=0.199 Sum_probs=54.1
Q ss_pred CeEEEECCCc-C-HHHHHHHHcCCEEEEEec-hhHHHHHHHH------------HHHhhcCCCCCCceEEEEEecCCCCC
Q 023543 124 KKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKN------------IENNLRHGDLRGSAVVTELTWGDDPD 188 (281)
Q Consensus 124 ~~VLELGcGt-G-~~~i~~a~~g~~V~~tD~-~~~l~~~~~N------------~~~n~~~~~~~~~i~~~~l~w~~~~~ 188 (281)
.+|.=+|+|. | .++..+++.|.+|++.|. ++.++.+++. +..+... .++.+.. ...
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~----~~l~~t~-----d~~ 73 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKA----GRLRFGT-----EIE 73 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHT----TSEEEES-----CHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhccc----CcEEEEC-----CHH
Confidence 3666778764 3 334455667899999999 6666655431 1110000 1232211 111
Q ss_pred CCcCCCCCcEEEEccccC-------CCCcHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 189 QDLIQPLPDYVLGSDVIY-------SEGAVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 189 ~~~~~~~fD~Iia~d~iy-------~~~~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
.. -...|+|+.+=... +...+..+++.+...++++..++....
T Consensus 74 ea--~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST 123 (450)
T 3gg2_A 74 QA--VPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST 123 (450)
T ss_dssp HH--GGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred HH--HhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
Confidence 00 13468877653321 112578888888888888776655443
No 417
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=70.62 E-value=13 Score=30.40 Aligned_cols=82 Identities=24% Similarity=0.282 Sum_probs=50.0
Q ss_pred cccCCCeEEEECCCcCHHHH----HHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC---
Q 023543 119 LLLHGKKIVELGSGCGLVGC----IAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD--- 190 (281)
Q Consensus 119 ~~~~~~~VLELGcGtG~~~i----~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~--- 190 (281)
..+++++||=.|++.| +|. .++..|++|+++|. ++.++.+...+...+. ....+...+........
T Consensus 10 ~~l~~k~vlITGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~d~d~~~~~~~~~ 83 (247)
T 3i1j_A 10 ELLKGRVILVTGAARG-IGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQ-----PQPLIIALNLENATAQQYRE 83 (247)
T ss_dssp TTTTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTS-----CCCEEEECCTTTCCHHHHHH
T ss_pred ccCCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC-----CCceEEEeccccCCHHHHHH
Confidence 3578999999998655 344 34457999999999 6667666666655432 24555555542111100
Q ss_pred c------CCCCCcEEEEccccC
Q 023543 191 L------IQPLPDYVLGSDVIY 206 (281)
Q Consensus 191 ~------~~~~fD~Iia~d~iy 206 (281)
+ ..+++|++|.+.-+.
T Consensus 84 ~~~~~~~~~g~id~lv~nAg~~ 105 (247)
T 3i1j_A 84 LAARVEHEFGRLDGLLHNASII 105 (247)
T ss_dssp HHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHhCCCCCEEEECCccC
Confidence 0 013789999866553
No 418
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=70.31 E-value=4.1 Score=35.89 Aligned_cols=33 Identities=30% Similarity=0.407 Sum_probs=24.2
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCC-EEEEEech
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGA-QVILTDLP 153 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~-~V~~tD~~ 153 (281)
.+++++||=+|+| |. +...++..|+ +|+.++..
T Consensus 151 ~l~gk~~lVlGaG-G~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 151 DIIGKKMTICGAG-GAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp CCTTSEEEEECCS-HHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CccCCEEEEECCC-hHHHHHHHHHHHCCCCEEEEEECC
Confidence 4689999999997 42 3334556788 79888873
No 419
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=70.12 E-value=14 Score=31.60 Aligned_cols=80 Identities=21% Similarity=0.147 Sum_probs=45.6
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEech-h--HHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-C-c
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDLP-D--RLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-D-L 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~~-~--~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~-~ 191 (281)
.+++++||=-|++.|+ ++..+++.|++|+++|.. . ..+.+...++..+ .++.+...|..+.... . +
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~ 119 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG------RKAVLLPGDLSDESFARSLV 119 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT------CCEEECCCCTTSHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC------CcEEEEEecCCCHHHHHHHH
Confidence 3688999999977653 233445579999999983 3 2444444444332 2455555554321110 0 0
Q ss_pred -----CCCCCcEEEEcccc
Q 023543 192 -----IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 -----~~~~fD~Iia~d~i 205 (281)
...++|+++.+.-+
T Consensus 120 ~~~~~~~g~iD~lv~nAg~ 138 (294)
T 3r3s_A 120 HKAREALGGLDILALVAGK 138 (294)
T ss_dssp HHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 01478999976554
No 420
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=70.00 E-value=12 Score=34.58 Aligned_cols=112 Identities=18% Similarity=0.184 Sum_probs=59.5
Q ss_pred CeEEEECCCc-CH-HHHHHHHcCCEEEEEec-hhHHHHHHHH------------HHHhhcCCCCCCceEEEEEecCCCCC
Q 023543 124 KKIVELGSGC-GL-VGCIAALLGAQVILTDL-PDRLRLLKKN------------IENNLRHGDLRGSAVVTELTWGDDPD 188 (281)
Q Consensus 124 ~~VLELGcGt-G~-~~i~~a~~g~~V~~tD~-~~~l~~~~~N------------~~~n~~~~~~~~~i~~~~l~w~~~~~ 188 (281)
-++-=+|+|. |+ ++..+++.|.+|++.|. ++.++.+++. ++.+-.. +++.+.. +..
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~----g~l~~tt-----d~~ 79 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKA----GRLSFTT-----DLA 79 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHT----TCEEEES-----CHH
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhccc----CCEEEEC-----CHH
Confidence 4666777774 43 34556678999999999 6666655432 0000000 1222211 110
Q ss_pred CCcCCCCCcEEEEcc--cc---CC---CCcHHHHHHHHHHhhCCCcEEEEEEeeeChhHHHHHHHHH
Q 023543 189 QDLIQPLPDYVLGSD--VI---YS---EGAVGDLLDTLLQLCGTQTTIFLAGELRNDSVLEYFLEAA 247 (281)
Q Consensus 189 ~~~~~~~fD~Iia~d--~i---y~---~~~~~~ll~~l~~ll~~~g~~~l~~~~r~~~~~~~fl~~~ 247 (281)
... ...|+|+.+= .. .. ...+...++.+...++++..++.... -.+.+.+...+.+
T Consensus 80 ea~--~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~ST-v~pgtt~~l~~~l 143 (446)
T 4a7p_A 80 EGV--KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKST-VPVGTGDEVERII 143 (446)
T ss_dssp HHH--TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSC-CCTTHHHHHHHHH
T ss_pred HHH--hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCC-CCchHHHHHHHHH
Confidence 001 3468887762 21 11 12477788888888888887665543 3334434444433
No 421
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=69.72 E-value=23 Score=34.91 Aligned_cols=96 Identities=22% Similarity=0.308 Sum_probs=61.2
Q ss_pred CeEEEECCCc-C-HHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhh--------cCCC--CCCceEEEEEecCCCCCCC
Q 023543 124 KKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKNIENNL--------RHGD--LRGSAVVTELTWGDDPDQD 190 (281)
Q Consensus 124 ~~VLELGcGt-G-~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~--------~~~~--~~~~i~~~~l~w~~~~~~~ 190 (281)
++|-=||+|+ | -++..+|..|.+|++.|. ++.++.++..+..+- .... ...++.+. ...+ .
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~ 390 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFS-----SSTK-E 390 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEE-----SCGG-G
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhccc-----CcHH-H
Confidence 5899999997 3 455667778999999999 777777766554431 1100 00111111 1111 1
Q ss_pred cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEE
Q 023543 191 LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTI 228 (281)
Q Consensus 191 ~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~ 228 (281)
+ ...|+||-+ ++-+.+.-..+++.+..+++|++++
T Consensus 391 l--~~aDlVIEA-V~E~l~iK~~vf~~le~~~~~~aIl 425 (742)
T 3zwc_A 391 L--STVDLVVEA-VFEDMNLKKKVFAELSALCKPGAFL 425 (742)
T ss_dssp G--GSCSEEEEC-CCSCHHHHHHHHHHHHHHSCTTCEE
T ss_pred H--hhCCEEEEe-ccccHHHHHHHHHHHhhcCCCCceE
Confidence 1 346888865 4455677788999999999988754
No 422
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=69.49 E-value=3.9 Score=35.77 Aligned_cols=94 Identities=20% Similarity=0.219 Sum_probs=55.9
Q ss_pred ccCCCeEEEECCC--cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-C---Cc
Q 023543 120 LLHGKKIVELGSG--CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-Q---DL 191 (281)
Q Consensus 120 ~~~~~~VLELGcG--tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-~---~~ 191 (281)
..+|++||=.||+ .|...+.+++ .|++|+++|. ++.++.+.+ ..+.. ..++..+... . ..
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~~---------~~~~~~~~~~~~~~~~~ 214 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE---ELGFD---------GAIDYKNEDLAAGLKRE 214 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTCCS---------EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCCC---------EEEECCCHHHHHHHHHh
Confidence 4578999999983 3555555444 7899999998 666665522 22221 1123222100 0 01
Q ss_pred CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
....+|+|+.+-- ...+....++++++|++++..
T Consensus 215 ~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 215 CPKGIDVFFDNVG-------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp CTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECC
T ss_pred cCCCceEEEECCC-------cchHHHHHHHHhhCCEEEEEe
Confidence 2346898876433 236777778889999887654
No 423
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=69.25 E-value=17 Score=31.17 Aligned_cols=80 Identities=19% Similarity=0.157 Sum_probs=50.1
Q ss_pred cCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-Cc----
Q 023543 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DL---- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~---- 191 (281)
+++++||=.|++.|+ ++..+++.|++|+++|. .+.++.+.+.+...+ .++.+...|..+.... .+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG------FDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEEccCCCHHHHHHHHHHH
Confidence 688999999987653 22334457999999999 666666665555443 3566667665432110 00
Q ss_pred --CCCCCcEEEEccccC
Q 023543 192 --IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 --~~~~fD~Iia~d~iy 206 (281)
..+++|++|.+.-+.
T Consensus 103 ~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHSSCSEEEECCCCC
T ss_pred HHhCCCCCEEEECCCcC
Confidence 014789999865543
No 424
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=68.99 E-value=6 Score=33.79 Aligned_cols=132 Identities=11% Similarity=-0.025 Sum_probs=70.3
Q ss_pred CCeEEEECCCcCHHHHHHHHc-------C--CEEEEEec-hhH------------------------HHHHHHHH--HHh
Q 023543 123 GKKIVELGSGCGLVGCIAALL-------G--AQVILTDL-PDR------------------------LRLLKKNI--ENN 166 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~~-------g--~~V~~tD~-~~~------------------------l~~~~~N~--~~n 166 (281)
.+.|+|+|+-.|-..+.++.. + .+|++.|. ..+ .+.+++-+ ..|
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 459999999999877766542 2 36999993 211 01122211 112
Q ss_pred hcCCCC-CCceEEEEEecCCCCCCC---cCCCCCcEEEE-ccccCCCCcHHHHHHHHHHhhCCCcEEEEEEeee--ChhH
Q 023543 167 LRHGDL-RGSAVVTELTWGDDPDQD---LIQPLPDYVLG-SDVIYSEGAVGDLLDTLLQLCGTQTTIFLAGELR--NDSV 239 (281)
Q Consensus 167 ~~~~~~-~~~i~~~~l~w~~~~~~~---~~~~~fD~Iia-~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~~~r--~~~~ 239 (281)
...... ..++.+...+..+..+.. ....+||+|.. +|. | ......++.+..+++|||++++-.... -+..
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-Y--~~t~~~le~~~p~l~~GGvIv~DD~~~~~w~G~ 226 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-Y--EPTKAVLEAIRPYLTKGSIVAFDELDNPKWPGE 226 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-H--HHHHHHHHHHGGGEEEEEEEEESSTTCTTCTHH
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-c--chHHHHHHHHHHHhCCCcEEEEcCCCCCCChHH
Confidence 111111 256777774432211111 12346887664 342 1 234556777788899999987766421 2344
Q ss_pred HHHHHHHHh-cCCeEEEEe
Q 023543 240 LEYFLEAAM-KDFVIGRVE 257 (281)
Q Consensus 240 ~~~fl~~~~-~~f~v~~i~ 257 (281)
.+.+-+-+. .+.++.+++
T Consensus 227 ~~A~~ef~~~~~~~i~~~p 245 (257)
T 3tos_A 227 NIAMRKVLGLDHAPLRLLP 245 (257)
T ss_dssp HHHHHHHTCTTSSCCEECT
T ss_pred HHHHHHHHhhCCCeEEEcc
Confidence 444433333 366666665
No 425
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=68.98 E-value=16 Score=30.13 Aligned_cols=79 Identities=24% Similarity=0.324 Sum_probs=49.6
Q ss_pred ccCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-Cc--
Q 023543 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DL-- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~-- 191 (281)
.+++++||=.|++.| +|.. +++.|++|+++|. ++.++.+.+.+...+ .++.+...|..+..+. .+
T Consensus 6 ~~~~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~ 78 (253)
T 3qiv_A 6 RFENKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG------GTAISVAVDVSDPESAKAMAD 78 (253)
T ss_dssp TTTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CEEEEEECCTTSHHHHHHHHH
T ss_pred ccCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC------CcEEEEEccCCCHHHHHHHHH
Confidence 467899999997655 3444 4457999999999 666666665555432 3566666665432110 00
Q ss_pred ----CCCCCcEEEEcccc
Q 023543 192 ----IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 ----~~~~fD~Iia~d~i 205 (281)
..+++|+++.+.-+
T Consensus 79 ~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 79 RTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 01378999987655
No 426
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=68.84 E-value=16 Score=30.57 Aligned_cols=82 Identities=18% Similarity=0.222 Sum_probs=50.1
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC-c---
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-L--- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~-~--- 191 (281)
.+++++||=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+. .++.+...|..+..... +
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~ 81 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-----GKVIGVQTDVSDRAQCDALAGR 81 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS-----SCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-----CcEEEEEcCCCCHHHHHHHHHH
Confidence 4688999999977653 23344457999999999 6666655555544321 35666776654321100 0
Q ss_pred ---CCCCCcEEEEccccC
Q 023543 192 ---IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ---~~~~fD~Iia~d~iy 206 (281)
..+++|+++.+--+.
T Consensus 82 ~~~~~g~id~lvnnAg~~ 99 (262)
T 3pk0_A 82 AVEEFGGIDVVCANAGVF 99 (262)
T ss_dssp HHHHHSCCSEEEECCCCC
T ss_pred HHHHhCCCCEEEECCCCC
Confidence 013789999865544
No 427
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=68.73 E-value=27 Score=32.43 Aligned_cols=96 Identities=26% Similarity=0.357 Sum_probs=56.4
Q ss_pred CeEEEECCCc-C-HHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCC------------ceEEEEEecCCCCC
Q 023543 124 KKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRG------------SAVVTELTWGDDPD 188 (281)
Q Consensus 124 ~~VLELGcGt-G-~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~------------~i~~~~l~w~~~~~ 188 (281)
++|-=||+|. | -++..+++.|.+|++.|. ++.++.+++.+..+.......+ ++.+. ...+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-----~~~~ 80 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-----TDIH 80 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-----CCGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-----CCHH
Confidence 3566678875 3 345566678999999999 7778877766544422110011 12221 1111
Q ss_pred CCcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEE
Q 023543 189 QDLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTI 228 (281)
Q Consensus 189 ~~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~ 228 (281)
.+ ...|+||-+-. -+......+++.+...++++.++
T Consensus 81 -~~--~~aDlVIeAVp-e~~~vk~~v~~~l~~~~~~~~Il 116 (483)
T 3mog_A 81 -AL--AAADLVIEAAS-ERLEVKKALFAQLAEVCPPQTLL 116 (483)
T ss_dssp -GG--GGCSEEEECCC-CCHHHHHHHHHHHHHHSCTTCEE
T ss_pred -Hh--cCCCEEEEcCC-CcHHHHHHHHHHHHHhhccCcEE
Confidence 11 35688887632 11223467888888888888765
No 428
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=68.63 E-value=7 Score=27.75 Aligned_cols=69 Identities=17% Similarity=0.145 Sum_probs=38.6
Q ss_pred CCCeEEEECCCcCHHHHHHH----HcC-CEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCC
Q 023543 122 HGKKIVELGSGCGLVGCIAA----LLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a----~~g-~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~ 195 (281)
.+++|+=+|+ |.+|..++ ..| .+|+++|. ++.++.++ .. .+.+...+..+.....-.-..
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~--------~~~~~~~d~~~~~~~~~~~~~ 69 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RM--------GVATKQVDAKDEAGLAKALGG 69 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TT--------TCEEEECCTTCHHHHHHHTTT
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hC--------CCcEEEecCCCHHHHHHHHcC
Confidence 4568999998 55565444 467 68999999 55554443 11 234444443321110001136
Q ss_pred CcEEEEccc
Q 023543 196 PDYVLGSDV 204 (281)
Q Consensus 196 fD~Iia~d~ 204 (281)
+|+|+.+-.
T Consensus 70 ~d~vi~~~~ 78 (118)
T 3ic5_A 70 FDAVISAAP 78 (118)
T ss_dssp CSEEEECSC
T ss_pred CCEEEECCC
Confidence 899887653
No 429
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=68.11 E-value=9.9 Score=32.25 Aligned_cols=80 Identities=10% Similarity=0.087 Sum_probs=48.5
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec--hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC--c-
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL--PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD--L- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~--~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~--~- 191 (281)
...++++|=-|++.|+ ++..++..|++|+++|. ++.++.+...+...+ .++.+...|..+..... +
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 99 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG------ARVIFLRADLADLSSHQATVD 99 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT------CCEEEEECCTTSGGGHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHHHHHH
Confidence 3578999999987663 23344557999999996 344555555554432 35777776655432110 0
Q ss_pred ----CCCCCcEEEEcccc
Q 023543 192 ----IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 ----~~~~fD~Iia~d~i 205 (281)
.-++.|++|.+.-+
T Consensus 100 ~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 100 AVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHHSCCCEEEEECC-
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 01478999986654
No 430
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=67.83 E-value=10 Score=32.49 Aligned_cols=41 Identities=27% Similarity=0.229 Sum_probs=31.5
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHH
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLK 160 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~ 160 (281)
.++||.+|==|++.|+ ++..+++.|++|+++|. .+.++.+.
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~ 70 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAI 70 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 3789999999998874 44556668999999999 66665443
No 431
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=67.55 E-value=6.2 Score=34.87 Aligned_cols=93 Identities=16% Similarity=0.195 Sum_probs=54.2
Q ss_pred ccCCCeEEEECCC--cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-C----C
Q 023543 120 LLHGKKIVELGSG--CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-Q----D 190 (281)
Q Consensus 120 ~~~~~~VLELGcG--tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-~----~ 190 (281)
..+|++||-.|++ .|...+.+++ .|++|+++|. ++.++.+++ .+.. ..++..+... . .
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---------~~~d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NGAH---------EVFNHREVNYIDKIKKY 234 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---------EEEETTSTTHHHHHHHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----cCCC---------EEEeCCCchHHHHHHHH
Confidence 3568999999973 3544444443 7899999998 666665432 2221 1223222110 0 0
Q ss_pred cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 ~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
....++|+|+.+-- ...+....++++++|++++..
T Consensus 235 ~~~~~~D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 235 VGEKGIDIIIEMLA-------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HCTTCEEEEEESCH-------HHHHHHHHHHEEEEEEEEECC
T ss_pred cCCCCcEEEEECCC-------hHHHHHHHHhccCCCEEEEEe
Confidence 11236898886533 234566678889999876653
No 432
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=67.44 E-value=9.2 Score=35.24 Aligned_cols=55 Identities=24% Similarity=0.434 Sum_probs=33.7
Q ss_pred HHHHHHHHhhhhccCccccCCCeEEEECCCcCHHHHHHH----HcC---CEEEEEechhHHHHHHH
Q 023543 103 GVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAA----LLG---AQVILTDLPDRLRLLKK 161 (281)
Q Consensus 103 s~~la~~l~~~~~~~~~~~~~~~VLELGcGtG~~~i~~a----~~g---~~V~~tD~~~~l~~~~~ 161 (281)
+..++.|+.+.... ...-+|+|+|+|.|.+..-+. ..+ .+++.++.+..+...++
T Consensus 122 Ge~la~~~~~~~~~----~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~ 183 (432)
T 4f3n_A 122 AQTLARPVAQALDA----SGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQR 183 (432)
T ss_dssp HHHHHHHHHHHHHH----HTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHH
T ss_pred HHHHHHHHHHHHHh----cCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHH
Confidence 34567776654321 123599999999997664332 222 37999999544443333
No 433
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=67.41 E-value=6.3 Score=34.79 Aligned_cols=93 Identities=12% Similarity=0.087 Sum_probs=54.5
Q ss_pred ccCCCeEEEECC-C-cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-C---Cc
Q 023543 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-Q---DL 191 (281)
Q Consensus 120 ~~~~~~VLELGc-G-tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-~---~~ 191 (281)
..+|++||=.|+ | .|...+.+++ .|++|+++|. ++.++.+++ .+.. ..++..+... . ..
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---------~~~~~~~~~~~~~~~~~ 231 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----LGAK---------RGINYRSEDFAAVIKAE 231 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCS---------EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCC---------EEEeCCchHHHHHHHHH
Confidence 357889999953 3 2555554454 7999999998 666776654 2322 1122221100 0 01
Q ss_pred CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
....+|+|+.+--- ..+....+.++++|++++..
T Consensus 232 ~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 232 TGQGVDIILDMIGA-------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp HSSCEEEEEESCCG-------GGHHHHHHTEEEEEEEEECC
T ss_pred hCCCceEEEECCCH-------HHHHHHHHHhccCCEEEEEE
Confidence 13578988865332 24566677888998876653
No 434
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=67.17 E-value=6.6 Score=33.91 Aligned_cols=45 Identities=27% Similarity=0.429 Sum_probs=29.5
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCC-EEEEEec-hhHHHHHHHHHHH
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGA-QVILTDL-PDRLRLLKKNIEN 165 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~ 165 (281)
..++++||=+|+| |. +...++..|+ +|+.++. .+..+.+.+.+..
T Consensus 124 ~l~~k~vlVlGaG-G~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~ 173 (283)
T 3jyo_A 124 NAKLDSVVQVGAG-GVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN 173 (283)
T ss_dssp TCCCSEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHh
Confidence 3679999999997 42 2334455787 7999998 5555444444443
No 435
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=67.05 E-value=5.8 Score=36.45 Aligned_cols=42 Identities=24% Similarity=0.352 Sum_probs=30.9
Q ss_pred ccCCCeEEEECC-Cc-CHHHHHHHH-cCCEEEEEec-hhHHHHHHH
Q 023543 120 LLHGKKIVELGS-GC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (281)
Q Consensus 120 ~~~~~~VLELGc-Gt-G~~~i~~a~-~g~~V~~tD~-~~~l~~~~~ 161 (281)
..+|.+||=+|+ |. |..++.+|+ .|++|++++. ++.++.+++
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRA 271 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh
Confidence 357889999998 43 666666665 7899999988 666776653
No 436
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=66.89 E-value=15 Score=30.84 Aligned_cols=79 Identities=18% Similarity=0.244 Sum_probs=48.6
Q ss_pred CCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC-c-----
Q 023543 122 HGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-L----- 191 (281)
Q Consensus 122 ~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~-~----- 191 (281)
.++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+..... +
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~ 76 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG------GTALAQVLDVTDRHSVAAFAQAAV 76 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT------CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 57889999987663 23344557999999999 666666665555442 34666666654321100 0
Q ss_pred -CCCCCcEEEEccccC
Q 023543 192 -IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 -~~~~fD~Iia~d~iy 206 (281)
.-++.|++|.+.-+.
T Consensus 77 ~~~g~iD~lVnnAG~~ 92 (264)
T 3tfo_A 77 DTWGRIDVLVNNAGVM 92 (264)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 014689999866554
No 437
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=66.65 E-value=16 Score=31.05 Aligned_cols=81 Identities=20% Similarity=0.154 Sum_probs=47.0
Q ss_pred ccCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc-
Q 023543 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~- 191 (281)
.++|+++|=-|++.| +|.. ++..|++|+++|. ++.++.+...+...+.. .+.+...|..+..+. .+
T Consensus 30 ~l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~ 103 (281)
T 4dry_A 30 SGEGRIALVTGGGTG-VGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN-----IVRAVVCDVGDPDQVAALFA 103 (281)
T ss_dssp ----CEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-----CEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-----eEEEEEcCCCCHHHHHHHHH
Confidence 367899999997765 3443 4457999999999 66666665555544322 346666665432110 00
Q ss_pred ----CCCCCcEEEEccccC
Q 023543 192 ----IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ----~~~~fD~Iia~d~iy 206 (281)
.-+++|++|.+.-+.
T Consensus 104 ~~~~~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 104 AVRAEFARLDLLVNNAGSN 122 (281)
T ss_dssp HHHHHHSCCSEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 014689999866543
No 438
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=66.52 E-value=19 Score=30.23 Aligned_cols=83 Identities=16% Similarity=0.170 Sum_probs=49.9
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc--
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-- 191 (281)
.+.+++||=-|++.|+ ++..++..|++|+++|. ++.++.+.+.+...+.. ..++.+...|..+.... .+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~ 84 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGAN---GGAIRYEPTDITNEDETARAVDA 84 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCS---SCEEEEEECCTTSHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCC---CceEEEEeCCCCCHHHHHHHHHH
Confidence 3678999999976653 23344557999999999 66666665555543321 12566666664432110 00
Q ss_pred ---CCCCCcEEEEcccc
Q 023543 192 ---IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 ---~~~~fD~Iia~d~i 205 (281)
..+++|+++.+.-+
T Consensus 85 ~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 85 VTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 01468999976554
No 439
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=66.51 E-value=21 Score=29.47 Aligned_cols=81 Identities=25% Similarity=0.256 Sum_probs=48.9
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEec--CCCCCC-Cc-
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTW--GDDPDQ-DL- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w--~~~~~~-~~- 191 (281)
.+++++||=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+. .++.+...|. .+.... .+
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 83 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-----RQPQWFILDLLTCTSENCQQLA 83 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-----CCCEEEECCTTTCCHHHHHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-----CCceEEEEecccCCHHHHHHHH
Confidence 4789999999977653 23344557999999999 6666666555554432 1455666554 211100 00
Q ss_pred -----CCCCCcEEEEcccc
Q 023543 192 -----IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 -----~~~~fD~Iia~d~i 205 (281)
..+++|++|.+--+
T Consensus 84 ~~~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 84 QRIAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHHHCSCCSEEEECCCC
T ss_pred HHHHHhCCCCCEEEECCcc
Confidence 12478999986554
No 440
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=66.07 E-value=24 Score=29.01 Aligned_cols=78 Identities=24% Similarity=0.270 Sum_probs=47.3
Q ss_pred cCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc--
Q 023543 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-- 191 (281)
+.++++|=.|++.| +|.. ++..|++|+++|. ++.++.+.+.+...+ .++.+...|..+.... .+
T Consensus 5 l~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~~~~~~~~~~~~ 77 (247)
T 2jah_A 5 LQGKVALITGASSG-IGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG------AKVHVLELDVADRQGVDAAVAS 77 (247)
T ss_dssp TTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHH
Confidence 57899999997655 4444 4457999999999 666665555544332 2466666665432110 00
Q ss_pred ---CCCCCcEEEEcccc
Q 023543 192 ---IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 ---~~~~fD~Iia~d~i 205 (281)
.-.++|+++.+--+
T Consensus 78 ~~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 78 TVEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 01468999876544
No 441
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=65.89 E-value=18 Score=30.24 Aligned_cols=84 Identities=18% Similarity=0.229 Sum_probs=49.0
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc-C
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-I 192 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-~ 192 (281)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+.+.+...... ..+.+...|..+.... .+ .
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~D~~~~~~~~~~~~~ 82 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPD----AILQPVVADLGTEQGCQDVIEK 82 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTT----CEEEEEECCTTSHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC----ceEEEEecCCCCHHHHHHHHHh
Confidence 3678999999977653 23344457999999999 66666555555544322 2455555554321100 00 1
Q ss_pred CCCCcEEEEccccCC
Q 023543 193 QPLPDYVLGSDVIYS 207 (281)
Q Consensus 193 ~~~fD~Iia~d~iy~ 207 (281)
-+++|+++.+--+..
T Consensus 83 ~g~id~lv~nAg~~~ 97 (267)
T 3t4x_A 83 YPKVDILINNLGIFE 97 (267)
T ss_dssp CCCCSEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 246899998655543
No 442
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=65.87 E-value=5.7 Score=29.94 Aligned_cols=36 Identities=17% Similarity=0.309 Sum_probs=25.4
Q ss_pred CCeEEEECCCcCHHHHHHH----HcCCEEEEEec-hhHHHHHH
Q 023543 123 GKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLK 160 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a----~~g~~V~~tD~-~~~l~~~~ 160 (281)
.++|+=+||| .+|..++ ..|.+|+++|. ++.++.++
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~ 47 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELR 47 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred CCCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 4578888875 4554444 46889999999 77766555
No 443
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=65.60 E-value=17 Score=30.87 Aligned_cols=99 Identities=20% Similarity=0.312 Sum_probs=51.9
Q ss_pred CeEEEECCCc-C-HHHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCC--CCCcE
Q 023543 124 KKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQ--PLPDY 198 (281)
Q Consensus 124 ~~VLELGcGt-G-~~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~--~~fD~ 198 (281)
.+|.=+|+|. | .++..+++.|.+|++.|. ++.++.++++ +.............+...+ ...... ..+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~ 77 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN----GLIADFNGEEVVANLPIFS--PEEIDHQNEQVDL 77 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH----CEEEEETTEEEEECCCEEC--GGGCCTTSCCCSE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC----CEEEEeCCCeeEecceeec--chhhcccCCCCCE
Confidence 4688888874 3 334445567889999999 6666554432 2210000000000000001 001111 26899
Q ss_pred EEEccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 023543 199 VLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 199 Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
|+.+=.- .....+++.+...++++..++..
T Consensus 78 vi~~v~~---~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 78 IIALTKA---QQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp EEECSCH---HHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EEEEecc---ccHHHHHHHHHHhcCCCCEEEEe
Confidence 8876543 24677777787788887765443
No 444
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=65.52 E-value=24 Score=29.64 Aligned_cols=80 Identities=14% Similarity=0.156 Sum_probs=47.4
Q ss_pred ccCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc-
Q 023543 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~- 191 (281)
.++++++|=-|++.|+ |.. +++.|++|+++|. .+.++.+...+....- .++.+...|..+.... .+
T Consensus 24 ~l~~k~~lVTGas~GI-G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~ 97 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGI-GFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-----RRCLPLSMDVRAPPAVMAAVD 97 (277)
T ss_dssp TTTTCEEEEETTTSHH-HHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS-----SCEEEEECCTTCHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CcEEEEEcCCCCHHHHHHHHH
Confidence 4689999999987653 443 4457999999999 5555444443332211 2566677665432110 00
Q ss_pred ----CCCCCcEEEEcccc
Q 023543 192 ----IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 ----~~~~fD~Iia~d~i 205 (281)
.-+++|++|.+--+
T Consensus 98 ~~~~~~g~id~lv~nAg~ 115 (277)
T 4fc7_A 98 QALKEFGRIDILINCAAG 115 (277)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCcC
Confidence 01478999976544
No 445
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=65.05 E-value=25 Score=29.09 Aligned_cols=83 Identities=16% Similarity=0.208 Sum_probs=50.0
Q ss_pred cCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc---
Q 023543 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL--- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~--- 191 (281)
..++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+.+.+...... ..++.+...|..+.... .+
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKH---VQEPIVLPLDITDCTKADTEIKDI 81 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTT---SCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccc---cCcceEEeccCCCHHHHHHHHHHH
Confidence 578999999987663 23344557999999999 66666666555544211 12466666665432110 00
Q ss_pred --CCCCCcEEEEccccC
Q 023543 192 --IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 --~~~~fD~Iia~d~iy 206 (281)
..++.|+++.+.-+.
T Consensus 82 ~~~~g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 82 HQKYGAVDILVNAAAMF 98 (250)
T ss_dssp HHHHCCEEEEEECCCCC
T ss_pred HHhcCCCCEEEECCCcC
Confidence 014689999866554
No 446
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=64.96 E-value=18 Score=30.11 Aligned_cols=79 Identities=23% Similarity=0.275 Sum_probs=49.2
Q ss_pred ccCCCeEEEECCCcCHHHHHH----HHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc-
Q 023543 120 LLHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~----a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~- 191 (281)
..++++||=.|++.| +|..+ ++.|++|+++|. .+.++.+...+...+ .++.+...|..+.... .+
T Consensus 26 ~l~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~ 98 (262)
T 3rkr_A 26 SLSGQVAVVTGASRG-IGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG------GEAESHACDLSHSDAIAAFAT 98 (262)
T ss_dssp TTTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CEEEEEECCTTCHHHHHHHHH
T ss_pred ccCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC------CceeEEEecCCCHHHHHHHHH
Confidence 367899999997655 45444 457999999999 666666665555442 3466666654432110 00
Q ss_pred ----CCCCCcEEEEcccc
Q 023543 192 ----IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 ----~~~~fD~Iia~d~i 205 (281)
..+++|++|.+.-+
T Consensus 99 ~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 99 GVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHHSCCSEEEECCCC
T ss_pred HHHHhcCCCCEEEECCCc
Confidence 11468999986654
No 447
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=64.95 E-value=7.6 Score=35.94 Aligned_cols=37 Identities=32% Similarity=0.461 Sum_probs=26.9
Q ss_pred CeEEEECCCc-CH-HHHHHHHcCCEEEEEec-hhHHHHHH
Q 023543 124 KKIVELGSGC-GL-VGCIAALLGAQVILTDL-PDRLRLLK 160 (281)
Q Consensus 124 ~~VLELGcGt-G~-~~i~~a~~g~~V~~tD~-~~~l~~~~ 160 (281)
.+|-=+|+|. |+ .+..+|..|.+|+++|+ ++.++.++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln 61 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLR 61 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence 4777888775 54 34566678999999999 66666553
No 448
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=64.92 E-value=18 Score=30.48 Aligned_cols=82 Identities=24% Similarity=0.208 Sum_probs=50.5
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-C-c--
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-D-L-- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~-~-- 191 (281)
.+++++||=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.... . +
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dl~d~~~v~~~~~~ 102 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG------GKALPIRCDVTQPDQVRGMLDQ 102 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT------CCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CeEEEEEcCCCCHHHHHHHHHH
Confidence 4689999999987653 23344557999999999 666666655555433 2456666665432110 0 0
Q ss_pred ---CCCCCcEEEEccccCC
Q 023543 192 ---IQPLPDYVLGSDVIYS 207 (281)
Q Consensus 192 ---~~~~fD~Iia~d~iy~ 207 (281)
.-+++|++|.+--+..
T Consensus 103 ~~~~~g~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 103 MTGELGGIDIAVCNAGIVS 121 (276)
T ss_dssp HHHHHSCCSEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 0137899998655543
No 449
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=64.90 E-value=8.1 Score=33.63 Aligned_cols=93 Identities=20% Similarity=0.080 Sum_probs=53.8
Q ss_pred ccCCCeEEEECC--CcCHHHHHHH-HcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-C----C
Q 023543 120 LLHGKKIVELGS--GCGLVGCIAA-LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-Q----D 190 (281)
Q Consensus 120 ~~~~~~VLELGc--GtG~~~i~~a-~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-~----~ 190 (281)
..++++||-.|+ |.|...+.++ ..|++|+++|. ++.++.+++ .+.. ..++..+... . .
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~g~~---------~~~d~~~~~~~~~i~~~ 209 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK----LGCH---------HTINYSTQDFAEVVREI 209 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCS---------EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCC---------EEEECCCHHHHHHHHHH
Confidence 357889999996 3355544444 37899999999 556666653 2221 1123221100 0 0
Q ss_pred cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 ~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
.....+|+++.+--- ..++...++++++|++++..
T Consensus 210 ~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 210 TGGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp HTTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECC
T ss_pred hCCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEe
Confidence 112468988865331 34566677888888876553
No 450
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=64.77 E-value=18 Score=30.42 Aligned_cols=80 Identities=16% Similarity=0.054 Sum_probs=49.1
Q ss_pred cCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-Cc----
Q 023543 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DL---- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~---- 191 (281)
+++++||=-|++.|+ ++..++..|++|+++|. ++.++.+...+...+. ++.+...|..+.... .+
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~~~ 99 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL------EGRGAVLNVNDATAVDALVEST 99 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC------CCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC------cEEEEEEeCCCHHHHHHHHHHH
Confidence 678999999976653 23344557999999999 6666666666655432 355555554332110 00
Q ss_pred --CCCCCcEEEEccccC
Q 023543 192 --IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 --~~~~fD~Iia~d~iy 206 (281)
.-++.|++|.+.-+.
T Consensus 100 ~~~~g~iD~lvnnAg~~ 116 (270)
T 3ftp_A 100 LKEFGALNVLVNNAGIT 116 (270)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 014689999865543
No 451
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=64.47 E-value=26 Score=29.81 Aligned_cols=80 Identities=20% Similarity=0.250 Sum_probs=49.7
Q ss_pred cCCCeEEEECCCcCHHHHHH----HHcCC---EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC---
Q 023543 121 LHGKKIVELGSGCGLVGCIA----ALLGA---QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--- 189 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~----a~~g~---~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--- 189 (281)
++++++|=-|++.|+ |..+ +..|+ +|++++. .+.++.+.+.+...... .++.+...|..+....
T Consensus 31 l~~k~~lVTGas~GI-G~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dv~d~~~v~~~ 105 (287)
T 3rku_A 31 LAKKTVLITGASAGI-GKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN----AKVHVAQLDITQAEKIKPF 105 (287)
T ss_dssp HTTCEEEEESTTSHH-HHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTT----CEEEEEECCTTCGGGHHHH
T ss_pred cCCCEEEEecCCChH-HHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCC----CeEEEEECCCCCHHHHHHH
Confidence 578999999987653 4443 34576 9999999 66676666655543211 3566677665543211
Q ss_pred --Cc--CCCCCcEEEEcccc
Q 023543 190 --DL--IQPLPDYVLGSDVI 205 (281)
Q Consensus 190 --~~--~~~~fD~Iia~d~i 205 (281)
.. .-+++|++|.+.-+
T Consensus 106 ~~~~~~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 106 IENLPQEFKDIDILVNNAGK 125 (287)
T ss_dssp HHTSCGGGCSCCEEEECCCC
T ss_pred HHHHHHhcCCCCEEEECCCc
Confidence 00 11478999986554
No 452
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=64.31 E-value=8.4 Score=35.15 Aligned_cols=43 Identities=12% Similarity=-0.085 Sum_probs=33.7
Q ss_pred CCeEEEECCCcCHHHHHHHHcCC---E----EEEEec-hhHHHHHHHHHHH
Q 023543 123 GKKIVELGSGCGLVGCIAALLGA---Q----VILTDL-PDRLRLLKKNIEN 165 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~~g~---~----V~~tD~-~~~l~~~~~N~~~ 165 (281)
.-+||||-||+|-.++.+.+.|. - |.++|+ +.+++..+.|...
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 34999999999988877777662 2 788999 7788888877643
No 453
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=64.25 E-value=9.1 Score=40.35 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=35.0
Q ss_pred CCCeEEEECCCcCHHHHHHHHcCC-E-EEEEec-hhHHHHHHHHH
Q 023543 122 HGKKIVELGSGCGLVGCIAALLGA-Q-VILTDL-PDRLRLLKKNI 163 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a~~g~-~-V~~tD~-~~~l~~~~~N~ 163 (281)
..-++|||-||+|-+++.+.+.|. + |.++|+ +.+++..+.|.
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC
Confidence 345899999999999888888896 5 789999 77888777774
No 454
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=64.18 E-value=11 Score=32.32 Aligned_cols=40 Identities=38% Similarity=0.527 Sum_probs=29.6
Q ss_pred CeEEEECCCc-CH-HHHHHHHcCCEEEEEec-hhHHHHHHHHH
Q 023543 124 KKIVELGSGC-GL-VGCIAALLGAQVILTDL-PDRLRLLKKNI 163 (281)
Q Consensus 124 ~~VLELGcGt-G~-~~i~~a~~g~~V~~tD~-~~~l~~~~~N~ 163 (281)
++|.=||+|. |. ++..+++.|.+|++.|. ++.++.++..+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i 58 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI 58 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 5788899986 43 56666778999999999 67777655443
No 455
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=64.11 E-value=22 Score=29.00 Aligned_cols=79 Identities=19% Similarity=0.108 Sum_probs=49.1
Q ss_pred cCCCeEEEECCCcCHHHH----HHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC------
Q 023543 121 LHGKKIVELGSGCGLVGC----IAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ------ 189 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i----~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~------ 189 (281)
++++++|=.|++.| +|. .+++.|++|++++. ++.++.+...+...+ .++.+...|..+....
T Consensus 3 l~~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~ 75 (247)
T 3lyl_A 3 LNEKVALVTGASRG-IGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG------FKARGLVLNISDIESIQNFFAE 75 (247)
T ss_dssp TTTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEEecCCCHHHHHHHHHH
Confidence 46889999997655 344 44457999999999 666666555555443 2466666665432110
Q ss_pred -CcCCCCCcEEEEccccC
Q 023543 190 -DLIQPLPDYVLGSDVIY 206 (281)
Q Consensus 190 -~~~~~~fD~Iia~d~iy 206 (281)
.-..+++|+++.+.-+.
T Consensus 76 ~~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 76 IKAENLAIDILVNNAGIT 93 (247)
T ss_dssp HHHTTCCCSEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 00124689999866554
No 456
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=63.87 E-value=14 Score=30.82 Aligned_cols=80 Identities=19% Similarity=0.225 Sum_probs=48.3
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc--
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-- 191 (281)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+..+. .+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~ 76 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP------GQILTVQMDVRNTDDIQKMIEQ 76 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST------TCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEccCCCHHHHHHHHHH
Confidence 3678999999976653 23344457999999999 666665554443321 3566777665432110 00
Q ss_pred ---CCCCCcEEEEcccc
Q 023543 192 ---IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 ---~~~~fD~Iia~d~i 205 (281)
..++.|+++.+.-+
T Consensus 77 ~~~~~g~id~lv~nAg~ 93 (257)
T 3imf_A 77 IDEKFGRIDILINNAAG 93 (257)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 01478999976554
No 457
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=63.84 E-value=12 Score=27.93 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=25.7
Q ss_pred CCCeEEEECCCcCHHHHHHH----HcCCEEEEEec-hhHHHHHH
Q 023543 122 HGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLK 160 (281)
Q Consensus 122 ~~~~VLELGcGtG~~~i~~a----~~g~~V~~tD~-~~~l~~~~ 160 (281)
..++|+=+||| .+|..++ ..|.+|+++|. ++.++.++
T Consensus 5 ~~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~ 46 (141)
T 3llv_A 5 GRYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLE 46 (141)
T ss_dssp -CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence 35689999985 4555444 46889999999 66665554
No 458
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=63.81 E-value=15 Score=31.50 Aligned_cols=82 Identities=18% Similarity=0.224 Sum_probs=49.4
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--C---
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--D--- 190 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~--- 190 (281)
.+++++||=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+. .++.+...|..+.... .
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 112 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-----GNVIGVRLDVSDPGSCADAART 112 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS-----SCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-----CcEEEEEEeCCCHHHHHHHHHH
Confidence 4688999999977653 23344557999999999 6666555544443321 3566677665432110 0
Q ss_pred c--CCCCCcEEEEccccC
Q 023543 191 L--IQPLPDYVLGSDVIY 206 (281)
Q Consensus 191 ~--~~~~fD~Iia~d~iy 206 (281)
. ...++|++|.+.-+.
T Consensus 113 ~~~~~g~iD~lvnnAg~~ 130 (293)
T 3rih_A 113 VVDAFGALDVVCANAGIF 130 (293)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 0 014689999865544
No 459
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=63.77 E-value=28 Score=28.91 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=47.8
Q ss_pred ccCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc-
Q 023543 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~- 191 (281)
.++++++|=.|++.| +|.. +++.|++|+++|. ++.++.+.+.+...... .++.+...|..+.... .+
T Consensus 10 ~l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~ 84 (267)
T 1iy8_A 10 RFTDRVVLITGGGSG-LGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD----AEVLTTVADVSDEAQVEAYVT 84 (267)
T ss_dssp CCTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTT----CCEEEEECCTTSHHHHHHHHH
T ss_pred cCCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC----ceEEEEEccCCCHHHHHHHHH
Confidence 367899999997655 3443 4457999999999 65565555444433111 2466666665432110 00
Q ss_pred ----CCCCCcEEEEcccc
Q 023543 192 ----IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 ----~~~~fD~Iia~d~i 205 (281)
...++|++|.+--+
T Consensus 85 ~~~~~~g~id~lv~nAg~ 102 (267)
T 1iy8_A 85 ATTERFGRIDGFFNNAGI 102 (267)
T ss_dssp HHHHHHSCCSEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 01368999986544
No 460
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=63.77 E-value=9.4 Score=33.90 Aligned_cols=95 Identities=16% Similarity=0.095 Sum_probs=51.1
Q ss_pred ccCCCeEEEEC-CCc-CHHHHHHHH-cCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCC-CCCc-CCC
Q 023543 120 LLHGKKIVELG-SGC-GLVGCIAAL-LGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-DQDL-IQP 194 (281)
Q Consensus 120 ~~~~~~VLELG-cGt-G~~~i~~a~-~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~-~~~~-~~~ 194 (281)
..+|.+||=.| +|. |...+.+|+ .|++|++++.++.++.++ ..+.. ..++..+.. ...+ ...
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~----~lGa~---------~v~~~~~~~~~~~~~~~~ 247 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVR----KLGAD---------DVIDYKSGSVEEQLKSLK 247 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCS---------EEEETTSSCHHHHHHTSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHH----HcCCC---------EEEECCchHHHHHHhhcC
Confidence 34688999999 453 666665555 689999998654455543 23322 112222110 0001 114
Q ss_pred CCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 195 LPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 195 ~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
++|+|+-+--- . ...+....++++++|+++...
T Consensus 248 g~D~vid~~g~--~---~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 248 PFDFILDNVGG--S---TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp CBSEEEESSCT--T---HHHHGGGGBCSSSCCEEEESC
T ss_pred CCCEEEECCCC--h---hhhhHHHHHhhcCCcEEEEeC
Confidence 68988754321 1 122344445678888876554
No 461
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=63.64 E-value=8.8 Score=35.06 Aligned_cols=41 Identities=34% Similarity=0.469 Sum_probs=28.9
Q ss_pred cCCCeEEEECCCc-CHHHHHHH-HcCCEEEEEec-hhHHHHHHH
Q 023543 121 LHGKKIVELGSGC-GLVGCIAA-LLGAQVILTDL-PDRLRLLKK 161 (281)
Q Consensus 121 ~~~~~VLELGcGt-G~~~i~~a-~~g~~V~~tD~-~~~l~~~~~ 161 (281)
+++.+|+=+|+|. |......+ .+|++|++.|. +..++.++.
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 4678999999873 44333333 37999999999 666666653
No 462
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=63.56 E-value=8.9 Score=34.83 Aligned_cols=39 Identities=33% Similarity=0.420 Sum_probs=27.9
Q ss_pred cCCCeEEEECCCc-CHHHHHHH-HcCCEEEEEec-hhHHHHH
Q 023543 121 LHGKKIVELGSGC-GLVGCIAA-LLGAQVILTDL-PDRLRLL 159 (281)
Q Consensus 121 ~~~~~VLELGcGt-G~~~i~~a-~~g~~V~~tD~-~~~l~~~ 159 (281)
+++++|+=+|+|. |...+..+ .+|++|+++|. ++.++.+
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 5689999999864 44433333 37999999999 6666554
No 463
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=63.45 E-value=0.55 Score=46.91 Aligned_cols=92 Identities=23% Similarity=0.217 Sum_probs=52.5
Q ss_pred ccCCCeEEEECC-C-cCHHHHHHHH-cCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCC-CCC----Cc
Q 023543 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD-PDQ----DL 191 (281)
Q Consensus 120 ~~~~~~VLELGc-G-tG~~~i~~a~-~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~-~~~----~~ 191 (281)
..+|.+||=.|+ | .|..++.+|+ .|++|++|+.++-.+.++ .+.. .+ ++..+. +.. ..
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k~~~l~-----lga~-----~v----~~~~~~~~~~~i~~~t 408 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVE-----LSRE-----HL----ASSRTCDFEQQFLGAT 408 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGGGGGSC-----SCGG-----GE----ECSSSSTHHHHHHHHS
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHHhhhhh-----cChh-----he----eecCChhHHHHHHHHc
Confidence 357889999995 4 3777777776 799999998843222221 1111 11 111000 000 01
Q ss_pred CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 192 IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
....+|+|+-+-. ...++...++++++|+++...
T Consensus 409 ~g~GvDvVld~~g-------g~~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 409 GGRGVDVVLNSLA-------GEFADASLRMLPRGGRFLELG 442 (795)
T ss_dssp CSSCCSEEEECCC-------TTTTHHHHTSCTTCEEEEECC
T ss_pred CCCCeEEEEECCC-------cHHHHHHHHHhcCCCEEEEec
Confidence 2347998886422 124466678899999987664
No 464
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=63.37 E-value=16 Score=30.91 Aligned_cols=81 Identities=20% Similarity=0.155 Sum_probs=50.4
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCC-----
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD----- 190 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~----- 190 (281)
.++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.....
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~~~~~~~~ 103 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG------GTAQELAGDLSEAGAGTDLIER 103 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT------CCEEEEECCTTSTTHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC------CeEEEEEecCCCHHHHHHHHHH
Confidence 3689999999977653 23344557999999999 666655555554432 35666776654332110
Q ss_pred -cCCCCCcEEEEccccC
Q 023543 191 -LIQPLPDYVLGSDVIY 206 (281)
Q Consensus 191 -~~~~~fD~Iia~d~iy 206 (281)
....++|+++.+.-+.
T Consensus 104 ~~~~g~iD~lvnnAg~~ 120 (275)
T 4imr_A 104 AEAIAPVDILVINASAQ 120 (275)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHhCCCCEEEECCCCC
Confidence 0014789999866543
No 465
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=63.21 E-value=25 Score=29.58 Aligned_cols=77 Identities=23% Similarity=0.237 Sum_probs=46.1
Q ss_pred ccCCCeEEEECCCcCHHHHHH----HHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-CcC-
Q 023543 120 LLHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DLI- 192 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~----a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~~- 192 (281)
..++++||=.|++.| +|..+ +..|++|+++|. ++.++.+...+...+. .++.+...|..+.... .+.
T Consensus 25 ~~~~k~vlITGasgg-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~d~~~v~~~~~ 98 (286)
T 1xu9_A 25 MLQGKKVIVTGASKG-IGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-----ASAHYIAGTMEDMTFAEQFVA 98 (286)
T ss_dssp GGTTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-----SEEEEEECCTTCHHHHHHHHH
T ss_pred hcCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-----CceEEEeCCCCCHHHHHHHHH
Confidence 367899999997654 45444 447999999999 6666655544444321 2466666654432110 000
Q ss_pred -----CCCCcEEEEc
Q 023543 193 -----QPLPDYVLGS 202 (281)
Q Consensus 193 -----~~~fD~Iia~ 202 (281)
.+++|++|.+
T Consensus 99 ~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 99 QAGKLMGGLDMLILN 113 (286)
T ss_dssp HHHHHHTSCSEEEEC
T ss_pred HHHHHcCCCCEEEEC
Confidence 1478999965
No 466
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=63.14 E-value=9.2 Score=33.54 Aligned_cols=90 Identities=20% Similarity=0.231 Sum_probs=53.3
Q ss_pred ccCCCeEEEECC-C-cCHHHHHHHH-cCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCC-CCC----Cc
Q 023543 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD-PDQ----DL 191 (281)
Q Consensus 120 ~~~~~~VLELGc-G-tG~~~i~~a~-~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~-~~~----~~ 191 (281)
..+|++||=+|+ | .|...+.+++ .|++|+++..++.++.+++ .+.. . ++ .+. ... ..
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~----lGa~--------~--i~-~~~~~~~~~~~~~ 212 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSDLEYVRD----LGAT--------P--ID-ASREPEDYAAEHT 212 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH----HTSE--------E--EE-TTSCHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHH----cCCC--------E--ec-cCCCHHHHHHHHh
Confidence 357899999994 4 3666665555 7899999933666665543 2322 1 22 111 100 01
Q ss_pred CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 023543 192 IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
....+|+|+-+-- ...+....++++++|.+++.
T Consensus 213 ~~~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 213 AGQGFDLVYDTLG-------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp TTSCEEEEEESSC-------THHHHHHHHHEEEEEEEEES
T ss_pred cCCCceEEEECCC-------cHHHHHHHHHHhcCCeEEEE
Confidence 1246898875432 14566777788999987764
No 467
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=62.86 E-value=45 Score=29.13 Aligned_cols=102 Identities=21% Similarity=0.288 Sum_probs=53.7
Q ss_pred CCCeEEEECCCc-CH-HHHHHHHcCC-EEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCCc
Q 023543 122 HGKKIVELGSGC-GL-VGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (281)
Q Consensus 122 ~~~~VLELGcGt-G~-~~i~~a~~g~-~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~fD 197 (281)
+..+|.=+|+|. |. ++..++..|. +|++.|+ ++.++....++...........++.+. -+. ...+ ...|
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d~----~ea~--~~aD 80 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-YSY----EAAL--TGAD 80 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-CSH----HHHH--TTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe-CCH----HHHh--CCCC
Confidence 346899999875 32 3445555676 8999999 666654333322211000011233321 111 1011 3458
Q ss_pred EEEEcc-ccCCCC-----------------cHHHHHHHHHHhhCCCcEEEEE
Q 023543 198 YVLGSD-VIYSEG-----------------AVGDLLDTLLQLCGTQTTIFLA 231 (281)
Q Consensus 198 ~Iia~d-~iy~~~-----------------~~~~ll~~l~~ll~~~g~~~l~ 231 (281)
+|+.+- +...+. ....+++.+.+.+ |++.++++
T Consensus 81 iVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~ 131 (331)
T 1pzg_A 81 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVV 131 (331)
T ss_dssp EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEE
Confidence 887754 222221 2677777887775 88887655
No 468
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=62.57 E-value=28 Score=29.25 Aligned_cols=79 Identities=14% Similarity=0.043 Sum_probs=47.5
Q ss_pred cCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc--
Q 023543 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-- 191 (281)
+++++||=.|++.| +|.. +++.|++|+++|. ++.++.+.+.+...+ .++.+...|..+.... .+
T Consensus 20 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~~~~~v~~~~~~ 92 (277)
T 2rhc_B 20 QDSEVALVTGATSG-IGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG------VEADGRTCDVRSVPEIEALVAA 92 (277)
T ss_dssp TTSCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEECCCCCHHHHHHHHHH
Confidence 57889999997655 4444 4457999999999 555655555444332 2466666665432110 00
Q ss_pred ---CCCCCcEEEEccccC
Q 023543 192 ---IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ---~~~~fD~Iia~d~iy 206 (281)
.-.++|++|.+--+.
T Consensus 93 ~~~~~g~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 93 VVERYGPVDVLVNNAGRP 110 (277)
T ss_dssp HHHHTCSCSEEEECCCCC
T ss_pred HHHHhCCCCEEEECCCCC
Confidence 014689998765443
No 469
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=62.45 E-value=27 Score=29.51 Aligned_cols=84 Identities=14% Similarity=0.219 Sum_probs=48.6
Q ss_pred ccCCCeEEEECCCcCHHHHHHH----HcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--CcC
Q 023543 120 LLHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DLI 192 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a----~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~~ 192 (281)
.+++++||=.|++ |-+|..++ +.|++|+++|. ++.++.+.+.+...... ....++.+...|..+.... .+.
T Consensus 15 ~l~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~ 92 (303)
T 1yxm_A 15 LLQGQVAIVTGGA-TGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP-TKQARVIPIQCNIRNEEEVNNLVK 92 (303)
T ss_dssp TTTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCT-TCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccc-cCCccEEEEecCCCCHHHHHHHHH
Confidence 4678999999965 44555444 46999999998 56565555555432110 0113566676665432110 000
Q ss_pred -----CCCCcEEEEcccc
Q 023543 193 -----QPLPDYVLGSDVI 205 (281)
Q Consensus 193 -----~~~fD~Iia~d~i 205 (281)
.+++|+||.+.-+
T Consensus 93 ~~~~~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 93 STLDTFGKINFLVNNGGG 110 (303)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 1368999976543
No 470
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=62.42 E-value=28 Score=30.60 Aligned_cols=81 Identities=17% Similarity=0.170 Sum_probs=47.5
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhH-------HHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDR-------LRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD 188 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~-------l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~ 188 (281)
.++|++||=-|++.|+ ++..+++.|++|++++. .+. ++.+.+.+...+ .++.+...|..+...
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g------~~~~~~~~Dv~d~~~ 115 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG------GKALPCIVDVRDEQQ 115 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTT------CEEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcC------CeEEEEEccCCCHHH
Confidence 4789999999987663 23344457999999998 432 344444444432 356666666543211
Q ss_pred C--Cc-----CCCCCcEEEEccccC
Q 023543 189 Q--DL-----IQPLPDYVLGSDVIY 206 (281)
Q Consensus 189 ~--~~-----~~~~fD~Iia~d~iy 206 (281)
. .+ ..+++|++|.+--+.
T Consensus 116 v~~~~~~~~~~~g~iDilVnnAG~~ 140 (346)
T 3kvo_A 116 ISAAVEKAIKKFGGIDILVNNASAI 140 (346)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 0 00 014789999865543
No 471
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=62.36 E-value=55 Score=30.25 Aligned_cols=97 Identities=15% Similarity=0.170 Sum_probs=55.8
Q ss_pred CeEEEECCCc-C-HHHHHHHHcCCEEEEEec-hh-HHHHHHHHHHHhhcCCCC--------CCceEEEEEecCCCCCCCc
Q 023543 124 KKIVELGSGC-G-LVGCIAALLGAQVILTDL-PD-RLRLLKKNIENNLRHGDL--------RGSAVVTELTWGDDPDQDL 191 (281)
Q Consensus 124 ~~VLELGcGt-G-~~~i~~a~~g~~V~~tD~-~~-~l~~~~~N~~~n~~~~~~--------~~~i~~~~l~w~~~~~~~~ 191 (281)
++|-=||+|+ | -++..+++.|.+|++.|. ++ +....++|++........ ..++.+.. ... .
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~-----dl~-a- 127 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITS-----DFH-K- 127 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEES-----CGG-G-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeC-----CHH-H-
Confidence 5788899986 3 456677778999999999 55 344444454322111000 01232221 111 1
Q ss_pred CCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 023543 192 IQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIF 229 (281)
Q Consensus 192 ~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~ 229 (281)
-...|+||-+=. -.......+++.+...++|+.++.
T Consensus 128 -l~~aDlVIeAVp-e~~~vk~~v~~~l~~~~~~~aIla 163 (460)
T 3k6j_A 128 -LSNCDLIVESVI-EDMKLKKELFANLENICKSTCIFG 163 (460)
T ss_dssp -CTTCSEEEECCC-SCHHHHHHHHHHHHTTSCTTCEEE
T ss_pred -HccCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCCEEE
Confidence 145798887632 123345678888888888887653
No 472
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=62.03 E-value=7.5 Score=34.15 Aligned_cols=43 Identities=14% Similarity=0.101 Sum_probs=28.9
Q ss_pred CCCCcEEEEccccCCCC------------cHHHHHHHHHHhhCCCcEEEEEEeeeC
Q 023543 193 QPLPDYVLGSDVIYSEG------------AVGDLLDTLLQLCGTQTTIFLAGELRN 236 (281)
Q Consensus 193 ~~~fD~Iia~d~iy~~~------------~~~~ll~~l~~ll~~~g~~~l~~~~r~ 236 (281)
+.+||+|+. |.-|+.. .+...+..+.++|+++|.+++....+.
T Consensus 56 ~~svDlI~t-DPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~ 110 (319)
T 1eg2_A 56 DDSVQLIIC-DPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQY 110 (319)
T ss_dssp TTCEEEEEE-CCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCC
T ss_pred cCCcCEEEE-CCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCccc
Confidence 456776664 4444432 356677788899999999888765443
No 473
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=62.01 E-value=24 Score=30.11 Aligned_cols=37 Identities=16% Similarity=0.296 Sum_probs=25.4
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCC-EEEEEec-hhHHH
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGA-QVILTDL-PDRLR 157 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~-~V~~tD~-~~~l~ 157 (281)
..+++++|=+|+| |. +...++..|+ +|+.++. .+..+
T Consensus 117 ~l~~k~~lvlGaG-g~~~aia~~L~~~G~~~v~i~~R~~~~a~ 158 (272)
T 3pwz_A 117 PLRNRRVLLLGAG-GAVRGALLPFLQAGPSELVIANRDMAKAL 158 (272)
T ss_dssp CCTTSEEEEECCS-HHHHHHHHHHHHTCCSEEEEECSCHHHHH
T ss_pred CccCCEEEEECcc-HHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 4679999999997 32 2234455785 8999998 54433
No 474
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=61.72 E-value=7.6 Score=33.69 Aligned_cols=93 Identities=16% Similarity=0.094 Sum_probs=54.5
Q ss_pred ccCCCeEEEECCC--cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-C----C
Q 023543 120 LLHGKKIVELGSG--CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-Q----D 190 (281)
Q Consensus 120 ~~~~~~VLELGcG--tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-~----~ 190 (281)
..+|++||-.|++ .|...+.+++ .|++|+++|. ++.++.+++ .+.. ..++..+... . .
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g~~---------~~~~~~~~~~~~~~~~~ 204 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGAW---------QVINYREEDLVERLKEI 204 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCS---------EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCC---------EEEECCCccHHHHHHHH
Confidence 3568999999943 3444444343 7999999999 666666653 2221 1223222110 0 0
Q ss_pred cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 ~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
....++|+++.+-- ...++...++++++|++++..
T Consensus 205 ~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 205 TGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp TTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECC
T ss_pred hCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEe
Confidence 11246898886533 234666777889999876653
No 475
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=61.56 E-value=28 Score=28.87 Aligned_cols=79 Identities=15% Similarity=0.150 Sum_probs=47.6
Q ss_pred cCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc--
Q 023543 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-- 191 (281)
++++++|=.|++.| +|.. ++..|++|+++|. ++.++.+...+...+ .++.+...|..+.... .+
T Consensus 5 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~ 77 (262)
T 1zem_A 5 FNGKVCLVTGAGGN-IGLATALRLAEEGTAIALLDMNREALEKAEASVREKG------VEARSYVCDVTSEEAVIGTVDS 77 (262)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------SCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHHHHHHH
Confidence 57899999998665 3443 4457999999999 555655554444322 2466666665432110 00
Q ss_pred ---CCCCCcEEEEccccC
Q 023543 192 ---IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ---~~~~fD~Iia~d~iy 206 (281)
.-.++|++|.+--+.
T Consensus 78 ~~~~~g~id~lv~nAg~~ 95 (262)
T 1zem_A 78 VVRDFGKIDFLFNNAGYQ 95 (262)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHHhCCCCEEEECCCCC
Confidence 013689999865443
No 476
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=61.47 E-value=8.6 Score=35.09 Aligned_cols=98 Identities=14% Similarity=0.077 Sum_probs=55.2
Q ss_pred ccCCCeEEEECC-C-cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCC---------
Q 023543 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD--------- 186 (281)
Q Consensus 120 ~~~~~~VLELGc-G-tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~--------- 186 (281)
..+|++||=.|+ | .|...+.+++ .|++|++++. ++.++.+++ .+.. ..+.....++.+.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~----lGa~----~~i~~~~~~~~~~~~~~~~~~~ 289 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA----LGCD----LVINRAELGITDDIADDPRRVV 289 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCC----CEEEHHHHTCCTTGGGCHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCC----EEEecccccccccccccccccc
Confidence 457899999997 4 2555555554 6899999988 666666642 2322 0011000011000
Q ss_pred ------CCC--CcCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 187 ------PDQ--DLIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 187 ------~~~--~~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
... ......+|+|+-+-- ...++...++++++|.+++..
T Consensus 290 ~~~~~~~~~v~~~~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 290 ETGRKLAKLVVEKAGREPDIVFEHTG-------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEECSC-------HHHHHHHHHHSCTTCEEEESC
T ss_pred hhhhHHHHHHHHHhCCCceEEEECCC-------chHHHHHHHHHhcCCEEEEEe
Confidence 000 011356898886433 135667777889999877653
No 477
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=61.38 E-value=25 Score=29.66 Aligned_cols=81 Identities=9% Similarity=-0.042 Sum_probs=46.9
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc--
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-- 191 (281)
..+++++|=-|++.|+ ++..++..|++|+++|. ++.++.+.+.+...+ .++.+...|..+.... .+
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~ 94 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG------HDVDGSSCDVTSTDEVHAAVAA 94 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHH
Confidence 3578899999977653 23344557999999999 666665555554432 3566666665432110 00
Q ss_pred ---CCCCCcEEEEccccC
Q 023543 192 ---IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ---~~~~fD~Iia~d~iy 206 (281)
.-++.|++|.+.-+.
T Consensus 95 ~~~~~g~id~lv~nAg~~ 112 (279)
T 3sju_A 95 AVERFGPIGILVNSAGRN 112 (279)
T ss_dssp HHHHHCSCCEEEECCCCC
T ss_pred HHHHcCCCcEEEECCCCC
Confidence 014789999865544
No 478
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=61.06 E-value=35 Score=28.43 Aligned_cols=80 Identities=13% Similarity=0.114 Sum_probs=49.0
Q ss_pred ccCCCeEEEECCCcCHHHHHHH----HcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc-
Q 023543 120 LLHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~a----~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~- 191 (281)
.+.+++||=.|++. -+|..++ +.|++|+++|. ++.++.+.+.+...+ .++.+...|..+.... .+
T Consensus 28 ~l~~k~vlITGasg-gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dl~~~~~v~~~~~ 100 (272)
T 1yb1_A 28 SVTGEIVLITGAGH-GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG------AKVHTFVVDCSNREDIYSSAK 100 (272)
T ss_dssp CCTTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHH
T ss_pred ccCCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC------CeEEEEEeeCCCHHHHHHHHH
Confidence 46789999999654 4555444 46999999999 555655555444432 3566677665432110 00
Q ss_pred ----CCCCCcEEEEccccC
Q 023543 192 ----IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ----~~~~fD~Iia~d~iy 206 (281)
..+++|+||.+.-+.
T Consensus 101 ~~~~~~g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 101 KVKAEIGDVSILVNNAGVV 119 (272)
T ss_dssp HHHHHTCCCSEEEECCCCC
T ss_pred HHHHHCCCCcEEEECCCcC
Confidence 114689999866543
No 479
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=61.04 E-value=6.9 Score=33.77 Aligned_cols=58 Identities=5% Similarity=-0.035 Sum_probs=34.5
Q ss_pred ceEEEEEecCCCCCCCcCCCCCcEEEEccccCCCC--------------------cHHHHHHHHHHhhCCCcEEEEEEe
Q 023543 175 SAVVTELTWGDDPDQDLIQPLPDYVLGSDVIYSEG--------------------AVGDLLDTLLQLCGTQTTIFLAGE 233 (281)
Q Consensus 175 ~i~~~~l~w~~~~~~~~~~~~fD~Iia~d~iy~~~--------------------~~~~ll~~l~~ll~~~g~~~l~~~ 233 (281)
.+.+.+.|+.+... .+.+.+||+|++.-..+... .+..+++.+.++|+|+|.+++...
T Consensus 21 ~~~i~~gD~~~~l~-~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 21 VHRLHVGDAREVLA-SFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp CEEEEESCHHHHHT-TSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEECcHHHHHh-hCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 34555544432111 23456789888665543211 134577788899999999877643
No 480
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=60.57 E-value=14 Score=31.55 Aligned_cols=78 Identities=22% Similarity=0.262 Sum_probs=42.1
Q ss_pred cCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCCCcCCCCC
Q 023543 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (281)
Q Consensus 121 ~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~~~~~~~f 196 (281)
.++++||=+|+..|+ +...++..|++|+.++. .+..+.+.+.+.... .+.+...|+.+.....-.-..+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~ 189 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-------KVNVTAAETADDASRAEAVKGA 189 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-------TCCCEEEECCSHHHHHHHTTTC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEecCCCHHHHHHHHHhC
Confidence 578999999944332 23344557999999998 554444433333221 1223445554321100011347
Q ss_pred cEEEEcccc
Q 023543 197 DYVLGSDVI 205 (281)
Q Consensus 197 D~Iia~d~i 205 (281)
|+||.+-.+
T Consensus 190 DvlVn~ag~ 198 (287)
T 1lu9_A 190 HFVFTAGAI 198 (287)
T ss_dssp SEEEECCCT
T ss_pred CEEEECCCc
Confidence 999886643
No 481
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=60.53 E-value=24 Score=29.85 Aligned_cols=79 Identities=18% Similarity=0.125 Sum_probs=47.4
Q ss_pred cCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc---
Q 023543 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL--- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~--- 191 (281)
+++++||=-|++.|+ ++..+++.|++|+++|. .+.++.+...+...+ .++.+...|..+.... .+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG------GQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEccCCCHHHHHHHHHHH
Confidence 578899999987663 23344557999999999 555655554443322 3566666665432110 00
Q ss_pred --CCCCCcEEEEcccc
Q 023543 192 --IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 --~~~~fD~Iia~d~i 205 (281)
..+++|++|.+.-+
T Consensus 100 ~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 100 VLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 01478999976554
No 482
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=60.15 E-value=33 Score=28.62 Aligned_cols=79 Identities=14% Similarity=0.085 Sum_probs=47.5
Q ss_pred cCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc--
Q 023543 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-- 191 (281)
++++++|=.|++.| +|.. +++.|++|+++|. ++.++.+.+.+...+ .++.+...|..+.... .+
T Consensus 19 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~ 91 (273)
T 1ae1_A 19 LKGTTALVTGGSKG-IGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG------LNVEGSVCDLLSRTERDKLMQT 91 (273)
T ss_dssp CTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCcch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEECCCCCHHHHHHHHHH
Confidence 67899999997655 3443 4457999999999 555555444443322 2466666665432110 00
Q ss_pred ----CCCCCcEEEEccccC
Q 023543 192 ----IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ----~~~~fD~Iia~d~iy 206 (281)
.+.++|+++.+--+.
T Consensus 92 ~~~~~~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 92 VAHVFDGKLNILVNNAGVV 110 (273)
T ss_dssp HHHHTTSCCCEEEECCCCC
T ss_pred HHHHcCCCCcEEEECCCCC
Confidence 115789999865543
No 483
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=59.60 E-value=17 Score=32.57 Aligned_cols=38 Identities=37% Similarity=0.561 Sum_probs=28.0
Q ss_pred cCCCeEEEECCCcCHHHHHHH----HcCCEEEEEec-hhHHHHHH
Q 023543 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLK 160 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a----~~g~~V~~tD~-~~~l~~~~ 160 (281)
+++++|+=+|+| .+|..++ ..|++|+++|. ++.++.++
T Consensus 166 l~g~~V~ViG~G--~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~ 208 (377)
T 2vhw_A 166 VEPADVVVIGAG--TAGYNAARIANGMGATVTVLDINIDKLRQLD 208 (377)
T ss_dssp BCCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 678999999985 5554443 36899999999 66665554
No 484
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=59.59 E-value=12 Score=32.52 Aligned_cols=99 Identities=18% Similarity=0.183 Sum_probs=53.7
Q ss_pred CeEEEECCCc-C-HHHHHHHHcCCEEEEEechhHHHHHHHHHHHhhcCCC--CCCceEEEEEecCCCCCCCcCCCCCcEE
Q 023543 124 KKIVELGSGC-G-LVGCIAALLGAQVILTDLPDRLRLLKKNIENNLRHGD--LRGSAVVTELTWGDDPDQDLIQPLPDYV 199 (281)
Q Consensus 124 ~~VLELGcGt-G-~~~i~~a~~g~~V~~tD~~~~l~~~~~N~~~n~~~~~--~~~~i~~~~l~w~~~~~~~~~~~~fD~I 199 (281)
.+|+=+|+|. | .++..+++.|.+|++.+.+.. +. +..+++... ..+...+....... +..-...++|+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~-~~----i~~~Gl~~~~~~~g~~~~~~~~~~~--~~~~~~~~~DlV 75 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY-ET----VKAKGIRIRSATLGDYTFRPAAVVR--SAAELETKPDCT 75 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH-HH----HHHHCEEEEETTTCCEEECCSCEES--CGGGCSSCCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH-HH----HHhCCcEEeecCCCcEEEeeeeeEC--CHHHcCCCCCEE
Confidence 4678888885 3 556666677889999999542 32 333332210 01122211110001 111112378999
Q ss_pred EEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 200 LGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 200 ia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
+.+=-.+.. ..+++.+..++++++.++...
T Consensus 76 ilavK~~~~---~~~l~~l~~~l~~~t~Iv~~~ 105 (320)
T 3i83_A 76 LLCIKVVEG---ADRVGLLRDAVAPDTGIVLIS 105 (320)
T ss_dssp EECCCCCTT---CCHHHHHTTSCCTTCEEEEEC
T ss_pred EEecCCCCh---HHHHHHHHhhcCCCCEEEEeC
Confidence 987655543 346677777888887665443
No 485
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=59.59 E-value=9.2 Score=33.71 Aligned_cols=93 Identities=11% Similarity=0.025 Sum_probs=53.5
Q ss_pred ccCCCeEEEECCC--cCHHHHHHHH-cCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCC-C----C
Q 023543 120 LLHGKKIVELGSG--CGLVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-Q----D 190 (281)
Q Consensus 120 ~~~~~~VLELGcG--tG~~~i~~a~-~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~-~----~ 190 (281)
..+|++||-.|++ .|...+.+++ .|++|+++|. ++.++.+++ .+.. ..++..+... . .
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~g~~---------~~~~~~~~~~~~~~~~~ 226 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK----LGAA---------AGFNYKKEDFSEATLKF 226 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HTCS---------EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCc---------EEEecCChHHHHHHHHH
Confidence 3568899999952 3444444443 7899999998 666666632 2221 1123222100 0 0
Q ss_pred cCCCCCcEEEEccccCCCCcHHHHHHHHHHhhCCCcEEEEEE
Q 023543 191 LIQPLPDYVLGSDVIYSEGAVGDLLDTLLQLCGTQTTIFLAG 232 (281)
Q Consensus 191 ~~~~~fD~Iia~d~iy~~~~~~~ll~~l~~ll~~~g~~~l~~ 232 (281)
....++|+++.+--- ..+....++++++|++++..
T Consensus 227 ~~~~~~d~vi~~~G~-------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 227 TKGAGVNLILDCIGG-------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp TTTSCEEEEEESSCG-------GGHHHHHHHEEEEEEEEECC
T ss_pred hcCCCceEEEECCCc-------hHHHHHHHhccCCCEEEEEe
Confidence 112468988865432 13555677889999877654
No 486
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=59.49 E-value=9.9 Score=34.14 Aligned_cols=41 Identities=27% Similarity=0.412 Sum_probs=28.7
Q ss_pred ccCCCeEEEECCCc-CHHHHHHH-HcCCEEEEEec-hhHHHHHH
Q 023543 120 LLHGKKIVELGSGC-GLVGCIAA-LLGAQVILTDL-PDRLRLLK 160 (281)
Q Consensus 120 ~~~~~~VLELGcGt-G~~~i~~a-~~g~~V~~tD~-~~~l~~~~ 160 (281)
.+++++|+=+|+|. |...+..+ .+|++|+++|. +..++.++
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~ 212 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVE 212 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 35789999999874 44443333 37899999999 66655554
No 487
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=59.40 E-value=31 Score=28.48 Aligned_cols=79 Identities=15% Similarity=0.106 Sum_probs=47.3
Q ss_pred cCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc--
Q 023543 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-- 191 (281)
+++++||=.|++.| +|.. +++.|++|+++|. ++.++.+...+...+ .++.+...|..+.... .+
T Consensus 7 l~~k~vlVTGas~g-iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~ 79 (260)
T 2ae2_A 7 LEGCTALVTGGSRG-IGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG------FKVEASVCDLSSRSERQELMNT 79 (260)
T ss_dssp CTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHH
Confidence 57899999997655 4443 4457999999999 555555444443322 2466666665432110 00
Q ss_pred ----CCCCCcEEEEccccC
Q 023543 192 ----IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ----~~~~fD~Iia~d~iy 206 (281)
...++|+++.+--+.
T Consensus 80 ~~~~~~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 80 VANHFHGKLNILVNNAGIV 98 (260)
T ss_dssp HHHHTTTCCCEEEECCCCC
T ss_pred HHHHcCCCCCEEEECCCCC
Confidence 015789999865543
No 488
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=59.24 E-value=30 Score=29.09 Aligned_cols=82 Identities=22% Similarity=0.255 Sum_probs=47.6
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEechhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-Cc----
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DL---- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~---- 191 (281)
.++++++|=-|++.|+ ++..++..|++|+++|..+.++.+.+.+...+ .++.+...|..+.... .+
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~ 101 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGG------GSAEAVVADLADLEGAANVAEEL 101 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTT------CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHHHHHHHH
Confidence 4689999999987663 33344557999999997443333333333321 3566666665432110 00
Q ss_pred -CCCCCcEEEEccccCC
Q 023543 192 -IQPLPDYVLGSDVIYS 207 (281)
Q Consensus 192 -~~~~fD~Iia~d~iy~ 207 (281)
...++|+++.+.-+..
T Consensus 102 ~~~g~iD~lv~nAg~~~ 118 (273)
T 3uf0_A 102 AATRRVDVLVNNAGIIA 118 (273)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HhcCCCcEEEECCCCCC
Confidence 0147899998655543
No 489
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=59.19 E-value=59 Score=29.82 Aligned_cols=80 Identities=10% Similarity=0.025 Sum_probs=48.2
Q ss_pred CCeEEEECCCcCHHHHHHHH----cCCEEEEEec-hh---HHHHHHHHHHHhhc---CCCCCCceEEEEEecCCCCCCCc
Q 023543 123 GKKIVELGSGCGLVGCIAAL----LGAQVILTDL-PD---RLRLLKKNIENNLR---HGDLRGSAVVTELTWGDDPDQDL 191 (281)
Q Consensus 123 ~~~VLELGcGtG~~~i~~a~----~g~~V~~tD~-~~---~l~~~~~N~~~n~~---~~~~~~~i~~~~l~w~~~~~~~~ 191 (281)
.++||=.| |||.+|..+++ .|.+|++++. +. .+..+..++..... ......++.+...|..+.....
T Consensus 150 ~~~VLVTG-atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 150 LGNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CEEEEESC-TTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCeEEEEC-CccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 46899888 57888887775 3568999987 44 34444444433200 0000146888888876533332
Q ss_pred CCCCCcEEEEccc
Q 023543 192 IQPLPDYVLGSDV 204 (281)
Q Consensus 192 ~~~~fD~Iia~d~ 204 (281)
....+|+|+-+..
T Consensus 228 ~~~~~D~Vih~Aa 240 (508)
T 4f6l_B 228 LPENMDTIIHAGA 240 (508)
T ss_dssp CSSCCSEEEECCC
T ss_pred CccCCCEEEECCc
Confidence 3467899997544
No 490
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=58.79 E-value=38 Score=28.23 Aligned_cols=80 Identities=16% Similarity=0.098 Sum_probs=47.3
Q ss_pred ccCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHHHHHHHH-HHhhcCCCCCCceEEEEEecCCCCCC--Cc
Q 023543 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNI-ENNLRHGDLRGSAVVTELTWGDDPDQ--DL 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~~~~~N~-~~n~~~~~~~~~i~~~~l~w~~~~~~--~~ 191 (281)
.+++++||=.|++.| +|.. ++..|++|++++. ++.++.+...+ ...+ .++.+...|..+.... .+
T Consensus 18 ~l~~k~~lVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dl~~~~~v~~~~ 90 (267)
T 1vl8_A 18 DLRGRVALVTGGSRG-LGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG------VETMAFRCDVSNYEEVKKLL 90 (267)
T ss_dssp CCTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC------CCEEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC------CeEEEEEcCCCCHHHHHHHH
Confidence 468899999997655 4444 4457999999998 55555554444 2222 2455666665432110 00
Q ss_pred -----CCCCCcEEEEccccC
Q 023543 192 -----IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 -----~~~~fD~Iia~d~iy 206 (281)
.-.++|+++.+--+.
T Consensus 91 ~~~~~~~g~iD~lvnnAg~~ 110 (267)
T 1vl8_A 91 EAVKEKFGKLDTVVNAAGIN 110 (267)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCcC
Confidence 013689999765543
No 491
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=58.46 E-value=45 Score=30.23 Aligned_cols=36 Identities=25% Similarity=0.446 Sum_probs=25.0
Q ss_pred eEEEECCCc-C-HHHHHHHHcCCEEEEEec-hhHHHHHH
Q 023543 125 KIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLK 160 (281)
Q Consensus 125 ~VLELGcGt-G-~~~i~~a~~g~~V~~tD~-~~~l~~~~ 160 (281)
+|.=+|+|. | .++..+++.|.+|++.|. ++.++.++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~ 40 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN 40 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHh
Confidence 455678775 4 345566677999999999 66666544
No 492
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=58.43 E-value=13 Score=29.09 Aligned_cols=38 Identities=16% Similarity=0.186 Sum_probs=26.1
Q ss_pred cCCCeEEEECCCcCHHHHHHH----Hc-CCEEEEEec-hhHHHHHH
Q 023543 121 LHGKKIVELGSGCGLVGCIAA----LL-GAQVILTDL-PDRLRLLK 160 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a----~~-g~~V~~tD~-~~~l~~~~ 160 (281)
..+++|+=+||| .+|..++ .. |.+|+++|. ++.++.++
T Consensus 37 ~~~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~ 80 (183)
T 3c85_A 37 PGHAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHR 80 (183)
T ss_dssp CTTCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH
T ss_pred CCCCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHH
Confidence 456789988875 5554443 46 889999999 66655443
No 493
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=57.92 E-value=39 Score=27.61 Aligned_cols=78 Identities=14% Similarity=0.166 Sum_probs=46.3
Q ss_pred cCCCeEEEECCCcCHHHHHHH----HcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-CcC--
Q 023543 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DLI-- 192 (281)
Q Consensus 121 ~~~~~VLELGcGtG~~~i~~a----~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~~-- 192 (281)
+++++||=.|++ |-+|..++ ..|++|+++|. ++.++.+.+.+...+ .++.+...|..+.... ...
T Consensus 11 l~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~D~~~~~~~~~~~~~ 83 (260)
T 3awd_A 11 LDNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG------HDVSSVVMDVTNTESVQNAVRS 83 (260)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEEecCCCHHHHHHHHHH
Confidence 578999999965 44555444 46999999999 555554444444332 2466666665432110 000
Q ss_pred ----CCCCcEEEEcccc
Q 023543 193 ----QPLPDYVLGSDVI 205 (281)
Q Consensus 193 ----~~~fD~Iia~d~i 205 (281)
..++|+|+.+--+
T Consensus 84 ~~~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 84 VHEQEGRVDILVACAGI 100 (260)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 1368999976543
No 494
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=57.78 E-value=15 Score=32.70 Aligned_cols=41 Identities=39% Similarity=0.520 Sum_probs=28.3
Q ss_pred cCCCeEEEECCCc-CHHHHHHH-HcCCEEEEEec-hhHHHHHHH
Q 023543 121 LHGKKIVELGSGC-GLVGCIAA-LLGAQVILTDL-PDRLRLLKK 161 (281)
Q Consensus 121 ~~~~~VLELGcGt-G~~~i~~a-~~g~~V~~tD~-~~~l~~~~~ 161 (281)
+++++|+=+|+|. |...+.++ ..|++|+++|. ++.++.+++
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~ 208 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLET 208 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence 4568999999863 43333333 37899999999 666666653
No 495
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=57.75 E-value=33 Score=28.26 Aligned_cols=79 Identities=18% Similarity=0.163 Sum_probs=46.6
Q ss_pred ccCCCeEEEECCCcCHHHHHH----HHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc-
Q 023543 120 LLHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~~----a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~- 191 (281)
.+++++||=.|++.| +|..+ ++.|++|+++|. ++.++.+.+.+...+ .++.+...|..+..+. .+
T Consensus 11 ~l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~D~~~~~~~~~~~~ 83 (260)
T 2zat_A 11 PLENKVALVTASTDG-IGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG------LSVTGTVCHVGKAEDRERLVA 83 (260)
T ss_dssp TTTTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEEccCCCHHHHHHHHH
Confidence 367899999997654 45444 457999999999 555555544444332 2455666554432110 00
Q ss_pred ----CCCCCcEEEEcccc
Q 023543 192 ----IQPLPDYVLGSDVI 205 (281)
Q Consensus 192 ----~~~~fD~Iia~d~i 205 (281)
...++|+++.+--+
T Consensus 84 ~~~~~~g~iD~lv~~Ag~ 101 (260)
T 2zat_A 84 MAVNLHGGVDILVSNAAV 101 (260)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 01368999876544
No 496
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=57.68 E-value=10 Score=28.88 Aligned_cols=36 Identities=28% Similarity=0.394 Sum_probs=24.9
Q ss_pred ccCCCeEEEECCCcCHHHHH----HHHcCCEEEEEec-hhHHH
Q 023543 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLR 157 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~~~i~----~a~~g~~V~~tD~-~~~l~ 157 (281)
...+++|+=+||| .+|.. +...|.+|+++|. ++.++
T Consensus 16 ~~~~~~v~IiG~G--~iG~~la~~L~~~g~~V~vid~~~~~~~ 56 (155)
T 2g1u_A 16 KQKSKYIVIFGCG--RLGSLIANLASSSGHSVVVVDKNEYAFH 56 (155)
T ss_dssp -CCCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCGGGGG
T ss_pred ccCCCcEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence 4577899999875 44443 3346889999999 55543
No 497
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=57.68 E-value=13 Score=31.27 Aligned_cols=75 Identities=21% Similarity=0.265 Sum_probs=46.6
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC--Cc-C
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ--DL-I 192 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~--~~-~ 192 (281)
.|+||++|=-|++.|+ ++..+++.|++|+++|. .+.++.. ...++.....|..+...- .+ .
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~ 75 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP------------RHPRIRREELDITDSQRLQRLFEA 75 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC------------CCTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh------------hcCCeEEEEecCCCHHHHHHHHHh
Confidence 5799999999999884 44556678999999999 5443211 123566666654432110 00 1
Q ss_pred CCCCcEEEEccccC
Q 023543 193 QPLPDYVLGSDVIY 206 (281)
Q Consensus 193 ~~~fD~Iia~d~iy 206 (281)
-.+.|+++.+--+.
T Consensus 76 ~g~iDiLVNNAGi~ 89 (242)
T 4b79_A 76 LPRLDVLVNNAGIS 89 (242)
T ss_dssp CSCCSEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 25689988765443
No 498
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=57.51 E-value=31 Score=29.60 Aligned_cols=40 Identities=25% Similarity=0.269 Sum_probs=26.4
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCC-EEEEEec-hhHHHHHH
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGA-QVILTDL-PDRLRLLK 160 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~-~V~~tD~-~~~l~~~~ 160 (281)
..++++||=+|+| |. +...++..|+ +|+.++. ++..+.+.
T Consensus 123 ~l~~k~vlvlGaG-g~g~aia~~L~~~G~~~v~v~~R~~~~a~~la 167 (281)
T 3o8q_A 123 LLKGATILLIGAG-GAARGVLKPLLDQQPASITVTNRTFAKAEQLA 167 (281)
T ss_dssp CCTTCEEEEECCS-HHHHHHHHHHHTTCCSEEEEEESSHHHHHHHH
T ss_pred CccCCEEEEECch-HHHHHHHHHHHhcCCCeEEEEECCHHHHHHHH
Confidence 4689999999997 32 2233445785 8999998 55444333
No 499
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=57.30 E-value=17 Score=30.58 Aligned_cols=81 Identities=19% Similarity=0.216 Sum_probs=49.0
Q ss_pred ccCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-C-c--
Q 023543 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-D-L-- 191 (281)
Q Consensus 120 ~~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~-~-- 191 (281)
.++|+++|=-|++.|+ ++..+++.|++|+++|. ++.++.+.+.+...+ .++.+...|..+.... . +
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~ 96 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG------HDAEAVAFDVTSESEIIEAFAR 96 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT------CCEEECCCCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEEcCCCCHHHHHHHHHH
Confidence 4689999999976653 23344557999999999 666665555554432 2455555554332110 0 0
Q ss_pred ---CCCCCcEEEEccccC
Q 023543 192 ---IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 ---~~~~fD~Iia~d~iy 206 (281)
..++.|+++.+.-+.
T Consensus 97 ~~~~~g~iD~lv~nAg~~ 114 (271)
T 4ibo_A 97 LDEQGIDVDILVNNAGIQ 114 (271)
T ss_dssp HHHHTCCCCEEEECCCCC
T ss_pred HHHHCCCCCEEEECCCCC
Confidence 124689999866554
No 500
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=57.25 E-value=14 Score=31.39 Aligned_cols=80 Identities=24% Similarity=0.235 Sum_probs=47.7
Q ss_pred cCCCeEEEECCCcCH---HHHHHHHcCCEEEEEec-hhHHHHHHHHHHHhhcCCCCCCceEEEEEecCCCCCC-Cc----
Q 023543 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DL---- 191 (281)
Q Consensus 121 ~~~~~VLELGcGtG~---~~i~~a~~g~~V~~tD~-~~~l~~~~~N~~~n~~~~~~~~~i~~~~l~w~~~~~~-~~---- 191 (281)
+.+++||=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+.... .+
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~ 79 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG------GEAAALAGDVGDEALHEALVELA 79 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT------CCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHHH
Confidence 678999999987663 23344557999999999 666655554443322 3455555554332110 00
Q ss_pred --CCCCCcEEEEccccC
Q 023543 192 --IQPLPDYVLGSDVIY 206 (281)
Q Consensus 192 --~~~~fD~Iia~d~iy 206 (281)
.-+++|++|.+.-+.
T Consensus 80 ~~~~g~iD~lvnnAg~~ 96 (280)
T 3tox_A 80 VRRFGGLDTAFNNAGAL 96 (280)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 014689999866543
Done!