Query 023551
Match_columns 281
No_of_seqs 180 out of 1458
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 04:54:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023551.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023551hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 2.2E-49 4.8E-54 348.3 30.6 246 30-281 63-330 (365)
2 PTZ00224 protein phosphatase 2 100.0 1.1E-45 2.3E-50 326.0 30.5 248 17-281 6-271 (381)
3 COG0631 PTC1 Serine/threonine 100.0 2.3E-46 5E-51 317.7 24.2 240 29-281 5-252 (262)
4 KOG0698 Serine/threonine prote 100.0 6.6E-44 1.4E-48 312.2 29.7 250 30-281 37-304 (330)
5 KOG0697 Protein phosphatase 1B 100.0 1E-44 2.3E-49 294.0 21.9 258 17-280 6-290 (379)
6 PF00481 PP2C: Protein phospha 100.0 1.3E-44 2.9E-49 307.4 16.3 236 33-273 1-254 (254)
7 cd00143 PP2Cc Serine/threonine 100.0 4.8E-40 1E-44 279.1 27.6 240 33-280 2-254 (254)
8 PRK14559 putative protein seri 100.0 3.3E-40 7.2E-45 306.2 26.5 240 31-281 374-635 (645)
9 smart00332 PP2Cc Serine/threon 100.0 6E-39 1.3E-43 272.8 28.5 240 30-278 4-255 (255)
10 KOG0699 Serine/threonine prote 100.0 5E-37 1.1E-41 257.7 20.1 156 122-281 327-503 (542)
11 KOG0700 Protein phosphatase 2C 100.0 1.3E-32 2.9E-37 236.1 18.9 209 60-268 96-378 (390)
12 KOG1323 Serine/threonine phosp 100.0 5.5E-27 1.2E-31 195.5 18.8 221 60-280 141-486 (493)
13 KOG1379 Serine/threonine prote 99.9 1.9E-25 4E-30 186.1 22.0 197 46-280 90-330 (330)
14 KOG0618 Serine/threonine phosp 99.9 7.3E-24 1.6E-28 197.7 16.6 251 22-281 512-772 (1081)
15 PF13672 PP2C_2: Protein phosp 99.9 3E-21 6.5E-26 159.7 14.1 178 37-249 3-193 (212)
16 smart00331 PP2C_SIG Sigma fact 99.8 3.3E-18 7.2E-23 139.4 22.7 184 32-265 4-192 (193)
17 TIGR02865 spore_II_E stage II 99.7 2.5E-16 5.5E-21 151.5 22.8 186 46-280 566-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.6 6.6E-14 1.4E-18 113.9 20.4 176 61-281 2-193 (193)
19 COG2208 RsbU Serine phosphatas 98.8 3.9E-06 8.4E-11 75.2 22.3 187 46-281 161-366 (367)
20 PRK10693 response regulator of 83.0 18 0.00038 31.5 10.5 100 47-157 150-259 (303)
21 PF09436 DUF2016: Domain of un 60.7 5.8 0.00013 26.5 1.5 20 220-239 23-42 (72)
22 COG2168 DsrH Uncharacterized c 47.6 15 0.00032 26.0 1.8 27 224-250 25-51 (96)
23 COG3700 AphA Acid phosphatase 37.6 67 0.0015 25.7 4.3 45 224-268 71-130 (237)
24 PRK02391 heat shock protein Ht 27.0 66 0.0014 28.0 3.1 37 213-250 104-140 (296)
25 PF14014 DUF4230: Protein of u 27.0 2.8E+02 0.0062 21.0 6.8 40 210-249 75-114 (157)
26 PRK05457 heat shock protein Ht 26.8 82 0.0018 27.2 3.6 37 213-250 105-141 (284)
27 TIGR00722 ttdA_fumA_fumB hydro 26.0 2.4E+02 0.0053 24.2 6.2 69 70-143 183-254 (273)
28 PRK03982 heat shock protein Ht 24.9 91 0.002 26.9 3.6 27 224-250 106-132 (288)
29 PRK03072 heat shock protein Ht 23.4 84 0.0018 27.2 3.0 27 224-250 108-134 (288)
30 PF06972 DUF1296: Protein of u 22.6 1.3E+02 0.0027 19.3 2.9 26 237-262 18-44 (60)
31 PF04077 DsrH: DsrH like prote 21.0 24 0.00052 24.5 -0.7 25 224-248 19-43 (88)
32 PRK04897 heat shock protein Ht 20.1 1.1E+02 0.0024 26.6 3.2 37 213-250 108-144 (298)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=2.2e-49 Score=348.32 Aligned_cols=246 Identities=35% Similarity=0.556 Sum_probs=208.4
Q ss_pred CceeEEEEeecCCCCCCCCCeeEeeeccc--------CCCCeEEEEEEeCCCCchHHHHHHHHHHHHHHcCCCCCCCHHH
Q 023551 30 KHVTHGYHLVKGKAGHPMEDYVVAQFKQV--------DENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPES 101 (281)
Q Consensus 30 ~~~~~~~~s~~G~r~~~neD~~~~~~~~~--------~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~ 101 (281)
+.+.++..|++|.|+ .|||++++..... ......+|+|||||||+.+|+++++.+.+.+.+......++..
T Consensus 63 ~~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~ 141 (365)
T PLN03145 63 PVVRSGAWADIGSRS-SMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEK 141 (365)
T ss_pred CceEEEEEccccCCC-CCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHH
Confidence 567899999999866 9999987532211 1223579999999999999999999999998876555556778
Q ss_pred HHHHHHHHHhHHHHHhhcc-cCCCCccEEEEEEEeCCEEEEEEcCCceEEEEeCCeeeeCCCCCCCCc--HHHHHHhCCC
Q 023551 102 AVRRAYCITDTTILEKAVD-LGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSS--EREHIEGRGG 178 (281)
Q Consensus 102 ~l~~~~~~~~~~l~~~~~~-~~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~r~~~~~~lt~dh~~~~--e~~rl~~~g~ 178 (281)
.|.++|..+++.+.+.... ....+|||++++++.++.+|++|+||||+|+++++++.+||+||++.+ |++||...||
T Consensus 142 al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg 221 (365)
T PLN03145 142 VVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGG 221 (365)
T ss_pred HHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCC
Confidence 8999999999998765432 234589999999999999999999999999999999999999999985 8889999999
Q ss_pred eEEcCCCCCCccCCeeeccccccCccccC-------CccCCCceEEEEcCCCCeEEEEEcCCcccCCCHHHHHHHHH---
Q 023551 179 FVSNFPGDVPRVDGQLAVARAFGDKSLKM-------HLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIK--- 248 (281)
Q Consensus 179 ~~~~~~~~~~~~~~~~~ltralG~~~~~~-------~v~~~p~i~~~~l~~~~~~llL~SDGl~d~l~~~ei~~i~~--- 248 (281)
.+.. .+.++.+.+||+||+..+|. .+.++|++..+++.++++|||||||||||+|+++++.++++
T Consensus 222 ~v~~-----g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l 296 (365)
T PLN03145 222 YVYD-----GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRL 296 (365)
T ss_pred ceec-----ceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHH
Confidence 8863 36677788999999987653 36789999999999867788999999999999999866653
Q ss_pred -hcCCHHHHHHHHHHHHHhcCCCCCcEEEEEEeC
Q 023551 249 -NIKDARSAARHLTEEALARNSSDDISCVVVKFN 281 (281)
Q Consensus 249 -~~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~~~ 281 (281)
...+|+++|+.|++.|+.+++.||+|||||+|+
T Consensus 297 ~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~ 330 (365)
T PLN03145 297 QEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQ 330 (365)
T ss_pred hcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEee
Confidence 346899999999999999999999999999984
No 2
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.1e-45 Score=326.02 Aligned_cols=248 Identities=32% Similarity=0.520 Sum_probs=202.4
Q ss_pred CCCCCCCCCcc-CCCceeEEEEeecCCCCCCCCCeeEeeecccCCCCeEEEEEEeCCCCchHHHHHHHHHHHHHHcCCCC
Q 023551 17 SSPDSGKGKSK-MKKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNF 95 (281)
Q Consensus 17 ~~p~~~~~~~~-~~~~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~ 95 (281)
++|..+..+.. ....+.+|..+++|+|+ .|||++++.. ..+..+|+|||||||..++.++++.+...+.+....
T Consensus 6 ~~p~~~~~~~~~~~~~~~~g~~s~~G~R~-~nED~~~v~~----~~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~ 80 (381)
T PTZ00224 6 PKPVLSKLVDRAGNSIFRCASACVNGYRE-SMEDAHLLYL----TDDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEP 80 (381)
T ss_pred CCCccccccccCCCccEEEEEEeCCCCCC-CCCCeeEecc----CCCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcccc
Confidence 45555555444 33789999999999987 8999987532 234579999999999999999999988777543322
Q ss_pred CCCHHHHHHHHHHHHhHHHHHhhcccCCCCccEEEEEEE-eCCEEEEEEcCCceEEEEeCCeeeeCCCCCCCCc--HHHH
Q 023551 96 WQDPESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILI-NCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSS--EREH 172 (281)
Q Consensus 96 ~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~i-~~~~~~~~~vGDsr~~l~r~~~~~~lt~dh~~~~--e~~r 172 (281)
. ....|++++..+++.+.+... .+|||++++++ .+.+++++||||||+|++|+|++.+||.||++.+ |+.|
T Consensus 81 ~--~~~~l~~a~~~~d~~i~~~~~----~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~R 154 (381)
T PTZ00224 81 M--TDERMEELCLEIDEEWMDSGR----EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQR 154 (381)
T ss_pred c--cHHHHHHHHHHHHHHHHhccc----CCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhH
Confidence 1 235689999999999875432 23555555554 4689999999999999999999999999999986 7889
Q ss_pred HHhCCCeEEcCCCCCCccCCeeeccccccCccccC---------CccCCCceEEEEcCCCCeEEEEEcCCccc-CCCHHH
Q 023551 173 IEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM---------HLSSEPHVVMETIDDDTEFIILASDGLWK-VMSNQD 242 (281)
Q Consensus 173 l~~~g~~~~~~~~~~~~~~~~~~ltralG~~~~~~---------~v~~~p~i~~~~l~~~~~~llL~SDGl~d-~l~~~e 242 (281)
|...|+.+.. .|.+|.+.+||+||+..+|. .|.+.|++..+.+.+ +|+|||||||||| .+++++
T Consensus 155 I~~~gg~v~~-----~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~-~D~llLaSDGL~d~~ls~eE 228 (381)
T PTZ00224 155 IEACGGRVVS-----NRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQS-NDFIILACDGVFEGNFSNEE 228 (381)
T ss_pred HHHccCEecc-----ccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCC-CCEEEEECCCcCcCccCHHH
Confidence 9999988763 37788899999999976542 355789999999998 8999999999999 899999
Q ss_pred HHHHHHh----cCCHHHHHHHHHHHHHhcCCCCCcEEEEEEeC
Q 023551 243 AADAIKN----IKDARSAARHLTEEALARNSSDDISCVVVKFN 281 (281)
Q Consensus 243 i~~i~~~----~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~~~ 281 (281)
+.+++.. ..+++.+|+.|++.|+.+|+.||+|||||+|.
T Consensus 229 i~~iv~~~l~~~~~~~~aA~~Lv~~A~~rGs~DNITvIvV~~~ 271 (381)
T PTZ00224 229 VVAFVKEQLETCDDLAVVAGRVCDEAIRRGSKDNISCLIVQLK 271 (381)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEee
Confidence 9998863 36899999999999999999999999999874
No 3
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-46 Score=317.69 Aligned_cols=240 Identities=30% Similarity=0.393 Sum_probs=204.6
Q ss_pred CCceeEEEEeecCCCCCCCCCeeEeeecccCCCCeEEEEEEeCCCCchHHHHHHHHHHHHHHcCCC----CC-CC-HHHH
Q 023551 29 KKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPN----FW-QD-PESA 102 (281)
Q Consensus 29 ~~~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~----~~-~~-~~~~ 102 (281)
...+.++..++.|..++.|||++.+........ ..+|+|||||||++++++|++.+++.+.+... .. .+ ..+.
T Consensus 5 ~~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~ 83 (262)
T COG0631 5 ILSLKVAGLSDVGTVRKHNEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEEL 83 (262)
T ss_pred cceeeeeeeccCCCccCCCCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHH
Confidence 456788899999999989999999766433333 67999999999999999999988888765321 11 11 5789
Q ss_pred HHHHHHHHhHHHHHhhc--ccCCCCccEEEEEEEeCCEEEEEEcCCceEEEEeCCeeeeCCCCCCCCcHHHHHHhCCCeE
Q 023551 103 VRRAYCITDTTILEKAV--DLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFV 180 (281)
Q Consensus 103 l~~~~~~~~~~l~~~~~--~~~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~r~~~~~~lt~dh~~~~e~~rl~~~g~~~ 180 (281)
+.+++..+++.+..... ....++|||++++++.++++|++||||||+|++|++.++|||.||++.++ ++..+...
T Consensus 84 l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~---~~~~~~~~ 160 (262)
T COG0631 84 LKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNR---LEQRGIIT 160 (262)
T ss_pred HHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHH---HHHhcCCC
Confidence 99999999999988764 22478999999999999999999999999999999999999999998764 34455455
Q ss_pred EcCCCCCCccCCeeeccccccCccccCCccCCCceEEEEcCCCCeEEEEEcCCcccCCCHHHHHHHHHhcCCHHHHHHHH
Q 023551 181 SNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHL 260 (281)
Q Consensus 181 ~~~~~~~~~~~~~~~ltralG~~~~~~~v~~~p~i~~~~l~~~~~~llL~SDGl~d~l~~~ei~~i~~~~~~~~~~a~~l 260 (281)
+.....+|+.+ .+||+||+.. ...|++....+.+ +++||||||||||.++++++.++++...+++++++.|
T Consensus 161 ~~~~~~~~~~~---~ltralG~~~-----~~~p~~~~~~~~~-~d~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~l 231 (262)
T COG0631 161 PEEARSHPRRN---ALTRALGDFD-----LLEPDITELELEP-GDFLLLCSDGLWDVVSDDEIVDILKNSETPQEAADKL 231 (262)
T ss_pred HHHHHhCccch---hhhhhcCCCc-----ccceeEEEEEcCC-CCEEEEECCCCccCcCHHHHHHHHhcCCCHHHHHHHH
Confidence 54444556655 9999999998 6899999999999 7999999999999999999999999888999999999
Q ss_pred HHHHHhcCCCCCcEEEEEEeC
Q 023551 261 TEEALARNSSDDISCVVVKFN 281 (281)
Q Consensus 261 ~~~a~~~~~~Dn~Tvivv~~~ 281 (281)
++.|+.+++.||+|+++|++.
T Consensus 232 i~~a~~~g~~DNiT~ilv~~~ 252 (262)
T COG0631 232 IELALEGGGPDNITVVLVRLN 252 (262)
T ss_pred HHHHHhcCCCCceEEEEEEee
Confidence 999999999999999999863
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-44 Score=312.21 Aligned_cols=250 Identities=46% Similarity=0.689 Sum_probs=213.4
Q ss_pred CceeEE-EEeecCCCCCCCCCeeEeeecc----cCCC-CeEEEEEEeCCCCchHHHHHHHHHHHHHHcCCCCCCC---HH
Q 023551 30 KHVTHG-YHLVKGKAGHPMEDYVVAQFKQ----VDEN-ELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQD---PE 100 (281)
Q Consensus 30 ~~~~~~-~~s~~G~r~~~neD~~~~~~~~----~~~~-~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~---~~ 100 (281)
..+..+ ..+.+|+++ .|||++...... .... ...+|||||||||..+|+++.+.+...+.+....... ..
T Consensus 37 ~~~~~~~~~~~~~~r~-~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~ 115 (330)
T KOG0698|consen 37 ESYRLGSLLSIRGRRR-KMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVK 115 (330)
T ss_pred ccccceEEEecCCCCC-ccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHH
Confidence 334444 457788777 899999864432 2233 5799999999999999999999999999987766653 78
Q ss_pred HHHHHHHH-HHhHHHHHhhcccCCCCccEEEEEEEeCCEEEEEEcCCceEEEEeCC-eeeeCCCCCCCC--cHHHHHHhC
Q 023551 101 SAVRRAYC-ITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNG-VAKQLSVDHEPS--SEREHIEGR 176 (281)
Q Consensus 101 ~~l~~~~~-~~~~~l~~~~~~~~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~r~~-~~~~lt~dh~~~--~e~~rl~~~ 176 (281)
..++++|. .++..+..........++|++++++..+..+|++|+||||+++++.| ...+||.||.+. .|+.||..+
T Consensus 116 ~a~~~~F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~ 195 (330)
T KOG0698|consen 116 DALRRAFLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAA 195 (330)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHc
Confidence 99999999 69999887622223556666666666566999999999999999866 899999999996 599999999
Q ss_pred CCeEEcCCCCCCccCCeeeccccccCcccc-CCccCCCceEEEEcCCCCeEEEEEcCCcccCCCHHHHHHHHHh----cC
Q 023551 177 GGFVSNFPGDVPRVDGQLAVARAFGDKSLK-MHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKN----IK 251 (281)
Q Consensus 177 g~~~~~~~~~~~~~~~~~~ltralG~~~~~-~~v~~~p~i~~~~l~~~~~~llL~SDGl~d~l~~~ei~~i~~~----~~ 251 (281)
||++....+ .+|++|.++++|+|||..+| +.|.++|++....+.+.++||||+||||||.++++|++++++. ..
T Consensus 196 GG~v~~~~~-~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~ 274 (330)
T KOG0698|consen 196 GGRVSNWGG-VWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASIS 274 (330)
T ss_pred CCEEEEcCC-cceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccc
Confidence 999996544 57999999999999999999 8899999999999999899999999999999999999999988 56
Q ss_pred CHHHHHHHHHHHHHhcCCCCCcEEEEEEeC
Q 023551 252 DARSAARHLTEEALARNSSDDISCVVVKFN 281 (281)
Q Consensus 252 ~~~~~a~~l~~~a~~~~~~Dn~Tvivv~~~ 281 (281)
++..++..|.+.|..+++.||+|||||.|+
T Consensus 275 ~~~~a~~~l~~~a~~~~s~DnitvvvV~l~ 304 (330)
T KOG0698|consen 275 SPLAAAKLLATEALSRGSKDNITVVVVRLK 304 (330)
T ss_pred cHHHHHHHHHHHHhhcCCCCCeEEEEEEec
Confidence 899999999999999999999999999984
No 5
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-44 Score=294.02 Aligned_cols=258 Identities=29% Similarity=0.507 Sum_probs=223.3
Q ss_pred CCCCCCCCCccCC-CceeEEEEeecCCCCCCCCCeeEeeecc-cCCCCeEEEEEEeCCCCchHHHHHHHHHHHHHHcCCC
Q 023551 17 SSPDSGKGKSKMK-KHVTHGYHLVKGKAGHPMEDYVVAQFKQ-VDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPN 94 (281)
Q Consensus 17 ~~p~~~~~~~~~~-~~~~~~~~s~~G~r~~~neD~~~~~~~~-~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~ 94 (281)
..|.+++..-.-. +.+.||.+|++|+|- +|||++.+.... ..-+++.+|+|||||.|++.|..++..++..+.+...
T Consensus 6 dKPkteKhn~~G~GNglryg~SSMQGWR~-eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~ 84 (379)
T KOG0697|consen 6 DKPKTEKHNAEGEGNGLRYGVSSMQGWRV-EMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEE 84 (379)
T ss_pred cCcccccccccCcCCceeeeeccccchhh-hhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHH
Confidence 4566665544433 899999999999999 999998753322 2347789999999999999999999999999987654
Q ss_pred CCC--------CHHHHHHHHHHHHhHHHHHhhccc--CCCCccEEEEEEEeCCEEEEEEcCCceEEEEeCCeeeeCCCCC
Q 023551 95 FWQ--------DPESAVRRAYCITDTTILEKAVDL--GKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDH 164 (281)
Q Consensus 95 ~~~--------~~~~~l~~~~~~~~~~l~~~~~~~--~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~r~~~~~~lt~dh 164 (281)
+.. +.+.-|+..|.+.++-++...... ...+|||.+++++....+|++|+||||++++|+|+...-|+||
T Consensus 85 F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDH 164 (379)
T KOG0697|consen 85 FRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDH 164 (379)
T ss_pred HhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCC
Confidence 443 567789999999988877655322 2458999999999999999999999999999999999999999
Q ss_pred CCCc--HHHHHHhCCCeEEcCCCCCCccCCeeeccccccCccccC---------CccCCCceEEEEcCCCCeEEEEEcCC
Q 023551 165 EPSS--EREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM---------HLSSEPHVVMETIDDDTEFIILASDG 233 (281)
Q Consensus 165 ~~~~--e~~rl~~~g~~~~~~~~~~~~~~~~~~ltralG~~~~~~---------~v~~~p~i~~~~l~~~~~~llL~SDG 233 (281)
.+.. |++||..+||.+- ..|.||.++++|||||..+|. .|+++|++........++|+||++||
T Consensus 165 KP~~p~EkeRIqnAGGSVM-----IqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDG 239 (379)
T KOG0697|consen 165 KPYLPKEKERIQNAGGSVM-----IQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDG 239 (379)
T ss_pred CCCChHHHHHHhcCCCeEE-----EEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccc
Confidence 9985 9999999999887 359999999999999999985 38999999999998889999999999
Q ss_pred cccCCCHHHHHHHHHhc----CCHHHHHHHHHHHHHhcCCCCCcEEEEEEe
Q 023551 234 LWKVMSNQDAADAIKNI----KDARSAARHLTEEALARNSSDDISCVVVKF 280 (281)
Q Consensus 234 l~d~l~~~ei~~i~~~~----~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~~ 280 (281)
+||.|+++|+.++++.. .+...+|..+++.++-+|++||+|+++|-|
T Consensus 240 IwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcf 290 (379)
T KOG0697|consen 240 IWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCF 290 (379)
T ss_pred hhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhccCccCceEEEEec
Confidence 99999999999998763 689999999999999999999999999876
No 6
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=1.3e-44 Score=307.45 Aligned_cols=236 Identities=39% Similarity=0.596 Sum_probs=194.4
Q ss_pred eEEEEeecCCCCCCCCCeeEeeeccc---CCCCeEEEEEEeCCCCchHHHHHHHHHHHHHHcCCCCCC--CHHHHHHHHH
Q 023551 33 THGYHLVKGKAGHPMEDYVVAQFKQV---DENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQ--DPESAVRRAY 107 (281)
Q Consensus 33 ~~~~~s~~G~r~~~neD~~~~~~~~~---~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~ 107 (281)
.+|+.+..|.|. .|||++++..... ......+|+|||||||..++.+++..+...+.+...... .+...|..+|
T Consensus 1 ~~~~~~~~g~r~-~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~ 79 (254)
T PF00481_consen 1 DYGVSSMQGVRK-EMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAF 79 (254)
T ss_dssp EEEEEEEECTSS-SHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CcCeecCCCCCC-cccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhccccee
Confidence 378899999999 9999999765432 346789999999999999999999999976665433222 4778999999
Q ss_pred HH-HhHHHHHhhcc-cCCCCccEEEEEEEeCCEEEEEEcCCceEEEEeCCeee-eCCCCCCCCc--HHHHHHhCCCeEEc
Q 023551 108 CI-TDTTILEKAVD-LGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAK-QLSVDHEPSS--EREHIEGRGGFVSN 182 (281)
Q Consensus 108 ~~-~~~~l~~~~~~-~~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~r~~~~~-~lt~dh~~~~--e~~rl~~~g~~~~~ 182 (281)
.. ++..+...... ....+|||++++++.++++|++|+||||+|+++++... +||+||++.+ |+.||++.||.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~ 159 (254)
T PF00481_consen 80 LAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSE 159 (254)
T ss_dssp HHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEE
T ss_pred eecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccccccc
Confidence 99 88888763321 33678999999999999999999999999999999888 9999999985 99999999999985
Q ss_pred CCCCCCccCCeeeccccccCccccC----CccCCCceEEEEcCCCCeEEEEEcCCcccCCCHHHHHHHHHhcCC----HH
Q 023551 183 FPGDVPRVDGQLAVARAFGDKSLKM----HLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKD----AR 254 (281)
Q Consensus 183 ~~~~~~~~~~~~~ltralG~~~~~~----~v~~~p~i~~~~l~~~~~~llL~SDGl~d~l~~~ei~~i~~~~~~----~~ 254 (281)
..|.++.+.+||+||+..+|+ .|.++|++..+++.+.++|||||||||||+++++|+.+++....+ |+
T Consensus 160 ----~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~ 235 (254)
T PF00481_consen 160 ----NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQ 235 (254)
T ss_dssp ----TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHH
T ss_pred ----chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHH
Confidence 458888899999999999998 899999999999999656999999999999999999999987644 99
Q ss_pred HHHHHHHHHHHhcCCCCCc
Q 023551 255 SAARHLTEEALARNSSDDI 273 (281)
Q Consensus 255 ~~a~~l~~~a~~~~~~Dn~ 273 (281)
.+|+.|++.|+++|+.|||
T Consensus 236 ~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 236 EAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHHHHHHHHHHHTTHHSHE
T ss_pred HHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999996
No 7
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=4.8e-40 Score=279.10 Aligned_cols=240 Identities=45% Similarity=0.640 Sum_probs=203.2
Q ss_pred eEEEEeecCCCCCCCCCeeEeeecccCCCCeEEEEEEeCCCCchHHHHHHHHHHHHHHcCCCC-----CCCHHHHHHHHH
Q 023551 33 THGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNF-----WQDPESAVRRAY 107 (281)
Q Consensus 33 ~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~ 107 (281)
.+++.+..|.|. .|||++++...... .+..+|+|||||||+..++++++.+...+.+.... ...+...|+++|
T Consensus 2 ~~~~~~~~g~r~-~neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~ 79 (254)
T cd00143 2 SAGVSDKGGDRK-TNEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAF 79 (254)
T ss_pred ceeeecCCCCCC-CCcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Confidence 467778888877 99999986433110 25689999999999999999999998888764332 235667899999
Q ss_pred HHHhHHHHHhhcc--cCCCCccEEEEEEEeCCEEEEEEcCCceEEEEeCCeeeeCCCCCCCCc--HHHHHHhCCCeEEcC
Q 023551 108 CITDTTILEKAVD--LGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSS--EREHIEGRGGFVSNF 183 (281)
Q Consensus 108 ~~~~~~l~~~~~~--~~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~r~~~~~~lt~dh~~~~--e~~rl~~~g~~~~~~ 183 (281)
..+++.+...... ....++||++++++.++.++++|+||||+|+++++++.++|.||++.+ +..|+...++++.
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~-- 157 (254)
T cd00143 80 LRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS-- 157 (254)
T ss_pred HHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE--
Confidence 9999999877542 235689999999999999999999999999999999999999999985 7788888887654
Q ss_pred CCCCCccCCeeeccccccCccccCCccCCCceEEEEc-CCCCeEEEEEcCCcccCCCHHHHHHHHHhcC---CHHHHHHH
Q 023551 184 PGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETI-DDDTEFIILASDGLWKVMSNQDAADAIKNIK---DARSAARH 259 (281)
Q Consensus 184 ~~~~~~~~~~~~ltralG~~~~~~~v~~~p~i~~~~l-~~~~~~llL~SDGl~d~l~~~ei~~i~~~~~---~~~~~a~~ 259 (281)
..+.++...+||++|...+|+.+...|++....+ .+ +++|||||||||++++++++.+++.... +++++|+.
T Consensus 158 ---~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~-~d~ill~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~ 233 (254)
T cd00143 158 ---NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTED-DDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQE 233 (254)
T ss_pred ---eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCC-CcEEEEECCCCeeccChHHHHHHHHHHhcccCHHHHHHH
Confidence 1244456799999999987777789999999999 55 9999999999999999999999998876 89999999
Q ss_pred HHHHHHhcCCCCCcEEEEEEe
Q 023551 260 LTEEALARNSSDDISCVVVKF 280 (281)
Q Consensus 260 l~~~a~~~~~~Dn~Tvivv~~ 280 (281)
|++.|..+++.||+|+|++++
T Consensus 234 l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 234 LVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred HHHHHHhCCCCCCEEEEEEeC
Confidence 999999999999999999975
No 8
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=3.3e-40 Score=306.25 Aligned_cols=240 Identities=20% Similarity=0.275 Sum_probs=183.5
Q ss_pred ceeEEEEeecCCCCCCCCCeeEeeecc----cC-C---CCeEEEEEEeCCCCchHHHHHHHHHHHHHHc----CCCCCCC
Q 023551 31 HVTHGYHLVKGKAGHPMEDYVVAQFKQ----VD-E---NELGLFAIFDGHLSHEIPDFLRTHLFENILN----EPNFWQD 98 (281)
Q Consensus 31 ~~~~~~~s~~G~r~~~neD~~~~~~~~----~~-~---~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~----~~~~~~~ 98 (281)
.++++..|++|.+|+.|||++.+.... .+ + ....+|+|||||||+.+++.|++.+++.+.+ .......
T Consensus 374 ~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~ 453 (645)
T PRK14559 374 SLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELP 453 (645)
T ss_pred eEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhccccc
Confidence 588899999998777999998653210 00 1 1356899999999998888777766665532 1111112
Q ss_pred HHHHHHHHHHHHhHHHHHhhcc----cCCCCccEEEEEEEeCCEEEEEEcCCceEEEE-eCCeeeeCCCCCCCCcHHHHH
Q 023551 99 PESAVRRAYCITDTTILEKAVD----LGKGGSTAVTAILINCEKLVVANVGDSRAVIC-KNGVAKQLSVDHEPSSEREHI 173 (281)
Q Consensus 99 ~~~~l~~~~~~~~~~l~~~~~~----~~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~-r~~~~~~lt~dh~~~~e~~rl 173 (281)
....+++++..+|+.+.+.... ....+|||++++++.++++|++||||||+|++ |+|++++||+||++.++ +
T Consensus 454 ~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~---l 530 (645)
T PRK14559 454 DEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQR---E 530 (645)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHH---H
Confidence 3567999999999999875422 22468999999999999999999999999998 56899999999998643 4
Q ss_pred HhCCCeEEcCCCCCCccCCeeeccccccCccccCCccCCCceEEEEcCCCCeEEEEEcCCcccC--CCH---HHHHHHHH
Q 023551 174 EGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKV--MSN---QDAADAIK 248 (281)
Q Consensus 174 ~~~g~~~~~~~~~~~~~~~~~~ltralG~~~~~~~v~~~p~i~~~~l~~~~~~llL~SDGl~d~--l~~---~ei~~i~~ 248 (281)
++.| ....... ..++.+.+||+||+...+ ..+|++..+.+.+ +++||||||||||+ +.. +++..++.
T Consensus 531 v~~G-i~~~~a~---~~p~~~~LTrALG~~~~~---~l~Pdi~~~~L~~-gD~lLLCSDGL~D~~~ve~~~~~~l~~il~ 602 (645)
T PRK14559 531 IQRG-VEPQIAY---ARPDAYQLTQALGPRDNS---AIQPDIQFLEIEE-DTLLLLCSDGLSDNDLLETHWQTHLLPLLS 602 (645)
T ss_pred HHhC-CCHHHHh---cCcccceeeeccCCCCCC---cccceEEEEEcCC-CCEEEEECCCCCCCcccchHHHHHHHHHHh
Confidence 5555 2222222 223456999999986533 3589999999998 89999999999994 554 34566777
Q ss_pred hcCCHHHHHHHHHHHHHhcCCCCCcEEEEEEeC
Q 023551 249 NIKDARSAARHLTEEALARNSSDDISCVVVKFN 281 (281)
Q Consensus 249 ~~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~~~ 281 (281)
...++.++++.|++.|+.+|++||+|+|||+++
T Consensus 603 ~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~ 635 (645)
T PRK14559 603 SSANLDQGLNKLIDLANQYNGHDNITAILVRLK 635 (645)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEec
Confidence 777899999999999999999999999999874
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=6e-39 Score=272.82 Aligned_cols=240 Identities=44% Similarity=0.640 Sum_probs=204.2
Q ss_pred CceeEEEEeecCCCCCCCCCeeEeeecccCCCCeEEEEEEeCCCCchHHHHHHHHHHHHHHcCCCCC----CCHHHHHHH
Q 023551 30 KHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFW----QDPESAVRR 105 (281)
Q Consensus 30 ~~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~----~~~~~~l~~ 105 (281)
..+.+++.+..|.|. .|||++++... ...+..+|+|||||||..+++++++.+...+.+..... ..+...|.+
T Consensus 4 ~~~~~~~~~~~~~r~-~neD~~~~~~~--~~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (255)
T smart00332 4 LGLRYGLSSMQGVRK-PMEDAHVITPD--LSDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRK 80 (255)
T ss_pred CceeEEEecCCCCCC-CCcceEEEecc--CCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHH
Confidence 446778877777766 99999986432 12557899999999999999999999998887654333 247788999
Q ss_pred HHHHHhHHHHHhhccc--CCCCccEEEEEEEeCCEEEEEEcCCceEEEEeCCeeeeCCCCCCCCc--HHHHHHhCCCeEE
Q 023551 106 AYCITDTTILEKAVDL--GKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSS--EREHIEGRGGFVS 181 (281)
Q Consensus 106 ~~~~~~~~l~~~~~~~--~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~r~~~~~~lt~dh~~~~--e~~rl~~~g~~~~ 181 (281)
++..+++.+....... ...++||++++++..+.++++|+||||+|++|++++.++|+||++.+ |..++...++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~ 160 (255)
T smart00332 81 AFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVI 160 (255)
T ss_pred HHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEE
Confidence 9999999998776543 25689999999999999999999999999999999999999999975 7788888888765
Q ss_pred cCCCCCCccCCeeeccccccCccccCCccCCCceEEEEc-CCCCeEEEEEcCCcccCCCHHHHHHHHHhcC---CHHHHH
Q 023551 182 NFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETI-DDDTEFIILASDGLWKVMSNQDAADAIKNIK---DARSAA 257 (281)
Q Consensus 182 ~~~~~~~~~~~~~~ltralG~~~~~~~v~~~p~i~~~~l-~~~~~~llL~SDGl~d~l~~~ei~~i~~~~~---~~~~~a 257 (281)
.. +.++...+||++|...+|+.+...|++...++ .+ +++|||||||||++++++++.+++.... ++.++|
T Consensus 161 ~~-----~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~-~d~ill~SDGv~~~l~~~~i~~~~~~~~~~~~~~~~~ 234 (255)
T smart00332 161 NG-----RVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEK-DDFLILASDGLWDVLSNQEVVDIVRKHLSKSDPEEAA 234 (255)
T ss_pred CC-----eECCeEecccccCCHhhcCCeEeeeEEEEEEecCC-CcEEEEECCccccCCCHHHHHHHHHHHhhcCCHHHHH
Confidence 31 44556799999999998888889999999997 55 9999999999999999999999998765 699999
Q ss_pred HHHHHHHHhcCCCCCcEEEEE
Q 023551 258 RHLTEEALARNSSDDISCVVV 278 (281)
Q Consensus 258 ~~l~~~a~~~~~~Dn~Tvivv 278 (281)
+.|++.|..++..||+|+||+
T Consensus 235 ~~l~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 235 KRLIDLALARGSKDNITVIVV 255 (255)
T ss_pred HHHHHHHHHcCCCCCeEEEEC
Confidence 999999999999999999985
No 10
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-37 Score=257.71 Aligned_cols=156 Identities=34% Similarity=0.644 Sum_probs=141.4
Q ss_pred CCCCccEEEEEEEeCCEEEEEEcCCceEEEEeCCeeeeCCCCCCCCc--HHHHHHhCCCeEEcCCCCCCccCCeeecccc
Q 023551 122 GKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSS--EREHIEGRGGFVSNFPGDVPRVDGQLAVARA 199 (281)
Q Consensus 122 ~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~r~~~~~~lt~dh~~~~--e~~rl~~~g~~~~~~~~~~~~~~~~~~ltra 199 (281)
+..+|||.+++++.+++++++|.||||+++.|+|+.+-++.||.+.. |..||..+||.+.- .+|+||.+.++|+
T Consensus 327 G~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtl----DGRVNGGLNLSRA 402 (542)
T KOG0699|consen 327 GEDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTL----DGRVNGGLNLSRA 402 (542)
T ss_pred CCCCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEee----cceecCccchhhh
Confidence 45679999999999999999999999999999999999999999986 77899999999983 4699999999999
Q ss_pred ccCccccCC---------ccCCCceEEEEcCCCCeEEEEEcCCcccCCCHHHHHHHHHh----cCCHHHHHHHHHHHHHh
Q 023551 200 FGDKSLKMH---------LSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKN----IKDARSAARHLTEEALA 266 (281)
Q Consensus 200 lG~~~~~~~---------v~~~p~i~~~~l~~~~~~llL~SDGl~d~l~~~ei~~i~~~----~~~~~~~a~~l~~~a~~ 266 (281)
||+..||.. |++-|+|....|++.++|+|+++||||++|+.++++++++. ......+|+.|++.++.
T Consensus 403 ~GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLA 482 (542)
T KOG0699|consen 403 FGDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLA 482 (542)
T ss_pred hhhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcC
Confidence 999999974 78899999999999999999999999999999999988764 46778899999999987
Q ss_pred cC------CCCCcEEEEEEeC
Q 023551 267 RN------SSDDISCVVVKFN 281 (281)
Q Consensus 267 ~~------~~Dn~Tvivv~~~ 281 (281)
.. ..||+|+|++.|+
T Consensus 483 p~T~GDGTGCDNMT~ii~~Fk 503 (542)
T KOG0699|consen 483 PSTDGDGTGCDNMTVIITTFK 503 (542)
T ss_pred CCCCCCCcCCCcceEEEEEec
Confidence 43 4699999999885
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-32 Score=236.08 Aligned_cols=209 Identities=36% Similarity=0.478 Sum_probs=167.5
Q ss_pred CCCeEEEEEEeCCCCchHHHHHHHHHHHHHHcC-------------CC--------------------C-CCCHHHHHHH
Q 023551 60 ENELGLFAIFDGHLSHEIPDFLRTHLFENILNE-------------PN--------------------F-WQDPESAVRR 105 (281)
Q Consensus 60 ~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~-------------~~--------------------~-~~~~~~~l~~ 105 (281)
.++..|+||+|||||.++++++++.++.++..+ .. . .....+.|.+
T Consensus 96 ~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~ 175 (390)
T KOG0700|consen 96 ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSK 175 (390)
T ss_pred cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHH
Confidence 467789999999999999999999999877610 00 1 3456789999
Q ss_pred HHHHHhHHHHHhhccc------CCCCccEEEEEEEeCCEEEEEEcCCceEEEEe---CC---eeeeCCCCCCCCc--HHH
Q 023551 106 AYCITDTTILEKAVDL------GKGGSTAVTAILINCEKLVVANVGDSRAVICK---NG---VAKQLSVDHEPSS--ERE 171 (281)
Q Consensus 106 ~~~~~~~~l~~~~~~~------~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~r---~~---~~~~lt~dh~~~~--e~~ 171 (281)
||.++++.+....... -..+|+++++.++.++.+|++|+||||++|.+ ++ ...|||.||+..+ |++
T Consensus 176 Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~ 255 (390)
T KOG0700|consen 176 AFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVR 255 (390)
T ss_pred HHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHH
Confidence 9999999987554221 13456666666888999999999999999854 33 5789999999985 888
Q ss_pred HHHhCCCeEEcC-CCCCCccCCeeeccccccCccccC---------------------CccCCCceEEEEcCCCCeEEEE
Q 023551 172 HIEGRGGFVSNF-PGDVPRVDGQLAVARAFGDKSLKM---------------------HLSSEPHVVMETIDDDTEFIIL 229 (281)
Q Consensus 172 rl~~~g~~~~~~-~~~~~~~~~~~~ltralG~~~~~~---------------------~v~~~p~i~~~~l~~~~~~llL 229 (281)
||+..+..-+.. -..+.|..|.+.+||||||..+|. +++++|.+..++|.+.+.||||
T Consensus 256 Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIl 335 (390)
T KOG0700|consen 256 RIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLIL 335 (390)
T ss_pred HHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEE
Confidence 999886522211 122369999999999999999884 5789999999999999999999
Q ss_pred EcCCcccCCCHHHHHHHHHhc----CCHHHHHHHHHHHHHhcC
Q 023551 230 ASDGLWKVMSNQDAADAIKNI----KDARSAARHLTEEALARN 268 (281)
Q Consensus 230 ~SDGl~d~l~~~ei~~i~~~~----~~~~~~a~~l~~~a~~~~ 268 (281)
+|||+|++|+++|++.++... ..-+.+|+.|++.|+.+.
T Consensus 336 ASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~a 378 (390)
T KOG0700|consen 336 ASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRA 378 (390)
T ss_pred eccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhh
Confidence 999999999999999999773 334678999999998754
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.95 E-value=5.5e-27 Score=195.49 Aligned_cols=221 Identities=29% Similarity=0.437 Sum_probs=170.5
Q ss_pred CCCeEEEEEEeCCCCchHHHHHHHHHHHHHHcCC--------------------------------------CCC--CCH
Q 023551 60 ENELGLFAIFDGHLSHEIPDFLRTHLFENILNEP--------------------------------------NFW--QDP 99 (281)
Q Consensus 60 ~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~--------------------------------------~~~--~~~ 99 (281)
..+..+|.+||||.|+.+|-.|++.+...+.+.. ... .-.
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 3456899999999999999998887666554310 000 113
Q ss_pred HHHHHHHHHHHhHHHHHhhcccCCCCccEEEEEEEeCCEEEEEEcCCceEEEEeCCeeeeCCCCCCCCcHHHHHHhCCCe
Q 023551 100 ESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGF 179 (281)
Q Consensus 100 ~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l~r~~~~~~lt~dh~~~~e~~rl~~~g~~ 179 (281)
.-+|..+|+++++++.+........||||+++++.--+++|++|.||||++++|+++++.++++.++..||+||+..+..
T Consensus 221 iGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPetERqRlQ~Laf~ 300 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPETERQRLQELAFR 300 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcHHHHHHHHHHhhc
Confidence 46789999999999988776666678888887887799999999999999999999999999999999999999887653
Q ss_pred EEcCC--------------------------------------------------CCCCccCCeeeccccccCccccC--
Q 023551 180 VSNFP--------------------------------------------------GDVPRVDGQLAVARAFGDKSLKM-- 207 (281)
Q Consensus 180 ~~~~~--------------------------------------------------~~~~~~~~~~~ltralG~~~~~~-- 207 (281)
.++.- +.-.|.-+...+||-|||..++.
T Consensus 301 ~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv~d 380 (493)
T KOG1323|consen 301 NPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKVVD 380 (493)
T ss_pred ChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceeeeec
Confidence 33310 00112223467899999988763
Q ss_pred -------CccCCCceEEEEcCC----CCeEEEEEcCCcccCCCHHHHHHHHHhc------CCH---HHHHHHHHHHHHh-
Q 023551 208 -------HLSSEPHVVMETIDD----DTEFIILASDGLWKVMSNQDAADAIKNI------KDA---RSAARHLTEEALA- 266 (281)
Q Consensus 208 -------~v~~~p~i~~~~l~~----~~~~llL~SDGl~d~l~~~ei~~i~~~~------~~~---~~~a~~l~~~a~~- 266 (281)
.+++.|++....+.. .+|.+||+|||+||.++++|+..+++.. .+| ..+|+.|+..|..
T Consensus 381 snl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~arg~ 460 (493)
T KOG1323|consen 381 SNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAARGQ 460 (493)
T ss_pred CCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcCc
Confidence 467889999888763 3789999999999999999999988764 233 4678888887743
Q ss_pred ------------cCCCCCcEEEEEEe
Q 023551 267 ------------RNSSDDISCVVVKF 280 (281)
Q Consensus 267 ------------~~~~Dn~Tvivv~~ 280 (281)
.|+.|||||.||-+
T Consensus 461 ~k~rgWr~~n~~lgSgDDIsVfVIPL 486 (493)
T KOG1323|consen 461 QKDRGWRMNNGGLGSGDDISVFVIPL 486 (493)
T ss_pred cCCCceeccCCCcCCCCceEEEEEec
Confidence 24689999999865
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.95 E-value=1.9e-25 Score=186.07 Aligned_cols=197 Identities=21% Similarity=0.220 Sum_probs=139.5
Q ss_pred CCCCeeEeeecccCCCCeEEEEEEeCCCCc--------hHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhHHHHHh
Q 023551 46 PMEDYVVAQFKQVDENELGLFAIFDGHLSH--------EIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITDTTILEK 117 (281)
Q Consensus 46 ~neD~~~~~~~~~~~~~~~l~~V~DG~GG~--------~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~ 117 (281)
.-||++++.. +....+.|||||+||| ..++...+.+.+.+.+......++...|.+++.++-++
T Consensus 90 ~GEDa~Fvss----~~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~~---- 161 (330)
T KOG1379|consen 90 GGEDAWFVSS----NPHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELKSQ---- 161 (330)
T ss_pred CCCcceeecc----CcccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHhhc----
Confidence 5799999643 2567899999999999 23333344444444444455557888888877654332
Q ss_pred hcccCCCCccEEEEEEEe-CCEEEEEEcCCceEEEEeCCeeeeCCCCCCCCcHHHHHHhCCCeEEcCCCCCCccCCeeec
Q 023551 118 AVDLGKGGSTAVTAILIN-CEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVPRVDGQLAV 196 (281)
Q Consensus 118 ~~~~~~~~~tt~~~~~i~-~~~~~~~~vGDsr~~l~r~~~~~~lt~dh~~~~e~~rl~~~g~~~~~~~~~~~~~~~~~~l 196 (281)
+...-+++|++++++-. +++||++|+|||.+.++|+|++..-|..+... .|...+|
T Consensus 162 -~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~----------------------FN~PyQL 218 (330)
T KOG1379|consen 162 -KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHY----------------------FNTPYQL 218 (330)
T ss_pred -CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheec----------------------cCCceee
Confidence 11112455555544433 88999999999999999999999888866321 1111122
Q ss_pred -------cccccCccccCCccCCCceEEEEcCCCCeEEEEEcCCcccCCCHHHHHHHHHh-----cCCHHHHHHHHHHHH
Q 023551 197 -------ARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKN-----IKDARSAARHLTEEA 264 (281)
Q Consensus 197 -------tralG~~~~~~~v~~~p~i~~~~l~~~~~~llL~SDGl~d~l~~~ei~~i~~~-----~~~~~~~a~~l~~~a 264 (281)
..++++. +-..+...+.+++ ||.|||+||||||++.+++|..++.. ..+++..|+.|++.|
T Consensus 219 s~~p~~~~~~~~d~------p~~ad~~~~~v~~-GDvIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~A 291 (330)
T KOG1379|consen 219 SSPPEGYSSYISDV------PDSADVTSFDVQK-GDVIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKA 291 (330)
T ss_pred ccCCccccccccCC------ccccceEEEeccC-CCEEEEecccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHH
Confidence 2223433 3566889999999 99999999999999999999999865 357899999999888
Q ss_pred Hhc-----------------------CCCCCcEEEEEEe
Q 023551 265 LAR-----------------------NSSDDISCVVVKF 280 (281)
Q Consensus 265 ~~~-----------------------~~~Dn~Tvivv~~ 280 (281)
.+. |..||||+||..+
T Consensus 292 r~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 292 RELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred HHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 642 4589999999753
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.91 E-value=7.3e-24 Score=197.66 Aligned_cols=251 Identities=23% Similarity=0.352 Sum_probs=206.5
Q ss_pred CCCCccCCCceeEEEEeecCCCCCCCCCeeEeeecccCCCCeEEEEEEeCCCCchHHHHHHHHHHHHHHcCCCCCCCHHH
Q 023551 22 GKGKSKMKKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPES 101 (281)
Q Consensus 22 ~~~~~~~~~~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~ 101 (281)
.+..+.....|++|++...|.|.+ +--+.. ++..+-++....||++||-+..+..++....+...+.++.....+-..
T Consensus 512 ~~d~~~n~~~~t~Gv~~~~gqrnk-~c~~~~-~v~nf~~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~ 589 (1081)
T KOG0618|consen 512 TPDGNVNAFLWTYGVAGVSGQRNK-VCSRAV-WVENFFLNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETE 589 (1081)
T ss_pred CCccccceeheeeccchhcccccc-hhhhhh-hhhhcccCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHH
Confidence 344444557889999999999884 322222 222223455689999999999999999999988888876655555556
Q ss_pred HHHHHHHHHhHHHHHhhcccCCCCccEEEEEEEeC-------CEEEEEEcCCceEEEEeCCeeeeCCCCCCCC---cHHH
Q 023551 102 AVRRAYCITDTTILEKAVDLGKGGSTAVTAILINC-------EKLVVANVGDSRAVICKNGVAKQLSVDHEPS---SERE 171 (281)
Q Consensus 102 ~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~~-------~~~~~~~vGDsr~~l~r~~~~~~lt~dh~~~---~e~~ 171 (281)
.|+.+|...++++...+.. .++..+.+-+..+ .++++||+|+|.++++++|+..++|+-.... +|.+
T Consensus 590 ~mr~~fl~~~rklg~~g~~---lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~ 666 (1081)
T KOG0618|consen 590 QMRNTFLRLNRKLGEEGQV---LGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYK 666 (1081)
T ss_pred HHHHHHHHHhhhhhhhhcc---ccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHH
Confidence 6999999999999655442 3444444433332 3689999999999999999988888865333 4999
Q ss_pred HHHhCCCeEEcCCCCCCccCCeeeccccccCccccCCccCCCceEEEEcCCCCeEEEEEcCCcccCCCHHHHHHHHHhcC
Q 023551 172 HIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIK 251 (281)
Q Consensus 172 rl~~~g~~~~~~~~~~~~~~~~~~ltralG~~~~~~~v~~~p~i~~~~l~~~~~~llL~SDGl~d~l~~~ei~~i~~~~~ 251 (281)
|++..+|++.+ ..+.+|+...||++|...+.|.|.+.|++....|.+.+++||+++-++|++|+.+++.+++++..
T Consensus 667 RI~~~~g~i~e----d~k~ngvt~~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~ 742 (1081)
T KOG0618|consen 667 RIVDSKGFITE----DNKLNGVTSSTRAIGPFSLFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVE 742 (1081)
T ss_pred HHHHhcCeecC----CCeeeceeeeeeecccccccccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCC
Confidence 99999999995 35888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCCCCcEEEEEEeC
Q 023551 252 DARSAARHLTEEALARNSSDDISCVVVKFN 281 (281)
Q Consensus 252 ~~~~~a~~l~~~a~~~~~~Dn~Tvivv~~~ 281 (281)
+|-.+|++|++.|.++|+.||++|+||++.
T Consensus 743 dpL~AAkKL~d~AqSYgc~~nv~vlVv~l~ 772 (1081)
T KOG0618|consen 743 DPLLAAKKLCDLAQSYGCAENVSVLVVRLN 772 (1081)
T ss_pred chHHHHHHHHHHHHhcccccCeeEEEEEee
Confidence 999999999999999999999999999874
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.87 E-value=3e-21 Score=159.73 Aligned_cols=178 Identities=19% Similarity=0.236 Sum_probs=95.8
Q ss_pred EeecCCCCCCCCCeeEeeecccCCCCeEEEEEEeCCCCchHHHHHHHHHH----HHHHcCCCCCCC--HHHHHHHHHHHH
Q 023551 37 HLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLF----ENILNEPNFWQD--PESAVRRAYCIT 110 (281)
Q Consensus 37 ~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~----~~~~~~~~~~~~--~~~~l~~~~~~~ 110 (281)
.++.|.+. .|||++.+... .+..+++|+||+||...+..+++.++ +.+......... ....++.+...+
T Consensus 3 ~sh~~~~~-~nqD~~~~~~~----~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 77 (212)
T PF13672_consen 3 RSHRGRGA-PNQDAFGIRTD----DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEI 77 (212)
T ss_dssp ----TTSS-S--EEEEEE-T----CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCC-CCCCCEEeeeC----CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH
Confidence 36777777 89999985332 33456699999998866555555444 444443322211 112223232232
Q ss_pred hHHH-----HHhhcccCCCCccEEEEEEEeCCEEEEEEcCCceEEE-EeCCeeeeCCCCCCCCcHHHHHHhCCCeEEcCC
Q 023551 111 DTTI-----LEKAVDLGKGGSTAVTAILINCEKLVVANVGDSRAVI-CKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFP 184 (281)
Q Consensus 111 ~~~l-----~~~~~~~~~~~~tt~~~~~i~~~~~~~~~vGDsr~~l-~r~~~~~~lt~dh~~~~e~~rl~~~g~~~~~~~ 184 (281)
...+ ..........++||++++++.++.++++|+||||+|+ .++|++.+++.+|+. +. .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~--~~---~---------- 142 (212)
T PF13672_consen 78 LSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSG--EY---P---------- 142 (212)
T ss_dssp HHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BH--HH---H----------
T ss_pred HHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccc--hh---h----------
Confidence 2221 1111223467899999999999999999999999965 689999999999952 11 0
Q ss_pred CCCCccCCeeeccccccCccccCCccCCCceEEEEcCCCCeEEEEEcCCcccCCCHHH-HHHHHHh
Q 023551 185 GDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQD-AADAIKN 249 (281)
Q Consensus 185 ~~~~~~~~~~~ltralG~~~~~~~v~~~p~i~~~~l~~~~~~llL~SDGl~d~l~~~e-i~~i~~~ 249 (281)
..++.+..... ....++..+++.+ ++.|+|||||||+.+...+ +..++..
T Consensus 143 ----------~~~~~~~~~~~----~~~~~~~~~~~~~-~d~ilL~SDG~~~~l~~~~~~~~~l~~ 193 (212)
T PF13672_consen 143 ----------NQTRSLTGDDP----EPDVQYGSIPLEE-GDVILLCSDGVWDNLRSYEDLEQFLKD 193 (212)
T ss_dssp ----------HCTTSCCHHCC----CTETEEEEEE--T-T-EEEEE-HHHHTTS-HHHHHHHH---
T ss_pred ----------hhhhccCcccc----ccCCeEEEEEcCC-CCEEEEECcCccccCCCHHHHHHHhhh
Confidence 01222222210 2334666677777 8999999999999998665 6666654
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.83 E-value=3.3e-18 Score=139.42 Aligned_cols=184 Identities=15% Similarity=0.077 Sum_probs=134.6
Q ss_pred eeEEEEeecCCCCCCCCCeeEeeecccCCCCeEEEEEEeCCCCchHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHh
Q 023551 32 VTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITD 111 (281)
Q Consensus 32 ~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 111 (281)
+.++.....+.. ...|.+.+... .++..+++|+||||+...|..++..+...+.+...... .+.+.+..++
T Consensus 4 ~~~~~~~~p~~~--~~GD~~~~~~~---~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~----~~~~~l~~~n 74 (193)
T smart00331 4 GLIAQYYEDATQ--VGGDFYDVVKL---PEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGI----SLSQILERLN 74 (193)
T ss_pred eEEEEEEcchHh--cCccEEEEEEe---CCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCC----CHHHHHHHHH
Confidence 455555555553 48898865432 24468999999999998888888888777765432222 2556677777
Q ss_pred HHHHHhhcccCCCCccEEEEEEE--eCCEEEEEEcCCceEEEEe-CCeeeeCCCCCCCCcHHHHHHhCCCeEEcCCCCCC
Q 023551 112 TTILEKAVDLGKGGSTAVTAILI--NCEKLVVANVGDSRAVICK-NGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVP 188 (281)
Q Consensus 112 ~~l~~~~~~~~~~~~tt~~~~~i--~~~~~~~~~vGDsr~~l~r-~~~~~~lt~dh~~~~e~~rl~~~g~~~~~~~~~~~ 188 (281)
+.+.... ....++|++++++ ..++++++|+||+|+|+++ ++...+++.+.
T Consensus 75 ~~l~~~~---~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~------------------------ 127 (193)
T smart00331 75 RAIYENG---EDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL------------------------ 127 (193)
T ss_pred HHHHhcC---CCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC------------------------
Confidence 7776652 2346788877777 5789999999999999998 55555454432
Q ss_pred ccCCeeeccccccCccccCCccCCCceEEEEcCCCCeEEEEEcCCcccCCCHHHHHHHHHhc--CCHHHHHHHHHHHHH
Q 023551 189 RVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNI--KDARSAARHLTEEAL 265 (281)
Q Consensus 189 ~~~~~~~ltralG~~~~~~~v~~~p~i~~~~l~~~~~~llL~SDGl~d~l~~~ei~~i~~~~--~~~~~~a~~l~~~a~ 265 (281)
++.+|... ..+++...+++.+ +|.|+|+|||+|+.+.++++.+++++. .++++.++++++.+.
T Consensus 128 --------~~~lG~~~-----~~~~~~~~~~l~~-gd~l~l~TDGl~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 128 --------GAPLGLEP-----DVEVDVRELTLEP-GDLLLLYTDGLTEARNPERLEELLEELLGSPPAEIAQRILEELL 192 (193)
T ss_pred --------CceeeeCC-----CCcceeEEEeeCC-CCEEEEECCCccccCChHHHHHHHHHhcCCCHHHHHHHHHHHHh
Confidence 23455443 3457788889999 899999999999999999999998875 468888888887654
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.75 E-value=2.5e-16 Score=151.52 Aligned_cols=186 Identities=16% Similarity=0.125 Sum_probs=133.8
Q ss_pred CCCCeeEeeecccCCCCeEEEEEEeCCCCchHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhHHHHHhhcccCCCC
Q 023551 46 PMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITDTTILEKAVDLGKGG 125 (281)
Q Consensus 46 ~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 125 (281)
.+.|.+.+... +++..+++|+||+|+...|..++..+.+.+.+......+ ...++..+|+.+..... ...
T Consensus 566 vsGD~y~~~~l---~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~----~~~ai~~lN~~L~~~~~---~~~ 635 (764)
T TIGR02865 566 VSGDSYSFGKL---SAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFD----REVAIKTVNSILSLRST---DEK 635 (764)
T ss_pred ccCceEEEEEE---CCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHhCCC---CCe
Confidence 79999865332 245678999999998877777766655544321111112 35567777777654322 235
Q ss_pred ccEEEEEEEe--CCEEEEEEcCCceEEEEeCCeeeeCCCCCCCCcHHHHHHhCCCeEEcCCCCCCccCCeeeccccccCc
Q 023551 126 STAVTAILIN--CEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDK 203 (281)
Q Consensus 126 ~tt~~~~~i~--~~~~~~~~vGDsr~~l~r~~~~~~lt~dh~~~~e~~rl~~~g~~~~~~~~~~~~~~~~~~ltralG~~ 203 (281)
.+|+.+++++ .+++.++++|+++.|+.|++.+.+++..+.+ +|-.
T Consensus 636 faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP---------------------------------lGil 682 (764)
T TIGR02865 636 FSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP---------------------------------IGIL 682 (764)
T ss_pred EEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce---------------------------------eEec
Confidence 6787777775 6889999999999999999988877654421 2221
Q ss_pred cccCCccCCCceEEEEcCCCCeEEEEEcCCcccCCCHHH-----HHHHHHh--cCCHHHHHHHHHHHHHhcC---CCCCc
Q 023551 204 SLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQD-----AADAIKN--IKDARSAARHLTEEALARN---SSDDI 273 (281)
Q Consensus 204 ~~~~~v~~~p~i~~~~l~~~~~~llL~SDGl~d~l~~~e-----i~~i~~~--~~~~~~~a~~l~~~a~~~~---~~Dn~ 273 (281)
. ..+++....++.+ ||+|+++|||++|..++.+ +.++++. ..+|++.++.|++.+.... ..||+
T Consensus 683 ~-----~~~~~~~~~~L~~-GD~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~~~~~~DD~ 756 (764)
T TIGR02865 683 D-----EVDVELVRKKLKN-GDLIVMVSDGVLEGEKEVEGKVLWLVRKLKETNTNDPEEIAEYLLEKAKELRSGKIKDDM 756 (764)
T ss_pred c-----CCccceEEEEeCC-CCEEEEECCCCCcCCcccccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCCCCCCCe
Confidence 1 3456778889999 9999999999999876433 6677764 3589999999999998643 47999
Q ss_pred EEEEEEe
Q 023551 274 SCVVVKF 280 (281)
Q Consensus 274 Tvivv~~ 280 (281)
|++++++
T Consensus 757 Tvlvirv 763 (764)
T TIGR02865 757 TVIVAKV 763 (764)
T ss_pred EEEEEEe
Confidence 9999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.64 E-value=6.6e-14 Score=113.93 Aligned_cols=176 Identities=14% Similarity=0.119 Sum_probs=114.4
Q ss_pred CCeEEEEEEeCCCCchHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhHHHHHhhcccCCCCccEEEEEEEe--CCE
Q 023551 61 NELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILIN--CEK 138 (281)
Q Consensus 61 ~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~--~~~ 138 (281)
++..++.|+|+.|..-.|.+.+..+...+........+ ..+.+..+|+.+....... ...+|++++.++ .++
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~ 75 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGT 75 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTE
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceE
Confidence 45688999999997766666555544444322111112 4556667777775443322 244555555554 678
Q ss_pred EEEEEcCCceEEEEeCC--eeeeCCCCCCCCcHHHHHHhCCCeEEcCCCCCCccCCeeeccccccCccccCCccCCCceE
Q 023551 139 LVVANVGDSRAVICKNG--VAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVV 216 (281)
Q Consensus 139 ~~~~~vGDsr~~l~r~~--~~~~lt~dh~~~~e~~rl~~~g~~~~~~~~~~~~~~~~~~ltralG~~~~~~~v~~~p~i~ 216 (281)
++++|+|++++++++++ ....+..... .+|-.. ...+...
T Consensus 76 l~~~~aG~~~~l~~~~~~~~~~~~~~~~~---------------------------------~lG~~~-----~~~~~~~ 117 (193)
T PF07228_consen 76 LTYANAGHPPPLLLRPGGREIEQLESEGP---------------------------------PLGIFE-----DIDYQEQ 117 (193)
T ss_dssp EEEEEESSSEEEEEETTCTEEEEETCSSB---------------------------------BCSSSC-----TTCEEEE
T ss_pred EEEeCCCCCCEEEEeccccceeecccCcc---------------------------------ceeeec-----cccccce
Confidence 99999999999999983 3333322221 144333 3456677
Q ss_pred EEEcCCCCeEEEEEcCCcccCCCHH-------HHHHHHHh--cCCHHHHHHHHHHHHHhc---CCCCCcEEEEEEeC
Q 023551 217 METIDDDTEFIILASDGLWKVMSNQ-------DAADAIKN--IKDARSAARHLTEEALAR---NSSDDISCVVVKFN 281 (281)
Q Consensus 217 ~~~l~~~~~~llL~SDGl~d~l~~~-------ei~~i~~~--~~~~~~~a~~l~~~a~~~---~~~Dn~Tvivv~~~ 281 (281)
.+++.+ |+.|+|+|||+++....+ .+.+.+.+ ..++++.++.|++.+... ...||+|+++++++
T Consensus 118 ~~~l~~-gd~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 118 EIQLEP-GDRLLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp EEE--T-TEEEEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE-
T ss_pred EEEecc-ccEEEEeCCChhhccCCccchhHHHHHHHHHhhccCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEEC
Confidence 888999 999999999999998543 33566653 367999999999988873 47899999999975
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.76 E-value=3.9e-06 Score=75.24 Aligned_cols=187 Identities=14% Similarity=0.045 Sum_probs=119.0
Q ss_pred CCCCeeEeeecccCCCCeEEEEEEeCCCCchHHHHHHHHHHHHHHcCCCC-CCCHHHHHHHHHHHHhHHHHHhhcccCCC
Q 023551 46 PMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNF-WQDPESAVRRAYCITDTTILEKAVDLGKG 124 (281)
Q Consensus 46 ~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 124 (281)
..-|.|-+... +.....++|.|..|-.-.|.+.+......+...... ..++ ...+..+|+.+.......
T Consensus 161 vGGD~yd~~~~---~~~~~~i~I~DvsG~Gv~aal~m~~~~~~~~~~~~~~~~~p----~~~l~~~n~~~~~~~~~~--- 230 (367)
T COG2208 161 VGGDYYDFIQL---GEKRLRIGIGDVSGKGVPAALLMLMPKLALRLLLESGPLDP----ADVLETLNRVLKQNLEED--- 230 (367)
T ss_pred cCCceEEEEEE---CCcEEEEEEEeccCCCHHHHHHHHHHHHHHHHhhhcccCCH----HHHHHHHHHHHHhcccCC---
Confidence 35566654333 235688899999884433333333222222221111 2223 345555566665544322
Q ss_pred CccEEEEEEEe--CCEEEEEEcCCceEEEEeCCee---eeCCCCCCCCcHHHHHHhCCCeEEcCCCCCCccCCeeecccc
Q 023551 125 GSTAVTAILIN--CEKLVVANVGDSRAVICKNGVA---KQLSVDHEPSSEREHIEGRGGFVSNFPGDVPRVDGQLAVARA 199 (281)
Q Consensus 125 ~~tt~~~~~i~--~~~~~~~~vGDsr~~l~r~~~~---~~lt~dh~~~~e~~rl~~~g~~~~~~~~~~~~~~~~~~ltra 199 (281)
.-+|+...+++ .+.+.++++|.--.++++.+.. ..++ .....
T Consensus 231 ~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~---------------------------------~~g~p 277 (367)
T COG2208 231 MFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLT---------------------------------ALGLP 277 (367)
T ss_pred cEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEcc---------------------------------CCCce
Confidence 56666666665 6789999999999998887542 2111 22344
Q ss_pred ccCccccCCccCCCceEEEEcCCCCeEEEEEcCCccc-------CCCHHHHHHHHH--hcCCHHHHHHHHHHHHHhc---
Q 023551 200 FGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWK-------VMSNQDAADAIK--NIKDARSAARHLTEEALAR--- 267 (281)
Q Consensus 200 lG~~~~~~~v~~~p~i~~~~l~~~~~~llL~SDGl~d-------~l~~~ei~~i~~--~~~~~~~~a~~l~~~a~~~--- 267 (281)
+|-.. ...+.+...++.+ ||.+++.|||+.+ .+..+...+++. ...++++.++.+.+.....
T Consensus 278 iG~~~-----~~~~~~~~~~l~~-gd~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~~~ 351 (367)
T COG2208 278 IGLLP-----DYQYEVASLQLEP-GDLLVLYTDGVTEARNSDGEFFGLERLLKILGRLLGQPAEEILEAILESLEELQGD 351 (367)
T ss_pred eeecC-----CccchheeEEecC-CCEEEEEcCCeeeeecCCccEecHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhCC
Confidence 55544 5677788889999 9999999999999 555666677666 3367888888888877653
Q ss_pred -CCCCCcEEEEEEeC
Q 023551 268 -NSSDDISCVVVKFN 281 (281)
Q Consensus 268 -~~~Dn~Tvivv~~~ 281 (281)
...||+|+++++++
T Consensus 352 ~~~~DDiTll~lk~~ 366 (367)
T COG2208 352 QIQDDDITLLVLKVK 366 (367)
T ss_pred ccccCceEEEEEEec
Confidence 34688999999874
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=83.04 E-value=18 Score=31.50 Aligned_cols=100 Identities=9% Similarity=0.031 Sum_probs=56.1
Q ss_pred CCCeeEeeecccCCCCeEEEEEEe--CCCCch-HHHHHHHHHHHHHHcCC-----CCCCCHHHHHHHHHHHHhHHHHHhh
Q 023551 47 MEDYVVAQFKQVDENELGLFAIFD--GHLSHE-IPDFLRTHLFENILNEP-----NFWQDPESAVRRAYCITDTTILEKA 118 (281)
Q Consensus 47 neD~~~~~~~~~~~~~~~l~~V~D--G~GG~~-~a~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~l~~~~ 118 (281)
.-|.+-+... +++...|.++| |||++. .|......++..++... ....+ ....+..+|+.+....
T Consensus 150 ~GD~~d~~~l---~~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~----p~~~l~~lN~~l~~~~ 222 (303)
T PRK10693 150 PGLVLDIAAL---SDNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPE----LGALLKQVNHLLRQAN 222 (303)
T ss_pred CccEEeeeec---CCCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCC----HHHHHHHHHHHHHhcC
Confidence 5566543222 24456777878 888774 34444555455444321 11112 3556667777776653
Q ss_pred cccCCCCccEEEEEEEe--CCEEEEEEcCCceEEEEeCCee
Q 023551 119 VDLGKGGSTAVTAILIN--CEKLVVANVGDSRAVICKNGVA 157 (281)
Q Consensus 119 ~~~~~~~~tt~~~~~i~--~~~~~~~~vGDsr~~l~r~~~~ 157 (281)
... . .|+...+++ .+.+.+++.|....++..++.+
T Consensus 223 ~~~---~-~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 223 LPG---Q-FPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred CCc---e-eeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 211 2 345545554 5689999999999885444443
No 21
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=60.73 E-value=5.8 Score=26.47 Aligned_cols=20 Identities=15% Similarity=0.404 Sum_probs=15.4
Q ss_pred cCCCCeEEEEEcCCcccCCC
Q 023551 220 IDDDTEFIILASDGLWKVMS 239 (281)
Q Consensus 220 l~~~~~~llL~SDGl~d~l~ 239 (281)
+...|..+++++||+|=.+.
T Consensus 23 l~~~G~Rllva~nGv~lEv~ 42 (72)
T PF09436_consen 23 LERPGHRLLVASNGVFLEVR 42 (72)
T ss_pred cccCCcEEEEecCcEEEEEe
Confidence 34348999999999996544
No 22
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=47.57 E-value=15 Score=26.01 Aligned_cols=27 Identities=11% Similarity=0.382 Sum_probs=22.7
Q ss_pred CeEEEEEcCCcccCCCHHHHHHHHHhc
Q 023551 224 TEFIILASDGLWKVMSNQDAADAIKNI 250 (281)
Q Consensus 224 ~~~llL~SDGl~d~l~~~ei~~i~~~~ 250 (281)
+|-++|+.||++-.+...+..+-++..
T Consensus 25 ~D~vlL~qdGV~aAl~~~~~~~sl~~~ 51 (96)
T COG2168 25 GDAVLLLQDGVYAALKGNRYLASLRES 51 (96)
T ss_pred cCeEEEEcccchhhhcCcHHHHHHhcC
Confidence 888999999999999888777766653
No 23
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=37.63 E-value=67 Score=25.74 Aligned_cols=45 Identities=22% Similarity=0.454 Sum_probs=31.6
Q ss_pred CeEEEEEcCCccc-----------CCCHHHHHHHHHh----cCCHHHHHHHHHHHHHhcC
Q 023551 224 TEFIILASDGLWK-----------VMSNQDAADAIKN----IKDARSAARHLTEEALARN 268 (281)
Q Consensus 224 ~~~llL~SDGl~d-----------~l~~~ei~~i~~~----~~~~~~~a~~l~~~a~~~~ 268 (281)
+|.+|..|.|+|. +|.++..=+.+.. ..-|.+.|+.|++.-.+||
T Consensus 71 DDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 71 DDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 6789999999985 3333433333332 2468999999999888876
No 24
>PRK02391 heat shock protein HtpX; Provisional
Probab=27.01 E-value=66 Score=27.97 Aligned_cols=37 Identities=8% Similarity=0.230 Sum_probs=27.0
Q ss_pred CceEEEEcCCCCeEEEEEcCCcccCCCHHHHHHHHHhc
Q 023551 213 PHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNI 250 (281)
Q Consensus 213 p~i~~~~l~~~~~~llL~SDGl~d~l~~~ei~~i~~~~ 250 (281)
|.-......+ ...+|+.|||+.+.++++|+..++.++
T Consensus 104 ~NAfa~G~~~-~~~~V~vt~gLl~~L~~~El~aVlaHE 140 (296)
T PRK02391 104 PNAFATGRSP-KNAVVCVTTGLMRRLDPDELEAVLAHE 140 (296)
T ss_pred CceEEecCCC-CCcEEEecHHHHhhCCHHHHHHHHHHH
Confidence 3333333333 456789999999999999999888664
No 25
>PF14014 DUF4230: Protein of unknown function (DUF4230)
Probab=26.99 E-value=2.8e+02 Score=21.04 Aligned_cols=40 Identities=20% Similarity=0.354 Sum_probs=28.4
Q ss_pred cCCCceEEEEcCCCCeEEEEEcCCcccCCCHHHHHHHHHh
Q 023551 210 SSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKN 249 (281)
Q Consensus 210 ~~~p~i~~~~l~~~~~~llL~SDGl~d~l~~~ei~~i~~~ 249 (281)
.|.|.+....++...--++-...|+|..++.++..++.+.
T Consensus 75 LP~~~i~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (157)
T PF14014_consen 75 LPPPEILSVEIDEDSIKVYDEKGGWFNPITPEDQNEAQKE 114 (157)
T ss_pred CCCcEEeeeecCccceEEEEccCCccCCCCHHHHHHHHHH
Confidence 4678888888886344455688888888887776666544
No 26
>PRK05457 heat shock protein HtpX; Provisional
Probab=26.80 E-value=82 Score=27.20 Aligned_cols=37 Identities=14% Similarity=0.210 Sum_probs=27.9
Q ss_pred CceEEEEcCCCCeEEEEEcCCcccCCCHHHHHHHHHhc
Q 023551 213 PHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNI 250 (281)
Q Consensus 213 p~i~~~~l~~~~~~llL~SDGl~d~l~~~ei~~i~~~~ 250 (281)
|.-....... ...+|+.|+|+.+.++++|+..++.++
T Consensus 105 ~NAfa~G~~~-~~~~V~vt~gLl~~L~~~El~aVlAHE 141 (284)
T PRK05457 105 INAFATGASK-NNSLVAVSTGLLQNMSRDEVEAVLAHE 141 (284)
T ss_pred ceEEEecCCC-CCeEEEeehHHhhhCCHHHHHHHHHHH
Confidence 4444444444 567899999999999999999888664
No 27
>TIGR00722 ttdA_fumA_fumB hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region. A number of Fe-S cluster-containing hydro-lyases share a conserved motif, including argininosuccinate lyase, adenylosuccinate lyase, aspartase, class I fumarate hydratase (fumarase), and tartrate dehydratase. This model represents a subset of closely related proteins or modules, including the E. coli tartrate dehydratase alpha chain and the N-terminal region of the class I fumarase (where the C-terminal region is homologous to the tartrate dehydratase beta chain). The activity of archaeal proteins in this subfamily has not been established.
Probab=26.01 E-value=2.4e+02 Score=24.23 Aligned_cols=69 Identities=14% Similarity=0.125 Sum_probs=35.0
Q ss_pred eCCCCc--hHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhHHHHHhhccc-CCCCccEEEEEEEeCCEEEEEE
Q 023551 70 DGHLSH--EIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITDTTILEKAVDL-GKGGSTAVTAILINCEKLVVAN 143 (281)
Q Consensus 70 DG~GG~--~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~tt~~~~~i~~~~~~~~~ 143 (281)
=|.||. .++.++-+.+++.+-+. ..+ ..+.+.-+++.+.+-+..... +.+|.||+..+.+.....|.+.
T Consensus 183 VGIGGt~d~aa~LaK~Allr~ig~~---n~d--~~~a~lE~elle~iN~lGIGp~GlGG~tTal~V~Ie~~p~H~As 254 (273)
T TIGR00722 183 VGIGGSFETAAKLAKKALLRPIGER---HPN--PKIAKLELELLEEINSLGIGPMGLGGKTTALDVKIESAHCHTAS 254 (273)
T ss_pred EEeCCCHHHHHHHHHHHhhhhhccC---CCC--hhHHHHHHHHHHHHHhcCcCCCccCCCeEEEEEEEeecCCcccC
Confidence 367776 44555555555443211 112 223333344444444444333 4678899998888655444443
No 28
>PRK03982 heat shock protein HtpX; Provisional
Probab=24.85 E-value=91 Score=26.89 Aligned_cols=27 Identities=7% Similarity=0.348 Sum_probs=22.7
Q ss_pred CeEEEEEcCCcccCCCHHHHHHHHHhc
Q 023551 224 TEFIILASDGLWKVMSNQDAADAIKNI 250 (281)
Q Consensus 224 ~~~llL~SDGl~d~l~~~ei~~i~~~~ 250 (281)
.+..|..|||+.+.++++|+..++.++
T Consensus 106 ~~~~V~vt~gLl~~l~~~El~AVlAHE 132 (288)
T PRK03982 106 KHAVVAVTEGILNLLNEDELEGVIAHE 132 (288)
T ss_pred CCeEEEeehHHHhhCCHHHHHHHHHHH
Confidence 355688899999999999999888664
No 29
>PRK03072 heat shock protein HtpX; Provisional
Probab=23.38 E-value=84 Score=27.17 Aligned_cols=27 Identities=4% Similarity=0.305 Sum_probs=22.8
Q ss_pred CeEEEEEcCCcccCCCHHHHHHHHHhc
Q 023551 224 TEFIILASDGLWKVMSNQDAADAIKNI 250 (281)
Q Consensus 224 ~~~llL~SDGl~d~l~~~ei~~i~~~~ 250 (281)
...+|..|||+.+.++++|+..++.++
T Consensus 108 ~~~~v~vt~gLl~~l~~~El~aVlAHE 134 (288)
T PRK03072 108 RNAAVCCTEGILQILNERELRGVLGHE 134 (288)
T ss_pred CCcEEEecHHHHHhCCHHHHHHHHHHH
Confidence 445788899999999999999888664
No 30
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=22.64 E-value=1.3e+02 Score=19.29 Aligned_cols=26 Identities=19% Similarity=0.253 Sum_probs=21.3
Q ss_pred CCCHHHHHHHHHhc-CCHHHHHHHHHH
Q 023551 237 VMSNQDAADAIKNI-KDARSAARHLTE 262 (281)
Q Consensus 237 ~l~~~ei~~i~~~~-~~~~~~a~~l~~ 262 (281)
..++++|...+... -||.+++++|+.
T Consensus 18 ~hse~eIya~L~ecnMDpnea~qrLL~ 44 (60)
T PF06972_consen 18 CHSEEEIYAMLKECNMDPNEAVQRLLS 44 (60)
T ss_pred CCCHHHHHHHHHHhCCCHHHHHHHHHh
Confidence 36788999888775 699999999985
No 31
>PF04077 DsrH: DsrH like protein; InterPro: IPR007215 The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulphur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulphide moiety, delivered by the cysteine desulphurase IscS to TusA, then to TusBCD. The activated sulphur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulphur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulphur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulphur flux, such as oxidation from sulphide to molecular sulphur to sulphate [].; GO: 0002143 tRNA wobble position uridine thiolation, 0005737 cytoplasm; PDB: 2HYB_O 2HY5_C 1X9A_A 1RHX_A 2D1P_C.
Probab=20.95 E-value=24 Score=24.51 Aligned_cols=25 Identities=16% Similarity=0.379 Sum_probs=18.1
Q ss_pred CeEEEEEcCCcccCCCHHHHHHHHH
Q 023551 224 TEFIILASDGLWKVMSNQDAADAIK 248 (281)
Q Consensus 224 ~~~llL~SDGl~d~l~~~ei~~i~~ 248 (281)
+|-|||.-||++-.+........+.
T Consensus 19 ~D~ilLiqDgV~~a~~~~~~~~~l~ 43 (88)
T PF04077_consen 19 GDAILLIQDGVYAALKGSPYFKLLQ 43 (88)
T ss_dssp T-EEEE-GGGGGGGBTTSTTHHHHH
T ss_pred CCEEEeeHHHHHHHhcCCHHHHHHh
Confidence 8899999999999888766555544
No 32
>PRK04897 heat shock protein HtpX; Provisional
Probab=20.14 E-value=1.1e+02 Score=26.56 Aligned_cols=37 Identities=14% Similarity=0.267 Sum_probs=27.4
Q ss_pred CceEEEEcCCCCeEEEEEcCCcccCCCHHHHHHHHHhc
Q 023551 213 PHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNI 250 (281)
Q Consensus 213 p~i~~~~l~~~~~~llL~SDGl~d~l~~~ei~~i~~~~ 250 (281)
|.-......+ ....|+.|+|+.+.++++|+..++.++
T Consensus 108 ~NAfa~G~~~-~~~~v~vt~gLl~~l~~~El~aVlAHE 144 (298)
T PRK04897 108 PNAFATGSSP-KNAAVAVTTGLLAIMNREELEGVIGHE 144 (298)
T ss_pred CceEEeccCC-CCcEEEeehHHHhhCCHHHHHHHHHHH
Confidence 4444444444 456799999999999999999888764
Done!