Query 023550
Match_columns 281
No_of_seqs 288 out of 1757
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 08:44:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023550.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023550hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xcm_C SGT1-like protein, cyto 99.9 6E-25 2.1E-29 160.2 9.7 92 172-263 1-92 (92)
2 1wh0_A Ubiquitin carboxyl-term 99.9 1.4E-24 4.9E-29 167.8 8.0 93 172-264 18-123 (134)
3 1rl1_A Suppressor of G2 allele 99.9 4.1E-24 1.4E-28 162.0 9.4 104 171-274 7-110 (114)
4 1x5m_A Calcyclin-binding prote 99.9 1.1E-23 3.8E-28 162.3 9.6 90 174-263 21-115 (127)
5 4gco_A Protein STI-1; structur 99.9 6.6E-21 2.3E-25 146.4 16.1 112 2-113 13-124 (126)
6 1ejf_A Progesterone receptor P 99.8 2.5E-21 8.6E-26 148.6 8.9 89 175-265 5-95 (125)
7 2kmw_A Uncharacterized protein 99.8 2E-21 7E-26 153.2 8.2 89 174-265 5-94 (150)
8 1wgv_A KIAA1068 protein; CS do 99.8 1.8E-20 6.1E-25 143.7 11.1 99 174-272 20-121 (124)
9 2hr2_A Hypothetical protein; a 99.8 4.6E-20 1.6E-24 146.7 11.0 120 1-120 10-152 (159)
10 3upv_A Heat shock protein STI1 99.8 1E-18 3.5E-23 132.8 14.6 116 2-117 4-125 (126)
11 2o30_A Nuclear movement protei 99.8 1.3E-19 4.3E-24 140.3 8.6 94 174-271 5-99 (131)
12 3rkv_A Putative peptidylprolyl 99.8 9.7E-19 3.3E-23 139.0 13.9 120 2-121 11-149 (162)
13 3sz7_A HSC70 cochaperone (SGT) 99.8 5.7E-18 1.9E-22 134.8 17.6 120 2-121 11-132 (164)
14 1wfi_A Nuclear distribution ge 99.8 5.7E-19 1.9E-23 136.7 11.0 96 175-273 9-109 (131)
15 2cg9_X CO-chaperone protein SB 99.8 5.7E-20 1.9E-24 142.5 4.8 91 174-266 7-113 (134)
16 3gyz_A Chaperone protein IPGC; 99.8 8.2E-18 2.8E-22 133.4 15.4 103 2-104 36-138 (151)
17 4gcn_A Protein STI-1; structur 99.8 9.3E-18 3.2E-22 128.7 14.1 111 2-113 8-125 (127)
18 3qor_A Nuclear migration prote 99.8 2.2E-18 7.4E-23 131.4 10.4 91 174-267 17-112 (121)
19 2vgx_A Chaperone SYCD; alterna 99.8 2E-17 7E-22 130.3 16.1 118 3-120 22-139 (148)
20 2xcb_A PCRH, regulatory protei 99.8 2.3E-17 7.9E-22 128.5 15.5 118 3-120 19-136 (142)
21 4ga2_A E3 SUMO-protein ligase 99.7 1.9E-17 6.4E-22 130.6 11.9 112 4-115 33-145 (150)
22 2rh0_A NUDC domain-containing 99.7 7.7E-18 2.6E-22 133.9 8.2 87 173-263 13-104 (157)
23 3q49_B STIP1 homology and U bo 99.7 2.2E-16 7.7E-21 120.8 15.0 119 2-120 9-132 (137)
24 2fbn_A 70 kDa peptidylprolyl i 99.7 5.8E-16 2E-20 126.9 16.7 121 2-122 38-174 (198)
25 1hxi_A PEX5, peroxisome target 99.7 3.1E-16 1.1E-20 119.2 13.6 102 4-105 19-120 (121)
26 3urz_A Uncharacterized protein 99.7 4.2E-16 1.4E-20 129.3 15.0 117 2-118 4-136 (208)
27 1elw_A TPR1-domain of HOP; HOP 99.7 1.3E-15 4.3E-20 112.4 16.0 114 2-115 4-117 (118)
28 2lni_A Stress-induced-phosphop 99.7 5.8E-16 2E-20 117.1 13.8 116 3-118 17-132 (133)
29 1p5q_A FKBP52, FK506-binding p 99.7 1.1E-15 3.7E-20 136.4 17.1 119 2-120 147-280 (336)
30 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 8.1E-16 2.8E-20 142.9 16.1 119 2-120 268-401 (457)
31 2vyi_A SGTA protein; chaperone 99.7 3E-15 1E-19 112.3 16.3 117 3-119 13-129 (131)
32 2xev_A YBGF; tetratricopeptide 99.7 1.2E-15 4.2E-20 115.4 14.2 115 1-115 1-121 (129)
33 2dba_A Smooth muscle cell asso 99.7 2.7E-15 9.1E-20 115.7 15.3 113 2-114 28-143 (148)
34 2pl2_A Hypothetical conserved 99.7 2.3E-15 7.8E-20 125.6 15.3 118 3-120 6-134 (217)
35 1a17_A Serine/threonine protei 99.6 7.9E-15 2.7E-19 115.2 17.0 114 2-115 13-126 (166)
36 4gyw_A UDP-N-acetylglucosamine 99.6 2.1E-15 7.3E-20 147.4 15.7 116 4-119 45-160 (723)
37 1ihg_A Cyclophilin 40; ppiase 99.6 2.1E-15 7.2E-20 136.5 14.4 119 2-120 223-357 (370)
38 1elr_A TPR2A-domain of HOP; HO 99.6 6.6E-15 2.3E-19 110.5 14.9 118 2-120 4-128 (131)
39 4ga2_A E3 SUMO-protein ligase 99.6 3.9E-16 1.3E-20 123.0 7.3 113 8-120 3-115 (150)
40 4i17_A Hypothetical protein; T 99.6 1.7E-14 5.7E-19 120.3 17.0 108 2-109 7-115 (228)
41 1na0_A Designed protein CTPR3; 99.6 3E-14 1E-18 105.8 16.2 114 3-116 10-123 (125)
42 2pl2_A Hypothetical conserved 99.6 1.3E-14 4.4E-19 121.0 15.1 117 3-120 40-167 (217)
43 2h6f_A Protein farnesyltransfe 99.6 5.2E-15 1.8E-19 134.5 13.7 116 4-119 99-215 (382)
44 4gyw_A UDP-N-acetylglucosamine 99.6 7.5E-15 2.6E-19 143.5 15.7 119 2-120 9-127 (723)
45 3vtx_A MAMA; tetratricopeptide 99.6 2.5E-14 8.6E-19 115.1 15.8 118 2-119 5-156 (184)
46 1zu2_A Mitochondrial import re 99.6 6.5E-15 2.2E-19 116.8 11.9 107 12-118 12-139 (158)
47 2h6f_A Protein farnesyltransfe 99.6 6.4E-15 2.2E-19 133.9 13.0 115 2-116 131-246 (382)
48 2if4_A ATFKBP42; FKBP-like, al 99.6 2.2E-15 7.5E-20 134.6 8.5 118 2-119 179-313 (338)
49 2c2l_A CHIP, carboxy terminus 99.6 2.2E-14 7.6E-19 124.6 14.5 102 2-103 4-105 (281)
50 4i17_A Hypothetical protein; T 99.6 4.5E-14 1.5E-18 117.6 15.2 117 4-120 44-169 (228)
51 2kck_A TPR repeat; tetratricop 99.6 2E-14 6.9E-19 105.0 11.1 102 3-104 7-111 (112)
52 3urz_A Uncharacterized protein 99.6 1.6E-13 5.4E-18 113.6 16.8 106 8-114 60-200 (208)
53 3k9i_A BH0479 protein; putativ 99.6 6E-15 2E-19 110.8 7.4 101 14-114 2-105 (117)
54 2e2e_A Formate-dependent nitri 99.6 1.2E-13 4.1E-18 110.6 15.4 113 3-115 45-160 (177)
55 3vtx_A MAMA; tetratricopeptide 99.5 2.5E-13 8.6E-18 109.2 15.8 102 3-104 74-175 (184)
56 3gyz_A Chaperone protein IPGC; 99.5 1.1E-14 3.8E-19 115.3 6.3 107 14-120 14-120 (151)
57 1wao_1 Serine/threonine protei 99.5 3.4E-14 1.2E-18 132.7 10.4 115 3-117 7-121 (477)
58 3qky_A Outer membrane assembly 99.5 2.6E-13 8.9E-18 115.5 15.0 106 2-107 15-134 (261)
59 2fo7_A Synthetic consensus TPR 99.5 4.8E-13 1.6E-17 100.2 14.6 117 2-118 1-117 (136)
60 1hh8_A P67PHOX, NCF-2, neutrop 99.5 7.2E-13 2.5E-17 108.7 16.8 102 3-104 38-155 (213)
61 2l6j_A TPR repeat-containing p 99.5 2.7E-14 9.2E-19 104.9 6.5 95 2-96 4-104 (111)
62 3uq3_A Heat shock protein STI1 99.5 3.3E-13 1.1E-17 113.0 14.1 111 3-113 140-256 (258)
63 1xnf_A Lipoprotein NLPI; TPR, 99.5 8.6E-13 3E-17 111.8 16.3 111 3-113 44-154 (275)
64 1hh8_A P67PHOX, NCF-2, neutrop 99.5 4.8E-13 1.6E-17 109.8 14.0 115 3-120 7-137 (213)
65 3as5_A MAMA; tetratricopeptide 99.5 1.4E-12 4.7E-17 103.4 15.6 116 4-119 44-159 (186)
66 4abn_A Tetratricopeptide repea 99.5 5.3E-13 1.8E-17 124.3 14.1 118 3-120 171-308 (474)
67 3ieg_A DNAJ homolog subfamily 99.5 2.8E-12 9.7E-17 112.2 17.4 116 5-120 237-356 (359)
68 3as5_A MAMA; tetratricopeptide 99.5 1.1E-12 3.9E-17 103.9 13.5 118 3-120 9-126 (186)
69 2vsy_A XCC0866; transferase, g 99.5 1.1E-12 3.9E-17 124.3 15.8 116 2-117 23-138 (568)
70 2yhc_A BAMD, UPF0169 lipoprote 99.5 2.1E-12 7.2E-17 107.9 15.5 107 2-108 4-134 (225)
71 1fch_A Peroxisomal targeting s 99.4 1.3E-12 4.4E-17 115.6 14.9 118 3-120 218-346 (368)
72 2kat_A Uncharacterized protein 99.4 1.6E-12 5.3E-17 96.8 12.9 102 19-120 2-105 (115)
73 2pzi_A Probable serine/threoni 99.4 2.5E-13 8.5E-18 132.1 10.8 117 3-120 434-550 (681)
74 3uq3_A Heat shock protein STI1 99.4 1.2E-12 4.2E-17 109.5 13.7 119 2-120 79-223 (258)
75 4abn_A Tetratricopeptide repea 99.4 8.8E-13 3E-17 122.8 13.8 115 2-117 102-226 (474)
76 4eqf_A PEX5-related protein; a 99.4 1.2E-12 4E-17 116.3 13.9 118 3-120 214-343 (365)
77 2q7f_A YRRB protein; TPR, prot 99.4 2.4E-12 8.1E-17 107.1 15.0 109 6-114 95-203 (243)
78 2q7f_A YRRB protein; TPR, prot 99.4 3.7E-12 1.3E-16 105.8 16.1 118 3-120 58-175 (243)
79 3ieg_A DNAJ homolog subfamily 99.4 2.8E-12 9.4E-17 112.3 15.8 110 2-111 3-115 (359)
80 3qou_A Protein YBBN; thioredox 99.4 1.7E-12 5.9E-17 112.9 14.1 118 3-120 118-271 (287)
81 4gco_A Protein STI-1; structur 99.4 4.6E-13 1.6E-17 102.3 9.1 94 27-120 4-97 (126)
82 3u4t_A TPR repeat-containing p 99.4 1.8E-12 6.2E-17 109.9 13.6 117 3-119 75-191 (272)
83 2vq2_A PILW, putative fimbrial 99.4 4.6E-12 1.6E-16 103.8 14.8 112 4-115 10-124 (225)
84 3qky_A Outer membrane assembly 99.4 2.7E-12 9.3E-17 109.2 13.9 116 2-117 52-198 (261)
85 3u4t_A TPR repeat-containing p 99.4 1E-12 3.6E-17 111.4 11.1 117 3-120 4-124 (272)
86 4eqf_A PEX5-related protein; a 99.4 1.9E-12 6.5E-17 114.9 13.0 115 6-120 181-297 (365)
87 2vgx_A Chaperone SYCD; alterna 99.4 3.7E-13 1.3E-17 105.7 7.4 99 22-120 7-105 (148)
88 2pzi_A Probable serine/threoni 99.4 5.1E-13 1.8E-17 129.9 10.0 112 2-114 467-578 (681)
89 2r5s_A Uncharacterized protein 99.4 2.3E-12 7.9E-17 103.4 12.2 116 4-119 8-159 (176)
90 2vq2_A PILW, putative fimbrial 99.4 7.5E-12 2.6E-16 102.4 15.5 117 4-120 44-163 (225)
91 2ho1_A Type 4 fimbrial biogene 99.4 5.8E-12 2E-16 105.7 15.0 115 4-118 73-189 (252)
92 2fo7_A Synthetic consensus TPR 99.4 7.6E-12 2.6E-16 93.5 13.9 101 3-103 36-136 (136)
93 2ho1_A Type 4 fimbrial biogene 99.4 3.6E-12 1.2E-16 107.0 13.3 118 2-119 37-156 (252)
94 1w3b_A UDP-N-acetylglucosamine 99.4 3.8E-12 1.3E-16 114.1 13.8 116 3-118 238-353 (388)
95 3cv0_A Peroxisome targeting si 99.4 5.9E-12 2E-16 109.0 14.2 118 3-120 173-302 (327)
96 2gw1_A Mitochondrial precursor 99.4 1.1E-11 3.9E-16 114.1 16.7 104 2-106 6-109 (514)
97 2y4t_A DNAJ homolog subfamily 99.4 1.3E-11 4.3E-16 112.3 16.6 109 2-110 26-137 (450)
98 1w3b_A UDP-N-acetylglucosamine 99.4 8.3E-12 2.9E-16 111.8 14.9 118 3-120 204-321 (388)
99 2y4t_A DNAJ homolog subfamily 99.4 1.6E-11 5.6E-16 111.5 16.9 116 5-120 260-379 (450)
100 3hym_B Cell division cycle pro 99.4 1E-11 3.4E-16 107.7 14.8 117 3-119 91-208 (330)
101 2e2e_A Formate-dependent nitri 99.4 1E-12 3.4E-17 105.2 7.5 113 8-120 16-131 (177)
102 2yhc_A BAMD, UPF0169 lipoprote 99.4 6.6E-12 2.3E-16 104.9 12.8 118 3-120 42-200 (225)
103 3hym_B Cell division cycle pro 99.4 1.3E-11 4.4E-16 107.0 14.8 117 4-120 161-286 (330)
104 2xcb_A PCRH, regulatory protei 99.3 1.8E-12 6.3E-17 100.4 7.9 98 23-120 5-102 (142)
105 1fch_A Peroxisomal targeting s 99.3 1.2E-11 4E-16 109.4 14.2 105 3-107 65-169 (368)
106 2kc7_A BFR218_protein; tetratr 99.3 3.3E-12 1.1E-16 92.2 8.8 92 5-104 3-95 (99)
107 1na3_A Designed protein CTPR2; 99.3 2.4E-11 8.4E-16 85.6 12.1 79 5-83 12-90 (91)
108 3mkr_A Coatomer subunit epsilo 99.3 2.4E-11 8.1E-16 106.0 14.4 113 4-116 132-246 (291)
109 3fp2_A TPR repeat-containing p 99.3 9E-12 3.1E-16 115.7 11.5 103 2-105 25-127 (537)
110 3mkr_A Coatomer subunit epsilo 99.3 4E-11 1.4E-15 104.5 14.8 100 13-112 177-277 (291)
111 3cv0_A Peroxisome targeting si 99.3 2.6E-11 8.8E-16 105.0 13.5 108 3-110 22-129 (327)
112 1p5q_A FKBP52, FK506-binding p 99.3 3.8E-11 1.3E-15 106.8 14.0 96 2-97 196-292 (336)
113 1a17_A Serine/threonine protei 99.3 7.5E-11 2.6E-15 92.1 13.8 97 3-99 48-146 (166)
114 3fp2_A TPR repeat-containing p 99.3 2.6E-11 9.1E-16 112.5 12.7 117 4-120 278-394 (537)
115 2vsy_A XCC0866; transferase, g 99.3 6.7E-11 2.3E-15 112.0 14.8 103 3-105 58-163 (568)
116 1xnf_A Lipoprotein NLPI; TPR, 99.3 2E-11 6.9E-16 103.3 10.1 109 12-120 15-127 (275)
117 1qqe_A Vesicular transport pro 99.2 4E-11 1.4E-15 104.2 11.6 118 2-119 77-214 (292)
118 3ma5_A Tetratricopeptide repea 99.2 6E-11 2.1E-15 86.4 10.5 75 31-105 2-76 (100)
119 3upv_A Heat shock protein STI1 99.2 4.3E-11 1.5E-15 90.2 9.8 87 34-120 2-88 (126)
120 4g1t_A Interferon-induced prot 99.2 2.4E-10 8.2E-15 104.7 16.6 118 3-120 52-188 (472)
121 2l6j_A TPR repeat-containing p 99.2 1.2E-10 4.1E-15 85.0 11.5 86 35-120 3-94 (111)
122 4gcn_A Protein STI-1; structur 99.2 4.6E-11 1.6E-15 91.0 9.5 85 35-119 7-91 (127)
123 1qqe_A Vesicular transport pro 99.2 5.2E-11 1.8E-15 103.5 10.9 103 3-105 118-234 (292)
124 3edt_B KLC 2, kinesin light ch 99.2 4.1E-11 1.4E-15 101.2 9.8 118 3-120 44-185 (283)
125 2xpi_A Anaphase-promoting comp 99.2 1.6E-10 5.6E-15 108.9 14.8 116 4-119 443-565 (597)
126 1na3_A Designed protein CTPR2; 99.2 1E-10 3.6E-15 82.3 10.3 84 34-117 7-90 (91)
127 2xpi_A Anaphase-promoting comp 99.2 2.5E-10 8.5E-15 107.6 15.3 117 4-120 375-491 (597)
128 2ond_A Cleavage stimulation fa 99.2 2.2E-10 7.4E-15 100.1 12.6 113 4-116 101-215 (308)
129 1hxi_A PEX5, peroxisome target 99.2 2.8E-10 9.6E-15 85.9 11.6 83 38-120 19-101 (121)
130 4a1s_A PINS, partner of inscut 99.2 1.8E-10 6.3E-15 103.4 11.8 117 3-119 49-181 (411)
131 3sz7_A HSC70 cochaperone (SGT) 99.2 1.5E-10 5.3E-15 91.4 9.9 89 32-120 7-95 (164)
132 1kt0_A FKBP51, 51 kDa FK506-bi 99.2 2.2E-10 7.4E-15 106.2 12.3 91 2-92 317-407 (457)
133 2gw1_A Mitochondrial precursor 99.2 2.2E-10 7.7E-15 105.4 12.4 111 4-114 374-493 (514)
134 3q49_B STIP1 homology and U bo 99.2 3.3E-10 1.1E-14 86.0 11.3 91 30-120 3-93 (137)
135 2vyi_A SGTA protein; chaperone 99.1 3.6E-10 1.2E-14 84.0 11.1 84 3-86 47-130 (131)
136 1wao_1 Serine/threonine protei 99.1 8.3E-11 2.8E-15 109.7 9.2 102 2-103 40-154 (477)
137 2ond_A Cleavage stimulation fa 99.1 9E-10 3.1E-14 96.2 15.3 106 3-108 51-172 (308)
138 2fbn_A 70 kDa peptidylprolyl i 99.1 3.3E-10 1.1E-14 92.3 11.6 94 3-96 89-183 (198)
139 1dce_A Protein (RAB geranylger 99.1 7.4E-10 2.5E-14 105.4 15.6 116 3-118 64-192 (567)
140 3rkv_A Putative peptidylprolyl 99.1 3.2E-10 1.1E-14 89.3 10.9 86 3-88 64-150 (162)
141 3ro2_A PINS homolog, G-protein 99.1 4.2E-10 1.4E-14 96.9 12.5 117 3-119 6-138 (338)
142 1pc2_A Mitochondria fission pr 99.1 6.2E-10 2.1E-14 87.3 11.8 105 16-120 12-121 (152)
143 2if4_A ATFKBP42; FKBP-like, al 99.1 6.8E-11 2.3E-15 105.3 6.9 102 4-105 232-334 (338)
144 2lni_A Stress-induced-phosphop 99.1 5.1E-10 1.7E-14 83.8 10.8 83 3-85 51-133 (133)
145 2kck_A TPR repeat; tetratricop 99.1 1.2E-10 4.1E-15 84.5 6.9 88 32-119 2-92 (112)
146 3edt_B KLC 2, kinesin light ch 99.1 5.4E-10 1.8E-14 94.2 12.0 97 3-99 86-198 (283)
147 3sf4_A G-protein-signaling mod 99.1 4.4E-10 1.5E-14 100.1 11.9 118 2-119 9-142 (406)
148 1ouv_A Conserved hypothetical 99.1 3E-09 1E-13 90.5 16.1 108 2-115 6-121 (273)
149 3k9i_A BH0479 protein; putativ 99.1 6.9E-10 2.4E-14 82.7 10.2 72 3-74 28-99 (117)
150 1dce_A Protein (RAB geranylger 99.1 1.3E-09 4.5E-14 103.7 13.9 114 3-116 108-238 (567)
151 1ihg_A Cyclophilin 40; ppiase 99.1 1.3E-09 4.4E-14 98.4 13.1 90 3-92 274-363 (370)
152 2hr2_A Hypothetical protein; a 99.1 5.6E-10 1.9E-14 88.4 9.3 85 36-120 11-118 (159)
153 3dra_A Protein farnesyltransfe 99.1 2E-09 6.8E-14 94.7 13.8 117 3-119 104-235 (306)
154 3ro3_A PINS homolog, G-protein 99.1 4.9E-10 1.7E-14 86.2 8.6 100 2-101 9-120 (164)
155 3nf1_A KLC 1, kinesin light ch 99.1 4.2E-10 1.5E-14 96.5 9.1 118 3-120 70-211 (311)
156 2kc7_A BFR218_protein; tetratr 99.1 1.1E-09 3.8E-14 78.6 9.7 69 39-107 3-72 (99)
157 2c2l_A CHIP, carboxy terminus 99.1 7.7E-10 2.6E-14 95.7 10.5 115 3-117 39-182 (281)
158 3ulq_A Response regulator aspa 99.0 4.9E-10 1.7E-14 100.5 9.4 116 3-118 144-278 (383)
159 3dra_A Protein farnesyltransfe 99.0 1.8E-09 6.1E-14 95.0 12.6 114 3-116 68-192 (306)
160 3ma5_A Tetratricopeptide repea 99.0 1.4E-09 4.8E-14 79.0 10.0 83 2-84 7-91 (100)
161 3nf1_A KLC 1, kinesin light ch 99.0 6.2E-10 2.1E-14 95.5 9.4 97 3-99 112-224 (311)
162 3u3w_A Transcriptional activat 99.0 5.9E-10 2E-14 96.6 9.1 97 4-100 157-267 (293)
163 3gw4_A Uncharacterized protein 99.0 8.5E-10 2.9E-14 89.1 9.1 98 3-100 27-137 (203)
164 2ifu_A Gamma-SNAP; membrane fu 99.0 9.5E-10 3.3E-14 96.1 9.7 101 3-105 117-229 (307)
165 2qfc_A PLCR protein; TPR, HTH, 99.0 1.7E-09 5.8E-14 93.6 11.0 98 3-100 156-267 (293)
166 2r5s_A Uncharacterized protein 99.0 3.8E-09 1.3E-13 84.4 12.2 80 19-98 91-172 (176)
167 3bee_A Putative YFRE protein; 99.0 6.2E-09 2.1E-13 75.1 12.0 78 32-109 2-82 (93)
168 3dss_A Geranylgeranyl transfer 99.0 9.4E-09 3.2E-13 91.2 15.6 111 3-113 109-236 (331)
169 1na0_A Designed protein CTPR3; 99.0 5.7E-09 2E-13 76.7 12.1 82 3-84 44-125 (125)
170 4f3v_A ESX-1 secretion system 99.0 3.2E-09 1.1E-13 92.0 12.2 103 4-107 137-244 (282)
171 2qfc_A PLCR protein; TPR, HTH, 99.0 4.6E-09 1.6E-13 90.9 13.3 114 5-118 118-250 (293)
172 1ouv_A Conserved hypothetical 99.0 1.5E-08 5.2E-13 86.1 15.9 106 3-114 39-156 (273)
173 3ro3_A PINS homolog, G-protein 99.0 2.3E-09 7.9E-14 82.4 9.8 99 3-101 50-160 (164)
174 3dss_A Geranylgeranyl transfer 99.0 1.4E-08 4.8E-13 90.0 16.0 115 3-117 65-192 (331)
175 4g1t_A Interferon-induced prot 99.0 9.7E-09 3.3E-13 93.9 15.5 114 4-117 138-294 (472)
176 3u3w_A Transcriptional activat 99.0 1.2E-09 4.1E-14 94.6 8.7 112 7-118 120-250 (293)
177 3ulq_A Response regulator aspa 99.0 9.2E-10 3.1E-14 98.6 8.1 115 5-119 106-239 (383)
178 2dba_A Smooth muscle cell asso 99.0 6.2E-09 2.1E-13 79.4 11.2 90 31-120 23-115 (148)
179 1elw_A TPR1-domain of HOP; HOP 99.0 5.9E-09 2E-13 75.9 10.5 86 35-120 3-88 (118)
180 2ifu_A Gamma-SNAP; membrane fu 98.9 1.1E-09 3.9E-14 95.6 7.3 101 3-104 77-189 (307)
181 3sf4_A G-protein-signaling mod 98.9 2.9E-09 9.8E-14 94.8 9.9 118 3-120 228-363 (406)
182 3qou_A Protein YBBN; thioredox 98.9 4.9E-09 1.7E-13 90.9 11.1 89 10-98 193-283 (287)
183 3q7a_A Farnesyltransferase alp 98.9 1.1E-08 3.8E-13 91.3 13.5 109 5-113 91-210 (349)
184 3q15_A PSP28, response regulat 98.9 1E-08 3.4E-13 91.8 13.3 101 2-102 182-293 (378)
185 3q7a_A Farnesyltransferase alp 98.9 2.4E-08 8.2E-13 89.0 15.5 110 11-120 62-175 (349)
186 1zu2_A Mitochondrial import re 98.9 4.2E-09 1.4E-13 83.3 9.2 69 2-70 36-125 (158)
187 2kat_A Uncharacterized protein 98.9 1.1E-08 3.7E-13 75.6 11.0 83 3-85 20-104 (115)
188 3q15_A PSP28, response regulat 98.9 4.6E-09 1.6E-13 94.0 10.6 119 2-120 141-277 (378)
189 2xev_A YBGF; tetratricopeptide 98.9 1.7E-08 5.7E-13 75.5 11.9 82 3-84 40-124 (129)
190 3rjv_A Putative SEL1 repeat pr 98.9 1.2E-08 4E-13 84.4 11.5 94 3-101 19-120 (212)
191 3rjv_A Putative SEL1 repeat pr 98.9 1.1E-08 3.7E-13 84.6 11.2 109 3-115 51-173 (212)
192 3ro2_A PINS homolog, G-protein 98.9 3.1E-09 1.1E-13 91.4 6.9 117 3-119 184-318 (338)
193 2v5f_A Prolyl 4-hydroxylase su 98.9 3.1E-08 1.1E-12 72.6 11.2 76 2-77 5-87 (104)
194 4a1s_A PINS, partner of inscut 98.8 4.1E-09 1.4E-13 94.5 7.3 98 3-100 87-213 (411)
195 3n71_A Histone lysine methyltr 98.8 3.4E-08 1.2E-12 92.3 13.2 116 4-119 311-450 (490)
196 4f3v_A ESX-1 secretion system 98.8 1.2E-08 4.1E-13 88.3 9.2 115 5-120 105-224 (282)
197 3gw4_A Uncharacterized protein 98.8 1.3E-08 4.5E-13 82.0 8.7 117 3-120 67-196 (203)
198 2ooe_A Cleavage stimulation fa 98.8 3E-08 1E-12 92.9 12.4 114 3-116 322-437 (530)
199 1elr_A TPR2A-domain of HOP; HO 98.8 1.1E-08 3.9E-13 75.8 7.7 85 35-119 3-94 (131)
200 3qww_A SET and MYND domain-con 98.8 2.8E-08 9.7E-13 91.4 11.2 107 6-112 302-429 (433)
201 1nzn_A CGI-135 protein, fissio 98.8 1E-07 3.6E-12 72.0 12.3 106 14-119 13-123 (126)
202 2ooe_A Cleavage stimulation fa 98.8 1.1E-07 3.9E-12 88.9 15.2 106 3-108 273-394 (530)
203 2v5f_A Prolyl 4-hydroxylase su 98.8 1.2E-07 4.1E-12 69.4 12.2 86 35-120 4-96 (104)
204 3qwp_A SET and MYND domain-con 98.7 1.4E-07 4.7E-12 86.7 13.4 108 4-111 289-417 (429)
205 3ly7_A Transcriptional activat 98.6 6.5E-07 2.2E-11 80.0 14.9 101 3-104 197-344 (372)
206 1klx_A Cysteine rich protein B 98.6 4.2E-07 1.4E-11 70.0 11.8 89 8-100 31-127 (138)
207 1hz4_A MALT regulatory protein 98.6 1.9E-07 6.5E-12 82.8 10.8 98 5-102 56-167 (373)
208 2xm6_A Protein corresponding t 98.5 4.6E-07 1.6E-11 83.9 11.8 106 4-113 330-449 (490)
209 1hz4_A MALT regulatory protein 98.5 5.3E-07 1.8E-11 79.9 11.6 97 4-100 95-204 (373)
210 3n71_A Histone lysine methyltr 98.5 2.7E-07 9.3E-12 86.1 8.7 99 2-100 351-465 (490)
211 2xm6_A Protein corresponding t 98.5 3.2E-06 1.1E-10 78.2 15.9 104 4-113 41-156 (490)
212 3e4b_A ALGK; tetratricopeptide 98.5 1.5E-06 5.2E-11 80.0 13.4 106 4-114 178-293 (452)
213 3bee_A Putative YFRE protein; 98.5 9.6E-07 3.3E-11 63.4 8.9 68 2-69 6-76 (93)
214 3mv2_B Coatomer subunit epsilo 98.4 3.2E-06 1.1E-10 74.0 12.8 99 4-102 102-210 (310)
215 1pc2_A Mitochondria fission pr 98.4 1.3E-06 4.5E-11 68.3 9.2 78 3-80 33-115 (152)
216 3o48_A Mitochondria fission 1 98.4 7E-06 2.4E-10 62.3 12.6 101 19-120 24-128 (134)
217 3e4b_A ALGK; tetratricopeptide 98.4 2.6E-06 9E-11 78.4 12.4 99 6-113 217-327 (452)
218 3u64_A Protein TP_0956; tetrat 98.4 1.9E-06 6.5E-11 74.3 10.6 87 17-103 178-273 (301)
219 1klx_A Cysteine rich protein B 98.4 4.3E-06 1.5E-10 64.2 11.2 93 15-115 8-104 (138)
220 1y8m_A FIS1; mitochondria, unk 98.3 2.3E-05 7.7E-10 60.2 14.3 88 33-120 36-127 (144)
221 2k8q_A Protein SHQ1; beta-sand 98.3 6.4E-07 2.2E-11 67.9 5.0 81 175-260 5-91 (134)
222 3gla_A Low molecular weight he 98.3 4E-06 1.4E-10 60.9 9.2 78 175-252 6-98 (100)
223 1b89_A Protein (clathrin heavy 98.2 2.8E-06 9.5E-11 77.8 8.6 104 4-117 124-254 (449)
224 1xi4_A Clathrin heavy chain; a 98.2 8E-06 2.7E-10 83.7 12.4 105 4-116 1197-1326(1630)
225 3mv2_B Coatomer subunit epsilo 98.2 7.4E-06 2.5E-10 71.7 10.7 100 8-112 182-295 (310)
226 4fei_A Heat shock protein-rela 98.2 8.5E-06 2.9E-10 59.5 9.3 79 175-253 8-96 (102)
227 4b4t_Q 26S proteasome regulato 98.2 8.2E-06 2.8E-10 73.4 11.2 98 4-101 57-206 (434)
228 3eud_A Protein SHQ1; CS domain 98.2 8.4E-06 2.9E-10 59.7 8.4 81 175-260 19-105 (115)
229 3ffl_A Anaphase-promoting comp 98.1 1.2E-05 4.2E-10 63.3 9.0 93 4-96 22-148 (167)
230 1xi4_A Clathrin heavy chain; a 98.1 3E-05 1E-09 79.5 13.4 89 3-96 1106-1221(1630)
231 3aab_A Putative uncharacterize 98.1 1.8E-05 6.1E-10 59.8 9.0 79 175-253 26-117 (123)
232 4b4t_Q 26S proteasome regulato 98.0 1.8E-05 6E-10 71.2 9.0 97 3-99 136-245 (434)
233 2wj5_A Heat shock protein beta 98.0 3.6E-05 1.2E-09 56.0 8.6 78 176-253 4-90 (101)
234 1gme_A Heat shock protein 16.9 97.9 5.5E-05 1.9E-09 59.2 9.1 80 174-253 44-139 (151)
235 4eld_A MJ16.5-P1, small heat s 97.9 7.3E-05 2.5E-09 59.1 9.1 78 176-253 59-152 (161)
236 1nzn_A CGI-135 protein, fissio 97.8 0.00016 5.3E-09 54.6 8.9 78 3-80 36-118 (126)
237 3qwp_A SET and MYND domain-con 97.7 7.3E-05 2.5E-09 68.5 7.9 81 2-82 329-425 (429)
238 3l1e_A Alpha-crystallin A chai 97.7 0.00014 4.9E-09 53.2 7.9 78 176-253 5-91 (106)
239 3u64_A Protein TP_0956; tetrat 97.7 0.00048 1.6E-08 59.4 12.2 81 32-112 148-247 (301)
240 3q9p_A Heat shock protein beta 97.6 0.0004 1.4E-08 48.7 9.2 73 179-251 3-84 (85)
241 3qww_A SET and MYND domain-con 97.6 7E-05 2.4E-09 68.7 6.7 71 2-72 340-423 (433)
242 3ly7_A Transcriptional activat 97.6 0.00046 1.6E-08 61.6 11.0 68 4-72 279-346 (372)
243 3o48_A Mitochondria fission 1 97.5 0.00095 3.2E-08 50.5 10.4 81 3-83 41-125 (134)
244 1y8m_A FIS1; mitochondria, unk 97.5 0.0013 4.3E-08 50.5 11.1 78 3-80 40-121 (144)
245 2y1y_A Alpha-crystallin B chai 97.5 0.00026 8.9E-09 50.2 6.5 74 180-253 3-85 (90)
246 4e6h_A MRNA 3'-END-processing 97.5 0.00094 3.2E-08 64.6 12.1 60 5-64 346-406 (679)
247 4h7y_A Dual specificity protei 97.4 0.0032 1.1E-07 48.7 12.0 102 3-105 14-129 (161)
248 1b89_A Protein (clathrin heavy 97.4 0.00068 2.3E-08 62.1 9.8 113 4-118 150-296 (449)
249 2ff4_A Probable regulatory pro 97.4 0.0028 9.5E-08 57.1 13.6 95 4-98 117-233 (388)
250 4e6h_A MRNA 3'-END-processing 97.3 0.0011 3.9E-08 64.1 10.9 98 5-102 437-536 (679)
251 2klr_A Alpha-crystallin B chai 97.3 0.00049 1.7E-08 55.0 7.0 78 176-253 66-152 (175)
252 3ffl_A Anaphase-promoting comp 97.1 0.0025 8.6E-08 50.1 8.4 77 3-80 64-165 (167)
253 2bol_A TSP36, small heat shock 96.9 0.0038 1.3E-07 54.5 8.9 80 174-253 99-190 (314)
254 4gns_B Protein CSD3, chitin bi 96.9 0.0024 8.3E-08 62.2 8.3 61 37-97 338-398 (754)
255 2uy1_A Cleavage stimulation fa 96.7 0.032 1.1E-06 51.7 14.2 101 4-106 215-356 (493)
256 1zbp_A Hypothetical protein VP 96.3 0.062 2.1E-06 45.6 12.2 63 9-71 4-66 (273)
257 2uy1_A Cleavage stimulation fa 96.2 0.082 2.8E-06 48.9 13.9 91 5-96 289-380 (493)
258 3txn_A 26S proteasome regulato 95.9 0.073 2.5E-06 47.9 11.4 93 7-99 104-210 (394)
259 4gns_B Protein CSD3, chitin bi 95.9 0.022 7.5E-07 55.5 8.4 58 4-61 339-396 (754)
260 4b4t_R RPN7, 26S proteasome re 95.9 0.044 1.5E-06 49.9 10.0 99 4-102 133-240 (429)
261 3kae_A CDC27, possible protein 95.8 0.26 8.8E-06 39.0 12.6 91 7-102 38-146 (242)
262 4g26_A Pentatricopeptide repea 95.4 0.32 1.1E-05 45.1 14.3 102 5-106 108-213 (501)
263 1zbp_A Hypothetical protein VP 94.6 0.14 4.9E-06 43.3 8.4 64 44-107 5-68 (273)
264 2ff4_A Probable regulatory pro 94.4 0.16 5.6E-06 45.4 9.0 60 5-64 174-233 (388)
265 1ya0_A SMG-7 transcript varian 94.1 0.42 1.4E-05 44.3 11.3 77 39-115 155-231 (497)
266 4h7y_A Dual specificity protei 94.1 0.44 1.5E-05 36.8 9.4 71 13-84 71-141 (161)
267 4b4t_P 26S proteasome regulato 94.0 0.71 2.4E-05 42.1 12.6 94 6-99 141-247 (445)
268 1ya0_A SMG-7 transcript varian 93.9 0.34 1.2E-05 44.9 10.3 77 5-81 155-231 (497)
269 2bol_A TSP36, small heat shock 93.6 0.25 8.6E-06 42.9 8.3 71 181-251 231-313 (314)
270 4g26_A Pentatricopeptide repea 93.3 1.4 4.7E-05 40.8 13.3 89 16-104 84-176 (501)
271 3mkq_A Coatomer beta'-subunit; 93.0 0.84 2.9E-05 43.9 12.0 83 9-96 659-762 (814)
272 3mkq_B Coatomer subunit alpha; 93.0 0.61 2.1E-05 36.9 9.0 88 5-97 8-116 (177)
273 4fhn_B Nucleoporin NUP120; pro 92.6 0.49 1.7E-05 48.4 10.0 93 5-97 845-965 (1139)
274 3kae_A CDC27, possible protein 91.3 2.5 8.6E-05 33.4 10.3 89 1-97 1-89 (242)
275 3mkq_A Coatomer beta'-subunit; 90.3 2.8 9.7E-05 40.1 12.3 89 4-103 683-779 (814)
276 2w2u_A Hypothetical P60 katani 89.8 1.4 4.8E-05 30.2 7.0 30 2-31 19-48 (83)
277 2v6y_A AAA family ATPase, P60 89.4 1.6 5.5E-05 29.8 7.1 29 3-31 12-40 (83)
278 3spa_A Mtrpol, DNA-directed RN 88.8 8.4 0.00029 38.9 14.2 94 5-100 130-231 (1134)
279 4b4t_S RPN3, 26S proteasome re 87.7 1.8 6E-05 40.2 8.2 69 36-104 231-304 (523)
280 3txn_A 26S proteasome regulato 87.4 9.8 0.00033 33.9 12.7 74 41-114 104-186 (394)
281 1wy6_A Hypothetical protein ST 86.7 5.2 0.00018 30.4 8.8 36 63-98 118-153 (172)
282 3mkq_B Coatomer subunit alpha; 86.6 2.2 7.6E-05 33.7 7.2 50 45-99 14-63 (177)
283 2ijq_A Hypothetical protein; s 85.8 5.5 0.00019 30.9 8.9 30 5-34 35-64 (161)
284 4a5x_A MITD1, MIT domain-conta 85.6 4.1 0.00014 28.0 7.4 30 2-31 16-45 (86)
285 1wfd_A Hypothetical protein 15 82.7 6.2 0.00021 27.5 7.4 30 2-31 15-44 (93)
286 2cfu_A SDSA1; SDS-hydrolase, l 81.4 2.9 9.9E-05 40.1 6.9 53 35-87 448-500 (658)
287 4b4t_R RPN7, 26S proteasome re 80.4 3.5 0.00012 37.2 6.8 64 36-99 131-197 (429)
288 1qsa_A Protein (soluble lytic 79.9 13 0.00045 35.2 10.8 79 19-98 269-347 (618)
289 3lpz_A GET4 (YOR164C homolog); 79.9 27 0.00093 30.3 12.0 27 68-94 134-160 (336)
290 2cpt_A SKD1 protein, vacuolar 79.7 2.2 7.5E-05 31.3 4.3 13 18-30 15-27 (117)
291 2v6x_A Vacuolar protein sortin 79.7 9.4 0.00032 25.9 7.4 29 3-31 14-42 (85)
292 1qsa_A Protein (soluble lytic 79.7 6.6 0.00023 37.3 8.7 115 4-119 216-334 (618)
293 3ax2_A Mitochondrial import re 79.5 4 0.00014 27.1 5.1 33 6-38 21-53 (73)
294 3ax2_A Mitochondrial import re 77.8 6 0.0002 26.3 5.5 37 74-110 21-57 (73)
295 2wpv_A GET4, UPF0363 protein Y 76.4 33 0.0011 29.5 11.4 28 68-95 132-159 (312)
296 3mv2_A Coatomer subunit alpha; 76.1 16 0.00054 31.6 9.2 101 5-105 117-242 (325)
297 3t5v_B Nuclear mRNA export pro 74.6 6.4 0.00022 35.9 6.7 88 16-103 140-254 (455)
298 2p58_C Putative type III secre 74.6 20 0.0007 25.5 8.9 72 42-119 13-84 (116)
299 2vkj_A TM1634; membrane protei 73.2 6.4 0.00022 27.2 4.8 30 3-32 54-83 (106)
300 2cwy_A Hypothetical protein TT 72.5 8.7 0.0003 26.8 5.6 29 6-34 5-33 (94)
301 4b4t_S RPN3, 26S proteasome re 71.3 7.8 0.00027 35.9 6.5 60 7-68 236-302 (523)
302 2ynq_A ESSB; membrane protein, 70.2 31 0.0011 26.5 8.6 86 4-95 10-98 (161)
303 4gq2_M Nucleoporin NUP120; bet 69.4 15 0.0005 36.8 8.6 52 42-97 816-867 (950)
304 3mkr_B Coatomer subunit alpha; 69.1 56 0.0019 28.1 13.0 114 5-119 105-246 (320)
305 3t5x_A PCI domain-containing p 68.8 12 0.00041 29.9 6.5 49 5-53 17-70 (203)
306 2crb_A Nuclear receptor bindin 67.7 8.9 0.0003 26.7 4.6 28 36-63 15-42 (97)
307 4fhn_B Nucleoporin NUP120; pro 67.6 33 0.0011 34.9 10.9 90 9-102 819-931 (1139)
308 4gq2_M Nucleoporin NUP120; bet 66.9 26 0.00089 34.9 9.8 23 6-28 844-866 (950)
309 2uwj_G Type III export protein 66.6 22 0.00076 25.2 6.5 19 72-90 41-59 (115)
310 2crb_A Nuclear receptor bindin 66.1 8.4 0.00029 26.8 4.2 28 70-97 15-42 (97)
311 2rpa_A Katanin P60 ATPase-cont 65.0 6.2 0.00021 26.6 3.3 27 5-31 15-41 (78)
312 2cfu_A SDSA1; SDS-hydrolase, l 63.9 16 0.00056 34.8 7.4 52 69-120 448-499 (658)
313 1om2_A Protein (mitochondrial 63.2 7.3 0.00025 27.3 3.5 29 6-34 24-52 (95)
314 2rpa_A Katanin P60 ATPase-cont 62.2 26 0.0009 23.4 6.1 26 73-98 15-40 (78)
315 1om2_A Protein (mitochondrial 60.8 10 0.00035 26.5 4.0 31 75-105 25-55 (95)
316 2yhe_A SEC-alkyl sulfatase; hy 63.7 2 6.7E-05 41.3 0.0 54 36-89 461-514 (668)
317 3esl_A Checkpoint serine/threo 58.7 63 0.0021 25.8 8.8 51 51-101 94-146 (202)
318 2ijq_A Hypothetical protein; s 58.6 53 0.0018 25.2 8.1 60 39-98 35-103 (161)
319 2dl1_A Spartin; SPG20, MIT, st 55.6 28 0.00096 25.2 5.6 43 51-101 18-60 (116)
320 4aez_C MAD3, mitotic spindle c 53.8 88 0.003 25.4 10.7 49 53-101 131-181 (223)
321 2w2u_A Hypothetical P60 katani 53.2 49 0.0017 22.3 7.0 14 91-104 47-60 (83)
322 3t5x_A PCI domain-containing p 52.9 26 0.00089 27.9 5.8 36 36-71 14-49 (203)
323 4a5x_A MITD1, MIT domain-conta 48.7 60 0.002 22.0 6.5 22 42-63 22-43 (86)
324 3ph0_C ASCG; type III secretio 48.1 48 0.0016 20.7 6.2 49 41-90 11-60 (61)
325 2pmr_A Uncharacterized protein 47.8 17 0.00056 25.0 3.2 37 18-62 29-65 (87)
326 2oo2_A Hypothetical protein AF 47.0 17 0.0006 24.8 3.2 24 2-25 35-58 (86)
327 3t5v_B Nuclear mRNA export pro 45.7 29 0.001 31.5 5.5 60 9-68 183-253 (455)
328 2v6y_A AAA family ATPase, P60 45.0 67 0.0023 21.5 7.2 27 89-115 37-63 (83)
329 3re2_A Predicted protein; meni 43.6 26 0.00089 30.9 4.5 25 72-96 298-322 (472)
330 4b4t_O 26S proteasome regulato 42.9 1.7E+02 0.0059 25.6 11.2 87 12-98 86-197 (393)
331 3u84_A Menin; MLL, JUND, ledgf 41.3 46 0.0016 29.9 5.7 43 21-63 298-345 (550)
332 3spa_A Mtrpol, DNA-directed RN 40.8 1.1E+02 0.0036 31.2 8.9 67 37-104 128-201 (1134)
333 1wfd_A Hypothetical protein 15 40.5 86 0.0029 21.4 6.5 11 92-102 44-54 (93)
334 1wy6_A Hypothetical protein ST 40.2 1.2E+02 0.0041 23.0 10.0 64 4-67 92-156 (172)
335 3dza_A Uncharacterized putativ 40.1 71 0.0024 25.3 6.2 61 4-64 110-178 (191)
336 3myv_A SUSD superfamily protei 40.1 65 0.0022 28.9 7.0 47 52-98 164-218 (454)
337 3kez_A Putative sugar binding 38.8 70 0.0024 28.7 7.0 47 52-98 170-224 (461)
338 2cpt_A SKD1 protein, vacuolar 37.7 45 0.0015 24.1 4.5 9 54-62 17-25 (117)
339 2wpv_A GET4, UPF0363 protein Y 37.0 1.1E+02 0.0038 26.1 7.6 64 34-97 132-215 (312)
340 2ymb_A MITD1, MIT domain-conta 36.6 7.4 0.00025 32.6 0.0 27 5-31 26-52 (257)
341 3mcx_A SUSD superfamily protei 36.3 78 0.0027 28.5 6.9 48 52-99 176-231 (477)
342 3myv_A SUSD superfamily protei 36.2 90 0.0031 27.9 7.3 30 36-65 190-219 (454)
343 2xze_A STAM-binding protein; h 36.1 43 0.0015 25.2 4.3 30 2-31 40-69 (146)
344 2vkj_A TM1634; membrane protei 36.1 1E+02 0.0036 21.1 6.4 48 70-117 53-103 (106)
345 4gq4_A Menin; tumor suppressor 35.5 1.3E+02 0.0045 27.0 7.7 57 52-110 287-349 (489)
346 2v6x_A Vacuolar protein sortin 35.2 98 0.0034 20.6 6.5 11 84-94 27-37 (85)
347 2br9_A 14-3-3E, 14-3-3 protein 34.5 1.2E+02 0.0042 24.7 7.1 13 50-62 187-199 (234)
348 2kq1_A BH0266 protein; solutio 34.4 16 0.00054 26.4 1.5 23 231-253 78-100 (119)
349 3otn_A SUSD superfamily protei 34.3 1E+02 0.0034 27.9 7.3 47 52-98 160-225 (482)
350 3i4g_A SUSD-like carbohydrate 33.3 1.4E+02 0.0048 27.3 8.2 47 52-98 167-226 (528)
351 3lew_A SUSD-like carbohydrate 33.1 93 0.0032 28.2 6.9 48 52-99 174-232 (495)
352 3kez_A Putative sugar binding 32.7 1E+02 0.0036 27.6 7.1 30 36-65 196-225 (461)
353 3mcx_A SUSD superfamily protei 32.4 1.1E+02 0.0038 27.5 7.2 49 18-66 176-232 (477)
354 3lxu_X Tripeptidyl-peptidase 2 32.4 3.7E+02 0.013 28.0 11.5 46 3-48 1108-1153(1354)
355 3esl_A Checkpoint serine/threo 31.7 1.9E+02 0.0067 22.9 9.8 52 18-69 95-148 (202)
356 3u84_A Menin; MLL, JUND, ledgf 31.2 1.3E+02 0.0044 27.2 6.9 30 69-98 317-346 (550)
357 3lew_A SUSD-like carbohydrate 31.1 1.2E+02 0.004 27.6 7.2 31 36-66 203-233 (495)
358 2npm_A 14-3-3 domain containin 31.1 1.5E+02 0.005 24.7 7.1 15 49-63 211-225 (260)
359 2cwy_A Hypothetical protein TT 30.9 1.3E+02 0.0044 20.6 5.8 56 41-98 6-67 (94)
360 3re2_A Predicted protein; meni 30.4 89 0.003 27.6 5.7 44 21-64 276-324 (472)
361 4gq4_A Menin; tumor suppressor 30.3 87 0.003 28.1 5.7 44 21-64 283-331 (489)
362 2e2a_A Protein (enzyme IIA); h 30.2 65 0.0022 22.8 4.1 28 3-30 21-48 (105)
363 3lxu_X Tripeptidyl-peptidase 2 30.1 4.2E+02 0.014 27.6 11.4 37 48-85 1296-1332(1354)
364 1wcr_A PTS system, N, N'-diace 29.5 68 0.0023 22.6 4.1 29 2-30 18-46 (103)
365 4b4t_P 26S proteasome regulato 29.2 3E+02 0.01 24.4 16.6 61 37-97 138-204 (445)
366 1o9d_A 14-3-3-like protein C; 29.2 1.6E+02 0.0056 24.4 7.1 9 83-91 191-199 (260)
367 4a1g_A Mitotic checkpoint seri 29.1 1.9E+02 0.0064 21.9 7.5 48 54-101 83-132 (152)
368 2yhe_A SEC-alkyl sulfatase; hy 34.9 12 0.00041 35.9 0.0 51 70-120 461-511 (668)
369 3uzd_A 14-3-3 protein gamma; s 28.7 1.7E+02 0.0059 24.0 7.1 10 83-92 187-196 (248)
370 3ubw_A 14-3-3E, 14-3-3 protein 28.4 1.8E+02 0.006 24.2 7.1 13 50-62 213-225 (261)
371 3k1s_A PTS system, cellobiose- 28.0 74 0.0025 22.7 4.1 29 2-30 22-50 (109)
372 2dl1_A Spartin; SPG20, MIT, st 27.9 82 0.0028 22.7 4.3 46 15-68 16-61 (116)
373 3isy_A Bsupi, intracellular pr 26.5 1E+02 0.0036 22.3 4.8 50 180-229 15-67 (120)
374 3l8r_A PTCA, putative PTS syst 26.5 80 0.0028 22.9 4.1 27 3-29 38-64 (120)
375 2zan_A Vacuolar protein sortin 26.4 14 0.00047 33.3 0.0 30 2-31 11-40 (444)
376 3iqu_A 14-3-3 protein sigma; s 26.0 1.9E+02 0.0063 23.7 6.7 15 49-63 189-203 (236)
377 4fm3_A Uncharacterized hypothe 25.1 1.8E+02 0.006 20.3 7.6 24 4-27 36-59 (98)
378 2qx5_A Nucleoporin NIC96; mRNA 24.6 1.7E+02 0.0057 27.9 7.1 25 78-103 546-570 (661)
379 3qnk_A Putative lipoprotein; a 24.6 1.6E+02 0.0056 26.7 7.0 48 52-99 153-211 (517)
380 3snx_A SUSD homolog, putative 24.5 1.5E+02 0.005 26.6 6.6 48 52-99 160-220 (460)
381 3vtt_A Envelope protein E; imm 23.6 17 0.00058 25.9 0.0 14 172-185 92-105 (107)
382 2o8p_A 14-3-3 domain containin 22.9 3E+02 0.01 22.2 9.4 50 15-64 138-196 (227)
383 4fei_A Heat shock protein-rela 22.7 1.6E+02 0.0056 20.0 5.2 42 218-260 16-57 (102)
384 3jq1_A SUSD superfamily protei 22.7 1.4E+02 0.0048 26.9 6.0 47 52-98 154-208 (481)
385 2pmr_A Uncharacterized protein 22.6 1.7E+02 0.0058 19.8 5.0 28 69-96 38-65 (87)
386 2npu_A FKBP12-rapamycin comple 22.4 2.3E+02 0.0078 20.7 6.1 18 11-28 49-66 (126)
387 2jpu_A ORF C02003 protein; sol 22.3 1.1E+02 0.0039 22.4 4.3 30 2-31 7-36 (129)
388 4a1g_A Mitotic checkpoint seri 22.3 2.5E+02 0.0087 21.1 9.1 49 21-69 84-134 (152)
389 3qnk_A Putative lipoprotein; a 22.1 2.1E+02 0.0071 26.0 7.1 30 36-65 182-211 (517)
390 3snx_A SUSD homolog, putative 21.9 50 0.0017 29.8 2.8 31 36-66 191-221 (460)
391 3uzq_B Envelope protein; dengu 21.2 19 0.00065 25.9 -0.1 14 172-185 91-104 (114)
392 2uwj_G Type III export protein 20.8 2.3E+02 0.0079 20.1 7.2 74 14-93 18-91 (115)
393 2p58_C Putative type III secre 20.8 2.3E+02 0.0079 20.1 8.5 75 13-93 18-92 (116)
394 3hdx_A SUSD homolog, SUSD supe 20.5 1.9E+02 0.0065 25.9 6.5 48 52-99 156-226 (478)
395 3efz_A 14-3-3 protein; 14-3-3, 20.1 1.7E+02 0.006 24.3 5.5 47 51-97 174-224 (268)
No 1
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.92 E-value=6e-25 Score=160.19 Aligned_cols=92 Identities=77% Similarity=1.245 Sum_probs=86.4
Q ss_pred CCCCcccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCcceEEEeCcEEEEEEeec
Q 023550 172 PKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKA 251 (281)
Q Consensus 172 ~k~r~~w~Qt~~~v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~ 251 (281)
+++||+|+||.+.|+|+|+++|+.++++.|+|++++|+|.+...++..|.++++||++|+|++|+|++.+++|+|+|+|+
T Consensus 1 ~~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~ 80 (92)
T 2xcm_C 1 AKYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKA 80 (92)
T ss_dssp CCSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTTSCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBS
T ss_pred CCccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCCCcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcC
Confidence 46799999999999999999999999999999999999999877777899999999999999999999999999999999
Q ss_pred CCCCCCccccCc
Q 023550 252 EPIQWSSLEFSK 263 (281)
Q Consensus 252 ~~~~W~~L~~~~ 263 (281)
+++.|++|++++
T Consensus 81 ~~~~W~~L~~~k 92 (92)
T 2xcm_C 81 DIITWASLEHGK 92 (92)
T ss_dssp SSCCCSCSBTTC
T ss_pred CCCcchhcccCC
Confidence 989999998753
No 2
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.91 E-value=1.4e-24 Score=167.75 Aligned_cols=93 Identities=26% Similarity=0.478 Sum_probs=86.3
Q ss_pred CCCCcccccC-CCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCCCC------------eeeeccccccccccCcceEE
Q 023550 172 PKYRHEFYQK-PEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEE------------AYHFQPRLFGKIIPAKCRYE 238 (281)
Q Consensus 172 ~k~r~~w~Qt-~~~v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~~~------------~~~~~~~L~~~I~p~~s~~~ 238 (281)
..+||+|||+ .+.|+|+|++|++.+++++|+|++++|+|.+...++. .|.|+++||++|+|++|+|+
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~ 97 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFC 97 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEE
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEE
Confidence 4689999999 9999999999999999999999999999999876554 79999999999999999999
Q ss_pred EeCcEEEEEEeecCCCCCCccccCcC
Q 023550 239 VLSTKVEIRLAKAEPIQWSSLEFSKG 264 (281)
Q Consensus 239 v~~~kiei~L~K~~~~~W~~L~~~~~ 264 (281)
|.+++|||+|+|++...|++|++...
T Consensus 98 v~~~kIeI~L~K~e~~~W~~L~~~~~ 123 (134)
T 1wh0_A 98 FTASRIDICLRKRQSQRWGGLEAPAA 123 (134)
T ss_dssp ECSSEEEEEEEESSSCCCSCSBCCCS
T ss_pred EeCCEEEEEEEECCCCccccccccCc
Confidence 99999999999999999999997653
No 3
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.90 E-value=4.1e-24 Score=161.95 Aligned_cols=104 Identities=33% Similarity=0.615 Sum_probs=87.9
Q ss_pred CCCCCcccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCcceEEEeCcEEEEEEee
Q 023550 171 RPKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAK 250 (281)
Q Consensus 171 ~~k~r~~w~Qt~~~v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~kiei~L~K 250 (281)
.+++||+|+|+.+.|+|+|+++|+.++++.|+|++++|+|.+...+|..|.++++||++|+|++|+|++.+++|+|+|+|
T Consensus 7 ~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K 86 (114)
T 1rl1_A 7 QSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKK 86 (114)
T ss_dssp -CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSSSEEEEEEC
T ss_pred CCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEeeCCCcCCccccEEEEECCEEEEEEEc
Confidence 35679999999999999999999999999999999999999987777889999999999999999999999999999999
Q ss_pred cCCCCCCccccCcCcCCCCcCCCC
Q 023550 251 AEPIQWSSLEFSKGAVVPQRVNPP 274 (281)
Q Consensus 251 ~~~~~W~~L~~~~~~~~~~~~~~~ 274 (281)
++...|++|++...+...+...+.
T Consensus 87 ~~~~~W~~L~~~~~~~~~~~i~~~ 110 (114)
T 1rl1_A 87 PEAVRWEKLEGQGDVPTPKQFVAD 110 (114)
T ss_dssp SSCCCCSSSBTTC-----------
T ss_pred CCCCcCccccccCCccCCcccCCC
Confidence 998999999998887777765543
No 4
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.90 E-value=1.1e-23 Score=162.31 Aligned_cols=90 Identities=20% Similarity=0.245 Sum_probs=83.8
Q ss_pred CCcccccCCCeEEEEEEecCC---CCcceEEEEeeeEEEEEEEcCCCCeeeecc-ccccccccCcceEEEeCcEEEEEEe
Q 023550 174 YRHEFYQKPEEVVVTVFAKGI---PAKNVTVDFGEQILSVSIDVPGEEAYHFQP-RLFGKIIPAKCRYEVLSTKVEIRLA 249 (281)
Q Consensus 174 ~r~~w~Qt~~~v~i~v~~k~~---~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~-~L~~~I~p~~s~~~v~~~kiei~L~ 249 (281)
.||+|+||.+.|+|+|+++|+ .++++.|+|++++|+|.+...+|..|.|++ +||++|+|++|+|+|.+++|||+|+
T Consensus 21 ~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~kVei~L~ 100 (127)
T 1x5m_A 21 SNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCR 100 (127)
T ss_dssp CSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETTEEEEEEE
T ss_pred cEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCCEEEEEEE
Confidence 499999999999999999998 789999999999999999877788999999 4999999999999999999999999
Q ss_pred ecCCC-CCCccccCc
Q 023550 250 KAEPI-QWSSLEFSK 263 (281)
Q Consensus 250 K~~~~-~W~~L~~~~ 263 (281)
|++.. .|++|++..
T Consensus 101 K~~~~~~W~~L~~~~ 115 (127)
T 1x5m_A 101 KKVENTRWDYLTQVE 115 (127)
T ss_dssp CSSSSCCCSSSBHHH
T ss_pred ECCCCCCCCcccccc
Confidence 99974 999998653
No 5
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.87 E-value=6.6e-21 Score=146.43 Aligned_cols=112 Identities=27% Similarity=0.476 Sum_probs=109.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
|+.++.+|+.+++.|+|++|+..|+++++.+|+++.+|.++|.+|..+|++++|+.+++++++++|.+..+|+.+|.+|.
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~ 92 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLV 92 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023550 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (281)
.+|++++|+.+|+++++++|++..++..++.|
T Consensus 93 ~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 93 AMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 99999999999999999999999998888776
No 6
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.85 E-value=2.5e-21 Score=148.65 Aligned_cols=89 Identities=19% Similarity=0.250 Sum_probs=82.4
Q ss_pred CcccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEc-CCCCeeeeccccccccccCcceEEEeCcEEEEEEeecCC
Q 023550 175 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDV-PGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEP 253 (281)
Q Consensus 175 r~~w~Qt~~~v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~-~~~~~~~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~~ 253 (281)
+|+||||.+.|+|+|+++++ ++++|+|++++|+|.+.. .+|..|.++++||++|+|++|+|+|.+++|+|+|+|+++
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEESST
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCCCceEEEEEEccceeccccCEEEECCCEEEEEEEECCC
Confidence 79999999999999999985 799999999999999875 467789999999999999999999999999999999986
Q ss_pred -CCCCccccCcCc
Q 023550 254 -IQWSSLEFSKGA 265 (281)
Q Consensus 254 -~~W~~L~~~~~~ 265 (281)
..|++|++...+
T Consensus 83 ~~~W~rL~~~~~K 95 (125)
T 1ejf_A 83 GQSWPRLTKERAK 95 (125)
T ss_dssp TCCCSSSBSSCCC
T ss_pred CCCCCceecCCCc
Confidence 699999988765
No 7
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.84 E-value=2e-21 Score=153.16 Aligned_cols=89 Identities=24% Similarity=0.309 Sum_probs=82.6
Q ss_pred CCcccccCCCeEEEEEEecCCCCcceEEEEe-eeEEEEEEEcCCCCeeeeccccccccccCcceEEEeCcEEEEEEeecC
Q 023550 174 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFG-EQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAE 252 (281)
Q Consensus 174 ~r~~w~Qt~~~v~i~v~~k~~~~~~~~v~~~-~~~l~~~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~ 252 (281)
++|.|||+.+.|+|+|+++++ ++++|+|+ +++|+|++...+|..|.++++||++|+|+ |+|+|++++|||+|+|++
T Consensus 5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~~~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~L~K~e 81 (150)
T 2kmw_A 5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIMTE-YRKNVGLRNIIFSIQKEE 81 (150)
T ss_dssp CCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETTTTEEEEEEEEBSSCEEEE-EEEEEESSSEEEEEEECC
T ss_pred CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcCCCceEEEEeEhhhccccc-ceEEecCCEEEEEEEECC
Confidence 389999999999999999987 68999999 79999998766778899999999999999 999999999999999999
Q ss_pred CCCCCccccCcCc
Q 023550 253 PIQWSSLEFSKGA 265 (281)
Q Consensus 253 ~~~W~~L~~~~~~ 265 (281)
+..|++|++...+
T Consensus 82 ~~~W~rL~k~~~K 94 (150)
T 2kmw_A 82 RSWWTRLLKSEEK 94 (150)
T ss_dssp SSCCSCSBSCCSS
T ss_pred CCcCcccccCCcc
Confidence 9999999988765
No 8
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.83 E-value=1.8e-20 Score=143.72 Aligned_cols=99 Identities=16% Similarity=0.162 Sum_probs=87.5
Q ss_pred CCcccccCCCeEEEEEEec-CC-CCcceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCcceEEEeCcE-EEEEEee
Q 023550 174 YRHEFYQKPEEVVVTVFAK-GI-PAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTK-VEIRLAK 250 (281)
Q Consensus 174 ~r~~w~Qt~~~v~i~v~~k-~~-~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~k-iei~L~K 250 (281)
.+|.|+||.+.|+|+|.++ |+ +++++.|+|++++|+|.+...+|..+.++++||++|+|++|+|++.+++ |+|+|+|
T Consensus 20 ~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i~L~K 99 (124)
T 1wgv_A 20 ENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVNLSK 99 (124)
T ss_dssp SSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECTTSEEEEEECB
T ss_pred CcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEcccccCcCCCcCCEEEEeCCCEEEEEEEE
Confidence 4899999999999999975 77 8899999999999999997666667889999999999999999999987 9999999
Q ss_pred cCCCCCCccccCcCcCCCCcCC
Q 023550 251 AEPIQWSSLEFSKGAVVPQRVN 272 (281)
Q Consensus 251 ~~~~~W~~L~~~~~~~~~~~~~ 272 (281)
++...|++|.+...+..++..+
T Consensus 100 ~~~~~W~~L~~~~~~id~~ki~ 121 (124)
T 1wgv_A 100 VGEYWWNAILEGEEPIDIDSGP 121 (124)
T ss_dssp SSSCCCSCSBTTSCCCSCCCSC
T ss_pred CCCCCCcCcccCCCccChhhcC
Confidence 9889999999776655555543
No 9
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.82 E-value=4.6e-20 Score=146.71 Aligned_cols=120 Identities=20% Similarity=0.147 Sum_probs=111.8
Q ss_pred ChhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-------CHH-----HHHHHHHHHHHccCHHHHHHHHHHHHHc---
Q 023550 1 MATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN-------SAE-----LFADRAQASIKLQNFTEAVADANRAIEL--- 65 (281)
Q Consensus 1 ma~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~-------~~~-----~~~~~a~~~~~l~~~~~A~~~~~~al~l--- 65 (281)
||..++..|+.++..|+|++|+..|+++|.++|+ +.. +|.++|.++.++|+|++|+.+|+++|++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4678999999999999999999999999999999 544 9999999999999999999999999999
Q ss_pred ----CCCcHHHH----HHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 66 ----EPSMSKAY----WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 66 ----~p~~~~a~----~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|++..+| +++|.++..+|++++|+.+|+++++++|++......+..+...+...
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~ 152 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDR 152 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999999999999999999998877777777766654
No 10
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1e-18 Score=132.81 Aligned_cols=116 Identities=31% Similarity=0.460 Sum_probs=111.6
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++.+|..++..|+|++|+..|++++..+|+++.++.++|.++..+|+|++|+.++++++.++|.+..+++.+|.++.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcC------CCChhHHHHHHHHHHHH
Q 023550 82 KLEEYETAKVALEKGASLA------PGDSRFTNLIKECEERI 117 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~------p~~~~~~~~l~~~~~~l 117 (281)
.+|++++|+.+|+++++++ |++..+...+..+...+
T Consensus 84 ~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 84 AVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 9999999999999999999 99999999999887654
No 11
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.80 E-value=1.3e-19 Score=140.28 Aligned_cols=94 Identities=13% Similarity=0.173 Sum_probs=75.5
Q ss_pred CCcccccCCCeEEEEEEe-cCCCCcceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCcceEEEeCcEEEEEEeecC
Q 023550 174 YRHEFYQKPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAE 252 (281)
Q Consensus 174 ~r~~w~Qt~~~v~i~v~~-k~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~ 252 (281)
.+|.|+||.+.|+|+|++ +|++++++.|+|++++|+|.+. |.+ .++++||++|+|++|+|++.+++|+|+|+|+.
T Consensus 5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~---g~~-~~~~~L~~~I~~e~S~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ---GEI-VIDGELLHEVDVSSLWWVINGDVVDVNVTKKR 80 (131)
T ss_dssp CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET---TEE-EEEEEBSSCEEEEEEEEEEETTEEEEEEEESS
T ss_pred CcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC---CEe-eEccccccccccccCEEEEeCCEEEEEEEECC
Confidence 489999999999999997 7899999999999999999985 556 78999999999999999999999999999996
Q ss_pred CCCCCccccCcCcCCCCcC
Q 023550 253 PIQWSSLEFSKGAVVPQRV 271 (281)
Q Consensus 253 ~~~W~~L~~~~~~~~~~~~ 271 (281)
...|++|.+...+......
T Consensus 81 ~~~W~~L~~~~~~id~~k~ 99 (131)
T 2o30_A 81 NEWWDSLLVGSESVDVQKL 99 (131)
T ss_dssp CCCCSCSBC----------
T ss_pred CCCCccccCCCCCCCHhHc
Confidence 6889999976655544443
No 12
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.80 E-value=9.7e-19 Score=139.05 Aligned_cols=120 Identities=23% Similarity=0.312 Sum_probs=113.8
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc------------------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI------------------SPNSAELFADRAQASIKLQNFTEAVADANRAI 63 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~------------------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al 63 (281)
+..++.+|+.++..|+|++|+..|++++.. +|.+..++.++|.||+++|+|++|+.++++++
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 467899999999999999999999999999 77778999999999999999999999999999
Q ss_pred HcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh-hHHHHHHHHHHHHHhhh
Q 023550 64 ELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS-RFTNLIKECEERIAEET 121 (281)
Q Consensus 64 ~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~-~~~~~l~~~~~~l~~~~ 121 (281)
.++|.+..+|+++|.+|+.+|+|++|+.+|++++.++|++. .+...+..+...++...
T Consensus 91 ~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~ 149 (162)
T 3rkv_A 91 KREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKK 149 (162)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHT
T ss_pred hcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 77899999998888763
No 13
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.79 E-value=5.7e-18 Score=134.84 Aligned_cols=120 Identities=27% Similarity=0.383 Sum_probs=113.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|++++..+|+++.++.++|.+|..+|+|++|+.+|++++.++|.+..+|+.+|.+|+
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 90 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARF 90 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChh--HHHHHHHHHHHHHhhh
Q 023550 82 KLEEYETAKVALEKGASLAPGDSR--FTNLIKECEERIAEET 121 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~~--~~~~l~~~~~~l~~~~ 121 (281)
.+|++++|+.+|+++++++|++.. +...+..+..++++..
T Consensus 91 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~ 132 (164)
T 3sz7_A 91 DMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEAN 132 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988 6677777777777763
No 14
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.79 E-value=5.7e-19 Score=136.67 Aligned_cols=96 Identities=19% Similarity=0.301 Sum_probs=84.1
Q ss_pred CcccccCCCeEEEEEEec-C--CCCcceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCcceEEEeCc-EEEEEEee
Q 023550 175 RHEFYQKPEEVVVTVFAK-G--IPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLST-KVEIRLAK 250 (281)
Q Consensus 175 r~~w~Qt~~~v~i~v~~k-~--~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~-kiei~L~K 250 (281)
+|.|+||.+.|+|+|.++ | ++++++.|+|++++|+|.++ |..+.++++||++|+|++|+|++.++ .|+|+|+|
T Consensus 9 ~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~~~L~~~I~~e~s~w~i~~~k~v~i~L~K 85 (131)
T 1wfi_A 9 NYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK---GQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEK 85 (131)
T ss_dssp SSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET---TSCCSBCSCBSSCBCSTTCEEEEETTTEEEEEEEB
T ss_pred cEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC---CceEEEecccccccccccCEEEEcCCCEEEEEEEE
Confidence 899999999999999976 6 88999999999999999985 55677999999999999999999998 59999999
Q ss_pred cCC-CCCCccccCcCcCCCCcCCC
Q 023550 251 AEP-IQWSSLEFSKGAVVPQRVNP 273 (281)
Q Consensus 251 ~~~-~~W~~L~~~~~~~~~~~~~~ 273 (281)
++. ..|++|.+...+...+...+
T Consensus 86 ~~~~~~W~~L~~~~~~id~~ki~p 109 (131)
T 1wfi_A 86 INKMEWWNRLVTSDPEINTKKINP 109 (131)
T ss_dssp SSSCCCCSCSBSSCCSCCCSSSSC
T ss_pred CCCCCCChhhhcCCCCCCccEecC
Confidence 987 69999997765555555433
No 15
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.79 E-value=5.7e-20 Score=142.51 Aligned_cols=91 Identities=18% Similarity=0.245 Sum_probs=76.7
Q ss_pred CCcccccCCCe-------EEEEEEecCCCCcceEEEEeeeEEEEEEEcCC------CCeeeeccccccccccCcceEEEe
Q 023550 174 YRHEFYQKPEE-------VVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG------EEAYHFQPRLFGKIIPAKCRYEVL 240 (281)
Q Consensus 174 ~r~~w~Qt~~~-------v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~------~~~~~~~~~L~~~I~p~~s~~~v~ 240 (281)
++|.|||+.+. |+|+|+++++ .+++|+|++++|+|.+...+ +..|.++++||++|+|++|+|++.
T Consensus 7 p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~~v~ 84 (134)
T 2cg9_X 7 PQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMHKVA 84 (134)
T ss_dssp ----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEEEEC
T ss_pred CCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECCEEEEEEecccccCCccCceEEEEEEChhhccccccEEEEC
Confidence 37999999988 9999999986 48999999999999876543 468999999999999999999999
Q ss_pred CcE-EEEEEeecC--CCCCCccccCcCcC
Q 023550 241 STK-VEIRLAKAE--PIQWSSLEFSKGAV 266 (281)
Q Consensus 241 ~~k-iei~L~K~~--~~~W~~L~~~~~~~ 266 (281)
+++ |+|+|+|++ ...|++|++...+.
T Consensus 85 ~~~~vei~L~K~~~~~~~W~rL~k~~~K~ 113 (134)
T 2cg9_X 85 NGQHYFLKLYKKDLESEYWPRLTKEKVKY 113 (134)
T ss_dssp CC--CEEEEEECSSSSCCCSCSSSSCCCC
T ss_pred CCEEEEEEEEECCCCCCCCCceecCCCcc
Confidence 999 999999998 47999999887653
No 16
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.77 E-value=8.2e-18 Score=133.42 Aligned_cols=103 Identities=13% Similarity=0.037 Sum_probs=99.7
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|++++..+|+++.+|.++|.+|..+|+|++|+..|++++.++|+++.+|+.+|.+|.
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~ 115 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQL 115 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCCh
Q 023550 82 KLEEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~ 104 (281)
.+|++++|+.+|++++++.|+.+
T Consensus 116 ~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 116 RLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999765
No 17
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.77 E-value=9.3e-18 Score=128.74 Aligned_cols=111 Identities=23% Similarity=0.288 Sum_probs=100.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc-------HHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM-------SKAYW 74 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~-------~~a~~ 74 (281)
|..+...|+.+++.|+|++|+..|+++++++|+++.+|.++|.+|..+|+|++|+.+++++++++|.+ +.+++
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~ 87 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMS 87 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999998765 56899
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023550 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (281)
++|.++..+|+|++|+.+|++++..+|+ +.....+..+
T Consensus 88 ~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l 125 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL 125 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence 9999999999999999999999999885 4454444443
No 18
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.76 E-value=2.2e-18 Score=131.36 Aligned_cols=91 Identities=18% Similarity=0.226 Sum_probs=80.4
Q ss_pred CCcccccCCCeEEEEEEec-C--CCCcceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCcceEEEeCc-EEEEEEe
Q 023550 174 YRHEFYQKPEEVVVTVFAK-G--IPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLST-KVEIRLA 249 (281)
Q Consensus 174 ~r~~w~Qt~~~v~i~v~~k-~--~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~-kiei~L~ 249 (281)
.+|.|+||.+.|+|+|.++ | ++++++.|+|++++|+|.++ |..+.++++||++|+|++|+|++.++ +|+|+|+
T Consensus 17 ~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~g~L~~~I~~deS~w~i~~~~~i~i~L~ 93 (121)
T 3qor_A 17 PNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK---GQPAIIDGELYNEVKVEESSWLIADGAVVTVHLE 93 (121)
T ss_dssp SSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET---TSCCSEEEEBSSCBCGGGCEEEEETTTEEEEEEE
T ss_pred CCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc---CcceEEeccccccccccccEEEEcCCCEEEEEEE
Confidence 4799999999999999875 5 78899999999999999986 55688999999999999999999996 8999999
Q ss_pred ecCC-CCCCccccCcCcCC
Q 023550 250 KAEP-IQWSSLEFSKGAVV 267 (281)
Q Consensus 250 K~~~-~~W~~L~~~~~~~~ 267 (281)
|++. ..|++|.......-
T Consensus 94 K~~~~~~W~~L~~~~~~id 112 (121)
T 3qor_A 94 KINKMEWWSRLVSSDPEIN 112 (121)
T ss_dssp BSSSSCCCSCSBTTSCCBC
T ss_pred ECCCCCCChhhhcCCCCCc
Confidence 9987 79999986554333
No 19
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.76 E-value=2e-17 Score=130.27 Aligned_cols=118 Identities=11% Similarity=0.135 Sum_probs=112.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|+++.++.++|.++..+|+|++|+..|++++.++|+++.+++.+|.+|..
T Consensus 22 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~ 101 (148)
T 2vgx_A 22 EQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ 101 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|++++|+.+|+++++++|+++....+..++...+...
T Consensus 102 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l 139 (148)
T 2vgx_A 102 XGELAEAESGLFLAQELIANXPEFXELSTRVSSMLEAI 139 (148)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHHHH
Confidence 99999999999999999999999888888888877765
No 20
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.76 E-value=2.3e-17 Score=128.45 Aligned_cols=118 Identities=10% Similarity=0.134 Sum_probs=112.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|+++.+|..+|.++..+|+|++|+..|++++.++|+++.+++.+|.+|..
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 98 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ 98 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|++++|+.+|++++.++|+++....+..++...++..
T Consensus 99 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l 136 (142)
T 2xcb_A 99 LGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAV 136 (142)
T ss_dssp TTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 99999999999999999999999888888888777665
No 21
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.73 E-value=1.9e-17 Score=130.63 Aligned_cols=112 Identities=18% Similarity=0.120 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.++..|..++..|+|++|+..|+++++.+|+++.+|.++|.+|..+|++++|+..|+++++++|++..+++.+|.+|..+
T Consensus 33 ~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 112 (150)
T 4ga2_A 33 KGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKN 112 (150)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHH-HHHhhhcCCCChhHHHHHHHHHH
Q 023550 84 EEYETAKVA-LEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 84 g~~~~A~~~-~~~a~~l~p~~~~~~~~l~~~~~ 115 (281)
|++++|... ++++++++|+++.+...+.++..
T Consensus 113 ~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~ 145 (150)
T 4ga2_A 113 DVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLD 145 (150)
T ss_dssp CSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 999887765 58999999999988877776643
No 22
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.72 E-value=7.7e-18 Score=133.85 Aligned_cols=87 Identities=23% Similarity=0.367 Sum_probs=78.4
Q ss_pred CCCcccccCCCeEEEEEEe-cCCCCcceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCcceEEEeCcE-EEEEEee
Q 023550 173 KYRHEFYQKPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTK-VEIRLAK 250 (281)
Q Consensus 173 k~r~~w~Qt~~~v~i~v~~-k~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~k-iei~L~K 250 (281)
..+|.|+||.+.|+|+|.+ +|++++++.|+|++++|+|.++ |.. .++++||++|+|++|+|+|.+++ |+|+|+|
T Consensus 13 ~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k---g~~-~l~g~L~~~I~~eeS~w~i~~~k~v~I~L~K 88 (157)
T 2rh0_A 13 TPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG---GRE-ILKGKLFDSTIADEGTWTLEDRKMVRIVLTK 88 (157)
T ss_dssp CSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET---TEE-EEEEEBSSCBCGGGCEEEEECCCEEEEEEEB
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC---CEE-EEeeccccccCccccEEEEcCCcEEEEEEEE
Confidence 3589999999999999997 5888999999999999999985 555 48999999999999999999987 9999999
Q ss_pred cCC---CCCCccccCc
Q 023550 251 AEP---IQWSSLEFSK 263 (281)
Q Consensus 251 ~~~---~~W~~L~~~~ 263 (281)
++. ..|++|.+..
T Consensus 89 ~~~~~~~~W~~L~k~~ 104 (157)
T 2rh0_A 89 TKRDAANCWTSLLESE 104 (157)
T ss_dssp SSCSTTCCCSEEETTE
T ss_pred cCCCcCCcChhhhcCC
Confidence 985 7999998754
No 23
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.71 E-value=2.2e-16 Score=120.82 Aligned_cols=119 Identities=24% Similarity=0.367 Sum_probs=112.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|.+++..+|++..++.++|.++..+|++++|+..+++++.++|.+..+++.+|.++.
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 88 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 88 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCC-----ChhHHHHHHHHHHHHHhh
Q 023550 82 KLEEYETAKVALEKGASLAPG-----DSRFTNLIKECEERIAEE 120 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~-----~~~~~~~l~~~~~~l~~~ 120 (281)
.+|++++|+.+|++++.++|+ +..+...+..+.......
T Consensus 89 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~ 132 (137)
T 3q49_B 89 EMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNS 132 (137)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 777888888887776554
No 24
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.70 E-value=5.8e-16 Score=126.92 Aligned_cols=121 Identities=22% Similarity=0.301 Sum_probs=115.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH----------------HHHHHHHHHHHHccCHHHHHHHHHHHHHc
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----------------ELFADRAQASIKLQNFTEAVADANRAIEL 65 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~----------------~~~~~~a~~~~~l~~~~~A~~~~~~al~l 65 (281)
+..++..|..++..|+|++|+..|.+++...|+++ .++.++|.+|..+|+|++|+.++++++.+
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 35688999999999999999999999999999887 89999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhhhC
Q 023550 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEETG 122 (281)
Q Consensus 66 ~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~~~ 122 (281)
+|.+..+++.+|.+|+.+|++++|+.+|+++++++|++..++..+..+...+++..+
T Consensus 118 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 174 (198)
T 2fbn_A 118 DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARK 174 (198)
T ss_dssp STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC
T ss_pred CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998887743
No 25
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.70 E-value=3.1e-16 Score=119.18 Aligned_cols=102 Identities=12% Similarity=0.008 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.++..|..++..|++++|+..|.+++..+|+++.+++.+|.++..+|++++|+..++++++++|++..+++.+|.+|..+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHhhhcCCCChh
Q 023550 84 EEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 84 g~~~~A~~~~~~a~~l~p~~~~ 105 (281)
|++++|+.+|+++++++|++..
T Consensus 99 g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 99 HNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHC-------
T ss_pred CCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999997653
No 26
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.69 E-value=4.2e-16 Score=129.29 Aligned_cols=117 Identities=15% Similarity=0.053 Sum_probs=111.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH----------------HHHHHHHccCHHHHHHHHHHHHHc
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFAD----------------RAQASIKLQNFTEAVADANRAIEL 65 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~----------------~a~~~~~l~~~~~A~~~~~~al~l 65 (281)
++.++.+|..++..|+|++|+..|++++..+|+++.+++. +|.+|..+|++++|+..|++++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023550 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 66 ~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (281)
+|++..+++.+|.+++.+|++++|+.+|+++++++|++..++..++.+....+
T Consensus 84 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 84 APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTA 136 (208)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999988888765443
No 27
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.69 E-value=1.3e-15 Score=112.43 Aligned_cols=114 Identities=26% Similarity=0.440 Sum_probs=108.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|.+++..+|+++.++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHH
Q 023550 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (281)
.+|++++|..+|+++++++|++..++..+..+..
T Consensus 84 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 84 FLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 9999999999999999999999988888777653
No 28
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.69 E-value=5.8e-16 Score=117.10 Aligned_cols=116 Identities=28% Similarity=0.409 Sum_probs=110.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 96 (133)
T 2lni_A 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEA 96 (133)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (281)
+|++++|+.+|++++.++|.+..++..+..+...++
T Consensus 97 ~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 97 MKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQY 132 (133)
T ss_dssp TTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhc
Confidence 999999999999999999999988888888876543
No 29
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.68 E-value=1.1e-15 Score=136.37 Aligned_cols=119 Identities=21% Similarity=0.360 Sum_probs=113.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------------AELFADRAQASIKLQNFTEAVADANRAIELE 66 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---------------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~ 66 (281)
+..++..|..++..|+|++|+..|.+++..+|++ ..++.++|.||+++|+|++|+.+|++++.++
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 226 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD 226 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3567889999999999999999999999999999 6999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 67 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
|.+..+++++|.+|+.+|+|++|+.+|+++++++|++..++..++.+...+++.
T Consensus 227 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 280 (336)
T 1p5q_A 227 SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQ 280 (336)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988888877665
No 30
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.67 E-value=8.1e-16 Score=142.85 Aligned_cols=119 Identities=23% Similarity=0.331 Sum_probs=109.6
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------------AELFADRAQASIKLQNFTEAVADANRAIELE 66 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---------------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~ 66 (281)
+..++.+|+.+++.|+|++|+..|++++.++|++ ..+|.++|.||+++|+|++|+.+|++++.++
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 347 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLD 347 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 3568899999999999999999999999999998 7999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 67 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
|++..+++++|.+|+.+|+|++|+.+|+++++++|++..++..+..+...+++.
T Consensus 348 p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 401 (457)
T 1kt0_A 348 SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEH 401 (457)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988887765
No 31
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.67 E-value=3e-15 Score=112.29 Aligned_cols=117 Identities=33% Similarity=0.473 Sum_probs=111.5
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+.+++.++|.+..+++.+|.++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (131)
T 2vyi_A 13 ERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSS 92 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
+|++++|+.+|+++++++|++...+..++.+...+++
T Consensus 93 ~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 93 LNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred hCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999888888876654
No 32
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.67 E-value=1.2e-15 Score=115.42 Aligned_cols=115 Identities=17% Similarity=0.150 Sum_probs=105.6
Q ss_pred ChhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc---HHHHH
Q 023550 1 MATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA---ELFADRAQASIKLQNFTEAVADANRAIELEPSM---SKAYW 74 (281)
Q Consensus 1 ma~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~---~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~---~~a~~ 74 (281)
|++.++..|..++..|+|++|+..|.+++..+|++. .+++.+|.++..+|+|++|+..+++++.++|++ ..+++
T Consensus 1 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (129)
T 2xev_A 1 MARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLL 80 (129)
T ss_dssp --CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred CcHHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHH
Confidence 466789999999999999999999999999999988 899999999999999999999999999999999 89999
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHH
Q 023550 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (281)
.+|.+++.+|++++|+..|++++..+|++........++..
T Consensus 81 ~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~ 121 (129)
T 2xev_A 81 KLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQS 121 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHH
Confidence 99999999999999999999999999998877666555543
No 33
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=2.7e-15 Score=115.68 Aligned_cols=113 Identities=27% Similarity=0.424 Sum_probs=107.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 78 (281)
+..++..|..++..|+|++|+.+|.+++..+|++ ..++.++|.+|..+|+|++|+..+++++.++|.+..+++.+|.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 107 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQ 107 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHH
Confidence 4578899999999999999999999999999998 8999999999999999999999999999999999999999999
Q ss_pred HHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023550 79 ACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 79 ~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (281)
+++.+|++++|+.+|++++.++|++..++..+..+.
T Consensus 108 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 108 ALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 999999999999999999999999998888777764
No 34
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.66 E-value=2.3e-15 Score=125.62 Aligned_cols=118 Identities=15% Similarity=0.175 Sum_probs=96.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|++++..+|+++.++.++|.++..+|++++|+..+++++.++|++..+++.+|.++..
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~ 85 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVA 85 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 46777888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred h-----------hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 83 L-----------EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~-----------g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+ |++++|+.+|+++++++|++..++..++.+...+++.
T Consensus 86 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~ 134 (217)
T 2pl2_A 86 LYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGER 134 (217)
T ss_dssp HHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCh
Confidence 8 8888888888888888888887777777766555443
No 35
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.65 E-value=7.9e-15 Score=115.20 Aligned_cols=114 Identities=32% Similarity=0.510 Sum_probs=107.6
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|.+++..+|.+..++.++|.++..+|++++|+..+++++.++|.+..+++.+|.++.
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHH
Q 023550 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (281)
.+|++++|+.+|++++.++|.+...+..+..+..
T Consensus 93 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~ 126 (166)
T 1a17_A 93 ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 126 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999888766666643
No 36
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.64 E-value=2.1e-15 Score=147.36 Aligned_cols=116 Identities=18% Similarity=0.202 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.+...|..+...|+|++|+..|+++++++|+++.+|.++|.+|..+|++++|++.|+++++++|++..+|+.+|.+|..+
T Consensus 45 a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~ 124 (723)
T 4gyw_A 45 AHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDS 124 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 34445555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 84 g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
|++++|+.+|+++++++|++..++..++.+...+++
T Consensus 125 g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~ 160 (723)
T 4gyw_A 125 GNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCD 160 (723)
T ss_dssp TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhccc
Confidence 555555555555555555555555555555444443
No 37
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.64 E-value=2.1e-15 Score=136.47 Aligned_cols=119 Identities=24% Similarity=0.442 Sum_probs=113.3
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHh----------------cCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE----------------ISPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~----------------~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l 65 (281)
+..++..|+.++..|+|++|+..|++++. .+|.+..+|.++|.+|+++|+|++|+.++++++++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999998 77888899999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 66 ~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|.+..+++++|.+|+.+|+|++|+.+|+++++++|++..++..+..+...+++.
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~ 357 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQ 357 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888776
No 38
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.64 E-value=6.6e-15 Score=110.54 Aligned_cols=118 Identities=19% Similarity=0.281 Sum_probs=110.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc-------HHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM-------SKAYW 74 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~-------~~a~~ 74 (281)
+..++..|..++..|+|++|+..|.+++..+|.+..++..+|.++..+|++++|+..+++++.+.|.+ ..+++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999998877 89999
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.+|.++..+|++++|+.+|++++.+.| +......+..+...++..
T Consensus 84 ~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 84 RIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999 688888888888877654
No 39
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.63 E-value=3.9e-16 Score=123.03 Aligned_cols=113 Identities=11% Similarity=-0.094 Sum_probs=104.0
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHH
Q 023550 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYE 87 (281)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~ 87 (281)
.|..+...|++++|+..|.+++..+|+++..++.+|.+|+.+|+|++|+..++++++++|+++.+|+.+|.+|..+|+++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~ 82 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTD 82 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchH
Confidence 57778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 88 TAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 88 ~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|+.+|+++++++|++..++..++.+...+++.
T Consensus 83 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~ 115 (150)
T 4ga2_A 83 KAVECYRRSVELNPTQKDLVLKIAELLCKNDVT 115 (150)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCh
Confidence 999999999999999999999999887766553
No 40
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.62 E-value=1.7e-14 Score=120.25 Aligned_cols=108 Identities=17% Similarity=0.324 Sum_probs=102.3
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISP-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p-~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
++.++..|..++..|+|++|+..|.+++..+| .+..+++++|.++..+|++++|+..+++++.++|.+..+++.+|.+|
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 86 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAY 86 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 35789999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HHhhcHHHHHHHHHHhhhcCCCChhHHHH
Q 023550 81 MKLEEYETAKVALEKGASLAPGDSRFTNL 109 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~~l~p~~~~~~~~ 109 (281)
..+|++++|+.+|+++++++|++..+...
T Consensus 87 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 115 (228)
T 4i17_A 87 RDMKNNQEYIATLTEGIKAVPGNATIEKL 115 (228)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHcccHHHHHHHHHHHHHHCCCcHHHHHH
Confidence 99999999999999999999999955333
No 41
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.62 E-value=3e-14 Score=105.82 Aligned_cols=114 Identities=21% Similarity=0.384 Sum_probs=108.3
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|++..++..+|.++...|++++|+..+++++.++|.+..+++.+|.+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 89 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK 89 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (281)
.|++++|..+|++++..+|++..+...++.+...
T Consensus 90 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 90 QGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 9999999999999999999999888888877654
No 42
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.61 E-value=1.3e-14 Score=121.01 Aligned_cols=117 Identities=13% Similarity=0.107 Sum_probs=98.3
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHcCCCcHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-----------QNFTEAVADANRAIELEPSMSK 71 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l-----------~~~~~A~~~~~~al~l~p~~~~ 71 (281)
..++..|..++..|++++|+..|++++..+|++..++.++|.++..+ |++++|+..++++++++|++..
T Consensus 40 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~ 119 (217)
T 2pl2_A 40 EALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAP 119 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHH
Confidence 45777888888888888888888888888888888888888888888 8888888888888888888888
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 72 AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 72 a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+++.+|.++..+|++++|+.+|+++++++ ++..++..++.+...+++.
T Consensus 120 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~ 167 (217)
T 2pl2_A 120 LHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRL 167 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCH
Confidence 88888888888888888888888888888 7777777777777666554
No 43
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.61 E-value=5.2e-15 Score=134.46 Aligned_cols=116 Identities=13% Similarity=0.032 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~-~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
.+...|..+...|+|++|+..|++++.++|++..+|.+||.++..+|+ +++|+.++++++.++|++..+|+.+|.++..
T Consensus 99 a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~ 178 (382)
T 2h6f_A 99 VYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEW 178 (382)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 455556666666666666666666666666666666666666666664 6666666666666666666666666666666
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
+|++++|+.+|+++++++|++..++..++.+...+++
T Consensus 179 ~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~ 215 (382)
T 2h6f_A 179 LRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKL 215 (382)
T ss_dssp HTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCC
Confidence 6666666666666666666666666666655555443
No 44
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.61 E-value=7.5e-15 Score=143.52 Aligned_cols=119 Identities=18% Similarity=0.221 Sum_probs=114.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
++.+...|..+...|+|++|+.+|+++++++|++..++.++|.+|.++|++++|+..|++|++++|++..+|+.+|.+|.
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~ 88 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLK 88 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.+|++++|+.+|+++++++|++..++..++.+...+++.
T Consensus 89 ~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~ 127 (723)
T 4gyw_A 89 EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNI 127 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 999999999999999999999999999999888776654
No 45
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.60 E-value=2.5e-14 Score=115.08 Aligned_cols=118 Identities=19% Similarity=0.207 Sum_probs=87.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHH----------
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSK---------- 71 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~---------- 71 (281)
+..++..|..++..|+|++|+..|+++++.+|+++.++..+|.+|..+|++++|+..+.+++...|.+..
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 4568899999999999999999999999999999999999999999998888888777777766665444
Q ss_pred ------------------------HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 72 ------------------------AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 72 ------------------------a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
+++.+|.+|..+|++++|+.+|+++++++|.+..++..++.+...+++
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~ 156 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGL 156 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCC
Confidence 455555555555555555555555555555555555555555544444
No 46
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.60 E-value=6.5e-15 Score=116.77 Aligned_cols=107 Identities=14% Similarity=0.221 Sum_probs=97.6
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 12 AFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNF----------TEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 12 ~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~----------~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
.-+.+.|++|+..|.+++.++|+++++|.++|.++..++++ ++|+..|++||+++|++..+|+.+|.+|.
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 44667899999999999999999999999999999999875 59999999999999999999999999999
Q ss_pred Hhh-----------cHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023550 82 KLE-----------EYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 82 ~~g-----------~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (281)
.+| +|++|+.+|++|++++|++..++..+..+.....
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~e 139 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQ 139 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCHh
Confidence 885 8999999999999999999988887777655443
No 47
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.60 E-value=6.4e-15 Score=133.87 Aligned_cols=115 Identities=7% Similarity=-0.031 Sum_probs=110.1
Q ss_pred hhHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDY-FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~-y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
+..++.+|..+...|+ |++|+..|++++.++|++..+|.++|.++..+|++++|+.+|++++.++|.+..+|+.+|.++
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~ 210 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVI 210 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHH
Confidence 3568899999999996 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023550 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (281)
..+|++++|+.+|+++++++|++..++..++.+...
T Consensus 211 ~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 211 QEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp HHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999988888766
No 48
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.59 E-value=2.2e-15 Score=134.56 Aligned_cols=118 Identities=22% Similarity=0.296 Sum_probs=93.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH-----------------HHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA-----------------ELFADRAQASIKLQNFTEAVADANRAIE 64 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~-----------------~~~~~~a~~~~~l~~~~~A~~~~~~al~ 64 (281)
+..++..|+.++..|+|++|+..|.+++...|++. .+++++|.||+++|+|++|+.+|++++.
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999877 4899999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 65 LEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 65 l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
++|.+..+++++|.+|+.+|+|++|+.+|+++++++|++..++..+..+......
T Consensus 259 ~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~ 313 (338)
T 2if4_A 259 EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKA 313 (338)
T ss_dssp HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------------
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998888888554443
No 49
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.58 E-value=2.2e-14 Score=124.56 Aligned_cols=102 Identities=28% Similarity=0.416 Sum_probs=99.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|++++..+|+++.++.++|.+|..+|++++|+.++++++.++|++..+++.+|.+|.
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 83 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCC
Q 023550 82 KLEEYETAKVALEKGASLAPGD 103 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~ 103 (281)
.+|++++|+.+|+++++++|++
T Consensus 84 ~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 84 EMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999876
No 50
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.58 E-value=4.5e-14 Score=117.63 Aligned_cols=117 Identities=14% Similarity=0.083 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcH-------HHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS-------KAYWRK 76 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~-------~a~~~~ 76 (281)
.++..|..++..|+|++|+..|.+++..+|++..++..+|.+|..+|++++|+..+++++.++|.+. .+++.+
T Consensus 44 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~ 123 (228)
T 4i17_A 44 TAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKE 123 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH
Confidence 5677999999999999999999999999999999999999999999999999999999999999998 679999
Q ss_pred HHHHHHhhcHHHHHHHHHHhhhcCCC--ChhHHHHHHHHHHHHHhh
Q 023550 77 ATACMKLEEYETAKVALEKGASLAPG--DSRFTNLIKECEERIAEE 120 (281)
Q Consensus 77 g~~~~~~g~~~~A~~~~~~a~~l~p~--~~~~~~~l~~~~~~l~~~ 120 (281)
|.++..+|++++|+.+|+++++++|+ +...+..++.+...++..
T Consensus 124 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 124 GQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 888888888887766654
No 51
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.57 E-value=2e-14 Score=105.03 Aligned_cols=102 Identities=17% Similarity=0.201 Sum_probs=97.8
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC--cHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS--MSKAYWRKATAC 80 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~--~~~a~~~~g~~~ 80 (281)
..++..|..++..|+|++|+..|.+++..+|.+..++.++|.++..+|++++|+..+++++.++|. +..+++.+|.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~ 86 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADAL 86 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHh-hcHHHHHHHHHHhhhcCCCCh
Q 023550 81 MKL-EEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 81 ~~~-g~~~~A~~~~~~a~~l~p~~~ 104 (281)
..+ |++++|+.+|++++...|.+.
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 87 RYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp TTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999 999999999999999999764
No 52
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.56 E-value=1.6e-13 Score=113.60 Aligned_cols=106 Identities=16% Similarity=0.154 Sum_probs=93.8
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh----
Q 023550 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL---- 83 (281)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~---- 83 (281)
.|..++..|+|++|+..|.+++..+|+++.++.++|.++..+|++++|+..|++++.++|++..+++.+|.+|+..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999988888887776543
Q ss_pred -------------------------------hcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023550 84 -------------------------------EEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 84 -------------------------------g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (281)
|+|++|+.+|+++++++|+.. ....+.++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~-~~~~l~~i~ 200 (208)
T 3urz_A 140 KKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE-AQKTLDKIL 200 (208)
T ss_dssp HHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH-HHHHHHHHH
Confidence 468899999999999999743 444555543
No 53
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.56 E-value=6e-15 Score=110.80 Aligned_cols=101 Identities=17% Similarity=0.092 Sum_probs=90.2
Q ss_pred HhcCHHHHHHHHHHHHhc---CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHH
Q 023550 14 IDDYFELAYDLYSQAIEI---SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAK 90 (281)
Q Consensus 14 ~~~~y~~Al~~y~~al~~---~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~ 90 (281)
..|+|++|+..|.+++.. +|++..++.++|.+|..+|+|++|+..++++++++|++..+++.+|.+++.+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468999999999999999 68889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCChhHHHHHHHHH
Q 023550 91 VALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 91 ~~~~~a~~l~p~~~~~~~~l~~~~ 114 (281)
.+|++++...|+++.+......+.
T Consensus 82 ~~~~~al~~~p~~~~~~~~~~ai~ 105 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQSYKQAIL 105 (117)
T ss_dssp HHHHHHHHHHCCCHHHHHTHHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHH
Confidence 999999999999988766555443
No 54
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.56 E-value=1.2e-13 Score=110.58 Aligned_cols=113 Identities=17% Similarity=0.163 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH-HHHccCH--HHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQA-SIKLQNF--TEAVADANRAIELEPSMSKAYWRKATA 79 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~-~~~l~~~--~~A~~~~~~al~l~p~~~~a~~~~g~~ 79 (281)
..++..|..++..|+|++|+..|.+++..+|+++.++..+|.+ +...|++ ++|+..+++++.++|.+..+++.+|.+
T Consensus 45 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 124 (177)
T 2e2e_A 45 EQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASD 124 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4678899999999999999999999999999999999999999 8899999 999999999999999999999999999
Q ss_pred HHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHH
Q 023550 80 CMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 80 ~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (281)
++.+|++++|+.+|++++.++|++......+..+..
T Consensus 125 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~~ 160 (177)
T 2e2e_A 125 AFMQANYAQAIELWQKVMDLNSPRINRTQLVESINM 160 (177)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHHH
Confidence 999999999999999999999998776665555544
No 55
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.54 E-value=2.5e-13 Score=109.16 Aligned_cols=102 Identities=15% Similarity=0.126 Sum_probs=96.8
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..+...++++.|+..+.+++..+|++..++..+|.+|..+|++++|+..|+++++++|.++.+++.+|.+|..
T Consensus 74 ~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~ 153 (184)
T 3vtx_A 74 EAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG 153 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH
Confidence 35677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCCh
Q 023550 83 LEEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~ 104 (281)
+|++++|+.+|+++++++|++.
T Consensus 154 ~g~~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 154 KGLRDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp TTCHHHHHHHHHHHHHTTHHHH
T ss_pred CCCHHHHHHHHHHHHhCCccCH
Confidence 9999999999999999999764
No 56
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.52 E-value=1.1e-14 Score=115.25 Aligned_cols=107 Identities=10% Similarity=-0.102 Sum_probs=98.5
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHH
Q 023550 14 IDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVAL 93 (281)
Q Consensus 14 ~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~ 93 (281)
..+++-.+-..|.+++..+|++...++.+|.++..+|+|++|+..|++++.++|.++.+|+.+|.+|..+|+|++|+.+|
T Consensus 14 ~l~~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~ 93 (151)
T 3gyz_A 14 AVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLY 93 (151)
T ss_dssp HHHHHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHH
Confidence 33444455566888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 94 EKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 94 ~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+++++++|+++.++..++.|...+++.
T Consensus 94 ~~al~l~P~~~~~~~~lg~~~~~lg~~ 120 (151)
T 3gyz_A 94 AVAFALGKNDYTPVFHTGQCQLRLKAP 120 (151)
T ss_dssp HHHHHHSSSCCHHHHHHHHHHHHTTCH
T ss_pred HHHHhhCCCCcHHHHHHHHHHHHcCCH
Confidence 999999999999999999999888775
No 57
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.52 E-value=3.4e-14 Score=132.71 Aligned_cols=115 Identities=30% Similarity=0.501 Sum_probs=108.0
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|+++++.+|++..++.++|.+|..+|+|++|+.+++++++++|.+..+++++|.+|..
T Consensus 7 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~ 86 (477)
T 1wao_1 7 EELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMA 86 (477)
T ss_dssp TTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 34566788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (281)
+|++++|+.+|+++++++|++...+..++.+...+
T Consensus 87 ~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~ 121 (477)
T 1wao_1 87 LGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV 121 (477)
T ss_dssp HTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998884444
No 58
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.52 E-value=2.6e-13 Score=115.54 Aligned_cols=106 Identities=14% Similarity=0.144 Sum_probs=100.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC---cHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPS---MSKAYWR 75 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~---~~~a~~~ 75 (281)
++.++..|..++..|+|++|+..|.+++..+|++ ..+++.+|.+|+.+|+|++|+..|++++.+.|+ ...+++.
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~ 94 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYE 94 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHH
Confidence 4578999999999999999999999999999999 899999999999999999999999999999874 4789999
Q ss_pred HHHHHHH--------hhcHHHHHHHHHHhhhcCCCChhHH
Q 023550 76 KATACMK--------LEEYETAKVALEKGASLAPGDSRFT 107 (281)
Q Consensus 76 ~g~~~~~--------~g~~~~A~~~~~~a~~l~p~~~~~~ 107 (281)
+|.+++. +|++++|+..|+++++.+|++....
T Consensus 95 lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 95 RAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 9999999 9999999999999999999987766
No 59
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.51 E-value=4.8e-13 Score=100.23 Aligned_cols=117 Identities=21% Similarity=0.321 Sum_probs=108.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|++++|+..|.+++..+|++...+..+|.++...|++++|+..+++++..+|.+..+++.+|.++.
T Consensus 1 a~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 1 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023550 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (281)
..|++++|+..|++++...|.+......++.+....+
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 117 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG 117 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHc
Confidence 9999999999999999999998877777776655443
No 60
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.51 E-value=7.2e-13 Score=108.71 Aligned_cols=102 Identities=15% Similarity=0.085 Sum_probs=76.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcH------------
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS------------ 70 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~------------ 70 (281)
..++..|..++..|+|++|+..|.+++..+|++..++.++|.+|..+|++++|+..+++++.+.|.+.
T Consensus 38 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 117 (213)
T 1hh8_A 38 RICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFK 117 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCE
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccC
Confidence 34666777777777777777777777777777777777777777777777777777777777666554
Q ss_pred ----HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh
Q 023550 71 ----KAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 71 ----~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~ 104 (281)
.+++.+|.+++.+|++++|+.+|+++++++|++.
T Consensus 118 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 118 LFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp EEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred ccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 7777777777777777777777777777777654
No 61
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.50 E-value=2.7e-14 Score=104.90 Aligned_cols=95 Identities=19% Similarity=0.273 Sum_probs=86.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------HHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM------SKAYWR 75 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~~a~~~ 75 (281)
+..++..|..++..|+|++|+..|++++..+|+++.++.++|.++..+|++++|+.++++++.++|++ ..++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYR 83 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 45788899999999999999999999999999999999999999999999999999999999999998 899999
Q ss_pred HHHHHHHhhcHHHHHHHHHHh
Q 023550 76 KATACMKLEEYETAKVALEKG 96 (281)
Q Consensus 76 ~g~~~~~~g~~~~A~~~~~~a 96 (281)
+|.++..+|+++.|+..+++.
T Consensus 84 ~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 84 LELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHhHhhhHhHHHHh
Confidence 999999999888877665543
No 62
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.50 E-value=3.3e-13 Score=113.00 Aligned_cols=111 Identities=32% Similarity=0.470 Sum_probs=102.8
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 219 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA 219 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcC------CCChhHHHHHHHH
Q 023550 83 LEEYETAKVALEKGASLA------PGDSRFTNLIKEC 113 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~------p~~~~~~~~l~~~ 113 (281)
+|++++|..+|+++++++ |++..+...+.+|
T Consensus 220 ~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 220 VKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 999999999999999999 8888777777665
No 63
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.49 E-value=8.6e-13 Score=111.81 Aligned_cols=111 Identities=20% Similarity=0.095 Sum_probs=104.2
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.+|+.
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~ 123 (275)
T 1xnf_A 44 QLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY 123 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (281)
+|++++|+.+|+++++++|++.....++..+
T Consensus 124 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 124 GGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 9999999999999999999998665555443
No 64
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.49 E-value=4.8e-13 Score=109.79 Aligned_cols=115 Identities=19% Similarity=0.180 Sum_probs=104.3
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++ ++ ++.++.++|.+|..+|++++|+..+++++.++|.+..+++.+|.+|+.
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~ 83 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ 83 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 457889999999999999999999996 33 788999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCCh----------------hHHHHHHHHHHHHHhh
Q 023550 83 LEEYETAKVALEKGASLAPGDS----------------RFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~----------------~~~~~l~~~~~~l~~~ 120 (281)
+|++++|+.+|++++++.|.+. .++..++.+...+++.
T Consensus 84 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 137 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEW 137 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCH
T ss_pred cccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCH
Confidence 9999999999999999999877 6777777776665544
No 65
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.48 E-value=1.4e-12 Score=103.39 Aligned_cols=116 Identities=13% Similarity=0.147 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.+...|..++..|++++|+..|.+++..+|++..++..+|.++...|++++|+..+++++..+|.+..+++.+|.++...
T Consensus 44 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 123 (186)
T 3as5_A 44 VALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNL 123 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHc
Confidence 45667777777888888888888888777777777778888888888888888888888888877777888888888888
Q ss_pred hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 84 g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
|++++|+.+|++++..+|.+......++.+...+++
T Consensus 124 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 159 (186)
T 3as5_A 124 GRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGR 159 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCC
Confidence 888888888888888777777766666666655443
No 66
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.46 E-value=5.3e-13 Score=124.32 Aligned_cols=118 Identities=14% Similarity=0.021 Sum_probs=112.0
Q ss_pred hHHHHHHHHHHHh---------cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc--------cCHHHHHHHHHHHHHc
Q 023550 3 TDLEKKAKEAFID---------DYFELAYDLYSQAIEISPNSAELFADRAQASIKL--------QNFTEAVADANRAIEL 65 (281)
Q Consensus 3 ~~~~~~g~~~~~~---------~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l--------~~~~~A~~~~~~al~l 65 (281)
..+...|..+... |+|++|+..|.+++..+|++..++.++|.+|..+ |++++|+..|++++.+
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV 250 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 3567889999999 9999999999999999999999999999999999 9999999999999999
Q ss_pred CC---CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 66 EP---SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 66 ~p---~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+| .++.+|+.+|.+|..+|+|++|+.+|+++++++|++..++..+..+...+++.
T Consensus 251 ~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~ 308 (474)
T 4abn_A 251 DRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRL 308 (474)
T ss_dssp CGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 99 99999999999999999999999999999999999999888888888877765
No 67
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.46 E-value=2.8e-12 Score=112.18 Aligned_cols=116 Identities=19% Similarity=0.217 Sum_probs=108.9
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH----HHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE----LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~----~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
.+..|..++..|+|++|+..|.+++...|++.. ++..+|.++..+|++++|+..+++++.++|++..+++.+|.++
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAY 316 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 456699999999999999999999999999874 4667999999999999999999999999999999999999999
Q ss_pred HHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
..+|++++|..+|+++++++|++..++..+.+++..+++.
T Consensus 317 ~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 317 LIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQS 356 (359)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999888765
No 68
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.45 E-value=1.1e-12 Score=103.85 Aligned_cols=118 Identities=13% Similarity=0.050 Sum_probs=110.2
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|++++|+..|.+++..+|.+..++..+|.++...|++++|+..+++++.++|.+..+++.+|.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 88 (186)
T 3as5_A 9 VYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQ 88 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.|++++|..+|++++..+|.+..+...++.+...+++.
T Consensus 89 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 126 (186)
T 3as5_A 89 VQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRF 126 (186)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcH
Confidence 99999999999999999999988888887776655443
No 69
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.45 E-value=1.1e-12 Score=124.28 Aligned_cols=116 Identities=15% Similarity=0.082 Sum_probs=110.7
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..+...|..++..|+|++|+..|++++..+|++..++.++|.+|..+|++++|+..++++++++|++..+++.+|.+|.
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 102 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALE 102 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023550 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (281)
.+|++++|+.+|+++++++|++..+...++.+...+
T Consensus 103 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 103 DAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999998888888887776
No 70
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.45 E-value=2.1e-12 Score=107.90 Aligned_cols=107 Identities=17% Similarity=0.143 Sum_probs=98.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHH---HHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMSK---AYWR 75 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~---a~~~ 75 (281)
+..++.+|..++..|+|++|+..|++++...|++ ..+++.+|.+|+++|+|++|+..|+++++++|++.. +++.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 4578999999999999999999999999998887 478999999999999999999999999999998754 8999
Q ss_pred HHHHHHH------------------hhcHHHHHHHHHHhhhcCCCChhHHH
Q 023550 76 KATACMK------------------LEEYETAKVALEKGASLAPGDSRFTN 108 (281)
Q Consensus 76 ~g~~~~~------------------~g~~~~A~~~~~~a~~l~p~~~~~~~ 108 (281)
+|.+++. .|++++|+..|+++++.+|++..+..
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~ 134 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTD 134 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHH
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHH
Confidence 9999987 57999999999999999999986543
No 71
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.45 E-value=1.3e-12 Score=115.58 Aligned_cols=118 Identities=15% Similarity=0.195 Sum_probs=108.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.+++..+|+++.++..+|.++..+|++++|+..+++++.++|.+..+++.+|.+|..
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 297 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN 297 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCC-----------hhHHHHHHHHHHHHHhh
Q 023550 83 LEEYETAKVALEKGASLAPGD-----------SRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~-----------~~~~~~l~~~~~~l~~~ 120 (281)
+|++++|+.+|++++.++|++ ..++..++.+...+++.
T Consensus 298 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 346 (368)
T 1fch_A 298 LGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQS 346 (368)
T ss_dssp HTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCG
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCCh
Confidence 999999999999999999887 67788888888877765
No 72
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.45 E-value=1.6e-12 Score=96.81 Aligned_cols=102 Identities=15% Similarity=0.174 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023550 19 ELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 19 ~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
++|+..|.+++..+|+++.+++.+|.+|..+|++++|+..+++++.++|.+..+++.+|.+|..+|++++|+.+|++++.
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC--hhHHHHHHHHHHHHHhh
Q 023550 99 LAPGD--SRFTNLIKECEERIAEE 120 (281)
Q Consensus 99 l~p~~--~~~~~~l~~~~~~l~~~ 120 (281)
++|.+ ......+......++..
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~l~~~ 105 (115)
T 2kat_A 82 AAQSRGDQQVVKELQVFLRRLARE 105 (115)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hccccccHHHHHHHHHHHHHhccc
Confidence 98753 34455555555555554
No 73
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.45 E-value=2.5e-13 Score=132.10 Aligned_cols=117 Identities=9% Similarity=-0.083 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++.+|..++..|+|++|+..|++++..+|++..+++++|.+|..+|+|++|+..|+++++++|++..+++.+|.+|..
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~ 513 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL 513 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 46778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|+|++ +.+|+++++++|++..++..++.+...+++.
T Consensus 514 ~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~ 550 (681)
T 2pzi_A 514 AGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDR 550 (681)
T ss_dssp HTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred cCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCH
Confidence 999999 9999999999998888888888887776655
No 74
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.44 E-value=1.2e-12 Score=109.48 Aligned_cols=119 Identities=15% Similarity=0.172 Sum_probs=110.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHh--------------------------cCCCCHHHHHHHHHHHHHccCHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE--------------------------ISPNSAELFADRAQASIKLQNFTEA 55 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~--------------------------~~p~~~~~~~~~a~~~~~l~~~~~A 55 (281)
+..+...|..+...|+|++|+..|.+++. .+|.+..++..+|.++...|++++|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 35678889999999999999999999999 6777788999999999999999999
Q ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 56 VADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 56 ~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+..+++++.++|.+..+++.+|.++..+|++++|+.+|+++++.+|++...+..++.+...+++.
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~ 223 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEY 223 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999888888887776654
No 75
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.44 E-value=8.8e-13 Score=122.83 Aligned_cols=115 Identities=15% Similarity=0.071 Sum_probs=109.9
Q ss_pred hhHHHHHHHHHHHhcCH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYF-ELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y-~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
+..++..|..++..|+| ++|+.+|.+++..+|+++.++..+|.+|..+|++++|+..|++++.++|+ ..+++.+|.+|
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~ 180 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVL 180 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHH
Confidence 45688999999999999 99999999999999999999999999999999999999999999999999 69999999999
Q ss_pred HHh---------hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023550 81 MKL---------EEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 81 ~~~---------g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (281)
..+ |++++|+.+|+++++++|++..++..++.+...+
T Consensus 181 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 226 (474)
T 4abn_A 181 RQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSL 226 (474)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999998888888766
No 76
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.44 E-value=1.2e-12 Score=116.33 Aligned_cols=118 Identities=16% Similarity=0.229 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..+...|+|++|+..|.+++..+|+++.++.++|.++..+|++++|+..+++++.++|.+..+++.+|.+|..
T Consensus 214 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 293 (365)
T 4eqf_A 214 DLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCIN 293 (365)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 34666777777888888888888888888888887888888888888888888888888888888878888888888888
Q ss_pred hhcHHHHHHHHHHhhhcCCCC------------hhHHHHHHHHHHHHHhh
Q 023550 83 LEEYETAKVALEKGASLAPGD------------SRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~------------~~~~~~l~~~~~~l~~~ 120 (281)
+|++++|+.+|+++++++|++ ..++..++.+...+++.
T Consensus 294 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 343 (365)
T 4eqf_A 294 LGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQP 343 (365)
T ss_dssp HTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCH
T ss_pred CCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcH
Confidence 888888888888888777662 44566666666655544
No 77
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.44 E-value=2.4e-12 Score=107.06 Aligned_cols=109 Identities=15% Similarity=0.148 Sum_probs=53.2
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhc
Q 023550 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEE 85 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~ 85 (281)
...|..++..|++++|+..|.+++..+|.+..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.+++..|+
T Consensus 95 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 174 (243)
T 2q7f_A 95 YGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGM 174 (243)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCC
Confidence 34444444444444444444444444444444444444444444555555555555544444444444445555555555
Q ss_pred HHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023550 86 YETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 86 ~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (281)
+++|+..|++++..+|.+...+..++.+.
T Consensus 175 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 203 (243)
T 2q7f_A 175 LDEALSQFAAVTEQDPGHADAFYNAGVTY 203 (243)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 55555555555444444444444444443
No 78
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.44 E-value=3.7e-12 Score=105.85 Aligned_cols=118 Identities=16% Similarity=0.146 Sum_probs=103.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|++++|+..|.+++..+|.+..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++..
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 137 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK 137 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|++++|+..|++++..+|.+..+...++.+....++.
T Consensus 138 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (243)
T 2q7f_A 138 LEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGML 175 (243)
T ss_dssp TSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred hccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCH
Confidence 99999999999999999998888777777776655543
No 79
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.43 E-value=2.8e-12 Score=112.27 Aligned_cols=110 Identities=14% Similarity=0.179 Sum_probs=104.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
++.++..|..++..|+|++|+..|.+++..+|+++.++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++.
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 82 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLL 82 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCC---CChhHHHHHH
Q 023550 82 KLEEYETAKVALEKGASLAP---GDSRFTNLIK 111 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p---~~~~~~~~l~ 111 (281)
..|++++|+..|++++.++| ++...+..+.
T Consensus 83 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~ 115 (359)
T 3ieg_A 83 KQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLV 115 (359)
T ss_dssp HHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcCCcccChHHHHHHHH
Confidence 99999999999999999999 7777766653
No 80
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.43 E-value=1.7e-12 Score=112.86 Aligned_cols=118 Identities=14% Similarity=0.050 Sum_probs=104.2
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHH------------------------
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVAD------------------------ 58 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~------------------------ 58 (281)
+.++..|..+...|++++|+..|++++..+|+++.+++.+|.++..+|++++|+..
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~ 197 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLX 197 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHh
Confidence 45788999999999999999999999999999999999999999999999987654
Q ss_pred ----------HHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC--hhHHHHHHHHHHHHHhh
Q 023550 59 ----------ANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD--SRFTNLIKECEERIAEE 120 (281)
Q Consensus 59 ----------~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~--~~~~~~l~~~~~~l~~~ 120 (281)
+++++.++|++..+++.+|.+|...|++++|+..|.++++.+|++ ..++..+..+...+++.
T Consensus 198 ~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~ 271 (287)
T 3qou_A 198 QAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTG 271 (287)
T ss_dssp HHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTT
T ss_pred hcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCC
Confidence 445567789999999999999999999999999999999999988 66778888777766553
No 81
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.43 E-value=4.6e-13 Score=102.25 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=87.0
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhH
Q 023550 27 QAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 106 (281)
Q Consensus 27 ~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~ 106 (281)
++..++|+.+..+.++|.+|++.|+|++|+..|+++++++|.+..+|+.+|.+|+.+|++++|+.+|+++++++|++..+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 34457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 023550 107 TNLIKECEERIAEE 120 (281)
Q Consensus 107 ~~~l~~~~~~l~~~ 120 (281)
+..++.+...+++.
T Consensus 84 ~~~lg~~~~~~~~~ 97 (126)
T 4gco_A 84 YIRKAACLVAMREW 97 (126)
T ss_dssp HHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHCCCH
Confidence 99999998877665
No 82
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.43 E-value=1.8e-12 Score=109.94 Aligned_cols=117 Identities=16% Similarity=0.129 Sum_probs=88.0
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..+...|+|++|+..|.+++..+|++..++..+|.+|..+|++++|+..+++++.++|.+..+++.+|..++.
T Consensus 75 ~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 154 (272)
T 3u4t_A 75 ADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY 154 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 34667777777778888888888888777777777777788888888888888888888877777777777777744455
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
.+++++|+.+|+++++++|++.....+++.+...++.
T Consensus 155 ~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 155 NKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDP 191 (272)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCc
Confidence 5578888888888888877777777777776665543
No 83
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.41 E-value=4.6e-12 Score=103.75 Aligned_cols=112 Identities=13% Similarity=0.031 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.++..|..++..|++++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++...
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 89 (225)
T 2vq2_A 10 IKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGR 89 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Confidence 45556666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred -hcHHHHHHHHHHhhh--cCCCChhHHHHHHHHHH
Q 023550 84 -EEYETAKVALEKGAS--LAPGDSRFTNLIKECEE 115 (281)
Q Consensus 84 -g~~~~A~~~~~~a~~--l~p~~~~~~~~l~~~~~ 115 (281)
|++++|+.+|++++. ..|.+...+..++.+..
T Consensus 90 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 124 (225)
T 2vq2_A 90 LNRPAESMAYFDKALADPTYPTPYIANLNKGICSA 124 (225)
T ss_dssp TCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHH
Confidence 666666666666666 33433444444444443
No 84
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.41 E-value=2.7e-12 Score=109.16 Aligned_cols=116 Identities=18% Similarity=0.085 Sum_probs=104.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHH--------ccCHHHHHHHHHHHHHcCCCcH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIK--------LQNFTEAVADANRAIELEPSMS 70 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---~~~~~~~a~~~~~--------l~~~~~A~~~~~~al~l~p~~~ 70 (281)
...++..|..++..|+|++|+..|.+++...|++ ..+++.+|.++.. +|++++|+..+++++.+.|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 3568899999999999999999999999998855 6789999999999 9999999999999999999876
Q ss_pred HHH-----------------HHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh---hHHHHHHHHHHHH
Q 023550 71 KAY-----------------WRKATACMKLEEYETAKVALEKGASLAPGDS---RFTNLIKECEERI 117 (281)
Q Consensus 71 ~a~-----------------~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~---~~~~~l~~~~~~l 117 (281)
.+. +.+|.+|+.+|+|++|+..|+++++.+|++. .+..+++.+...+
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 555 8999999999999999999999999999854 4677777777666
No 85
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.41 E-value=1e-12 Score=111.43 Aligned_cols=117 Identities=13% Similarity=0.033 Sum_probs=92.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc----HHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM----SKAYWRKAT 78 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~----~~a~~~~g~ 78 (281)
+.++..|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.. +.+ ..+++.+|.
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~~~~lg~ 82 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSK-VNATKAKSADFEYYGK 82 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTT-SCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-cCchhHHHHHHHHHHH
Confidence 346778888888888888888888888888888888888888888888888888888888873 322 455788888
Q ss_pred HHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 79 ACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 79 ~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
++..+|++++|+.+|+++++++|.+..++..++.+...+++.
T Consensus 83 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 124 (272)
T 3u4t_A 83 ILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNF 124 (272)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCH
T ss_pred HHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCH
Confidence 888888888888888888888888887777777777666554
No 86
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.41 E-value=1.9e-12 Score=114.92 Aligned_cols=115 Identities=16% Similarity=0.122 Sum_probs=103.0
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023550 6 EKKAKEAFIDDYFELAYDLYSQAIEISPN--SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~p~--~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
...|..+...|++++|+..|.+++..+|+ ++.++..+|.+|..+|++++|+..+++++.++|.+..+++.+|.+|..+
T Consensus 181 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 260 (365)
T 4eqf_A 181 RRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANG 260 (365)
T ss_dssp --------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 34588999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 84 g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
|++++|+.+|+++++++|++..++..++.+...+++.
T Consensus 261 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 297 (365)
T 4eqf_A 261 DRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAY 297 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCH
Confidence 9999999999999999999999999998888777654
No 87
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.41 E-value=3.7e-13 Score=105.66 Aligned_cols=99 Identities=17% Similarity=0.131 Sum_probs=93.4
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCC
Q 023550 22 YDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (281)
Q Consensus 22 l~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p 101 (281)
-..|.+++..+|++...++.+|.+++..|+|++|+..|++++.++|.+..+|+.+|.++..+|+|++|+.+|++++.++|
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 86 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI 86 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHhh
Q 023550 102 GDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 102 ~~~~~~~~l~~~~~~l~~~ 120 (281)
++..++..++.+...+++.
T Consensus 87 ~~~~~~~~lg~~~~~~g~~ 105 (148)
T 2vgx_A 87 XEPRFPFHAAECLLQXGEL 105 (148)
T ss_dssp TCTHHHHHHHHHHHHTTCH
T ss_pred CCchHHHHHHHHHHHcCCH
Confidence 9999999999888777665
No 88
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.41 E-value=5.1e-13 Score=129.88 Aligned_cols=112 Identities=10% Similarity=-0.064 Sum_probs=106.7
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++.+|..++..|+|++|+..|++++..+|+++.++.++|.+|..+|+|++ +..|+++++++|++..+++.+|.+|.
T Consensus 467 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~ 545 (681)
T 2pzi_A 467 WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARS 545 (681)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023550 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (281)
.+|++++|+.+|+++++++|++..++..++.+.
T Consensus 546 ~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 546 AEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 999999999999999999999988877777765
No 89
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.40 E-value=2.3e-12 Score=103.42 Aligned_cols=116 Identities=11% Similarity=0.068 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHH-----------------------
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADAN----------------------- 60 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~----------------------- 60 (281)
.++..|..++..|+|++|+..|++++..+|+++.++..+|.++..+|++++|+..++
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~ 87 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQ 87 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhh
Confidence 467788888888888888888888888888888888888888888888877765444
Q ss_pred -----------HHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC--hhHHHHHHHHHHHHHh
Q 023550 61 -----------RAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD--SRFTNLIKECEERIAE 119 (281)
Q Consensus 61 -----------~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~--~~~~~~l~~~~~~l~~ 119 (281)
+++.++|++..+++.+|.++...|++++|+.+|+++++.+|+. ..++..+..+...+++
T Consensus 88 ~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~ 159 (176)
T 2r5s_A 88 AAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQ 159 (176)
T ss_dssp HTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCS
T ss_pred cccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCC
Confidence 4445567778888888888888888888888888888888765 3466666666655544
No 90
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.40 E-value=7.5e-12 Score=102.44 Aligned_cols=117 Identities=16% Similarity=0.091 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc-cCHHHHHHHHHHHHH--cCCCcHHHHHHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-QNFTEAVADANRAIE--LEPSMSKAYWRKATAC 80 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l-~~~~~A~~~~~~al~--l~p~~~~a~~~~g~~~ 80 (281)
.+...|..++..|++++|+..|.+++..+|++..++..+|.++..+ |++++|+..+++++. ..|.+..+++.+|.++
T Consensus 44 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~ 123 (225)
T 2vq2_A 44 AWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICS 123 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHH
Confidence 4667788888888888888888888888888888888888888888 888888888888888 5666778888888888
Q ss_pred HHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
...|++++|+.+|+++++.+|.+..++..++.+...+++.
T Consensus 124 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 163 (225)
T 2vq2_A 124 AKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQL 163 (225)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCH
Confidence 8888888888888888888888877777777776655543
No 91
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.40 E-value=5.8e-12 Score=105.71 Aligned_cols=115 Identities=15% Similarity=0.102 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH--cCCCcHHHHHHHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE--LEPSMSKAYWRKATACM 81 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~--l~p~~~~a~~~~g~~~~ 81 (281)
.+...|..++..|++++|+..|.+++..+|.+..++..+|.++..+|++++|+..+++++. ..|.+..+++.+|.+++
T Consensus 73 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~ 152 (252)
T 2ho1_A 73 AHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSL 152 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHH
Confidence 4455666666666666666666666666666666666666666666666666666666666 56666666666666666
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023550 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (281)
..|++++|+.+|++++..+|.+..+...++.+...++
T Consensus 153 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g 189 (252)
T 2ho1_A 153 QMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKER 189 (252)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred HcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcC
Confidence 6666666666666666666666665555555554443
No 92
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.40 E-value=7.6e-12 Score=93.51 Aligned_cols=101 Identities=24% Similarity=0.396 Sum_probs=95.8
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|++++|+..|.+++...|.+..++..+|.++...|++++|+..+++++...|.+..+++.+|.++..
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 115 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 115 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 34677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCC
Q 023550 83 LEEYETAKVALEKGASLAPGD 103 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~ 103 (281)
.|++++|..+|.+++..+|++
T Consensus 116 ~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 116 QGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TTCHHHHHHHHHHHHHHSTTC
T ss_pred HccHHHHHHHHHHHHccCCCC
Confidence 999999999999999998863
No 93
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.40 E-value=3.6e-12 Score=106.99 Aligned_cols=118 Identities=17% Similarity=0.082 Sum_probs=108.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|.+++..+|.+..++..+|.++...|++++|+..+++++.++|.+..+++.+|.++.
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 116 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLY 116 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhh--cCCCChhHHHHHHHHHHHHHh
Q 023550 82 KLEEYETAKVALEKGAS--LAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~--l~p~~~~~~~~l~~~~~~l~~ 119 (281)
..|++++|+.+|++++. ..|.+..+...++.+...+++
T Consensus 117 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 156 (252)
T 2ho1_A 117 EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKK 156 (252)
T ss_dssp HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTC
T ss_pred HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCC
Confidence 99999999999999999 777777777777776655544
No 94
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.39 E-value=3.8e-12 Score=114.08 Aligned_cols=116 Identities=19% Similarity=0.160 Sum_probs=94.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|++++|+..|.+++..+|+++.++..+|.++.+.|++++|+..+++++.++|.+..++..+|.++..
T Consensus 238 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 317 (388)
T 1w3b_A 238 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE 317 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH
Confidence 35667788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (281)
.|++++|+..|+++++++|++......++.+....+
T Consensus 318 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 353 (388)
T 1w3b_A 318 QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 353 (388)
T ss_dssp TTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTT
T ss_pred cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcC
Confidence 888888888888888888888777777776655443
No 95
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.38 E-value=5.9e-12 Score=109.01 Aligned_cols=118 Identities=14% Similarity=0.223 Sum_probs=107.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|++++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++..
T Consensus 173 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 252 (327)
T 3cv0_A 173 QLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSN 252 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCC------------ChhHHHHHHHHHHHHHhh
Q 023550 83 LEEYETAKVALEKGASLAPG------------DSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~------------~~~~~~~l~~~~~~l~~~ 120 (281)
+|++++|..+|++++.++|. +...+..++.+...+++.
T Consensus 253 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 302 (327)
T 3cv0_A 253 MSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRP 302 (327)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCH
T ss_pred hccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCH
Confidence 99999999999999999998 667777788777766554
No 96
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.1e-11 Score=114.09 Aligned_cols=104 Identities=20% Similarity=0.301 Sum_probs=99.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
++.++.+|..++..|+|++|+..|++++..+| ++.++..+|.++..+|++++|+..+++++.++|.+..+++.+|.+|.
T Consensus 6 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 84 (514)
T 2gw1_A 6 ALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANE 84 (514)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 56889999999999999999999999999999 68999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhH
Q 023550 82 KLEEYETAKVALEKGASLAPGDSRF 106 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~~~ 106 (281)
.+|++++|+.+|++++..+|.+...
T Consensus 85 ~~g~~~~A~~~~~~~~~~~~~~~~~ 109 (514)
T 2gw1_A 85 GLGKFADAMFDLSVLSLNGDFNDAS 109 (514)
T ss_dssp HTTCHHHHHHHHHHHHHSSSCCGGG
T ss_pred HHhhHHHHHHHHHHHHhcCCCccch
Confidence 9999999999999999999866543
No 97
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.37 E-value=1.3e-11 Score=112.29 Aligned_cols=109 Identities=14% Similarity=0.197 Sum_probs=103.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|++++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.+|.
T Consensus 26 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 105 (450)
T 2y4t_A 26 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLL 105 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCCh---hHHHHH
Q 023550 82 KLEEYETAKVALEKGASLAPGDS---RFTNLI 110 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~---~~~~~l 110 (281)
.+|++++|+.+|++++.++|++. ..+..+
T Consensus 106 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l 137 (450)
T 2y4t_A 106 KQGKLDEAEDDFKKVLKSNPSENEEKEAQSQL 137 (450)
T ss_dssp HTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCCChhhHHHHHHH
Confidence 99999999999999999999887 655544
No 98
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.37 E-value=8.3e-12 Score=111.81 Aligned_cols=118 Identities=20% Similarity=0.196 Sum_probs=104.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..+...|+|++|+..|.+++..+|++..++.++|.++...|++++|+..+++++.++|.++.+++.+|.++..
T Consensus 204 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 283 (388)
T 1w3b_A 204 DAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKE 283 (388)
T ss_dssp HHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.|++++|+.+|+++++++|.+...+..+..+....++.
T Consensus 284 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 321 (388)
T 1w3b_A 284 KGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNI 321 (388)
T ss_dssp HSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCH
T ss_pred cCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCH
Confidence 99999999999999999999888887777776554443
No 99
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.37 E-value=1.6e-11 Score=111.55 Aligned_cols=116 Identities=18% Similarity=0.209 Sum_probs=109.1
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~----~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
+...|..++..|+|++|+..|.+++...|+++ .++..+|.++.++|++++|+..+++++.++|.+..+++.+|.+|
T Consensus 260 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 339 (450)
T 2y4t_A 260 LIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAY 339 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 34569999999999999999999999999985 47889999999999999999999999999999999999999999
Q ss_pred HHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
..+|++++|+.+|+++++++|++..++..+..+...++..
T Consensus 340 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 379 (450)
T 2y4t_A 340 LIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQS 379 (450)
T ss_dssp HHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999998887765
No 100
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.37 E-value=1e-11 Score=107.70 Aligned_cols=117 Identities=12% Similarity=-0.016 Sum_probs=97.6
Q ss_pred hHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDD-YFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 3 ~~~~~~g~~~~~~~-~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
..++..|..++..| ++++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.+.|.+..+++.+|.++.
T Consensus 91 ~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 170 (330)
T 3hym_B 91 VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYG 170 (330)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 35677888888888 88888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
..|++++|+.+|++++..+|.+..++..++.+....++
T Consensus 171 ~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~ 208 (330)
T 3hym_B 171 LTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGE 208 (330)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTC
T ss_pred HHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccc
Confidence 88888888888888888888888777777776665544
No 101
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.36 E-value=1e-12 Score=105.16 Aligned_cols=113 Identities=12% Similarity=0.118 Sum_probs=99.9
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHH-HHHhhcH
Q 023550 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-CMKLEEY 86 (281)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~~~~g~~ 86 (281)
.+..++..|+|++|+..|.+++..+|+++.++..+|.+|...|++++|+..|++++.++|.+..+++.+|.+ ++..|++
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~ 95 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQH 95 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTC
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCc
Confidence 344567789999999999999999999999999999999999999999999999999999999999999999 8899999
Q ss_pred --HHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 87 --ETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 87 --~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
++|+.+|++++.++|++..++..++.+...+++.
T Consensus 96 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 131 (177)
T 2e2e_A 96 MTAQTRAMIDKALALDSNEITALMLLASDAFMQANY 131 (177)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred chHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccH
Confidence 9999999999999999999888888887766554
No 102
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.36 E-value=6.6e-12 Score=104.86 Aligned_cols=118 Identities=11% Similarity=0.074 Sum_probs=103.5
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH---HHHHHHHHHHH------------------ccCHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE---LFADRAQASIK------------------LQNFTEAVADANR 61 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~---~~~~~a~~~~~------------------l~~~~~A~~~~~~ 61 (281)
..++..|..++..|+|++|+..|+++++.+|++.. +++.+|.++.. +|++++|+..+++
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 121 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSK 121 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHH
Confidence 46788999999999999999999999999999864 78899999886 5799999999999
Q ss_pred HHHcCCCcHHHH-----------------HHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh---hHHHHHHHHHHHHHhh
Q 023550 62 AIELEPSMSKAY-----------------WRKATACMKLEEYETAKVALEKGASLAPGDS---RFTNLIKECEERIAEE 120 (281)
Q Consensus 62 al~l~p~~~~a~-----------------~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~---~~~~~l~~~~~~l~~~ 120 (281)
++...|++..++ +.+|.+|+..|+|.+|+..|+++++..|+++ .+...++.+...+++.
T Consensus 122 ~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~ 200 (225)
T 2yhc_A 122 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMN 200 (225)
T ss_dssp HHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCc
Confidence 999999886544 6789999999999999999999999999986 4567777777766655
No 103
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.36 E-value=1.3e-11 Score=107.01 Aligned_cols=117 Identities=16% Similarity=0.119 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC---------CCcHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELE---------PSMSKAYW 74 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~---------p~~~~a~~ 74 (281)
.+...|..++..|++++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.+. |....+++
T Consensus 161 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 240 (330)
T 3hym_B 161 PMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLN 240 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHH
Confidence 345566667777777777777777777777777777777777777777777777777777664 45556777
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.+|.++..+|++++|+.+|+++++++|++..++..++.+...+++.
T Consensus 241 ~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~ 286 (330)
T 3hym_B 241 NLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNF 286 (330)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccH
Confidence 7777777777777777777777777777666666666666655554
No 104
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.35 E-value=1.8e-12 Score=100.41 Aligned_cols=98 Identities=14% Similarity=0.137 Sum_probs=90.0
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCC
Q 023550 23 DLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (281)
Q Consensus 23 ~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~ 102 (281)
..|.+++..+|++...++.+|.+++..|+|++|+..|++++.++|.+..+|+.+|.+|..+|+|++|+.+|++++.++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHhh
Q 023550 103 DSRFTNLIKECEERIAEE 120 (281)
Q Consensus 103 ~~~~~~~l~~~~~~l~~~ 120 (281)
+..++..++.+...+++.
T Consensus 85 ~~~~~~~lg~~~~~~g~~ 102 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDL 102 (142)
T ss_dssp CTHHHHHHHHHHHHTTCH
T ss_pred CcHHHHHHHHHHHHcCCH
Confidence 999999999888777665
No 105
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.35 E-value=1.2e-11 Score=109.41 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=100.7
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++..
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 144 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTN 144 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHH
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFT 107 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~ 107 (281)
+|++++|+..|++++.++|.+....
T Consensus 145 ~g~~~~A~~~~~~~~~~~~~~~~~~ 169 (368)
T 1fch_A 145 ESLQRQACEILRDWLRYTPAYAHLV 169 (368)
T ss_dssp TTCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred cCCHHHHHHHHHHHHHhCcCcHHHH
Confidence 9999999999999999999887654
No 106
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.35 E-value=3.3e-12 Score=92.21 Aligned_cols=92 Identities=18% Similarity=0.120 Sum_probs=81.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE-LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~-~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.+.+|..++..|+|++|+..|.+++..+|++.. +++++|.+|..+|++++|+..|++++.++|++..+++.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR-------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------
Confidence 467899999999999999999999999999999 99999999999999999999999999999999888754
Q ss_pred hcHHHHHHHHHHhhhcCCCCh
Q 023550 84 EEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 84 g~~~~A~~~~~~a~~l~p~~~ 104 (281)
+.+.+|+.+|+++...+|++.
T Consensus 75 ~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 75 KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHHHHCCTTHHHHCCS
T ss_pred HHHHHHHHHHHHHhccCcccc
Confidence 777888888888888877654
No 107
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.33 E-value=2.4e-11 Score=85.59 Aligned_cols=79 Identities=24% Similarity=0.350 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
++..|..++..|+|++|+..|.+++..+|++..++.++|.++..+|++++|+..+++++.++|.+..+++.+|.++..+
T Consensus 12 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 12 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 90 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 4445555555555555555555555555555555555555555555555555555555555555555555555555443
No 108
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.32 E-value=2.4e-11 Score=105.99 Aligned_cols=113 Identities=10% Similarity=-0.010 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHH--HHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQ--ASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~--~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
.+...|..+...|++++|+..|.+++..+|++....+..+. .+...|++++|+..|++++..+|.++.+++.+|.++.
T Consensus 132 ~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~ 211 (291)
T 3mkr_A 132 CMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHM 211 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 44556666666666666666666666666665433333232 2222356666666666666666666666666666666
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023550 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (281)
.+|++++|..+|++++.++|+++.++..+..+...
T Consensus 212 ~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~ 246 (291)
T 3mkr_A 212 AQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQH 246 (291)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 66666666666666666666666665555544443
No 109
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.31 E-value=9e-12 Score=115.74 Aligned_cols=103 Identities=25% Similarity=0.378 Sum_probs=92.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..++..|..++..|+|++|+..|++++..+|+++.++..+|.+|..+|++++|+..+++++.++|++..+++.+|.++.
T Consensus 25 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 104 (537)
T 3fp2_A 25 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANE 104 (537)
T ss_dssp HHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHHHHHhhhcCCCChh
Q 023550 82 KLEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 82 ~~g~~~~A~~~~~~a~~l~p~~~~ 105 (281)
.+|++++|+..|+ ++.++|+...
T Consensus 105 ~~g~~~~A~~~~~-~~~~~~~~~~ 127 (537)
T 3fp2_A 105 SLGNFTDAMFDLS-VLSLNGDFDG 127 (537)
T ss_dssp HHTCHHHHHHHHH-HHC-------
T ss_pred HcCCHHHHHHHHH-HHhcCCCCCh
Confidence 9999999999996 8888887654
No 110
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.30 E-value=4e-11 Score=104.50 Aligned_cols=100 Identities=8% Similarity=0.063 Sum_probs=92.1
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHH-HHH
Q 023550 13 FIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYET-AKV 91 (281)
Q Consensus 13 ~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~-A~~ 91 (281)
...|+|++|+..|++++..+|+++.++.++|.++.++|++++|+..+++++.++|+++.+++++|.++..+|++.+ +..
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~ 256 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNR 256 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHH
Confidence 3458999999999999999999999999999999999999999999999999999999999999999999999976 568
Q ss_pred HHHHhhhcCCCChhHHHHHHH
Q 023550 92 ALEKGASLAPGDSRFTNLIKE 112 (281)
Q Consensus 92 ~~~~a~~l~p~~~~~~~~l~~ 112 (281)
+++++++++|+++.+.....+
T Consensus 257 ~~~~~~~~~P~~~~~~d~~~~ 277 (291)
T 3mkr_A 257 YLSQLKDAHRSHPFIKEYRAK 277 (291)
T ss_dssp HHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHhCCCChHHHHHHHH
Confidence 999999999999977654333
No 111
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.30 E-value=2.6e-11 Score=104.96 Aligned_cols=108 Identities=11% Similarity=0.017 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++.+|..++..|+|++|+..|++++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++..
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 101 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 101 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHhhhcCCCChhHHHHH
Q 023550 83 LEEYETAKVALEKGASLAPGDSRFTNLI 110 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~~~~~l 110 (281)
.|++++|+..|++++..+|.+......+
T Consensus 102 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 129 (327)
T 3cv0_A 102 EHNANAALASLRAWLLSQPQYEQLGSVN 129 (327)
T ss_dssp TTCHHHHHHHHHHHHHTSTTTTTC----
T ss_pred cCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 9999999999999999999887665444
No 112
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.29 E-value=3.8e-11 Score=106.79 Aligned_cols=96 Identities=17% Similarity=0.156 Sum_probs=89.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..+...|.+++..|+|++|+..|++++..+|++..+++++|.+|..+|++++|+.+|+++++++|.+..+++.+|.++.
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~ 275 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQ 275 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 35688899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHH-HHHHHhh
Q 023550 82 KLEEYETAK-VALEKGA 97 (281)
Q Consensus 82 ~~g~~~~A~-~~~~~a~ 97 (281)
.+|++++|. ..|++.+
T Consensus 276 ~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 276 RIRRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 999999994 3454443
No 113
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.28 E-value=7.5e-11 Score=92.11 Aligned_cols=97 Identities=18% Similarity=0.247 Sum_probs=87.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHH--HHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWR--KATAC 80 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~--~g~~~ 80 (281)
..+...|..++..|+|++|+..|.+++..+|.++.++.++|.++..+|++++|+..+++++.++|.+..++.. ++..+
T Consensus 48 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~ 127 (166)
T 1a17_A 48 IYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKI 127 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4577889999999999999999999999999999999999999999999999999999999999999888855 45558
Q ss_pred HHhhcHHHHHHHHHHhhhc
Q 023550 81 MKLEEYETAKVALEKGASL 99 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~~l 99 (281)
...|++++|+..+.++..+
T Consensus 128 ~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 128 VKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccchHHH
Confidence 8999999999998876543
No 114
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.27 E-value=2.6e-11 Score=112.54 Aligned_cols=117 Identities=15% Similarity=0.173 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.++..|..++..|+|++|+..|.+++..+|+++.++..+|.++..+|++++|+..+++++.++|.+..+++.+|.+++.+
T Consensus 278 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 357 (537)
T 3fp2_A 278 SYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQ 357 (537)
T ss_dssp HHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 45667777888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 84 g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
|++++|+.+|++++..+|++..++..++.+...+++.
T Consensus 358 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 394 (537)
T 3fp2_A 358 GKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDF 394 (537)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCH
Confidence 8888888888888888888887777777776655443
No 115
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.26 E-value=6.7e-11 Score=112.04 Aligned_cols=103 Identities=14% Similarity=0.070 Sum_probs=99.0
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.+++..+|++..++.++|.+|..+|++++|+..++++++++|++..+++.+|.++..
T Consensus 58 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 137 (568)
T 2vsy_A 58 EAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRR 137 (568)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred h---hcHHHHHHHHHHhhhcCCCChh
Q 023550 83 L---EEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 83 ~---g~~~~A~~~~~~a~~l~p~~~~ 105 (281)
+ |++++|...|+++++.+|.+..
T Consensus 138 ~~~~g~~~~A~~~~~~al~~~p~~~~ 163 (568)
T 2vsy_A 138 LCDWRALDVLSAQVRAAVAQGVGAVE 163 (568)
T ss_dssp TTCCTTHHHHHHHHHHHHHHTCCCSC
T ss_pred hhccccHHHHHHHHHHHHhcCCcccC
Confidence 9 9999999999999999998644
No 116
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.26 E-value=2e-11 Score=103.28 Aligned_cols=109 Identities=14% Similarity=0.024 Sum_probs=99.8
Q ss_pred HHHhcCHHHHHHHHHHHHhcC----CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHH
Q 023550 12 AFIDDYFELAYDLYSQAIEIS----PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYE 87 (281)
Q Consensus 12 ~~~~~~y~~Al~~y~~al~~~----p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~ 87 (281)
+...|+|++|+..|.+++... |.++.++..+|.++...|++++|+..+++++.++|.+..+++.+|.++..+|+++
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~ 94 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFD 94 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHH
T ss_pred cCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHH
Confidence 345689999999999999973 4567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 88 TAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 88 ~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+|+.+|++++.++|.+..++..++.+...+++.
T Consensus 95 ~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~ 127 (275)
T 1xnf_A 95 AAYEAFDSVLELDPTYNYAHLNRGIALYYGGRD 127 (275)
T ss_dssp HHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhcCccccHHHHHHHHHHHHhccH
Confidence 999999999999999998888888887766554
No 117
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.25 E-value=4e-11 Score=104.21 Aligned_cols=118 Identities=14% Similarity=-0.008 Sum_probs=99.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHc-cCHHHHHHHHHHHHHcCCCc-----
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKL-QNFTEAVADANRAIELEPSM----- 69 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l-~~~~~A~~~~~~al~l~p~~----- 69 (281)
+..+...|..+...|+|++|+.+|.+++...+.. ..++.++|.+|... |++++|+..|++++.+.|.+
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~ 156 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVAL 156 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHH
Confidence 3467889999999999999999999999987653 46889999999995 99999999999999998754
Q ss_pred -HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhH-------HHHHHHHHHHHHh
Q 023550 70 -SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF-------TNLIKECEERIAE 119 (281)
Q Consensus 70 -~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~-------~~~l~~~~~~l~~ 119 (281)
..++..+|.++..+|+|++|+.+|++++.+.|++... ...++.|...+++
T Consensus 157 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~ 214 (292)
T 1qqe_A 157 SNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATD 214 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCC
Confidence 5688999999999999999999999999999887542 3445555554443
No 118
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.24 E-value=6e-11 Score=86.40 Aligned_cols=75 Identities=19% Similarity=0.228 Sum_probs=68.2
Q ss_pred cCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChh
Q 023550 31 ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 31 ~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~ 105 (281)
.+|+++.+++.+|.+|+.+|+|++|+..++++++++|++..+|+.+|.+|..+|++++|+.+|++++++.|.+..
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~ 76 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGT 76 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999775443
No 119
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.24 E-value=4.3e-11 Score=90.16 Aligned_cols=87 Identities=18% Similarity=0.135 Sum_probs=81.4
Q ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023550 34 NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 34 ~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (281)
.++..+..+|.+++..|+|++|+..|++++.++|.+..+++.+|.+++.+|+|++|+.+|+++++++|++...+..++.+
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHhh
Q 023550 114 EERIAEE 120 (281)
Q Consensus 114 ~~~l~~~ 120 (281)
...+++.
T Consensus 82 ~~~~~~~ 88 (126)
T 3upv_A 82 QIAVKEY 88 (126)
T ss_dssp HHHTTCH
T ss_pred HHHHhCH
Confidence 8776654
No 120
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.23 E-value=2.4e-10 Score=104.70 Aligned_cols=118 Identities=16% Similarity=0.106 Sum_probs=102.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc---------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC-------
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI---------SPNSAELFADRAQASIKLQNFTEAVADANRAIELE------- 66 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~---------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~------- 66 (281)
..+...|..++..|+|++|++.|.+|+++ +|.....|.++|.+|..+|++++|+.++++++.+.
T Consensus 52 ~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~ 131 (472)
T 4g1t_A 52 TMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPY 131 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccccc
Confidence 34567899999999999999999999886 67778889999999999999999999999999863
Q ss_pred -CCcHHHHHHHHHHHHHhh--cHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 67 -PSMSKAYWRKATACMKLE--EYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 67 -p~~~~a~~~~g~~~~~~g--~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+..+.++..+|.++...| +|++|+.+|+++++++|+++.+...++.+...++..
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~ 188 (472)
T 4g1t_A 132 RIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNW 188 (472)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHS
T ss_pred chhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc
Confidence 356788999998887764 799999999999999999999888888877666554
No 121
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.23 E-value=1.2e-10 Score=85.04 Aligned_cols=86 Identities=21% Similarity=0.242 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC------hhHHH
Q 023550 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTN 108 (281)
Q Consensus 35 ~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~------~~~~~ 108 (281)
++..+..+|.++...|+|++|+..|++++.++|.+..+++.+|.+++.+|++++|+.+|+++++++|++ .....
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999998 66777
Q ss_pred HHHHHHHHHHhh
Q 023550 109 LIKECEERIAEE 120 (281)
Q Consensus 109 ~l~~~~~~l~~~ 120 (281)
.++.+...++..
T Consensus 83 ~~~~~~~~~~~~ 94 (111)
T 2l6j_A 83 RLELAQGAVGSV 94 (111)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhH
Confidence 777777777754
No 122
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.22 E-value=4.6e-11 Score=91.01 Aligned_cols=85 Identities=24% Similarity=0.256 Sum_probs=73.8
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023550 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 35 ~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (281)
.+.++.++|.++++.|+|++|+..|++|+.++|++..+|+.+|.+|+.+|+|++|+.+|+++++++|++......+..+.
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~ 86 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAM 86 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999988765554444444
Q ss_pred HHHHh
Q 023550 115 ERIAE 119 (281)
Q Consensus 115 ~~l~~ 119 (281)
..++.
T Consensus 87 ~~lg~ 91 (127)
T 4gcn_A 87 SRAGN 91 (127)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 123
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.22 E-value=5.2e-11 Score=103.49 Aligned_cols=103 Identities=17% Similarity=0.068 Sum_probs=88.2
Q ss_pred hHHHHHHHHHHHh-cCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHH----
Q 023550 3 TDLEKKAKEAFID-DYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSMSK---- 71 (281)
Q Consensus 3 ~~~~~~g~~~~~~-~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~---- 71 (281)
..+...|..+... |+|++|+.+|++++...|.+ ..++.++|.++..+|+|++|+..|++++.+.|.+..
T Consensus 118 ~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 197 (292)
T 1qqe_A 118 NFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWS 197 (292)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGG
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHH
Confidence 4577889999996 99999999999999987754 567899999999999999999999999999987643
Q ss_pred ---HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChh
Q 023550 72 ---AYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 72 ---a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~ 105 (281)
+++.+|.++..+|++++|+.+|++++.++|+...
T Consensus 198 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 234 (292)
T 1qqe_A 198 LKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFAD 234 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCC
Confidence 6889999999999999999999999999998654
No 124
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.22 E-value=4.1e-11 Score=101.21 Aligned_cols=118 Identities=20% Similarity=0.213 Sum_probs=102.4
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------C
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL--------E 66 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~--------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l--------~ 66 (281)
..+...|..++..|+|++|+..|.+++.. .|....++.++|.++..+|++++|+..+.+++.+ +
T Consensus 44 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 123 (283)
T 3edt_B 44 TMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFH 123 (283)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCC
Confidence 45788999999999999999999999987 3556788999999999999999999999999998 5
Q ss_pred CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc--------CCCChhHHHHHHHHHHHHHhh
Q 023550 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL--------APGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 67 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l--------~p~~~~~~~~l~~~~~~l~~~ 120 (281)
|....+++.+|.+++.+|++++|+.+|++++.+ .|....+...++.+...+++.
T Consensus 124 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 185 (283)
T 3edt_B 124 PDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKY 185 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 777899999999999999999999999999998 555555666677776665554
No 125
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.21 E-value=1.6e-10 Score=108.85 Aligned_cols=116 Identities=15% Similarity=0.106 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc------CCCc-HHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIEL------EPSM-SKAYWRK 76 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l------~p~~-~~a~~~~ 76 (281)
.+...|..+...|++++|+..|++++..+|.++..|..+|.+|.+.|++++|+..+++++.+ +|.+ ..+|..+
T Consensus 443 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l 522 (597)
T 2xpi_A 443 PYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANL 522 (597)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHH
Confidence 45667777777777777777777777777777777777777777777777777777777776 4543 6677777
Q ss_pred HHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 77 ATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 77 g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
|.+|...|++++|+..|+++++++|++...+..+..+....++
T Consensus 523 ~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~ 565 (597)
T 2xpi_A 523 GHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKI 565 (597)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Confidence 7777777777777777777777777777777666666655544
No 126
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.21 E-value=1e-10 Score=82.26 Aligned_cols=84 Identities=24% Similarity=0.384 Sum_probs=78.2
Q ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023550 34 NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 34 ~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (281)
.+...+..+|.++...|++++|+..+++++.++|.+..+++.+|.++..+|++++|+.+|++++.++|++......++.+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999888888877
Q ss_pred HHHH
Q 023550 114 EERI 117 (281)
Q Consensus 114 ~~~l 117 (281)
...+
T Consensus 87 ~~~~ 90 (91)
T 1na3_A 87 KQKQ 90 (91)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6543
No 127
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.20 E-value=2.5e-10 Score=107.58 Aligned_cols=117 Identities=13% Similarity=0.028 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
.+...|..+.+.|++++|+..|.+++..+|.+...|..++.+|.+.|++++|+..|++++.++|.+..+++.+|.+|...
T Consensus 375 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 454 (597)
T 2xpi_A 375 TWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQL 454 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHc
Confidence 46677888889999999999999999989999889999999999999999999999999999998888999999999999
Q ss_pred hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 84 g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
|++++|+..|+++++.+|.+...+..+..+....++.
T Consensus 455 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 491 (597)
T 2xpi_A 455 GNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDM 491 (597)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCH
Confidence 9999999999999999988887777777766555443
No 128
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.17 E-value=2.2e-10 Score=100.15 Aligned_cols=113 Identities=10% Similarity=-0.010 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE-LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~-~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
.+...|..+...|++++|+..|++++...|.++. +|.++|.++.+.|++++|+..|+++++++|....+|+..+...+.
T Consensus 101 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~ 180 (308)
T 2ond_A 101 LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYY 180 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 4566777777777888888888888877777765 777777777777777777777777777777766666655555433
Q ss_pred -hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023550 83 -LEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 83 -~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (281)
.|++++|..+|+++++.+|++..++..+..+...
T Consensus 181 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 215 (308)
T 2ond_A 181 CSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 215 (308)
T ss_dssp TSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 5777777777777777777766666555554433
No 129
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.17 E-value=2.8e-10 Score=85.90 Aligned_cols=83 Identities=18% Similarity=0.160 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023550 38 LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 38 ~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (281)
.++.+|.+++..|++++|+..+++++.++|++..+|+.+|.++..+|++++|+.+|+++++++|++..++..++.+...+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred Hhh
Q 023550 118 AEE 120 (281)
Q Consensus 118 ~~~ 120 (281)
++.
T Consensus 99 g~~ 101 (121)
T 1hxi_A 99 HNA 101 (121)
T ss_dssp HHH
T ss_pred CCH
Confidence 775
No 130
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.16 E-value=1.8e-10 Score=103.42 Aligned_cols=117 Identities=10% Similarity=0.147 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHc------CCCcHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----ELFADRAQASIKLQNFTEAVADANRAIEL------EPSMSKA 72 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~----~~~~~~a~~~~~l~~~~~A~~~~~~al~l------~p~~~~a 72 (281)
..++..|..++..|+|++|+.+|.+++...|++. .++..+|.+|..+|++++|+..+++++.+ .+....+
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 128 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKS 128 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHH
Confidence 4577899999999999999999999999999986 57899999999999999999999999998 5777899
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHhhhc------CCCChhHHHHHHHHHHHHHh
Q 023550 73 YWRKATACMKLEEYETAKVALEKGASL------APGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 73 ~~~~g~~~~~~g~~~~A~~~~~~a~~l------~p~~~~~~~~l~~~~~~l~~ 119 (281)
++.+|.+|..+|++++|+.+|++++.+ .+........++.+...+++
T Consensus 129 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 129 SGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 999999999999999999999999988 34444466667777776666
No 131
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.16 E-value=1.5e-10 Score=91.36 Aligned_cols=89 Identities=13% Similarity=0.142 Sum_probs=82.9
Q ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHH
Q 023550 32 SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIK 111 (281)
Q Consensus 32 ~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~ 111 (281)
++.++..+..+|.+++..|+|++|+..|++++.++|.+..+++.+|.+|+.+|+|++|+.+|+++++++|++..++..++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHhh
Q 023550 112 ECEERIAEE 120 (281)
Q Consensus 112 ~~~~~l~~~ 120 (281)
.+...+++.
T Consensus 87 ~~~~~~g~~ 95 (164)
T 3sz7_A 87 LARFDMADY 95 (164)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHccCH
Confidence 888776654
No 132
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.16 E-value=2.2e-10 Score=106.22 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=82.9
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+..+.++|.++++.|+|++|+..|++++.++|++..+|+++|.+|..+|+|++|+.+|+++++++|++..++..++.++.
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~ 396 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQK 396 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcHHHHHHH
Q 023550 82 KLEEYETAKVA 92 (281)
Q Consensus 82 ~~g~~~~A~~~ 92 (281)
.++++++|...
T Consensus 397 ~~~~~~~a~~~ 407 (457)
T 1kt0_A 397 KAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988754
No 133
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.15 E-value=2.2e-10 Score=105.39 Aligned_cols=111 Identities=23% Similarity=0.186 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHH---ccCHHHHHHHHHHHHHcCCCcHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE------LFADRAQASIK---LQNFTEAVADANRAIELEPSMSKAYW 74 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~------~~~~~a~~~~~---l~~~~~A~~~~~~al~l~p~~~~a~~ 74 (281)
.+...|..++..|++++|+..|.+++..+|++.. ++..+|.++.. +|++++|+..+++++.++|.+..+++
T Consensus 374 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 453 (514)
T 2gw1_A 374 VPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKI 453 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 4556677777777777777777777777666643 67777777777 77777777777777777777777777
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023550 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (281)
.+|.++..+|++++|...|+++++++|++...+..+....
T Consensus 454 ~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 493 (514)
T 2gw1_A 454 GLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAE 493 (514)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 7777777777777777777777777777766655554443
No 134
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.15 E-value=3.3e-10 Score=85.98 Aligned_cols=91 Identities=18% Similarity=0.245 Sum_probs=83.4
Q ss_pred hcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHH
Q 023550 30 EISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNL 109 (281)
Q Consensus 30 ~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~ 109 (281)
..++.++..+..+|.+++..|+|++|+..+.+++.++|.+..+++.+|.+++.+|++++|+.+|+++++++|++..++..
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 82 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 82 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 023550 110 IKECEERIAEE 120 (281)
Q Consensus 110 l~~~~~~l~~~ 120 (281)
++.+...+++.
T Consensus 83 l~~~~~~~~~~ 93 (137)
T 3q49_B 83 LGQCQLEMESY 93 (137)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHHhhH
Confidence 88888776554
No 135
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.15 E-value=3.6e-10 Score=84.05 Aligned_cols=84 Identities=24% Similarity=0.173 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.+++..+|++..++..+|.++..+|++++|+..+++++.++|.+..+++.+|.++..
T Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 47 VYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK 126 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcH
Q 023550 83 LEEY 86 (281)
Q Consensus 83 ~g~~ 86 (281)
+|++
T Consensus 127 ~~~~ 130 (131)
T 2vyi_A 127 LREA 130 (131)
T ss_dssp HTTC
T ss_pred HhcC
Confidence 9875
No 136
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.15 E-value=8.3e-11 Score=109.68 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=90.7
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHH--
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-- 79 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-- 79 (281)
+..+...|..++..|+|++|+..|+++++.+|+++.+++++|.+|..+|++++|+..++++++++|++..++..++.+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~ 119 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 119 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 356788999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhhcHHHHHHHHH-----------HhhhcCCCC
Q 023550 80 CMKLEEYETAKVALE-----------KGASLAPGD 103 (281)
Q Consensus 80 ~~~~g~~~~A~~~~~-----------~a~~l~p~~ 103 (281)
+...|++++|+..++ +++.++|+.
T Consensus 120 ~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 120 IVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 899999999999999 777777653
No 137
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.15 E-value=9e-10 Score=96.16 Aligned_cols=106 Identities=13% Similarity=0.094 Sum_probs=95.4
Q ss_pred hHHHHHHHHHHH-------hcCH-------HHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC
Q 023550 3 TDLEKKAKEAFI-------DDYF-------ELAYDLYSQAIE-ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP 67 (281)
Q Consensus 3 ~~~~~~g~~~~~-------~~~y-------~~Al~~y~~al~-~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p 67 (281)
+.|+..|..+.. .|++ ++|+..|++++. .+|++..+|..+|.++..+|++++|...|+++++++|
T Consensus 51 ~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 130 (308)
T 2ond_A 51 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIED 130 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccc
Confidence 456677777663 4775 999999999999 7999999999999999999999999999999999999
Q ss_pred CcHH-HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHH
Q 023550 68 SMSK-AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (281)
Q Consensus 68 ~~~~-a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~ 108 (281)
.+.. +|..+|.++...|++++|+..|+++++.+|.+..++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 172 (308)
T 2ond_A 131 IDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYV 172 (308)
T ss_dssp SCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHH
T ss_pred cCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 9987 9999999999999999999999999999998765543
No 138
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.14 E-value=3.3e-10 Score=92.29 Aligned_cols=94 Identities=16% Similarity=0.077 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+..|.+++..+|++..+++++|.+|..+|++++|+..+++++.++|.+..++..++.++..
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 168 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 168 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHH-HHHHHh
Q 023550 83 LEEYETAK-VALEKG 96 (281)
Q Consensus 83 ~g~~~~A~-~~~~~a 96 (281)
++++.++. ..|...
T Consensus 169 ~~~~~~~~~~~~~~~ 183 (198)
T 2fbn_A 169 LKEARKKDKLTFGGM 183 (198)
T ss_dssp HHHHHC---------
T ss_pred HHHHHHHHHHHHHHH
Confidence 99998887 344433
No 139
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.14 E-value=7.4e-10 Score=105.43 Aligned_cols=116 Identities=7% Similarity=-0.015 Sum_probs=109.9
Q ss_pred hHHHHHHHHHHHhcC----------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHcCCCcH
Q 023550 3 TDLEKKAKEAFIDDY----------FELAYDLYSQAIEISPNSAELFADRAQASIKLQ--NFTEAVADANRAIELEPSMS 70 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~----------y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~--~~~~A~~~~~~al~l~p~~~ 70 (281)
..|..+|..+...++ |++|+..|++++..+|.+..+|..|+.++.+++ ++++++++++++++++|.+.
T Consensus 64 taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~ 143 (567)
T 1dce_A 64 TLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF 143 (567)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccc
Confidence 568889999998888 999999999999999999999999999999999 77999999999999999999
Q ss_pred HHHHHHHHHHHHhh-cHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHH
Q 023550 71 KAYWRKATACMKLE-EYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (281)
Q Consensus 71 ~a~~~~g~~~~~~g-~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (281)
.+|..++.++..+| .++++++++.++++.+|.+..+|..+..+...+.
T Consensus 144 ~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~ 192 (567)
T 1dce_A 144 HCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLH 192 (567)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhc
Confidence 99999999999999 9999999999999999999999999988876653
No 140
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.14 E-value=3.2e-10 Score=89.30 Aligned_cols=86 Identities=13% Similarity=0.051 Sum_probs=78.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcH-HHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS-KAYWRKATACM 81 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~-~a~~~~g~~~~ 81 (281)
..+...|.+++..|+|++|+..|++++..+|+++.+|+++|.+|..+|+|++|+.+|++++.++|++. .+...++.+..
T Consensus 64 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~ 143 (162)
T 3rkv_A 64 PLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTE 143 (162)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999998 66777787777
Q ss_pred HhhcHHH
Q 023550 82 KLEEYET 88 (281)
Q Consensus 82 ~~g~~~~ 88 (281)
.++++.+
T Consensus 144 ~~~~~~~ 150 (162)
T 3rkv_A 144 RRAEKKA 150 (162)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 7665543
No 141
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.13 E-value=4.2e-10 Score=96.90 Aligned_cols=117 Identities=9% Similarity=0.148 Sum_probs=101.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHc------CCCcHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----AELFADRAQASIKLQNFTEAVADANRAIEL------EPSMSKA 72 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~----~~~~~~~a~~~~~l~~~~~A~~~~~~al~l------~p~~~~a 72 (281)
..++..|..++..|+|++|+..|++++...|++ ..++..+|.++...|++++|+..+++++.+ .+....+
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 85 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKA 85 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 467889999999999999999999999999998 477889999999999999999999999987 4556889
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChh------HHHHHHHHHHHHHh
Q 023550 73 YWRKATACMKLEEYETAKVALEKGASLAPGDSR------FTNLIKECEERIAE 119 (281)
Q Consensus 73 ~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~------~~~~l~~~~~~l~~ 119 (281)
++.+|.++..+|++++|+.+|++++++.+.... ....++.+...+++
T Consensus 86 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 86 SGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 999999999999999999999999988665433 55566666666665
No 142
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.13 E-value=6.2e-10 Score=87.27 Aligned_cols=105 Identities=10% Similarity=0.076 Sum_probs=96.2
Q ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHcC-C-CcHHHHHHHHHHHHHhhcHHHHH
Q 023550 16 DYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ---NFTEAVADANRAIELE-P-SMSKAYWRKATACMKLEEYETAK 90 (281)
Q Consensus 16 ~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~---~~~~A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~g~~~~A~ 90 (281)
.....+.+.|.+.+..++.+.+..+++|.|+.+.+ ++.+++..++.+++.+ | ...+++|.+|.+|+++|+|++|+
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~ 91 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 91 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHH
Confidence 34567888899999889999999999999999998 7779999999999998 7 57899999999999999999999
Q ss_pred HHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 91 VALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 91 ~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.+++++++.+|++..+......+..++...
T Consensus 92 ~y~~~lL~ieP~n~QA~~Lk~~ie~~~~kd 121 (152)
T 1pc2_A 92 KYVRGLLQTEPQNNQAKELERLIDKAMKKD 121 (152)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998888774
No 143
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.12 E-value=6.8e-11 Score=105.30 Aligned_cols=102 Identities=11% Similarity=-0.010 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHH-HHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-CMK 82 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~~~ 82 (281)
.++..|.+++..|+|++|+..|++++..+|++..+++++|.+|..+|+|++|+.+|+++++++|++..++..++.+ ...
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~ 311 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQE 311 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999999999999999999999999999999999988 445
Q ss_pred hhcHHHHHHHHHHhhhcCCCChh
Q 023550 83 LEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~~~~ 105 (281)
.+.++.+...|.+++...|++..
T Consensus 312 ~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 312 KALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp -----------------------
T ss_pred HHHHHHHHHHHHHhhCCCCCCCC
Confidence 67788899999999999987753
No 144
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.12 E-value=5.1e-10 Score=83.84 Aligned_cols=83 Identities=18% Similarity=0.159 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|++..++.++|.++..+|++++|+..+++++.++|.+..+++.++.++..
T Consensus 51 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 51 KLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA 130 (133)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhc
Q 023550 83 LEE 85 (281)
Q Consensus 83 ~g~ 85 (281)
+|+
T Consensus 131 ~~~ 133 (133)
T 2lni_A 131 QYN 133 (133)
T ss_dssp HTC
T ss_pred hcC
Confidence 774
No 145
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.12 E-value=1.2e-10 Score=84.53 Aligned_cols=88 Identities=20% Similarity=0.214 Sum_probs=81.8
Q ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCC--ChhHHHH
Q 023550 32 SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG--DSRFTNL 109 (281)
Q Consensus 32 ~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~--~~~~~~~ 109 (281)
+|++..++..+|.++...|++++|+..+++++.++|.+..+++.+|.+++.+|++++|+.+|+++++++|. +..++..
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 68888899999999999999999999999999999999999999999999999999999999999999999 8888888
Q ss_pred HHHHHHHH-Hh
Q 023550 110 IKECEERI-AE 119 (281)
Q Consensus 110 l~~~~~~l-~~ 119 (281)
++.+...+ ++
T Consensus 82 l~~~~~~~~~~ 92 (112)
T 2kck_A 82 KADALRYIEGK 92 (112)
T ss_dssp HHHHHTTCSSC
T ss_pred HHHHHHHHhCC
Confidence 88877665 44
No 146
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.11 E-value=5.4e-10 Score=94.23 Aligned_cols=97 Identities=21% Similarity=0.192 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------C
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL--------E 66 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~--------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l--------~ 66 (281)
..+...|..++..|+|++|+.+|.+++.. +|....++.++|.++..+|++++|+..+++++.+ .
T Consensus 86 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 165 (283)
T 3edt_B 86 ATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDD 165 (283)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 45778899999999999999999999988 4666889999999999999999999999999998 7
Q ss_pred CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023550 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 67 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l 99 (281)
|....+++.+|.+|..+|++++|+.+|++++.+
T Consensus 166 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 166 PNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 778899999999999999999999999999986
No 147
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.11 E-value=4.4e-10 Score=100.11 Aligned_cols=118 Identities=9% Similarity=0.141 Sum_probs=102.7
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHc------CCCcHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----ELFADRAQASIKLQNFTEAVADANRAIEL------EPSMSK 71 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~----~~~~~~a~~~~~l~~~~~A~~~~~~al~l------~p~~~~ 71 (281)
+..++..|..++..|+|++|+.+|++++...|++. .++..+|.++..+|++++|+..+++++.+ .+....
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 88 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAK 88 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 45688999999999999999999999999999984 67889999999999999999999999987 345688
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChh------HHHHHHHHHHHHHh
Q 023550 72 AYWRKATACMKLEEYETAKVALEKGASLAPGDSR------FTNLIKECEERIAE 119 (281)
Q Consensus 72 a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~------~~~~l~~~~~~l~~ 119 (281)
+++.+|.++..+|++++|+.+|++++.+.+.... ....++.+...+++
T Consensus 89 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 89 ASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999998765322 56666677666666
No 148
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.10 E-value=3e-09 Score=90.53 Aligned_cols=108 Identities=11% Similarity=0.052 Sum_probs=81.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWRKA 77 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~----l~~~~~A~~~~~~al~l~p~~~~a~~~~g 77 (281)
+..++..|..++..|++++|+.+|.++++ +.+..++.++|.+|.. .+++++|+..+++++.++ +..+++.+|
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg 81 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLG 81 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHH
Confidence 34567778888888888888888888877 6677778888888888 888888888888887775 677788888
Q ss_pred HHHHH----hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHH
Q 023550 78 TACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 78 ~~~~~----~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (281)
.+|.. .+++++|+.+|++++..+ +......++.+..
T Consensus 82 ~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~ 121 (273)
T 1ouv_A 82 NLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYH 121 (273)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH
T ss_pred HHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHH
Confidence 88887 788888888888877764 5555555555544
No 149
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.09 E-value=6.9e-10 Score=82.71 Aligned_cols=72 Identities=11% Similarity=-0.038 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYW 74 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~ 74 (281)
..++..|..++..|+|++|+..|.+++..+|+++.++.++|.++..+|++++|+..+++++.+.|.+.....
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999977654
No 150
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.07 E-value=1.3e-09 Score=103.73 Aligned_cols=114 Identities=10% Similarity=-0.025 Sum_probs=107.3
Q ss_pred hHHHHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDD--YFELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATA 79 (281)
Q Consensus 3 ~~~~~~g~~~~~~~--~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 79 (281)
..|..++..+...+ +|++|+..++++++.+|.+..+|..|+.++.++| .+++++++++++++.+|.+..+|..+|.+
T Consensus 108 ~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~l 187 (567)
T 1dce_A 108 GTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 187 (567)
T ss_dssp HHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHH
Confidence 46888999999999 7799999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHh--------------hcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023550 80 CMKL--------------EEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 80 ~~~~--------------g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (281)
+..+ +.+++|++++.+++.++|++..+|..++.+...
T Consensus 188 l~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~ 238 (567)
T 1dce_A 188 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGR 238 (567)
T ss_dssp HHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSC
T ss_pred HHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhc
Confidence 9986 789999999999999999999999998887543
No 151
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.07 E-value=1.3e-09 Score=98.38 Aligned_cols=90 Identities=20% Similarity=0.194 Sum_probs=85.7
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..+...|..++..|+|++|+.+|++++..+|+++.+++++|.+|..+|+|++|+.+++++++++|.+..++..++.++..
T Consensus 274 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~ 353 (370)
T 1ihg_A 274 SCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQK 353 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHH
Q 023550 83 LEEYETAKVA 92 (281)
Q Consensus 83 ~g~~~~A~~~ 92 (281)
+++++++...
T Consensus 354 ~~~~~~a~k~ 363 (370)
T 1ihg_A 354 IKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999988654
No 152
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.07 E-value=5.6e-10 Score=88.43 Aligned_cols=85 Identities=18% Similarity=0.159 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-------cHH-----HHHHHHHHHHHhhcHHHHHHHHHHhhhc----
Q 023550 36 AELFADRAQASIKLQNFTEAVADANRAIELEPS-------MSK-----AYWRKATACMKLEEYETAKVALEKGASL---- 99 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~-------~~~-----a~~~~g~~~~~~g~~~~A~~~~~~a~~l---- 99 (281)
...+.++|..+.++|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|.+++++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 467889999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---CCCChhHH----HHHHHHHHHHHhh
Q 023550 100 ---APGDSRFT----NLIKECEERIAEE 120 (281)
Q Consensus 100 ---~p~~~~~~----~~l~~~~~~l~~~ 120 (281)
+|++..++ ..++.+...+++.
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~ 118 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRG 118 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCH
Confidence 99998888 8888887776665
No 153
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.06 E-value=2e-09 Score=94.65 Aligned_cols=117 Identities=8% Similarity=0.055 Sum_probs=107.9
Q ss_pred hHHHHHHHHH----HHh---cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHH--HHHHHHHHHHHcCCCcHHHH
Q 023550 3 TDLEKKAKEA----FID---DYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFT--EAVADANRAIELEPSMSKAY 73 (281)
Q Consensus 3 ~~~~~~g~~~----~~~---~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~--~A~~~~~~al~l~p~~~~a~ 73 (281)
..|..++..+ ... +++++++..+++++..+|.+..+|..|+.++..+|+++ ++++.+++++.++|.|..+|
T Consensus 104 ~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW 183 (306)
T 3dra_A 104 QIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAW 183 (306)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHH
Confidence 3566777777 555 78999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHhhc------HHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 74 WRKATACMKLEE------YETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 74 ~~~g~~~~~~g~------~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
..++.++..+++ +++++.++.+++..+|+|..+|..+..+...++.
T Consensus 184 ~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 184 SHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDR 235 (306)
T ss_dssp HHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCC
Confidence 999999999998 9999999999999999999999999988776654
No 154
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.06 E-value=4.9e-10 Score=86.23 Aligned_cols=100 Identities=16% Similarity=0.159 Sum_probs=87.2
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------ 69 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------ 69 (281)
+..+...|..++..|+|++|+..|.+++...+.. ..++..+|.++..+|++++|+..+++++.+.+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 4567889999999999999999999999885432 2578899999999999999999999999876542
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCC
Q 023550 70 SKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p 101 (281)
..+++.+|.++..+|++++|..++++++.+.+
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999988743
No 155
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.06 E-value=4.2e-10 Score=96.49 Aligned_cols=118 Identities=21% Similarity=0.244 Sum_probs=100.5
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC--------
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIELE-------- 66 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~--------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~-------- 66 (281)
..+...|..++..|+|++|+.+|.+++.. .+....++..+|.++..+|++++|+..+++++.+.
T Consensus 70 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 70 TMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 45778899999999999999999999987 35557889999999999999999999999999874
Q ss_pred CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc--------CCCChhHHHHHHHHHHHHHhh
Q 023550 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL--------APGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 67 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l--------~p~~~~~~~~l~~~~~~l~~~ 120 (281)
+....+++.+|.++..+|++++|+.+|++++.+ .|........++.+...+++.
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 211 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKF 211 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 667889999999999999999999999999988 444445566666666655544
No 156
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.05 E-value=1.1e-09 Score=78.64 Aligned_cols=69 Identities=17% Similarity=0.260 Sum_probs=66.2
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHH-HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHH
Q 023550 39 FADRAQASIKLQNFTEAVADANRAIELEPSMSK-AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (281)
Q Consensus 39 ~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~-a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~ 107 (281)
.+.+|.++...|+|++|+..+++++.++|.+.. +++.+|.+|+.+|++++|+.+|+++++++|++..++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 367899999999999999999999999999999 999999999999999999999999999999998877
No 157
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.05 E-value=7.7e-10 Score=95.71 Aligned_cols=115 Identities=16% Similarity=0.072 Sum_probs=93.8
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcH-----HHHHH--
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS-----KAYWR-- 75 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~-----~a~~~-- 75 (281)
..+...|..++..|+|++|+..|++++..+|++..+++++|.+|..+|++++|+..+++++.++|++. .++..
T Consensus 39 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~ 118 (281)
T 2c2l_A 39 VYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALR 118 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999988541 11111
Q ss_pred HH----------------------HHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023550 76 KA----------------------TACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 76 ~g----------------------~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (281)
++ ...+..|++++|+..|+++++++|++..+...+..+....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 182 (281)
T 2c2l_A 119 IAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEAKH 182 (281)
T ss_dssp HHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHTTTSGGGTTTSCHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhhhHHHHHHHHH
Confidence 11 1122478999999999999999998877666655544443
No 158
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.05 E-value=4.9e-10 Score=100.45 Aligned_cols=116 Identities=14% Similarity=0.159 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS-------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------ 69 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~-------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------ 69 (281)
..+...|..++..|+|++|+.+|.+++...+.. ..++.++|.+|..+|+|++|+..+++++.+.+..
T Consensus 144 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 223 (383)
T 3ulq_A 144 EFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLM 223 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHH
Confidence 345666777777777777777777777663222 3456667777777777777777777777654322
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhc-----C-CCChhHHHHHHHHHHHHH
Q 023550 70 SKAYWRKATACMKLEEYETAKVALEKGASL-----A-PGDSRFTNLIKECEERIA 118 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l-----~-p~~~~~~~~l~~~~~~l~ 118 (281)
..+++.+|.+|..+|++++|+.+|++++.+ + |........++.+...++
T Consensus 224 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 278 (383)
T 3ulq_A 224 GRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLG 278 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCC
Confidence 346667777777777777777777777662 3 433444444555444433
No 159
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.05 E-value=1.8e-09 Score=94.98 Aligned_cols=114 Identities=4% Similarity=-0.194 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHH----HHc---cCHHHHHHHHHHHHHcCCCcHHHH
Q 023550 3 TDLEKKAKEAFIDD--YFELAYDLYSQAIEISPNSAELFADRAQAS----IKL---QNFTEAVADANRAIELEPSMSKAY 73 (281)
Q Consensus 3 ~~~~~~g~~~~~~~--~y~~Al~~y~~al~~~p~~~~~~~~~a~~~----~~l---~~~~~A~~~~~~al~l~p~~~~a~ 73 (281)
..|..+|..+...+ ++++++..++.++..+|.+..+|..|+.++ ..+ +++++++..+++++.++|.+..+|
T Consensus 68 taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW 147 (306)
T 3dra_A 68 TIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVW 147 (306)
T ss_dssp HHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 35666777777777 777777777777777777777777777777 556 677777777777777777777777
Q ss_pred HHHHHHHHHhhcHH--HHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023550 74 WRKATACMKLEEYE--TAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 74 ~~~g~~~~~~g~~~--~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (281)
+.++.++..+|.++ +++.++.++++.+|.|..+|.....+...
T Consensus 148 ~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~ 192 (306)
T 3dra_A 148 SYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFS 192 (306)
T ss_dssp HHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 77777777777777 77777777777777777777666655443
No 160
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.04 E-value=1.4e-09 Score=79.00 Aligned_cols=83 Identities=18% Similarity=0.179 Sum_probs=71.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc--HHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATA 79 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~ 79 (281)
+..++..|..++..|+|++|+..|++++..+|+++.+|+++|.+|..+|++++|+..+++++.+.+.. ......+...
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~~ 86 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDA 86 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999999999999987643 4444445555
Q ss_pred HHHhh
Q 023550 80 CMKLE 84 (281)
Q Consensus 80 ~~~~g 84 (281)
+...+
T Consensus 87 l~~~~ 91 (100)
T 3ma5_A 87 KLKAE 91 (100)
T ss_dssp HHHHH
T ss_pred HHHcc
Confidence 44444
No 161
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.04 E-value=6.2e-10 Score=95.46 Aligned_cols=97 Identities=20% Similarity=0.208 Sum_probs=88.8
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------C
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEIS--------PNSAELFADRAQASIKLQNFTEAVADANRAIEL--------E 66 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~--------p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l--------~ 66 (281)
..+...|..++..|+|++|+.+|.+++... +....++..+|.++..+|++++|+..+++++.+ .
T Consensus 112 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 191 (311)
T 3nf1_A 112 ATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDD 191 (311)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTC
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 456788999999999999999999999874 555788999999999999999999999999998 7
Q ss_pred CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023550 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 67 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l 99 (281)
|....+++.+|.+|..+|++++|..+|++++.+
T Consensus 192 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 192 PNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 777889999999999999999999999999975
No 162
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.03 E-value=5.9e-10 Score=96.57 Aligned_cols=97 Identities=20% Similarity=0.234 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc-------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------H
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI-------SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~-------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~ 70 (281)
.+...|..++..|+|++|+.+|.+++.. .+....++.++|.+|.++|+|++|+..+++++.+.+.. +
T Consensus 157 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~ 236 (293)
T 3u3w_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIG 236 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 5788999999999999999999999953 12225688999999999999999999999999876433 8
Q ss_pred HHHHHHHHHHHHhh-cHHHHHHHHHHhhhcC
Q 023550 71 KAYWRKATACMKLE-EYETAKVALEKGASLA 100 (281)
Q Consensus 71 ~a~~~~g~~~~~~g-~~~~A~~~~~~a~~l~ 100 (281)
.+++.+|.+|..+| .+++|+.+|++++.+.
T Consensus 237 ~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 237 QLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 89999999999999 5799999999998753
No 163
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.03 E-value=8.5e-10 Score=89.08 Aligned_cols=98 Identities=15% Similarity=0.054 Sum_probs=84.7
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc---CC----Cc
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL---EP----SM 69 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l---~p----~~ 69 (281)
..+...|..++..|+|++|+.+|.+++.. .+....++.++|.++..+|++++|+..+.+++.+ .+ ..
T Consensus 27 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 106 (203)
T 3gw4_A 27 GARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAA 106 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHH
Confidence 45778899999999999999999999983 4445678899999999999999999999999988 33 34
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcC
Q 023550 70 SKAYWRKATACMKLEEYETAKVALEKGASLA 100 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~ 100 (281)
..+++.+|.++..+|++++|..++++++.+.
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 107 SANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 6678999999999999999999999998764
No 164
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.02 E-value=9.5e-10 Score=96.11 Aligned_cols=101 Identities=23% Similarity=0.247 Sum_probs=87.4
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------H
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~ 70 (281)
..+...|..+.. |+|++|+.+|.+++...+.. ..++.++|.+|..+|+|++|+..|++++.+.+.+ .
T Consensus 117 ~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 195 (307)
T 2ifu_A 117 MALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCY 195 (307)
T ss_dssp HHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHH
Confidence 456778888888 99999999999999986643 5788999999999999999999999999986543 4
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChh
Q 023550 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~ 105 (281)
.+++.+|.++..+|++++|+.+|++++ ++|....
T Consensus 196 ~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 196 KKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCC
Confidence 578889999999999999999999999 9987543
No 165
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.01 E-value=1.7e-09 Score=93.62 Aligned_cols=98 Identities=20% Similarity=0.242 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHH---hcCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC------c
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAI---EISPNSA----ELFADRAQASIKLQNFTEAVADANRAIELEPS------M 69 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al---~~~p~~~----~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~------~ 69 (281)
..+...|..++..|+|++|+.+|.+++ ...+++. .++.++|.+|..+|+|++|+..+++++.+.+. .
T Consensus 156 ~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~ 235 (293)
T 2qfc_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALI 235 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 356777888888888888888888888 4455542 57788888888888888888888888876532 2
Q ss_pred HHHHHHHHHHHHHhhcHHHH-HHHHHHhhhcC
Q 023550 70 SKAYWRKATACMKLEEYETA-KVALEKGASLA 100 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A-~~~~~~a~~l~ 100 (281)
+.+++.+|.+|..+|++++| ..+|++++.+.
T Consensus 236 ~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 236 GQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 67888888888888888888 77788877653
No 166
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.01 E-value=3.8e-09 Score=84.40 Aligned_cols=80 Identities=10% Similarity=0.002 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc--HHHHHHHHHHHHHhhcHHHHHHHHHHh
Q 023550 19 ELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATACMKLEEYETAKVALEKG 96 (281)
Q Consensus 19 ~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~g~~~~A~~~~~~a 96 (281)
.+|+..|.+++..+|+++.+++.+|.++..+|++++|+..++++++++|.. ..+++.+|.++..+|++++|..+|+++
T Consensus 91 ~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~a 170 (176)
T 2r5s_A 91 SPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQ 170 (176)
T ss_dssp CHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred chHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 346777788888899999999999999999999999999999999999975 669999999999999999999999988
Q ss_pred hh
Q 023550 97 AS 98 (281)
Q Consensus 97 ~~ 98 (281)
+.
T Consensus 171 l~ 172 (176)
T 2r5s_A 171 LY 172 (176)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 167
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.01 E-value=6.2e-09 Score=75.08 Aligned_cols=78 Identities=15% Similarity=0.030 Sum_probs=71.0
Q ss_pred CCCCHHHHHHHHHHHHHccC---HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHH
Q 023550 32 SPNSAELFADRAQASIKLQN---FTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (281)
Q Consensus 32 ~p~~~~~~~~~a~~~~~l~~---~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~ 108 (281)
+|++++++..+|.+++..++ ..+|...+++++.++|++..+++.+|..++..|+|++|+.+|+++++.+|.++....
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~~ 81 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRVT 81 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHH
Confidence 68999999999999987766 799999999999999999999999999999999999999999999999998554333
Q ss_pred H
Q 023550 109 L 109 (281)
Q Consensus 109 ~ 109 (281)
.
T Consensus 82 i 82 (93)
T 3bee_A 82 I 82 (93)
T ss_dssp H
T ss_pred H
Confidence 3
No 168
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.00 E-value=9.4e-09 Score=91.16 Aligned_cols=111 Identities=9% Similarity=-0.034 Sum_probs=97.0
Q ss_pred hHHHHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDD--YFELAYDLYSQAIEISPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATA 79 (281)
Q Consensus 3 ~~~~~~g~~~~~~~--~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~-~~~A~~~~~~al~l~p~~~~a~~~~g~~ 79 (281)
..|..++..+...+ +|++++.++++++..+|.|..+|..|+.+...+|. ++++++++.+++..+|.|..+|..++.+
T Consensus 109 ~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~l 188 (331)
T 3dss_A 109 GTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 188 (331)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 45777888888887 48999999999999999999999999999999998 6899999999999999999999999999
Q ss_pred HHHh--------------hcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023550 80 CMKL--------------EEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 80 ~~~~--------------g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (281)
+..+ +.+++++.++.+++..+|+|..+|..+.-+
T Consensus 189 l~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~l 236 (331)
T 3dss_A 189 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWL 236 (331)
T ss_dssp HHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9888 678999999999999999999888765444
No 169
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.00 E-value=5.7e-09 Score=76.72 Aligned_cols=82 Identities=23% Similarity=0.332 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
..++..|..++..|+|++|+..|.+++..+|.+...+..+|.++..+|++++|+..+++++.++|.+..++..+|.++..
T Consensus 44 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 44 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hh
Q 023550 83 LE 84 (281)
Q Consensus 83 ~g 84 (281)
.|
T Consensus 124 ~g 125 (125)
T 1na0_A 124 QG 125 (125)
T ss_dssp HC
T ss_pred cc
Confidence 65
No 170
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.00 E-value=3.2e-09 Score=91.97 Aligned_cols=103 Identities=17% Similarity=0.014 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHccCHHHHHHHHHHHHHcC--CC-cHHHHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS--AELFADRAQASIKLQNFTEAVADANRAIELE--PS-MSKAYWRKAT 78 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~--~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~--p~-~~~a~~~~g~ 78 (281)
..+..|..+++.++|++|+.+|++++...... ..+++++|.++..+|++++|+..|++++... |. ...+++++|.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gl 216 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAM 216 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHH
Confidence 45677888888888888888888776643111 3578888999999999999999999988544 54 6678899999
Q ss_pred HHHHhhcHHHHHHHHHHhhhcCCCChhHH
Q 023550 79 ACMKLEEYETAKVALEKGASLAPGDSRFT 107 (281)
Q Consensus 79 ~~~~~g~~~~A~~~~~~a~~l~p~~~~~~ 107 (281)
++.++|+.++|...|++++..+|+ ..+.
T Consensus 217 aL~~lGr~deA~~~l~~a~a~~P~-~~~~ 244 (282)
T 4f3v_A 217 ARRSQGNESAAVALLEWLQTTHPE-PKVA 244 (282)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCc-HHHH
Confidence 999999999999999999999987 5443
No 171
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.00 E-value=4.6e-09 Score=90.90 Aligned_cols=114 Identities=11% Similarity=0.018 Sum_probs=90.2
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHH---HcCCCc----HH
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAI---ELEPSM----SK 71 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al---~l~p~~----~~ 71 (281)
++..|..+...|+|++|+..|.+++...+.. ..++.++|.+|..+|+|++|+..+++++ ...+.+ ..
T Consensus 118 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~ 197 (293)
T 2qfc_A 118 QYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVK 197 (293)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHH
Confidence 3456777888899999999999999875443 5688999999999999999999999999 445543 26
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC------hhHHHHHHHHHHHHH
Q 023550 72 AYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKECEERIA 118 (281)
Q Consensus 72 a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~l~ 118 (281)
+++.+|.+|..+|+|++|+.+|++++.+.+.. ..+...++.+...++
T Consensus 198 ~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g 250 (293)
T 2qfc_A 198 VRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTT
T ss_pred HHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcC
Confidence 89999999999999999999999999875321 234455555554443
No 172
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.99 E-value=1.5e-08 Score=86.13 Aligned_cols=106 Identities=11% Similarity=0.082 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCCCcHHHHH
Q 023550 3 TDLEKKAKEAFI----DDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYW 74 (281)
Q Consensus 3 ~~~~~~g~~~~~----~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~----l~~~~~A~~~~~~al~l~p~~~~a~~ 74 (281)
..++..|..+.. .+++++|+.+|.++++.+ ++.++.++|.+|.. .+++++|+..+++++.++ +..+++
T Consensus 39 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~ 114 (273)
T 1ouv_A 39 SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCA 114 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHH
Confidence 345666777777 777777777777777664 66777777777777 777777777777777663 666777
Q ss_pred HHHHHHHH----hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023550 75 RKATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 75 ~~g~~~~~----~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (281)
.+|.+|.. .+++++|+.+|+++++.+ +......++.+.
T Consensus 115 ~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~ 156 (273)
T 1ouv_A 115 SLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLY 156 (273)
T ss_dssp HHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHH
Confidence 77777777 777777777777777665 334444444443
No 173
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.99 E-value=2.3e-09 Score=82.36 Aligned_cols=99 Identities=15% Similarity=0.193 Sum_probs=86.7
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC------CcH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEP------SMS 70 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p------~~~ 70 (281)
..+...|..++..|+|++|+.+|.+++...+.. ..++.++|.++..+|++++|+..+++++.+.+ ...
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 457788999999999999999999999875443 56789999999999999999999999998743 236
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCC
Q 023550 71 KAYWRKATACMKLEEYETAKVALEKGASLAP 101 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p 101 (281)
.+++.+|.++..+|++++|..++++++++..
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999987654
No 174
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.99 E-value=1.4e-08 Score=90.05 Aligned_cols=115 Identities=6% Similarity=-0.027 Sum_probs=105.1
Q ss_pred hHHHHHHHHHHHhcC----------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccC--HHHHHHHHHHHHHcCCCcH
Q 023550 3 TDLEKKAKEAFIDDY----------FELAYDLYSQAIEISPNSAELFADRAQASIKLQN--FTEAVADANRAIELEPSMS 70 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~----------y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~--~~~A~~~~~~al~l~p~~~ 70 (281)
..|..++..+...+. +++++..++.++..+|.+..+|..|+.++..+++ +++++..+++++.++|.+.
T Consensus 65 taWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy 144 (331)
T 3dss_A 65 TLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF 144 (331)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCH
Confidence 356677777766655 7999999999999999999999999999999994 9999999999999999999
Q ss_pred HHHHHHHHHHHHhhc-HHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023550 71 KAYWRKATACMKLEE-YETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~-~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (281)
.+|..++.++..+|. +++++.++.++++.+|.|..+|..+..+...+
T Consensus 145 ~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 145 HCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 999999999999999 69999999999999999999999988887665
No 175
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.98 E-value=9.7e-09 Score=93.90 Aligned_cols=114 Identities=19% Similarity=0.163 Sum_probs=83.0
Q ss_pred HHHHHHHHHHH--hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc--------------------------------
Q 023550 4 DLEKKAKEAFI--DDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-------------------------------- 49 (281)
Q Consensus 4 ~~~~~g~~~~~--~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l-------------------------------- 49 (281)
.+...|..+.. .++|++|+.+|.+++..+|+++.++..++.++..+
T Consensus 138 ~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~ 217 (472)
T 4g1t_A 138 LDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLAL 217 (472)
T ss_dssp HHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHH
Confidence 34455555544 45688888888888888888877777666664432
Q ss_pred ---------cCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023550 50 ---------QNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 50 ---------~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (281)
+++++|+..+++++.++|.+..+++.+|.+|...|++++|+..|+++++.+|++..+...++.+....
T Consensus 218 ~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~ 294 (472)
T 4g1t_A 218 KLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAK 294 (472)
T ss_dssp HHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHH
Confidence 34455666666666777777778888888999999999999999999999999888887777775443
No 176
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.98 E-value=1.2e-09 Score=94.60 Aligned_cols=112 Identities=11% Similarity=0.031 Sum_probs=91.7
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-------CCCcHHHH
Q 023550 7 KKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIEL-------EPSMSKAY 73 (281)
Q Consensus 7 ~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-------~p~~~~a~ 73 (281)
..|..++..++|++|+.+|.+++...+.. ..++.++|.+|..+|+|++|+..+++++.. .+....++
T Consensus 120 ~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 199 (293)
T 3u3w_A 120 YVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVR 199 (293)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHH
Confidence 47888888889999999999999864432 347899999999999999999999999952 23346689
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHhhhcCCCC------hhHHHHHHHHHHHHH
Q 023550 74 WRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKECEERIA 118 (281)
Q Consensus 74 ~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~l~ 118 (281)
+.+|.+|+.+|+|++|+.++++++.+.+.. ..+...++.+...++
T Consensus 200 ~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 200 YNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999876543 345666777666665
No 177
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.98 E-value=9.2e-10 Score=98.64 Aligned_cols=115 Identities=17% Similarity=0.155 Sum_probs=94.2
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc---CCC---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC-------CcHH
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEI---SPN---SAELFADRAQASIKLQNFTEAVADANRAIELEP-------SMSK 71 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~---~p~---~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p-------~~~~ 71 (281)
++..|..++..|+|++|+..|.+++.. .++ .+.++..+|.+|..+|++++|+..+.+|+.+.+ ....
T Consensus 106 ~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 185 (383)
T 3ulq_A 106 NFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQ 185 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHH
Confidence 344899999999999999999999987 233 468899999999999999999999999999843 3456
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh------hHHHHHHHHHHHHHh
Q 023550 72 AYWRKATACMKLEEYETAKVALEKGASLAPGDS------RFTNLIKECEERIAE 119 (281)
Q Consensus 72 a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~------~~~~~l~~~~~~l~~ 119 (281)
++..+|.+|..+|+|++|+.+|++++.+.+... .+...++.+...+++
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~ 239 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQ 239 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCC
Confidence 899999999999999999999999998865443 244455555544443
No 178
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=6.2e-09 Score=79.42 Aligned_cols=90 Identities=19% Similarity=0.249 Sum_probs=83.4
Q ss_pred cCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHH
Q 023550 31 ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM---SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (281)
Q Consensus 31 ~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~---~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~ 107 (281)
.++.+...+..+|.++...|+|++|+..+++++.++|++ ..+++.+|.+|+.+|+|++|+.+|++++.++|++..++
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 102 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKAL 102 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHH
Confidence 457789999999999999999999999999999999997 89999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhh
Q 023550 108 NLIKECEERIAEE 120 (281)
Q Consensus 108 ~~l~~~~~~l~~~ 120 (281)
..++.+...+++.
T Consensus 103 ~~~a~~~~~~~~~ 115 (148)
T 2dba_A 103 YRRSQALEKLGRL 115 (148)
T ss_dssp HHHHHHHHHHTCH
T ss_pred HHHHHHHHHcCCH
Confidence 8888887776654
No 179
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.95 E-value=5.9e-09 Score=75.93 Aligned_cols=86 Identities=17% Similarity=0.183 Sum_probs=79.4
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023550 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 35 ~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (281)
.+..+..+|.++...|++++|+..+++++.++|.+..+++.+|.++..+|++++|+.++++++..+|++..+...++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999998888888887
Q ss_pred HHHHhh
Q 023550 115 ERIAEE 120 (281)
Q Consensus 115 ~~l~~~ 120 (281)
..+++.
T Consensus 83 ~~~~~~ 88 (118)
T 1elw_A 83 EFLNRF 88 (118)
T ss_dssp HHTTCH
T ss_pred HHHhhH
Confidence 766554
No 180
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.94 E-value=1.1e-09 Score=95.62 Aligned_cols=101 Identities=11% Similarity=0.041 Sum_probs=87.7
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------H
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPN--S----AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~--~----~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~ 70 (281)
..+...|..+...|+|++|+.+|.+++.+.+. + ..++.++|.+|.. |++++|+..|++++.+.+.. .
T Consensus 77 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~ 155 (307)
T 2ifu_A 77 KAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAA 155 (307)
T ss_dssp HHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHH
Confidence 45677899999999999999999999988432 2 4678899999999 99999999999999987643 6
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh
Q 023550 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~ 104 (281)
.++..+|.+|..+|+|++|+.+|++++.+.+.+.
T Consensus 156 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 156 ELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 7899999999999999999999999999876543
No 181
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.94 E-value=2.9e-09 Score=94.76 Aligned_cols=118 Identities=13% Similarity=0.143 Sum_probs=94.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------H
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~ 70 (281)
..+...|..++..|+|++|+.+|.+++...+.. ..++..+|.++..+|++++|+..+++++.+.+.. .
T Consensus 228 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 307 (406)
T 3sf4_A 228 RAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEG 307 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 357788999999999999999999998876655 6788899999999999999999999999875543 6
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC------hhHHHHHHHHHHHHHhh
Q 023550 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKECEERIAEE 120 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~l~~~ 120 (281)
.++..+|.+|..+|++++|+.+|++++++.+.. ......++.+...++..
T Consensus 308 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 363 (406)
T 3sf4_A 308 RACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLS 363 (406)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhhHh
Confidence 788899999999999999999999998874332 33455566666666554
No 182
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.94 E-value=4.9e-09 Score=90.86 Aligned_cols=89 Identities=10% Similarity=-0.018 Sum_probs=77.9
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc--HHHHHHHHHHHHHhhcHH
Q 023550 10 KEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATACMKLEEYE 87 (281)
Q Consensus 10 ~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~g~~~ 87 (281)
..+...+++++|+..|.+++..+|++..+++++|.++...|++++|+..+.++++++|++ ..++..+|.++..+|+.+
T Consensus 193 ~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 272 (287)
T 3qou_A 193 IELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGD 272 (287)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTC
T ss_pred HHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCC
Confidence 334444445555666777788899999999999999999999999999999999999998 899999999999999999
Q ss_pred HHHHHHHHhhh
Q 023550 88 TAKVALEKGAS 98 (281)
Q Consensus 88 ~A~~~~~~a~~ 98 (281)
+|...|++++.
T Consensus 273 ~a~~~~r~al~ 283 (287)
T 3qou_A 273 ALASXYRRQLY 283 (287)
T ss_dssp HHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 99999998864
No 183
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.94 E-value=1.1e-08 Score=91.26 Aligned_cols=109 Identities=5% Similarity=-0.105 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc-c-CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 5 LEKKAKEAFIDD-YFELAYDLYSQAIEISPNSAELFADRAQASIKL-Q-NFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 5 ~~~~g~~~~~~~-~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l-~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
|..++..+...+ ++++++..+++++..+|.+..+|..|+.++..+ + +++++++.+++++.++|.+..+|..++.++.
T Consensus 91 Wn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~ 170 (349)
T 3q7a_A 91 WQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYS 170 (349)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 444444444444 355555555555555555555555555555554 4 4555555555555555555555555555555
Q ss_pred HhhcHH--------HHHHHHHHhhhcCCCChhHHHHHHHH
Q 023550 82 KLEEYE--------TAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 82 ~~g~~~--------~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (281)
.+|.++ +++.++.++++.+|.|..+|.....+
T Consensus 171 ~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~l 210 (349)
T 3q7a_A 171 HFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYL 210 (349)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 555444 55555555555555555444444443
No 184
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.93 E-value=1e-08 Score=91.85 Aligned_cols=101 Identities=16% Similarity=0.043 Sum_probs=90.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC---C---CHHHHHHHHHHHHHccCHHHHHHHHHHHHH-----cCCCcH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISP---N---SAELFADRAQASIKLQNFTEAVADANRAIE-----LEPSMS 70 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p---~---~~~~~~~~a~~~~~l~~~~~A~~~~~~al~-----l~p~~~ 70 (281)
+..+...|..+...|+|++|+.+|.+++...+ + ...++.++|.+|..+|++++|+..+++++. .+|...
T Consensus 182 ~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 261 (378)
T 3q15_A 182 IQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLP 261 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHH
Confidence 34567899999999999999999999998632 1 246788999999999999999999999999 778889
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCC
Q 023550 71 KAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~ 102 (281)
.+++.+|.+++.+|++++|..++++++.+.+.
T Consensus 262 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 262 KVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998654
No 185
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.93 E-value=2.4e-08 Score=89.05 Aligned_cols=110 Identities=7% Similarity=0.015 Sum_probs=99.4
Q ss_pred HHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh-h-cH
Q 023550 11 EAFIDD-YFELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATACMKL-E-EY 86 (281)
Q Consensus 11 ~~~~~~-~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~-g-~~ 86 (281)
.....+ ..++|+.+++++|..+|++..+|..|+.++..++ .+++++..++.++..+|.+..+|..++.++..+ + ++
T Consensus 62 ~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~ 141 (349)
T 3q7a_A 62 AIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDP 141 (349)
T ss_dssp HHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCC
T ss_pred HHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCCh
Confidence 334444 4478999999999999999999999999999999 599999999999999999999999999999999 8 99
Q ss_pred HHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 87 ETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 87 ~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
++++.++.++++.+|.|..+|...+.+...++..
T Consensus 142 ~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~ 175 (349)
T 3q7a_A 142 VSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTL 175 (349)
T ss_dssp HHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccc
Confidence 9999999999999999999998888877766543
No 186
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.93 E-value=4.2e-09 Score=83.26 Aligned_cols=69 Identities=20% Similarity=0.205 Sum_probs=63.6
Q ss_pred hhHHHHHHHHHHHhcCH----------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc-----------CHHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYF----------ELAYDLYSQAIEISPNSAELFADRAQASIKLQ-----------NFTEAVADAN 60 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y----------~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~-----------~~~~A~~~~~ 60 (281)
++.++..|.++...+++ ++|+..|+++|+++|++..+|+++|.+|..+| +|++|+.+|+
T Consensus 36 aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~ 115 (158)
T 1zu2_A 36 ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQ 115 (158)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHH
Confidence 46788899999988775 59999999999999999999999999999985 8999999999
Q ss_pred HHHHcCCCcH
Q 023550 61 RAIELEPSMS 70 (281)
Q Consensus 61 ~al~l~p~~~ 70 (281)
+|+.++|++.
T Consensus 116 kAl~l~P~~~ 125 (158)
T 1zu2_A 116 QAVDEQPDNT 125 (158)
T ss_dssp HHHHHCTTCH
T ss_pred HHHHhCCCCH
Confidence 9999999985
No 187
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.92 E-value=1.1e-08 Score=75.61 Aligned_cols=83 Identities=10% Similarity=-0.031 Sum_probs=71.5
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc--HHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATAC 80 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~ 80 (281)
..++..|..++..|+|++|+..|.+++..+|++..+++.+|.+|..+|++++|+..+++++.++|.. ..+...+...+
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l 99 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVFL 99 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence 4678899999999999999999999999999999999999999999999999999999999998753 44445555555
Q ss_pred HHhhc
Q 023550 81 MKLEE 85 (281)
Q Consensus 81 ~~~g~ 85 (281)
..+++
T Consensus 100 ~~l~~ 104 (115)
T 2kat_A 100 RRLAR 104 (115)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 55444
No 188
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.92 E-value=4.6e-09 Score=94.03 Aligned_cols=119 Identities=13% Similarity=0.029 Sum_probs=94.3
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC------C
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN-------SAELFADRAQASIKLQNFTEAVADANRAIELEP------S 68 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~-------~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p------~ 68 (281)
+..+...|..++..|+++.|+.+|.+++...+. ...++.++|.+|..+|+|++|+..+.+++.+.+ .
T Consensus 141 a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 220 (378)
T 3q15_A 141 AEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRF 220 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 345677888999999999999999999886432 245778899999999999999999999998643 2
Q ss_pred cHHHHHHHHHHHHHhhcHHHHHHHHHHhhh-----cCCCChhHHHHHHHHHHHHHhh
Q 023550 69 MSKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 69 ~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~-----l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
...+++.+|.+|..+|++++|+.+|++++. .+|........++.+...+++.
T Consensus 221 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~ 277 (378)
T 3q15_A 221 IAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQT 277 (378)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCH
Confidence 356888899999999999999999999998 6666655666677776655544
No 189
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.91 E-value=1.7e-08 Score=75.51 Aligned_cols=82 Identities=13% Similarity=0.022 Sum_probs=72.9
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA 79 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 79 (281)
..++..|..++..|+|++|+..|.+++..+|++ +.+++.+|.++..+|++++|+..+++++...|++..+...+..+
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l 119 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERL 119 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHH
Confidence 467889999999999999999999999999999 89999999999999999999999999999999998776666555
Q ss_pred HHHhh
Q 023550 80 CMKLE 84 (281)
Q Consensus 80 ~~~~g 84 (281)
....+
T Consensus 120 ~~l~~ 124 (129)
T 2xev_A 120 QSIRL 124 (129)
T ss_dssp HHHC-
T ss_pred HHHHh
Confidence 44333
No 190
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.90 E-value=1.2e-08 Score=84.37 Aligned_cols=94 Identities=16% Similarity=0.068 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc----CHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ----NFTEAVADANRAIELEPSMSKAYWRKAT 78 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~----~~~~A~~~~~~al~l~p~~~~a~~~~g~ 78 (281)
..++..|..++..+++++|+.+|.++++. .++.+++++|.+|.. + ++++|+.+|++++. +.++.+++.+|.
T Consensus 19 ~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~ 93 (212)
T 3rjv_A 19 RAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLAR 93 (212)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHH
Confidence 34555566666666666666666665553 345555555555554 4 55555555555533 234445555555
Q ss_pred HHHH----hhcHHHHHHHHHHhhhcCC
Q 023550 79 ACMK----LEEYETAKVALEKGASLAP 101 (281)
Q Consensus 79 ~~~~----~g~~~~A~~~~~~a~~l~p 101 (281)
+|.. .+++++|+.+|+++.+..+
T Consensus 94 ~y~~g~g~~~d~~~A~~~~~~A~~~~~ 120 (212)
T 3rjv_A 94 VLVNRQAGATDVAHAITLLQDAARDSE 120 (212)
T ss_dssp HHTCGGGSSCCHHHHHHHHHHHTSSTT
T ss_pred HHHcCCCCccCHHHHHHHHHHHHHcCC
Confidence 5544 4455555555555555444
No 191
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.89 E-value=1.1e-08 Score=84.56 Aligned_cols=109 Identities=14% Similarity=-0.005 Sum_probs=97.4
Q ss_pred hHHHHHHHHHHHhc----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCC--CcHHH
Q 023550 3 TDLEKKAKEAFIDD----YFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEP--SMSKA 72 (281)
Q Consensus 3 ~~~~~~g~~~~~~~----~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~----l~~~~~A~~~~~~al~l~p--~~~~a 72 (281)
..++..|..+.. + ++++|+.+|.++++ +.++.+++++|.+|.. .+++.+|+.++++++..++ .++.+
T Consensus 51 ~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a 127 (212)
T 3rjv_A 51 DALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDA 127 (212)
T ss_dssp HHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHH
Confidence 467788888887 7 99999999999976 4689999999999998 8899999999999999998 45999
Q ss_pred HHHHHHHHHH----hhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHH
Q 023550 73 YWRKATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 73 ~~~~g~~~~~----~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (281)
++.+|.+|.. .+++++|+.+|+++.++ +.+......++.+..
T Consensus 128 ~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~ 173 (212)
T 3rjv_A 128 QMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQ 173 (212)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 9999999999 88999999999999999 777777777777764
No 192
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.86 E-value=3.1e-09 Score=91.42 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=94.6
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------H
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~ 70 (281)
..+...|..++..|+|++|+..|.+++...+.. ..++..+|.++..+|++++|+..+++++.+.+.. .
T Consensus 184 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 263 (338)
T 3ro2_A 184 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEA 263 (338)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 356778999999999999999999999875432 3488999999999999999999999999887654 7
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh------hHHHHHHHHHHHHHh
Q 023550 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGDS------RFTNLIKECEERIAE 119 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~------~~~~~l~~~~~~l~~ 119 (281)
.+++.+|.++..+|++++|..+|++++.+.+... .....++.+...+++
T Consensus 264 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 318 (338)
T 3ro2_A 264 QSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGN 318 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCC
Confidence 7899999999999999999999999988765432 234455555555444
No 193
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.85 E-value=3.1e-08 Score=72.60 Aligned_cols=76 Identities=16% Similarity=0.130 Sum_probs=51.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEIS-------PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYW 74 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~~-------p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~ 74 (281)
+...+..|..++..++|..|+.+|.+|++.. .....++.++|.|+.++|+++.|+..+++++.++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 4566777888888888888888888887752 233566666666666666666666666666666666666555
Q ss_pred HHH
Q 023550 75 RKA 77 (281)
Q Consensus 75 ~~g 77 (281)
+++
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 554
No 194
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.84 E-value=4.1e-09 Score=94.54 Aligned_cols=98 Identities=12% Similarity=0.097 Sum_probs=82.0
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc------CCCcH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL------EPSMS 70 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l------~p~~~ 70 (281)
..+...|..++..|+|++|+.+|.+++.. .+....++..+|.+|..+|++++|+..+++++.+ .+...
T Consensus 87 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 166 (411)
T 4a1s_A 87 AIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEG 166 (411)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHH
Confidence 45778888899999999999999998887 4556788888999999999999999999988887 55667
Q ss_pred HHHHHHHHHHHHhhc-----------------HHHHHHHHHHhhhcC
Q 023550 71 KAYWRKATACMKLEE-----------------YETAKVALEKGASLA 100 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~-----------------~~~A~~~~~~a~~l~ 100 (281)
.+++.+|.+|..+|+ +++|+.+|++++.+.
T Consensus 167 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~ 213 (411)
T 4a1s_A 167 RALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLM 213 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 788888999999998 888888888887754
No 195
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.83 E-value=3.4e-08 Score=92.30 Aligned_cols=116 Identities=16% Similarity=0.143 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----CC---
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EP--- 67 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~-----~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-----~p--- 67 (281)
.....+..+..+|+|++|+.+|.++|.. .+++ ...+.++|.+|..+|+|++|+..+++++.+ ++
T Consensus 311 ~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 390 (490)
T 3n71_A 311 DTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNA 390 (490)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 4456677788999999999999999986 4444 567889999999999999999999999975 33
Q ss_pred CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhh-----cCCCChhHH---HHHHHHHHHHHh
Q 023550 68 SMSKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFT---NLIKECEERIAE 119 (281)
Q Consensus 68 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~-----l~p~~~~~~---~~l~~~~~~l~~ 119 (281)
+-+..+.++|.+|..+|+|++|...|++++. +.|+++.+. ..+..++..++.
T Consensus 391 ~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~ 450 (490)
T 3n71_A 391 QLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRM 450 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHH
Confidence 4577899999999999999999999999987 467777654 445555544443
No 196
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.82 E-value=1.2e-08 Score=88.32 Aligned_cols=115 Identities=10% Similarity=0.016 Sum_probs=97.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc--HHHHHHHHHHHHH
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATACMK 82 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~ 82 (281)
....|..+...|+|++|.+.|..++...|.+. .++.+|.++++.++|++|+..++.++...+.. ..+++.+|.++..
T Consensus 105 ~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~ 183 (282)
T 4f3v_A 105 TMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN 183 (282)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH
Confidence 35578889999999999999999999999888 99999999999999999999999887764222 4589999999999
Q ss_pred hhcHHHHHHHHHHhhhcC--CC-ChhHHHHHHHHHHHHHhh
Q 023550 83 LEEYETAKVALEKGASLA--PG-DSRFTNLIKECEERIAEE 120 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~--p~-~~~~~~~l~~~~~~l~~~ 120 (281)
+|++++|+.+|+++.... |. .......++.|...+++.
T Consensus 184 LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~ 224 (282)
T 4f3v_A 184 LALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNE 224 (282)
T ss_dssp TTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCH
T ss_pred CCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCH
Confidence 999999999999998544 44 345677777777777666
No 197
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.81 E-value=1.3e-08 Score=81.97 Aligned_cols=117 Identities=9% Similarity=0.095 Sum_probs=92.8
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc---CCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC------c
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI---SPNS----AELFADRAQASIKLQNFTEAVADANRAIELEPS------M 69 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~---~p~~----~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~------~ 69 (281)
..+...|..+...|+|++|+.+|.+++.. .+++ ..++.++|.++..+|++++|+..+++++.+.+. .
T Consensus 67 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 146 (203)
T 3gw4_A 67 RALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAI 146 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHH
Confidence 45778899999999999999999999998 4433 467889999999999999999999999976432 2
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
..++..+|.++..+|++++|..+|++++++..... -..+...+...+...
T Consensus 147 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~~~~ 196 (203)
T 3gw4_A 147 ACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELE-DSEAVNELMTRLNGL 196 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC-CHHHHHHHHhcccch
Confidence 44678999999999999999999999998754332 223444554444443
No 198
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.81 E-value=3e-08 Score=92.90 Aligned_cols=114 Identities=10% Similarity=-0.016 Sum_probs=91.0
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHH-H
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA-ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-C 80 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~-~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~ 80 (281)
..++..|..+...|++++|...|.+++...|.++ .+|..++.++.+.|++++|+..|++|++..|.....++..+.. +
T Consensus 322 ~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~ 401 (530)
T 2ooe_A 322 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 401 (530)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 3567778888888999999999999999888885 5888888888888888888888888888888777777766655 3
Q ss_pred HHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023550 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (281)
...|++++|...|+++++.+|++..++..+..+...
T Consensus 402 ~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~ 437 (530)
T 2ooe_A 402 YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 437 (530)
T ss_dssp HHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHh
Confidence 457888888888888888888887776666655443
No 199
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.81 E-value=1.1e-08 Score=75.83 Aligned_cols=85 Identities=15% Similarity=0.171 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC-------hhHH
Q 023550 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD-------SRFT 107 (281)
Q Consensus 35 ~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~-------~~~~ 107 (281)
.+..+..+|.++...|++++|+..+.+++.++|.+..+++.+|.++..+|++++|+.+|++++.+.|.+ ..+.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 457789999999999999999999999999999999999999999999999999999999999998876 5556
Q ss_pred HHHHHHHHHHHh
Q 023550 108 NLIKECEERIAE 119 (281)
Q Consensus 108 ~~l~~~~~~l~~ 119 (281)
..++.+...+++
T Consensus 83 ~~la~~~~~~~~ 94 (131)
T 1elr_A 83 ARIGNSYFKEEK 94 (131)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHhcc
Confidence 666666555444
No 200
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.79 E-value=2.8e-08 Score=91.38 Aligned_cols=107 Identities=11% Similarity=0.143 Sum_probs=87.7
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----C---CCc
Q 023550 6 EKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----E---PSM 69 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~-----~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-----~---p~~ 69 (281)
+..+......|+|++|+.+|.++|.. .|++ ...+.++|.+|..+|+|++|+..+++++.+ + |+-
T Consensus 302 le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 302 IEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 34455555678999999999999985 5555 466889999999999999999999999975 3 445
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhc-----CCCChhHHHHHHH
Q 023550 70 SKAYWRKATACMKLEEYETAKVALEKGASL-----APGDSRFTNLIKE 112 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l-----~p~~~~~~~~l~~ 112 (281)
+..+.++|.+|..+|+|++|...|++|+.+ .|+++.+......
T Consensus 382 a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~ 429 (433)
T 3qww_A 382 ASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQE 429 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 778999999999999999999999999874 6777766554443
No 201
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.79 E-value=1e-07 Score=72.04 Aligned_cols=106 Identities=9% Similarity=0.035 Sum_probs=93.3
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHH---HHHHHHHHHHcC-C-CcHHHHHHHHHHHHHhhcHHH
Q 023550 14 IDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTE---AVADANRAIELE-P-SMSKAYWRKATACMKLEEYET 88 (281)
Q Consensus 14 ~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~---A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~g~~~~ 88 (281)
.......+.+.|.+.+..++.+....+++|+++++..+... ++..+...++.+ | ...+++|.+|.+++++|+|.+
T Consensus 13 ~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~ 92 (126)
T 1nzn_A 13 SVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 92 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHH
Confidence 44456677888888888888899999999999999987666 999999998887 5 578899999999999999999
Q ss_pred HHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 89 AKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 89 A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
|+.++..+++.+|+|..+......+..++..
T Consensus 93 A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~k 123 (126)
T 1nzn_A 93 ALKYVRGLLQTEPQNNQAKELERLIDKAMKK 123 (126)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999888888877654
No 202
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.78 E-value=1.1e-07 Score=88.93 Aligned_cols=106 Identities=13% Similarity=0.082 Sum_probs=95.0
Q ss_pred hHHHHHHHHHHH-------hcCHH-------HHHHHHHHHHh-cCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC
Q 023550 3 TDLEKKAKEAFI-------DDYFE-------LAYDLYSQAIE-ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP 67 (281)
Q Consensus 3 ~~~~~~g~~~~~-------~~~y~-------~Al~~y~~al~-~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p 67 (281)
..|+..|..+.. .|+++ +|+..|.+++. ..|++..+|..+|.++..+|++++|...|++++.+.|
T Consensus 273 ~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p 352 (530)
T 2ooe_A 273 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIED 352 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccc
Confidence 456777777775 68887 99999999997 7999999999999999999999999999999999999
Q ss_pred CcH-HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHH
Q 023550 68 SMS-KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (281)
Q Consensus 68 ~~~-~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~ 108 (281)
.+. .+|..+|..+.+.|++++|+..|+++++..|.+.....
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~ 394 (530)
T 2ooe_A 353 IDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYV 394 (530)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHH
T ss_pred cCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHH
Confidence 985 69999999999999999999999999999887655433
No 203
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.78 E-value=1.2e-07 Score=69.43 Aligned_cols=86 Identities=15% Similarity=0.060 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC-------CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHH
Q 023550 35 SAELFADRAQASIKLQNFTEAVADANRAIELE-------PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (281)
Q Consensus 35 ~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~-------p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~ 107 (281)
++.-.+.+|..++..++|..|+.+++.|+++. .....++..+|.+++++|+++.|+..++++++++|++..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 35567899999999999999999999999863 45688999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHhh
Q 023550 108 NLIKECEERIAEE 120 (281)
Q Consensus 108 ~~l~~~~~~l~~~ 120 (281)
..+...+..+...
T Consensus 84 ~n~~~~~~~~~~~ 96 (104)
T 2v5f_A 84 GNLKYFEYIMAKE 96 (104)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhc
Confidence 7777666655543
No 204
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.72 E-value=1.4e-07 Score=86.72 Aligned_cols=108 Identities=17% Similarity=0.121 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----C---C
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----E---P 67 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~-----~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-----~---p 67 (281)
.+......+..+|+|++|+..|.+++.. .+++ ...+.++|.+|..+|+|++|+..+++++.+ + |
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp 368 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHP 368 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCCh
Confidence 4455566788899999999999999976 4455 467889999999999999999999999964 3 3
Q ss_pred CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc-----CCCChhHHHHHH
Q 023550 68 SMSKAYWRKATACMKLEEYETAKVALEKGASL-----APGDSRFTNLIK 111 (281)
Q Consensus 68 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l-----~p~~~~~~~~l~ 111 (281)
.-+..++++|.+|..+|+|++|+..|++|+++ .|+++.+...+.
T Consensus 369 ~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~ 417 (429)
T 3qwp_A 369 VRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLIL 417 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Confidence 45778999999999999999999999999874 777777655433
No 205
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.64 E-value=6.5e-07 Score=80.03 Aligned_cols=101 Identities=19% Similarity=0.134 Sum_probs=80.0
Q ss_pred hHHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHH---------------------------------
Q 023550 3 TDLEKKAKEAFIDD---YFELAYDLYSQAIEISPNSAELFADRAQAS--------------------------------- 46 (281)
Q Consensus 3 ~~~~~~g~~~~~~~---~y~~Al~~y~~al~~~p~~~~~~~~~a~~~--------------------------------- 46 (281)
-.++.+|..++..+ ++.+|+.+|++|++++|+++.++..++.||
T Consensus 197 ydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~ 276 (372)
T 3ly7_A 197 LTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNL 276 (372)
T ss_dssp HHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcC
Confidence 35677888887654 468999999999999999987777555544
Q ss_pred -----------HHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh
Q 023550 47 -----------IKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 47 -----------~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~ 104 (281)
...|++++|+..+++|+.++|+ ..+|..+|.++...|++++|...|.+|++++|..+
T Consensus 277 a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 277 SIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 2347888888888888888864 56778888888888888888888888888888765
No 206
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.63 E-value=4.2e-07 Score=69.96 Aligned_cols=89 Identities=13% Similarity=0.019 Sum_probs=78.6
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-
Q 023550 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWRKATACMK- 82 (281)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~----l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~- 82 (281)
.|..+...+.+++|+.+|.++.+. .++.+++++|.+|.. .+++++|+.+|+++.+. .++.+++.+|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G 106 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAG 106 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCC
Confidence 677777778888899999999887 678899999999998 78999999999999887 578899999999999
Q ss_pred ---hhcHHHHHHHHHHhhhcC
Q 023550 83 ---LEEYETAKVALEKGASLA 100 (281)
Q Consensus 83 ---~g~~~~A~~~~~~a~~l~ 100 (281)
.+++++|+.+|+++.+..
T Consensus 107 ~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 107 KGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp SSSCCCHHHHHHHHHHHHHTT
T ss_pred CCCCcCHHHHHHHHHHHHHCC
Confidence 899999999999998875
No 207
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.62 E-value=1.9e-07 Score=82.83 Aligned_cols=98 Identities=9% Similarity=0.047 Sum_probs=58.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcC--------CCcH
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELE--------PSMS 70 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~--------p~~~ 70 (281)
+...|..++..|+|++|+..|.+++...+.. ...+.++|.++...|++++|+..+++++.+. |...
T Consensus 56 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~ 135 (373)
T 1hz4_A 56 TSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHE 135 (373)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHH
Confidence 4455666666666666666666666553322 1234556666666666666666666666543 2234
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCC
Q 023550 71 KAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~ 102 (281)
.++..+|.+++..|++++|..++++++.+.+.
T Consensus 136 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 136 FLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 45556666666666666666666666665543
No 208
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.55 E-value=4.6e-07 Score=83.89 Aligned_cols=106 Identities=11% Similarity=-0.010 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCCCcHHHHHHH
Q 023550 4 DLEKKAKEAFIDD---YFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWRK 76 (281)
Q Consensus 4 ~~~~~g~~~~~~~---~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~----l~~~~~A~~~~~~al~l~p~~~~a~~~~ 76 (281)
.++..|..++..| ++++|+.+|.++++. .++.+++++|.+|.. .+++++|+.+|+++++.+ ++.+++.+
T Consensus 330 a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~L 405 (490)
T 2xm6_A 330 AQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQL 405 (490)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHH
Confidence 4566677776644 778888888888776 567788888888887 788888888888888764 57788888
Q ss_pred HHHHHH----hhcHHHHHHHHHHhhhcCCC---ChhHHHHHHHH
Q 023550 77 ATACMK----LEEYETAKVALEKGASLAPG---DSRFTNLIKEC 113 (281)
Q Consensus 77 g~~~~~----~g~~~~A~~~~~~a~~l~p~---~~~~~~~l~~~ 113 (281)
|.+|.. .+++++|..+|+++++.+|+ +.....++..+
T Consensus 406 g~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~l~~~ 449 (490)
T 2xm6_A 406 GEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKKL 449 (490)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHTTS
T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHHHHHHHhc
Confidence 888887 78888888888888888744 55554444433
No 209
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.54 E-value=5.3e-07 Score=79.92 Aligned_cols=97 Identities=20% Similarity=0.226 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-----cH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEIS--------PNSAELFADRAQASIKLQNFTEAVADANRAIELEPS-----MS 70 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~--------p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~-----~~ 70 (281)
.+...|..++..|+|++|+.+|.+++... |....++.++|.++...|++++|+..+++++.+.+. ..
T Consensus 95 ~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 174 (373)
T 1hz4_A 95 SLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQL 174 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHH
Confidence 35678999999999999999999999874 334567888999999999999999999999998764 35
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhhhcC
Q 023550 71 KAYWRKATACMKLEEYETAKVALEKGASLA 100 (281)
Q Consensus 71 ~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~ 100 (281)
.+++.+|.++...|++++|..++++++.+.
T Consensus 175 ~~~~~la~~~~~~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 175 QCLAMLIQCSLARGDLDNARSQLNRLENLL 204 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 688899999999999999999999998874
No 210
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.49 E-value=2.7e-07 Score=86.15 Aligned_cols=99 Identities=11% Similarity=0.014 Sum_probs=84.7
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----CCC
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~-----~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-----~p~ 68 (281)
+..+.+.|..|..+|+|++|+.+|.++|.. .+++ ...+.++|.+|..+|+|++|+..+++|+.+ +|+
T Consensus 351 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~ 430 (490)
T 3n71_A 351 LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPS 430 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 456788999999999999999999999976 4444 567889999999999999999999999974 455
Q ss_pred c---HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcC
Q 023550 69 M---SKAYWRKATACMKLEEYETAKVALEKGASLA 100 (281)
Q Consensus 69 ~---~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~ 100 (281)
. .+..-.++.++..++.|++|...|+++.+..
T Consensus 431 Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 431 HPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 5566789999999999999999998886544
No 211
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.49 E-value=3.2e-06 Score=78.17 Aligned_cols=104 Identities=11% Similarity=-0.013 Sum_probs=64.1
Q ss_pred HHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCCCcHHHHHH
Q 023550 4 DLEKKAKEAFI----DDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWR 75 (281)
Q Consensus 4 ~~~~~g~~~~~----~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~----l~~~~~A~~~~~~al~l~p~~~~a~~~ 75 (281)
.++..|..++. .+++++|+.+|.++++. .++.+++.+|.+|.. .+++++|+.+|++++.. .++.+++.
T Consensus 41 a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~ 116 (490)
T 2xm6_A 41 AQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--GLPQAQQN 116 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHH
Confidence 45556666666 66666777777666654 456666666666666 66666666666666654 35566666
Q ss_pred HHHHHHH----hhcHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023550 76 KATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 76 ~g~~~~~----~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (281)
+|.+|.. .+++++|+.+|+++...+ +......++.+
T Consensus 117 Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~--~~~a~~~Lg~~ 156 (490)
T 2xm6_A 117 LGVMYHEGNGVKVDKAESVKWFRLAAEQG--RDSGQQSMGDA 156 (490)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHH
Confidence 6666666 566666666666665542 34444444444
No 212
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.48 E-value=1.5e-06 Score=80.04 Aligned_cols=106 Identities=12% Similarity=0.009 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc----cCHHHHHHHHHHHHHcCCCcHHHHHHH
Q 023550 4 DLEKKAKEAFIDD---YFELAYDLYSQAIEISPNSAELFADRAQASIKL----QNFTEAVADANRAIELEPSMSKAYWRK 76 (281)
Q Consensus 4 ~~~~~g~~~~~~~---~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l----~~~~~A~~~~~~al~l~p~~~~a~~~~ 76 (281)
.++..|..+...| ++++|+.+|.++....+.+...++++|.+|... +++++|+.+|+++. |.++.+++.+
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~L 254 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSL 254 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHH
Confidence 3456666666666 777777777777777777666666677766554 56677777777666 6666666666
Q ss_pred HHH-H--HHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHH
Q 023550 77 ATA-C--MKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (281)
Q Consensus 77 g~~-~--~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (281)
|.+ + ...+++++|+.+|+++.+.+ +......++.+.
T Consensus 255 g~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y 293 (452)
T 3e4b_A 255 AQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLY 293 (452)
T ss_dssp HHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHH
Confidence 666 3 34566666666666665443 444555555444
No 213
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.46 E-value=9.6e-07 Score=63.42 Aligned_cols=68 Identities=19% Similarity=0.146 Sum_probs=62.7
Q ss_pred hhHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc
Q 023550 2 ATDLEKKAKEAFIDDY---FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM 69 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~---y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~ 69 (281)
++.+...|..++..++ .++|..++.+++..+|+++.+++.+|..++..|+|.+|+..+++++..+|.+
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 4567888999986666 7999999999999999999999999999999999999999999999999884
No 214
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.41 E-value=3.2e-06 Score=74.04 Aligned_cols=99 Identities=10% Similarity=-0.009 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC------cHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISP--NSAELFADRAQASIKLQNFTEAVADANRAIELEPS------MSKAYWR 75 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p--~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~------~~~a~~~ 75 (281)
.++..|..+...|++++|++++.+.+..+| .+.+++...+.+++++|+.+.|...+++..+.+|+ ....++.
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~La 181 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLA 181 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHH
Confidence 356789999999999999999999999987 88999999999999999999999999999999993 3333333
Q ss_pred HHHHHHHhh--cHHHHHHHHHHhhhcCCC
Q 023550 76 KATACMKLE--EYETAKVALEKGASLAPG 102 (281)
Q Consensus 76 ~g~~~~~~g--~~~~A~~~~~~a~~l~p~ 102 (281)
-|.+.+..| ++++|...|+++....|+
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 455577777 999999999999888876
No 215
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.41 E-value=1.3e-06 Score=68.31 Aligned_cols=78 Identities=10% Similarity=0.014 Sum_probs=69.8
Q ss_pred hHHHHHHHHHHHhc---CHHHHHHHHHHHHhcC-C-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDD---YFELAYDLYSQAIEIS-P-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKA 77 (281)
Q Consensus 3 ~~~~~~g~~~~~~~---~y~~Al~~y~~al~~~-p-~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g 77 (281)
+..|+.|..+.+.+ ++++++.++...++.+ | ++.++++++|..|+++|+|++|+.+++++++++|++..+...+-
T Consensus 33 ~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~ 112 (152)
T 1pc2_A 33 STQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 112 (152)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 56789999999988 7889999999999998 7 56899999999999999999999999999999999988877665
Q ss_pred HHH
Q 023550 78 TAC 80 (281)
Q Consensus 78 ~~~ 80 (281)
.+-
T Consensus 113 ~ie 115 (152)
T 1pc2_A 113 LID 115 (152)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 216
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.40 E-value=7e-06 Score=62.27 Aligned_cols=101 Identities=16% Similarity=0.091 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccC---HHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHHhhcHHHHHHHHH
Q 023550 19 ELAYDLYSQAIEISPNSAELFADRAQASIKLQN---FTEAVADANRAIELEP-SMSKAYWRKATACMKLEEYETAKVALE 94 (281)
Q Consensus 19 ~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~---~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~~g~~~~A~~~~~ 94 (281)
....+.|.+-+ ...-++...++.|+++++..+ ..+++..+...++.+| ...+++|.+|.+++++|+|..|+.+..
T Consensus 24 ~~l~~qy~~E~-~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d 102 (134)
T 3o48_A 24 EILRQQVVSEG-GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVD 102 (134)
T ss_dssp HHHHHHHHHTT-GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 33444454433 233357899999999999865 5578999999999888 458899999999999999999999999
Q ss_pred HhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 95 KGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 95 ~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
.+++.+|+|..+......+..++...
T Consensus 103 ~lL~~eP~N~QA~~Lk~~Ie~ki~kd 128 (134)
T 3o48_A 103 TLFEHERNNKQVGALKSMVEDKIQKE 128 (134)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhCCCCHHHHHHHHHHHHHHHhh
Confidence 99999999999999998888887653
No 217
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.39 E-value=2.6e-06 Score=78.42 Aligned_cols=99 Identities=11% Similarity=0.025 Sum_probs=52.9
Q ss_pred HHHHHHHHHh----cCHHHHHHHHHHHHhcCCCCHHHHHHHHHH-H--HHccCHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 023550 6 EKKAKEAFID----DYFELAYDLYSQAIEISPNSAELFADRAQA-S--IKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (281)
Q Consensus 6 ~~~g~~~~~~----~~y~~Al~~y~~al~~~p~~~~~~~~~a~~-~--~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 78 (281)
+..|..+... +++++|+.+|.++. |.++.+++++|.+ + ...+++++|+.+|++++..+ ++.+++.+|.
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~ 291 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGK 291 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHH
Confidence 4445444433 45566666666655 4555555566655 2 24455666666666555433 5555555555
Q ss_pred HHHHhh-----cHHHHHHHHHHhhhcCCCChhHHHHHHHH
Q 023550 79 ACMKLE-----EYETAKVALEKGASLAPGDSRFTNLIKEC 113 (281)
Q Consensus 79 ~~~~~g-----~~~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (281)
+|. .| ++++|+.+|+++. +++......++.+
T Consensus 292 ~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~ 327 (452)
T 3e4b_A 292 LYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQI 327 (452)
T ss_dssp HHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHH
T ss_pred HHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHH
Confidence 555 33 5555555555555 4444444444444
No 218
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.39 E-value=1.9e-06 Score=74.33 Aligned_cols=87 Identities=10% Similarity=0.061 Sum_probs=80.5
Q ss_pred CHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHc-----cCHHHHHHHHHHHHHcCCCc-HHHHHHHHHHHHHh-hcHH
Q 023550 17 YFELAYDLYSQAIEISPN--SAELFADRAQASIKL-----QNFTEAVADANRAIELEPSM-SKAYWRKATACMKL-EEYE 87 (281)
Q Consensus 17 ~y~~Al~~y~~al~~~p~--~~~~~~~~a~~~~~l-----~~~~~A~~~~~~al~l~p~~-~~a~~~~g~~~~~~-g~~~ 87 (281)
....|...+.++++++|+ +..+|..+|..|.++ |+.++|.+.|++|++++|+. ..+++.+|..+... |+++
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 467899999999999999 677999999999996 99999999999999999974 99999999999884 9999
Q ss_pred HHHHHHHHhhhcCCCC
Q 023550 88 TAKVALEKGASLAPGD 103 (281)
Q Consensus 88 ~A~~~~~~a~~l~p~~ 103 (281)
.|..++++++..+|..
T Consensus 258 ~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 258 GFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHcCCCCC
Confidence 9999999999998874
No 219
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.36 E-value=4.3e-06 Score=64.17 Aligned_cols=93 Identities=14% Similarity=0.018 Sum_probs=80.4
Q ss_pred hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH----hhcHHHHH
Q 023550 15 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK----LEEYETAK 90 (281)
Q Consensus 15 ~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~g~~~~A~ 90 (281)
.+|+++|+.+|.++.+..... +. +|.+|...+.+++|+.+|+++... .++.+++.+|.+|.. .+++++|+
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~~--a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEMF--GC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCTT--HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCHh--hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 468999999999999987444 34 999999999999999999999987 688999999999999 89999999
Q ss_pred HHHHHhhhcCCCChhHHHHHHHHHH
Q 023550 91 VALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 91 ~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (281)
.+|+++.+. ++......+..+..
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~y~ 104 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYKQY 104 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHH
Confidence 999999887 45667777776654
No 220
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.33 E-value=2.3e-05 Score=60.21 Aligned_cols=88 Identities=17% Similarity=0.134 Sum_probs=79.0
Q ss_pred CCCHHHHHHHHHHHHHccC---HHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHH
Q 023550 33 PNSAELFADRAQASIKLQN---FTEAVADANRAIELEP-SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (281)
Q Consensus 33 p~~~~~~~~~a~~~~~l~~---~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~ 108 (281)
.-+....++.|+++++..+ ..+++..++..++.+| ...+++|.+|.+++++|+|.+|+.+.+.+++.+|+|.++..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 4568899999999999875 5578999999999888 56889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 023550 109 LIKECEERIAEE 120 (281)
Q Consensus 109 ~l~~~~~~l~~~ 120 (281)
....+..++...
T Consensus 116 Lk~~Ie~~i~kd 127 (144)
T 1y8m_A 116 LKSMVEDKIQKE 127 (144)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999888888664
No 221
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.30 E-value=6.4e-07 Score=67.91 Aligned_cols=81 Identities=16% Similarity=0.323 Sum_probs=70.7
Q ss_pred CcccccCCCeEEEEEEecCCC--CcceEEEEeeeEEEEEEEcCCCCeeeecccccccc-ccCc--ceEEEeCcEEEEEEe
Q 023550 175 RHEFYQKPEEVVVTVFAKGIP--AKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKI-IPAK--CRYEVLSTKVEIRLA 249 (281)
Q Consensus 175 r~~w~Qt~~~v~i~v~~k~~~--~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I-~p~~--s~~~v~~~kiei~L~ 249 (281)
|+.=.|++++|+|.|.+..++ .+++.+.++++.|.++.+ +|.|.+.|-|+| +++. ++|......++|+|.
T Consensus 5 ~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~-----PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLp 79 (134)
T 2k8q_A 5 RFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRLRFPHELIDDERSTAQYDSKDECINVKVA 79 (134)
T ss_dssp EEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS-----SSCEEECCSSCEECCSSCEEEEETTTTEEEEEEE
T ss_pred eEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC-----CeEEEecCCCeeecCCCcceeEeccCCEEEEEEe
Confidence 677789999999999999999 899999999999999986 799999999999 5444 366666679999999
Q ss_pred ecCC-CCCCccc
Q 023550 250 KAEP-IQWSSLE 260 (281)
Q Consensus 250 K~~~-~~W~~L~ 260 (281)
|..+ +.|+.|.
T Consensus 80 K~~~Ge~F~dLD 91 (134)
T 2k8q_A 80 KLNKNEYFEDLD 91 (134)
T ss_dssp ESSTTCCCSSTT
T ss_pred CCCCCCCCCCcc
Confidence 9987 7899985
No 222
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.30 E-value=4e-06 Score=60.94 Aligned_cols=78 Identities=18% Similarity=0.179 Sum_probs=67.0
Q ss_pred CcccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCC-----C----------CeeeeccccccccccCcceEEE
Q 023550 175 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E----------EAYHFQPRLFGKIIPAKCRYEV 239 (281)
Q Consensus 175 r~~w~Qt~~~v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~-----~----------~~~~~~~~L~~~I~p~~s~~~v 239 (281)
+++|+++++.+.|.+-++|+.+++++|.+..+.|.|+..... + ..|.-.+.|...|+++..+.+.
T Consensus 6 ~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~~ 85 (100)
T 3gla_A 6 RVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAG 85 (100)
T ss_dssp CEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEEE
T ss_pred cEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEEEE
Confidence 689999999999999999999999999999999999854321 1 1355677899999999999999
Q ss_pred eCcEEEEEEeecC
Q 023550 240 LSTKVEIRLAKAE 252 (281)
Q Consensus 240 ~~~kiei~L~K~~ 252 (281)
.++.++|+|.|++
T Consensus 86 ~~GvL~I~~pK~~ 98 (100)
T 3gla_A 86 RNGVLEIRIPKRP 98 (100)
T ss_dssp ETTEEEEEEEBC-
T ss_pred eCCEEEEEEecCC
Confidence 9999999999975
No 223
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.23 E-value=2.8e-06 Score=77.84 Aligned_cols=104 Identities=13% Similarity=0.156 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC----------------
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP---------------- 67 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p---------------- 67 (281)
.+...|..++..|+|++|+.+|+++ ..|..+|.|+.++|+|++|++.++++. ++
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef 193 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEF 193 (449)
T ss_dssp -------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcH
Confidence 4566777777777777777777765 356777777777777777777777772 22
Q ss_pred -----------CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH
Q 023550 68 -----------SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (281)
Q Consensus 68 -----------~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (281)
.+++-...+...|...|++++|+..|+.++.+++........++.+..+.
T Consensus 194 ~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky 254 (449)
T 1b89_A 194 RLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 254 (449)
T ss_dssp HHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhc
Confidence 11122233446788889999999999999999999888888887776543
No 224
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.22 E-value=8e-06 Score=83.69 Aligned_cols=105 Identities=13% Similarity=0.148 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC----------------
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP---------------- 67 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p---------------- 67 (281)
.+...|..++..|+|++|+.+|.++ ..|..+|.+|.++|+|++|++.+++|.....
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~L 1268 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRL 1268 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHH
Confidence 5678999999999999999999995 4899999999999999999999999854433
Q ss_pred ---------CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHH
Q 023550 68 ---------SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (281)
Q Consensus 68 ---------~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (281)
.+++.+..++..|...|.|++|+..|+.++.+++.+......++.+..+
T Consensus 1269 A~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaK 1326 (1630)
T 1xi4_A 1269 AQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 1326 (1630)
T ss_pred HHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHh
Confidence 1334455677778889999999999999999998887777666666543
No 225
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.22 E-value=7.4e-06 Score=71.73 Aligned_cols=100 Identities=8% Similarity=-0.014 Sum_probs=83.2
Q ss_pred HHHHHHHhc--CHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHc----------CCCcHHHH
Q 023550 8 KAKEAFIDD--YFELAYDLYSQAIEISPN--SAELFADRAQASIKLQNFTEAVADANRAIEL----------EPSMSKAY 73 (281)
Q Consensus 8 ~g~~~~~~~--~y~~Al~~y~~al~~~p~--~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l----------~p~~~~a~ 73 (281)
.|...+..| ++++|+..|+++....|+ ....+++ +++++|+|++|...++.++++ +|+++.++
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~L 258 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFL 258 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHH
Confidence 343355555 999999999999888886 3445555 999999999999999988876 58899999
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHH
Q 023550 74 WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (281)
Q Consensus 74 ~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~ 112 (281)
.++..+.+.+|+ +|.++++++...+|+++-+.....+
T Consensus 259 aN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~~~k 295 (310)
T 3mv2_B 259 ANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHHQEI 295 (310)
T ss_dssp HHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHHHHH
Confidence 999999999998 8999999999999999866555443
No 226
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.22 E-value=8.5e-06 Score=59.46 Aligned_cols=79 Identities=16% Similarity=0.213 Sum_probs=68.2
Q ss_pred CcccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCCCC----------eeeeccccccccccCcceEEEeCcEE
Q 023550 175 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEE----------AYHFQPRLFGKIIPAKCRYEVLSTKV 244 (281)
Q Consensus 175 r~~w~Qt~~~v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~~~----------~~~~~~~L~~~I~p~~s~~~v~~~ki 244 (281)
.++|+++++.+.|.+-++|+.+++++|.+..+.|.|+-....+. .|.-.+.|...|+++..+.+..++.+
T Consensus 8 ~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~GvL 87 (102)
T 4fei_A 8 AADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAGGVL 87 (102)
T ss_dssp CEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEETTEE
T ss_pred cEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEECCEE
Confidence 78999999999999999999999999999999999985432111 35567789999999999999999999
Q ss_pred EEEEeecCC
Q 023550 245 EIRLAKAEP 253 (281)
Q Consensus 245 ei~L~K~~~ 253 (281)
+|+|.|+++
T Consensus 88 ~I~lpK~~~ 96 (102)
T 4fei_A 88 TVRFEKLRP 96 (102)
T ss_dssp EEEEEBSSC
T ss_pred EEEEEccCc
Confidence 999999864
No 227
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.21 E-value=8.2e-06 Score=73.44 Aligned_cols=98 Identities=12% Similarity=0.107 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC----------------------------------------------CHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPN----------------------------------------------SAE 37 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~----------------------------------------------~~~ 37 (281)
.+...|..|+..|+|++|+++|.+++...+. ...
T Consensus 57 al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 57 SILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 3566777777777777777777766553211 134
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHc------CCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCC
Q 023550 38 LFADRAQASIKLQNFTEAVADANRAIEL------EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (281)
Q Consensus 38 ~~~~~a~~~~~l~~~~~A~~~~~~al~l------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p 101 (281)
++.++|.+|...|+|.+|+..+..++.. .+....++...|.+|..+|+|.+|..++++++...+
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 137 LSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 5677888888889999999888888765 234467888889999999999999999988887643
No 228
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.18 E-value=8.4e-06 Score=59.67 Aligned_cols=81 Identities=17% Similarity=0.336 Sum_probs=70.6
Q ss_pred CcccccCCCeEEEEEEecCCC--CcceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCcc---eEEEeCcEEEEEEe
Q 023550 175 RHEFYQKPEEVVVTVFAKGIP--AKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKC---RYEVLSTKVEIRLA 249 (281)
Q Consensus 175 r~~w~Qt~~~v~i~v~~k~~~--~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~L~~~I~p~~s---~~~v~~~kiei~L~ 249 (281)
++.=.|++++|+|.|.+..++ ..++.+.+.++.+.+.+. +|-|.+.|.++|..++. +|.+..+.+.|+|.
T Consensus 19 ~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~-----PYyLRL~lP~~vved~~~~A~YD~d~g~~~v~lp 93 (115)
T 3eud_A 19 RFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRLRFPHELIDDERSTAQYDSKDECINVKVA 93 (115)
T ss_dssp CEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET-----TEEEEEECSSCEECSTTCEEEEETTTTEEEEEEE
T ss_pred cEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC-----CeEEEEecCcceecCCCcceEEeCCCcEEEEEEc
Confidence 788899999999999999877 779999999999999985 89999999999965433 78888889999999
Q ss_pred ecCC-CCCCccc
Q 023550 250 KAEP-IQWSSLE 260 (281)
Q Consensus 250 K~~~-~~W~~L~ 260 (281)
|.++ +..+.|.
T Consensus 94 K~~~GE~F~dLD 105 (115)
T 3eud_A 94 KLNKNEYFEDLD 105 (115)
T ss_dssp ESSTTCCCCCTT
T ss_pred CCcCCCcCCCcc
Confidence 9987 6777764
No 229
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.12 E-value=1.2e-05 Score=63.32 Aligned_cols=93 Identities=15% Similarity=0.138 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC-------
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------AELFADRAQASIKLQNFTEAVADANRAIELEP------- 67 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~---------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p------- 67 (281)
.++++...++..|.|+.|+.+.+.++....++ ...+..+|.+++..++|..|...|++||.+..
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 36888999999999999999999977764333 34788999999999999999999999986421
Q ss_pred ------------------CcHHHHHHHHHHHHHhhcHHHHHHHHHHh
Q 023550 68 ------------------SMSKAYWRKATACMKLEEYETAKVALEKG 96 (281)
Q Consensus 68 ------------------~~~~a~~~~g~~~~~~g~~~~A~~~~~~a 96 (281)
.+.+..|+.+.||..+|++++|+..++..
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI 148 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 12368899999999999999999988754
No 230
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.09 E-value=3e-05 Score=79.53 Aligned_cols=89 Identities=18% Similarity=0.173 Sum_probs=74.1
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC--------------
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS-------------- 68 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~-------------- 68 (281)
..|++.|.++...|+|++|+..|.++ +++..|...|.++.++|+|++|++.+..|....+.
T Consensus 1106 ~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl 1180 (1630)
T 1xi4_A 1106 AVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKT 1180 (1630)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhh
Confidence 46888999999999999999999775 78899999999999999999999999887754422
Q ss_pred -------------cHHHHHHHHHHHHHhhcHHHHHHHHHHh
Q 023550 69 -------------MSKAYWRKATACMKLEEYETAKVALEKG 96 (281)
Q Consensus 69 -------------~~~a~~~~g~~~~~~g~~~~A~~~~~~a 96 (281)
+...++..|..++..|+|++|..+|.++
T Consensus 1181 ~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1181 NRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred cCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 2345677888888888888888888875
No 231
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.08 E-value=1.8e-05 Score=59.78 Aligned_cols=79 Identities=13% Similarity=0.053 Sum_probs=68.6
Q ss_pred CcccccCCCeEEEEEEecCCCCcceEEEEee-eEEEEEEEcCCC--C---------eeeeccccccccccCcc-eEEEeC
Q 023550 175 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGE-QILSVSIDVPGE--E---------AYHFQPRLFGKIIPAKC-RYEVLS 241 (281)
Q Consensus 175 r~~w~Qt~~~v~i~v~~k~~~~~~~~v~~~~-~~l~~~~~~~~~--~---------~~~~~~~L~~~I~p~~s-~~~v~~ 241 (281)
.++|+++++.+.|.+-++|+.+++++|.+.. +.|.|+...... . .|.-.+.|...|+++.. +.+..+
T Consensus 26 ~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~~~ 105 (123)
T 3aab_A 26 PVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYEN 105 (123)
T ss_dssp CEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEEEET
T ss_pred cEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeEEcC
Confidence 6899999999999999999999999999999 999999764321 1 45556789999999998 899999
Q ss_pred cEEEEEEeecCC
Q 023550 242 TKVEIRLAKAEP 253 (281)
Q Consensus 242 ~kiei~L~K~~~ 253 (281)
+.+.|+|.|.+.
T Consensus 106 GvL~I~lPK~~~ 117 (123)
T 3aab_A 106 GVLTIRIPIAGT 117 (123)
T ss_dssp TEEEEEEEGGGE
T ss_pred CEEEEEEEcCCC
Confidence 999999999764
No 232
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.00 E-value=1.8e-05 Score=71.21 Aligned_cols=97 Identities=13% Similarity=0.081 Sum_probs=82.5
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-------c
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI------SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS-------M 69 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~-------~ 69 (281)
..+...|..++..|+|.+|+..+.+++.. .+....++...+.+|..+|+|.+|...+++++.+.+. .
T Consensus 136 ~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 215 (434)
T 4b4t_Q 136 SLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTV 215 (434)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHH
Confidence 34677899999999999999999999876 2333688999999999999999999999999976432 2
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023550 70 SKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l 99 (281)
...+...|..+...|+|.+|..+|.++++.
T Consensus 216 ~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 216 AELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 456778899999999999999999998864
No 233
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.98 E-value=3.6e-05 Score=56.00 Aligned_cols=78 Identities=17% Similarity=0.160 Sum_probs=66.1
Q ss_pred cccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcC---CC-----CeeeeccccccccccCcceEEE-eCcEEEE
Q 023550 176 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEI 246 (281)
Q Consensus 176 ~~w~Qt~~~v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~---~~-----~~~~~~~~L~~~I~p~~s~~~v-~~~kiei 246 (281)
.+|+++++.+.|.+-+.|+.+++++|.+..+.|.|+.... ++ ..|.-.+.|...|+++..+.++ .++.+.|
T Consensus 4 vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~I 83 (101)
T 2wj5_A 4 AQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSI 83 (101)
T ss_dssp CCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEEE
T ss_pred EEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEEE
Confidence 6899999999999999999999999999999999986432 11 1255577899999999999999 6889999
Q ss_pred EEeecCC
Q 023550 247 RLAKAEP 253 (281)
Q Consensus 247 ~L~K~~~ 253 (281)
+|.|.+.
T Consensus 84 ~lPK~~~ 90 (101)
T 2wj5_A 84 QATPASA 90 (101)
T ss_dssp EECBCCC
T ss_pred EEECCCc
Confidence 9999754
No 234
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.90 E-value=5.5e-05 Score=59.18 Aligned_cols=80 Identities=19% Similarity=0.233 Sum_probs=67.4
Q ss_pred CCcccccCCCeEEEEEEecCCCCcceEEEEe-eeEEEEEEEcCC-----C----------CeeeeccccccccccCcceE
Q 023550 174 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFG-EQILSVSIDVPG-----E----------EAYHFQPRLFGKIIPAKCRY 237 (281)
Q Consensus 174 ~r~~w~Qt~~~v~i~v~~k~~~~~~~~v~~~-~~~l~~~~~~~~-----~----------~~~~~~~~L~~~I~p~~s~~ 237 (281)
.+++|+++++.+.|.+-+.|+.+++++|.+. .+.|.|+..... + ..|.-.+.|...|+++..+.
T Consensus 44 p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A 123 (151)
T 1gme_A 44 ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKA 123 (151)
T ss_dssp GCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEE
Confidence 4799999999999999999999999999995 578999864321 1 13556778999999999999
Q ss_pred EEeCcEEEEEEeecCC
Q 023550 238 EVLSTKVEIRLAKAEP 253 (281)
Q Consensus 238 ~v~~~kiei~L~K~~~ 253 (281)
+..++.++|+|.|.+.
T Consensus 124 ~~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 124 GLENGVLTVTVPKAEV 139 (151)
T ss_dssp EEETTEEEEEEECCCC
T ss_pred EEECCEEEEEEEccCc
Confidence 9999999999999764
No 235
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=97.86 E-value=7.3e-05 Score=59.13 Aligned_cols=78 Identities=12% Similarity=0.145 Sum_probs=67.4
Q ss_pred cccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCC-----C-----------CeeeeccccccccccCcceEEE
Q 023550 176 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E-----------EAYHFQPRLFGKIIPAKCRYEV 239 (281)
Q Consensus 176 ~~w~Qt~~~v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~-----~-----------~~~~~~~~L~~~I~p~~s~~~v 239 (281)
++++++++.+.|.+-+.|+.+++++|.+..+.|.|+..... + ..|.-.+.|...|+++..+.+.
T Consensus 59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~ 138 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF 138 (161)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE
T ss_pred eeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE
Confidence 89999999999999999999999999999999999864322 1 1455567899999999999999
Q ss_pred eCcEEEEEEeecCC
Q 023550 240 LSTKVEIRLAKAEP 253 (281)
Q Consensus 240 ~~~kiei~L~K~~~ 253 (281)
.++.++|+|.|++.
T Consensus 139 ~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 139 ENGVLSVILPKAES 152 (161)
T ss_dssp ETTEEEEEEEBCGG
T ss_pred ECCEEEEEEEcCCC
Confidence 99999999999764
No 236
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.75 E-value=0.00016 Score=54.55 Aligned_cols=78 Identities=12% Similarity=0.037 Sum_probs=66.7
Q ss_pred hHHHHHHHHHHHhcCHHH---HHHHHHHHHhcC-C-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFEL---AYDLYSQAIEIS-P-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKA 77 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~---Al~~y~~al~~~-p-~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g 77 (281)
+..|+.|..+...++-.+ +|.++...+..+ | ..-++++.+|..++++|+|.+|+..++.+|+..|++..+.-.+.
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 456788888888777666 999999999876 4 56789999999999999999999999999999999988877665
Q ss_pred HHH
Q 023550 78 TAC 80 (281)
Q Consensus 78 ~~~ 80 (281)
.+-
T Consensus 116 ~i~ 118 (126)
T 1nzn_A 116 LID 118 (126)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 237
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.71 E-value=7.3e-05 Score=68.52 Aligned_cols=81 Identities=10% Similarity=0.003 Sum_probs=64.4
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----CCC
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~-----~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-----~p~ 68 (281)
+..+.+.|..|..+|+|++|+.+|.++|.. .+++ ...+.++|.+|..+|+|++|+..+++|+.+ +|+
T Consensus 329 ~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~ 408 (429)
T 3qwp_A 329 LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGRE 408 (429)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 456778899999999999999999999976 4444 566889999999999999999999999974 566
Q ss_pred cHH---HHHHHHHHHHH
Q 023550 69 MSK---AYWRKATACMK 82 (281)
Q Consensus 69 ~~~---a~~~~g~~~~~ 82 (281)
.+. .+..++.+...
T Consensus 409 Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 409 HSLIEDLILLLEECDAN 425 (429)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHH
Confidence 543 33445555443
No 238
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.70 E-value=0.00014 Score=53.24 Aligned_cols=78 Identities=13% Similarity=0.163 Sum_probs=65.6
Q ss_pred cccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcC---CC-----CeeeeccccccccccCcceEEE-eCcEEEE
Q 023550 176 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEI 246 (281)
Q Consensus 176 ~~w~Qt~~~v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~---~~-----~~~~~~~~L~~~I~p~~s~~~v-~~~kiei 246 (281)
-+++.+++.+.|.+-++|+.+++++|.+..+.|.|+-... ++ ..|.-.+.|...|+++.-+.++ .++.+.|
T Consensus 5 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I 84 (106)
T 3l1e_A 5 SEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTF 84 (106)
T ss_dssp EEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEE
T ss_pred eEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEE
Confidence 3688999999999999999999999999999999986321 11 1355567899999999999999 6889999
Q ss_pred EEeecCC
Q 023550 247 RLAKAEP 253 (281)
Q Consensus 247 ~L~K~~~ 253 (281)
+|.|.++
T Consensus 85 ~~PK~~~ 91 (106)
T 3l1e_A 85 SGPKIPS 91 (106)
T ss_dssp EEEBCCC
T ss_pred EEEccCc
Confidence 9999764
No 239
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.69 E-value=0.00048 Score=59.38 Aligned_cols=81 Identities=15% Similarity=0.065 Sum_probs=63.3
Q ss_pred CCCCHHHHHHHHHHHHH---c--------cCHHHHHHHHHHHHHcCCC--cHHHHHHHHHHHHHh-----hcHHHHHHHH
Q 023550 32 SPNSAELFADRAQASIK---L--------QNFTEAVADANRAIELEPS--MSKAYWRKATACMKL-----EEYETAKVAL 93 (281)
Q Consensus 32 ~p~~~~~~~~~a~~~~~---l--------~~~~~A~~~~~~al~l~p~--~~~a~~~~g~~~~~~-----g~~~~A~~~~ 93 (281)
+|+++++++=.|..... + +....|...++++++++|+ ++.+|..+|..|... |+.++|..+|
T Consensus 148 ~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~f 227 (301)
T 3u64_A 148 TRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAF 227 (301)
T ss_dssp CGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHH
Confidence 45556666555555433 1 3467889999999999999 678999999999996 9999999999
Q ss_pred HHhhhcCCCC-hhHHHHHHH
Q 023550 94 EKGASLAPGD-SRFTNLIKE 112 (281)
Q Consensus 94 ~~a~~l~p~~-~~~~~~l~~ 112 (281)
+++++++|+. .......+.
T Consensus 228 erAL~LnP~~~id~~v~YA~ 247 (301)
T 3u64_A 228 EHLTRYCSAHDPDHHITYAD 247 (301)
T ss_dssp HHHHHHCCTTCSHHHHHHHH
T ss_pred HHHHHhCCCCCchHHHHHHH
Confidence 9999999975 655544444
No 240
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.65 E-value=0.0004 Score=48.66 Aligned_cols=73 Identities=7% Similarity=0.096 Sum_probs=61.8
Q ss_pred ccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcCC-----C---CeeeeccccccccccCcceEEEe-CcEEEEEEe
Q 023550 179 YQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E---EAYHFQPRLFGKIIPAKCRYEVL-STKVEIRLA 249 (281)
Q Consensus 179 ~Qt~~~v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~-----~---~~~~~~~~L~~~I~p~~s~~~v~-~~kiei~L~ 249 (281)
+++++.+.|.+-++|+.+++++|.+..+.|.|+..... + ..|.=.+.|...|+++.-+.++. ++.+.|+|.
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lP 82 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP 82 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEE
Confidence 57889999999999999999999999999999864321 1 24666778999999999999998 889999998
Q ss_pred ec
Q 023550 250 KA 251 (281)
Q Consensus 250 K~ 251 (281)
|.
T Consensus 83 K~ 84 (85)
T 3q9p_A 83 MP 84 (85)
T ss_dssp CC
T ss_pred cC
Confidence 85
No 241
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.64 E-value=7e-05 Score=68.73 Aligned_cols=71 Identities=13% Similarity=0.061 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----CCC
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~-----~p~~---~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-----~p~ 68 (281)
+..+.+.|..|..+|+|++|+.+|.++|.. .|++ ...+.++|.+|..+|+|++|+..+++|+.+ +|+
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~ 419 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKD 419 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCC
Confidence 456788999999999999999999999976 4444 566899999999999999999999999974 566
Q ss_pred cHHH
Q 023550 69 MSKA 72 (281)
Q Consensus 69 ~~~a 72 (281)
.+..
T Consensus 420 Hp~~ 423 (433)
T 3qww_A 420 HPYI 423 (433)
T ss_dssp CHHH
T ss_pred ChHH
Confidence 6543
No 242
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.59 E-value=0.00046 Score=61.60 Aligned_cols=68 Identities=15% Similarity=0.071 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKA 72 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a 72 (281)
.+...|..++..|++++|+..+++|+.++|+ ...|..+|.++...|++++|++.|.+|++++|.....
T Consensus 279 ~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~ 346 (372)
T 3ly7_A 279 IYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTL 346 (372)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChH
Confidence 3445666777789999999999999999974 7788999999999999999999999999999988643
No 243
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.53 E-value=0.00095 Score=50.54 Aligned_cols=81 Identities=12% Similarity=-0.018 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDY---FELAYDLYSQAIEISPN-SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~---y~~Al~~y~~al~~~p~-~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 78 (281)
+..|+.|..+.+.++ ..++|.++...++.+|. .-+.++.+|..++++|+|.+|+..++.+++..|++..+.-.+..
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 456778888887654 56799999999998884 47999999999999999999999999999999999888777665
Q ss_pred HHHHh
Q 023550 79 ACMKL 83 (281)
Q Consensus 79 ~~~~~ 83 (281)
+--+.
T Consensus 121 Ie~ki 125 (134)
T 3o48_A 121 VEDKI 125 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54433
No 244
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.52 E-value=0.0013 Score=50.48 Aligned_cols=78 Identities=12% Similarity=-0.031 Sum_probs=66.3
Q ss_pred hHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDY---FELAYDLYSQAIEISPN-SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~---y~~Al~~y~~al~~~p~-~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 78 (281)
+..|+.|..+.+..+ -.++|.++...+..+|. .-+.++.+|..++++|+|.+|+.+++.+|+..|++..+.-.+..
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 456788888887664 45799999999998884 57899999999999999999999999999999999887766555
Q ss_pred HH
Q 023550 79 AC 80 (281)
Q Consensus 79 ~~ 80 (281)
+-
T Consensus 120 Ie 121 (144)
T 1y8m_A 120 VE 121 (144)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 245
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=97.49 E-value=0.00026 Score=50.20 Aligned_cols=74 Identities=11% Similarity=0.143 Sum_probs=58.3
Q ss_pred cCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcC---CCC-----eeeeccccccccccCcceEEE-eCcEEEEEEee
Q 023550 180 QKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GEE-----AYHFQPRLFGKIIPAKCRYEV-LSTKVEIRLAK 250 (281)
Q Consensus 180 Qt~~~v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~---~~~-----~~~~~~~L~~~I~p~~s~~~v-~~~kiei~L~K 250 (281)
.+++.+.|++-+.|+.++++.|.+..+.|.|+.... ++. .|.-.+.|...|+++..+.++ .++.+.|+|.|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK 82 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGPR 82 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEECB
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEc
Confidence 467889999999999999999999999999986432 111 355677899999999999999 78899999999
Q ss_pred cCC
Q 023550 251 AEP 253 (281)
Q Consensus 251 ~~~ 253 (281)
...
T Consensus 83 ~~~ 85 (90)
T 2y1y_A 83 KQV 85 (90)
T ss_dssp C--
T ss_pred CCC
Confidence 753
No 246
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.46 E-value=0.00094 Score=64.63 Aligned_cols=60 Identities=13% Similarity=-0.056 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhcCHHHHH-HHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 023550 5 LEKKAKEAFIDDYFELAY-DLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE 64 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al-~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~ 64 (281)
|+..|..+...|+.++|. ..|.+|+...|.+..+++..+....+.|+++.|...|++++.
T Consensus 346 W~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~ 406 (679)
T 4e6h_A 346 WFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCID 406 (679)
T ss_dssp HHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 445555555555555565 666666666666665666666666666666666666666554
No 247
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.40 E-value=0.0032 Score=48.73 Aligned_cols=102 Identities=17% Similarity=-0.007 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHHhcCH------HHHHHHHHHHHhcCCCC--------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC
Q 023550 3 TDLEKKAKEAFIDDYF------ELAYDLYSQAIEISPNS--------AELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y------~~Al~~y~~al~~~p~~--------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~ 68 (281)
+.|+......-+.|+. ++-++.|.+|+..-|-. ..+|++.|.. ..+++.++|.+.|+.++.++..
T Consensus 14 d~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKk 92 (161)
T 4h7y_A 14 EDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKK 92 (161)
T ss_dssp HHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHH
Confidence 4566667777777888 88889999999987653 4566777755 5679999999999999999999
Q ss_pred cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChh
Q 023550 69 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 69 ~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~ 105 (281)
++++|...|.--.+.|+...|...+.+++.+.|.+..
T Consensus 93 FAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~ 129 (161)
T 4h7y_A 93 FAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLE 129 (161)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHH
Confidence 9999999999999999999999999999999998654
No 248
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.40 E-value=0.00068 Score=62.07 Aligned_cols=113 Identities=12% Similarity=0.018 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCC---------------------------CCHHHHHHHHHHHHHccCHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISP---------------------------NSAELFADRAQASIKLQNFTEAV 56 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p---------------------------~~~~~~~~~a~~~~~l~~~~~A~ 56 (281)
.+...|.++++.|+|++|++.|.++. ++ .+++-...+..+|.+.|++++|+
T Consensus 150 n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai 227 (449)
T 1b89_A 150 NFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELI 227 (449)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHH
Confidence 46678999999999999999999982 22 11222333447889999999999
Q ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHH--hhcHHHHHHHHHHhhhcCC-----CChhHHHHHHHHHHHHH
Q 023550 57 ADANRAIELEPSMSKAYWRKATACMK--LEEYETAKVALEKGASLAP-----GDSRFTNLIKECEERIA 118 (281)
Q Consensus 57 ~~~~~al~l~p~~~~a~~~~g~~~~~--~g~~~~A~~~~~~a~~l~p-----~~~~~~~~l~~~~~~l~ 118 (281)
..++.++.+++....++..+|.+|.+ .++..++++.|...+.+.| .+..+|..+.-+....+
T Consensus 228 ~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~~ 296 (449)
T 1b89_A 228 TMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYE 296 (449)
T ss_dssp HHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHTT
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999887764 5788888888887777766 66666666666554333
No 249
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.39 E-value=0.0028 Score=57.12 Aligned_cols=95 Identities=16% Similarity=0.045 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC----------------------HHHHHHHHHHHHHccCHHHHHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----------------------AELFADRAQASIKLQNFTEAVADANR 61 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~----------------------~~~~~~~a~~~~~l~~~~~A~~~~~~ 61 (281)
.+...|......++.+.|+..+.+|+.+.... ..+...++.+++.+|++.+|+..+..
T Consensus 117 ~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~ 196 (388)
T 2ff4_A 117 AEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEA 196 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 34556666777899999999999999984321 12344577788889999999999999
Q ss_pred HHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023550 62 AIELEPSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 62 al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
++..+|.+-.+|..+-.+|+..|+..+|+..|+++.+
T Consensus 197 ~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 197 LTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988754
No 250
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.33 E-value=0.0011 Score=64.08 Aligned_cols=98 Identities=5% Similarity=-0.003 Sum_probs=79.9
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEI-SPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATACMK 82 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~-~p~~~~~~~~~a~~~~~l~~-~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 82 (281)
|...++...+.|+.+.|..+|.+|++. .+....+|...|....+.++ ++.|...|+++++..|++...|...+.....
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~ 516 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIY 516 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHh
Confidence 555566666778889999999999887 44456777777777777654 8999999999999999998888888888888
Q ss_pred hhcHHHHHHHHHHhhhcCCC
Q 023550 83 LEEYETAKVALEKGASLAPG 102 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~l~p~ 102 (281)
.|+.+.|...|++++...|.
T Consensus 517 ~~~~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 517 VNEESQVKSLFESSIDKISD 536 (679)
T ss_dssp HTCHHHHHHHHHHHTTTSSS
T ss_pred CCCHHHHHHHHHHHHHhcCC
Confidence 89999999999999988873
No 251
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=97.33 E-value=0.00049 Score=55.04 Aligned_cols=78 Identities=12% Similarity=0.148 Sum_probs=62.4
Q ss_pred cccccCCCeEEEEEEecCCCCcceEEEEeeeEEEEEEEcC---CCC-----eeeeccccccccccCcceEEE-eCcEEEE
Q 023550 176 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GEE-----AYHFQPRLFGKIIPAKCRYEV-LSTKVEI 246 (281)
Q Consensus 176 ~~w~Qt~~~v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~---~~~-----~~~~~~~L~~~I~p~~s~~~v-~~~kiei 246 (281)
.+++++++.+.|.+-+.|+.+++++|++.++.|.|+-... ++. .|.-.+.|...|+++..+.++ .++.++|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I 145 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTV 145 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEE
Confidence 5889999999999999999999999999999999886432 111 255567899999999999999 6889999
Q ss_pred EEeecCC
Q 023550 247 RLAKAEP 253 (281)
Q Consensus 247 ~L~K~~~ 253 (281)
+|.|++.
T Consensus 146 ~lPK~~~ 152 (175)
T 2klr_A 146 NGPRKQV 152 (175)
T ss_dssp EEECC--
T ss_pred EEECCCC
Confidence 9999754
No 252
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.06 E-value=0.0025 Score=50.12 Aligned_cols=77 Identities=18% Similarity=0.106 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CC-------------------CCHHHHHHHHHHHHHccCHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI------SP-------------------NSAELFADRAQASIKLQNFTEAVA 57 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~------~p-------------------~~~~~~~~~a~~~~~l~~~~~A~~ 57 (281)
+.+...|+.+|..++|..|+..|+++|.+ .+ .+.++.+..|.||.+++++.+|+.
T Consensus 64 ~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~ 143 (167)
T 3ffl_A 64 QLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIA 143 (167)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHH
Confidence 45778899999999999999999998766 11 113688999999999999999999
Q ss_pred HHHHHHHcCCCcHHHHHHHHHHH
Q 023550 58 DANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 58 ~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
.++.. -.....++....+|..|
T Consensus 144 ~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 144 ILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHTS-CGGGCCHHHHHHHHHHC
T ss_pred HHhcC-CchhcCHHHHHHHHHHh
Confidence 76542 22234567777777654
No 253
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=96.89 E-value=0.0038 Score=54.48 Aligned_cols=80 Identities=15% Similarity=0.128 Sum_probs=68.1
Q ss_pred CCcccccCCC----eEEEEEEecCCCCcceEEEEeeeEEEEEEEcCC----C---CeeeeccccccccccCcceEEEe-C
Q 023550 174 YRHEFYQKPE----EVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG----E---EAYHFQPRLFGKIIPAKCRYEVL-S 241 (281)
Q Consensus 174 ~r~~w~Qt~~----~v~i~v~~k~~~~~~~~v~~~~~~l~~~~~~~~----~---~~~~~~~~L~~~I~p~~s~~~v~-~ 241 (281)
+..+.+.+++ .+.|++-++|+.+++++|.+..+.|.|+-.... + ..|.=.+.|...|+++..+.++. .
T Consensus 99 p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~n 178 (314)
T 2bol_A 99 FLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATITTD 178 (314)
T ss_dssp GGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEECSS
T ss_pred CccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEeCC
Confidence 3678889998 899999999999999999999999999864321 1 24666778999999999999999 8
Q ss_pred cEEEEEEeecCC
Q 023550 242 TKVEIRLAKAEP 253 (281)
Q Consensus 242 ~kiei~L~K~~~ 253 (281)
+.+.|+|.|.++
T Consensus 179 GVL~I~lPK~~~ 190 (314)
T 2bol_A 179 DVLVIEAPVNEP 190 (314)
T ss_dssp SEEEEEEEBSSC
T ss_pred CEEEEEEeccCc
Confidence 999999999765
No 254
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.88 E-value=0.0024 Score=62.19 Aligned_cols=61 Identities=21% Similarity=0.287 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhh
Q 023550 37 ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGA 97 (281)
Q Consensus 37 ~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~ 97 (281)
.++...+..++..|+|+.|+..+++|+...|.....|+.++.+|..+|+|+.|+-.+..+-
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 3556677778888999999999999999999999999999999999999999999988874
No 255
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.69 E-value=0.032 Score=51.74 Aligned_cols=101 Identities=11% Similarity=-0.117 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHH---------------------------------------
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQ--------------------------------------- 44 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~--------------------------------------- 44 (281)
-|+..+..+...|+.++|...|.+|+.. |.+..++...+.
T Consensus 215 lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~ 293 (493)
T 2uy1_A 215 VYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHL 293 (493)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHH
Confidence 4566666677777888888888888877 776444333222
Q ss_pred -HHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhh-cHHHHHHHHHHhhhcCCCChhH
Q 023550 45 -ASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE-EYETAKVALEKGASLAPGDSRF 106 (281)
Q Consensus 45 -~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g-~~~~A~~~~~~a~~l~p~~~~~ 106 (281)
...+.+..+.|...|.+| ...+.....|...|...+..+ +.+.|...|+.+++..|+++.+
T Consensus 294 ~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~ 356 (493)
T 2uy1_A 294 NYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLL 356 (493)
T ss_dssp HHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHH
Confidence 222345667777777777 332334556666666666666 4777888888887777766554
No 256
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.31 E-value=0.062 Score=45.59 Aligned_cols=63 Identities=24% Similarity=0.233 Sum_probs=58.9
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHH
Q 023550 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSK 71 (281)
Q Consensus 9 g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~ 71 (281)
...+++.|+.++|+......++.+|.|......+-..+.-.|+|+.|...++.+.+++|....
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 456788999999999999999999999999999999999999999999999999999998744
No 257
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.23 E-value=0.082 Score=48.92 Aligned_cols=91 Identities=9% Similarity=-0.029 Sum_probs=75.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 83 (281)
|...+....+.++.+.|...|.+| ...+.....|...|..-...+ +++.|...++.+++..|+++..+...+......
T Consensus 289 w~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~ 367 (493)
T 2uy1_A 289 RINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRI 367 (493)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc
Confidence 445555666788899999999999 443346677888888877777 599999999999999999988888888888899
Q ss_pred hcHHHHHHHHHHh
Q 023550 84 EEYETAKVALEKG 96 (281)
Q Consensus 84 g~~~~A~~~~~~a 96 (281)
|+.+.|...|+++
T Consensus 368 ~~~~~aR~l~er~ 380 (493)
T 2uy1_A 368 GDEENARALFKRL 380 (493)
T ss_dssp TCHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHH
Confidence 9999999999997
No 258
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.90 E-value=0.073 Score=47.89 Aligned_cols=93 Identities=14% Similarity=0.050 Sum_probs=75.5
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCC--CC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHcC------CC-cHHHH
Q 023550 7 KKAKEAFIDDYFELAYDLYSQAIEISP--NS----AELFADRAQASIKLQNFTEAVADANRAIELE------PS-MSKAY 73 (281)
Q Consensus 7 ~~g~~~~~~~~y~~Al~~y~~al~~~p--~~----~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~------p~-~~~a~ 73 (281)
..|..++..|+|.+|+..+.+.++.-. ++ .+.+......|..++++..+...+..|.... |. .+...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 679999999999999999999887521 12 5778889999999999999999998887543 11 24566
Q ss_pred HHHHHHHH-HhhcHHHHHHHHHHhhhc
Q 023550 74 WRKATACM-KLEEYETAKVALEKGASL 99 (281)
Q Consensus 74 ~~~g~~~~-~~g~~~~A~~~~~~a~~l 99 (281)
..-|..+. ..++|..|..+|-.+++-
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 66788899 899999999999998753
No 259
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.88 E-value=0.022 Score=55.51 Aligned_cols=58 Identities=21% Similarity=0.243 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANR 61 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~ 61 (281)
-+..++..+...|+|+-|+.+-.+|+...|.+...|+.+|.||+.+|+|+.|+-.++-
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNS 396 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINS 396 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhc
Confidence 3556788889999999999999999999999999999999999999999999865444
No 260
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.86 E-value=0.044 Score=49.86 Aligned_cols=99 Identities=5% Similarity=-0.054 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCC---CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC--Cc----HHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISP---NSAELFADRAQASIKLQNFTEAVADANRAIELEP--SM----SKAYW 74 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p---~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p--~~----~~a~~ 74 (281)
.+...|..+++.|++++|++.|.++..... +-.+++.....+++..++|..+...+.++-.+.. .+ .....
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 456789999999999999999999887632 2368888999999999999999999999876532 12 33455
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCC
Q 023550 75 RKATACMKLEEYETAKVALEKGASLAPG 102 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~l~p~ 102 (281)
..|..+...++|.+|...|..++.-...
T Consensus 213 ~~gl~~l~~r~f~~Aa~~f~e~~~t~~~ 240 (429)
T 4b4t_R 213 YYGIHCLAVRNFKEAAKLLVDSLATFTS 240 (429)
T ss_dssp HHHHGGGGTSCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhChHHHHHHHHHHHhccCCc
Confidence 6788888899999999999888765443
No 261
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.81 E-value=0.26 Score=38.99 Aligned_cols=91 Identities=9% Similarity=-0.004 Sum_probs=70.5
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH--c---------------CCCc
Q 023550 7 KKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE--L---------------EPSM 69 (281)
Q Consensus 7 ~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~--l---------------~p~~ 69 (281)
..+..++-.|.|..|+.++.. -+.....+..+.||.++++|..|+..++..+. . +|.+
T Consensus 38 L~~I~LyyngEY~R~Lf~L~~-----lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~D 112 (242)
T 3kae_A 38 LMSIVLYLNGEYTRALFHLHK-----LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGD 112 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-----CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTC
T ss_pred hhhhhhhhcchHhHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccch
Confidence 346777888888888877633 45677788889999999999999999999883 2 2334
Q ss_pred HHH-HHHHHHHHHHhhcHHHHHHHHHHhhhcCCC
Q 023550 70 SKA-YWRKATACMKLEEYETAKVALEKGASLAPG 102 (281)
Q Consensus 70 ~~a-~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~ 102 (281)
-+. +..+|..+.+.|+-++|+.+|.......+-
T Consensus 113 kEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~l 146 (242)
T 3kae_A 113 EEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFL 146 (242)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccc
Confidence 443 345789999999999999999998887764
No 262
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.42 E-value=0.32 Score=45.07 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=80.1
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHH
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEIS-PNSAELFADRAQASIKLQNFTEAVADANRAIELEP-SMSKAYWRKATACMK 82 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~-p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~ 82 (281)
+-..-..+.+.|++++|+.+|.+..... .-+...|..+-.+|.+.|++++|.+.++.....+- -+...|..+-.+|.+
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~ 187 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMD 187 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhh
Confidence 3344567889999999999999987652 22566788888899999999999999999887652 245677888899999
Q ss_pred hhcHHHHHHHHHHhhh--cCCCChhH
Q 023550 83 LEEYETAKVALEKGAS--LAPGDSRF 106 (281)
Q Consensus 83 ~g~~~~A~~~~~~a~~--l~p~~~~~ 106 (281)
.|++++|...|++..+ ..|+...+
T Consensus 188 ~g~~d~A~~ll~~Mr~~g~~ps~~T~ 213 (501)
T 4g26_A 188 TKNADKVYKTLQRLRDLVRQVSKSTF 213 (501)
T ss_dssp TTCHHHHHHHHHHHHHHTSSBCHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcCHHHH
Confidence 9999999999998766 45654433
No 263
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.56 E-value=0.14 Score=43.32 Aligned_cols=64 Identities=14% Similarity=0.039 Sum_probs=58.7
Q ss_pred HHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHH
Q 023550 44 QASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (281)
Q Consensus 44 ~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~ 107 (281)
..+++.|+..+|++.+...++.+|.|......+.+.+.-.|+|+.|...++.+.+++|......
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a 68 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 68 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHH
Confidence 4567789999999999999999999999999999999999999999999999999999876543
No 264
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.39 E-value=0.16 Score=45.40 Aligned_cols=60 Identities=12% Similarity=-0.002 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE 64 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~ 64 (281)
+...+..+...|++.+|+..+..++..+|-+-.++..+..+|...|+..+|++.|+++-+
T Consensus 174 ~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 174 HTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345677788999999999999999999999999999999999999999999999888654
No 265
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.11 E-value=0.42 Score=44.31 Aligned_cols=77 Identities=10% Similarity=-0.000 Sum_probs=61.1
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHH
Q 023550 39 FADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 39 ~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (281)
+..+|........+..|..+|.+|+.+.|.++.+|..+|.+....|+.-+|.-+|.+++....--+.+...+...-.
T Consensus 155 l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 155 LVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 34455555555678899999999999999999999999999999999999999999998765545555555555443
No 266
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=94.08 E-value=0.44 Score=36.78 Aligned_cols=71 Identities=15% Similarity=-0.002 Sum_probs=59.4
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhh
Q 023550 13 FIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE 84 (281)
Q Consensus 13 ~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g 84 (281)
...+|.++|-+.|..++......+-+|...|..-++.|+...|...+.+|+.++|..... +..+..-.+.|
T Consensus 71 ~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~-le~a~~nl~~~ 141 (161)
T 4h7y_A 71 KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM-LEIALRNLNLQ 141 (161)
T ss_dssp HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH-HHHHHHHHHTT
T ss_pred HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH-HHHHHHhhhcC
Confidence 566899999999999999888889999999999999999999999999999999987443 44444444444
No 267
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.04 E-value=0.71 Score=42.07 Aligned_cols=94 Identities=11% Similarity=0.086 Sum_probs=74.3
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCC--CC----HHHHHHHHHHHHHccCHHHHHHHHHHHHH---cCCCc----HHH
Q 023550 6 EKKAKEAFIDDYFELAYDLYSQAIEISP--NS----AELFADRAQASIKLQNFTEAVADANRAIE---LEPSM----SKA 72 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~p--~~----~~~~~~~a~~~~~l~~~~~A~~~~~~al~---l~p~~----~~a 72 (281)
...+..++..|+|.+|...+.......- .+ .+++......++..++|..|...++++.. -.+.. ...
T Consensus 141 ~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~ 220 (445)
T 4b4t_P 141 KDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEY 220 (445)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHH
Confidence 5678999999999999999999764321 12 57888899999999999999999988642 12222 445
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023550 73 YWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 73 ~~~~g~~~~~~g~~~~A~~~~~~a~~l 99 (281)
+...|..+.+.++|.+|..+|..++..
T Consensus 221 ~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 221 YNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 666889999999999999999988764
No 268
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.93 E-value=0.34 Score=44.90 Aligned_cols=77 Identities=14% Similarity=0.078 Sum_probs=64.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 81 (281)
+...|..+--...+..|..+|.+|+...|++...|..+|.++...|++-+|+-.|.+++....-.+.+.-++...+.
T Consensus 155 l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 155 LVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 45678888888899999999999999999999999999999999999999999999998765545555555544443
No 269
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=93.62 E-value=0.25 Score=42.92 Aligned_cols=71 Identities=10% Similarity=-0.024 Sum_probs=56.7
Q ss_pred CCCeEEEEEEe-cCCCCcceEEEEeeeEEEEEEEcCC-CC----------eeeeccccccccccCcceEEEeCcEEEEEE
Q 023550 181 KPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVPG-EE----------AYHFQPRLFGKIIPAKCRYEVLSTKVEIRL 248 (281)
Q Consensus 181 t~~~v~i~v~~-k~~~~~~~~v~~~~~~l~~~~~~~~-~~----------~~~~~~~L~~~I~p~~s~~~v~~~kiei~L 248 (281)
++..+.|.+.+ .|+.+++++|.+..+.|+|+..... .. .|.=.+.|...|+++.-+.+..++.+.|+|
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~~ 310 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVEA 310 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETTEEEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEEE
Confidence 45578888888 9999999999999999999864321 11 244456789999999999999999999999
Q ss_pred eec
Q 023550 249 AKA 251 (281)
Q Consensus 249 ~K~ 251 (281)
-|.
T Consensus 311 Pk~ 313 (314)
T 2bol_A 311 PLF 313 (314)
T ss_dssp EEE
T ss_pred ecC
Confidence 874
No 270
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=93.30 E-value=1.4 Score=40.78 Aligned_cols=89 Identities=10% Similarity=0.077 Sum_probs=70.9
Q ss_pred cCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHHhhcHHHHHHHH
Q 023550 16 DYFELAYDLYSQAIEIS-PNSAELFADRAQASIKLQNFTEAVADANRAIELEP-SMSKAYWRKATACMKLEEYETAKVAL 93 (281)
Q Consensus 16 ~~y~~Al~~y~~al~~~-p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~~g~~~~A~~~~ 93 (281)
++.++|.++|.+..... .-|...|..+..+|.+.|++++|++.++.....+- -+...|..+-.+|.+.|+.++|...|
T Consensus 84 ~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~ 163 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVD 163 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHH
Confidence 45788999999877652 22566788899999999999999999999887642 25567778888999999999999999
Q ss_pred HHhhhc--CCCCh
Q 023550 94 EKGASL--APGDS 104 (281)
Q Consensus 94 ~~a~~l--~p~~~ 104 (281)
.+..+. .|+..
T Consensus 164 ~~M~~~G~~Pd~~ 176 (501)
T 4g26_A 164 AHMVESEVVPEEP 176 (501)
T ss_dssp HHHHHTTCCCCHH
T ss_pred HHHHhcCCCCCHH
Confidence 988764 45433
No 271
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.05 E-value=0.84 Score=43.86 Aligned_cols=83 Identities=20% Similarity=0.119 Sum_probs=54.4
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------CCCcHHHHHHH----
Q 023550 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIEL--------EPSMSKAYWRK---- 76 (281)
Q Consensus 9 g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l--------~p~~~~a~~~~---- 76 (281)
...+...|++++|++... .-++...|..+|..+++.++++.|+.+|.++-.. ...+.+.+..+
T Consensus 659 f~~~l~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a 733 (814)
T 3mkq_A 659 FELALKVGQLTLARDLLT-----DESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDA 733 (814)
T ss_dssp HHHHHHHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eehhhhcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHH
Confidence 444556677777766643 3456789999999999999999999998885221 12222222222
Q ss_pred ---------HHHHHHhhcHHHHHHHHHHh
Q 023550 77 ---------ATACMKLEEYETAKVALEKG 96 (281)
Q Consensus 77 ---------g~~~~~~g~~~~A~~~~~~a 96 (281)
..+++.+|++++|++.|.+.
T Consensus 734 ~~~~~~~~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 734 ETTGKFNLAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHTTCHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHcCchHHHHHHHHHcCCHHHHHHHHHHc
Confidence 33566677888887776654
No 272
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=93.00 E-value=0.61 Score=36.92 Aligned_cols=88 Identities=9% Similarity=-0.027 Sum_probs=64.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC--------CcHHHH---
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP--------SMSKAY--- 73 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p--------~~~~a~--- 73 (281)
-..+-..+...|+++.|.+..... ++...|..+|...+..|+++-|..+|.++=..+. .+.+.+
T Consensus 8 ~~~rF~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kl 82 (177)
T 3mkq_B 8 PHIRFDLALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKM 82 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHH
T ss_pred hHHHHHHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHH
Confidence 345677888999999999987664 5688999999999999999999998887543221 122221
Q ss_pred ----------HHHHHHHHHhhcHHHHHHHHHHhh
Q 023550 74 ----------WRKATACMKLEEYETAKVALEKGA 97 (281)
Q Consensus 74 ----------~~~g~~~~~~g~~~~A~~~~~~a~ 97 (281)
.....+++.+|+++++++.|.+.-
T Consensus 83 a~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~ 116 (177)
T 3mkq_B 83 QNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGG 116 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred HHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCC
Confidence 223566777888888888876653
No 273
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=92.57 E-value=0.49 Score=48.35 Aligned_cols=93 Identities=10% Similarity=-0.034 Sum_probs=73.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc-CC----------------------CCHHHHHHHHHHHHHccCHHHHHHHHHH
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEI-SP----------------------NSAELFADRAQASIKLQNFTEAVADANR 61 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~-~p----------------------~~~~~~~~~a~~~~~l~~~~~A~~~~~~ 61 (281)
-+-+|..++..|++++|..+|.++-.- .. ..+.+|......+.+.+.++.+++.+..
T Consensus 845 ~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~l 924 (1139)
T 4fhn_B 845 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 377899999999999999999887321 01 1145677888888899999999999999
Q ss_pred HHHcCCC-c----HHHHHHHHHHHHHhhcHHHHHHHHHHhh
Q 023550 62 AIELEPS-M----SKAYWRKATACMKLEEYETAKVALEKGA 97 (281)
Q Consensus 62 al~l~p~-~----~~a~~~~g~~~~~~g~~~~A~~~~~~a~ 97 (281)
|++..+. + ...|.++-.++..+|+|++|..++...-
T Consensus 925 Ai~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~p 965 (1139)
T 4fhn_B 925 ADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLS 965 (1139)
T ss_dssp HHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHH
T ss_pred HHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCC
Confidence 9987643 2 2367888899999999999988886543
No 274
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=91.34 E-value=2.5 Score=33.41 Aligned_cols=89 Identities=17% Similarity=0.079 Sum_probs=65.9
Q ss_pred ChhHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 023550 1 MATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 1 ma~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
|-+.+...-...++=.+|+.++-+-.=. .|..+++-+.++..++-.|.|..|+-.+. .-+-..+.|..+.||
T Consensus 1 m~~~~~~kI~Ks~kY~dYdt~~fLsa~L---~~~~~eY~lL~~I~LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy 72 (242)
T 3kae_A 1 MDSKLIGKICKSIRYRDYETAIFLAACL---LPCKPEYRMLMSIVLYLNGEYTRALFHLH-----KLNTCTSKYYESLCY 72 (242)
T ss_dssp --CTHHHHHHHHHHTTCHHHHHHHHHHH---C----CTHHHHHHHHHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhhcccccHHHHHHHHH---ccCChHHHhhhhhhhhhcchHhHHHHHHH-----hcchHHHHHHHHHHH
Confidence 3345556666778889999988665433 34445677788899999999999876432 234577889999999
Q ss_pred HHhhcHHHHHHHHHHhh
Q 023550 81 MKLEEYETAKVALEKGA 97 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~a~ 97 (281)
..+++|..|+.+++..+
T Consensus 73 ~klKdYkkA~~~le~il 89 (242)
T 3kae_A 73 KKKKDYKKAIKSLESIL 89 (242)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999988
No 275
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=90.31 E-value=2.8 Score=40.10 Aligned_cols=89 Identities=16% Similarity=0.109 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWR 75 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~--------~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~ 75 (281)
.|...|..+.+.++++.|+++|.++-+. ...+.+.+..++......|++..|...|.+ .+ + +-.
T Consensus 683 ~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~---~g--~---~~~ 754 (814)
T 3mkq_A 683 KWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWI---AG--D---IQG 754 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHH---HT--C---HHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHH---cC--C---HHH
Confidence 5778899999999999999999986332 233444555566666666666666554333 11 1 122
Q ss_pred HHHHHHHhhcHHHHHHHHHHhhhcCCCC
Q 023550 76 KATACMKLEEYETAKVALEKGASLAPGD 103 (281)
Q Consensus 76 ~g~~~~~~g~~~~A~~~~~~a~~l~p~~ 103 (281)
.-..|..+++|++|...-+ .+.|..
T Consensus 755 a~~~~~~~~~~~~A~~lA~---~~~~~~ 779 (814)
T 3mkq_A 755 AKDLLIKSQRFSEAAFLGS---TYGLGD 779 (814)
T ss_dssp HHHHHHHTTCHHHHHHHHH---HTTCCH
T ss_pred HHHHHHHcCChHHHHHHHH---HhCCCh
Confidence 3456888999999976544 466655
No 276
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=89.77 E-value=1.4 Score=30.16 Aligned_cols=30 Identities=30% Similarity=0.226 Sum_probs=20.9
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
|..+..+|..+-+.|+|++|+.+|..+++.
T Consensus 19 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 19 ARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 345666777777777777777777776654
No 277
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=89.36 E-value=1.6 Score=29.82 Aligned_cols=29 Identities=28% Similarity=0.213 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
..+..+|..+-+.|+|++|+.+|..+++.
T Consensus 12 i~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 12 RKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 45666677777777777777777776654
No 278
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=88.77 E-value=8.4 Score=38.92 Aligned_cols=94 Identities=15% Similarity=0.044 Sum_probs=73.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHh-----cCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC--CCcHHHHHHHH
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIE-----ISPNSAELFADRAQASIKLQNFTEAVADANRAIELE--PSMSKAYWRKA 77 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~-----~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~--p~~~~a~~~~g 77 (281)
+...-+.+.+.|+.++|..+|.+.-+ ..| |...|.-+-..|.+.|++++|++.++.....+ | |...|..+-
T Consensus 130 ynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~P-DvvTYntLI 207 (1134)
T 3spa_A 130 LLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTP-DLLSYAAAL 207 (1134)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC-cHHHHHHHH
Confidence 44556678899999999999976432 244 56678888899999999999999999988765 5 445666666
Q ss_pred HHHHHhhc-HHHHHHHHHHhhhcC
Q 023550 78 TACMKLEE-YETAKVALEKGASLA 100 (281)
Q Consensus 78 ~~~~~~g~-~~~A~~~~~~a~~l~ 100 (281)
.++.+.|+ .++|...|++..+..
T Consensus 208 ~glcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 208 QCMGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHHHhCCCcHHHHHHHHHHHHHcC
Confidence 67888887 578889998877654
No 279
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.73 E-value=1.8 Score=40.21 Aligned_cols=69 Identities=14% Similarity=0.042 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC--C---cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCCh
Q 023550 36 AELFADRAQASIKLQNFTEAVADANRAIELEP--S---MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p--~---~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~ 104 (281)
..++..+-+.|+..+.|+.|.....++.--.. . ....+|..|.++.-.++|.+|..+|..|++..|.+.
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 45566777888899999999999998852211 1 255677889999999999999999999999988764
No 280
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=87.35 E-value=9.8 Score=33.95 Aligned_cols=74 Identities=12% Similarity=0.059 Sum_probs=55.2
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHcCC------CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcC---CCChhHHHHHH
Q 023550 41 DRAQASIKLQNFTEAVADANRAIELEP------SMSKAYWRKATACMKLEEYETAKVALEKGASLA---PGDSRFTNLIK 111 (281)
Q Consensus 41 ~~a~~~~~l~~~~~A~~~~~~al~l~p------~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~---p~~~~~~~~l~ 111 (281)
++|..|+..|+|.+|+..+.+.++--. ...+++..-...|..++++.++...+.++.... +.++.....+.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 789999999999999999888876321 236678888899999999999999999887653 23444444444
Q ss_pred HHH
Q 023550 112 ECE 114 (281)
Q Consensus 112 ~~~ 114 (281)
.|.
T Consensus 184 ~~~ 186 (394)
T 3txn_A 184 LQS 186 (394)
T ss_dssp HHH
T ss_pred HHh
Confidence 433
No 281
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=86.74 E-value=5.2 Score=30.44 Aligned_cols=36 Identities=11% Similarity=0.051 Sum_probs=17.2
Q ss_pred HHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023550 63 IELEPSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 63 l~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
+...+-++..++.+|.+|.++|+-.+|...+.+|-+
T Consensus 118 l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 118 LKNNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp C--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 333344455555555555555555555555555443
No 282
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=86.62 E-value=2.2 Score=33.66 Aligned_cols=50 Identities=14% Similarity=0.181 Sum_probs=42.4
Q ss_pred HHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023550 45 ASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 45 ~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l 99 (281)
..+.+|+++.|.+.++.. ++...|-++|......|+++-|..||+++-.+
T Consensus 14 LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~ 63 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSF 63 (177)
T ss_dssp HHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH
T ss_pred HHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCH
Confidence 346789999999987664 57789999999999999999999999987443
No 283
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=85.80 E-value=5.5 Score=30.86 Aligned_cols=30 Identities=7% Similarity=-0.037 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPN 34 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p~ 34 (281)
-+..|..+|+.|+|=+|-+.+..+....+.
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~ 64 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGR 64 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCS
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCC
Confidence 355666666666666666666666655433
No 284
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=85.61 E-value=4.1 Score=27.96 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
|..+..+|..+-..|+|++|+.+|..+++.
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 345667777777888888888888777764
No 285
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=82.71 E-value=6.2 Score=27.46 Aligned_cols=30 Identities=23% Similarity=0.321 Sum_probs=20.3
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
|..+..+|..+-..|+|++|+.+|..+++.
T Consensus 15 Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 15 AVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 345666677777777777777777766654
No 286
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=81.39 E-value=2.9 Score=40.06 Aligned_cols=53 Identities=26% Similarity=0.172 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHH
Q 023550 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYE 87 (281)
Q Consensus 35 ~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~ 87 (281)
..+....+|..++..|+|.-|.+.++.++..+|++..+...++.+|.++|.-.
T Consensus 448 g~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 448 GAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 35677888888888999999999999999999999999999999999988643
No 287
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=80.39 E-value=3.5 Score=37.17 Aligned_cols=64 Identities=11% Similarity=0.038 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC---CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023550 36 AELFADRAQASIKLQNFTEAVADANRAIELEP---SMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p---~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l 99 (281)
..++..+|..|+..|++++|+..|.++..... .-.+.++....++...++|..+...+.++..+
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 45788999999999999999999999887543 34678888899999999999999999998765
No 288
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=79.91 E-value=13 Score=35.23 Aligned_cols=79 Identities=14% Similarity=0.006 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023550 19 ELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 19 ~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
.++...+.+..... .+....-.++...++.|++..|...+.+.-.-........|-+|.++..+|+.++|...|+++..
T Consensus 269 ~~~~~~~~~~~~~~-~~~~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 269 DEQAKWRDDAIMRS-QSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHhccccC-CChHHHHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 34444555443322 22222333344445667777777777654433334566677777777777777777777777764
No 289
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=79.90 E-value=27 Score=30.34 Aligned_cols=27 Identities=19% Similarity=0.097 Sum_probs=23.5
Q ss_pred CcHHHHHHHHHHHHHhhcHHHHHHHHH
Q 023550 68 SMSKAYWRKATACMKLEEYETAKVALE 94 (281)
Q Consensus 68 ~~~~a~~~~g~~~~~~g~~~~A~~~~~ 94 (281)
.++..+..+|..|...++|.+|..+|-
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~i 160 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHLV 160 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 467888999999999999999988873
No 290
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=79.75 E-value=2.2 Score=31.25 Aligned_cols=13 Identities=38% Similarity=0.432 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHh
Q 023550 18 FELAYDLYSQAIE 30 (281)
Q Consensus 18 y~~Al~~y~~al~ 30 (281)
++.|+.+..+|+.
T Consensus 15 l~kAi~lv~~Ave 27 (117)
T 2cpt_A 15 LQKAIDLASKAAQ 27 (117)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3456666666553
No 291
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=79.74 E-value=9.4 Score=25.88 Aligned_cols=29 Identities=24% Similarity=0.351 Sum_probs=19.5
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
..+..+|...-..|+|++|+.+|..+++.
T Consensus 14 ~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 14 IELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34566666666777777777777776653
No 292
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=79.65 E-value=6.6 Score=37.27 Aligned_cols=115 Identities=11% Similarity=-0.087 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH-HHHHH---HHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA-ELFAD---RAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA 79 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~-~~~~~---~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 79 (281)
.+...+...+..++.+.|...|........-+. ..... +|.-+...+...++...+.+......++....++.+.+
T Consensus 216 ~~~~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~A 295 (618)
T 1qsa_A 216 QMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMA 295 (618)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHHH
Confidence 345566777777899999999988765433332 22222 22222223435677778887776555555555555555
Q ss_pred HHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 80 CMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 80 ~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
+ +.|++..|..+|.+...-.........|++++...+++
T Consensus 296 l-r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~ 334 (618)
T 1qsa_A 296 L-GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGR 334 (618)
T ss_dssp H-HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTC
T ss_pred H-HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCC
Confidence 4 67999999999988766444556678899888665543
No 293
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=79.53 E-value=4 Score=27.14 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=22.5
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHH
Q 023550 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSAEL 38 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~ 38 (281)
...|..+..+|++++|+.+|.+|+...|+-..+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 456777777777777777777777776665443
No 294
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=77.79 E-value=6 Score=26.30 Aligned_cols=37 Identities=8% Similarity=0.164 Sum_probs=26.8
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHH
Q 023550 74 WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLI 110 (281)
Q Consensus 74 ~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l 110 (281)
..+|..+...|++++|..+|.+|+...|.-..+...+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~ 57 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 57 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3467778888888888888888888887766554433
No 295
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=76.44 E-value=33 Score=29.48 Aligned_cols=28 Identities=4% Similarity=-0.255 Sum_probs=24.2
Q ss_pred CcHHHHHHHHHHHHHhhcHHHHHHHHHH
Q 023550 68 SMSKAYWRKATACMKLEEYETAKVALEK 95 (281)
Q Consensus 68 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~ 95 (281)
.++..|..+|..|...|++.+|..+|-.
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i~ 159 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFML 159 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHHh
Confidence 3678899999999999999999998853
No 296
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=76.12 E-value=16 Score=31.62 Aligned_cols=101 Identities=14% Similarity=0.101 Sum_probs=59.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCC----CC----HHH--HHHHHHHHHHccCHHHHHH-----HHHHHHH-----
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISP----NS----AEL--FADRAQASIKLQNFTEAVA-----DANRAIE----- 64 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p----~~----~~~--~~~~a~~~~~l~~~~~A~~-----~~~~al~----- 64 (281)
.++.|..++..|++++|+..|+.+|..-+ ++ .++ ++..+.-|+..=+.+.+.. +..|.++
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYF 196 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYF 196 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh
Confidence 46789999999999999999999987632 11 111 2223222222111111111 1122222
Q ss_pred ----cCCCcHHHHHHHH-HHHHHhhcHHHHHHHHHHhhhcCCCChh
Q 023550 65 ----LEPSMSKAYWRKA-TACMKLEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 65 ----l~p~~~~a~~~~g-~~~~~~g~~~~A~~~~~~a~~l~p~~~~ 105 (281)
+.|.....-++.| ...++.++|..|....++.+++.|....
T Consensus 197 T~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~ 242 (325)
T 3mv2_A 197 TKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPR 242 (325)
T ss_dssp GGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHH
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHH
Confidence 2332222223333 4567889999999999999999997543
No 297
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=74.62 E-value=6.4 Score=35.88 Aligned_cols=88 Identities=5% Similarity=-0.080 Sum_probs=63.1
Q ss_pred cCHHHHHHHHHHHHhcCCCC------------H----HHHHHHHHHHHHccCHHHHHHHHHHHHHcCC----------Cc
Q 023550 16 DYFELAYDLYSQAIEISPNS------------A----ELFADRAQASIKLQNFTEAVADANRAIELEP----------SM 69 (281)
Q Consensus 16 ~~y~~Al~~y~~al~~~p~~------------~----~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p----------~~ 69 (281)
...++|.....++....-++ - -+..++-.+|.++++...|...++..-.... ..
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccce
Confidence 34677778888877662111 1 1123456788899999888887764433222 12
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhc-CCCC
Q 023550 70 SKAYWRKATACMKLEEYETAKVALEKGASL-APGD 103 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l-~p~~ 103 (281)
...+|.+|..++..++|.+|..++.+|++. .|.+
T Consensus 220 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 220 IEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 567888999999999999999999999999 8765
No 298
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=74.60 E-value=20 Score=25.47 Aligned_cols=72 Identities=18% Similarity=0.099 Sum_probs=33.9
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 42 RAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 42 ~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
+|.+-...+..++|...++ .+...+..--+-.-+...+...|+|++|....+..- -+++.-|++-|..+++-
T Consensus 13 ~AL~gTG~H~HqEA~tIAd-wL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl 84 (116)
T 2p58_C 13 IALIGTGNHYHEEANCIAE-WLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCEYRLGL 84 (116)
T ss_dssp HHHHHHTTTCHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHHHHHTC
T ss_pred HHHHHccchHHHHHHHHHH-HHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhccc
Confidence 3344444455555544333 233333333344445556666666666654433211 34455555555554443
No 299
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=73.21 E-value=6.4 Score=27.19 Aligned_cols=30 Identities=20% Similarity=0.347 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEIS 32 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~ 32 (281)
+.++..|..+|+.++|.+|+.+|+++....
T Consensus 54 r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 54 RSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 345667777777777777777777776553
No 300
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=72.54 E-value=8.7 Score=26.77 Aligned_cols=29 Identities=0% Similarity=-0.135 Sum_probs=22.9
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 023550 6 EKKAKEAFIDDYFELAYDLYSQAIEISPN 34 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~p~ 34 (281)
+..|..+|+.|+|=+|-+.++.+....+.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~ 33 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATG 33 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCC
Confidence 56788888888888888888888777644
No 301
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=71.34 E-value=7.8 Score=35.89 Aligned_cols=60 Identities=17% Similarity=0.141 Sum_probs=49.1
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC
Q 023550 7 KKAKEAFIDDYFELAYDLYSQAIEISPNS-------AELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (281)
Q Consensus 7 ~~g~~~~~~~~y~~Al~~y~~al~~~p~~-------~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~ 68 (281)
..-..|...+.|+.|..+.+++. .|.+ ..+++..|.++.-.++|.+|.+++..|++..|.
T Consensus 236 llLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~ 302 (523)
T 4b4t_S 236 LILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPH 302 (523)
T ss_dssp HHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSC
T ss_pred HHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 34556778889999999999985 3322 577888999999999999999999999988764
No 302
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=70.23 E-value=31 Score=26.53 Aligned_cols=86 Identities=12% Similarity=0.114 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHccCHHH-HHHHHHHHHHcCCCcHHHHHHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS--AELFADRAQASIKLQNFTE-AVADANRAIELEPSMSKAYWRKATAC 80 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~--~~~~~~~a~~~~~l~~~~~-A~~~~~~al~l~p~~~~a~~~~g~~~ 80 (281)
..+..++.+|-..+|.+.+..+.. .+|.. ....+.+|..|++..++.+ ..+.....+.+.. .-.+.+-++|
T Consensus 10 ~a~i~a~~afl~~dYs~VI~~L~~---~~~~~Lp~~~kY~LA~SYI~~e~Ls~eQKenIln~itlkS---de~yL~YWIy 83 (161)
T 2ynq_A 10 EAYIQSTELFLQNKYSDVITTLED---YAPEDMPYVIQYELASSYVMTESLTEEQRQTVSNNITLKT---DEQYMLYWIY 83 (161)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHTT---SCGGGSCHHHHHHHHHHHHHTSSSCHHHHHHHHHTCCTTS---CHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhc---CChhhCChhHHHHHHHHHHHccCCCHHHHHHHHhhCCccC---CHHHHHHHHH
Confidence 346678999999999999988866 44443 5778889999999877653 2222222233322 3345556777
Q ss_pred HHhhcHHHHHHHHHH
Q 023550 81 MKLEEYETAKVALEK 95 (281)
Q Consensus 81 ~~~g~~~~A~~~~~~ 95 (281)
..+|++++|+..-++
T Consensus 84 iGRg~~~eAlDiA~~ 98 (161)
T 2ynq_A 84 IGRSQSEEALELART 98 (161)
T ss_dssp HHHTCHHHHHHHHHH
T ss_pred HcCCchHHHHHHHHh
Confidence 888999999875443
No 303
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=69.41 E-value=15 Score=36.76 Aligned_cols=52 Identities=15% Similarity=0.117 Sum_probs=41.2
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhh
Q 023550 42 RAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGA 97 (281)
Q Consensus 42 ~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~ 97 (281)
++..++..|.++-|. ..+...|.++-.-|.+|.+|..+|++++|..+|++|-
T Consensus 816 l~~~L~~~~~~~~a~----eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 816 LVEKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHTTCHHHHH----HHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHhcHHHHHH----HHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 455666777777543 4566777887788999999999999999999999875
No 304
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=69.08 E-value=56 Score=28.15 Aligned_cols=114 Identities=16% Similarity=0.142 Sum_probs=65.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCC----CCH----HH--HHHHHHHHHHccCHHHHH--------HHHHHHHH--
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISP----NSA----EL--FADRAQASIKLQNFTEAV--------ADANRAIE-- 64 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p----~~~----~~--~~~~a~~~~~l~~~~~A~--------~~~~~al~-- 64 (281)
.++.|..++..|++++|+..|+.+|..-| ++. ++ ++..+.-|+..=+.+.+. ++..+.++
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 46789999999999999999999988743 221 11 222222222211111111 12233333
Q ss_pred -------cCCCcHHHHHHHH-HHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHh
Q 023550 65 -------LEPSMSKAYWRKA-TACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (281)
Q Consensus 65 -------l~p~~~~a~~~~g-~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (281)
+.|.+.-.-++.| ...++.++|..|...-++.+++.|... ......++.....+
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~-~~~qArkil~~ce~ 246 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPE-VAQQTRKILSACEK 246 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHH-HHHHHHHHHHHHHH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHhc
Confidence 2333322223333 456788999999999999999988633 33334444433333
No 305
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=68.84 E-value=12 Score=29.94 Aligned_cols=49 Identities=18% Similarity=0.104 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHH-----HHHHHHHHHccCHH
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELF-----ADRAQASIKLQNFT 53 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~-----~~~a~~~~~l~~~~ 53 (281)
.+-.|..++.+++|.+|.+.+..|+...|.+.... ..+--+.+.+|++.
T Consensus 17 ~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 17 KYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 56689999999999999999999999877664322 22333334557654
No 306
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=67.71 E-value=8.9 Score=26.66 Aligned_cols=28 Identities=21% Similarity=0.260 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 023550 36 AELFADRAQASIKLQNFTEAVADANRAI 63 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al 63 (281)
+-.+-.+|..+++.|+|++|+++..+|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 3456678888888888888888777665
No 307
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.62 E-value=33 Score=34.92 Aligned_cols=90 Identities=12% Similarity=0.004 Sum_probs=63.5
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH-c--C-------------------
Q 023550 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE-L--E------------------- 66 (281)
Q Consensus 9 g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~-l--~------------------- 66 (281)
...+...+.|+-|.+ .+...+.++...+.+|.+++..|++++|.++|.+|-. + +
T Consensus 819 ~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~ 894 (1139)
T 4fhn_B 819 VEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHH 894 (1139)
T ss_dssp HHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTS
T ss_pred HHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccc
Confidence 344566667665544 2344567777778999999999999999999988642 1 1
Q ss_pred -CCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCC
Q 023550 67 -PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (281)
Q Consensus 67 -p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~ 102 (281)
......|+.....+.+.|.++.++..-+.|++..+.
T Consensus 895 ~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~ 931 (1139)
T 4fhn_B 895 QNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKET 931 (1139)
T ss_dssp CCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCS
T ss_pred cccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccC
Confidence 112344555666777888999999998888876543
No 308
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=66.91 E-value=26 Score=34.94 Aligned_cols=23 Identities=13% Similarity=-0.128 Sum_probs=14.1
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHH
Q 023550 6 EKKAKEAFIDDYFELAYDLYSQA 28 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~a 28 (281)
|-+|..+...|++++|..+|.+|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kA 866 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTT 866 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 44566666666666666666554
No 309
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=66.58 E-value=22 Score=25.24 Aligned_cols=19 Identities=16% Similarity=0.148 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHhhcHHHHH
Q 023550 72 AYWRKATACMKLEEYETAK 90 (281)
Q Consensus 72 a~~~~g~~~~~~g~~~~A~ 90 (281)
+-.-+...+...|+|++|.
T Consensus 41 v~lIR~sSLmNrG~Yq~Al 59 (115)
T 2uwj_G 41 ARLIRISSLANQGRYQEAL 59 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHcchhHHHHH
Confidence 3334444555555555554
No 310
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=66.10 E-value=8.4 Score=26.78 Aligned_cols=28 Identities=21% Similarity=0.236 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhh
Q 023550 70 SKAYWRKATACMKLEEYETAKVALEKGA 97 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~ 97 (281)
+-.+-+++..+...|+|++|+.|.+++.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4567789999999999999998777664
No 311
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=64.99 E-value=6.2 Score=26.58 Aligned_cols=27 Identities=19% Similarity=0.170 Sum_probs=21.2
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
....|+.+...|+|+.|+.+|+.++.+
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 456788888888888888888887765
No 312
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=63.89 E-value=16 Score=34.81 Aligned_cols=52 Identities=13% Similarity=0.127 Sum_probs=46.2
Q ss_pred cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 69 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 69 ~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
-....+.+|...+..|+|.-|......++..+|+|..++..++.+..+++..
T Consensus 448 g~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 448 GAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 3456778888889999999999999999999999999999999999999877
No 313
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=63.19 E-value=7.3 Score=27.28 Aligned_cols=29 Identities=17% Similarity=0.231 Sum_probs=19.3
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 023550 6 EKKAKEAFIDDYFELAYDLYSQAIEISPN 34 (281)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~al~~~p~ 34 (281)
...|..+...|+++.|+.+|.+|+...|+
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 34566777777777777777666666554
No 314
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=62.22 E-value=26 Score=23.43 Aligned_cols=26 Identities=19% Similarity=0.135 Sum_probs=17.9
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023550 73 YWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 73 ~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
...+|+-|..+|+|+.|+.+|+.++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 45567777777777777777776654
No 315
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=60.84 E-value=10 Score=26.52 Aligned_cols=31 Identities=10% Similarity=0.150 Sum_probs=20.6
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhhhcCCCChh
Q 023550 75 RKATACMKLEEYETAKVALEKGASLAPGDSR 105 (281)
Q Consensus 75 ~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~ 105 (281)
.+|..+...|+++.|+.+|.+|+...|.-..
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~ 55 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQ 55 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHH
Confidence 3566666777777777777777777665443
No 316
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=63.70 E-value=2 Score=41.33 Aligned_cols=54 Identities=20% Similarity=0.153 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHH
Q 023550 36 AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETA 89 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A 89 (281)
.+..+.+|..++..|+|.-|.+.++.++..+|++..+...++.+|.++|.-.+.
T Consensus 461 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 461 ADAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 345667777777888888888888888888888888888888888888865443
No 317
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=58.66 E-value=63 Score=25.82 Aligned_cols=51 Identities=24% Similarity=0.175 Sum_probs=42.5
Q ss_pred CHHHHHHHHHHHHH--cCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCC
Q 023550 51 NFTEAVADANRAIE--LEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (281)
Q Consensus 51 ~~~~A~~~~~~al~--l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p 101 (281)
+..++...|..... ++-..+..|-..|..+...|+|.+|...|+.+++..-
T Consensus 94 ~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 94 NFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp CHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred ccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 36688888877665 5567788888899999999999999999999998763
No 318
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=58.56 E-value=53 Score=25.23 Aligned_cols=60 Identities=7% Similarity=-0.078 Sum_probs=44.9
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHcCCCc------HHHHHH-HH--HHHHHhhcHHHHHHHHHHhhh
Q 023550 39 FADRAQASIKLQNFTEAVADANRAIELEPSM------SKAYWR-KA--TACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 39 ~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~------~~a~~~-~g--~~~~~~g~~~~A~~~~~~a~~ 98 (281)
-+..+..++..|+|-+|-+.++.+....+.. ..++.+ ++ ..+.+.|+...|...+.+++.
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3556677778899999999999999876543 334444 44 444557999999999999976
No 319
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.55 E-value=28 Score=25.22 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCC
Q 023550 51 NFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (281)
Q Consensus 51 ~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p 101 (281)
.|.+|..+..++|.++.. |.-...+.-|.+++..|.+++.+..
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~ 60 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISS 60 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccc
Confidence 466777777777766641 2233333344445555666666554
No 320
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=53.78 E-value=88 Score=25.38 Aligned_cols=49 Identities=16% Similarity=0.078 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHH--cCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCC
Q 023550 53 TEAVADANRAIE--LEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (281)
Q Consensus 53 ~~A~~~~~~al~--l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p 101 (281)
.++...|..... ++-..+..|-..|..+...|+|.+|...|+.+++..-
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A 181 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKA 181 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 345555655554 4566788888899999999999999999999998763
No 321
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=53.21 E-value=49 Score=22.26 Aligned_cols=14 Identities=29% Similarity=0.119 Sum_probs=6.1
Q ss_pred HHHHHhhhcCCCCh
Q 023550 91 VALEKGASLAPGDS 104 (281)
Q Consensus 91 ~~~~~a~~l~p~~~ 104 (281)
+.|..++...|+..
T Consensus 47 e~l~~alk~e~d~~ 60 (83)
T 2w2u_A 47 EVLAQLVSLYRDGS 60 (83)
T ss_dssp HHHHHHHHHSTTSS
T ss_pred HHHHHHHHHCCCHH
Confidence 33344444455443
No 322
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=52.91 E-value=26 Score=27.93 Aligned_cols=36 Identities=14% Similarity=-0.033 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHH
Q 023550 36 AELFADRAQASIKLQNFTEAVADANRAIELEPSMSK 71 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~ 71 (281)
..+++.+|..++..++|.+|.+++..|++..|....
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~ 49 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQ 49 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHH
Confidence 567889999999999999999999999999886543
No 323
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=48.67 E-value=60 Score=21.95 Aligned_cols=22 Identities=18% Similarity=0.137 Sum_probs=8.9
Q ss_pred HHHHHHHccCHHHHHHHHHHHH
Q 023550 42 RAQASIKLQNFTEAVADANRAI 63 (281)
Q Consensus 42 ~a~~~~~l~~~~~A~~~~~~al 63 (281)
+|.-.-..|+|++|+..|..++
T Consensus 22 ~Ave~D~~g~y~eAl~lY~~Ai 43 (86)
T 4a5x_A 22 RAVELDSESRYPQALVCYQEGI 43 (86)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHH
Confidence 3333333444444444444333
No 324
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=48.12 E-value=48 Score=20.71 Aligned_cols=49 Identities=18% Similarity=0.125 Sum_probs=25.7
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhhcHHHHH
Q 023550 41 DRAQASIKLQNFTEAVADANRAIELEPS-MSKAYWRKATACMKLEEYETAK 90 (281)
Q Consensus 41 ~~a~~~~~l~~~~~A~~~~~~al~l~p~-~~~a~~~~g~~~~~~g~~~~A~ 90 (281)
..|..-...+..++|...++ .+...+. .--+-.-+...+...|+|++|+
T Consensus 11 e~AL~~TG~HcH~EA~tIA~-~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 11 ELALAGTGHHCHQEAASIAD-WLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHTTTCHHHHHHHHH-HHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHccchHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 34444455667888866544 4445544 3445566778888899998885
No 325
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=47.79 E-value=17 Score=25.01 Aligned_cols=37 Identities=8% Similarity=-0.021 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHH
Q 023550 18 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRA 62 (281)
Q Consensus 18 y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~a 62 (281)
++.|.+.++-+ ..|+.-|..+++.|++..|+.++.=+
T Consensus 29 ~~~a~~~l~mA--------~~Y~~Da~~fl~kGD~v~Ala~isYa 65 (87)
T 2pmr_A 29 SDDEEAVVERA--------LNYRDDSVYYLEKGDHITSFGCITYA 65 (87)
T ss_dssp CHHHHHHHHHH--------HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHH--------HHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 44566666663 34566666677777777776665543
No 326
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=46.95 E-value=17 Score=24.84 Aligned_cols=24 Identities=4% Similarity=-0.024 Sum_probs=11.7
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHH
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLY 25 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y 25 (281)
|..++..|..++..||+..|+..+
T Consensus 35 A~~Y~~Da~~fl~kGD~v~Ala~i 58 (86)
T 2oo2_A 35 IEAYISDSRYFLEKGDLVRAFECV 58 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHH
Confidence 444444455555555555544443
No 327
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=45.74 E-value=29 Score=31.48 Aligned_cols=60 Identities=12% Similarity=-0.034 Sum_probs=40.9
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCC----------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHc-CCC
Q 023550 9 AKEAFIDDYFELAYDLYSQAIEISP----------NSAELFADRAQASIKLQNFTEAVADANRAIEL-EPS 68 (281)
Q Consensus 9 g~~~~~~~~y~~Al~~y~~al~~~p----------~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-~p~ 68 (281)
-..||+.++..-|-..+...-.... +-..+++..|..+...++|.+|.+++..|++. .|.
T Consensus 183 ~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~ 253 (455)
T 3t5v_B 183 NNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNL 253 (455)
T ss_dssp HHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCc
Confidence 3567777777776666654322211 11567788888888888888888888888887 554
No 328
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=45.01 E-value=67 Score=21.47 Aligned_cols=27 Identities=22% Similarity=0.059 Sum_probs=12.2
Q ss_pred HHHHHHHhhhcCCCChhHHHHHHHHHH
Q 023550 89 AKVALEKGASLAPGDSRFTNLIKECEE 115 (281)
Q Consensus 89 A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (281)
|++.|..++...|+...-.....++..
T Consensus 37 aie~l~~~lk~e~d~~~k~~ir~K~~e 63 (83)
T 2v6y_A 37 AIEVLSQIIVLYPESVARTAYEQMINE 63 (83)
T ss_dssp HHHHHHHHHHHCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 444444555556654432333334433
No 329
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=43.61 E-value=26 Score=30.91 Aligned_cols=25 Identities=12% Similarity=0.070 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHh
Q 023550 72 AYWRKATACMKLEEYETAKVALEKG 96 (281)
Q Consensus 72 a~~~~g~~~~~~g~~~~A~~~~~~a 96 (281)
.|..+|..+++.+++.+|+.++..+
T Consensus 298 PYtylgGy~yR~~~~reAl~~WA~A 322 (472)
T 3re2_A 298 PYTYLGGYYYRKKKYYEAIASWVDA 322 (472)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred chhhhhhhhhhcchHHHHHHHHHHH
Confidence 4555555666666666666666554
No 330
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=42.92 E-value=1.7e+02 Score=25.58 Aligned_cols=87 Identities=6% Similarity=-0.089 Sum_probs=59.0
Q ss_pred HHHhcCHHHHHHHHHHHHhcC-------C--------CC--HHHHHHHHHHHHHccCHHHHHHHHHHHHHc-------CC
Q 023550 12 AFIDDYFELAYDLYSQAIEIS-------P--------NS--AELFADRAQASIKLQNFTEAVADANRAIEL-------EP 67 (281)
Q Consensus 12 ~~~~~~y~~Al~~y~~al~~~-------p--------~~--~~~~~~~a~~~~~l~~~~~A~~~~~~al~l-------~p 67 (281)
.-...+.++|++.+.+....- . .. ..+....+..|+..|+..+|...++++-.. ++
T Consensus 86 ~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~ 165 (393)
T 4b4t_O 86 LKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPL 165 (393)
T ss_dssp HHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSS
T ss_pred HhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccH
Confidence 345678899999998764321 0 11 344567888899999999999988887642 12
Q ss_pred C-cHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023550 68 S-MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 68 ~-~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
. ....+...+..|...++|..+...+-.++.
T Consensus 166 ~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 166 RITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 1 244445566667777888888777766664
No 331
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=41.29 E-value=46 Score=29.95 Aligned_cols=43 Identities=16% Similarity=0.120 Sum_probs=30.0
Q ss_pred HHHHHHHHHhc-----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 023550 21 AYDLYSQAIEI-----SPNSAELFADRAQASIKLQNFTEAVADANRAI 63 (281)
Q Consensus 21 Al~~y~~al~~-----~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al 63 (281)
++.+|.+++.. ..++.--|..+|.+|++.++|.+|+..+..|-
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa 345 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTA 345 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHH
Confidence 56667666654 33445567778888888888888888766554
No 332
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=40.77 E-value=1.1e+02 Score=31.19 Aligned_cols=67 Identities=6% Similarity=-0.141 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHH-----cCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc--CCCCh
Q 023550 37 ELFADRAQASIKLQNFTEAVADANRAIE-----LEPSMSKAYWRKATACMKLEEYETAKVALEKGASL--APGDS 104 (281)
Q Consensus 37 ~~~~~~a~~~~~l~~~~~A~~~~~~al~-----l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l--~p~~~ 104 (281)
..|..+-.+|.+.|+.++|...+....+ ..| +...|-.+-..|.+.|+.++|...|.+..+. .|+..
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvv 201 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLL 201 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHH
Confidence 3467788899999999999999976543 234 5568888889999999999999999988764 45433
No 333
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=40.45 E-value=86 Score=21.43 Aligned_cols=11 Identities=9% Similarity=-0.227 Sum_probs=4.3
Q ss_pred HHHHhhhcCCC
Q 023550 92 ALEKGASLAPG 102 (281)
Q Consensus 92 ~~~~a~~l~p~ 102 (281)
.|..++...++
T Consensus 44 ~l~~alk~e~~ 54 (93)
T 1wfd_A 44 MLLQVLKGTKE 54 (93)
T ss_dssp HHHHHHHTCCC
T ss_pred HHHHHHHHCCC
Confidence 33333444443
No 334
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=40.15 E-value=1.2e+02 Score=23.01 Aligned_cols=64 Identities=14% Similarity=0.064 Sum_probs=49.6
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC
Q 023550 4 DLEKKAKEAF-IDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP 67 (281)
Q Consensus 4 ~~~~~g~~~~-~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p 67 (281)
.+++.|..+. .+|.-++--+.+...+..++-++.+++.+|.+|-++|+-.+|-+.+.+|.+.+-
T Consensus 92 e~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG~ 156 (172)
T 1wy6_A 92 EHVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKGE 156 (172)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhhh
Confidence 4566665544 566767766777776676777899999999999999999999999999988764
No 335
>3dza_A Uncharacterized putative membrane protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=40.13 E-value=71 Score=25.27 Aligned_cols=61 Identities=20% Similarity=0.065 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHh-cC------CC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQAIE-IS------PN-SAELFADRAQASIKLQNFTEAVADANRAIE 64 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~al~-~~------p~-~~~~~~~~a~~~~~l~~~~~A~~~~~~al~ 64 (281)
..+..++.+++.|+-+.|++.+.-+=. .+ |= ...-...+|..++..|+|.+|-..++.+..
T Consensus 110 aAI~~AN~~Lk~Gd~~~A~~~LklAgvdv~~~~allPL~qT~~~V~~A~~ll~~gk~yeAn~aLk~Aed 178 (191)
T 3dza_A 110 SAIQSANEKLAKGDQKGAIDTLRLAGIGVIENQYLMPLNQTRKAVAQSQELLKAGKYYEANLVLKGAEE 178 (191)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTTCEEEEEEEEEEHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHcCCchhhhhhhCChHhHHHHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 457788899999999998888766421 11 10 134467788888888888888877777653
No 336
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=40.10 E-value=65 Score=28.90 Aligned_cols=47 Identities=11% Similarity=-0.014 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHcCCC--------cHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023550 52 FTEAVADANRAIELEPS--------MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p~--------~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
|+..+.+++.|+.+-|. -..++..+|.+|+..|+|++|..+.+.++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 45567788888876442 356888999999999999999999988875
No 337
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=38.81 E-value=70 Score=28.74 Aligned_cols=47 Identities=21% Similarity=0.196 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHcCCC--------cHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023550 52 FTEAVADANRAIELEPS--------MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p~--------~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
|+..+.+++.|+.+-|. -..++..+|.+|+..|+|++|..+.+.++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 45567788888775442 366888999999999999999999988875
No 338
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=37.75 E-value=45 Score=24.08 Aligned_cols=9 Identities=33% Similarity=0.401 Sum_probs=3.5
Q ss_pred HHHHHHHHH
Q 023550 54 EAVADANRA 62 (281)
Q Consensus 54 ~A~~~~~~a 62 (281)
.|+..+.+|
T Consensus 17 kAi~lv~~A 25 (117)
T 2cpt_A 17 KAIDLASKA 25 (117)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 339
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=36.99 E-value=1.1e+02 Score=26.06 Aligned_cols=64 Identities=9% Similarity=-0.007 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHH----------------Hc---CCCcHHHHHHHHH-HHHHhhcHHHHHHHH
Q 023550 34 NSAELFADRAQASIKLQNFTEAVADANRAI----------------EL---EPSMSKAYWRKAT-ACMKLEEYETAKVAL 93 (281)
Q Consensus 34 ~~~~~~~~~a~~~~~l~~~~~A~~~~~~al----------------~l---~p~~~~a~~~~g~-~~~~~g~~~~A~~~~ 93 (281)
.++.++..+|..|.+-+++.+|..++-..- .. .|.....+..+|+ .|..+|+...|...|
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~ 211 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHESK 211 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 468889999999999999999888663211 11 1223444444543 456778888888777
Q ss_pred HHhh
Q 023550 94 EKGA 97 (281)
Q Consensus 94 ~~a~ 97 (281)
....
T Consensus 212 ~~f~ 215 (312)
T 2wpv_A 212 DIFL 215 (312)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 340
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=36.59 E-value=7.4 Score=32.55 Aligned_cols=27 Identities=22% Similarity=0.295 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023550 5 LEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 5 ~~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
+..+|..+-+.|+|++|+.+|..+++.
T Consensus 26 lv~~AVe~D~~g~y~eAl~lY~eaIe~ 52 (257)
T 2ymb_A 26 VLKRAVELDSESRYPQALVCYQEGIDL 52 (257)
T ss_dssp ---------------------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 444555555555555555555555543
No 341
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=36.28 E-value=78 Score=28.50 Aligned_cols=48 Identities=17% Similarity=0.101 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHcCCC--------cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023550 52 FTEAVADANRAIELEPS--------MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p~--------~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l 99 (281)
|+..+.+++.|+.+-|. -..|+..+|.+|+..|+|++|..+.+.++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 55667888888876543 3568889999999999999999999988764
No 342
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=36.18 E-value=90 Score=27.94 Aligned_cols=30 Identities=17% Similarity=-0.054 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Q 023550 36 AELFADRAQASIKLQNFTEAVADANRAIEL 65 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l 65 (281)
..++..+|.+|+-+++|++|++.++.++..
T Consensus 190 ~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 190 YAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 467888999999999999999999999853
No 343
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=36.09 E-value=43 Score=25.23 Aligned_cols=30 Identities=20% Similarity=0.259 Sum_probs=23.9
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
|..++..|..|...|+++.|.-+|-+.+.+
T Consensus 40 a~~llr~A~~y~~egd~e~AYily~R~~~L 69 (146)
T 2xze_A 40 GVEIIRMASIYSEEGNIEHAFILYNKYITL 69 (146)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 456788888899999999998888886443
No 344
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=36.06 E-value=1e+02 Score=21.14 Aligned_cols=48 Identities=17% Similarity=0.382 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCC--hh-HHHHHHHHHHHH
Q 023550 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGD--SR-FTNLIKECEERI 117 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~--~~-~~~~l~~~~~~l 117 (281)
+......|.-+++.++|.+|...|+++..+..+. .. +...+..|...+
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~kkl 103 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECRKKL 103 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHh
Confidence 3444555666777777777777777776544321 11 124455555444
No 345
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=35.51 E-value=1.3e+02 Score=27.00 Aligned_cols=57 Identities=16% Similarity=0.082 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhh------cCCCChhHHHHH
Q 023550 52 FTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGAS------LAPGDSRFTNLI 110 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~------l~p~~~~~~~~l 110 (281)
|.+|+...++..... ..-.|..+|-.+++.++|.+|+.++..+-. ...+|.++...+
T Consensus 287 f~~AI~~ar~~Y~~~--hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~ 349 (489)
T 4gq4_A 287 YHKGIASAKTYYRDE--HIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEF 349 (489)
T ss_dssp HHHHHHHHHHHSTTC--CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHH
T ss_pred HHHHHHHHHHhcccC--cccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHH
Confidence 344444444333222 344677778888888999999988887643 234455554443
No 346
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=35.15 E-value=98 Score=20.55 Aligned_cols=11 Identities=36% Similarity=0.392 Sum_probs=4.2
Q ss_pred hcHHHHHHHHH
Q 023550 84 EEYETAKVALE 94 (281)
Q Consensus 84 g~~~~A~~~~~ 94 (281)
|+|++|+.+|.
T Consensus 27 g~y~eAl~~Y~ 37 (85)
T 2v6x_A 27 TQYEEAYTAYY 37 (85)
T ss_dssp TCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 33333333333
No 347
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=34.52 E-value=1.2e+02 Score=24.71 Aligned_cols=13 Identities=23% Similarity=0.028 Sum_probs=5.4
Q ss_pred cCHHHHHHHHHHH
Q 023550 50 QNFTEAVADANRA 62 (281)
Q Consensus 50 ~~~~~A~~~~~~a 62 (281)
++.++|...+++|
T Consensus 187 ~~~~~A~~lAk~a 199 (234)
T 2br9_A 187 NSPDRACRLAKAA 199 (234)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 4444444443333
No 348
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=34.40 E-value=16 Score=26.43 Aligned_cols=23 Identities=13% Similarity=0.251 Sum_probs=18.6
Q ss_pred ccCcceEEEeCcEEEEEEeecCC
Q 023550 231 IPAKCRYEVLSTKVEIRLAKAEP 253 (281)
Q Consensus 231 ~p~~s~~~v~~~kiei~L~K~~~ 253 (281)
.|+..+.++.+.+|.|++.|+..
T Consensus 78 lp~~v~v~v~P~~V~V~i~~~~~ 100 (119)
T 2kq1_A 78 FPGDLAVTVEPRMARVQLEERQT 100 (119)
T ss_dssp SCTTSEEEESCCEEEEEEESCCC
T ss_pred CCCCeEEEEcCCEEEEEEEEEEE
Confidence 36666689999999999998653
No 349
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=34.35 E-value=1e+02 Score=27.87 Aligned_cols=47 Identities=13% Similarity=0.002 Sum_probs=37.4
Q ss_pred HH-HHHHHHHHHHHc-CC--------CcHHHHHHHHHHHHHhh---------cHHHHHHHHHHhhh
Q 023550 52 FT-EAVADANRAIEL-EP--------SMSKAYWRKATACMKLE---------EYETAKVALEKGAS 98 (281)
Q Consensus 52 ~~-~A~~~~~~al~l-~p--------~~~~a~~~~g~~~~~~g---------~~~~A~~~~~~a~~ 98 (281)
|+ ..+.+++.|+.. -| +-..|+..+|.+|+..+ +|++|..+.+.++.
T Consensus 160 y~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~ 225 (482)
T 3otn_A 160 YDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIK 225 (482)
T ss_dssp HHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHc
Confidence 55 577788888876 33 23668888999999988 99999999998875
No 350
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=33.28 E-value=1.4e+02 Score=27.31 Aligned_cols=47 Identities=15% Similarity=0.138 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHcCCC-------------cHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023550 52 FTEAVADANRAIELEPS-------------MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p~-------------~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
|+..+.+++.|+..-|. -..|+..+|.+|+..++|++|..+.+.++.
T Consensus 167 ~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 167 LKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp HHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 44557777778775551 245888899999999999999999998875
No 351
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=33.14 E-value=93 Score=28.23 Aligned_cols=48 Identities=23% Similarity=0.326 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHcCCC-----------cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023550 52 FTEAVADANRAIELEPS-----------MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p~-----------~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l 99 (281)
|+..+.+++.|+.+-|. -..|+..+|.+|+..|+|++|..+.++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 44567777777765442 2568888999999999999999999998864
No 352
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=32.67 E-value=1e+02 Score=27.55 Aligned_cols=30 Identities=17% Similarity=0.094 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Q 023550 36 AELFADRAQASIKLQNFTEAVADANRAIEL 65 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l 65 (281)
..++..+|.+|+-+++|++|+..++.++..
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 567888999999999999999999999863
No 353
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=32.40 E-value=1.1e+02 Score=27.49 Aligned_cols=49 Identities=14% Similarity=0.075 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHhcCCC--------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Q 023550 18 FELAYDLYSQAIEISPN--------SAELFADRAQASIKLQNFTEAVADANRAIELE 66 (281)
Q Consensus 18 y~~Al~~y~~al~~~p~--------~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~ 66 (281)
|+.-+.-++.|+..-|. -..++..+|.+|+-+++|++|++.++.++...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 44455556666554332 24678889999999999999999999999754
No 354
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=32.35 E-value=3.7e+02 Score=28.00 Aligned_cols=46 Identities=11% Similarity=0.097 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIK 48 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~ 48 (281)
+.+++.=...+..-+-+++-++|++.+...|++..++..+-..+..
T Consensus 1108 e~~rd~~~~~~~k~~~~~~~~~~~~l~~~~P~~l~~~~~~l~~l~~ 1153 (1354)
T 3lxu_X 1108 ESFRDFQCSQIVKCELEMAEKIYNDVVAAHPKHLQANLLLIQNIES 1153 (1354)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcChHHHHHHHHHHHHHCCccHHHHHHHHHhhhh
Confidence 3444444445555566888899999999999998888887776653
No 355
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=31.69 E-value=1.9e+02 Score=22.92 Aligned_cols=52 Identities=12% Similarity=0.038 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc
Q 023550 18 FELAYDLYSQAIEI--SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM 69 (281)
Q Consensus 18 y~~Al~~y~~al~~--~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~ 69 (281)
..++...|.-.... .-..+.+|...|..+...|+|.+|.+.|+.+++.+-.-
T Consensus 95 ~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P 148 (202)
T 3esl_A 95 FHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRP 148 (202)
T ss_dssp HHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred cCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 55777777766554 45568899999999999999999999999999987543
No 356
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=31.16 E-value=1.3e+02 Score=27.15 Aligned_cols=30 Identities=17% Similarity=-0.010 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023550 69 MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 69 ~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
..-.|..+|..+++.++|.+|+.++..+-.
T Consensus 317 HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 317 HIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp CSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 344677888999999999999999987754
No 357
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=31.15 E-value=1.2e+02 Score=27.57 Aligned_cols=31 Identities=6% Similarity=0.159 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Q 023550 36 AELFADRAQASIKLQNFTEAVADANRAIELE 66 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~ 66 (281)
..++..+|.+|+-+++|++|+..++.++...
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 4678889999999999999999999999753
No 358
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=31.11 E-value=1.5e+02 Score=24.67 Aligned_cols=15 Identities=27% Similarity=0.242 Sum_probs=7.3
Q ss_pred ccCHHHHHHHHHHHH
Q 023550 49 LQNFTEAVADANRAI 63 (281)
Q Consensus 49 l~~~~~A~~~~~~al 63 (281)
+++.++|...+++|+
T Consensus 211 ln~~~~Ac~lAk~Af 225 (260)
T 2npm_A 211 LNEPRAAIDMAKEAF 225 (260)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 455555555444444
No 359
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=30.95 E-value=1.3e+02 Score=20.61 Aligned_cols=56 Identities=11% Similarity=-0.038 Sum_probs=38.2
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHcCCCc----HHHHHHHHHHHH--HhhcHHHHHHHHHHhhh
Q 023550 41 DRAQASIKLQNFTEAVADANRAIELEPSM----SKAYWRKATACM--KLEEYETAKVALEKGAS 98 (281)
Q Consensus 41 ~~a~~~~~l~~~~~A~~~~~~al~l~p~~----~~a~~~~g~~~~--~~g~~~~A~~~~~~a~~ 98 (281)
..|..++..|+|-+|-+.++.+-...+.. ...+..++.+++ ..|+. |...+.+++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 45667778899999999999998887543 234444444444 45666 7777777765
No 360
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=30.36 E-value=89 Score=27.59 Aligned_cols=44 Identities=20% Similarity=0.169 Sum_probs=34.2
Q ss_pred HHHHHHHHHhc-----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 023550 21 AYDLYSQAIEI-----SPNSAELFADRAQASIKLQNFTEAVADANRAIE 64 (281)
Q Consensus 21 Al~~y~~al~~-----~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~ 64 (281)
++.+|.+|+.. +.++.-.|..+|.+|++.+++.+|+..+..|-.
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 77888888765 344556678889999999999999998776543
No 361
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=30.29 E-value=87 Score=28.13 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=33.5
Q ss_pred HHHHHHHHHhc-----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 023550 21 AYDLYSQAIEI-----SPNSAELFADRAQASIKLQNFTEAVADANRAIE 64 (281)
Q Consensus 21 Al~~y~~al~~-----~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~ 64 (281)
++.+|.+|+.. ...+.-.|..+|-++++.++|.+|++.+..+-.
T Consensus 283 ~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 283 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 331 (489)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhh
Confidence 66777777764 334455677889999999999999998877653
No 362
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=30.15 E-value=65 Score=22.79 Aligned_cols=28 Identities=21% Similarity=-0.002 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAIE 30 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al~ 30 (281)
+.....|..+.+.|+|++|-+++.++-+
T Consensus 21 rS~~~eAl~~Ak~g~fe~A~~~l~eA~~ 48 (105)
T 2e2a_A 21 RSKLLEALKAAENGDFAKADSLVVEAGS 48 (105)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3455667777777888887777776543
No 363
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=30.15 E-value=4.2e+02 Score=27.59 Aligned_cols=37 Identities=11% Similarity=0.017 Sum_probs=20.6
Q ss_pred HccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhc
Q 023550 48 KLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEE 85 (281)
Q Consensus 48 ~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~ 85 (281)
.+++|..|++.+.++++-.+ ..+.+-.++.++..+|-
T Consensus 1296 ~~~~~g~~~k~l~k~~~~k~-~~~~~~~~~~~~~~l~w 1332 (1354)
T 3lxu_X 1296 AHGHYGRMYKYVVKLIEEKR-TRDHFVELAAINGALGH 1332 (1354)
T ss_dssp HHTCHHHHHHHHHHHHHHTC-CHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHcCC
Confidence 45666666666666666554 22444455555555544
No 364
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=29.53 E-value=68 Score=22.60 Aligned_cols=29 Identities=21% Similarity=0.090 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE 30 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~ 30 (281)
|+.....|..+.+.|+|++|.+++.++-+
T Consensus 18 Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~ 46 (103)
T 1wcr_A 18 ARSLAYAALKQAKQGDFAAAKAMMDQSRM 46 (103)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34456667777788888888877777543
No 365
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=29.19 E-value=3e+02 Score=24.37 Aligned_cols=61 Identities=11% Similarity=-0.049 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHc-C---CC--cHHHHHHHHHHHHHhhcHHHHHHHHHHhh
Q 023550 37 ELFADRAQASIKLQNFTEAVADANRAIEL-E---PS--MSKAYWRKATACMKLEEYETAKVALEKGA 97 (281)
Q Consensus 37 ~~~~~~a~~~~~l~~~~~A~~~~~~al~l-~---p~--~~~a~~~~g~~~~~~g~~~~A~~~~~~a~ 97 (281)
.+...+|..|...|+|.+|...+.....- . .. -.+.++.-...|...++|..|...+.++.
T Consensus 138 rl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 138 RVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34567889999999999999988876531 1 11 15677888899999999999999999874
No 366
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=29.18 E-value=1.6e+02 Score=24.36 Aligned_cols=9 Identities=22% Similarity=0.073 Sum_probs=3.8
Q ss_pred hhcHHHHHH
Q 023550 83 LEEYETAKV 91 (281)
Q Consensus 83 ~g~~~~A~~ 91 (281)
+++.++|..
T Consensus 191 ln~~~~Ac~ 199 (260)
T 1o9d_A 191 LNSPDRACN 199 (260)
T ss_dssp SCCHHHHHH
T ss_pred ccCHHHHHH
Confidence 344444443
No 367
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=29.05 E-value=1.9e+02 Score=21.86 Aligned_cols=48 Identities=15% Similarity=0.027 Sum_probs=38.5
Q ss_pred HHHHHHHHHHH--cCCCcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCC
Q 023550 54 EAVADANRAIE--LEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (281)
Q Consensus 54 ~A~~~~~~al~--l~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p 101 (281)
++.+.|..... ++-..+..|-..|..+...|++.+|...|+.+++.+-
T Consensus 83 dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A 132 (152)
T 4a1g_A 83 DLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQA 132 (152)
T ss_dssp CHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 36666666554 4556788888899999999999999999999998753
No 368
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=34.91 E-value=12 Score=35.89 Aligned_cols=51 Identities=14% Similarity=0.133 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHhh
Q 023550 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (281)
Q Consensus 70 ~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (281)
....+.+|...+..|+|.-|...+..++..+|+|..++..++.+..+++..
T Consensus 461 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~ 511 (668)
T 2yhe_A 461 ADAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQ 511 (668)
Confidence 356678888889999999999999999999999999999999999988877
No 369
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=28.68 E-value=1.7e+02 Score=24.03 Aligned_cols=10 Identities=20% Similarity=-0.124 Sum_probs=4.6
Q ss_pred hhcHHHHHHH
Q 023550 83 LEEYETAKVA 92 (281)
Q Consensus 83 ~g~~~~A~~~ 92 (281)
+++.++|...
T Consensus 187 ln~~~~Ac~l 196 (248)
T 3uzd_A 187 QNAPEQACHL 196 (248)
T ss_dssp SCCHHHHHHH
T ss_pred cCCHHHHHHH
Confidence 4455544443
No 370
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=28.43 E-value=1.8e+02 Score=24.22 Aligned_cols=13 Identities=23% Similarity=0.028 Sum_probs=5.4
Q ss_pred cCHHHHHHHHHHH
Q 023550 50 QNFTEAVADANRA 62 (281)
Q Consensus 50 ~~~~~A~~~~~~a 62 (281)
++.++|...+++|
T Consensus 213 n~p~~Ac~LAk~A 225 (261)
T 3ubw_A 213 NSPDRACRLAKAA 225 (261)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 4444444443333
No 371
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=27.99 E-value=74 Score=22.67 Aligned_cols=29 Identities=17% Similarity=0.035 Sum_probs=20.5
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE 30 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~ 30 (281)
|+.....|..+.+.|+|++|.+.+.++-+
T Consensus 22 Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~ 50 (109)
T 3k1s_A 22 ARSFAMEALQFAKQGKMAEADEAMVKAKE 50 (109)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34456667777788888888888777643
No 372
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.94 E-value=82 Score=22.74 Aligned_cols=46 Identities=9% Similarity=0.212 Sum_probs=28.7
Q ss_pred hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC
Q 023550 15 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (281)
Q Consensus 15 ~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~ 68 (281)
...|++|..+.+++|..+.. +.-...+.-|.+++..+.++|.+...
T Consensus 16 k~~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 16 REAYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhcccccc
Confidence 45678888888888887641 22333334456666666666666653
No 373
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=26.53 E-value=1e+02 Score=22.29 Aligned_cols=50 Identities=14% Similarity=0.380 Sum_probs=35.4
Q ss_pred cCCCeEEEEEEecCCCCcceEEEEeee-EEEEEEEcCCCCe-eeec-cccccc
Q 023550 180 QKPEEVVVTVFAKGIPAKNVTVDFGEQ-ILSVSIDVPGEEA-YHFQ-PRLFGK 229 (281)
Q Consensus 180 Qt~~~v~i~v~~k~~~~~~~~v~~~~~-~l~~~~~~~~~~~-~~~~-~~L~~~ 229 (281)
|.++.|.+++.++|...+.+.++|... ...|.+...+|.. |.++ .+.|-.
T Consensus 15 ~~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQ 67 (120)
T 3isy_A 15 QEPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQ 67 (120)
T ss_dssp ECSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCC
T ss_pred cCCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhh
Confidence 567789999999999899999999874 5688876644433 3332 245554
No 374
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=26.52 E-value=80 Score=22.93 Aligned_cols=27 Identities=19% Similarity=0.182 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023550 3 TDLEKKAKEAFIDDYFELAYDLYSQAI 29 (281)
Q Consensus 3 ~~~~~~g~~~~~~~~y~~Al~~y~~al 29 (281)
+..+..|..+.+.|+|++|.+++.++-
T Consensus 38 RS~~~eAl~~Ak~gdfe~A~~~l~eA~ 64 (120)
T 3l8r_A 38 RSIVHEAFDAMREKNYILAEQKLQEAN 64 (120)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345556666777777777777776653
No 375
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=26.40 E-value=14 Score=33.32 Aligned_cols=30 Identities=33% Similarity=0.426 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
|..+..+|..+-+.|+|++|+.+|..+++.
T Consensus 11 A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~ 40 (444)
T 2zan_A 11 AIDLASKAAQEDKAGNYEEALQLYQHAVQY 40 (444)
T ss_dssp ------------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 445777888888899999999999998876
No 376
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=26.03 E-value=1.9e+02 Score=23.66 Aligned_cols=15 Identities=20% Similarity=0.164 Sum_probs=6.9
Q ss_pred ccCHHHHHHHHHHHH
Q 023550 49 LQNFTEAVADANRAI 63 (281)
Q Consensus 49 l~~~~~A~~~~~~al 63 (281)
+++.++|...+++|+
T Consensus 189 ln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 189 ANSPEEAISLAKTTF 203 (236)
T ss_dssp SSCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 345555544444433
No 377
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=25.11 E-value=1.8e+02 Score=20.29 Aligned_cols=24 Identities=25% Similarity=0.137 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHH
Q 023550 4 DLEKKAKEAFIDDYFELAYDLYSQ 27 (281)
Q Consensus 4 ~~~~~g~~~~~~~~y~~Al~~y~~ 27 (281)
..+..+...+..++|..|-.+..+
T Consensus 36 dKl~~A~~Am~~~~y~~Ar~lAEq 59 (98)
T 4fm3_A 36 DKYAAAQIAMTAESYKKARLLAEQ 59 (98)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHH
Confidence 344444555555555555444444
No 378
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=24.65 E-value=1.7e+02 Score=27.90 Aligned_cols=25 Identities=12% Similarity=0.053 Sum_probs=18.3
Q ss_pred HHHHHhhcHHHHHHHHHHhhhcCCCC
Q 023550 78 TACMKLEEYETAKVALEKGASLAPGD 103 (281)
Q Consensus 78 ~~~~~~g~~~~A~~~~~~a~~l~p~~ 103 (281)
.-+++.|+|+.|+..+++. .+-|-+
T Consensus 546 ~~~~~~g~~~~AL~~i~~L-~llPl~ 570 (661)
T 2qx5_A 546 RELYFNKQWQETLSQMELL-DLLPFS 570 (661)
T ss_dssp HHHHHTTCHHHHHHHHHHT-SCSCC-
T ss_pred HHHHHcCCHHHHHHHHHhC-CCCCCC
Confidence 3348899999999999884 455544
No 379
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=24.55 E-value=1.6e+02 Score=26.69 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHcCCC-----------cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023550 52 FTEAVADANRAIELEPS-----------MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p~-----------~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l 99 (281)
|+..+++++.|+..-|. -..|+..+|.+|+..++|++|..+.++++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55567788888765442 2568889999999999999999999999864
No 380
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=24.54 E-value=1.5e+02 Score=26.62 Aligned_cols=48 Identities=17% Similarity=0.068 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHcCC-------------CcHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023550 52 FTEAVADANRAIELEP-------------SMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p-------------~~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l 99 (281)
|+..+.+++.|+.+-| +-..++..+|.+|+.+++|++|..+.+.++..
T Consensus 160 y~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 160 YQQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 4556777777765322 23568888999999999999999999999864
No 381
>3vtt_A Envelope protein E; immunoglobin like domain, epitope presentation, cellular ATT viral protein, structural protein; 1.70A {Dengue virus type 3} PDB: 4ala_C*
Probab=23.62 E-value=17 Score=25.85 Aligned_cols=14 Identities=14% Similarity=0.439 Sum_probs=11.4
Q ss_pred CCCCcccccCCCeE
Q 023550 172 PKYRHEFYQKPEEV 185 (281)
Q Consensus 172 ~k~r~~w~Qt~~~v 185 (281)
.+++|+|+|..++|
T Consensus 92 ~~l~~~W~k~GSsI 105 (107)
T 3vtt_A 92 KALKINWYRKGSSI 105 (107)
T ss_dssp TCEEEEEEECCCC-
T ss_pred CceEEEEccCCCcC
Confidence 47899999998875
No 382
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=22.88 E-value=3e+02 Score=22.23 Aligned_cols=50 Identities=8% Similarity=-0.075 Sum_probs=27.4
Q ss_pred hcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q 023550 15 DDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIK-LQNFTEAVADANRAIE 64 (281)
Q Consensus 15 ~~~y~~Al~~y~~al~~--------~p~~~~~~~~~a~~~~~-l~~~~~A~~~~~~al~ 64 (281)
.|+-+.|...|..|++. +|-...+.++.+..|+. +++.++|...+++|+.
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 34455666666666543 22223445555555443 4667777776666654
No 383
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=22.73 E-value=1.6e+02 Score=20.04 Aligned_cols=42 Identities=5% Similarity=-0.042 Sum_probs=30.8
Q ss_pred CeeeeccccccccccCcceEEEeCcEEEEEEeecCCCCCCccc
Q 023550 218 EAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLE 260 (281)
Q Consensus 218 ~~~~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~~~~W~~L~ 260 (281)
..|.+.++|.+ +.+++-...+.++.|.|.=++.....|...|
T Consensus 16 ~~~~v~~~lPG-~~~edi~v~~~~~~L~I~g~~~~~~~~~~~e 57 (102)
T 4fei_A 16 THLDLLLDVPG-VDAGTLALAEDGGQLTVSGERPGTEHLLRSE 57 (102)
T ss_dssp TEEEEEEECTT-CCGGGCEEEEETTEEEEEEEECCCSSCSSCC
T ss_pred CEEEEEEECCC-CchHhEEEEEECCEEEEEEEEecCCCEEEEE
Confidence 35777777754 5777778888899999988887666776554
No 384
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=22.67 E-value=1.4e+02 Score=26.91 Aligned_cols=47 Identities=23% Similarity=0.216 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHcCCC--------cHHHHHHHHHHHHHhhcHHHHHHHHHHhhh
Q 023550 52 FTEAVADANRAIELEPS--------MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p~--------~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~ 98 (281)
|+..+.+++.|+.+-|. -..|+..+|.+|+..++|++|..+.+.++.
T Consensus 154 y~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 154 WAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 56678888888875542 355888899999999999999999888764
No 385
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=22.60 E-value=1.7e+02 Score=19.84 Aligned_cols=28 Identities=7% Similarity=-0.006 Sum_probs=23.3
Q ss_pred cHHHHHHHHHHHHHhhcHHHHHHHHHHh
Q 023550 69 MSKAYWRKATACMKLEEYETAKVALEKG 96 (281)
Q Consensus 69 ~~~a~~~~g~~~~~~g~~~~A~~~~~~a 96 (281)
.+..|+.-|.-++..|++..|+.++.-+
T Consensus 38 mA~~Y~~Da~~fl~kGD~v~Ala~isYa 65 (87)
T 2pmr_A 38 RALNYRDDSVYYLEKGDHITSFGCITYA 65 (87)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4668888889999999999999988654
No 386
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=22.45 E-value=2.3e+02 Score=20.65 Aligned_cols=18 Identities=6% Similarity=0.060 Sum_probs=10.3
Q ss_pred HHHHhcCHHHHHHHHHHH
Q 023550 11 EAFIDDYFELAYDLYSQA 28 (281)
Q Consensus 11 ~~~~~~~y~~Al~~y~~a 28 (281)
.+|..+|.+..+..+...
T Consensus 49 lyf~~~n~~~m~~~L~pL 66 (126)
T 2npu_A 49 LYFGERNVKGMFEVLEPL 66 (126)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHhcccCHHHHHHHHHHH
Confidence 344666666666666544
No 387
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=22.28 E-value=1.1e+02 Score=22.40 Aligned_cols=30 Identities=23% Similarity=0.145 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 023550 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (281)
Q Consensus 2 a~~~~~~g~~~~~~~~y~~Al~~y~~al~~ 31 (281)
|+.++..|..++..||.-+|-+.|-+|...
T Consensus 7 Ae~yL~EA~ell~kGD~vQAsEK~ykAaee 36 (129)
T 2jpu_A 7 AEVYYEEAEEFLSKGDLVQACEKYYKAAEE 36 (129)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 678899999999999999998888887763
No 388
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=22.28 E-value=2.5e+02 Score=21.09 Aligned_cols=49 Identities=14% Similarity=0.070 Sum_probs=37.5
Q ss_pred HHHHHHHHHhc--CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCc
Q 023550 21 AYDLYSQAIEI--SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM 69 (281)
Q Consensus 21 Al~~y~~al~~--~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~ 69 (281)
+...|.-.... .-..+.+|...|..+...|++.+|.+.|+.+++.+..-
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P 134 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEP 134 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 44555544433 33457889999999999999999999999999987544
No 389
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=22.12 E-value=2.1e+02 Score=25.99 Aligned_cols=30 Identities=7% Similarity=0.258 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Q 023550 36 AELFADRAQASIKLQNFTEAVADANRAIEL 65 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l 65 (281)
..++..+|.+|+-.++|++|+..++.++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467888999999999999999999999964
No 390
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=21.95 E-value=50 Score=29.78 Aligned_cols=31 Identities=19% Similarity=-0.003 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Q 023550 36 AELFADRAQASIKLQNFTEAVADANRAIELE 66 (281)
Q Consensus 36 ~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~ 66 (281)
..++..+|.+|+-+++|++|+..++.++...
T Consensus 191 ~aA~aLlARvyL~~~~~~~A~~~a~~vi~~~ 221 (460)
T 3snx_A 191 DVVNGLMARAYLLTGQWGEAAKAAEAARKGY 221 (460)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 5678889999999999999999999999643
No 391
>3uzq_B Envelope protein; dengue antibody neutralization, immune system; HET: MES; 1.60A {Dengue virus 1} PDB: 4ffz_A 4ffy_A 3irc_A 3egp_A 4al8_C
Probab=21.19 E-value=19 Score=25.89 Aligned_cols=14 Identities=7% Similarity=0.366 Sum_probs=8.0
Q ss_pred CCCCcccccCCCeE
Q 023550 172 PKYRHEFYQKPEEV 185 (281)
Q Consensus 172 ~k~r~~w~Qt~~~v 185 (281)
.+++|+|+|..++|
T Consensus 91 ~~l~~qW~k~GSSI 104 (114)
T 3uzq_B 91 KALKLSWFKKGSSI 104 (114)
T ss_dssp TSEEEEEEC-----
T ss_pred CceEEEEccCCCcc
Confidence 47899999999876
No 392
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=20.84 E-value=2.3e+02 Score=20.05 Aligned_cols=74 Identities=15% Similarity=-0.097 Sum_probs=46.1
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHHH
Q 023550 14 IDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVAL 93 (281)
Q Consensus 14 ~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~~ 93 (281)
-....++|...-+ .+...+..--+-.-|...+...|+|++|+...+... .++.--..+.|-.++|--.++...+
T Consensus 18 G~H~HqEA~tIAd-wL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s~le~rL 91 (115)
T 2uwj_G 18 GQHCHEEALCIAE-WLERLGQDEAARLIRISSLANQGRYQEALAFAHGNP-----WPALEPWFALCEWHLGLGAALDRRL 91 (115)
T ss_dssp TTTCHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHTTCHHHHHGGGTTCC-----CGGGHHHHHHHHHHTTCHHHHHHHH
T ss_pred cchHHHHHHHHHH-HHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHHHHHHHH
Confidence 3445566655443 355555544445567788888999999876443322 3344444566777888877777766
No 393
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=20.75 E-value=2.3e+02 Score=20.06 Aligned_cols=75 Identities=12% Similarity=0.042 Sum_probs=46.5
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhhcHHHHHHH
Q 023550 13 FIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVA 92 (281)
Q Consensus 13 ~~~~~y~~Al~~y~~al~~~p~~~~~~~~~a~~~~~l~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~g~~~~A~~~ 92 (281)
--....++|...-+ .+...+..--+-.-|...+...|+|++|+...+... .++.--..+.|-.++|--.++...
T Consensus 18 TG~H~HqEA~tIAd-wL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s~le~r 91 (116)
T 2p58_C 18 TGNHYHEEANCIAE-WLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCEYRLGLGSALESR 91 (116)
T ss_dssp HTTTCHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHHHHHTCHHHHHHH
T ss_pred ccchHHHHHHHHHH-HHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHHHHHHH
Confidence 33445566655443 355555544445567788888999999987554432 333334456666777777777766
Q ss_pred H
Q 023550 93 L 93 (281)
Q Consensus 93 ~ 93 (281)
+
T Consensus 92 L 92 (116)
T 2p58_C 92 L 92 (116)
T ss_dssp H
T ss_pred H
Confidence 6
No 394
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.50 E-value=1.9e+02 Score=25.91 Aligned_cols=48 Identities=25% Similarity=0.104 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHcCCC-----------------------cHHHHHHHHHHHHHhhcHHHHHHHHHHhhhc
Q 023550 52 FTEAVADANRAIELEPS-----------------------MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (281)
Q Consensus 52 ~~~A~~~~~~al~l~p~-----------------------~~~a~~~~g~~~~~~g~~~~A~~~~~~a~~l 99 (281)
|+..+.+++.|+.+-|. -..|+..+|.+|+..|+|++|..+.++++..
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 55567788888765331 2457888999999999999999999988753
No 395
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=20.06 E-value=1.7e+02 Score=24.33 Aligned_cols=47 Identities=15% Similarity=0.048 Sum_probs=20.0
Q ss_pred CHHHHHHHHHHHHHcCCCcHH---HHHHHHHHHH-HhhcHHHHHHHHHHhh
Q 023550 51 NFTEAVADANRAIELEPSMSK---AYWRKATACM-KLEEYETAKVALEKGA 97 (281)
Q Consensus 51 ~~~~A~~~~~~al~l~p~~~~---a~~~~g~~~~-~~g~~~~A~~~~~~a~ 97 (281)
-|++|.+.+..-+.+.|.++- ..++.++-|+ -+++.++|....++|+
T Consensus 174 aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AF 224 (268)
T 3efz_A 174 FYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAI 224 (268)
T ss_dssp HHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 355555555443322444431 2222233333 2455555555444443
Done!