Citrus Sinensis ID: 023553

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Protein Sequence
MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccEEccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccEEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHcccccEEEEcccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHcccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccEEEEEccHHHccEcccEHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEccEccHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcHHHccccccEEEEcccEEEEccccEEcc
Coil and Loop (DISEMBL)
msnsnstdsspaVQRLVGRVALItggatgigESTVRLFHKHGAKVCIADVqdnlgqqvcqslggepdtffchcdvtkeedvcSAVDLTVEKFGTLDIMvnnagisgapcpdireadLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVagaigglgphaytgskhavLGLNKNVAAELGKygirvncvSPYAVATGLalahlpeeertedAMVGFRNFVARnanmqgteltANDVANAVLFLASDEaryisgtnlmvdggftsVNHSLRVFR
Flexible Loop (DISEMBL)
msnsnstdsspaVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR
Low Complexity Region (SEG)
MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR
Disordered region (IsUnstruct)
*************QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNH******
Disordered Region (DISOPRED)
******************RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP*************NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVF*
Disordered Region (DISEMBL)
************VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR
Disordered Region (DISPRO)
***********AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	280	2.2.26 [Sep-21-2011]
Q9C826	285	Xanthoxin dehydrogenase O	yes	no	0.953	0.936	0.722	1e-109
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	0.95	0.996	0.650	1e-101
Q7FAE1	274	Momilactone A synthase OS	no	no	0.960	0.981	0.501	2e-64
Q9SCU0	303	Short-chain dehydrogenase	no	no	0.946	0.874	0.496	2e-63
O80713	257	Short-chain dehydrogenase	no	no	0.892	0.972	0.480	6e-60
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.9	0.845	0.475	1e-58
P50160	336	Sex determination protein	N/A	no	0.939	0.782	0.449	2e-58
F4J300	259	Short-chain dehydrogenase	no	no	0.896	0.969	0.471	5e-58
Q94K41	257	Short-chain dehydrogenase	no	no	0.885	0.964	0.467	2e-57
O80714	258	Short-chain dehydrogenase	no	no	0.896	0.972	0.454	6e-54

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score =  395 bits (1016), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/270 (72%), Positives = 229/270 (84%), Gaps = 3/270 (1%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL--GGEPDT-FF 70
           QRL+G+VALITGGATGIGES VRLFHKHGAKVCI D+QD+LG +VC+SL  G   +T FF
Sbjct: 16  QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFF 75

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
            H DV  E+D+ +AVD  V+ FGTLDI++NNAG+ GAPCPDIR   LSEFE  FD+NVKG
Sbjct: 76  IHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKG 135

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            F  MKHAAR+MIP+ KG+I+S+CSV G +GG+GPH+Y GSKHAVLGL ++VAAELG++G
Sbjct: 136 AFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHG 195

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVNCVSPYAVAT LALAHLPEEERTEDA VGFRNF A NAN++G ELT +DVANAVLFL
Sbjct: 196 IRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFL 255

Query: 251 ASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           ASD++RYISG NLM+DGGFT  NHS +VFR
Sbjct: 256 ASDDSRYISGDNLMIDGGFTCTNHSFKVFR 285

Involved in the biosynthesis of abscisic acid.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 8EC: 8

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  368 bits (945), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 173/266 (65%), Positives = 215/266 (80%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VAL+TGGA+GIGES  RLF +HGAK+CI DVQD LGQQV Q LGG+P   + HCD
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT E+DV  AVD T EK+GT+DIMVNNAGI+G    DIR+AD +EF+KVFDINV GVF G
Sbjct: 62  VTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLG 121

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           MKHAARIMIP+ KG+I+S+ SV+  I G GPH YTG+KHAV+GL K+VAAELG++GIRVN
Sbjct: 122 MKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRVN 181

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           CVSPYAV T L++ +LPE E  EDA+ GF  FV  NAN++G +L  NDVA AVL+LA++E
Sbjct: 182 CVSPYAVPTRLSMPYLPESEMQEDALRGFLTFVRSNANLKGVDLMPNDVAEAVLYLATEE 241

Query: 255 ARYISGTNLMVDGGFTSVNHSLRVFR 280
           ++Y+SG NL++DGGF+  NH+L+VF 
Sbjct: 242 SKYVSGLNLVIDGGFSIANHTLQVFE 267

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.

Zingiber zerumbet (taxid: 311405)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 6

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  245 bits (626), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 140/279 (50%), Positives = 188/279 (67%), Gaps = 10/279 (3%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG 63
           + S+  S   ++LVG+VA+ITGGA+GIG  T RLF KHGA+V +AD+QD LG  +   LG
Sbjct: 3   AGSSHVSADARKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELG 62

Query: 64  GEPD-TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK 122
             PD + + HCDVT E DV +AVD  V +FG LD+M NNAG+SG PC  + E    +FE+
Sbjct: 63  --PDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFER 120

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           V  +N+ G F G KHAAR+M P  +G+IIS  S++ ++ G   HAYT SKHA++G  +N 
Sbjct: 121 VLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENA 180

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT-ELTAN 241
           A ELG++GIRVNCVSP  VAT LA A +  ++   +A+      +A +AN++G   L A+
Sbjct: 181 AGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAI------MANSANLKGAGALKAD 234

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           D+A A LFLASD+ RY+SG NL VDGG + VN S   FR
Sbjct: 235 DIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFFR 273

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 5

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  243 bits (619), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/274 (49%), Positives = 181/274 (66%), Gaps = 9/274 (3%)

Query: 7   TDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE- 65
           T+++   +RL G+VA+ITGGA GIG++TV LF +HGA V IADV +  G  + +SL    
Sbjct: 23  TNTTLYPKRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHK 82

Query: 66  --PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG--APCPDIREADLSEFE 121
             P   F  CDV+ E DV + V++TV ++G LDI+ NNAG+ G       I + D  EF+
Sbjct: 83  TSPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFD 142

Query: 122 KVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
            V  +NV+GV  GMKH AR MI +  KG IIS  SVAG +GG+GPHAYT SKHA++GL K
Sbjct: 143 HVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTK 202

Query: 181 NVAAELGKYGIRVNCVSPYAVATGL---ALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
           N A ELGKYGIRVNC+SP+ VAT +   A       +  +D +     FV   AN++G  
Sbjct: 203 NAACELGKYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGET 262

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
           L AND+A A L+LASDE++Y++G NL+VDGG T+
Sbjct: 263 LRANDIAEAALYLASDESKYVNGHNLVVDGGVTT 296

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score =  231 bits (588), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 125/260 (48%), Positives = 170/260 (65%), Gaps = 10/260 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G++A+ITGGA+GIG   VRLF  HGAKV I D Q+ LGQ V  S+G +  +F+  CD
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFY-RCD 63

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT E++V +AV  TVEK+G LD++ +NAG+   P   + + +L +F++   +NV+G    
Sbjct: 64  VTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFL-DLNLEQFDRTMAVNVRGAAAF 122

Query: 135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +KHAAR M+ + T+G+I+   SVA  IGG GPHAYT SKHA+LGL K+    LGKYGIRV
Sbjct: 123 IKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRV 182

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+PYAVAT +         R E+ +     + A    ++G  L A  VA A LFLASD
Sbjct: 183 NGVAPYAVATAI-------NSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASD 235

Query: 254 EARYISGTNLMVDGGFTSVN 273
           ++ Y+SG NL VDGG++ V 
Sbjct: 236 DSAYVSGQNLAVDGGYSVVK 255

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  226 bits (577), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 124/261 (47%), Positives = 171/261 (65%), Gaps = 9/261 (3%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           Q L G++A+ITGGA+GIG   VRLF  HGAKV I D+Q+ LGQ +  S+G +  +F+  C
Sbjct: 42  QVLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFY-RC 100

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           +VT E DV +AV  TVEK G LD++ +NAG+  A    + + DL  F++   +NV+G   
Sbjct: 101 NVTDETDVENAVKFTVEKHGKLDVLFSNAGVLEA-FGSVLDLDLEAFDRTMAVNVRGAAA 159

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            +KHAAR M+   T+G+I+   S+A  IGG GPH+YT SKHA+LGL ++  A LG+YGIR
Sbjct: 160 FIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIR 219

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN V+PY VATG+  A+       E+A+     +     N++G  L A  +A A LFLAS
Sbjct: 220 VNGVAPYGVATGMTSAY------NEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLAS 273

Query: 253 DEARYISGTNLMVDGGFTSVN 273
           D++ YISG NL+VDGGF+ V 
Sbjct: 274 DDSVYISGQNLVVDGGFSVVK 294

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score =  226 bits (575), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/296 (44%), Positives = 175/296 (59%), Gaps = 33/296 (11%)

Query: 3   NSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL 62
           N  +   +P  +RL G+VA++TGGA GIGE+ VRLF KHGA+V IAD+ D  G+ +  +L
Sbjct: 40  NGATAVPTPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASAL 99

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-TLDIMVNNAGISGAPCPDIREA---DLS 118
           G  P   F  CDV+ E+DV  AVD  + + G  LD+  NNAG+ G      R     D +
Sbjct: 100 G--PQVSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAA 157

Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           EF++V  +N  G   GMKHAAR M P+  G+I+S+ SVA  +GGLGPHAYT SKHA++GL
Sbjct: 158 EFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGL 217

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLAL-----------------------AHLPEEER 215
            KN A EL  +G+RVNCVSP+ VAT + +                         +P ++ 
Sbjct: 218 TKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQE 277

Query: 216 TEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
            E      R      A ++G  L   D+A AVLFLASDEARYISG NL+VDGG T+
Sbjct: 278 VEKMEEVVRGL----ATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTT 329

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score =  224 bits (571), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 123/261 (47%), Positives = 167/261 (63%), Gaps = 10/261 (3%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           QRL G++ +ITGGA+GIG    RLF  HGAKV I D+Q+ LGQ V  S+G +  +F+  C
Sbjct: 4   QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFY-RC 62

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D+T E +V +AV  TVEK G LD++ +NAG+   P   I + DL  F++   +NV+G   
Sbjct: 63  DITDETEVENAVKFTVEKHGKLDVLFSNAGVM-EPHGSILDLDLEAFDRTMAVNVRGAAA 121

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            +KHAAR M+   T+G+I+   SV   IGG GPH+YT SKHA+LGL ++    LGKYGIR
Sbjct: 122 FIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIR 181

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN V+PY VATGL           E+ +    ++ +  A ++G  L A  VA+A LFLAS
Sbjct: 182 VNGVAPYGVATGLT-------SYNEETVKMVEDYCSATAILKGVVLKARHVADAALFLAS 234

Query: 253 DEARYISGTNLMVDGGFTSVN 273
           D++ YISG NL VDGG++ V 
Sbjct: 235 DDSVYISGQNLGVDGGYSVVK 255

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  223 bits (567), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/265 (46%), Positives = 169/265 (63%), Gaps = 17/265 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +RL G++ +ITGGA+GIG  +VRLF +HGA+V I DVQD LGQ V  S+G +  +++ HC
Sbjct: 4   KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYY-HC 62

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT E +V +AV  TVEK+G LD++ +NAG+   P   I + +L+E ++   IN++G   
Sbjct: 63  DVTNETEVENAVKFTVEKYGKLDVLFSNAGVI-EPFVSILDLNLNELDRTIAINLRGTAA 121

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            +KHAAR M+ +  +G+I+   SVA  I G  PH YT SKH +LGL K+ +  LGKYGIR
Sbjct: 122 FIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIR 181

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN----ANMQGTELTANDVANAVL 248
           VN V+P+ VAT L       E           N V +N    AN++G  L A  VA A L
Sbjct: 182 VNGVAPFGVATPLVCNGFKMEP----------NVVEQNTSASANLKGIVLKARHVAEAAL 231

Query: 249 FLASDEARYISGTNLMVDGGFTSVN 273
           FLASDE+ Y+SG NL VDGG++ V 
Sbjct: 232 FLASDESAYVSGQNLAVDGGYSVVK 256

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score =  211 bits (536), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 119/262 (45%), Positives = 160/262 (61%), Gaps = 11/262 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G++ +ITGGA+GIG    RLF  HGAKV I DVQ+ LGQ V   +G +  +F+  CD
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFY-RCD 63

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT E +V  AV  TVEK G LD++ +NAG+   P     + DL  F+++  +NV+G    
Sbjct: 64  VTNETEVEDAVKFTVEKHGKLDVLFSNAGVL-EPLESFLDFDLERFDRIMAVNVRGAAAF 122

Query: 135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +KHAAR M+ + T+G+I+   SV+  IGG G H YT SKH ++GL ++   +LGKYGIRV
Sbjct: 123 IKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRV 181

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+PYAVAT       P     E       ++      ++G  L A+ VA   LFLASD
Sbjct: 182 NGVAPYAVAT-------PMTSHDEVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASD 234

Query: 254 EARYISGTNLMVDGGFTSVNHS 275
           ++ YISG NL VDGG+T V  S
Sbjct: 235 DSAYISGQNLAVDGGYTVVKPS 256

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
296875330	280	short chain alcohol dehydrogenase [Citru	1.0	1.0	0.989	1e-160
224053312	280	predicted protein [Populus trichocarpa]	1.0	1.0	0.767	1e-125
356541534	313	PREDICTED: xanthoxin dehydrogenase-like	1.0	0.894	0.764	1e-124
356539484	280	PREDICTED: xanthoxin dehydrogenase-like	1.0	1.0	0.746	1e-121
255637887	280	unknown [Glycine max]	1.0	1.0	0.742	1e-121
255572807	280	short chain alcohol dehydrogenase, putat	1.0	1.0	0.735	1e-120
255544059	280	short chain alcohol dehydrogenase, putat	1.0	1.0	0.735	1e-120
50346893	275	short-chain dehydrogenase/reductase [Sol	0.975	0.992	0.743	1e-118
225449868	280	PREDICTED: xanthoxin dehydrogenase-like	0.989	0.989	0.733	1e-117
297852988	285	hypothetical protein ARALYDRAFT_474354 [	1.0	0.982	0.705	1e-113

>gi|296875330|gb|ADH82118.1| short chain alcohol dehydrogenase [Citrus sinensis]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 277/280 (98%), Positives = 277/280 (98%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ
Sbjct: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF
Sbjct: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           EKVFDIN KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA LGLNK
Sbjct: 121 EKVFDINXKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAXLGLNK 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA
Sbjct: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           NDVANAVLFLASDEARYI GTNLMVDGGFTSVNHSLRVFR
Sbjct: 241 NDVANAVLFLASDEARYIXGTNLMVDGGFTSVNHSLRVFR 280

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053312|ref|XP_002297758.1| predicted protein [Populus trichocarpa] gi|222845016|gb|EEE82563.1| predicted protein [Populus trichocarpa]

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/280 (76%), Positives = 248/280 (88%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+ ++STDSS +  RL+G+VAL+TGGATGIGES  RLF +HGAKVCIAD+QDNLGQ VC+
Sbjct: 1   MATASSTDSSLSPLRLLGKVALVTGGATGIGESIARLFCRHGAKVCIADLQDNLGQNVCE 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLGGEP T + HCDVT E+DV  AVD TV+KFGTLDIMVNNAG+ G PCPDIR+  LS+F
Sbjct: 61  SLGGEPKTCYIHCDVTIEDDVRQAVDFTVDKFGTLDIMVNNAGLGGPPCPDIRKVALSDF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           EKVFD+NVKGVF GMKHAARIMIP  KG+I+S+CSVA AIGG+GPHAYTGSKHAVLGL +
Sbjct: 121 EKVFDVNVKGVFLGMKHAARIMIPLNKGSIVSLCSVASAIGGIGPHAYTGSKHAVLGLTR 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           +VAAELGK+GIRVNCVSPY VAT LA+AHLPE+ERTEDA++GFR+F+ RNAN+QG ELT 
Sbjct: 181 SVAAELGKHGIRVNCVSPYGVATSLAVAHLPEDERTEDALIGFRSFIGRNANLQGVELTV 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +DVANAVLFLASDEARYISG NLM+DGGFT  NHSLRVFR
Sbjct: 241 DDVANAVLFLASDEARYISGDNLMLDGGFTCTNHSLRVFR 280

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541534|ref|XP_003539230.1| PREDICTED: xanthoxin dehydrogenase-like [Glycine max]

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/280 (76%), Positives = 243/280 (86%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           MS + +  +S   QRL+G+VAL+TGGA+GIGES VRLFH HGAK+CIADVQDNLG+QVCQ
Sbjct: 34  MSTTGTVLASTPTQRLLGKVALVTGGASGIGESIVRLFHIHGAKICIADVQDNLGKQVCQ 93

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLG E +  F HCDVT E+DV  AVD TV KFGTL I+VNNAGISG+PC DIR ADLSEF
Sbjct: 94  SLGDEANVVFVHCDVTVEDDVSHAVDFTVGKFGTLHIIVNNAGISGSPCSDIRNADLSEF 153

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           +KVF +N KGVFHGMKHAARIMIP+ KG+IIS+CSVA AIGGLGPHAYTGSK+AVLGL K
Sbjct: 154 DKVFSVNTKGVFHGMKHAARIMIPKKKGSIISLCSVASAIGGLGPHAYTGSKYAVLGLTK 213

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           NVAAELGK+ IRVNCVSPY VATGLALAHLPE+ERT+DA+V FR+F  R AN+QG ELT 
Sbjct: 214 NVAAELGKHAIRVNCVSPYGVATGLALAHLPEDERTDDALVSFRDFTGRMANLQGVELTT 273

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +DVANAVLFLASD+A+YISG NLMVDGGFTS NHSL+VFR
Sbjct: 274 HDVANAVLFLASDDAKYISGENLMVDGGFTSANHSLQVFR 313

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539484|ref|XP_003538228.1| PREDICTED: xanthoxin dehydrogenase-like [Glycine max]

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/280 (74%), Positives = 244/280 (87%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           MS + +  +S    RL+G+VAL+TGGA+GIGES VRLFH HGAK+CIADVQDNLG+Q+C+
Sbjct: 1   MSTTGNVLASTPTPRLLGKVALVTGGASGIGESIVRLFHIHGAKICIADVQDNLGKQICE 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLG E +  F HCDVT E+DV  AV+ TV KFGTLDI+VNNAGISG+PCPDIR+ADLSEF
Sbjct: 61  SLGDEANVVFVHCDVTVEDDVSHAVNFTVGKFGTLDIIVNNAGISGSPCPDIRDADLSEF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           +KVF IN KGVFHGMKH+AR+MIP  KG+IIS+ SVA A+GG+G HAYTGSKHAVLGL K
Sbjct: 121 DKVFSINAKGVFHGMKHSARVMIPNKKGSIISLSSVASALGGIGIHAYTGSKHAVLGLTK 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           +VAAELGK+ IRVNCVSPYAVATGLALAHLPE++RTEDA+ GFR+F  R AN+QG ELT 
Sbjct: 181 SVAAELGKHSIRVNCVSPYAVATGLALAHLPEDQRTEDALAGFRDFTGRMANLQGVELTT 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +D+ANAVLFLASDEARYISG NLMVDGGFTSVNHSL+VF+
Sbjct: 241 HDIANAVLFLASDEARYISGENLMVDGGFTSVNHSLQVFK 280

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637887|gb|ACU19262.1| unknown [Glycine max]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/280 (74%), Positives = 243/280 (86%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           MS + +  +S    RL+G+VAL+TGGA+GIGES VRLFH HGAK+CIADVQDNLG+Q+C+
Sbjct: 1   MSTTGNVLASTPTPRLLGKVALVTGGASGIGESIVRLFHIHGAKICIADVQDNLGKQICE 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLG E +  F HCDVT E+DV  AV+ TV KFGTLDI+VNNAGISG+PCPDIR+ADLSEF
Sbjct: 61  SLGDEANVVFVHCDVTVEDDVSHAVNFTVGKFGTLDIIVNNAGISGSPCPDIRDADLSEF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           +KVF IN KGVFHGMKH+AR+MIP  KG+IIS+ SVA A+GG+G HAYTGSKHAVLGL K
Sbjct: 121 DKVFSINAKGVFHGMKHSARVMIPNKKGSIISLSSVASALGGIGIHAYTGSKHAVLGLTK 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           +VAAELGK+ IRVNCVSPYAVATGLALAHLPE++RTEDA+ GFR+F  R AN+QG ELT 
Sbjct: 181 SVAAELGKHSIRVNCVSPYAVATGLALAHLPEDQRTEDALAGFRDFTGRMANLQGVELTT 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +D+ANAVLFLASDEARYISG N MVDGGFTSVNHSL+VF+
Sbjct: 241 HDIANAVLFLASDEARYISGENFMVDGGFTSVNHSLQVFK 280

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572807|ref|XP_002527336.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223533336|gb|EEF35088.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 206/280 (73%), Positives = 244/280 (87%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+ ++S  S+ + QRL+G+VAL+TGG+TGIGES VRLFHKHGAKVC+ D++DNLGQ VC+
Sbjct: 1   MATTSSVASTLSCQRLLGKVALVTGGSTGIGESIVRLFHKHGAKVCLVDLEDNLGQNVCE 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLGGEP+  + HCDVT E++V  AV+ TV+KFGTLDIMVNNAG+SG PCPDIR  +LS+F
Sbjct: 61  SLGGEPNICYFHCDVTVEDEVQRAVEFTVDKFGTLDIMVNNAGLSGPPCPDIRYTELSDF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           +KVFD+NVKG F GMKHAARIMIP  KG+IIS+CSVA  IGGLGPH YTGSKHAVLGL +
Sbjct: 121 QKVFDVNVKGTFIGMKHAARIMIPLNKGSIISLCSVASTIGGLGPHGYTGSKHAVLGLTR 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           NVAAELGK+GIRVNCVSPYAV T LALAHL E+ERTEDAM GF+ F  +NAN+QG ELTA
Sbjct: 181 NVAAELGKHGIRVNCVSPYAVPTNLALAHLHEDERTEDAMAGFKAFARKNANLQGVELTA 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +DVAN+VLFLAS+E+RYISG NLM+DGGFT+ NHSLRVFR
Sbjct: 241 DDVANSVLFLASEESRYISGENLMIDGGFTNSNHSLRVFR 280

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544059|ref|XP_002513092.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223548103|gb|EEF49595.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 206/280 (73%), Positives = 242/280 (86%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+ ++S  S+   QRL+G+VAL+TGG+TGIGES VRLFHKHGAKVC+ D+ DNLGQ VC+
Sbjct: 1   MATTSSVGSTLYCQRLLGKVALVTGGSTGIGESIVRLFHKHGAKVCLVDLDDNLGQNVCK 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLGGEP+  + HCDVT E++V  AVD TV+KFGTLDIMVNNAG+SG PC DIR  +LS+F
Sbjct: 61  SLGGEPNICYFHCDVTVEDEVQRAVDFTVDKFGTLDIMVNNAGLSGPPCSDIRCTELSDF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           +KVFD+N KG F GMKHAAR+MIP  +G+IIS+CSVA  IGGLGPHAYTGSKHAVLGL +
Sbjct: 121 QKVFDVNTKGTFIGMKHAARVMIPLNRGSIISLCSVASTIGGLGPHAYTGSKHAVLGLTR 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           NVAAELGK+GIRVNCVSPYAV T LALAHLPE+ERTEDAM GF+ F  +NANMQG ELTA
Sbjct: 181 NVAAELGKHGIRVNCVSPYAVPTNLALAHLPEDERTEDAMAGFKAFARKNANMQGIELTA 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +DVAN+VLFLAS+E+RYISG NLM+DGGFT+ NHSLRVFR
Sbjct: 241 DDVANSVLFLASEESRYISGANLMIDGGFTTSNHSLRVFR 280

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|50346893|gb|AAT75153.1| short-chain dehydrogenase/reductase [Solanum tuberosum]

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/273 (74%), Positives = 237/273 (86%)

Query: 8   DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD 67
           D+S  +QRL+G+VAL+TGGATGIGES VRLFHKHGAKVCIAD++D +GQ VC++LG + +
Sbjct: 3   DTSLPIQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIADIRDEVGQHVCETLGNDQN 62

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
             F HCDVT E DV +AVD TV+KFGTLDIMVNNAG+SG P  DIR+ +LS FE V D+N
Sbjct: 63  VCFIHCDVTVEADVSNAVDFTVQKFGTLDIMVNNAGLSGPPIRDIRDYELSVFENVLDVN 122

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           +KG F GMKHAARIMIP  KG I+S+CSVA AIGG+GPH Y  SK+AVLGL +NVAAE+G
Sbjct: 123 LKGAFLGMKHAARIMIPLKKGAIVSLCSVASAIGGIGPHGYAASKYAVLGLTQNVAAEMG 182

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           K+G+RVNCVSPYAVATGLALAHLPE+E+T+DAM GFR+FVARNAN+QG EL ANDVANAV
Sbjct: 183 KHGVRVNCVSPYAVATGLALAHLPEDEKTDDAMEGFRDFVARNANLQGVELMANDVANAV 242

Query: 248 LFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           LFLASDE+RYISG NLMVDGGF+ VNHSLRVFR
Sbjct: 243 LFLASDESRYISGHNLMVDGGFSCVNHSLRVFR 275

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449868|ref|XP_002265724.1| PREDICTED: xanthoxin dehydrogenase-like [Vitis vinifera]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/278 (73%), Positives = 238/278 (85%), Gaps = 1/278 (0%)

Query: 4   SNSTDSSP-AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL 62
           + S D+SP   QRL+G+VAL+TGGATGIGES VRLF K GAKVCI DVQD+LGQ++C +L
Sbjct: 3   ATSIDNSPLPSQRLLGKVALVTGGATGIGESIVRLFLKQGAKVCIVDVQDDLGQKLCDTL 62

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK 122
           GG+P+  F HCDVT E+DVC AVD TV KFGTLDIMVNNAG++G PC DIR  ++S FEK
Sbjct: 63  GGDPNVSFFHCDVTIEDDVCHAVDFTVTKFGTLDIMVNNAGMAGPPCSDIRNVEVSMFEK 122

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           VFD+NVKGVF GMKHAARIMIP  KGTIIS+CSV+ AI G+GPHAYTGSK AV GL ++V
Sbjct: 123 VFDVNVKGVFLGMKHAARIMIPLKKGTIISLCSVSSAIAGVGPHAYTGSKCAVAGLTQSV 182

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
           AAE+G +GIRVNC+SPYA+ATGLALAHLPE+ERTEDAM GFR FV +NAN+QG ELT +D
Sbjct: 183 AAEMGGHGIRVNCISPYAIATGLALAHLPEDERTEDAMAGFRAFVGKNANLQGVELTVDD 242

Query: 243 VANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           VA+A +FLASDEARYISG NLM+DGGF+  NHSLRVFR
Sbjct: 243 VAHAAVFLASDEARYISGLNLMLDGGFSCTNHSLRVFR 280

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297852988|ref|XP_002894375.1| hypothetical protein ARALYDRAFT_474354 [Arabidopsis lyrata subsp. lyrata] gi|297340217|gb|EFH70634.1| hypothetical protein ARALYDRAFT_474354 [Arabidopsis lyrata subsp. lyrata]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/285 (70%), Positives = 235/285 (82%), Gaps = 5/285 (1%)

Query: 1   MSNSNSTDSS--PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV 58
           MS +  + SS  P   RL+G+VALITGGATGIGES VRLFHKHGA VCI D+QD+LG +V
Sbjct: 1   MSTNTPSSSSALPPCDRLLGKVALITGGATGIGESIVRLFHKHGANVCIVDLQDDLGNEV 60

Query: 59  CQSL-GGEPDTFFC--HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA 115
           C+SL  GE     C  H DV  E+D+ +AVD  V+KFGTLDI++NNAG+ GAPCPDIR  
Sbjct: 61  CKSLLSGETKETACFIHGDVRVEDDISNAVDFAVKKFGTLDILINNAGLCGAPCPDIRNN 120

Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
            LSEFEK+FD+NVKG F  MKHAAR+MIP+ KG+I+S+CSV G +GG+GPHAY GSKHAV
Sbjct: 121 SLSEFEKIFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVMGGIGPHAYVGSKHAV 180

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           LGL ++VAAELG++GIRVNCVSPYAVAT LALAHLPEEERTEDA VGFRNF A NAN++G
Sbjct: 181 LGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKG 240

Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
            ELT +DVANAVLFLASDE+RYISG NLM+DGGFT  NHS +VFR
Sbjct: 241 VELTVDDVANAVLFLASDESRYISGDNLMIDGGFTCTNHSFKVFR 285

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
TAIR|locus:2018149	285	ABA2 "ABA DEFICIENT 2" [Arabid	0.992	0.975	0.705	1.4e-105
TAIR|locus:2098287	303	SDR2 "short-chain dehydrogenas	0.957	0.884	0.490	4.8e-62
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.946	0.772	0.459	1.1e-57
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.889	0.968	0.482	3.6e-57
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.903	0.826	0.463	5.9e-57
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.896	0.842	0.476	2e-56
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.892	0.965	0.484	1.4e-55
TAIR|locus:2041394	257	SDR5 "short-chain dehydrogenas	0.896	0.976	0.473	3.7e-55
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.896	0.972	0.465	3.8e-53
TAIR|locus:2088419	300	AT3G26760 [Arabidopsis thalian	0.914	0.853	0.424	1.7e-52

TAIR|locus:2018149 ABA2 "ABA DEFICIENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
 Identities = 199/282 (70%), Positives = 236/282 (83%)

Query:     2 SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS 61
             + S+S  S P+ QRL+G+VALITGGATGIGES VRLFHKHGAKVCI D+QD+LG +VC+S
Sbjct:     5 TESSSYSSLPS-QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKS 63

Query:    62 L--GGEPDT-FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS 118
             L  G   +T FF H DV  E+D+ +AVD  V+ FGTLDI++NNAG+ GAPCPDIR   LS
Sbjct:    64 LLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLS 123

Query:   119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
             EFE  FD+NVKG F  MKHAAR+MIP+ KG+I+S+CSV G +GG+GPH+Y GSKHAVLGL
Sbjct:   124 EFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGL 183

Query:   179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
              ++VAAELG++GIRVNCVSPYAVAT LALAHLPEEERTEDA VGFRNF A NAN++G EL
Sbjct:   184 TRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVEL 243

Query:   239 TANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
             T +DVANAVLFLASD++RYISG NLM+DGGFT  NHS +VFR
Sbjct:   244 TVDDVANAVLFLASDDSRYISGDNLMIDGGFTCTNHSFKVFR 285

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010301 "xanthoxin dehydrogenase activity" evidence=IDA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=TAS

GO:0009408 "response to heat" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010115 "regulation of abscisic acid biosynthetic process" evidence=IMP

GO:0009750 "response to fructose stimulus" evidence=IMP

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

TAIR|locus:2098287 SDR2 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 136/277 (49%), Positives = 182/277 (65%)

Query:     7 TDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE- 65
             T+++   +RL G+VA+ITGGA GIG++TV LF +HGA V IADV +  G  + +SL    
Sbjct:    23 TNTTLYPKRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHK 82

Query:    66 --PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG--APCPDIREADLSEFE 121
               P   F  CDV+ E DV + V++TV ++G LDI+ NNAG+ G       I + D  EF+
Sbjct:    83 TSPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFD 142

Query:   122 KVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
              V  +NV+GV  GMKH AR MI +  KG IIS  SVAG +GG+GPHAYT SKHA++GL K
Sbjct:   143 HVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTK 202

Query:   181 NVAAELGKYGIRVNCVSPYAVATGL---ALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
             N A ELGKYGIRVNC+SP+ VAT +   A       +  +D +     FV   AN++G  
Sbjct:   203 NAACELGKYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGET 262

Query:   238 LTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNH 274
             L AND+A A L+LASDE++Y++G NL+VDGG T+  +
Sbjct:   263 LRANDIAEAALYLASDESKYVNGHNLVVDGGVTTARN 299

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
 Identities = 124/270 (45%), Positives = 175/270 (64%)

Query:     4 SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG 63
             S+S+ S    ++L G+VALITGGA+GIG++T   F  HGAKV IAD+Q  +G++  Q LG
Sbjct:    66 SSSSSSHSTSRKLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELG 125

Query:    64 GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV 123
               P   +  CDVTKE D+ +AVD  V     LDIM NNAGI     P I + DL+ F+KV
Sbjct:   126 --PSCAYFPCDVTKESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVDLDLNVFDKV 183

Query:   124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
              + NV+GV  G+KHAAR+MIP+  G+II   SV G +GGL  H Y+ SK AV+G+ ++ A
Sbjct:   184 INTNVRGVMAGIKHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTA 243

Query:   184 AELGKYGIRVNCVSPYAVATGLALAHLPE-EERTEDAMVGFRNFVARNANMQGTELTAND 242
             +EL K+ IRVNC+SP+A+ T   +  + +     +D+ +     V     + G      D
Sbjct:   244 SELCKHRIRVNCISPFAITTSFVMDEMRQIYPGVDDSRL--IQIVQSTGVLNGEVCEPTD 301

Query:   243 VANAVLFLASDEARYISGTNLMVDGGFTSV 272
             VANA ++LASD+++Y++G NL+VDGGFT+V
Sbjct:   302 VANAAVYLASDDSKYVNGHNLVVDGGFTTV 331

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
 Identities = 125/259 (48%), Positives = 169/259 (65%)

Query:    15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
             RL G++A+ITGGA+GIG   VRLF  HGAKV I D Q+ LGQ V  S+G +  +F+  CD
Sbjct:     5 RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFY-RCD 63

Query:    75 VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
             VT E++V +AV  TVEK+G LD++ +NAG+   P     + +L +F++   +NV+G    
Sbjct:    64 VTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQP-GSFLDLNLEQFDRTMAVNVRGAAAF 122

Query:   135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +KHAAR M+ + T+G+I+   SVA  IGG GPHAYT SKHA+LGL K+    LGKYGIRV
Sbjct:   123 IKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRV 182

Query:   194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
             N V+PYAVAT +         R E+ +     + A    ++G  L A  VA A LFLASD
Sbjct:   183 NGVAPYAVATAI-------NSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASD 235

Query:   254 EARYISGTNLMVDGGFTSV 272
             ++ Y+SG NL VDGG++ V
Sbjct:   236 DSAYVSGQNLAVDGGYSVV 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 121/261 (46%), Positives = 173/261 (66%)

Query:    14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             ++L G+VALITGGA+G+G++T   F +HGA+V IAD+    G +  + LG E +  F  C
Sbjct:    39 KKLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEAE--FVRC 96

Query:    74 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP-DIREADLSEFEKVFDINVKGVF 132
             DVT E D+  AV++TVE++G LD+M NNAGI G   P  I + D++EFE+V  INV GV 
Sbjct:    97 DVTVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVV 156

Query:   133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              G+KHAA+ MIP   G I+   SVAG  GGL PH+YT SK    G+ K+ A+EL ++G+R
Sbjct:   157 SGIKHAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCEHGVR 216

Query:   193 VNCVSPYAVATGLALAHLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
             +NC+SP  VAT L L++L +   + +E+ +   R  V     ++G E    DVA A L+L
Sbjct:   217 INCISPGTVATPLTLSYLQKVFPKVSEEKL---RETVKGMGELKGAECEEADVAKAALYL 273

Query:   251 ASDEARYISGTNLMVDGGFTS 271
             AS++ +Y++G NL+VDGG T+
Sbjct:   274 ASNDGKYVTGHNLVVDGGMTA 294

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 124/260 (47%), Positives = 171/260 (65%)

Query:    14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             Q L G++A+ITGGA+GIG   VRLF  HGAKV I D+Q+ LGQ +  S+G +  +F+  C
Sbjct:    42 QVLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFY-RC 100

Query:    74 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
             +VT E DV +AV  TVEK G LD++ +NAG+  A    + + DL  F++   +NV+G   
Sbjct:   101 NVTDETDVENAVKFTVEKHGKLDVLFSNAGVLEA-FGSVLDLDLEAFDRTMAVNVRGAAA 159

Query:   134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +KHAAR M+   T+G+I+   S+A  IGG GPH+YT SKHA+LGL ++  A LG+YGIR
Sbjct:   160 FIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIR 219

Query:   193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
             VN V+PY VATG+  A+       E+A+     +     N++G  L A  +A A LFLAS
Sbjct:   220 VNGVAPYGVATGMTSAY------NEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLAS 273

Query:   253 DEARYISGTNLMVDGGFTSV 272
             D++ YISG NL+VDGGF+ V
Sbjct:   274 DDSVYISGQNLVVDGGFSVV 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 126/260 (48%), Positives = 170/260 (65%)

Query:    14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             QRL G++ +ITGGA+GIG    RLF  HGAKV I D+Q+ LGQ V  S+G +  +F+  C
Sbjct:     4 QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFY-RC 62

Query:    74 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
             D+T E +V +AV  TVEK G LD++ +NAG+   P   I + DL  F++   +NV+G   
Sbjct:    63 DITDETEVENAVKFTVEKHGKLDVLFSNAGVM-EPHGSILDLDLEAFDRTMAVNVRGAAA 121

Query:   134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +KHAAR M+   T+G+I+   SV   IGG GPH+YT SKHA+LGL ++    LGKYGIR
Sbjct:   122 FIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIR 181

Query:   193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
             VN V+PY VATGL   +   EE  +  MV   ++ +  A ++G  L A  VA+A LFLAS
Sbjct:   182 VNGVAPYGVATGLTSYN---EETVK--MV--EDYCSATAILKGVVLKARHVADAALFLAS 234

Query:   253 DEARYISGTNLMVDGGFTSV 272
             D++ YISG NL VDGG++ V
Sbjct:   235 DDSVYISGQNLGVDGGYSVV 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041394 SDR5 "short-chain dehydrogenase reductase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 123/260 (47%), Positives = 170/260 (65%)

Query:    14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             +RL G++ +ITGGA+GIG  +VRLF +HGA+V I DVQD LGQ V  S+G +  +++ HC
Sbjct:     4 KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYY-HC 62

Query:    74 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
             DVT E +V +AV  TVEK+G LD++ +NAG+   P   I + +L+E ++   IN++G   
Sbjct:    63 DVTNETEVENAVKFTVEKYGKLDVLFSNAGVI-EPFVSILDLNLNELDRTIAINLRGTAA 121

Query:   134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +KHAAR M+ +  +G+I+   SVA  I G  PH YT SKH +LGL K+ +  LGKYGIR
Sbjct:   122 FIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIR 181

Query:   193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
             VN V+P+ VAT L       E    +     +N  A +AN++G  L A  VA A LFLAS
Sbjct:   182 VNGVAPFGVATPLVCNGFKMEPNVVE-----QNTSA-SANLKGIVLKARHVAEAALFLAS 235

Query:   253 DEARYISGTNLMVDGGFTSV 272
             DE+ Y+SG NL VDGG++ V
Sbjct:   236 DESAYVSGQNLAVDGGYSVV 255

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 122/262 (46%), Positives = 167/262 (63%)

Query:    15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
             RL G++ +ITGGA+GIG    RLF  HGAKV I DVQ+ LGQ V   +G +  +F+  CD
Sbjct:     5 RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFY-RCD 63

Query:    75 VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
             VT E +V  AV  TVEK G LD++ +NAG+   P     + DL  F+++  +NV+G    
Sbjct:    64 VTNETEVEDAVKFTVEKHGKLDVLFSNAGVL-EPLESFLDFDLERFDRIMAVNVRGAAAF 122

Query:   135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +KHAAR M+ + T+G+I+   SV+  IGG G H YT SKH ++GL ++   +LGKYGIRV
Sbjct:   123 IKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRV 181

Query:   194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
             N V+PYAVAT +  +H   +E T   +  +  F A+   ++G  L A+ VA   LFLASD
Sbjct:   182 NGVAPYAVATPMT-SH---DEVTGKQLEDY--FDAKGI-LKGMVLKASHVAQVALFLASD 234

Query:   254 EARYISGTNLMVDGGFTSVNHS 275
             ++ YISG NL VDGG+T V  S
Sbjct:   235 DSAYISGQNLAVDGGYTVVKPS 256

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088419 AT3G26760 [Arabidopsis thaliana (taxid:3702)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 113/266 (42%), Positives = 166/266 (62%)

Query:    10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF 69
             S + ++L G+VA+ITGGA+GIG++T   F   GA+V I D+ +  G  V   LG      
Sbjct:    30 STSSRKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSA--AH 87

Query:    70 FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINV 128
             F  CDVT+EE +  AV+  V + G LD+M+N+AGIS     P I + D+  ++KV  +NV
Sbjct:    88 FLRCDVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNV 147

Query:   129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
             +G   G+KHAAR MIP   G+I+ + S++G +GGLGPHAY+ SK  + G+ K VA+EL K
Sbjct:   148 RGTVLGIKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCK 207

Query:   189 YGIRVNCVSPYAVATGLALAHLPE----EERTEDAMVGFRNFVARNANMQGTELTANDVA 244
             +G+R+NC+SP  + T L L    E        E+ ++   N       ++G +    DVA
Sbjct:   208 HGLRINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVN---ATGELKGEKCEEIDVA 264

Query:   245 NAVLFLASDEARYISGTNLMVDGGFT 270
              A L+LASD+A++++G NL+VDGGFT
Sbjct:   265 KAALYLASDDAKFVTGHNLVVDGGFT 290

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3667	0.8535	0.9715	yes	no
Q8KWS9	BACC_BACAM	1, ., -, ., -, ., -	0.3513	0.8857	0.9763	yes	no
F1SWA0	ZERSY_ZINZE	1, ., 1, ., 1, ., 3, 2, 6	0.6503	0.95	0.9962	N/A	no
Q6GHK4	FABG_STAAR	1, ., 1, ., 1, ., 1, 0, 0	0.3281	0.8392	0.9552	yes	no
Q5HGK2	FABG_STAAC	1, ., 1, ., 1, ., 1, 0, 0	0.3281	0.8392	0.9552	yes	no
Q8KWT4	BACC2_BACIU	1, ., -, ., -, ., -	0.3643	0.8857	0.9802	yes	no
P69166	HSD_MYCBO	1, ., 1, ., 1, ., 5, 3	0.3818	0.8357	0.9	yes	no
P69167	HSD_MYCTU	1, ., 1, ., 1, ., 5, 3	0.3818	0.8357	0.9	yes	no
P99093	FABG_STAAN	1, ., 1, ., 1, ., 1, 0, 0	0.3281	0.8392	0.9552	yes	no
P0A0I0	FABG_STAAW	1, ., 1, ., 1, ., 1, 0, 0	0.3281	0.8392	0.9552	yes	no
P0A0H9	FABG_STAAM	1, ., 1, ., 1, ., 1, 0, 0	0.3281	0.8392	0.9552	yes	no
Q9C826	ABA2_ARATH	1, ., 1, ., 1, ., 2, 8, 8	0.7222	0.9535	0.9368	yes	no
Q6G9Y2	FABG_STAAS	1, ., 1, ., 1, ., 1, 0, 0	0.3281	0.8392	0.9552	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.3153	0.8464	0.9556	yes	no
P50941	FABG_RICPR	1, ., 1, ., 1, ., 1, 0, 0	0.3590	0.8428	0.9792	yes	no
Q9MYP6	DHB14_BOVIN	1, ., 1, ., 1, ., -	0.3696	0.8571	0.8888	yes	no
P39640	BACC_BACSU	1, ., -, ., -, ., -	0.3643	0.8857	0.9802	yes	no
P0A2D1	UCPA_SALTY	1, ., -, ., -, ., -	0.3381	0.8321	0.8859	yes	no
P38004	FABG_CHLTR	1, ., 1, ., 1, ., 1, 0, 0	0.3169	0.8285	0.9354	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.1.1.288	0.991
3rd Layer	1.3.1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.47	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.28	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00010285	xanthoxin dehydrogenase (EC-1.1.1.288) (281 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XIX.2346.1	hypothetical protein (508 aa)						•			0.899
	gw1.IX.617.1	hypothetical protein (497 aa)						•			0.899
	gw1.IX.609.1	hypothetical protein (498 aa)						•			0.899
	gw1.146.74.1	9-cis-epoxycarotenoid dioxygenase (EC-1.13.11.51) (570 aa)						•			0.899
	gw1.1095.4.1	hypothetical protein (497 aa)						•			0.899
	fgenesh4_pm.C_LG_XI000115	9-cis-epoxycarotenoid dioxygenase (EC-1.13.11.51) (502 aa)						•			0.899
	eugene3.00110845	9-cis-epoxycarotenoid dioxygenase (EC-1.13.11.51) (592 aa)						•			0.899
	eugene3.00081696	hypothetical protein (214 aa)			•						0.460

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	280
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	0.0
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-127
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-77
cd05233	234	cd05233, SDR_c, classical (c) SDRs	7e-69
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-67
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-66
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	5e-61
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-60
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	1e-60
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-60
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-58
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-58
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	3e-58
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	7e-56
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	6e-55
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-54
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-53
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	5e-53
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	7e-53
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-52
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	6e-52
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-51
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	3e-50
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	7e-50
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	7e-50
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	9e-50
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	7e-49
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-48
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	5e-48
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-47
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-47
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-47
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	4e-47
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	5e-47
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-46
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	3e-46
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	8e-46
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-45
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	3e-44
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	5e-44
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	9e-44
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-43
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-43
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	4e-43
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	6e-43
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-43
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	9e-43
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-42
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-42
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-42
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	3e-42
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-41
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-41
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	3e-41
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	3e-41
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	8e-41
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	3e-40
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	3e-40
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	6e-40
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	6e-40
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-40
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	3e-39
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	3e-39
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	3e-39
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-39
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	4e-39
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	6e-39
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	1e-38
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-38
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-38
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-38
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	4e-38
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	6e-38
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	6e-38
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	9e-38
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-37
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-37
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-37
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-37
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-36
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-36
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-36
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-36
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-36
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	5e-36
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	1e-35
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-35
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	3e-35
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-35
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	3e-35
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	4e-35
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-34
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-34
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-34
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-34
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	3e-33
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	4e-33
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-33
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	8e-33
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	9e-33
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-32
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-32
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-32
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	6e-32
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	6e-32
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-31
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	2e-31
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	5e-31
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	6e-31
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	6e-31
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	6e-31
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	7e-31
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	8e-31
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	9e-31
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	9e-31
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-30
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-30
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-30
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-29
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-29
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-29
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-29
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	4e-29
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	4e-29
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	1e-28
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-28
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	6e-28
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	9e-28
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	9e-28
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-27
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-27
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	4e-27
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-26
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	2e-26
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-26
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-26
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	5e-26
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	6e-26
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	7e-26
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	9e-26
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	1e-25
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-25
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-25
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	3e-25
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	9e-25
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-24
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-24
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-24
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	3e-24
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	3e-24
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	4e-24
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	5e-24
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	7e-24
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-23
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-23
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-23
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	2e-23
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-23
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	3e-23
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-23
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	8e-23
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	8e-23
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	8e-23
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-22
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	3e-22
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	3e-22
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	9e-22
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-21
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-21
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	7e-21
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	1e-20
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-20
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	3e-20
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	4e-20
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	7e-20
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	9e-20
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-19
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-19
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	3e-19
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	8e-19
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	9e-19
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-18
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	1e-18
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-18
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	3e-18
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	4e-18
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	1e-17
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	3e-17
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	6e-17
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	1e-16
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-16
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-16
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	5e-16
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	1e-15
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-15
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	2e-15
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	5e-15
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	7e-15
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	9e-15
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-14
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-14
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	4e-14
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	5e-14
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	5e-14
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	1e-13
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-13
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-13
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-13
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	4e-13
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	4e-13
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	7e-13
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	8e-13
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	3e-12
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	3e-12
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	3e-12
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	6e-12
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	1e-11
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	2e-11
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-10
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	1e-10
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	2e-10
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	2e-10
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-10
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	3e-10
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	5e-10
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	9e-10
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-09
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	1e-09
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	6e-09
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	9e-09
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-08
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	5e-08
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	7e-08
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	7e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	1e-07
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	2e-07
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	5e-07
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	8e-07
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	1e-06
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	2e-06
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-06
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	3e-06
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	4e-06
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	7e-06
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	7e-06
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	7e-06
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	7e-06
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	7e-06
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	1e-05
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	1e-05
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	2e-05
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	2e-05
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	3e-05
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	4e-05
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	8e-05
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	1e-04
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	1e-04
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-04
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	2e-04
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	2e-04
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	4e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	5e-04
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	0.003
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	0.004

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  508 bits (1310), Expect = 0.0
 Identities = 216/280 (77%), Positives = 245/280 (87%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+ ++S+ SS   QRL+G+VAL+TGGATGIGES VRLFHKHGAKVCI D+QD+LGQ VC 
Sbjct: 1   MATASSSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCD 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLGGEP+  F HCDVT E+DV  AVD TV+KFGTLDIMVNNAG++G PCPDIR  +LSEF
Sbjct: 61  SLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           EKVFD+NVKGVF GMKHAARIMIP  KG+I+S+CSVA AIGGLGPHAYTGSKHAVLGL +
Sbjct: 121 EKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTR 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           +VAAELGK+GIRVNCVSPYAV T LALAHLPE+ERTEDA+ GFR F  +NAN++G ELT 
Sbjct: 181 SVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTV 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +DVANAVLFLASDEARYISG NLM+DGGFT  NHSLRVFR
Sbjct: 241 DDVANAVLFLASDEARYISGLNLMIDGGFTCTNHSLRVFR 280

Length = 280

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  361 bits (927), Expect = e-127
 Identities = 156/257 (60%), Positives = 189/257 (73%), Gaps = 9/257 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VA+ITGGA+GIGE+T RLF KHGA+V IAD+ D+ GQ V   LG +PD  F HCD
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELG-DPDISFVHCD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT E DV +AVD  V +FG LDIM NNAG+ GAPC  I E  L EFE+V D+NV G F G
Sbjct: 60  VTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLG 119

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            KHAAR+MIP  KG+I+S+ SVAG +GGLGPHAYT SKHAVLGL ++ A ELG++GIRVN
Sbjct: 120 TKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVN 179

Query: 195 CVSPYAVATGLALAH-LPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           CVSPY VAT L  A    E+E  E+A+ G        AN++GT L   D+A AVL+LASD
Sbjct: 180 CVSPYGVATPLLTAGFGVEDEAIEEAVRG-------AANLKGTALRPEDIAAAVLYLASD 232

Query: 254 EARYISGTNLMVDGGFT 270
           ++RY+SG NL+VDGG T
Sbjct: 233 DSRYVSGQNLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  233 bits (597), Expect = 9e-77
 Identities = 99/263 (37%), Positives = 139/263 (52%), Gaps = 20/263 (7%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+VA++TG ++GIGE   R F   GA+V + D  +   ++V   +           
Sbjct: 1   MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAA 60

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV+ E DV +AV   +E+FG++DI+VNNAG +    P + + D +EF+++F +NVK  + 
Sbjct: 61  DVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGP-LLDVDEAEFDRIFAVNVKSPYL 119

Query: 134 GMKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
             + A   M  +  G I+++ S AG     GLG   Y  SK AV+ L K +AAELG   I
Sbjct: 120 WTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLG--WYNASKGAVITLTKALAAELGPDKI 177

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAV 247
           RVN V+P  V TGL       E   E           R   +    L    T  D+ANA 
Sbjct: 178 RVNAVAPVVVETGLL-EAFMGEPTPE----------NRAKFLATIPLGRLGTPEDIANAA 226

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
           LFLASDEA +I+G  L+VDGG  
Sbjct: 227 LFLASDEASWITGVTLVVDGGRC 249

Length = 251

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  212 bits (542), Expect = 7e-69
 Identities = 94/246 (38%), Positives = 131/246 (53%), Gaps = 12/246 (4%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           AL+TG ++GIG +  R   + GAKV +AD  +    ++        +      DV+ EED
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEED 60

Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
           V + V+  +E+FG LDI+VNNAGI+      + E    ++++V D+N+ GVF   + A  
Sbjct: 61  VEALVEEALEEFGRLDILVNNAGIARPG--PLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 141 IMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA 200
            M  Q  G I++I SVAG     G  AY  SK A+ GL +++A EL  YGIRVN V+P  
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178

Query: 201 VATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 260
           V T +     PEE   E             A   G   T  +VA AV+FLASDEA YI+G
Sbjct: 179 VDTPMLAKLGPEEAEKE----------LAAAIPLGRLGTPEEVAEAVVFLASDEASYITG 228

Query: 261 TNLMVD 266
             + VD
Sbjct: 229 QVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  209 bits (535), Expect = 2e-67
 Identities = 90/258 (34%), Positives = 128/258 (49%), Gaps = 18/258 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCH 72
             L G+ AL+TG + GIG +        GAKV I D  +   + +   L     +     
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGV 131
            DV+ E  V + ++  VE FG LDI+VNNAGI+  A  P + E D   +++V D+N+ G 
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEED---WDRVIDVNLTGT 117

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F+ ++ A   MI    G I++I SV+G  G  G   Y+ +K  V+G  K +A EL   GI
Sbjct: 118 FNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGI 177

Query: 192 RVNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
            VN V+P  + T      LPEE + E    +                    +VANAV FL
Sbjct: 178 TVNAVAPGFIDTD-MTEGLPEEVKAEILKEIPLGRLG-----------QPEEVANAVAFL 225

Query: 251 ASDEARYISGTNLMVDGG 268
           ASD A YI+G  + V+GG
Sbjct: 226 ASDAASYITGQVIPVNGG 243

Length = 246

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  207 bits (528), Expect = 2e-66
 Identities = 96/261 (36%), Positives = 143/261 (54%), Gaps = 17/261 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGGEP-DTFFC 71
            +L+G+VA++TG + GIG +   L  K GAKV IA D+ +   Q++ + +  E  D    
Sbjct: 1   MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAV 60

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKG 130
             DV+ EEDV + V+  VEKFG +DI+VNNAGIS       + +    E+++V D+N+ G
Sbjct: 61  KADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGL---VTDMTDEEWDRVIDVNLTG 117

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           V    ++A   MI +  G I++I S+ G IG      Y+ SK AV    K +A EL   G
Sbjct: 118 VMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSG 177

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVN V+P A+ T +  +   EE++   A       + +            ++A  VLFL
Sbjct: 178 IRVNAVAPGAIDTEM-WSSFSEEDKEGLAEEIPLGRLGK----------PEEIAKVVLFL 226

Query: 251 ASDEARYISGTNLMVDGGFTS 271
           ASD+A YI+G  + VDGG+T 
Sbjct: 227 ASDDASYITGQIITVDGGWTC 247

Length = 247

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  193 bits (492), Expect = 5e-61
 Identities = 99/261 (37%), Positives = 137/261 (52%), Gaps = 14/261 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ---QVCQSLGGEPDTFFC 71
              G+VAL+TGGA GIG +T   F + GAKV +AD     G+    + +  GGE    F 
Sbjct: 4   TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGE--ALFV 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            CDVT++ +V + V+ T+  +G LD   NNAGI       + E   +EF+ +  +NVKGV
Sbjct: 62  ACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQ-GRLAEGSEAEFDAIMGVNVKGV 120

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           +  MK+   +M+ Q  G I++  SVAG         Y  SKHAV+GL K+ A E  K GI
Sbjct: 121 WLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGI 180

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN V P  + T +         R  +A      F A   +  G      +VA+AVL+L 
Sbjct: 181 RVNAVCPAVIDTDMF-------RRAYEADPRKAEFAA-AMHPVGRIGKVEEVASAVLYLC 232

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           SD A + +G  LMVDGG T+ 
Sbjct: 233 SDGASFTTGHALMVDGGATAQ 253

Length = 253

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  192 bits (490), Expect = 1e-60
 Identities = 88/258 (34%), Positives = 132/258 (51%), Gaps = 17/258 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTF-FC 71
             L+GRVAL+TG A G+G +      + GA V +     +   +++ +++          
Sbjct: 2   GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAV 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKG 130
             DVT +  + +AV   VE+FG +DI+VNNAGI    P  D+ +    E+++V D+N+ G
Sbjct: 62  QADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDD---EWDEVIDVNLSG 118

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           VFH ++     M  Q  G I++I SVAG  G  G   Y  +K  ++GL K +A EL +YG
Sbjct: 119 VFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYG 178

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           I VN V+P  + T +  A + E    +DA               G   T  D+A AV FL
Sbjct: 179 ITVNMVAPGDIDTDMKEATIEEAREAKDAETPL-----------GRSGTPEDIARAVAFL 227

Query: 251 ASDEARYISGTNLMVDGG 268
            SD + YI+G  + V GG
Sbjct: 228 CSDASDYITGQVIEVTGG 245

Length = 249

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  192 bits (489), Expect = 1e-60
 Identities = 95/261 (36%), Positives = 136/261 (52%), Gaps = 16/261 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+VA++TGGA G+G +  RL    GAKV ++D+ D  GQ     LG      F H 
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDA--ARFFHL 58

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT E+   + VD   E FG LD++VNNAGI       +    L E+ ++ DIN+ GVF 
Sbjct: 59  DVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGG--TVETTTLEEWRRLLDINLTGVFL 116

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK--YGI 191
           G +     M     G+II++ S+ G +G     AY  SK AV GL K+ A E     YGI
Sbjct: 117 GTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGI 176

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN V P  + T +    L  +    +                G     +++A AV++LA
Sbjct: 177 RVNSVHPGYIYTPMTDELLIAQGEMGN----------YPNTPMGRAGEPDEIAYAVVYLA 226

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           SDE+ +++G+ L+VDGG+T+ 
Sbjct: 227 SDESSFVTGSELVVDGGYTAG 247

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  191 bits (487), Expect = 3e-60
 Identities = 91/260 (35%), Positives = 130/260 (50%), Gaps = 17/260 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGEPDTFFC- 71
             L G+VAL+TG + GIG +        GA V I     +   + +   +G         
Sbjct: 1   MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAV 60

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKG 130
             DV+  E V  AVD    +FG +DI+VNNAGI+       +      ++++V D N+ G
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNL---LMRMKEEDWDRVIDTNLTG 117

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           VF+  K  AR M+ Q  G II+I SV G +G  G   Y  SK  V+G  K++A EL   G
Sbjct: 118 VFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRG 177

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           I VN V+P  + T +  A LPE+ +  +A++             G      ++A+AV FL
Sbjct: 178 ITVNAVAPGFIETDMTDA-LPEDVK--EAILA-----QIPLGRLG---QPEEIASAVAFL 226

Query: 251 ASDEARYISGTNLMVDGGFT 270
           ASDEA YI+G  L V+GG  
Sbjct: 227 ASDEAAYITGQTLHVNGGMV 246

Length = 248

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  186 bits (474), Expect = 2e-58
 Identities = 100/254 (39%), Positives = 136/254 (53%), Gaps = 10/254 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VA++TG  +G GE   R F + GA+V IAD+  +  ++V   +G          D
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIG--EAAIAIQAD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VTK  DV + V+  + KFG LDI+VNNAGI+    P + E D  EF++VF +NVK ++  
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKP-MLEVDEEEFDRVFAVNVKSIYLS 118

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            +     M  Q  G II+I S AG     G   Y  SK  V+   K +A EL    IRVN
Sbjct: 119 AQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVN 178

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           C+ P A  T L    + E+  T +    FR  +       G   T +D+ANA L+LASDE
Sbjct: 179 CLCPVAGETPLLSMFMGED--TPENRAKFRATIP-----LGRLSTPDDIANAALYLASDE 231

Query: 255 ARYISGTNLMVDGG 268
           A +I+G  L VDGG
Sbjct: 232 ASFITGVALEVDGG 245

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  186 bits (474), Expect = 3e-58
 Identities = 91/259 (35%), Positives = 120/259 (46%), Gaps = 14/259 (5%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH- 72
           + L GRVAL+TG A GIG +        GA+V + D+  +      + +           
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQ 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV     + +AV   VE FG LDI+V NAGI     P   E D  ++E+V D+N+ G F
Sbjct: 62  VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFP-LTP-FAEMDDEQWERVIDVNLTGTF 119

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              + A   +I    G I+   SVAG   G  G   Y  SK  ++G  + +A EL    I
Sbjct: 120 LLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNI 179

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            VN V P  V T     +L + +  E             A   G      D+A AVLFLA
Sbjct: 180 TVNSVHPGGVDTP-MAGNLGDAQWAEAIA---------AAIPLGRLGEPEDIAAAVLFLA 229

Query: 252 SDEARYISGTNLMVDGGFT 270
           SDEARYI+G  L VDGG T
Sbjct: 230 SDEARYITGQTLPVDGGAT 248

Length = 251

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  186 bits (473), Expect = 3e-58
 Identities = 96/263 (36%), Positives = 133/263 (50%), Gaps = 20/263 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-----QQVCQSLGGEPDTF 69
            L G+VAL+TG ++GIG +  R   + GA+V +A  +             +  GG     
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGG-RAA 60

Query: 70  FCHCDVT-KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
               DV+  EE V + V    E+FG +DI+VNNAGI+G   P + E    ++++V D+N+
Sbjct: 61  AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAP-LEELTEEDWDRVIDVNL 119

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            G F   + A  +M    K  I++I SVAG  G  G  AY  SK A++GL K +A EL  
Sbjct: 120 LGAFLLTRAALPLMK---KQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAP 176

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            GIRVN V+P  + T +  A L   E      +  R  + R         T  +VA AV 
Sbjct: 177 RGIRVNAVAPGYIDTPM-TAALESAELEALKRLAARIPLGRLG-------TPEEVAAAVA 228

Query: 249 FLASD-EARYISGTNLMVDGGFT 270
           FLASD  A YI+G  L VDGG  
Sbjct: 229 FLASDEAASYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  180 bits (459), Expect = 7e-56
 Identities = 98/267 (36%), Positives = 135/267 (50%), Gaps = 22/267 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH-C 73
            L G+VAL+TG A+GIG        K GAKV IAD+ D       ++L            
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           DVT EE + + +D  VE FG +DI+VNNAGI   AP   I +    +++K+  I + G F
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAP---IEDFPTEKWKKMIAIMLDGAF 117

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K A  IM  Q  G II++ SV G +G  G  AY  +KH ++GL K VA E   +G+ 
Sbjct: 118 LTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVT 177

Query: 193 VNCVSPYAVATGL------ALAH---LPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
           VN + P  V T L       LA    + EEE  ED ++            Q    T  ++
Sbjct: 178 VNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLV--------PQKRFTTVEEI 229

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFT 270
           A+  LFLAS  A+ ++G   +VDGG+T
Sbjct: 230 ADYALFLASFAAKGVTGQAWVVDGGWT 256

Length = 258

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  177 bits (451), Expect = 6e-55
 Identities = 92/252 (36%), Positives = 131/252 (51%), Gaps = 19/252 (7%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSL---GGEPDTFFCHCDVT 76
           AL+TG + GIG +      K GAKV I     +   ++V + L   G +       CDV+
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGV--VCDVS 58

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             EDV + V+   E+ G +DI+VNNAGI+      +R  +  +++ V D N+ GVF+  +
Sbjct: 59  DREDVKAVVEEIEEELGPIDILVNNAGIT-RDNLLMRMKE-EDWDAVIDTNLTGVFNLTQ 116

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
              RIMI Q  G II+I SV G +G  G   Y  SK  V+G  K++A EL    I VN V
Sbjct: 117 AVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAV 176

Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
           +P  + T +    L E+   +  ++           + G   T  +VANAV FLASDEA 
Sbjct: 177 APGFIDTDMT-DKLSEK--VKKKILS-------QIPL-GRFGTPEEVANAVAFLASDEAS 225

Query: 257 YISGTNLMVDGG 268
           YI+G  + VDGG
Sbjct: 226 YITGQVIHVDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  176 bits (447), Expect = 2e-54
 Identities = 89/257 (34%), Positives = 132/257 (51%), Gaps = 12/257 (4%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF-FCHCD 74
           L G+VAL+TG + GIG        + GA + I    +   ++  Q +  E        CD
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCD 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+ EE + +AV+   E FG +DI+VNNAGI         E   +E+  V D+N+ GVF  
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRH--PAEEFPEAEWRDVIDVNLNGVFFV 120

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            +  AR MI Q  G II+ICS+   +GG    AY  SK  V GL K +A E  ++GI+VN
Sbjct: 121 SQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVN 180

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            ++P   AT +  A + + E  +D  +  R    R    +       D+  A +FLASD 
Sbjct: 181 AIAPGYFATEMTEAVVADPEFNDD--ILKRIPAGRWGQPE-------DLVGAAVFLASDA 231

Query: 255 ARYISGTNLMVDGGFTS 271
           + Y++G  + VDGG+ +
Sbjct: 232 SDYVNGQIIFVDGGWLA 248

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  173 bits (441), Expect = 2e-53
 Identities = 88/257 (34%), Positives = 129/257 (50%), Gaps = 26/257 (10%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-HCDVTK 77
           +VAL+TG + GIG +        GAKV + D  +    +  + +            DV+ 
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDINVKGVF 132
            E V + V+    +FG +DI+VNNAGI+       R+  L      +++ V ++N+ GVF
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGIT-------RDNLLMRMSEEDWDAVINVNLTGVF 113

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +  +   R MI +  G II+I SV G IG  G   Y  SK  V+G  K++A EL   GI 
Sbjct: 114 NVTQAVIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGIT 173

Query: 193 VNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           VN V+P  + T +  A LPE+ + +    +             G   T  +VANAV FLA
Sbjct: 174 VNAVAPGFIDTDMTDA-LPEKVKEKILKQIPLGRL--------G---TPEEVANAVAFLA 221

Query: 252 SDEARYISGTNLMVDGG 268
           SD+A YI+G  L V+GG
Sbjct: 222 SDDASYITGQVLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  172 bits (439), Expect = 5e-53
 Identities = 92/266 (34%), Positives = 129/266 (48%), Gaps = 29/266 (10%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQ---SLGGEPDTFFCHC 73
            +VA+ITG A GIG +        G  + +AD+  +   +   Q     G   +      
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGY--NAVAVGA 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVF 132
           DVT ++DV + +D  VEKFG+ D+MVNNAGI+   P   I E D    +KV+ +NV GV 
Sbjct: 60  DVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEED---LKKVYAVNVFGVL 116

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            G++ AAR        G II+  S+AG  G     AY+ SK AV GL +  A EL   GI
Sbjct: 117 FGIQAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGI 176

Query: 192 RVNCVSPYAVATGL---------ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
            VN  +P  V T +          +A  PE E             + +  + G      D
Sbjct: 177 TVNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFA--------EFSSSIPL-GRLSEPED 227

Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           VA  V FLAS+++ YI+G  ++VDGG
Sbjct: 228 VAGLVSFLASEDSDYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  172 bits (438), Expect = 7e-53
 Identities = 92/262 (35%), Positives = 133/262 (50%), Gaps = 17/262 (6%)

Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
            QRL GRVA+ITGG +GIG +T R     GA V + D+    G+     +GG     F  
Sbjct: 2   SQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGL----FVP 57

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT E+ V +  D   E +G++DI  NNAGIS      I    L  +++V D+N+  V+
Sbjct: 58  TDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVY 117

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGI 191
              K A   M+ Q KG+II+  S    +G      +YT SK  VL +++ +  +  + GI
Sbjct: 118 LCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGI 177

Query: 192 RVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           RVN + P  V T L L  L   + ER    +V     + R A          ++A AV F
Sbjct: 178 RVNALCPGPVNTPL-LQELFAKDPERAARRLVHVP--MGRFAE-------PEEIAAAVAF 227

Query: 250 LASDEARYISGTNLMVDGGFTS 271
           LASD+A +I+ +  +VDGG + 
Sbjct: 228 LASDDASFITASTFLVDGGISG 249

Length = 255

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  181 bits (461), Expect = 2e-52
 Identities = 97/266 (36%), Positives = 128/266 (48%), Gaps = 24/266 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG A GIG++T +     GA V +AD+ +   +     LGG        CDV
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDV 479

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T E  V +A +     FG +DI+V+NAGI  A    I E    ++ + FD+N  G F   
Sbjct: 480 TDEAAVQAAFEEAALAFGGVDIVVSNAGI--AISGPIEETSDEDWRRSFDVNATGHFLVA 537

Query: 136 KHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           + A RIM  Q   G+I+ I S      G    AY  +K A L L + +A ELG  GIRVN
Sbjct: 538 REAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVN 597

Query: 195 CVSPYAVATGLAL----------AH--LPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
            V+P AV  G  +          A   L EEE  E              N+   E+T  D
Sbjct: 598 GVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRAR---------NLLKREVTPED 648

Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           VA AV+FLAS      +G  + VDGG
Sbjct: 649 VAEAVVFLASGLLSKTTGAIITVDGG 674

Length = 681

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  169 bits (431), Expect = 6e-52
 Identities = 97/271 (35%), Positives = 142/271 (52%), Gaps = 19/271 (7%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+++   D +     L G+VA++TGGA+GIG +   LF   GA+V + D  ++   +V  
Sbjct: 1   MTDTKQFDLA---FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED-VAEVAA 56

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSE 119
            L G  +     CDV+  + V +AV   +  FG +DI+VN+AG++  AP  D+ E D   
Sbjct: 57  QLLGG-NAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEED--- 112

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
           ++K  DIN+KG F   +   R MI    G I+++ S AG +      AY  SK  V+G+ 
Sbjct: 113 WDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMT 172

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           K +A E G YGI VN +SP  V T L             A  G +   A+     G    
Sbjct: 173 KVLALEWGPYGITVNAISPTVVLTELGKK----------AWAGEKGERAKKLIPAGRFAY 222

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFT 270
             ++A A LFLASD A  I+G NL++DGG+T
Sbjct: 223 PEEIAAAALFLASDAAAMITGENLVIDGGYT 253

Length = 255

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  168 bits (428), Expect = 2e-51
 Identities = 87/263 (33%), Positives = 135/263 (51%), Gaps = 24/263 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFF 70
           L G+VAL+TG ++GIG++        GA V +      D  + + +++ +++GG+     
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEI-KAVGGK--AIA 57

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV+KEEDV +     +++FGTLDI+VNNAG+ G       E  L ++ KV D+N+ G
Sbjct: 58  VQADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQG-DAS-SHEMTLEDWNKVIDVNLTG 115

Query: 131 VFHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            F   + A +     + KG II++ SV   I   G   Y  SK  V  + K +A E    
Sbjct: 116 QFLCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPK 175

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTED--AMVGFRNFVARNANMQGTELTANDVANAV 247
           GIRVN ++P A+ T +      + E+  D  +++             G      ++A A 
Sbjct: 176 GIRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRI--------G---EPEEIAAAA 224

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
            +LASDEA Y++GT L VDGG T
Sbjct: 225 AWLASDEASYVTGTTLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  165 bits (420), Expect = 3e-50
 Identities = 96/259 (37%), Positives = 133/259 (51%), Gaps = 11/259 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL GRVA++TG  +GIG +T +LF + GA+V +AD      ++V  ++      F    
Sbjct: 1   MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQG 60

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVF 132
           DV   E V + VD    ++G LD++VNNAG   G       EAD   ++ V  +NV GVF
Sbjct: 61  DVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEAD---WDAVMRVNVGGVF 117

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K+A  IM  Q  G+I++  S     GG G  AY  SK A+  L + +A +    GIR
Sbjct: 118 LWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIR 177

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-NMQGTELTANDVANAVLFLA 251
           VN V+P  + T             E      R   AR+  N  G   TA +VA A LFLA
Sbjct: 178 VNAVAPGTIDTPYFRRIFARHADPEALREALR---ARHPMNRFG---TAEEVAQAALFLA 231

Query: 252 SDEARYISGTNLMVDGGFT 270
           SDE+ + +GT L+VDGG+ 
Sbjct: 232 SDESSFATGTTLVVDGGWL 250

Length = 252

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  164 bits (418), Expect = 7e-50
 Identities = 98/263 (37%), Positives = 136/263 (51%), Gaps = 26/263 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDV 75
           +VAL+TGGA GIG+       K G  V +AD+ +   ++  + +   GG+        DV
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGK--AVAYKLDV 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           + ++ V SA+D   EKFG  D+MVNNAG+  AP   I E    E +KV+++NVKGV  G+
Sbjct: 59  SDKDQVFSAIDQAAEKFGGFDVMVNNAGV--APITPILEITEEELKKVYNVNVKGVLFGI 116

Query: 136 KHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           + AAR    Q   G II+  S+AG  G     AY+ +K AV GL +  A EL   GI VN
Sbjct: 117 QAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVN 176

Query: 195 CVSPYAVATGL---------ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
              P  V T +          +A  P  E       GF  F +  A   G      DVA 
Sbjct: 177 AYCPGIVKTPMWEEIDEETSEIAGKPIGE-------GFEEFSSEIA--LGRPSEPEDVAG 227

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
            V FLAS+++ YI+G +++VDGG
Sbjct: 228 LVSFLASEDSDYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  165 bits (419), Expect = 7e-50
 Identities = 92/276 (33%), Positives = 134/276 (48%), Gaps = 39/276 (14%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G++ ++TGG++GIG + V+    +GA V  AD+    GQ          +  F   DV
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------HENYQFVPTDV 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISG--------APCPDIREADLSEFEKVFDIN 127
           +  E+V   V   +EKFG +D +VNNAGI+          P     E + + F+K+F+IN
Sbjct: 59  SSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGK-YELNEAAFDKMFNIN 117

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
            KGVF   +  AR M+ Q  G I+++ S AG  G  G   Y  +K A+    ++ A ELG
Sbjct: 118 QKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELG 177

Query: 188 KYGIRVNCVSPYAV-ATGLALAHLPEEERT---EDAMVGFRNFVAR--NANMQGTELTA- 240
           K+ IRV  V+P  + ATGL         RT   E+A+   R        A    T     
Sbjct: 178 KHNIRVVGVAPGILEATGL---------RTPEYEEALAYTRGITVEQLRAGYTKTSTIPL 228

Query: 241 ------NDVANAVLFLASDEARYISGTNLMVDGGFT 270
                 ++VA+ V +L SD A YI+G    + GG T
Sbjct: 229 GRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  164 bits (417), Expect = 9e-50
 Identities = 82/240 (34%), Positives = 122/240 (50%), Gaps = 15/240 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             L G+VALITG ++GIGE+T R   + GAKV +A  ++   + +   +G          
Sbjct: 2   TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIG--AGAALALA 59

Query: 74  -DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT    V +A++   E+FG +DI+VNNAG+  A    + EADL +++++ D NVKG+ 
Sbjct: 60  LDVTDRAAVEAAIEALPEEFGRIDILVNNAGL--ALGDPLDEADLDDWDRMIDTNVKGLL 117

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +G +     M+ +  G II++ S+AG     G   Y  +K AV   +  +  EL   GIR
Sbjct: 118 NGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIR 177

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           V  +SP  V T    + +  E   E          A      GT LT  D+A AVLF A+
Sbjct: 178 VTVISPGLVETTE-FSTVRFEGDDER---------ADKVYKGGTALTPEDIAEAVLFAAT 227

Length = 246

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  162 bits (412), Expect = 7e-49
 Identities = 88/267 (32%), Positives = 124/267 (46%), Gaps = 27/267 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGEPDTFFCHCD 74
           L G   L+TGGA+GIG +    F + GA+V + DV +  L      +            D
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAA--TAARLPGAKVTATVAD 66

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS--EFEKVFDINVKGVF 132
           V     V    D  VE+FG LD++VNNAGI+G   P     +++  ++E+   +N+ G F
Sbjct: 67  VADPAQVERVFDTAVERFGGLDVLVNNAGIAG---PTGGIDEITPEQWEQTLAVNLNGQF 123

Query: 133 HGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           +  + A  ++     G  II++ SVAG +G  G   Y  SK AV+GL K++A ELG  GI
Sbjct: 124 YFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGI 183

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL---------TAND 242
           RVN + P  V         P   R  +A             M+   L            D
Sbjct: 184 RVNAILPGIVRG-------PRMRRVIEARAQQLGIGL--DEMEQEYLEKISLGRMVEPED 234

Query: 243 VANAVLFLASDEARYISGTNLMVDGGF 269
           +A   LFLAS  ARYI+G  + VDG  
Sbjct: 235 IAATALFLASPAARYITGQAISVDGNV 261

Length = 264

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  160 bits (407), Expect = 2e-48
 Identities = 86/253 (33%), Positives = 133/253 (52%), Gaps = 7/253 (2%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDN---LGQQVCQSLGGEPDTFFCHCDV 75
           +V LITGG +G+G +T     K GAK+ + D+ +      +     +  + +      DV
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADV 63

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           + E  V + VD TVE+FG +D   NNAGI G       +    EF+KV  IN++GVF+G+
Sbjct: 64  SDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNL-TEDFGADEFDKVVSINLRGVFYGL 122

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +   ++M  Q  G I++  SV G  G      Y  +KH V+GL +N A E G+YGIR+N 
Sbjct: 123 EKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINA 182

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           ++P A+ T +    L ++   E+       FV+ N   +  E    +VA  V FL SD+A
Sbjct: 183 IAPGAILTPMVEGSL-KQLGPENPEEAGEEFVSVNPMKRFGE--PEEVAAVVAFLLSDDA 239

Query: 256 RYISGTNLMVDGG 268
            Y++   + +DGG
Sbjct: 240 GYVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  159 bits (405), Expect = 5e-48
 Identities = 95/253 (37%), Positives = 137/253 (54%), Gaps = 7/253 (2%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VA++TG   GIG +      + GA+V +AD+     Q V   + G         DV
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALA--LRVDV 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T E+ V +  +  VE+FG LD++VNNAG      P I + DL+ +++   IN++G F   
Sbjct: 59  TDEQQVAALFERAVEEFGGLDLLVNNAGAMHL-TPAIIDTDLAVWDQTMAINLRGTFLCC 117

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +HAA  MI +  G+I+++ S+AG  G  G  AY  SK A+  L + +AAEL   GIR N 
Sbjct: 118 RHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNA 177

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           ++P  + T L LA L   E       GF   + +   +QG      DVA AV+FL SD+A
Sbjct: 178 LAPGLIDTPLLLAKLAGFEGALGPG-GFHLLIHQ---LQGRLGRPEDVAAAVVFLLSDDA 233

Query: 256 RYISGTNLMVDGG 268
            +I+G  L VDGG
Sbjct: 234 SFITGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  158 bits (403), Expect = 1e-47
 Identities = 82/259 (31%), Positives = 122/259 (47%), Gaps = 21/259 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCH 72
           L G+ AL+TG A G+G +      + GA V   D      +++  +L   GG        
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGG--RAHAIA 62

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D+     V    D      G LD +VNNAGI         E D+  ++ V ++NV+G F
Sbjct: 63  ADLADPASVQRFFDAAAAALGGLDGLVNNAGI--TNSKSATELDIDTWDAVMNVNVRGTF 120

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             ++ A   +    +G I+++ S     G     AY  SK AV+G+ +++A ELG  GI 
Sbjct: 121 LMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGIT 180

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVLFL 250
           VN ++P   AT  A A++P +ER            A     +        +DVA AVLFL
Sbjct: 181 VNAIAPGLTATE-ATAYVPADER-----------HAYYLKGRALERLQVPDDVAGAVLFL 228

Query: 251 ASDEARYISGTNLMVDGGF 269
            SD AR+++G  L V+GGF
Sbjct: 229 LSDAARFVTGQLLPVNGGF 247

Length = 250

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  158 bits (402), Expect = 1e-47
 Identities = 91/259 (35%), Positives = 129/259 (49%), Gaps = 18/259 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+VAL+TGGA+GIG +  +     GA V +AD+   + ++V ++  G P      CDVT 
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTS 60

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E  V SA +  V +FG LDI+V+NAGI  A    I E  L ++ +  DIN+ G F   + 
Sbjct: 61  EAQVQSAFEQAVLEFGGLDIVVSNAGI--ATSSPIAETSLEDWNRSMDINLTGHFLVSRE 118

Query: 138 AARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
           A RIM  Q   G I+   S      G    AY+ +K A   L + +A E G+ GIRVN V
Sbjct: 119 AFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTV 178

Query: 197 SPYAVATGLAL-------AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           +P AV  G  +       A        E        +  R  N+   E+   DVA AV+ 
Sbjct: 179 NPDAVFRGSKIWEGVWRAARAKAYGLLE------EEYRTR--NLLKREVLPEDVAEAVVA 230

Query: 250 LASDEARYISGTNLMVDGG 268
           +AS++    +G  + VDGG
Sbjct: 231 MASEDFGKTTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  157 bits (400), Expect = 3e-47
 Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 16/259 (6%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFFC 71
           L G+VA+ITG ++GIG  T  LF + GA++ +    A+  +   Q   Q+   E      
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-DLSEFEKVFDINVKG 130
             D+T+EE     +  T+ KFG LDI+VNNAGI         E  D+ E++KV ++N++ 
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGI---LAKGGGEDQDIEEYDKVMNLNLRA 117

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           V + +   A   + +TKG I+++ SVAG     G   Y  SK A+    +  A EL   G
Sbjct: 118 VIY-LTKLAVPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKG 176

Query: 191 IRVNCVSPYAVATGLALAH-LPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           +RVN VSP  + TG      +PEE+  +     F +  A+  +  G   T ++VA A+ F
Sbjct: 177 VRVNSVSPGVIVTGFHRRMGMPEEQYIK-----FLSR-AKETHPLGRPGTVDEVAEAIAF 230

Query: 250 LASDEARYISGTNLMVDGG 268
           LASD + +I+G  L VDGG
Sbjct: 231 LASDASSFITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  157 bits (399), Expect = 4e-47
 Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 17/261 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCH 72
            L G+VA++TGG+ GIG +  R   + GA V I        ++  + L  +    T    
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDV+ +E V        + FG +DI++ NAGI+          +  ++ KV D+N+ GVF
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYE--QWNKVIDVNLNGVF 122

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKYG 190
           +  + AA+I   Q KG++I   S++G I        AY  SK AV+ L K++A E  KY 
Sbjct: 123 NCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYF 182

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVN +SP  + T L      E  +  ++ +       R A          ++  A L+L
Sbjct: 183 IRVNSISPGYIDTDLTDFVDKELRKKWESYIPL----KRIA-------LPEELVGAYLYL 231

Query: 251 ASDEARYISGTNLMVDGGFTS 271
           ASD + Y +G++L++DGG+T 
Sbjct: 232 ASDASSYTTGSDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  157 bits (399), Expect = 5e-47
 Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 30/274 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP---DTFFC 71
           RL G+VAL+TG A GIG +  R F + GA V +AD+   L ++   ++  +         
Sbjct: 4   RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAV 63

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP-DIREADLSEFEKVFDINVKG 130
             DVT    V +AV    E FG LD++VNNAGI+    P  + + D   + + F +++ G
Sbjct: 64  PADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDED---WRRCFAVDLDG 120

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            ++G +     M+ + +G+I++I S      I G  P  Y  +KH +LGL + +  E   
Sbjct: 121 AWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFP--YPVAKHGLLGLTRALGIEYAA 178

Query: 189 YGIRVNCVSPYAVATGLALAHL-----PEEERTEDAMVGFRNFVARNANMQ--GTELTAN 241
             +RVN ++P  + T L          P   R            A    +Q         
Sbjct: 179 RNVRVNAIAPGYIETQLTEDWWNAQPDPAAAR------------AETLALQPMKRIGRPE 226

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFTSVNHS 275
           +VA   +FLASDEA +I+ T + +DGG + + H 
Sbjct: 227 EVAMTAVFLASDEAPFINATCITIDGGRSVLYHD 260

Length = 260

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  155 bits (395), Expect = 2e-46
 Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 16/261 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD---NLGQQVCQSLGGEPDTFFCHCD 74
           G+ AL+TG A+GIG +  R     GA V + D  +       +V    GG         D
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYL--PAD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           VTKE+++   +     +FG LDI+VNNAGI   AP   I E    +++++  + +   FH
Sbjct: 59  VTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAP---IEEFPPEDWDRIIAVMLTSAFH 115

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            ++ A   M  Q  G II+I S  G +      AY  +KH ++GL K +A E+ ++GI V
Sbjct: 116 TIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITV 175

Query: 194 NCVSPYAVATGLALAHLPEEERT----EDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           N + P  V T L    + ++ +T    E+ ++     V          +T ++VA   L+
Sbjct: 176 NAICPGYVRTPLVEKQIADQAKTRGIPEEQVI---REVMLKGQPTKRFVTVDEVAETALY 232

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LASD A  I+G  +++DGG+T
Sbjct: 233 LASDAAAQITGQAIVLDGGWT 253

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  155 bits (394), Expect = 3e-46
 Identities = 91/264 (34%), Positives = 138/264 (52%), Gaps = 29/264 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFC 71
           L G+VA ITGG TGIG++  + F + GA V IA    +V +   +++  + GG       
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGR-----A 55

Query: 72  H---CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDI 126
           H   CDV   E V +AVD T+++FG +DI++NNA       P      LS   F+ V DI
Sbjct: 56  HPIQCDVRDPEAVEAAVDETLKEFGKIDILINNAA-GNFLAP---AESLSPNGFKTVIDI 111

Query: 127 NVKGVFHGMKHAA-RIMIPQTKGTIISICSVAGAIGGLGPHAYTGS-KHAVLGLNKNVAA 184
           ++ G F+  K    R++  +  G+I++I S   A  G     ++ + K  V  L +++A 
Sbjct: 112 DLNGTFNTTKAVGKRLIEAKHGGSILNI-SATYAYTGSPFQVHSAAAKAGVDALTRSLAV 170

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E G YGIRVN ++P  + T   +  L    ++E  M+  R  + R    +       ++A
Sbjct: 171 EWGPYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKMIE-RVPLGRLGTPE-------EIA 222

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           N  LFL SD A YI+GT L+VDGG
Sbjct: 223 NLALFLLSDAASYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  154 bits (391), Expect = 8e-46
 Identities = 90/271 (33%), Positives = 139/271 (51%), Gaps = 33/271 (12%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVC--QSLGGEPDTFFC 71
            L G+ AL+TGG+ G+G        + GA+V + A   + L +     ++LG +      
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWI-- 66

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKG 130
             DV  E D+    + T+E+FG +DI+VNNAG + GAP  D     +  ++KV ++NV+G
Sbjct: 67  AADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDH---PVEAWDKVMNLNVRG 123

Query: 131 VFHGMKHAARI-MIPQTKGTIISICSVAGAIGG----LGPHAYTGSKHAVLGLNKNVAAE 185
           +F   +  A+  MIP+  G II++ SVAG  G     +   AY  SK AV+   + +AAE
Sbjct: 124 LFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAE 183

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TAN 241
            G +GIRVN ++P    T +    L   ER  + +            +  T L       
Sbjct: 184 WGPHGIRVNAIAPGFFPTKMTRGTL---ERLGEDL------------LAHTPLGRLGDDE 228

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFTSV 272
           D+  A L LASD +++I+G  L VDGG ++V
Sbjct: 229 DLKGAALLLASDASKHITGQILAVDGGVSAV 259

Length = 259

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  153 bits (389), Expect = 2e-45
 Identities = 86/271 (31%), Positives = 128/271 (47%), Gaps = 35/271 (12%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+VAL+TG A+GIGE+    +   GA+V IAD++    +     +G  P       
Sbjct: 2   MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG--PAAIAVSL 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVF 132
           DVT+++ +   V   VE+FG +DI+ NNA +   AP  DI       ++++F +NVKG+F
Sbjct: 60  DVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDS---YDRLFAVNVKGLF 116

Query: 133 HGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
             M+  AR M+ Q +G  II++ S AG  G      Y  +K AV+   ++ A  L ++GI
Sbjct: 117 FLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGI 176

Query: 192 RVNCVSPYAVAT--------------GLALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
            VN ++P  V T                      E++R     V             G  
Sbjct: 177 NVNAIAPGVVDTPMWDQVDALFARYENRPPG---EKKRLVGEAVPL-----------GRM 222

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGG 268
              +D+    LFLAS +A YI      VDGG
Sbjct: 223 GVPDDLTGMALFLASADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  150 bits (380), Expect = 3e-44
 Identities = 85/261 (32%), Positives = 128/261 (49%), Gaps = 20/261 (7%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLG---GEPDTFFCHCDVT 76
           A ITG A G+G +  R   + GAKV + D+ D  G       +    GE   F    DVT
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            E    + +    +  G L ++VNNAG+       I + +L E+ +V  INV+ +F G K
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGVGSFG--AIEQIELDEWRRVMAINVESIFLGCK 119

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK--YGIRVN 194
           HA   +      +I++I SVA         AY  SK AV  L K++A +  +    +R N
Sbjct: 120 HALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCN 179

Query: 195 CVSPYAVATGLA---LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            + P  + TG+       L EEE T          +AR   + G     +DVA+AVL+LA
Sbjct: 180 SIHPTFIRTGIVDPIFQRLGEEEATRK--------LARGVPL-GRLGEPDDVAHAVLYLA 230

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           SDE+R+++G  L++DGG  ++
Sbjct: 231 SDESRFVTGAELVIDGGICAM 251

Length = 251

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  149 bits (377), Expect = 5e-44
 Identities = 84/255 (32%), Positives = 123/255 (48%), Gaps = 19/255 (7%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           AL+TGG+ GIG++      + GA V I      D    +  +  + LGG         DV
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAE-IEELGG--KAVVVRADV 57

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           ++ +DV        E+FG LD++V+NA         + E   + ++   + N+K + H  
Sbjct: 58  SQPQDVEEMFAAVKERFGRLDVLVSNAAAG--AFRPLSELTPAHWDAKMNTNLKALVHCA 115

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           + AA++M  +  G I++I S+          A   +K A+  L + +A ELG  GIRVN 
Sbjct: 116 QQAAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNA 175

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           VSP  + T  ALAH P  E   +A        A      G   T  DVA+AV FL SD A
Sbjct: 176 VSPGVIDTD-ALAHFPNREDLLEA--------AAANTPAGRVGTPQDVADAVGFLCSDAA 226

Query: 256 RYISGTNLMVDGGFT 270
           R I+G  L+VDGG +
Sbjct: 227 RMITGQTLVVDGGLS 241

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  149 bits (377), Expect = 9e-44
 Identities = 89/270 (32%), Positives = 123/270 (45%), Gaps = 24/270 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD-------- 67
           L G+VA ITG A G G +        GA +   D+   L       L    D        
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 68  ------TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFE 121
                       DV    +V + V+  VE+FG LD++V NAG+         E    +++
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYG--RSWELSEEQWD 118

Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
            V DIN+ GV+   K     MI +  G +II   SVAG     G   Y  +KH ++GL K
Sbjct: 119 TVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTK 178

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA--RNANMQGTEL 238
            +A EL +YGIRVN + PY+V T +        E   +A + +         A      +
Sbjct: 179 TLANELAEYGIRVNSIHPYSVDTPMI-----APEAMREAFLKYPEAARAFMPALPVSGFV 233

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
              DVA+AVL+LASDE+RYI+G  L VD G
Sbjct: 234 PPEDVADAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  148 bits (375), Expect = 2e-43
 Identities = 86/259 (33%), Positives = 124/259 (47%), Gaps = 16/259 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCDVT 76
            +VAL+TG   GIG +  +   + G KV I D  +   Q     L  +         DV+
Sbjct: 2   SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVS 61

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             + V +AV   V+ FG L+++VNNAG+  AP   I      +F+KV++INV GV  G++
Sbjct: 62  DRDQVFAAVRQVVDTFGDLNVVVNNAGV--APTTPIETITEEQFDKVYNINVGGVIWGIQ 119

Query: 137 HAARIMIPQTK-----GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            A        K     G II+  S AG +G      Y+ +K AV GL +  A +L   GI
Sbjct: 120 AA----QEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGI 175

Query: 192 RVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            VN  +P  V T +   +AH   E   +    G   F       + +E    DVAN V F
Sbjct: 176 TVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSE--PEDVANCVSF 233

Query: 250 LASDEARYISGTNLMVDGG 268
           LA  ++ YI+G  ++VDGG
Sbjct: 234 LAGPDSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  147 bits (374), Expect = 2e-43
 Identities = 77/210 (36%), Positives = 113/210 (53%), Gaps = 16/210 (7%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G VA++TGGA+G+G +TV      GAKV I D+ ++ G+ V        +  F   DVT 
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETV---AKLGDNCRFVPVDVTS 58

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI-----READLSEFEKVFDINVKGVF 132
           E+DV +A+ L   KFG LDI+VN AGI+ A          +   L  F++V ++N+ G F
Sbjct: 59  EKDVKAALALAKAKFGRLDIVVNCAGIAVA-AKTYNKKGQQPHSLELFQRVINVNLIGTF 117

Query: 133 HGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
           + ++ AA  M          +G II+  SVA   G +G  AY+ SK  ++G+   +A +L
Sbjct: 118 NVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDL 177

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERT 216
              GIRV  ++P    T L LA LPE+ R 
Sbjct: 178 APQGIRVVTIAPGLFDTPL-LAGLPEKVRD 206

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  147 bits (373), Expect = 4e-43
 Identities = 92/269 (34%), Positives = 125/269 (46%), Gaps = 28/269 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD--------VQDNLGQQVCQSLGGEP 66
            L G+VALITGG +GIG + V  F   GA+V + +        ++   G  V    G   
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEG--- 59

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSE-FEKV 123
                  DVT   D   AVD TV+ FG LD  V NAGI        DI    L   F+++
Sbjct: 60  -------DVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEI 112

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNV 182
           F++NVKG   G K A   +   + G++I   S +    GG GP  YT SKHAV+GL + +
Sbjct: 113 FNVNVKGYLLGAKAALPALK-ASGGSMIFTLSNSSFYPGGGGP-LYTASKHAVVGLVRQL 170

Query: 183 AAELGKYGIRVNCVSPYAVATGLA-LAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           A EL    IRVN V+P    T L   A L + E +     G  + +A    +Q       
Sbjct: 171 AYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFA-PQPE 228

Query: 242 DVANAVLFLASDE-ARYISGTNLMVDGGF 269
           D     + LAS   +R ++G  +  DGG 
Sbjct: 229 DHTGPYVLLASRRNSRALTGVVINADGGL 257

Length = 263

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  146 bits (371), Expect = 6e-43
 Identities = 85/262 (32%), Positives = 129/262 (49%), Gaps = 20/262 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ----QVCQSLGGEPDTFF 70
            L G+VA +TG  +GIG+       + GA V + D++ + G     +  ++ G       
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRR--AIQ 62

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DVT + D+ +AV  T  + G L + VN AGI+ A   +  E +  +++ V DIN+ G
Sbjct: 63  IAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAE--EMEEEQWQTVMDINLTG 120

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAI--GGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           VF   +  AR M+    G+I++I S++G I   GL    Y  SK  V+ L+K++A E   
Sbjct: 121 VFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVG 180

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            GIRVN +SP   AT       P   R E  MV           MQ      +++    +
Sbjct: 181 RGIRVNSISPGYTAT-------PMNTRPE--MVHQTKLFEEQTPMQRMA-KVDEMVGPAV 230

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           FL SD A + +G +L+VDGGF 
Sbjct: 231 FLLSDAASFCTGVDLLVDGGFV 252

Length = 254

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  145 bits (369), Expect = 9e-43
 Identities = 80/257 (31%), Positives = 122/257 (47%), Gaps = 24/257 (9%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           Q  + +  LITG A+GIG +  R F   GA+V   D QD                F    
Sbjct: 1   QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS---------GNF---- 47

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
               + D+   ++   +   ++DI+ N AGI     P + +  L E++ +FD N+   F 
Sbjct: 48  -HFLQLDLSDDLEPLFDWVPSVDILCNTAGILDDYKP-LLDTSLEEWQHIFDTNLTSTFL 105

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +     M+ +  G II++CS+A  + G G  AYT SKHA+ G  K +A +  K GI+V
Sbjct: 106 LTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQV 165

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
             ++P AV T +  A        E    G  ++VAR   +        +VA   LFLAS 
Sbjct: 166 FGIAPGAVKTPMTAADF------EPG--GLADWVARETPI-KRWAEPEEVAELTLFLASG 216

Query: 254 EARYISGTNLMVDGGFT 270
           +A Y+ GT + +DGG+T
Sbjct: 217 KADYMQGTIVPIDGGWT 233

Length = 235

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  146 bits (370), Expect = 9e-43
 Identities = 73/274 (26%), Positives = 119/274 (43%), Gaps = 43/274 (15%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCD 74
            +VA++ GG   +G        + G +V +AD+       V Q +    GE   +    D
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGAD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
            T E+ V +      E FG +D++V NAGI+ A    I +  L +F++   +N+ G F  
Sbjct: 62  ATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKA--AFITDFQLGDFDRSLQVNLVGYFLC 119

Query: 135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            +  +R+MI    +G II I S +G +G      Y+ +K   +GL +++A +L +YGI V
Sbjct: 120 AREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITV 179

Query: 194 NCV-------SP--------YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
           + +       SP        YA   G     +  +E                  +    L
Sbjct: 180 HSLMLGNLLKSPMFQSLLPQYAKKLG-----IKPDE-------------VEQYYIDKVPL 221

Query: 239 ----TANDVANAVLFLASDEARYISGTNLMVDGG 268
                  DV N +LF AS +A Y +G ++ V GG
Sbjct: 222 KRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  146 bits (370), Expect = 1e-42
 Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 20/261 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCH 72
           R   +V ++TGG+ GIG   VR F ++GAKV      +  GQ +   L   G     F  
Sbjct: 6   RYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVP 65

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDVTKEED+ + + +TVE+FG +D +VNNAG          E    EF  + ++N+   F
Sbjct: 66  CDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQT-TDETSAQEFRDLLNLNLISYF 124

Query: 133 HGMKHAARIMIP---QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
              K+A    +P   +++G II++ S+ G+IG      Y  +K A+  + K +A +  +Y
Sbjct: 125 LASKYA----LPHLRKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRY 180

Query: 190 GIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           G+RVNC+SP  + T L   LA       T D +   +      A + G   T  +   A 
Sbjct: 181 GVRVNCISPGNIWTPLWEELAAQ-----TPDTLATIKE--GELAQLLGRMGTEAESGLAA 233

Query: 248 LFLASDEARYISGTNLMVDGG 268
           LFLA+ EA + +G +L++ GG
Sbjct: 234 LFLAA-EATFCTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  145 bits (369), Expect = 1e-42
 Identities = 81/260 (31%), Positives = 123/260 (47%), Gaps = 22/260 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFF 70
           L G+VAL+TG + GIG +  +   + GA V +         + +  ++ ++ GG      
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEI-EAAGG--KAIA 57

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV+    V    D   + FG +DI+VNNAG+     P I E    EF+++F +N KG
Sbjct: 58  VQADVSDPSQVARLFDAAEKAFGGVDILVNNAGV-MLKKP-IAETSEEEFDRMFTVNTKG 115

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            F  ++ AA+ +     G II+I S   A       AY GSK AV    + +A ELG  G
Sbjct: 116 AFFVLQEAAKRLRD--GGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRG 173

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           I VN V+P  V T +  A   EE       V    +   +   +  E    D+A  V FL
Sbjct: 174 ITVNAVAPGPVDTDMFYAGKTEE------AVEG--YAKMSPLGRLGE--PEDIAPVVAFL 223

Query: 251 ASDEARYISGTNLMVDGGFT 270
           AS + R+++G  +  +GG+ 
Sbjct: 224 ASPDGRWVNGQVIRANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  145 bits (368), Expect = 2e-42
 Identities = 89/263 (33%), Positives = 128/263 (48%), Gaps = 27/263 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG--QQVCQSLGGEPDTFFCH 72
            L G+VA++TGG TG+G+       K GA + I     N    +++ +  G +    F  
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRK--VTFVQ 69

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKGV 131
            D+TK E     V   +E+FG +DI+VNNAG I  AP  + ++ D   +  V DIN+  V
Sbjct: 70  VDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDED---WNAVMDINLNSV 126

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           +H  +  A++M  Q  G II+I S+    GG    AYT SKH V GL K  A EL  Y I
Sbjct: 127 YHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNI 186

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ-----GTELTANDVANA 246
           +VN ++P  + T            T       R    RN  +      G     +D+  A
Sbjct: 187 QVNAIAPGYIKT----------ANTAP----IRADKNRNDEILKRIPAGRWGEPDDLMGA 232

Query: 247 VLFLASDEARYISGTNLMVDGGF 269
            +FLAS  + Y++G  L VDGG+
Sbjct: 233 AVFLASRASDYVNGHILAVDGGW 255

Length = 258

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  144 bits (366), Expect = 3e-42
 Identities = 85/263 (32%), Positives = 127/263 (48%), Gaps = 27/263 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L  +VA++TGG+ GIG++ V    + G+ V   D+++              D  +   DV
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP----------SYNDVDYFKVDV 53

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           + +E V   +D  + K+G +DI+VNNAGI S      I   +  E++++ ++NV G+F  
Sbjct: 54  SNKEQVIKGIDYVISKYGRIDILVNNAGIESYGA---IHAVEEDEWDRIINVNVNGIFLM 110

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K+    M+ Q KG II+I SV          AY  SKHAVLGL +++A +     IR  
Sbjct: 111 SKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCV 169

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL------TANDVANAVL 248
            V P ++ T L L    E E  +D        V R     G            +VA  V 
Sbjct: 170 AVCPGSIRTPL-LEWAAELEVGKDPEH-----VERKIREWGEMHPMKRVGKPEEVAYVVA 223

Query: 249 FLASDEARYISGTNLMVDGGFTS 271
           FLASD A +I+G  + VDGG  +
Sbjct: 224 FLASDLASFITGECVTVDGGLRA 246

Length = 258

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  143 bits (362), Expect = 1e-41
 Identities = 90/259 (34%), Positives = 128/259 (49%), Gaps = 30/259 (11%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGEPDTFFCHCDVTK 77
           +VA+ITGGA+GIG +T +L  K GAKV I D  +N G     Q++  +    F  CDVT 
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTS 60

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            E + +A    +EKFG +DI++NNAGI               +EK  D+N+ GV +    
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 138 AARIM---IPQTKGTIISICSVAGAIGGLGPH----AYTGSKHAVLGLNKNVAAEL-GKY 189
           A   M        G I++I SVA    GL P      Y+ SKH V+G  +++A  L  K 
Sbjct: 121 ALHYMDKNKGGKGGVIVNIGSVA----GLYPAPQFPVYSASKHGVVGFTRSLADLLEYKT 176

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+RVN + P    T L    LP+    E  M+        +A  Q  E     VA A+++
Sbjct: 177 GVRVNAICPGFTNTPL----LPDLVAKEAEML-------PSAPTQSPE----VVAKAIVY 221

Query: 250 LASDEARYISGTNLMVDGG 268
           L  D+ +  +G   +VDGG
Sbjct: 222 LIEDDEK--NGAIWIVDGG 238

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  148 bits (376), Expect = 2e-41
 Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 15/272 (5%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG 63
           S +   SP  +    RV  ITGGA GIG +    F   G ++ I D      +++ ++LG
Sbjct: 257 STAQAPSPLAES--PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG 314

Query: 64  GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV 123
            E  +     D+T E  V SA      ++G LD++VNNAGI+    P + ++   +F +V
Sbjct: 315 DEHLSV--QADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQS-AEDFTRV 371

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
           +D+N+ G F   + AAR+M     G I+++ S+A  +     +AY  SK AV  L++++A
Sbjct: 372 YDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLA 429

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            E    GIRVN V+P  + T   LA         D++   R  + R  +         +V
Sbjct: 430 CEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRR-RIPLGRLGD-------PEEV 481

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFTSVNHS 275
           A A+ FLAS  A Y++G  L VDGG+T+   +
Sbjct: 482 AEAIAFLASPAASYVNGATLTVDGGWTAFGDA 513

Length = 520

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  142 bits (359), Expect = 3e-41
 Identities = 91/253 (35%), Positives = 124/253 (49%), Gaps = 18/253 (7%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC---QSLGGEPDTFFCHCDVT 76
           VA++TGGA GIG++      K GA V IAD++    + V    Q  GG+       C+VT
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQ--AIGLECNVT 58

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            E+D+ + V  TV +FG + I+VNNAG  G P P        +FE  F +N+   F   +
Sbjct: 59  SEQDLEAVVKATVSQFGGITILVNNAG-GGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQ 117

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
             A  M     G I++I S++     +   AY  SK AV  + +N+A +LG  GIRVN V
Sbjct: 118 LCAPHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAV 177

Query: 197 SPYAVAT-GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           +P AV T  LA    PE ER                   G      D+ANA LFL S  +
Sbjct: 178 APGAVKTDALASVLTPEIERAMLK-----------HTPLGRLGEPEDIANAALFLCSPAS 226

Query: 256 RYISGTNLMVDGG 268
            ++SG  L V GG
Sbjct: 227 AWVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  142 bits (360), Expect = 3e-41
 Identities = 95/261 (36%), Positives = 130/261 (49%), Gaps = 20/261 (7%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQ--SLGGEPDTFF 70
            RL G+VA+ITG ++GIG +  +LF + GAKV + A  Q  L Q V +  + GGE     
Sbjct: 2   MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAV--A 59

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV  E    + V L VE+FG LDI  NNAG  G   P + E  L  + +    N+  
Sbjct: 60  LAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGP-VAEMSLEGWRETLATNLTS 118

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKY 189
            F G KH    M+ +  G++I   +  G   G  G  AY  SK  ++GL + +AAE G  
Sbjct: 119 AFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQ 178

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA--NDVANAV 247
           GIRVN + P    T +  A     E           FV   A +   +  A   ++A A 
Sbjct: 179 GIRVNALLPGGTDTPMGRAMGDTPE--------ALAFV---AGLHALKRMAQPEEIAQAA 227

Query: 248 LFLASDEARYISGTNLMVDGG 268
           LFLASD A +++GT L+VDGG
Sbjct: 228 LFLASDAASFVTGTALLVDGG 248

Length = 254

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  141 bits (357), Expect = 8e-41
 Identities = 90/254 (35%), Positives = 124/254 (48%), Gaps = 20/254 (7%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L GRV L+TGG  GIG    R F   GA V +       G++  +++ G P  F    DV
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVV------CGRRAPETVDGRPAEFHA-ADV 56

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              + V + VD  VE+ G LD++VNNAG  G+P     EA     EK+ ++N+       
Sbjct: 57  RDPDQVAALVDAIVERHGRLDVLVNNAG--GSPYALAAEASPRFHEKIVELNLLAPLLVA 114

Query: 136 KHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           + A  +M  Q   G+I++I SV+G     G  AY  +K  +L L +++A E     +RVN
Sbjct: 115 QAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAP-KVRVN 173

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V    V T  +  H  + E       G    VA    + G   T  D+A A LFLASD 
Sbjct: 174 AVVVGLVRTEQSELHYGDAE-------GIAA-VAATVPL-GRLATPADIAWACLFLASDL 224

Query: 255 ARYISGTNLMVDGG 268
           A Y+SG NL V GG
Sbjct: 225 ASYVSGANLEVHGG 238

Length = 252

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  139 bits (353), Expect = 3e-40
 Identities = 82/261 (31%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC-DVTKEE 79
            L+TG A GIG +  R   + GA+V   D       ++   L      F  +  DV    
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            V   V     ++G +D++VN AGI   GA    I      +++  F +N  GVF+  + 
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGILRLGA----IDSLSDEDWQATFAVNTFGVFNVSQA 116

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
            +  M  +  G I+++ S A  +  +G  AY  SK A+  L K +  EL  YGIR N VS
Sbjct: 117 VSPRMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVS 176

Query: 198 PYAVAT----GLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLF 249
           P +  T     L      E++    +   FR          G  L      +D+ANAVLF
Sbjct: 177 PGSTDTEMQRQLWNDEYGEQQVIAGSPEQFRL---------GIPLGKIAEPSDIANAVLF 227

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LASD A +I+  +L+VDGG T
Sbjct: 228 LASDLASHITMHDLVVDGGAT 248

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  140 bits (355), Expect = 3e-40
 Identities = 66/193 (34%), Positives = 95/193 (49%), Gaps = 5/193 (2%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             L G+V  ITGGA GIG +T R     GA+V I D+ + L ++    LG          
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLV---VGGPL 57

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT      + +D      G +D++VNNAG+   P     +   +   ++ D+NV GV  
Sbjct: 58  DVTDPASFAAFLDAVEADLGPIDVLVNNAGV--MPVGPFLDEPDAVTRRILDVNVYGVIL 115

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           G K AA  M+P+ +G ++++ S+AG I   G   Y  SKHAV+G       EL   G+ V
Sbjct: 116 GSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHV 175

Query: 194 NCVSPYAVATGLA 206
           + V P  V T L 
Sbjct: 176 SVVLPSFVNTELI 188

Length = 273

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  138 bits (351), Expect = 6e-40
 Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 17/261 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGEPDTFF-CHCDV 75
           G+VAL+T  ++GIG +  R   + GA+V I    ++NL ++    L            D+
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENL-ERAASELRAGGAGVLAVVADL 59

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  ED+   V+   + FG +DI+VNNAG  G P     E    ++ + FD+ +  V   +
Sbjct: 60  TDPEDIDRLVEKAGDAFGRVDILVNNAG--GPPPGPFAELTDEDWLEAFDLKLLSVIRIV 117

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M  +  G I++I S+              ++  ++GL K ++ EL   G+ VN 
Sbjct: 118 RAVLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNS 177

Query: 196 VSPYAVATG----LALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVLF 249
           V P  + T     L  A   +E  + +        VA    +   G      ++A  + F
Sbjct: 178 VLPGYIDTERVRRLLEARAEKEGISVEE---AEKEVASQIPLGRVGK---PEELAALIAF 231

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LAS++A YI+G  ++VDGG T
Sbjct: 232 LASEKASYITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  138 bits (350), Expect = 6e-40
 Identities = 77/254 (30%), Positives = 129/254 (50%), Gaps = 16/254 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+VALIT  A GIG +    F + GA V   D+ +       + L   P       DVT 
Sbjct: 2   GKVALITAAAQGIGRAIALAFAREGANVIATDINEEK----LKELERGPGITTRVLDVTD 57

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           +E     V    ++ G +D++ N AG        I + +  +++   ++NV+ ++  +K 
Sbjct: 58  KE----QVAALAKEEGRIDVLFNCAGF--VHHGSILDCEDDDWDFAMNLNVRSMYLMIKA 111

Query: 138 AARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
               M+ +  G+II++ SVA +I G+     Y+ +K AV+GL K+VAA+  + GIR N +
Sbjct: 112 VLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAI 171

Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
            P  V T      +  +   E+A    + F AR     G   T  +VA   ++LASDE+ 
Sbjct: 172 CPGTVDTPSLEERIQAQPDPEEA---LKAFAAR--QPLGRLATPEEVAALAVYLASDESA 226

Query: 257 YISGTNLMVDGGFT 270
           Y++GT +++DGG++
Sbjct: 227 YVTGTAVVIDGGWS 240

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  139 bits (351), Expect = 7e-40
 Identities = 95/266 (35%), Positives = 135/266 (50%), Gaps = 18/266 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           R  G+VALITGG  GIG +    F + GAKV +         +  +  G    T    CD
Sbjct: 4   RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVF--TI--KCD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFH 133
           V   + V  + ++  ++FG +D++VNNAGI    P     E D  ++ K+  IN+ G  +
Sbjct: 60  VGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMP---FEEFDEEKYNKMIKINLNGAIY 116

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIG--GLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
                  ++     G I++I S AG IG    G   Y  +K  ++ L + +A ELGKYGI
Sbjct: 117 TTYEFLPLLKLSKNGAIVNIASNAG-IGTAAEGTTFYAITKAGIIILTRRLAFELGKYGI 175

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN V+P  V T + L+   +EE  E     FRN         G      D+AN VLFLA
Sbjct: 176 RVNAVAPGWVETDMTLSGKSQEE-AEKLRELFRNKTV--LKTTGK---PEDIANIVLFLA 229

Query: 252 SDEARYISGTNLMVDGG-FTSVNHSL 276
           SD+ARYI+G  ++ DGG   ++ HSL
Sbjct: 230 SDDARYITGQVIVADGGRIDNLTHSL 255

Length = 255

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  137 bits (347), Expect = 3e-39
 Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 19/261 (7%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCH 72
           L G++AL+TG + GIGE+  +L  + GA V ++  + +  Q V  ++   GG+ +   CH
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
             + + E + +      E+ G LDI+VNNA  +      I + DL  F+K  D+N++G F
Sbjct: 66  --IGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGH-ILDTDLGAFQKTVDVNIRGYF 122

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
                A ++M  Q  G+I+++ SV G   G     Y+ +K AV+ + K  A E   +GIR
Sbjct: 123 FMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIR 182

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAM--VGFRNFVARNANMQGTELTANDVANAVLFL 250
           VN + P    T  A A    +   + A+  +  R   A  + M G           VL+L
Sbjct: 183 VNALLPGLTDTKFASALFKNDAILKQALAHIPLRR-HAEPSEMAGA----------VLYL 231

Query: 251 ASDEARYISGTNLMVDGGFTS 271
           ASD + Y +G  L VDGG+ S
Sbjct: 232 ASDASSYTTGECLNVDGGYLS 252

Length = 252

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  137 bits (346), Expect = 3e-39
 Identities = 88/262 (33%), Positives = 131/262 (50%), Gaps = 28/262 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC---QSLGGEPDTFFC 71
           RL G+ A+ITG   GIG+     F   GA V ++D+  +    V    Q LGG+   F C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ--AFAC 65

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            CD+T E+++ +  D  + K G +DI+VNNAG  G P P   +  +++F + +++NV   
Sbjct: 66  RCDITSEQELSALADFALSKLGKVDILVNNAG-GGGPKP--FDMPMADFRRAYELNVFSF 122

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           FH  +  A  M     G I++I S+A     +   +Y  SK A   L +N+A +LG+  I
Sbjct: 123 FHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182

Query: 192 RVNCVSPYAVAT-GLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANA 246
           RVN ++P A+ T  L     PE E+                 +Q T +       D+ANA
Sbjct: 183 RVNGIAPGAILTDALKSVITPEIEQ---------------KMLQHTPIRRLGQPQDIANA 227

Query: 247 VLFLASDEARYISGTNLMVDGG 268
            LFL S  A ++SG  L V GG
Sbjct: 228 ALFLCSPAASWVSGQILTVSGG 249

Length = 255

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  136 bits (345), Expect = 3e-39
 Identities = 76/258 (29%), Positives = 113/258 (43%), Gaps = 28/258 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             L G+V  ITGG  G+G +T       GA+V +          + Q+L G P       
Sbjct: 3   HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRG---AAPLSQTLPGVPADA-LRI 58

Query: 74  ---DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D+   +    AVD    +FG LD +VN AG        I + D   +++++ +NVK 
Sbjct: 59  GGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGA--FVWGTIADGDADTWDRMYGVNVKT 116

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
             +  K A   +     G I++I + A    G G  AY  +K  V  L + +AAEL   G
Sbjct: 117 TLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRG 176

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           I VN V P  + T    A +P+ +        F  +V           T   +A  + FL
Sbjct: 177 ITVNAVLPSIIDTPPNRADMPDAD--------FSRWV-----------TPEQIAAVIAFL 217

Query: 251 ASDEARYISGTNLMVDGG 268
            SDEA+ I+G ++ VDGG
Sbjct: 218 LSDEAQAITGASIPVDGG 235

Length = 239

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  143 bits (361), Expect = 4e-39
 Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 11/259 (4%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
            RV L+TG A GIG +  + F + G +V +AD      ++   SLG  PD      DV+ 
Sbjct: 5   SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG--PDHHALAMDVSD 62

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E  +    +    +FG +D++VNNAG++        +  L EF ++  IN+ G +   + 
Sbjct: 63  EAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVARE 122

Query: 138 AARIMIPQTKGT-IISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
           A R+MI Q  G  I+++ S AG +      AY+ SK AV+ L +++A E    GIRVN V
Sbjct: 123 ALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAV 182

Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
            P  V T + +A L    + + + V  R  + R            ++A AV FLASD+A 
Sbjct: 183 LPGYVRTQM-VAELERAGKLDPSAVRSRIPLGRLGR-------PEEIAEAVFFLASDQAS 234

Query: 257 YISGTNLMVDGGFTSVNHS 275
           YI+G+ L+VDGG+T    S
Sbjct: 235 YITGSTLVVDGGWTVYGGS 253

Length = 520

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  136 bits (345), Expect = 4e-39
 Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 22/257 (8%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+  L+TG ++GIG +      + GA+V  A        ++    G EP       DV  
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL----DVGD 64

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
           +     A+   +   G  D +VN AGI S     D+       F++V  +N +G     +
Sbjct: 65  DA----AIRAALAAAGAFDGLVNCAGIASLESALDMTAEG---FDRVMAVNARGAALVAR 117

Query: 137 HAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           H AR MI   + G+I+++ S A  +G     AY  SK A+  + + +  ELG +GIRVN 
Sbjct: 118 HVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNS 177

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V+P    T +A     + +++   +      + R A         +DVA  +LFL SD A
Sbjct: 178 VNPTVTLTPMAAEAWSDPQKSGPMLA--AIPLGRFA-------EVDDVAAPILFLLSDAA 228

Query: 256 RYISGTNLMVDGGFTSV 272
             +SG +L VDGG+T+ 
Sbjct: 229 SMVSGVSLPVDGGYTAR 245

Length = 245

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  136 bits (344), Expect = 6e-39
 Identities = 89/262 (33%), Positives = 122/262 (46%), Gaps = 25/262 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL-------GGEPDT 68
           L  R  LITGG+ G+G +        GA V + D+    G+    ++       GG    
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGG--KA 61

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                DV       +A+D  VE+FG LDI+VNNAGI  A      E  + E++ V D+N+
Sbjct: 62  LGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGI--ATDAAFAELSIEEWDDVIDVNL 119

Query: 129 KGVFHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
            G F+  + A   MI  +  G I++I SVAG  G  G   Y  SK  ++GL K +A EL 
Sbjct: 120 DGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELA 179

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
             GI VN V+P A+ T +A    P E       V                   ++VA  V
Sbjct: 180 PRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLG-------------EPDEVAALV 226

Query: 248 LFLASDEARYISGTNLMVDGGF 269
            FL SD A Y++G  + VDGGF
Sbjct: 227 AFLVSDAASYVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  136 bits (343), Expect = 1e-38
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 26/264 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ----VCQSLGGEPDTFFC 71
           L G+V +ITGG+TG+G +    F K  AKV I    D           +  GGE      
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAV-- 62

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DVT E DV + +   V++FGTLD+M+NNAGI     P   E  L ++ KV + N+ G 
Sbjct: 63  KGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIEN-AVPS-HEMSLEDWNKVINTNLTGA 120

Query: 132 FHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGK 188
           F G + A +  +    KG II++ SV   I    P    Y  SK  V  + + +A E   
Sbjct: 121 FLGSREAIKYFVEHDIKGNIINMSSVHEQIP--WPLFVHYAASKGGVKLMTETLAMEYAP 178

Query: 189 YGIRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            GIRVN + P A+ T +       P++    ++M+             G      ++A  
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPKQRADVESMIP-----------MGYIGKPEEIAAV 227

Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
             +LAS EA Y++G  L  DGG T
Sbjct: 228 AAWLASSEASYVTGITLFADGGMT 251

Length = 261

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  135 bits (343), Expect = 1e-38
 Identities = 94/259 (36%), Positives = 124/259 (47%), Gaps = 11/259 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L G VALITGG +G+G + V  F   GAKV + D       ++    G          D
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGD--AVVGVEGD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSE-FEKVFDINVKGV 131
           V    D   AV   VE+FG LD  + NAGI        DI E  L E F+++F INVKG 
Sbjct: 59  VRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGY 118

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
             G K A   +   T+G++I   S AG   GG GP  YT SKHAV+GL K +A EL  + 
Sbjct: 119 ILGAKAALPALY-ATEGSVIFTVSNAGFYPGGGGP-LYTASKHAVVGLVKQLAYELAPH- 175

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVN V+P  + T L       +  T  +     + + ++    G      D   A +FL
Sbjct: 176 IRVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDML-KSILPLGFAPEPEDYTGAYVFL 234

Query: 251 AS-DEARYISGTNLMVDGG 268
           AS  + R  +GT +  DGG
Sbjct: 235 ASRGDNRPATGTVINYDGG 253

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  136 bits (343), Expect = 1e-38
 Identities = 88/273 (32%), Positives = 132/273 (48%), Gaps = 38/273 (13%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +L G+ ALITG   GIGE   R+F +HGA + + D+   + +   +  G          D
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVAD 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           V     V +A+    EK G +DI+VNNAG+       D+ + D  +F    DIN+KGV++
Sbjct: 63  VRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDR-DFH--IDINIKGVWN 119

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAI-GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             K     MI +  G I+ + SV G +    G  AY  +K A++GL K++A E  + GIR
Sbjct: 120 VTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIR 179

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV----- 247
           VN + P  V T +A       E            +AR +N +  E    ++A A+     
Sbjct: 180 VNAICPGYVRTPMA-------ES-----------IARQSNPEDPESVLTEMAKAIPLRRL 221

Query: 248 ----------LFLASDEARYISGTNLMVDGGFT 270
                      FLASDE+ Y++GT  ++DGG T
Sbjct: 222 ADPLEVGELAAFLASDESSYLTGTQNVIDGGST 254

Length = 263

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  135 bits (343), Expect = 1e-38
 Identities = 79/261 (30%), Positives = 123/261 (47%), Gaps = 17/261 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             L G+VA++TGGAT IG +  R     GA+V I D+  + G  V  SLG      F   
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG--ERARFIAT 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN-VKGVF 132
           D+T +  +  AV   V +FG +DI+VN A        D   +  +++    D+N V    
Sbjct: 60  DITDDAAIERAVATVVARFGRVDILVNLACTYL---DDGLASSRADWLAALDVNLVSAAM 116

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +  AA   + +  G I++  S++      G   Y  SK A+  L +++A +L   GIR
Sbjct: 117 --LAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIR 174

Query: 193 VNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           VN VSP        +  L   +R + D        VA   ++ G      +VA  V FL 
Sbjct: 175 VNSVSP-GWTWSRVMDELSGGDRAKADR-------VAAPFHLLGRVGDPEEVAQVVAFLC 226

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           SD A +++G +  VDGG++++
Sbjct: 227 SDAASFVTGADYAVDGGYSAL 247

Length = 261

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  141 bits (357), Expect = 4e-38
 Identities = 90/268 (33%), Positives = 121/268 (45%), Gaps = 15/268 (5%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPD 67
           P  + L  RVA +TGGA GIG  T R     GA V +AD+     + V   +    G   
Sbjct: 407 PKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGR 466

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
                 DVT E+ V +A       +G +DI+VNNAGI+ +      E  L E++   DI 
Sbjct: 467 AVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSS--PFEETTLQEWQLNLDIL 524

Query: 128 VKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
             G F   + A R M  Q   G I+ I S      G    AY+ +K A   L + +AAE 
Sbjct: 525 ATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEG 584

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMV------GFRNFVARNANMQGTELTA 240
           G YGIRVN V+P AV  G  +     E R E A              A+   +    +  
Sbjct: 585 GTYGIRVNTVNPDAVLQGSGI--WDGEWREERAAAYGIPADELEEHYAKRT-LLKRHIFP 641

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
            D+A AV FLAS ++   +G  + VDGG
Sbjct: 642 ADIAEAVFFLASSKSEKTTGCIITVDGG 669

Length = 676

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  133 bits (336), Expect = 6e-38
 Identities = 80/253 (31%), Positives = 118/253 (46%), Gaps = 16/253 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+VA++TGG  GIG+     F + G KV  AD+ +  G    ++ G  P+ FF H DV  
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEG--PNLFFVHGDVAD 58

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E  V   V   +EK G +D++VNNA         +    L E++++  +N+ G +   ++
Sbjct: 59  ETLVKFVVYAMLEKLGRIDVLVNNAAR--GSKGILSSLLLEEWDRILSVNLTGPYELSRY 116

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
               +I + KG II+I S           AY  SK  ++ L   +A  LG   IRVNC+S
Sbjct: 117 CRDELI-KNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCIS 174

Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY 257
           P  + T             ED             +  G   T  D+AN VLFL   +A +
Sbjct: 175 PGWINTTEQQEFTAAPLTQED----------HAQHPAGRVGTPKDIANLVLFLCQQDAGF 224

Query: 258 ISGTNLMVDGGFT 270
           I+G   +VDGG T
Sbjct: 225 ITGETFIVDGGMT 237

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  134 bits (339), Expect = 6e-38
 Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEED 80
           +ITG A+G+G +    + + G ++ +ADV +  G++  + L     D F+  CDV     
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63

Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
           + +      EK+G +D++VNNAG++        E  L +++    IN+ GV  G K    
Sbjct: 64  LTALAQACEEKWGGIDVIVNNAGVASGG--FFEELSLEDWDWQIAINLMGVVKGCKAFLP 121

Query: 141 IMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA 200
           +   Q  G I++I S+AG + G    +Y  +K  V+ L++ +  EL    I V+ V P  
Sbjct: 122 LFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSF 181

Query: 201 VATGLALAHLPEEERTED----AMVGFRNFVARNANMQGTELTANDVANAV 247
             T L      +  R  +    A VG          ++ + +TA D+A+ +
Sbjct: 182 FQTNLL-----DSFRGPNPAMKAQVG--------KLLEKSPITAADIADYI 219

Length = 270

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  133 bits (336), Expect = 9e-38
 Identities = 92/264 (34%), Positives = 135/264 (51%), Gaps = 27/264 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           L G+VAL+TG  TG+G+       + GA  V     + +  QQ  ++LG    +     D
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSL--TAD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF-----EKVFDINVK 129
           ++  E + + VD  VE+FG +DI+VNNAGI       IR AD  EF     + V ++N+K
Sbjct: 61  LSDIEAIKALVDSAVEEFGHIDILVNNAGI-------IRRADAEEFSEKDWDDVMNVNLK 113

Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            VF   + AA+  + Q   G II+I S+    GG+   +YT SKHAV GL K +A E   
Sbjct: 114 SVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAA 173

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-NANMQGTELTANDVANAV 247
            GI VN ++P  +AT    A   +E+R           + R  A   G   T +D+    
Sbjct: 174 KGINVNAIAPGYMATNNTQALRADEDRNAA-------ILERIPAGRWG---TPDDIGGPA 223

Query: 248 LFLASDEARYISGTNLMVDGGFTS 271
           +FLAS  + Y++G  L VDGG+ +
Sbjct: 224 VFLASSASDYVNGYTLAVDGGWLA 247

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  132 bits (335), Expect = 1e-37
 Identities = 77/259 (29%), Positives = 116/259 (44%), Gaps = 8/259 (3%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEP--DTFFCHCD 74
           G+VAL+TG  +GIG    R     GA + +    D    + V   L  +      +   D
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGAD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           ++K   +   V     +FG +DI+VNNAGI   AP   I +    +++ +  +N+  VFH
Sbjct: 62  LSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAP---IEDFPTEKWDAIIALNLSAVFH 118

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + A   M  Q  G II+I SV G +      AY  +KH V+GL K VA E    G+  
Sbjct: 119 TTRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTC 178

Query: 194 NCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           N + P  V T L    +    +            +          +T   + +  +FLAS
Sbjct: 179 NAICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFLAS 238

Query: 253 DEARYISGTNLMVDGGFTS 271
           D A  I+GT + VDGG+T+
Sbjct: 239 DAASQITGTAVSVDGGWTA 257

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  132 bits (334), Expect = 1e-37
 Identities = 72/202 (35%), Positives = 103/202 (50%), Gaps = 6/202 (2%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCH 72
             L G+VALITGG+ GIG +        G KV I A  Q  L ++    L  + +     
Sbjct: 2   MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKEL-EEAAAELNNKGNVLGLA 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV  E DV  AVD  V  FG LD+++ NAG+ G   P + E    E+  V D N+ G F
Sbjct: 61  ADVRDEADVQRAVDAIVAAFGGLDVLIANAGV-GHFAP-VEELTPEEWRLVIDTNLTGAF 118

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           + +K A   +  +  G II+I S+AG     G  AY  SK  ++G ++    +L +YGI+
Sbjct: 119 YTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIK 177

Query: 193 VNCVSPYAVATGLALAHLPEEE 214
           V+ + P +VAT     H P E+
Sbjct: 178 VSTIMPGSVATHFN-GHTPSEK 198

Length = 237

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  132 bits (333), Expect = 2e-37
 Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 15/256 (5%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           +V L+TG + G+G +  R F + GA+V +   +     +   +  GE        DV   
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGE-RAIAIQADVRDR 59

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA----DLSEFEKVFDINVKGVFHG 134
           + V + ++     FG +D +VNNA I     PD R+     D  ++++  +  VKG  + 
Sbjct: 60  DQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALNL 119

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           ++        +  G +I+I +       +  H YT +K A+LG  +N+A ELG YGI VN
Sbjct: 120 LQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGITVN 179

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            VS   +    A A  P+E           + +A+   + G   T  D+A+AVLF AS  
Sbjct: 180 MVSGGLLKVTDASAATPKE---------VFDAIAQTTPL-GKVTTPQDIADAVLFFASPW 229

Query: 255 ARYISGTNLMVDGGFT 270
           AR ++G NL+VDGG  
Sbjct: 230 ARAVTGQNLVVDGGLV 245

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  132 bits (334), Expect = 2e-37
 Identities = 80/270 (29%), Positives = 116/270 (42%), Gaps = 31/270 (11%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF 70
                  G+   +TG A GIG +    F + GAKV   D            L  E   F 
Sbjct: 1   MNAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFD---------QAFLTQEDYPFA 51

Query: 71  CH-CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDIN 127
               DV+    V       + + G LD++VN AGI   GA           ++++ F +N
Sbjct: 52  TFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGA----TDSLSDEDWQQTFAVN 107

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
             G F+  +        Q  G I+++ S A  +  +G  AY  SK A+  L K V  EL 
Sbjct: 108 AGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELA 167

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ---GTEL----TA 240
            YG+R N VSP +  T +      +E+  +  + GF          Q   G  L      
Sbjct: 168 PYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPE--------QFKLGIPLGKIARP 219

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFT 270
            ++ANAVLFLASD A +I+  +++VDGG T
Sbjct: 220 QEIANAVLFLASDLASHITLQDIVVDGGAT 249

Length = 252

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  130 bits (328), Expect = 1e-36
 Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 6/190 (3%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT-FFCHCDVTKE 78
           + LITGG +GIG      F K GAKV I D+ +   ++   ++        +  CDV+K 
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           E+V  A     ++ G + I++NNAG+       + E    E EK F++N    F   K  
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGV--VSGKKLLELPDEEIEKTFEVNTLAHFWTTKAF 118

Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL---GKYGIRVNC 195
              M+ +  G I++I SVAG I   G   Y  SK A +G ++++  EL   GK GI+   
Sbjct: 119 LPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTL 178

Query: 196 VSPYAVATGL 205
           V PY + TG+
Sbjct: 179 VCPYFINTGM 188

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  130 bits (329), Expect = 1e-36
 Identities = 83/262 (31%), Positives = 134/262 (51%), Gaps = 21/262 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV--CQSLGGEPDTFFCH 72
           RL  +VA+ITG +TGIG+++     + GA V   D+ + + + V   +S GG+   +  H
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAY--H 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++ E+ V        E+FG +D++ NNAG+  A    I E  +  F+K+  ++++G F
Sbjct: 61  VDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNA-AGRIHEYPVDVFDKIMAVDMRGTF 119

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K    +M+ Q  G+II+  S +G    L    Y  +K AV+   K++A E G+ GIR
Sbjct: 120 LMTKMLLPLMMEQ-GGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIR 178

Query: 193 VNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANA 246
            N ++P  + T L   L    E+E    A   F     R      T L       +VA  
Sbjct: 179 ANAIAPGTIETPLVDKLTGTSEDE----AGKTF-----RENQKWMTPLGRLGKPEEVAKL 229

Query: 247 VLFLASDEARYISGTNLMVDGG 268
           V+FLASD++ +I+G  + +DGG
Sbjct: 230 VVFLASDDSSFITGETIRIDGG 251

Length = 272

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  130 bits (327), Expect = 2e-36
 Identities = 85/256 (33%), Positives = 127/256 (49%), Gaps = 9/256 (3%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+ ALITG A GIG +  + + + GA+V IAD+     +     +G  P       DV
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIG--PAACAISLDV 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDI-READLSEFEKVFDINVKGVFH 133
           T +  +   V   V+++G++DI+VNNA +   AP  DI RE+    ++++F INV G   
Sbjct: 59  TDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRES----YDRLFAINVSGTLF 114

Query: 134 GMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            M+  AR MI Q + G II++ S AG  G      Y  +K AV+ L ++    L ++GI 
Sbjct: 115 MMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGIN 174

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN ++P  V          +  R E+   G +  +   A   G    A D+    +FLAS
Sbjct: 175 VNAIAPGVVDGEHWDGVDAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMAIFLAS 234

Query: 253 DEARYISGTNLMVDGG 268
            +A YI      VDGG
Sbjct: 235 TDADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  129 bits (327), Expect = 2e-36
 Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 32/266 (12%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-----QQVCQSLGGEPDTFFCHC 73
           +VA++T   +GIG++   L  + G  + I    D  G     ++V +S G   +      
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEV-RSHGVRAEIR--QL 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVF 132
           D++   +   A+D  +++ G +D++VNNAG  + AP  D+   D  E+ K+F ++V G F
Sbjct: 60  DLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDM---DFDEWRKIFTVDVDGAF 116

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              + AAR M+ Q   G II+I SV       G  AYT +KHA+ GL K +A EL ++GI
Sbjct: 117 LCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGI 176

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAV 247
            VN V+P A+AT                M G  +   +  +  G  L      +++A+ V
Sbjct: 177 LVNAVAPGAIAT---------------PMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLV 221

Query: 248 LFLASDEARYISGTNLMVDGGFTSVN 273
            +L S+ A Y +G +L+VDGGF   N
Sbjct: 222 AWLCSEGASYTTGQSLIVDGGFMLAN 247

Length = 256

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  130 bits (327), Expect = 2e-36
 Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 5/258 (1%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH-CD 74
           L G+ A++TG A+GIG+       + GA V IAD+  +    V   +            D
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT E+ V + +D   E+FG++DI+V+NAGI       I     ++++K+  I+V G F  
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVN--PIENYSFADWKKMQAIHVDGAFLT 122

Query: 135 MKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            K A + M    + G +I + SV          AY  +KH +LGL + +A E  K+ +R 
Sbjct: 123 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRS 182

Query: 194 NCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           + V P  V T L    +PE+ +    +       V     + G   T  DVA  VLFL+S
Sbjct: 183 HVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSS 242

Query: 253 DEARYISGTNLMVDGGFT 270
             +  ++G + +V  G+ 
Sbjct: 243 FPSAALTGQSFVVSHGWF 260

Length = 262

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  128 bits (324), Expect = 5e-36
 Identities = 85/264 (32%), Positives = 125/264 (47%), Gaps = 21/264 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTF 69
              G+VAL+TG + GIG++      + G  + +         +   +++ ++LG +    
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI-EALGRK--AL 57

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               +V   E +        E+FG LD+ VNNA  SG   P   E + S ++   +IN K
Sbjct: 58  AVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAA-SGVLRP-AMELEESHWDWTMNINAK 115

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAELGK 188
            +    + AA++M     G IIS+ S+ G+I  L  +   G SK A+  L + +A EL  
Sbjct: 116 ALLFCAQEAAKLMEKVGGGKIISLSSL-GSIRYLENYTTVGVSKAALEALTRYLAVELAP 174

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            GI VN VS  AV T  AL H P  E   +         AR     G  +   DVANAVL
Sbjct: 175 KGIAVNAVSGGAVDTD-ALKHFPNREELLED--------ARAKTPAGRMVEPEDVANAVL 225

Query: 249 FLASDEARYISGTNLMVDGGFTSV 272
           FL S EA  I G  ++VDGG + +
Sbjct: 226 FLCSPEADMIRGQTIIVDGGRSLL 249

Length = 250

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  128 bits (323), Expect = 1e-35
 Identities = 87/263 (33%), Positives = 129/263 (49%), Gaps = 24/263 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL---GQQVCQSLGGEPDTFFCH 72
           L G++ALITG + GIG +  + + K GA +   D+   L   G    + LG E   + C 
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVC- 66

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR-----EADLSEFEKVFDIN 127
            DVT E+ V + V    ++ G +DI+VNNAGI       I+     E    +F +V DI+
Sbjct: 67  -DVTDEDGVQAMVSQIEKEVGVIDILVNNAGI-------IKRIPMLEMSAEDFRQVIDID 118

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           +   F   K     MI +  G II+ICS+   +G     AY  +K  +  L KN+A+E G
Sbjct: 119 LNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYG 178

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV-ARN-ANMQGTELTANDVAN 245
           +  I+ N + P  +AT    A L E +        F  F+ A+  A   G      D+A 
Sbjct: 179 EANIQCNGIGPGYIATP-QTAPLRELQADGSRH-PFDQFIIAKTPAARWG---DPEDLAG 233

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
             +FLASD + +++G  L VDGG
Sbjct: 234 PAVFLASDASNFVNGHILYVDGG 256

Length = 265

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  127 bits (321), Expect = 2e-35
 Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 28/263 (10%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R AL+TG A GIG++  R F   G +V   D+          +LG         CD+T  
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVA-CDLTDA 61

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGA-----PCPDIREADLSEFEKVFDINVKGVFH 133
             + +A+     + G +D++V NAG + A       P    AD         +N++  + 
Sbjct: 62  ASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADN-------ALNLEAAYL 114

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            ++     M+ +++G +++I SV G +  LG  AY+ +K  ++   K +A E G++GIR 
Sbjct: 115 CVEAVLEGMLKRSRGAVVNIGSVNG-MAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRA 173

Query: 194 NCVSPYAVATGLALAHLPEEERT-EDAMVGF--RNFVARNANMQGTELTANDVANAVLFL 250
           N V+P  V T    A +    +  E+    +  ++F            T +DVANAVLFL
Sbjct: 174 NAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFA-----------TPDDVANAVLFL 222

Query: 251 ASDEARYISGTNLMVDGGFTSVN 273
           AS  AR I+G  L VDGG T+ N
Sbjct: 223 ASPAARAITGVCLPVDGGLTAGN 245

Length = 257

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  126 bits (319), Expect = 3e-35
 Identities = 83/262 (31%), Positives = 124/262 (47%), Gaps = 22/262 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQ--SLGGEPDTFFC 71
           RL G+ ALITG + GIG +  R F   GA V I A   D L Q   +      E +    
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL----SEFEKVFDIN 127
             DV+ +ED  + +D   + +  L I+VNNAG       +IR+A +     E+  +F+ N
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAGG------NIRKAAIDYTEDEWRGIFETN 119

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           +   F   ++A  ++       I++I SV+G         Y  +K A+L + +N+A E  
Sbjct: 120 LFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWA 179

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           + GIRVN V+P+ + T L    L + +  E   V  R  + R            +VA AV
Sbjct: 180 EDGIRVNAVAPWYIRTPLTSGPLSDPDYYE--QVIERTPMRRVGE-------PEEVAAAV 230

Query: 248 LFLASDEARYISGTNLMVDGGF 269
            FL    A YI+G  + VDGGF
Sbjct: 231 AFLCMPAASYITGQCIAVDGGF 252

Length = 257

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  126 bits (319), Expect = 3e-35
 Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 15/245 (6%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF--CHCDVT 76
           +V LITG ++GIG +        G +V IA  ++       +SLG   +        DVT
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRV-IATARN---PDKLESLGELLNDNLEVLELDVT 56

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            EE + +AV   +E+FG +D++VNNAG  G   P + E  + E  ++F++NV G     +
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAGY-GLFGP-LEETSIEEVRELFEVNVFGPLRVTR 114

Query: 137 HAARIMIPQTKGTIISICSVAGAIG--GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
               +M  Q  G I+++ SVAG +    LGP  Y  SK A+  L++++  EL  +GI+V 
Sbjct: 115 AFLPLMRKQGSGRIVNVSSVAGLVPTPFLGP--YCASKAALEALSESLRLELAPFGIKVT 172

Query: 195 CVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTE-LTANDVANAVLFLA 251
            + P  V TG A        E+         R  +  NA   G+       VA+ ++   
Sbjct: 173 IIEPGPVRTGFADNAAGSALEDPEISPYAPERKEIKENAAGVGSNPGDPEKVADVIVKAL 232

Query: 252 SDEAR 256
           + E+ 
Sbjct: 233 TSESP 237

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 3e-35
 Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 17/259 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT-FFCHC 73
           R   +VA++TG A GIG++      + GA V +AD+     ++V + +  +  T      
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQV 62

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD-IREADLSEFEKVFDINVKGVF 132
           DV+  +   +  D TV  FG +D +VNNA I G    D +       ++K   +N+ G  
Sbjct: 63  DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGAL 122

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +   + M  +  G I++  S A  +       Y  +K  + GL + +A ELG   IR
Sbjct: 123 VCTRAVYKHMAKRGGGAIVNQSSTAAWLYS-NF--YGLAKVGLNGLTQQLARELGGMNIR 179

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLA 251
           VN ++P  + T       P+E      MV           +  + + T  D+    LFL 
Sbjct: 180 VNAIAPGPIDTEATRTVTPKEFV--ADMV---------KGIPLSRMGTPEDLVGMCLFLL 228

Query: 252 SDEARYISGTNLMVDGGFT 270
           SDEA +I+G    VDGG  
Sbjct: 229 SDEASWITGQIFNVDGGQI 247

Length = 250

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 4e-35
 Identities = 90/263 (34%), Positives = 124/263 (47%), Gaps = 27/263 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+ ALITGG +GIG  T R F   GA+V I        +     LG          
Sbjct: 2   SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADA 61

Query: 74  -DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGV 131
            DV  ++ +  A+    E FG LD +  NAG++  AP  D  EA    F++ F+ NVKG 
Sbjct: 62  GDVAAQKALAQALA---EAFGRLDAVFINAGVAKFAPLEDWDEAM---FDRSFNTNVKGP 115

Query: 132 FHGMKHAARIMIPQTKGTIISIC-SVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           +  ++    ++        I +  S+   IG      Y  SK A+L L K ++ EL   G
Sbjct: 116 YFLIQALLPLL---ANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRG 172

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-----TANDVAN 245
           IRVN VSP  V T L    L   E T DA+          A +Q         T  ++A 
Sbjct: 173 IRVNAVSPGPVQTPL-YGKLGLPEATLDAV---------AAQIQALVPLGRFGTPEEIAK 222

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
           AVL+LASDE+ +I G+ ++VDGG
Sbjct: 223 AVLYLASDESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  124 bits (314), Expect = 2e-34
 Identities = 73/269 (27%), Positives = 123/269 (45%), Gaps = 38/269 (14%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT--FFCHCDV 75
            ++ LITG A  IG++  +     GA++ +AD+     +Q+ + L             D+
Sbjct: 2   DKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELDI 61

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGIS----GAPCPDIREADLSEFEKVFDINVKGV 131
           T +E +   ++  +EKFG +DI++NNA  S    G+      E    ++ +V ++N+ G 
Sbjct: 62  TSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSR---FEEFPYEQWNEVLNVNLGGA 118

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGG----------LGPHAYTGSKHAVLGLNKN 181
           F   +   ++   Q KG+II+I S+ G I              P  Y+  K  ++ L K 
Sbjct: 119 FLCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKY 178

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM--QGTELT 239
           +A      GIRVN +SP     G  L + P E            F+ +          L 
Sbjct: 179 LAKYYADTGIRVNAISP-----GGILNNQPSE------------FLEKYTKKCPLKRMLN 221

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             D+  A++FL SD + Y++G NL++DGG
Sbjct: 222 PEDLRGAIIFLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  125 bits (315), Expect = 2e-34
 Identities = 80/259 (30%), Positives = 125/259 (48%), Gaps = 20/259 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA--DVQDNLGQQVCQSLGGEPDTFFCH 72
           +L G+ ALITGG +GIG +    F + GA V I     +++  ++  + +  E       
Sbjct: 23  KLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLI 82

Query: 73  CDVTKEEDVC-SAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
                +E  C   V   V++FG LDI+VNNA     P   I +    + EK F  N+  +
Sbjct: 83  PGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQ-HPQESIEDITTEQLEKTFRTNIFSM 141

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA--YTGSKHAVLGLNKNVAAELGKY 189
           F+  K A   +      +II+  SV    G   PH   Y  +K A++   + ++ +L + 
Sbjct: 142 FYLTKAALPHLKK--GSSIINTTSVTAYKG--SPHLLDYAATKGAIVAFTRGLSLQLAEK 197

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRVN V+P  + T L  +  PEE+ +E    G +  + R    Q  E     VA A +F
Sbjct: 198 GIRVNAVAPGPIWTPLIPSSFPEEKVSE---FGSQVPMGRAG--QPAE-----VAPAYVF 247

Query: 250 LASDEARYISGTNLMVDGG 268
           LAS ++ Y++G  L V+GG
Sbjct: 248 LASQDSSYVTGQVLHVNGG 266

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  125 bits (315), Expect = 2e-34
 Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 24/254 (9%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFFCHC 73
           G+ ALITG ++GIG    +   + G  + +     D  + L +++    G E +      
Sbjct: 6   GKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVI--PA 63

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D++  E +    D   E+ G +D++VNNAG          E  L E E++  +N+  +  
Sbjct: 64  DLSDPEALERLEDELKERGGPIDVLVNNAGFGTFG--PFLELSLDEEEEMIQLNILALTR 121

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             K     M+ +  G II+I S AG I       Y+ +K  VL  ++ +  EL   G++V
Sbjct: 122 LTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKV 181

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF-LAS 252
             V P    T        + + ++  ++     V          L+  DVA A L  L  
Sbjct: 182 TAVCPGPTRTEFF-----DAKGSDVYLLSPGELV----------LSPEDVAEAALKALEK 226

Query: 253 DEARYISGTNLMVD 266
            +   I G      
Sbjct: 227 GKREIIPGLPNKAL 240

Length = 265

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  123 bits (311), Expect = 5e-34
 Identities = 91/274 (33%), Positives = 135/274 (49%), Gaps = 45/274 (16%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQV--CQSLGGEPDTFFC 71
            L  +V +ITGGA G+G +      + GAK+ + D+ Q+ L + V  C +LG E   +  
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAA 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA--------------DL 117
             +VT EEDV +      E FG L+ ++NNAGI       +R+                L
Sbjct: 62  --NVTDEEDVEATFAQIAEDFGQLNGLINNAGI-------LRDGLLVKAKDGKVTSKMSL 112

Query: 118 SEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVL 176
            +F+ V D+N+ GVF   + AA  MI   +KG II+I S+A A G +G   Y+ SK  V 
Sbjct: 113 EQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA-GNMGQTNYSASKAGVA 171

Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE-ERTEDAMVGFRNFVARNANMQG 235
            +    A EL +YGIRV  ++P  + T +  A  PE  ER E  M+     V R      
Sbjct: 172 AMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLE-KMIP----VGRLG---- 222

Query: 236 TELTANDVANAVLF-LASDEARYISGTNLMVDGG 268
                 ++A+ V F + +D   Y++G  L +DGG
Sbjct: 223 ---EPEEIAHTVRFIIEND---YVTGRVLEIDGG 250

Length = 253

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score =  121 bits (305), Expect = 3e-33
 Identities = 80/237 (33%), Positives = 126/237 (53%), Gaps = 20/237 (8%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGE-PDTFFCHC-DVTK 77
            LITG ++GIGE+T R F K GAK+ +     + L Q++   LG + P        DV+ 
Sbjct: 3   VLITGASSGIGEATARRFAKAGAKLILTGRRAERL-QELADELGAKFPVKVLPLQLDVSD 61

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            E + +A++   E+F  +DI+VNNAG++    P  +EADL ++E + D NVKG+ +  + 
Sbjct: 62  RESIEAALENLPEEFRDIDILVNNAGLALGLDP-AQEADLEDWETMIDTNVKGLLNVTRL 120

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
              IMI + +G II++ S+AG     G + Y  +K AV   + N+  +L   GIRV  + 
Sbjct: 121 ILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTNIE 180

Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-QGTE-LTANDVANAVLFLAS 252
           P     GL          TE ++V F     +   + +G E LT  D+A  +L++AS
Sbjct: 181 P-----GLV--------ETEFSLVRFHGDKEKADKVYEGVEPLTPEDIAETILWVAS 224

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  121 bits (304), Expect = 4e-33
 Identities = 80/259 (30%), Positives = 119/259 (45%), Gaps = 22/259 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFF 70
           L  +VA++TG + GIG +  R     G  V +     A   D L  ++ ++ GG      
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEI-EAAGGRAIAV- 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV     V    D     FG +D++VNNAG+   P   I + DL +F++    N++G
Sbjct: 61  -QADVADAAAVTRLFDAAETAFGRIDVLVNNAGV--MPLGTIADFDLEDFDRTIATNLRG 117

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            F  ++ AAR +     G II++ +   A+   G   Y  SK AV GL   +A EL   G
Sbjct: 118 AFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRG 175

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           I VN V+P  VAT L      +     D + G    + R         T  ++A AV FL
Sbjct: 176 ITVNAVAPGPVATELFFN--GKSAEQIDQLAGL-APLERLG-------TPEEIAAAVAFL 225

Query: 251 ASDEARYISGTNLMVDGGF 269
           A  +  +++G  L V+GGF
Sbjct: 226 AGPDGAWVNGQVLRVNGGF 244

Length = 245

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  120 bits (304), Expect = 6e-33
 Identities = 86/262 (32%), Positives = 129/262 (49%), Gaps = 26/262 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGEPDTFFCHCDVTK 77
           +  L+TGG+ G+G +  R F + GA+V +   Q ++  + +   LG          DVT 
Sbjct: 6   QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDR--AIALQADVTD 63

Query: 78  EEDVCSAVDLTVEKFG-TLDIMVNNAGISGAPCPDIREA--DLS--EFEKVFDINVKGVF 132
            E V +      E FG  +  +VNNA    +   D R+   D++  +F++  + +VKG  
Sbjct: 64  REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           + ++ A   M  Q  G II+I +       +  H YT +K A+LGL +N+AAELG YGI 
Sbjct: 124 NTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGIT 183

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           VN VS   + T  A A  P+E           + +A       T L    T  + A+AVL
Sbjct: 184 VNMVSGGLLRTTDASAATPDE---------VFDLIA-----ATTPLRKVTTPQEFADAVL 229

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           F AS  AR ++G NL+VDGG  
Sbjct: 230 FFASPWARAVTGQNLVVDGGLV 251

Length = 253

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  120 bits (301), Expect = 8e-33
 Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 16/257 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGGEP-DTFFCH 72
           +L G+VA++TGGA GIG++      + GAKV I  +      + +   LG E  D +   
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV+K ED    V+  V  FG +DI+VNNAGI+       ++ +  ++E+V D+N+  VF
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDR--TFKKLNREDWERVIDVNLSSVF 120

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +        +    +G IISI S+ G  GG G   Y+ +K  +LG  K++A EL K  + 
Sbjct: 121 NTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVT 180

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN + P  + T + +A +PEE R +         VA+    +  +  A+++A  V++L  
Sbjct: 181 VNAICPGFIDTEM-VAEVPEEVRQK--------IVAKIPKKRFGQ--ADEIAKGVVYLCR 229

Query: 253 DEARYISGTNLMVDGGF 269
           D A YI+G  L ++GG 
Sbjct: 230 DGA-YITGQQLNINGGL 245

Length = 247

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  120 bits (303), Expect = 9e-33
 Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 23/238 (9%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQ----DNLGQQVCQSLGGEPDTFFCHC 73
           G+V +ITG + GIG +      + GA++ +A        +L Q+     GGE        
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQE-LADHGGEALVV--PT 57

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           DV+  E     ++  V +FG +DI+VNNAGI+  +   ++   DLS FE+V  +N  G  
Sbjct: 58  DVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELT--DLSVFERVMRVNYLGAV 115

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +   HAA   +  ++G I+ + S+AG  G      Y  SKHA+ G   ++  EL   G+ 
Sbjct: 116 Y-CTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVA 174

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE-LTANDVANAVLF 249
           V  V P  VAT                 +         + MQ ++ ++A + A A+L 
Sbjct: 175 VTVVCPGFVAT-----------DIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILP 221

Length = 263

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score =  119 bits (299), Expect = 1e-32
 Identities = 85/237 (35%), Positives = 111/237 (46%), Gaps = 28/237 (11%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE 79
           AL+TG + GIGE+T RL H  G +V I A  +  L     Q L G         DV  E 
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG---VLGLAGDVRDEA 59

Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA 139
           DV  AVD   E FG LD +VNNAG+ G   P + E    E+  V D N+ G F+ +  AA
Sbjct: 60  DVRRAVDAMEEAFGGLDALVNNAGV-GVMKP-VEELTPEEWRLVLDTNLTGAFYCIHKAA 117

Query: 140 RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPY 199
             ++ +  GTI+++ S+AG     G  AY  SK  +LGL++    +L +  IRV  V P 
Sbjct: 118 PALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPG 177

Query: 200 AVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
           +V TG A          E                Q  +L   DVA AVLF     AR
Sbjct: 178 SVDTGFA-------GSPEG---------------QAWKLAPEDVAQAVLFALEMPAR 212

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  119 bits (301), Expect = 1e-32
 Identities = 77/262 (29%), Positives = 117/262 (44%), Gaps = 24/262 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFF 70
           L G+VAL+TG A G+G    R     GA V +     A ++  +          E   F 
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAF- 67

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D+  EE V +A      + G LDI+VNN G        + E D +    + + ++  
Sbjct: 68  ---DIADEEAVAAAFARIDAEHGRLDILVNNVGARDRR--PLAELDDAAIRALLETDLVA 122

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
                + AA+ M  Q  G II+I S+AG +   G   Y  +K  + GL + +AAE G +G
Sbjct: 123 PILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHG 182

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVL 248
           I  N ++P   AT              D  VG   ++A+   +   G      ++A A +
Sbjct: 183 ITSNAIAPGYFATE------TNAAMAADPAVG--PWLAQRTPLGRWG---RPEEIAGAAV 231

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           FLAS  A Y++G  L VDGG++
Sbjct: 232 FLASPAASYVNGHVLAVDGGYS 253

Length = 256

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  119 bits (299), Expect = 2e-32
 Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 31/261 (11%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
            ++TG A GIG +  R   + GA V   D+   L  +    L   P       DV     
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTP------LDVADAAA 54

Query: 81  VCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           V       + + G +D +VN AG+   GA  P   E    ++E+ F +NV GVF+ ++  
Sbjct: 55  VREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTE----DWEQTFAVNVTGVFNLLQAV 110

Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSP 198
           A  M  +  G I+++ S A  +  +   AY  SK A+  L+K +  EL  YG+R N VSP
Sbjct: 111 APHMKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSP 170

Query: 199 YAVATGLALAHLPEEERTEDAMVG----FR-----NFVARNANMQGTELTANDVANAVLF 249
            +  T +      +E+     + G    FR       +A+ A          D+ANAVLF
Sbjct: 171 GSTDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPA----------DIANAVLF 220

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LASD+A +I+  +L+VDGG T
Sbjct: 221 LASDQAGHITMHDLVVDGGAT 241

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  118 bits (296), Expect = 6e-32
 Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 14/259 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCH 72
           L  + A++TGG  GIG +T R F + GAKV + D+     ++V   +   GG    F   
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAF--A 58

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CD+T  + V +AV    +  G +D++VNNAG          + +   +E++  IN+ G  
Sbjct: 59  CDITDRDSVDTAVAAAEQALGPVDVLVNNAGWD--KFGPFTKTEPPLWERLIAINLTGAL 116

Query: 133 HGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           H M HA    M+ +  G I++I S A  +G  G   Y   K  ++  +K +A E  ++GI
Sbjct: 117 H-MHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGI 175

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            VN V P    T L        E  E     F   +       G     +D+  A+LF +
Sbjct: 176 TVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL-----GRLGQPDDLPGAILFFS 230

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD+A +I+G  L V GG T
Sbjct: 231 SDDASFITGQVLSVSGGLT 249

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  118 bits (297), Expect = 6e-32
 Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 16/234 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFCHCD 74
           G+V +ITG ++GIGE       + GA++ ++  ++   ++V   C  LG  P       D
Sbjct: 3   GKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGA-PSPHVVPLD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           ++  ED    V+  ++ FG LDI++NNAGIS        +  +    K+ ++N  G    
Sbjct: 62  MSDLEDAEQVVEEALKLFGGLDILINNAGISMR--SLFHDTSIDVDRKIMEVNYFGPVAL 119

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K A   +I +++G+I+ + S+AG IG     AY  SKHA+ G   ++ AEL +  I V 
Sbjct: 120 TKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISVT 179

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            V P  + T +A+  L  +              A+  +     ++  + A  +L
Sbjct: 180 VVCPGLIDTNIAMNALSGDGSMS----------AKMDDTTANGMSPEECALEIL 223

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  116 bits (293), Expect = 1e-31
 Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 5/197 (2%)

Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEP-DTFF 70
            Q L G+ ALITG   GIG +      K G  V  +A  ++NL + V + +         
Sbjct: 2   AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL-KAVAEEVEAYGVKVVI 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV+  E+V +A++    + G++DI++NNAGIS        E D +E+EK+  +N+ G
Sbjct: 61  ATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFG--KFLELDPAEWEKIIQVNLMG 118

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           V++  +     MI +  G II+I S AG  G     AY+ SK  VLGL +++  E+ K+ 
Sbjct: 119 VYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHN 178

Query: 191 IRVNCVSPYAVATGLAL 207
           IRV  ++P  VAT +A+
Sbjct: 179 IRVTALTPSTVATDMAV 195

Length = 239

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  116 bits (292), Expect = 2e-31
 Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 25/261 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCD 74
           L G+VA+ITG  TG+G+       K GA +    V +    Q   ++LG +    F   D
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRK--FHFITAD 63

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF-----EKVFDINVK 129
           + +++D+ S V   VE  G +DI++NNAGI       IR  DL EF     + V +IN K
Sbjct: 64  LIQQKDIDSIVSQAVEVMGHIDILINNAGI-------IRRQDLLEFGNKDWDDVININQK 116

Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            VF   +  A+  + Q   G II+I S+    GG+   +YT SK AV+GL + +A EL +
Sbjct: 117 TVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQ 176

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           Y I VN ++P  +AT    A   +  R E  +          A+  G   T +D+A   +
Sbjct: 177 YNINVNAIAPGYMATDNTAALRADTARNEAILERI------PASRWG---TPDDLAGPAI 227

Query: 249 FLASDEARYISGTNLMVDGGF 269
           FL+S  + Y++G  L VDGG+
Sbjct: 228 FLSSSASDYVTGYTLAVDGGW 248

Length = 251

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score =  115 bits (291), Expect = 5e-31
 Identities = 73/231 (31%), Positives = 101/231 (43%), Gaps = 23/231 (9%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
            ITG A+GIG +T  LF   G +V   D+ +     +   LG   + +    DVT     
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAG-NAWTGALDVTDRAAW 63

Query: 82  CSAV-DLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
            +A+ D      G LD++ NNAGI   G       +  L   ++V DINVKGV +G  HA
Sbjct: 64  DAALADFAAATGGRLDVLFNNAGILRGG----PFEDIPLEAHDRVIDINVKGVLNGA-HA 118

Query: 139 ARIMIPQTKGT-IISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
           A   +  T G  +I+  S +   G  G   Y+ +K AV GL + +  E  ++GIRV  V 
Sbjct: 119 ALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVM 178

Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           P  V T + L     E               +     G  LT  DVA AV 
Sbjct: 179 PLFVDTAM-LDGTSNEVDAG---------STKRL---GVRLTPEDVAEAVW 216

Length = 260

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 6e-31
 Identities = 85/265 (32%), Positives = 123/265 (46%), Gaps = 28/265 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           L GR AL+TG + GIG +      + GA+V +       L        G          D
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD 67

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFH 133
           VT  + V +A+D    + G +DI+VNNAG+    P  D   AD   FE++   N+  VF+
Sbjct: 68  VTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDF-PAD--AFERLLRTNISSVFY 124

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +  AR MI +  G II+I SV  A+   G   YT +K AV  L K +A +  K+G++ 
Sbjct: 125 VGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQC 184

Query: 194 NCVSPYAVATGL--ALAHLPE-----EERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
           N ++P    T L  AL   PE     E+RT     G                   ++  A
Sbjct: 185 NAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWG----------------KVEELVGA 228

Query: 247 VLFLASDEARYISGTNLMVDGGFTS 271
            +FLASD + +++G  L VDGG T+
Sbjct: 229 CVFLASDASSFVNGHVLYVDGGITA 253

Length = 255

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  115 bits (289), Expect = 6e-31
 Identities = 78/240 (32%), Positives = 122/240 (50%), Gaps = 23/240 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFC 71
           L G+VAL+TG ++GIGE+T R     GA V IA    D  + L  ++ ++ GG+      
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADEL-EAEGGK--ALVL 57

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVK 129
             DVT E+ V +AV+ TVE  G LDI+VNNAGI   G     + +AD +++ ++ D N+ 
Sbjct: 58  ELDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGP----VEDADTTDWTRMIDTNLL 113

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           G+ +    A    + + KGTI++I SVAG +       Y  +K  V   ++ +  E+ + 
Sbjct: 114 GLMYTTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTER 173

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+RV  + P  V T L   H+      E           R + +   +L A D+A AV +
Sbjct: 174 GVRVVVIEPGTVDTELR-DHITHTITKEAYE-------ERISTI--RKLQAEDIAAAVRY 223

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score =  115 bits (290), Expect = 6e-31
 Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 34/269 (12%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC--HCDV 75
            +VA++ GG   +GE       + G  V +AD+     ++V   +  E          D 
Sbjct: 2   NQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGADA 61

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T E+ V +      E F  +D++V +AGI  A    I + +L +F++   +N+ G F   
Sbjct: 62  TNEQSVIALSKGVDEIFKRVDLLVYSAGI--AKSAKITDFELGDFDRSLQVNLVGYFLCA 119

Query: 136 KHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +  +++MI    +G II I S +G +G      Y+ +K   +GL +++A +L ++GI VN
Sbjct: 120 REFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITVN 179

Query: 195 CV-------SP--------YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
            +       SP        YA   G     + E E         + ++ +    +G +  
Sbjct: 180 SLMLGNLLKSPMFQSLLPQYAKKLG-----IKESEVE-------QYYIDKVPLKRGCDY- 226

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             DV N +LF AS +A Y +G ++ + GG
Sbjct: 227 -QDVLNMLLFYASPKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 7e-31
 Identities = 80/259 (30%), Positives = 132/259 (50%), Gaps = 18/259 (6%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL-GGEPDTFFCHCD 74
           L G+ ALITG +TGIG+     + + GA+V IA    +  +++   +           CD
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V++ + V S +D    + G +DI V NAGI       + +  L EF+++ + NV GVF  
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTP--MLDMPLEEFQRLQNTNVTGVFLT 124

Query: 135 MKHAARIMIPQTK-GTIISICSVAGAIGGLGPHA--YTGSKHAVLGLNKNVAAELGKYGI 191
            + AA+ M+ Q + G II+  S++G I  +      Y  SK AV+ L K +A EL  + I
Sbjct: 125 AQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKI 184

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN VSP  + T L +    E +   +  +             G      ++A   L+LA
Sbjct: 185 RVNSVSPGYILTEL-VEPYTEYQPLWEPKIPL-----------GRLGRPEELAGLYLYLA 232

Query: 252 SDEARYISGTNLMVDGGFT 270
           S+ + Y++G+++++DGG+T
Sbjct: 233 SEASSYMTGSDIVIDGGYT 251

Length = 253

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  114 bits (288), Expect = 8e-31
 Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 7/186 (3%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD----TFFCH- 72
           G+  LITGG++GIG++  +   K GA V I    ++  ++  + +  E +          
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++  E+V  A    VEK G  D++VN AGIS        +    EFE+  D+N  G  
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGIS--IPGLFEDLTAEEFERGMDVNYFGSL 118

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +       +M  Q  G I+ + S A  +G  G  AY  SK A+ GL +++  EL  Y IR
Sbjct: 119 NVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIR 178

Query: 193 VNCVSP 198
           V+ V P
Sbjct: 179 VSVVYP 184

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  114 bits (288), Expect = 9e-31
 Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 31/267 (11%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKV--CIADVQDNLGQQVCQSLGGEPDTFFCH 72
            L G+ AL+TGG  GIG + V      GA+V  C  +      +++ + L    +  F  
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARN-----QKELDECLTEWREKGFKV 57

Query: 73  ----CDVTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADL----SEFEKV 123
               CDV+   +    +D     F G L+I+VNNAG +      IR+        ++  +
Sbjct: 58  EGSVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTN------IRKEAKDYTEEDYSLI 111

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
              N +  +H  + A  ++     G I+ I SVAG I       Y  +K A+  L +++A
Sbjct: 112 MSTNFEAAYHLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLA 171

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            E  K  IRVN V+P+ +AT L    + ++E  +         + R    +  E    +V
Sbjct: 172 CEWAKDNIRVNAVAPWVIATPLVEPVIQQKENLD-------KVIERTPLKRFGE--PEEV 222

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFT 270
           A  V FL    A YI+G  + VDGG T
Sbjct: 223 AALVAFLCMPAASYITGQIIAVDGGLT 249

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  114 bits (288), Expect = 9e-31
 Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD---TFFCHCDV 75
           ++AL+TG   GIG +  R     G +V       N   +      G  +         DV
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKE-LDV 61

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E+   A+    E+ G +DI+VNNAGI+       +     E+  V + N+  VF+  
Sbjct: 62  TDTEECAEALAEIEEEEGPVDILVNNAGITRDSV--FKRMSHQEWNDVINTNLNSVFNVT 119

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M  Q  G II+I SV G  G  G   Y+ +K  ++G  K +A+E  +YGI VNC
Sbjct: 120 QPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNC 179

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           ++P  +AT +     PE  ++    +  +              T  ++A AV FL S+ A
Sbjct: 180 IAPGYIATPMVEQMGPEVLQSIVNQIPMKRLG-----------TPEEIAAAVAFLVSEAA 228

Query: 256 RYISGTNLMVDGGF 269
            +I+G  + ++GG 
Sbjct: 229 GFITGETISINGGL 242

Length = 245

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  114 bits (287), Expect = 1e-30
 Identities = 85/259 (32%), Positives = 126/259 (48%), Gaps = 27/259 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
             G+ AL+TG   GIG +TV+   K GA+V  ++  Q +L   V +  G EP    C  D
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEP---VC-VD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           ++  +    A +  +   G +D++VNNA +  A      E     F++ FD+NV+ V H 
Sbjct: 61  LSDWD----ATEEALGSVGPVDLLVNNAAV--AILQPFLEVTKEAFDRSFDVNVRAVIHV 114

Query: 135 MKHAARIMI-PQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYGIR 192
            +  AR MI     G+I+++ S A +   L  H  Y  +K A+  L K +A ELG + IR
Sbjct: 115 SQIVARGMIARGVPGSIVNVSSQA-SQRALTNHTVYCSTKAALDMLTKVMALELGPHKIR 173

Query: 193 VNCVSPYAVAT--GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           VN V+P  V T  G      PE+ +     +    F               DV NA+LFL
Sbjct: 174 VNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFA-----------EVEDVVNAILFL 222

Query: 251 ASDEARYISGTNLMVDGGF 269
            SD++   +G+ L VDGGF
Sbjct: 223 LSDKSSMTTGSTLPVDGGF 241

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  113 bits (286), Expect = 2e-30
 Identities = 85/256 (33%), Positives = 130/256 (50%), Gaps = 19/256 (7%)

Query: 11  PAVQRLVGRVALITGGA-TGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQ--SLGGEP 66
           P    L G+V L+T  A TGIG +T R   + GA+V I+D+ +  LG+   +  +  G  
Sbjct: 10  PGHGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLG 69

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFD 125
                 CDVT E  V + +D  VE+ G LD++VNNAG+ G  P  D+ +    E+ +V D
Sbjct: 70  RVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDD---EWSRVLD 126

Query: 126 INVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           + + G F   + A R M  +   G I++  SV G     G   Y  +K  V+ L +  A 
Sbjct: 127 VTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSAL 186

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E  +YG+R+N V+P ++A    LA +   E  ++         AR A  +  E    +VA
Sbjct: 187 EAAEYGVRINAVAP-SIAMHPFLAKVTSAELLDE-------LAAREAFGRAAEPW--EVA 236

Query: 245 NAVLFLASDEARYISG 260
           N + FLASD + Y++G
Sbjct: 237 NVIAFLASDYSSYLTG 252

Length = 262

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  113 bits (286), Expect = 3e-30
 Identities = 79/268 (29%), Positives = 123/268 (45%), Gaps = 20/268 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD--VQDNLGQQVCQSLGGEPDTFFCH 72
            L  +V ++TGGA+GIG +      + GA   I      D+   +  ++L   P   F  
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQ--PRAEFVQ 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGV 131
            D+T +     AV+ TV KFG +D +VNNAG++ G       EA    F    + N+   
Sbjct: 62  VDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGL----EAGREAFVASLERNLIH- 116

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           ++ M H     +  ++G I++I S     G  G   Y  +K A L L +  A  L K G+
Sbjct: 117 YYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGV 176

Query: 192 RVNCVSPYAVATGLA---LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           RVN V P  V T L    +A   + E    A+        R   M     TA ++A+  +
Sbjct: 177 RVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHR---MT----TAEEIADTAV 229

Query: 249 FLASDEARYISGTNLMVDGGFTSVNHSL 276
           FL S+ + + +G  L VDGG+  ++ +L
Sbjct: 230 FLLSERSSHTTGQWLFVDGGYVHLDRAL 257

Length = 258

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  113 bits (284), Expect = 1e-29
 Identities = 88/270 (32%), Positives = 127/270 (47%), Gaps = 41/270 (15%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA------DVQDNL------GQQVCQS 61
            +L G+VALITGG +GIG +   LF K GA + I       D  +        G + C  
Sbjct: 42  GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVK-CLL 100

Query: 62  LGGEPDTFFCHCDVTKEEDVC-SAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           + G         DV  +E  C  AV+ TV + G LDI+VNNA     P   + +    + 
Sbjct: 101 IPG---------DV-SDEAFCKDAVEETVRELGRLDILVNNAAFQ-YPQQSLEDITAEQL 149

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           +K F  N+   FH M  AA   +P  K    II+  S+ G  G      Y+ +K A+   
Sbjct: 150 DKTFKTNIYSYFH-MTKAA---LPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIHAF 205

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            +++A  L + GIRVN V+P  + T L  +   EE+ ++    G    + R    Q  EL
Sbjct: 206 TRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQ---FGSNTPMQRPG--QPEEL 260

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
                A A +FLAS ++ YI+G  L V+GG
Sbjct: 261 -----APAYVFLASPDSSYITGQMLHVNGG 285

Length = 290

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  112 bits (281), Expect = 1e-29
 Identities = 84/263 (31%), Positives = 122/263 (46%), Gaps = 19/263 (7%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVC--QSLGGEPDTFF 70
             L  +VAL+T    GIG +  R   + GA V ++   Q N+ + V   Q  G       
Sbjct: 6   DPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTV 65

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
           CH  V K ED    V   V   G +DI+V+NA +      +I ++    ++K+ D+NVK 
Sbjct: 66  CH--VGKAEDRERLVATAVNLHGGVDILVSNAAV-NPFFGNILDSTEEVWDKILDVNVKA 122

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
                K     M  +  G+++ + SVA      GLGP  Y  SK A+LGL KN+A EL  
Sbjct: 123 TALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGP--YNVSKTALLGLTKNLAPELAP 180

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
             IRVNC++P  + T  + A   ++   E      R  + R            D A  V 
Sbjct: 181 RNIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLR--IRRLGQ-------PEDCAGIVS 231

Query: 249 FLASDEARYISGTNLMVDGGFTS 271
           FL S++A YI+G  ++V GG  S
Sbjct: 232 FLCSEDASYITGETVVVGGGTPS 254

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  111 bits (279), Expect = 2e-29
 Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 27/264 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFF-CHC 73
           L G+VA++TG  TG+G+       + G   V I  V+     +   +LG     F     
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALG---RRFLSLTA 64

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF-----EKVFDINV 128
           D+ K + + + ++  V +FG +DI+VNNAG+       IR  D  EF     + V ++N+
Sbjct: 65  DLRKIDGIPALLERAVAEFGHIDILVNNAGL-------IRREDAIEFSEKDWDDVMNLNI 117

Query: 129 KGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           K VF   + AA+  I Q  G  II+I S+    GG+   +YT SK  V+G+ + +A E  
Sbjct: 118 KSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWA 177

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           K+ I VN ++P  +AT        +E+R+ + +          A   G     +D+   V
Sbjct: 178 KHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRI------PAGRWG---LPSDLMGPV 228

Query: 248 LFLASDEARYISGTNLMVDGGFTS 271
           +FLAS  + YI+G  + VDGG+ +
Sbjct: 229 VFLASSASDYINGYTIAVDGGWLA 252

Length = 253

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  111 bits (280), Expect = 2e-29
 Identities = 80/254 (31%), Positives = 123/254 (48%), Gaps = 19/254 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSL-GGEPDTFFCH 72
           RL G+VAL+TGG  G+G +  R F + GA  + I       G+     L        F  
Sbjct: 3   RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQ 62

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKG 130
            D++  ED    V    E FG LD +VN AG++  G     I +     F++ F +NV+ 
Sbjct: 63  ADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGT----ILDTSPELFDRHFAVNVRA 118

Query: 131 VFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            F  M+ A ++M   + +GTI++I S++   G     AY  SK A+  L +N A  L + 
Sbjct: 119 PFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRN 178

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR-NFVARNANMQ--GTELTANDVANA 246
            IRVN ++   +AT         E+R +    G   +++ + A  Q  G  L  ++VA A
Sbjct: 179 RIRVNGLNIGWMAT-------EGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARA 231

Query: 247 VLFLASDEARYISG 260
           V FL SDE+  ++G
Sbjct: 232 VAFLLSDESGLMTG 245

Length = 260

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score =  110 bits (277), Expect = 4e-29
 Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 23/261 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L GR AL+TG + GIGE   RL H  GA V +   +    + +   LG     F    ++
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIF--PANL 61

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  ++V +           +DI+VNNAGI+      +R +D  +++ V ++N+   F   
Sbjct: 62  SDRDEVKALGQKAEADLEGVDILVNNAGITKDGL-FVRMSD-EDWDSVLEVNLTATFRLT 119

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M+ +  G II+I SV G  G  G   Y  SK  ++G +K++A E+    + VNC
Sbjct: 120 RELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNC 179

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLA 251
           V+P  +               E AM G  N   + A M    +    T  +VA+AV +LA
Sbjct: 180 VAPGFI---------------ESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLA 224

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           S EA Y++G  + V+GG   +
Sbjct: 225 SSEAAYVTGQTIHVNGGMAMI 245

Length = 245

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score =  110 bits (277), Expect = 4e-29
 Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 28/215 (13%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS------------L 62
           R  GRV L+TG   G+G +    F + GAKV + D+  +       S             
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 63  GGE--PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE- 119
           GG+   +       V   ED    V   ++ FG +DI+VNNAGI      D   A +SE 
Sbjct: 62  GGKAVANYD----SV---EDGEKIVKTAIDAFGRVDILVNNAGI----LRDRSFAKMSEE 110

Query: 120 -FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
            ++ V  +++KG F   + A   M  Q  G II+  S AG  G  G   Y+ +K  +LGL
Sbjct: 111 DWDLVMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGL 170

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
           +  +A E  KY I  N ++P A  + +    +PE+
Sbjct: 171 SNTLAIEGAKYNITCNTIAPAA-GSRMTETVMPED 204

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  109 bits (274), Expect = 1e-28
 Identities = 76/254 (29%), Positives = 118/254 (46%), Gaps = 19/254 (7%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL--GQQVCQSLGGEPDTF-FCHCDV 75
           R+AL+TGG  GIG +  +   K G +V  A+   N    +   Q  G     F     DV
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRV-AANCGPNEERAEAWLQEQGALGFDFRVVEGDV 59

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  E   +AV     + G +D++VNNAGI+       ++    ++  V D N+  VF+  
Sbjct: 60  SSFESCKAAVAKVEAELGPIDVLVNNAGITRDAT--FKKMTYEQWSAVIDTNLNSVFNVT 117

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M  +  G II+I SV G  G  G   Y+ +K  ++G  K +A E    G+ VN 
Sbjct: 118 QPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNT 177

Query: 196 VSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           +SP  +AT + +A + E+      A +                    ++A AV FLAS+E
Sbjct: 178 ISPGYIATDMVMA-MREDVLNSIVAQIPVGRLGR-----------PEEIAAAVAFLASEE 225

Query: 255 ARYISGTNLMVDGG 268
           A YI+G  L ++GG
Sbjct: 226 AGYITGATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  109 bits (274), Expect = 1e-28
 Identities = 74/269 (27%), Positives = 114/269 (42%), Gaps = 34/269 (12%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L G+ AL+TGG  GIG +TV    + GA+V              +         F   D
Sbjct: 6   ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS--------RPDDLPEGVEFVAAD 57

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +T  E   +     +E+ G +DI+V+  G S AP          E++   ++N+      
Sbjct: 58  LTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLA---- 113

Query: 135 MKHAARI-------MIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAEL 186
              A R+       MI +  G II + S+   +       AY  +K A+   +K+++ E+
Sbjct: 114 ---AVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEV 170

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ-------GTELT 239
              G+RVN VSP  + T  A+A     ER  +A        A+   M        G    
Sbjct: 171 APKGVRVNTVSPGWIETEAAVALA---ERLAEAAGTDYE-GAKQIIMDSLGGIPLGRPAE 226

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             +VA  + FLASD A  I+GT  ++DGG
Sbjct: 227 PEEVAELIAFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score =  107 bits (270), Expect = 6e-28
 Identities = 72/194 (37%), Positives = 104/194 (53%), Gaps = 7/194 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G V L+TGGA+G+G + V  F   GA+V + D +   G Q  ++  G+        D
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLD-KSAAGLQELEAAHGD-AVVGVEGD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSE-FEKVFDINVKGV 131
           V   +D   AV   V  FG +D ++ NAGI        DI +  + E F++VF INVKG 
Sbjct: 60  VRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGY 119

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              +K AA   +  ++G++I   S AG     G   YT +KHAV+GL K +A EL  Y +
Sbjct: 120 LLAVK-AALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-V 177

Query: 192 RVNCVSPYAVATGL 205
           RVN V+P  +++ L
Sbjct: 178 RVNGVAPGGMSSDL 191

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 9e-28
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 25/260 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFC-HCDVT 76
           +V +ITG + GIG +T  L  + G  VC+  +++ +  + V Q++  +         DV 
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            E DV    +    + G LD +VNNAGI  A    + + D +   ++F  NV G F   +
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAGILEAQM-RLEQMDAARLTRIFATNVVGSFLCAR 121

Query: 137 HAARIMIPQ---TKGTIISICSVAGAIGGLGPHA-YTGSKHAV----LGLNKNVAAELGK 188
            A + M  +     G I+++ S+A  +G  G +  Y  SK A+    +GL K VAAE   
Sbjct: 122 EAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAE--- 178

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            GIRVN V P  + T +  A   E  R +         V     M     TA +VA A+L
Sbjct: 179 -GIRVNAVRPGVIYTEIH-ASGGEPGRVDR--------VKAGIPMGRGG-TAEEVARAIL 227

Query: 249 FLASDEARYISGTNLMVDGG 268
           +L SDEA Y +GT + V GG
Sbjct: 228 WLLSDEASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score =  106 bits (268), Expect = 9e-28
 Identities = 74/272 (27%), Positives = 119/272 (43%), Gaps = 35/272 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT---FFCH 72
           L G+  LITG    IG + V+   + G  V  AD+      ++ +SLG E  +       
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNA----GISGAPCPDIREADLSEFEKVFDINV 128
            D+T +E +   +  + EK+G +D  VN A       G    D+   D +E      +++
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNEN---LSLHL 118

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG----------LGPHAYTGSKHAVLGL 178
              F   +  A+    Q  G +++I S+ G +              P  Y   K  ++ L
Sbjct: 119 GSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHL 178

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            K +A       IRVNCVSP     G  L + PE          F N   +  N +G  L
Sbjct: 179 TKYLAKYFKDSNIRVNCVSP-----GGILDNQPEA---------FLNAYKKCCNGKGM-L 223

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGFT 270
             +D+   ++FL SD+++YI+G N++VD GF+
Sbjct: 224 DPDDICGTLVFLLSDQSKYITGQNIIVDDGFS 255

Length = 256

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 1e-27
 Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 14/204 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L G+V ++TG A GIG    R  H  GAK+ + D+++     +   LGG+        D
Sbjct: 6   SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVAD 65

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFH 133
           VT    + +A +  VE+FG +D++V NAGI SG     + + D   F +V D+N+ GVF 
Sbjct: 66  VTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGS---VAQVDPDAFRRVIDVNLLGVF- 121

Query: 134 GMKHAARIMIPQ---TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
              H  R  +P     +G ++ + S+A      G  AY  SK  V      +  E+  +G
Sbjct: 122 ---HTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHG 178

Query: 191 IRVNCVSPYAVATGL---ALAHLP 211
           + V       + T L   A A LP
Sbjct: 179 VTVGSAYLSWIDTDLVRDADADLP 202

Length = 296

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score =  106 bits (265), Expect = 2e-27
 Identities = 76/250 (30%), Positives = 112/250 (44%), Gaps = 25/250 (10%)

Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQ--QVCQSLGGEPDTF 69
           ++R  GRVAL+TG + GIG +  R   +HG KV   A   D +      CQS G  P  F
Sbjct: 1   MERWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGY-PTLF 59

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
              CD++ EE + S       +   +D+ +NNAG+   P P +       ++++FD+NV 
Sbjct: 60  PYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGL-ARPEP-LLSGKTEGWKEMFDVNVL 117

Query: 130 GVFHGMKHAARIMIPQ--TKGTIISICSVAGAIGGLGP--HAYTGSKHAVLGLNKNVAAE 185
            +    + A + M  +    G II+I S++G         H Y  +KHAV  L + +  E
Sbjct: 118 ALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQE 177

Query: 186 L--GKYGIRVNCVSPYAVATGLALA-HLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
           L   K  IR   +SP  V T  A   H  + E+                      L   D
Sbjct: 178 LREAKTHIRATSISPGLVETEFAFKLHDNDPEKAAATYESIP------------CLKPED 225

Query: 243 VANAVLFLAS 252
           VANAVL++ S
Sbjct: 226 VANAVLYVLS 235

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  106 bits (265), Expect = 4e-27
 Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 32/280 (11%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ---SLGGEPDTFF 70
             L  +VA+ITGG   +G +  R   + GAKV         G +V +   +LGG      
Sbjct: 1   FSLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGG--RAIA 58

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG------------ISGAPCPDIREADLS 118
              DV     +  A +  V +FGT+DI++N AG                   +  + D  
Sbjct: 59  LAADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEE 118

Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
            +E VFD+N+ G F   +   + M+ Q  G+II+I S+          AY+ +K AV   
Sbjct: 119 GWEFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNF 178

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-NANMQGTE 237
            + +A E    G+RVN ++P    T      L   + +         +  R N  +  T 
Sbjct: 179 TQWLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGS---------YTDRSNKILGRTP 229

Query: 238 LT----ANDVANAVLFLASDEA-RYISGTNLMVDGGFTSV 272
           +       ++  A+LFLAS++A  +++G  + VDGGF++ 
Sbjct: 230 MGRFGKPEELLGALLFLASEKASSFVTGVVIPVDGGFSAY 269

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  104 bits (262), Expect = 1e-26
 Identities = 81/287 (28%), Positives = 125/287 (43%), Gaps = 41/287 (14%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPD 67
           P +  L G+VA+ITGG   +G +  +   + GAKV I D      + V   +   GGE  
Sbjct: 3   PNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGE-- 60

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG-------------ISGAPCPDIRE 114
                 DV  +E +  A    +E FG  DI++N AG                 P     +
Sbjct: 61  ALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFD 120

Query: 115 ADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA 174
            D   FE VFD+N+ G     +  A+ M+ +  G II+I S+          AY+ +K A
Sbjct: 121 LDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAA 180

Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER----TEDAMVGFRNFVAR- 229
           +    + +A    K GIRVN     A+A G  L    E+ R     ED      +   R 
Sbjct: 181 ISNFTQWLAVHFAKVGIRVN-----AIAPGFFLT---EQNRALLFNEDG-----SLTERA 227

Query: 230 NANMQGTEL----TANDVANAVLFLASDEA-RYISGTNLMVDGGFTS 271
           N  +  T +       ++   +L+LA ++A  +++G  L VDGGF++
Sbjct: 228 NKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSA 274

Length = 278

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 2e-26
 Identities = 83/256 (32%), Positives = 118/256 (46%), Gaps = 17/256 (6%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC--HCDVT 76
           +V LITG + GIG +T  L    G  V I   +D    +             C    DV 
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            E DV +  D     FG LD +VNNAGI  AP   + + D +   ++FD NV G +   +
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAGIV-APSMPLADMDAARLRRMFDTNVLGAYLCAR 121

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLG-PHAY---TGSKHAVLGLNKNVAAELGKYGIR 192
            AAR +     G   +I +V+     LG P+ Y    GSK AV  L   +A ELG +G+R
Sbjct: 122 EAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVR 181

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN V P  + T +   H    +    A +G +  + R          A++VA  +++L S
Sbjct: 182 VNAVRPGLIETEI---HASGGQPGRAARLGAQTPLGRAG-------EADEVAETIVWLLS 231

Query: 253 DEARYISGTNLMVDGG 268
           D A Y++G  L V GG
Sbjct: 232 DAASYVTGALLDVGGG 247

Length = 248

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  102 bits (257), Expect = 2e-26
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 5/191 (2%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           +VAL+TG + GIG    R   + G +V +        + +        D      D    
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRN---PEDLAALSASGGDVEAVPYDARDP 57

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           ED  + VD   ++FG +D++V+NAGI       +RE   +E E  F INV       +  
Sbjct: 58  EDARALVDALRDRFGRIDVLVHNAGIGRPT--TLREGSDAELEAHFSINVIAPAELTRAL 115

Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSP 198
              +     G ++ + S++G     G   Y+ SK A+  L   +  E   +G+RV+ V P
Sbjct: 116 LPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCP 175

Query: 199 YAVATGLALAH 209
             V T +A   
Sbjct: 176 GFVDTPMAQGL 186

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score =  103 bits (260), Expect = 3e-26
 Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 23/211 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVC--QSLGGEPDTFF 70
           +   G+VA+ITG A+G G +  R+    G K+ +ADVQ D L + V   ++ G E     
Sbjct: 2   KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGV- 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVK 129
              DV+    V +  D  +E+FG + ++ NNAG+ +G     + E  L+++E V  +N+ 
Sbjct: 61  -RTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGL---VWENSLADWEWVLGVNLW 116

Query: 130 GVFHGMKHAARIMI------PQTKGTIISICSVAGAIGGLGPHA---YTGSKHAVLGLNK 180
           GV HG++    +M+      P  +G I++  S+A   G L P A   Y  SKHAV+ L +
Sbjct: 117 GVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMA---GLLAPPAMGIYNVSKHAVVSLTE 173

Query: 181 NVAAELGKYGIRVNC--VSPYAVATGLALAH 209
            +  +L     +V    + PY V TG+  + 
Sbjct: 174 TLYQDLSLVTDQVGASVLCPYFVPTGIWQSE 204

Length = 287

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  102 bits (255), Expect = 5e-26
 Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 34/267 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF-FCH-- 72
           + G++ L+TGG+ GIG    + F + GA+V I+  +     + C     E   +  C   
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARK----AEACADAAEELSAYGECIAI 59

Query: 73  -CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKG 130
             D++ EE + + V    E+   LD++VNNAG + GAP     E+    ++KV DINVK 
Sbjct: 60  PADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESG---WDKVMDINVKS 116

Query: 131 VFHGMKHAARIMIPQTK--------GTIISICSVAGAIG-GLGPHAYTGSKHAVLGLNKN 181
           VF       + ++P  +          +I+I S+AG +  GL  ++Y  SK AV  L + 
Sbjct: 117 VF----FLTQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRK 172

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           +A EL    I VN ++P    + +  A L  +    +A         ++  + G      
Sbjct: 173 LAKELAGEHITVNAIAPGRFPSKM-TAFLLNDPAALEA-------EEKSIPL-GRWGRPE 223

Query: 242 DVANAVLFLASDEARYISGTNLMVDGG 268
           D+A   + LAS    Y++G  + VDGG
Sbjct: 224 DMAGLAIMLASRAGAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score =  101 bits (254), Expect = 6e-26
 Identities = 77/255 (30%), Positives = 111/255 (43%), Gaps = 28/255 (10%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+  L+ GG+ GIG + VR F   GA V          +   + L  E        D   
Sbjct: 6   GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGS---KDAAERLAQETGATAVQTDSAD 62

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            + V   V     K G LDI+V NAGI  A   D  E D  + +++F IN+   +H    
Sbjct: 63  RDAVIDVVR----KSGALDILVVNAGI--AVFGDALELDADDIDRLFKINIHAPYHASVE 116

Query: 138 AARIMIPQTKGTIISICSVAG---AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           AAR M     G II I SV G    + G+   AY  SK A+ G+ + +A + G  GI +N
Sbjct: 117 AARQMPE--GGRIIIIGSVNGDRMPVAGMA--AYAASKSALQGMARGLARDFGPRGITIN 172

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V P  + T    A+ P ++     M      + R+           +VA  V +LA  E
Sbjct: 173 VVQPGPIDTDANPANGPMKDMMHSFMA-----IKRHG-------RPEEVAGMVAWLAGPE 220

Query: 255 ARYISGTNLMVDGGF 269
           A +++G    +DG F
Sbjct: 221 ASFVTGAMHTIDGAF 235

Length = 237

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score =  102 bits (255), Expect = 7e-26
 Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 27/266 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGEPDTFFCHCD 74
           L G+VAL+TG ++G+G    ++  + GAKV +A  + + L +   +             D
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAP-CPDIREADLSEFEKVFDINVKGVFH 133
           VT  + + +AV     + GT+DI+VNN+G+S      D+  AD   F+ VFD N +G F 
Sbjct: 67  VTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPAD---FDFVFDTNTRGAFF 123

Query: 134 GMKHAARIMI--------PQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVA 183
             +  A+ MI         +  G II+I SVAG   +  +G   Y  SK AV+ + + +A
Sbjct: 124 VAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG--LYCMSKAAVVHMTRAMA 181

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            E G++GI VN + P  + T +   H   E+  +   +  R  V +            D+
Sbjct: 182 LEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGK----------PEDL 231

Query: 244 ANAVLFLASDEARYISGTNLMVDGGF 269
              +L LA+DE+++I+G  +  D GF
Sbjct: 232 DGLLLLLAADESQFINGAIISADDGF 257

Length = 258

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score =  101 bits (254), Expect = 9e-26
 Identities = 80/253 (31%), Positives = 114/253 (45%), Gaps = 14/253 (5%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           GRVAL+TG A GIG          G +V +AD+    G +V ++LG   + +F   DV  
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG--ENAWFIAMDVAD 67

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E  V + V   + +FG LD +V NA I+      +    L+ + +V  +N+ G     KH
Sbjct: 68  EAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKH 127

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
            A  +     G I+++ S           AY  SK  +L L   +A  LG   IRVN VS
Sbjct: 128 CAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVNAVS 185

Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY 257
           P     G   A  P + R E       +     A   G   T  DVA  V +L S +A +
Sbjct: 186 P-----GWIDARDPSQRRAEPLSE--ADHAQHPAGRVG---TVEDVAAMVAWLLSRQAGF 235

Query: 258 ISGTNLMVDGGFT 270
           ++G   +VDGG T
Sbjct: 236 VTGQEFVVDGGMT 248

Length = 255

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 1e-25
 Identities = 66/207 (31%), Positives = 96/207 (46%), Gaps = 14/207 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLGQQVC--QSLGGEPDTFFCHCD 74
            +V +ITG + G+G +T R F + GAKV  +A  ++ L       ++ GGE        D
Sbjct: 8   RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEA--LAVVAD 65

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           V   E V +A D   E+ G +D  VNNA ++   P  D+      EF +V ++   GV H
Sbjct: 66  VADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPE---EFRRVTEVTYLGVVH 122

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL--GKYGI 191
           G   A R M P+ +G II + S           AY  +KHA+ G   ++  EL      +
Sbjct: 123 GTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPV 182

Query: 192 RVNCVSPYAVAT---GLALAHLPEEER 215
            V  V P AV T     A + LP E +
Sbjct: 183 SVTMVQPPAVNTPQFDWARSRLPVEPQ 209

Length = 334

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  101 bits (252), Expect = 2e-25
 Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 7/257 (2%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH-C 73
           R  G+V ++TG A GIG          GA+V + D +  L  +V   +    D    H  
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVD-RSELVHEVLAEILAAGDAAHVHTA 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D+         V   VE+FG +D+++NN G            +  + E     ++     
Sbjct: 60  DLETYAGAQGVVRAAVERFGRVDVLINNVG-GTIWAKPYEHYEEEQIEAEIRRSLFPTLW 118

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +     M+ + +G I+++ S+A    G+    Y+ +K  V  L  ++A E  + GIRV
Sbjct: 119 CCRAVLPHMLERQQGVIVNVSSIA--TRGIYRIPYSAAKGGVNALTASLAFEHARDGIRV 176

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV--ARNANMQGTELTANDVANAVLFLA 251
           N V+P                 +E   V ++  V    ++++ G   T ++   A+LFLA
Sbjct: 177 NAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAILFLA 236

Query: 252 SDEARYISGTNLMVDGG 268
           SDEA YI+GT L V GG
Sbjct: 237 SDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  100 bits (252), Expect = 2e-25
 Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 15/260 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLG--QQVCQSLGGEPDTFFCH 72
           L G+V +++G   G+G +      + GA V + A   + L         LG         
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGR--RALAVP 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D+T E+   + V L +E+FG +D +VNNA         + +AD + +  V ++NV G  
Sbjct: 61  TDITDEDQCANLVALALERFGRVDALVNNAFRVP-SMKPLADADFAHWRAVIELNVLGTL 119

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +  A    + ++ G+I+ I S+          AY  +K A+L  ++++A ELG  GIR
Sbjct: 120 R-LTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIR 178

Query: 193 VNCVSP---YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVL 248
           VN V+P   +         H   +       +    +    AN     L T ++VA+AVL
Sbjct: 179 VNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQI----YAETAANSDLKRLPTDDEVASAVL 234

Query: 249 FLASDEARYISGTNLMVDGG 268
           FLASD AR I+G  L V+ G
Sbjct: 235 FLASDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score =  100 bits (250), Expect = 3e-25
 Identities = 68/280 (24%), Positives = 108/280 (38%), Gaps = 63/280 (22%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
           +ITG A+GIG +T  L    G  V   D+++                     D++  E  
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLREA----------------DVIADLSTPEGR 46

Query: 82  CSAV-DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
            +A+ D+     G LD +VN AG+ G     +          V  +N  G+   M+    
Sbjct: 47  AAAIADVLARCSGVLDGLVNCAGVGGTTVAGL----------VLKVNYFGLRALMEALLP 96

Query: 141 IMIPQTKGTIISICSVAGAIGG-----------------------LGPH----AYTGSKH 173
            +        + + S+AGA                                  AY GSK 
Sbjct: 97  RLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSKE 156

Query: 174 AV-LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
           A+ +   +  A  L   G+RVN V+P  V T + L    ++ R  +++  F   + R A 
Sbjct: 157 ALTVWTRRRAATWLYGAGVRVNTVAPGPVETPI-LQAFLQDPRGGESVDAFVTPMGRRA- 214

Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
                   +++A  + FLASD A +I+G NL VDGG  + 
Sbjct: 215 ------EPDEIAPVIAFLASDAASWINGANLFVDGGLDAS 248

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 99.1 bits (247), Expect = 9e-25
 Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 18/257 (7%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC-- 73
           L G+  LITG A GIG        ++GA++ I D+     +     L  E      H   
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAP 64

Query: 74  -DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGV 131
            +VT +++V +A++   +  G +D+++NNAGI    P  +  E +   +  V  +N   V
Sbjct: 65  FNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQE---WNDVIAVNQTAV 121

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F   +  AR M+ +  G II+ICS+   +G      Y  SK AV  L + +  EL ++ I
Sbjct: 122 FLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNI 181

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           +VN ++P    T +  A + +E  T  A +  R   AR  + Q  EL       A +FL+
Sbjct: 182 QVNGIAPGYFKTEMTKALVEDEAFT--AWLCKRTPAARWGDPQ--ELIG-----AAVFLS 232

Query: 252 SDEARYISGTNLMVDGG 268
           S  + +++G  L VDGG
Sbjct: 233 SKASDFVNGHLLFVDGG 249

Length = 254

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 98.7 bits (246), Expect = 2e-24
 Identities = 67/262 (25%), Positives = 107/262 (40%), Gaps = 24/262 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQD----NLGQQVCQSLGGEPDTFFCHCD 74
            VA++TG + GIG +        G  + I D+ D            + G     F    D
Sbjct: 2   PVAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYF--QAD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           + +  D  + +D   E FG LD +VNNAGI+  P  D+ +     F+++  IN++G F  
Sbjct: 60  IGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFL 119

Query: 135 MKHAARIMIPQTK------GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            +  AR M+ Q         +II + S+   +       Y  SK  +    + +A  L  
Sbjct: 120 TQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLAD 179

Query: 189 YGIRVNCVSPYAVATGLALAHLPE-EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
            GI V+ + P  + T +      + +E     +V  R    R            D+A AV
Sbjct: 180 EGIAVHEIRPGLIHTDMTAPVKEKYDELIAAGLVPIR----RWGQ-------PEDIAKAV 228

Query: 248 LFLASDEARYISGTNLMVDGGF 269
             LAS    Y +G  + +DGG 
Sbjct: 229 RTLASGLLPYSTGQPINIDGGL 250

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 98.3 bits (245), Expect = 2e-24
 Identities = 72/264 (27%), Positives = 115/264 (43%), Gaps = 34/264 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI------ADVQDNLGQQVCQSLGGEPDTF 69
           L  +V ++TG   GIG +      K G+ V +       ++ + L  ++ +  GGE    
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETL--KMVKENGGE--GI 59

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               DV+  E   +    T++++G  DI+VNNAG+ G   P +   D    +K    + K
Sbjct: 60  GVLADVSTREGCETLAKATIDRYGVADILVNNAGL-GLFSPFL-NVDDKLIDKHISTDFK 117

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            V +  +  A+ M  +  G I++I SVAG     G   Y   K AV+ L K +A EL   
Sbjct: 118 SVIYCSQELAKEM--REGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAPK 175

Query: 190 GIRVNCVSPYAVATGLA-----LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
            IRVN ++P  V T L      +  + E+E             A    + G  L   +VA
Sbjct: 176 -IRVNAIAPGFVKTKLGESLFKVLGMSEKE------------FAEKFTLMGKILDPEEVA 222

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
             V  +   E+  I+G   ++D G
Sbjct: 223 EFVAAILKIES--ITGQVFVLDSG 244

Length = 252

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 98.0 bits (245), Expect = 2e-24
 Identities = 64/209 (30%), Positives = 93/209 (44%), Gaps = 31/209 (14%)

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR------EADLSEFEKVFDI 126
            DVT +ED+    +   E  G +D +V++  +S    P+IR      +     F K  DI
Sbjct: 51  LDVTSDEDIDELFEKVKEDGGKIDFLVHSIAMS----PEIRKGKPYLDTSREGFLKALDI 106

Query: 127 NVKGVFHGM-KHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVA 183
           +    F  + K A  +M     G+I+++  +A      G G      +K A+  L + +A
Sbjct: 107 SAYS-FISLAKAAKPLMNE--GGSIVALSYIAAERVFPGYG--GMGVAKAALESLARYLA 161

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTAN 241
            ELG+ GIRVN +S     T                + GF   V     M   G   +A 
Sbjct: 162 YELGRKGIRVNTISAGPTKT-----------TAGSGIGGFDKMVEYAEEMAPLGRNASAE 210

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFT 270
           +VANA  FL SD AR I+G  L VDGGF+
Sbjct: 211 EVANAAAFLLSDLARGITGQILYVDGGFS 239

Length = 239

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 97.7 bits (244), Expect = 3e-24
 Identities = 83/272 (30%), Positives = 116/272 (42%), Gaps = 54/272 (19%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCH 72
            +VALITGGA  IG +  R  H  G +V I     A   D L  ++       P +    
Sbjct: 6   AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNA---LRPGSAAAL 62

Query: 73  CDVTKEEDVCSA-VDLTVEKFGTLDIMVNNAGISGAPCP--DIREADLSEFEKVFDINVK 129
                + D     V   V  FG LD +VNNA  S  P P   I EA   +   +F  N+K
Sbjct: 63  QADLLDPDALPELVAACVAAFGRLDALVNNAS-SFYPTPLGSITEAQWDD---LFASNLK 118

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA---------YTGSKHAVLGLNK 180
             F  +  AA   + + +G I++I  +         HA         Y  +K A+  L +
Sbjct: 119 APFF-LSQAAAPQLRKQRGAIVNITDI---------HAERPLKGYPVYCAAKAALEMLTR 168

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-- 238
           ++A EL    +RVN V+P A+         PE+  + D         AR A +  T L  
Sbjct: 169 SLALELAP-EVRVNAVAPGAIL-------WPEDGNSFDE-------EARQAILARTPLKR 213

Query: 239 --TANDVANAVLFLASDEARYISGTNLMVDGG 268
             T  D+A AV FL   +A +I+G  L VDGG
Sbjct: 214 IGTPEDIAEAVRFLL-ADASFITGQILAVDGG 244

Length = 249

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 98.2 bits (245), Expect = 3e-24
 Identities = 86/281 (30%), Positives = 127/281 (45%), Gaps = 52/281 (18%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL---------GQQVCQ---SLGGE 65
           GRV ++TG   GIG +    F   GA+V + D+   L          Q V     + GGE
Sbjct: 6   GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGE 65

Query: 66  P--DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FE 121
              +      D+   +   + VD  VE FG LD++VNNAGI      D   A++SE  ++
Sbjct: 66  AVANG----DDIADWDGAANLVDAAVETFGGLDVLVNNAGI----LRDRMIANMSEEEWD 117

Query: 122 KVFDINVKGVFHGMKHAARIMIPQTK------GTIISICSVAGAIGGLGPHAYTGSKHAV 175
            V  +++KG F  ++HAA     ++K        II+  S AG  G +G   Y+ +K  +
Sbjct: 118 AVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGI 177

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYA----VATGLALAHLPEEERTEDAMVGFRNFVARNA 231
             L    AAELG+YG+ VN ++P A      T  A      EE   DAM           
Sbjct: 178 AALTLVAAAELGRYGVTVNAIAPAARTRMTETVFAEMMAKPEEGEFDAM----------- 226

Query: 232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
                     +V+  V++L S E+R ++G    V+GG  SV
Sbjct: 227 -------APENVSPLVVWLGSAESRDVTGKVFEVEGGKISV 260

Length = 286

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 97.7 bits (244), Expect = 4e-24
 Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 21/193 (10%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           +VAL+TG ++GIG +T     + G +V     ++             P       DVT +
Sbjct: 5   KVALVTGASSGIGRATAEKLARAGYRV-FGTSRNPARAA------PIPGVELLELDVTDD 57

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             V +AVD  + + G +D++VNNAG+   GA      E+ +++ + +FD NV G+    +
Sbjct: 58  ASVQAAVDEVIARAGRIDVLVNNAGVGLAGA----AEESSIAQAQALFDTNVFGILRMTR 113

Query: 137 HAARIMIPQTKGTIISICSVAGAI----GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
                M  Q  G II+I SV G +      L    Y  SKHAV G ++++  E+ ++GIR
Sbjct: 114 AVLPHMRAQGSGRIINISSVLGFLPAPYMAL----YAASKHAVEGYSESLDHEVRQFGIR 169

Query: 193 VNCVSPYAVATGL 205
           V+ V P    T  
Sbjct: 170 VSLVEPAYTKTNF 182

Length = 270

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 97.3 bits (243), Expect = 5e-24
 Identities = 79/263 (30%), Positives = 120/263 (45%), Gaps = 28/263 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGGEPDTFFCHC 73
              G+  ++ GG +GI     + F + GA V +A   Q+ +   V Q     P+      
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSA 65

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA----PCPDIREADLSE--FEKVFDIN 127
           DV     V +A     ++FG +D++V     SGA    P P    A +S   F+ V DI+
Sbjct: 66  DVRDYAAVEAAFAQIADEFGPIDVLV-----SGAAGNFPAP---AAGMSANGFKTVVDID 117

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           + G F+ +K A  ++  +   +II I +    +          +K  V  L + +A E G
Sbjct: 118 LLGTFNVLKAAYPLL-RRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWG 176

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVAN 245
             GIRVN + P  +A    +A L      + A       VA++  ++  GT     D+AN
Sbjct: 177 PEGIRVNSIVPGPIAGTEGMARLAPSPELQAA-------VAQSVPLKRNGT---KQDIAN 226

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
           A LFLASD A YI+G  L VDGG
Sbjct: 227 AALFLASDMASYITGVVLPVDGG 249

Length = 264

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 96.8 bits (241), Expect = 7e-24
 Identities = 82/258 (31%), Positives = 116/258 (44%), Gaps = 15/258 (5%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDV 75
            VAL+TG  +GIG +  R   K G +V + A  ++ L   V   +  G E D     CDV
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADG--RTCDV 61

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
               ++ + V   V ++G +D++VNNAG SG       E     +  V + N+ GVF   
Sbjct: 62  RSVPEIEALVAAAVARYGPIDVLVNNAGRSGGG--ATAELADELWLDVVETNLTGVFRVT 119

Query: 136 KH--AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           K    A  M+ +  G II+I S  G  G +    Y+ SKH V+G  K +  EL + GI V
Sbjct: 120 KEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 179

Query: 194 NCVSPYAVATGLAL---AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           N V P  V T +A     H  +          F    AR     G  +T  +VA  V +L
Sbjct: 180 NAVCPGFVETPMAASVREHYADIWEVSTEEA-FDRITARVP--LGRYVTPEEVAGMVAYL 236

Query: 251 ASDEARYISGTNLMVDGG 268
             D A  ++   L V GG
Sbjct: 237 IGDGAAAVTAQALNVCGG 254

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 96.0 bits (239), Expect = 1e-23
 Identities = 76/266 (28%), Positives = 112/266 (42%), Gaps = 24/266 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGGEPDTFFCHC 73
           RL  +VA++TG   G+G +    F + GA V IA   +  L +   Q             
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAA 66

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVF 132
           D+   E         VE FG LDI+VNN G +   P       DL++    F  NV    
Sbjct: 67  DLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLAD---AFTFNVATAH 123

Query: 133 HGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
                A  +M+  +  G++I+I S  G + G G  AY  +K A+    +  A +L    I
Sbjct: 124 ALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCPR-I 182

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAV 247
           RVN ++P ++ T  AL  +   +     M             + T L       D+A A 
Sbjct: 183 RVNAIAPGSILTS-ALEVVAANDELRAPME------------KATPLRRLGDPEDIAAAA 229

Query: 248 LFLASDEARYISGTNLMVDGGFTSVN 273
           ++LAS    Y++G  L VDGG T  N
Sbjct: 230 VYLASPAGSYLTGKTLEVDGGLTFPN 255

Length = 263

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 95.4 bits (238), Expect = 2e-23
 Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 11/192 (5%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLG--QQVCQSLGGEPDTFFCHCDV 75
             ALITG ++GIG++T   F K G  +  +A  QD L       +S G +   +    D+
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAY--SIDL 64

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  E +   +   +E+FG  D+++NNAG+  A    + E  LS+++ V  +N+  VF   
Sbjct: 65  SNPEAIAPGIAELLEQFGCPDVLINNAGM--AYTGPLLEMPLSDWQWVIQLNLTSVFQCC 122

Query: 136 KHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
                 M  +  G II++ S+A   A    G  AY  SK A+    K +A E   +GIRV
Sbjct: 123 SAVLPGMRARGGGLIINVSSIAARNAFPQWG--AYCVSKAALAAFTKCLAEEERSHGIRV 180

Query: 194 NCVSPYAVATGL 205
             ++  AV T L
Sbjct: 181 CTITLGAVNTPL 192

Length = 241

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 95.2 bits (237), Expect = 2e-23
 Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 14/190 (7%)

Query: 23  ITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC---DVTKEE 79
           ITG A+GIG  T  LF ++G  V + D+ ++    +   LG E           DVT   
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAEN----VVAGALDVTDRA 60

Query: 80  DVCSAV-DLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
              +A+ D      G LD + NNAG+  G P  D+  A     +++ DINVKGV +G  +
Sbjct: 61  AWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAH---DRMVDINVKGVLNGA-Y 116

Query: 138 AARIMIPQTKGT-IISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
           AA   +  T G  +I+  S +   G      Y+ +K AV GL + +  E  ++GIRV  V
Sbjct: 117 AALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADV 176

Query: 197 SPYAVATGLA 206
            P+ V T + 
Sbjct: 177 WPWFVDTPIL 186

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 96.0 bits (239), Expect = 2e-23
 Identities = 85/265 (32%), Positives = 118/265 (44%), Gaps = 18/265 (6%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQ--SLGGEPDTFFCH 72
              R  L+TGG +GIG+         GA V I     D L     +  +L G     +  
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT E+ V  AVD      G L  +V+ AG S    P I + D   + +  D+NV G  
Sbjct: 65  ADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGP-ITQIDSDAWRRTVDLNVNGTM 123

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           + +KHAAR ++    G+ + I S+A +       AY  +K AV  L K  A ELG   +R
Sbjct: 124 YVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVR 183

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN + P  + T L        E + D       + A     +  E+   DVAN  +FL S
Sbjct: 184 VNSIRPGLIRTDLVAPITESPELSAD-------YRACTPLPRVGEVE--DVANLAMFLLS 234

Query: 253 DEARYISGTNLMVDGGFTSVNHSLR 277
           D A +I+G  + VDGG     H LR
Sbjct: 235 DAASWITGQVINVDGG-----HMLR 254

Length = 276

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 95.1 bits (237), Expect = 2e-23
 Identities = 66/192 (34%), Positives = 94/192 (48%), Gaps = 13/192 (6%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQV--CQSLGGEPDTFFCHCDV 75
           +V +ITG ++GIG +T   F + GAK V  A   + L +     + LGGE        DV
Sbjct: 1   QVVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGE--AIAVVADV 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKGVFH 133
                V  A D  VE+FG +D  VNNAG++  G       +    EF +VFD+N  G  +
Sbjct: 59  ADAAQVERAADTAVERFGRIDTWVNNAGVAVFGR----FEDVTPEEFRRVFDVNYLGHVY 114

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG--I 191
           G   A   +  +  G +I++ S+ G        AY+ SKHAV G  +++ AEL   G  I
Sbjct: 115 GTLAALPHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPI 174

Query: 192 RVNCVSPYAVAT 203
            V  V P A+ T
Sbjct: 175 SVTLVQPTAMNT 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 94.7 bits (236), Expect = 3e-23
 Identities = 68/259 (26%), Positives = 105/259 (40%), Gaps = 34/259 (13%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI------ADVQDNLGQQVCQSLGGEPDTFFCH 72
            VAL+TG A  IG +        G +V +      A+ Q    +    +L          
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQR--LKDELNALRNS--AVLVQ 56

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++        V      FG  D++VNNA         + +     + ++F IN+K  +
Sbjct: 57  ADLSDFAACADLVAAAFRAFGRCDVLVNNASAFYP--TPLGQGSEDAWAELFGINLKAPY 114

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGI 191
             ++  AR +     G+II+I   A     L  + AY  SK A+ GL ++ A EL    I
Sbjct: 115 LLIQAFARRLAGSRNGSIINII-DAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPN-I 172

Query: 192 RVNCVSPYAVATGLAL--AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           RVN ++P     GL L    +  E R            A          +A ++A+AV+F
Sbjct: 173 RVNGIAP-----GLILLPEDMDAEYREN----------ALRKVPLKRRPSAEEIADAVIF 217

Query: 250 LASDEARYISGTNLMVDGG 268
           L      YI+G  + VDGG
Sbjct: 218 LLDS--NYITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 94.4 bits (235), Expect = 3e-23
 Identities = 79/255 (30%), Positives = 117/255 (45%), Gaps = 32/255 (12%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVC-IA-DVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           R  L+TG   GIG +        G +V  IA    D+            P   F  CD+ 
Sbjct: 4   RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF-----------PGELFA-CDLA 51

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             E   + +    E    +D +VNN GI+  P P + + DL+  + V+D+NV+      +
Sbjct: 52  DIEQTAATLAQINEIHP-VDAIVNNVGIA-LPQP-LGKIDLAALQDVYDLNVRAAVQVTQ 108

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
                M  + +G I++ICS A   G L   +Y+ +K A++G  +  A EL +YGI VN V
Sbjct: 109 AFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAV 167

Query: 197 SPYAVATGLALAHLP---EEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           +P  + T L     P   EEE+   A +  R              T  +VA A+ FL SD
Sbjct: 168 APGPIETELFRQTRPVGSEEEKRVLASIPMRRLG-----------TPEEVAAAIAFLLSD 216

Query: 254 EARYISGTNLMVDGG 268
           +A +I+G  L VDGG
Sbjct: 217 DAGFITGQVLGVDGG 231

Length = 234

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 94.0 bits (234), Expect = 8e-23
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 29/262 (11%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQ--QVCQSLGGEPDTFFCHCD 74
            +V +ITGG++G+G++  + F + GA V I    ++ L +     +   G+  T     D
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTV--QMD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVF 132
           V   EDV   V+   EKFG +D ++NNA      CP     DLS   +  V DI + G F
Sbjct: 59  VRNPEDVQKMVEQIDEKFGRIDALINNAA-GNFICP---AEDLSVNGWNSVIDIVLNGTF 114

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG-KYG 190
           +  +   +  I +  KG II++ +      G G      +K  VL + + +A E G KYG
Sbjct: 115 YCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYG 174

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANA 246
           IRVN ++P  +            ERT  A   + +  A    +Q   L    T  ++A  
Sbjct: 175 IRVNAIAPGPI------------ERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGL 222

Query: 247 VLFLASDEARYISGTNLMVDGG 268
             FL SDEA YI+GT + +DGG
Sbjct: 223 AYFLLSDEAAYINGTCITMDGG 244

Length = 252

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 93.9 bits (234), Expect = 8e-23
 Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 27/268 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           QR  G+V ++TG A GIG          GA+V + D  + + +   +      +      
Sbjct: 4   QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTA 63

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK---VFDINVKG 130
           D+       +A+   VE FG +D+++NN G  G     I      E+E+     +I  + 
Sbjct: 64  DLETYAGAQAAMAAAVEAFGRIDVLINNVG--GT----IWAKPFEEYEEEQIEAEIR-RS 116

Query: 131 VFHG--MKHAA-RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           +F       A    M+ Q  G I+++ S+A    G+    Y+ +K  V  L  ++A E  
Sbjct: 117 LFPTLWCCRAVLPHMLAQGGGAIVNVSSIA--TRGINRVPYSAAKGGVNALTASLAFEYA 174

Query: 188 KYGIRVNCVSPYAVATGLALA---HLP--EEERTEDAMVGFRNFVAR--NANMQGTELTA 240
           ++GIRVN     AVA G   A    +P     ++E     ++  V +  ++++     T 
Sbjct: 175 EHGIRVN-----AVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTI 229

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
           ++   A+LFLASDEA YI+GT L V GG
Sbjct: 230 DEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 93.9 bits (234), Expect = 8e-23
 Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 24/263 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG----QQVCQSLGGEPDTFFCHCD 74
            VAL+TGG  GIG    R     G  + I D  D+      QQ  ++LG E    F   D
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE--VIFFPAD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V       + +D     +G +D +VNNAG+      D+ +     F++V  IN++G F  
Sbjct: 61  VADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFL 120

Query: 135 MKHAARIMIPQTK------GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            +  A+ M+ Q +       +I+ + SV   +       Y  SK  +    +  AA L +
Sbjct: 121 TQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAE 180

Query: 189 YGIRVNCVSPYAVATGL-ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
            GI V  V P  + T + A      +      +V    +        G      DVA AV
Sbjct: 181 EGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRW--------G---EPEDVARAV 229

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
             LAS +  Y +G  + VDGG +
Sbjct: 230 AALASGDLPYSTGQAIHVDGGLS 252

Length = 256

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 90.3 bits (225), Expect = 2e-22
 Identities = 39/172 (22%), Positives = 63/172 (36%), Gaps = 10/172 (5%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKV---CIADVQDNLGQQVCQSLGGE-PDTFFCHCD 74
              LITGG  G+G +  R     GA+               ++   L     +     CD
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V   + + + +       G LD +V+NAG+       + E     FE+V    V G ++ 
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLDDG--PLEELTPERFERVLAPKVTGAWNL 118

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
            +           G  +   SVAG +G  G   Y  +  A+  L ++  AE 
Sbjct: 119 HELTR----DLDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 92.4 bits (230), Expect = 3e-22
 Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 36/273 (13%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDT--FFCH 72
           L GRVA++TGG++GIG +TV L  + GA V I    ++ L     +     P        
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG----APCPDIREADLSEFE-KVFDIN 127
           CDV  E DV +       +FG +D++VNNAG       A   D  +A   E E K F   
Sbjct: 66  CDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTD--DAWRDELELKYF--- 120

Query: 128 VKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLG----PH--AYTGSKHAVLGLNK 180
              V +    A   ++  +   +I+ + S+      L     PH  A + ++  +L L K
Sbjct: 121 --SVIN-PTRAFLPLLRASAAASIVCVNSL------LALQPEPHMVATSAARAGLLNLVK 171

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-- 238
           ++A EL   G+RVN +    V +G        E R  D    +  + A  A  +G  L  
Sbjct: 172 SLATELAPKGVRVNSILLGLVESGQWRRRY--EAR-ADPGQSWEAWTAALARKKGIPLGR 228

Query: 239 --TANDVANAVLFLASDEARYISGTNLMVDGGF 269
               ++ A A+ FLAS  + Y +G+++ V GGF
Sbjct: 229 LGRPDEAARALFFLASPLSSYTTGSHIDVSGGF 261

Length = 265

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 92.1 bits (229), Expect = 3e-22
 Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 19/198 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA---------DVQDNLGQQV------CQ 60
           L G+VA +TG + GIG +      K GA V +A             +L   +       +
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           + GG+        DV  E+ V + V+ TV++FG LDI+VNNAG        + +     F
Sbjct: 61  AAGGQ--ALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGA--IWLSLVEDTPAKRF 116

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           + +  +N++G +   + A   M+   +G I++I          G  AY   K  +  L  
Sbjct: 117 DLMQRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTL 176

Query: 181 NVAAELGKYGIRVNCVSP 198
            +AAEL ++GI VN + P
Sbjct: 177 GLAAELRRHGIAVNSLWP 194

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 90.7 bits (226), Expect = 9e-22
 Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 56/280 (20%)

Query: 18  GRVALITGGAT--GIGESTVRLFHKHGAKVCI---ADVQDNLGQQVCQSLGGEPDTFFCH 72
           G+  LITG A    I     +  H+ GA++      +      +++ + LG         
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVL--P 58

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR------EADLSEFEKVFDI 126
           CDV+ +E++        + +G LD +V+    S A  P ++      +     F K  DI
Sbjct: 59  CDVSNDEEIKELFAEVKKDWGKLDGLVH----SIAFAPKVQLKGPFLDTSRKGFLKALDI 114

Query: 127 NVKGVFHGM-KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN------ 179
           +       + K A  IM P   G+I+++             +Y GS+  V G N      
Sbjct: 115 SAYS-LVSLAKAALPIMNPG--GSIVTL-------------SYLGSERVVPGYNVMGVAK 158

Query: 180 -------KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
                  + +A ELG+ GIRVN +S   + T LA + +   ++  +       +  + A 
Sbjct: 159 AALESSVRYLAYELGRKGIRVNAISAGPIKT-LAASGITGFDKMLE-------YSEQRAP 210

Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
           + G  +TA +V N   FL SD +  I+G  + VDGG+  +
Sbjct: 211 L-GRNVTAEEVGNTAAFLLSDLSSGITGEIIYVDGGYHIM 249

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 93.5 bits (233), Expect = 1e-21
 Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 27/247 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC---QSLGGEPDTFFC 71
              G++ ++TG  +GIG  T   F + GA+V  +D+ +   ++     ++ G     +  
Sbjct: 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAY-- 369

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKG 130
             DV+  + + +  +    + G  DI+VNNAGI  A    D    D   +++V D+N+ G
Sbjct: 370 RVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAED---WDRVLDVNLWG 426

Query: 131 VFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           V HG +   R M+ + T G I+++ S A         AY  SK AVL L++ + AEL   
Sbjct: 427 VIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAA 486

Query: 190 GIRVNCVSPYAVATGL-ALAHLP-----EEERTE---DAMVGFRNFVARNANMQGTELTA 240
           GI V  + P  V T + A          +E R     D +   R +        G E  A
Sbjct: 487 GIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGY--------GPEKVA 538

Query: 241 NDVANAV 247
             + +AV
Sbjct: 539 KAIVDAV 545

Length = 582

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 88.9 bits (221), Expect = 4e-21
 Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 11/196 (5%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
            LITG ++GIG +  R F K G  V +A    D  D L  ++               DVT
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSV--EVEI-LDVT 57

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGM 135
            EE     +     + G LD+++ NAG+  G    D+       F +  D N+ G    +
Sbjct: 58  DEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLS---FKAFRETIDTNLLGAAAIL 114

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           + A      + +G ++ I SVA   G  G  AY+ SK A+  L +++  ++ K GIRV  
Sbjct: 115 EAALPQFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTV 174

Query: 196 VSPYAVATGLALAHLP 211
           ++P  + T L      
Sbjct: 175 INPGFIDTPLTANMFT 190

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 89.0 bits (221), Expect = 7e-21
 Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 19/217 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA--DVQDNLGQQV--CQSLGGEPDTFFC 71
           L G++AL+TG + GIG        + GA V I    +   L       ++ GG+     C
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGK-----C 55

Query: 72  H---CDVTKEEDVCSAVD-LTVEKFGTLDIMVNNA-----GISGAPCPDIREADLSEFEK 122
               CD + +++V +  + +  E+ G LDI+VNNA      I         E   + ++ 
Sbjct: 56  IPVRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDD 115

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           + ++ ++  +    +AA +M+   KG I+ I S  G +  L   AY   K A+  +  ++
Sbjct: 116 INNVGLRAHYACSVYAAPLMVKAGKGLIVIISST-GGLEYLFNVAYGVGKAAIDRMAADM 174

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA 219
           A EL  +G+ V  + P  V T L L    ++E +  A
Sbjct: 175 AHELKPHGVAVVSLWPGFVRTELVLEMPEDDEGSWHA 211

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 88.4 bits (219), Expect = 1e-20
 Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 46/279 (16%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-----PDT-FFCHC 73
            A++TG A  IG S     H+ G +V +     +       +L  E     P++   C  
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVL---HYHRSAAAASTLAAELNARRPNSAVTCQA 59

Query: 74  DVTKEE---DVCSA-VDLTVEKFGTLDIMVNNAGISGAPCPDIR--EADLSEFEKVFDIN 127
           D++        C A +D     FG  D++VNNA  +  P P +R    +    +K  ++ 
Sbjct: 60  DLSNSATLFSRCEAIIDACFRAFGRCDVLVNNAS-AFYPTPLLRGDAGEGVGDKKSLEVQ 118

Query: 128 VKGVFHGMKHAARIMI-----------PQTKGTIISICSVAGAIGG---LGPHAYTGSKH 173
           V  +F     A   +I            + + T +SI ++  A+     LG   YT +KH
Sbjct: 119 VAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKH 178

Query: 174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLAL--AHLPEEERTEDAMVGFRNFVARNA 231
           A+ GL ++ A EL    IRVN V+P     GL+L    +P E + +     +R    R  
Sbjct: 179 ALEGLTRSAALELAPLQIRVNGVAP-----GLSLLPDAMPFEVQED-----YR----RKV 224

Query: 232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
            +   E +A  +A+ V+FL S +A+YI+GT + VDGG +
Sbjct: 225 PLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLS 263

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 87.8 bits (218), Expect = 2e-20
 Identities = 47/135 (34%), Positives = 63/135 (46%), Gaps = 6/135 (4%)

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDINVKGV 131
           DVT    V +AV+  VE FG LDI+VNNAG    G     I E   SE     D N  G 
Sbjct: 57  DVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGM----IEEVTESEARAQIDTNFFGA 112

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
               +     +  Q  G II I S+ G         Y  SK A+ G+++ +A E+ ++GI
Sbjct: 113 LWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGI 172

Query: 192 RVNCVSPYAVATGLA 206
           +V  V P   +T  A
Sbjct: 173 KVTLVEPGGYSTDWA 187

Length = 275

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 86.7 bits (215), Expect = 3e-20
 Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 8/178 (4%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQ---QVCQSLGGEPDTFFCHCDV 75
           VA + G   G+G +  R F   G  V   A  +  L      + +  GG         D 
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGG--SAKAVPTDA 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
             E++V +  DL  E+ G L+++V NAG +    P I E     FEKV+++   G F   
Sbjct: 59  RDEDEVIALFDLIEEEIGPLEVLVYNAG-ANVWFP-ILETTPRVFEKVWEMAAFGGFLAA 116

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           + AA+ M+ + +GTII   + A   G  G  A+ G+K A+  L +++A ELG  GI V
Sbjct: 117 REAAKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 86.4 bits (214), Expect = 4e-20
 Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 21/257 (8%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQ---SLGGEPDTFFCHCDV 75
           +AL+TGG+ GIG +T  L  + G  V +   Q+ +  Q+V       GG+   F    D+
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGK--AFVLQADI 60

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           + E  V +      +    L  +VNNAGI    C  +         +V   NV G F   
Sbjct: 61  SDENQVVAMFTAIDQHDEPLAALVNNAGILFTQC-TVENLTAERINRVLSTNVTGYFLCC 119

Query: 136 KHAARIMIPQ---TKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYGI 191
           + A + M  +   + G I+++ S A  +G  G +  Y  SK A+  L   ++ E+   GI
Sbjct: 120 REAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGI 179

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVNCV P  + T         E        G  + V  N  MQ       +VA A+++L 
Sbjct: 180 RVNCVRPGFIYT---------EMHASGGEPGRVDRVKSNIPMQRGG-QPEEVAQAIVWLL 229

Query: 252 SDEARYISGTNLMVDGG 268
           SD+A Y++G+ + + GG
Sbjct: 230 SDKASYVTGSFIDLAGG 246

Length = 247

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 86.2 bits (214), Expect = 7e-20
 Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 19/196 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +VAL+TG ++GIG++T R     G  V  A    D  ++L      SLG  P +     D
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-----ASLGVHPLSL----D 54

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKGVF 132
           VT E  + +AVD  + + G +D++VNNAG    GA    I +  + E  + F++N+ G  
Sbjct: 55  VTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGA----IEDVPIDEARRQFEVNLFGAA 110

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +     M  Q  G II+I S+ G I       Y  +K A+ G +  +  E+  +GI 
Sbjct: 111 RLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGID 170

Query: 193 VNCVSPYAVATGLALA 208
           V  + P  + T     
Sbjct: 171 VVVIEPGGIKTEWGDI 186

Length = 273

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 86.1 bits (214), Expect = 9e-20
 Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 8/183 (4%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
            +  LITG ++G G +  +     G +V +  V+    +   ++L  +        DVT 
Sbjct: 4   MKTWLITGVSSGFGRALAQAALAAGHRV-VGTVRSEAARADFEALHPD-RALARLLDVTD 61

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKGVFHGM 135
            + + + V      FG +D++VNNAG    GA    I E+ L+E  + F++NV G     
Sbjct: 62  FDAIDAVVADAEATFGPIDVLVNNAGYGHEGA----IEESPLAEMRRQFEVNVFGAVAMT 117

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K     M  + +G I++I S+ G I   G   Y GSK A+ G+++++A E+  +GI V  
Sbjct: 118 KAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTA 177

Query: 196 VSP 198
           V P
Sbjct: 178 VEP 180

Length = 277

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 85.7 bits (213), Expect = 1e-19
 Identities = 67/276 (24%), Positives = 110/276 (39%), Gaps = 51/276 (18%)

Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  LI G A    I     +   + GA++      + L ++V +            C
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPC 63

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR----EADLSEFEKVFDINVK 129
           DVT +E + +      +K+G LD +V+   I+ AP  +++    +     F    DI+  
Sbjct: 64  DVTNDESIDALFATIKKKWGKLDGLVH--SIAFAPKEELKGDYLDTSREGFLIAMDISAY 121

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN---------- 179
                 K A  +M     G+I+++              Y GS+  V   N          
Sbjct: 122 SFTALAKAARPLMNN--GGSILTL-------------TYLGSERVVPNYNVMGVAKAALE 166

Query: 180 ---KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVARNANM 233
              + +AA+LGK GIRVN +S   + T LA +           +  FR        NA +
Sbjct: 167 ASVRYLAADLGKEGIRVNAISAGPIRT-LAAS----------GIGDFRKMLKENEANAPL 215

Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           +   +T  +V N   FL SD +  I+G  + VD G+
Sbjct: 216 RRN-VTIEEVGNTAAFLLSDLSSGITGEIIYVDSGY 250

Length = 259

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 85.5 bits (212), Expect = 1e-19
 Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 24/249 (9%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIA-----DVQDNLGQQVCQSLGGEPDTFFCH 72
            ++A++TG ++G G  T     K G  V IA     + Q+NL  Q  Q    +       
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLV-IATMRNPEKQENLLSQATQLNLQQNIKVQ-Q 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT +  +     L +++ G +D++VNNAG +      + E  + E+ K F+ NV G  
Sbjct: 61  LDVTDQNSI-HNFQLVLKEIGRIDLLVNNAGYANGGF--VEEIPVEEYRKQFETNVFGAI 117

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIG--GLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
              +     M  Q  G II+I S++G +G  GL P  Y  SK+A+ G ++++  EL  +G
Sbjct: 118 SVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSP--YVSSKYALEGFSESLRLELKPFG 175

Query: 191 IRVNCVSP-------YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
           I V  + P       + V   LA          ++ M   +  +   ++  G      DV
Sbjct: 176 IDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFG---NPIDV 232

Query: 244 ANAVLFLAS 252
           AN ++ +A 
Sbjct: 233 ANLIVEIAE 241

Length = 280

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 83.9 bits (208), Expect = 3e-19
 Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 9/192 (4%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEE 79
            LITG + GIG   VR     G    IA  +D        +LG           DVT E 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 80  DVCSAVDLTVEKFGT--LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
               + +   E+ G   LD+++NNAGI  +  P   E D  +  +VF +NV G     + 
Sbjct: 61  A--ESAEAVAERLGDAGLDVLINNAGILHSYGP-ASEVDSEDLLEVFQVNVLGPLLLTQA 117

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGP---HAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
              +++   +  II+I S  G+IG       ++Y  SK A+  L K++A EL + GI V 
Sbjct: 118 FLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGITVV 177

Query: 195 CVSPYAVATGLA 206
            + P  V T + 
Sbjct: 178 SLHPGWVRTDMG 189

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 83.2 bits (205), Expect = 8e-19
 Identities = 81/268 (30%), Positives = 130/268 (48%), Gaps = 27/268 (10%)

Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPD 67
           ++ L G+VAL+TG + GIG +        GA V I         D   +++ +S GG+  
Sbjct: 1   MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREI-ESNGGK-- 57

Query: 68  TFFCHCDVTKEEDVCSAVD-LTVE---KFGT--LDIMVNNAGISGAPCPDIREADLSEFE 121
            F    D+   + V   V+ L  E   + GT  +DI+VNNAGI       I       F+
Sbjct: 58  AFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGT--IENTTEEIFD 115

Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           ++  +N+K  F  ++    ++  + +G +I+I S    +G  G  AY  SK A+  +   
Sbjct: 116 EIMAVNIKAPFFLIQQTLPLL--RAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLP 173

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           +A  LG+ GI VN + P    T +    L + E         RNF A N+++ G      
Sbjct: 174 LAKHLGERGITVNTIMPGYTKTDINAKLLDDPE--------IRNF-ATNSSVFGRIGQVE 224

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGF 269
           D+A+AV FLAS ++R+++G  + V GGF
Sbjct: 225 DIADAVAFLASSDSRWVTGQIIDVSGGF 252

Length = 254

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 82.9 bits (205), Expect = 9e-19
 Identities = 78/272 (28%), Positives = 119/272 (43%), Gaps = 29/272 (10%)

Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCI--------ADVQDNLGQQVCQSL 62
           A   L G+V LI GGA  +G    R     GAK V I        AD ++ +     ++ 
Sbjct: 2   ADHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVA--AVKAA 59

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFE 121
           G +   F    D+T    V    D     FG  DI +N  G +   P  +I EA   E++
Sbjct: 60  GAKAVAF--QADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEA---EYD 114

Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISIC-SVAGAIGGLGPHAYTGSKHAVLGLNK 180
           ++F +N K  F  +K A R +     G I+++  S+ GA       AY GSK  V    +
Sbjct: 115 EMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLGAFTP-FYSAYAGSKAPVEHFTR 171

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT- 239
             + E G  GI V  V P  + T       P+E    +A V +    A  +    T LT 
Sbjct: 172 AASKEFGARGISVTAVGPGPMDTPF---FYPQE--GAEA-VAYHKTAAALSPFSKTGLTD 225

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
             D+   + FL +D   +I+G  ++++GG+T+
Sbjct: 226 IEDIVPFIRFLVTD-GWWITGQTILINGGYTT 256

Length = 257

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 84.5 bits (210), Expect = 1e-18
 Identities = 74/270 (27%), Positives = 114/270 (42%), Gaps = 51/270 (18%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADV---QDNLGQQVCQSLGGEPDTFFCH 72
           L G+VAL+TG A GIG +   +  + GA V   DV    + L   V   +GG        
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEAL-AAVANRVGGTA----LA 262

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVK- 129
            D+T  +      +   E+ G LDI+V+NAGI+     D   A++ E  ++ V  +N+  
Sbjct: 263 LDITAPDAPARIAEHLAERHGGLDIVVHNAGIT----RDKTLANMDEARWDSVLAVNLLA 318

Query: 130 -----------GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
                      G                 G I+ + S++G  G  G   Y  SK  V+GL
Sbjct: 319 PLRITEALLAAGALGDG------------GRIVGVSSISGIAGNRGQTNYAASKAGVIGL 366

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-MQGTE 237
            + +A  L + GI +N V+P  + T +  A +P   R             R  N +Q   
Sbjct: 367 VQALAPLLAERGITINAVAPGFIETQMT-AAIPFATRE----------AGRRMNSLQQGG 415

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDG 267
           L   DVA  + +LAS  +  ++G  + V G
Sbjct: 416 LPV-DVAETIAWLASPASGGVTGNVVRVCG 444

Length = 450

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 82.7 bits (204), Expect = 1e-18
 Identities = 63/191 (32%), Positives = 96/191 (50%), Gaps = 6/191 (3%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCDVT 76
           GR A+ITGGA+GIG +T   F + GA+V + DV     +Q    L  E  D     CDV 
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR 65

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
             E+V    D      G +D++ +NAGI  G P  ++   D   +  V D+++ G  H +
Sbjct: 66  HREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDD---WRWVIDVDLWGSIHTV 122

Query: 136 K-HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +    R++   T G ++   S AG +   G  AY  +K+ V+GL + +A E+   GI V+
Sbjct: 123 EAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVS 182

Query: 195 CVSPYAVATGL 205
            + P  V T L
Sbjct: 183 VLCPMVVETNL 193

Length = 275

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 81.9 bits (203), Expect = 2e-18
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 13/187 (6%)

Query: 23  ITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC---DVTKEE 79
           ITG ++GIG++  R + + GA + +   + +  Q     L              DV   +
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAAR---VSVYAADVRDAD 63

Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREA-DLSEFEKVFDINVKGVFHGMKH 137
            + +A    +   G  D+++ NAGIS G       E  DL+ F +V D N  G+    + 
Sbjct: 64  ALAAAAADFIAAHGLPDVVIANAGISVGT---LTEEREDLAVFREVMDTNYFGMVATFQP 120

Query: 138 AARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
               M    +GT++ I SVAG + GL G  AY+ SK A +   +++  EL   G+RV  +
Sbjct: 121 FIAPMRAARRGTLVGIASVAG-VRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTI 179

Query: 197 SPYAVAT 203
           +P  + T
Sbjct: 180 APGYIRT 186

Length = 257

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 80.7 bits (200), Expect = 3e-18
 Identities = 59/192 (30%), Positives = 85/192 (44%), Gaps = 11/192 (5%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSL---GGEPDTFFCHCD 74
           +VAL+TG   GIG   VR   K G    I   +D   GQ   + L   G      F   D
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVR--FHQLD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT +  + +A D   EK+G LDI+VNNAGI+     D       +  +    N  G    
Sbjct: 59  VTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTP-TREQARETMKTNFFGTVDV 117

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            +    ++     G I+++ S  G++      AY  SK A+  L + +A EL + GI+VN
Sbjct: 118 TQALLPLLKKSPAGRIVNVSSGLGSLTS----AYGVSKAALNALTRILAKELKETGIKVN 173

Query: 195 CVSPYAVATGLA 206
              P  V T + 
Sbjct: 174 ACCPGWVKTDMG 185

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 81.2 bits (201), Expect = 4e-18
 Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 13/192 (6%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQ--SLGGEPDTFFCH--CDV 75
             +TG A+GIG +T       GA++ + D   D L Q V    +LGG   T   H   D+
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGG---TVPEHRALDI 59

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  + V +         G++D+++N AGIS     D    +  ++ ++ D+N+ G  H +
Sbjct: 60  SDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHE--QWRRMVDVNLMGPIHVI 117

Query: 136 KHAARIMIPQTKG-TIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +     M+   +G  ++++ S AG +  L  H AY+ SK  + GL++ +  +L ++GI V
Sbjct: 118 ETFVPPMVAAGRGGHLVNVSSAAGLVA-LPWHAAYSASKFGLRGLSEVLRFDLARHGIGV 176

Query: 194 NCVSPYAVATGL 205
           + V P AV T L
Sbjct: 177 SVVVPGAVKTPL 188

Length = 272

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 79.7 bits (197), Expect = 1e-17
 Identities = 66/274 (24%), Positives = 107/274 (39%), Gaps = 42/274 (15%)

Query: 16  LVGRVALITGGA--TGIGESTVRLFHKHGAKVCI-----------ADVQDNLGQQVCQSL 62
           L+ ++AL+TG +   GIG +  R     G  +               + D     + + +
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 63  GGEPDTFFCH---CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
                   C     D+++            E+ G   I++NNA  S      + E    +
Sbjct: 63  ESYGVR--CEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHT--RLEELTAEQ 118

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH----AYTGSKHAV 175
            +K + +NV+         A+    +  G II++ S  G    LGP     AY  +K A+
Sbjct: 119 LDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTS--GQS--LGPMPDELAYAATKGAI 174

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
               K++A EL + GI VN V+P    TG        EE     +  F          QG
Sbjct: 175 EAFTKSLAPELAEKGITVNAVNPGPTDTGWI-----TEELKHHLVPKF---------PQG 220

Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
                 D A  + FL S+EA++I+G  +  +GGF
Sbjct: 221 RVGEPVDAARLIAFLVSEEAKWITGQVIHSEGGF 254

Length = 256

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 78.9 bits (194), Expect = 3e-17
 Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 25/258 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-------LGQQVCQSLGGEPDTFFC 71
           R+A +TGG  GIG S  +  HK G KV +A    N       L  Q  ++LG   D    
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKV-VAGCGPNSPRRVKWLEDQ--KALGF--DFIAS 58

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             +V   +   +A D    + G +D++VNNAGI+       R+    ++  V D N+  +
Sbjct: 59  EGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVV--FRKMTREDWTAVIDTNLTSL 116

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F+  K     M+ +  G II+I SV G  G  G   Y+ +K  + G   ++A E+   G+
Sbjct: 117 FNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGV 176

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            VN VSP  + T +  A  P+      A +  R              + +++ + V +LA
Sbjct: 177 TVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLG-----------SPDEIGSIVAWLA 225

Query: 252 SDEARYISGTNLMVDGGF 269
           S+E+ + +G +  ++GG 
Sbjct: 226 SEESGFSTGADFSLNGGL 243

Length = 246

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 78.7 bits (194), Expect = 6e-17
 Identities = 79/259 (30%), Positives = 116/259 (44%), Gaps = 19/259 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFF 70
           RL GR ALITG  +GIG +T   F + GA + +     + QD    +V Q +  E     
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQD--AAEVVQLIQAEGRKAV 109

Query: 71  CHCDVTKEEDVCSA-VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
                 K+E  C   V+  V++ G LDI+VN AG   A   DI +    +F+  F  NV 
Sbjct: 110 ALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTA-VKDIADITTEQFDATFKTNVY 168

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            +F   K A   + P    +II+  S+           Y  +K A++   K +A ++ + 
Sbjct: 169 AMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEK 226

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRVN V+P  V T L  +     E+  D   G    + R    Q  E+     A   + 
Sbjct: 227 GIRVNAVAPGPVWTPLQPSGGQPPEKIPD--FGSETPMKRPG--QPVEM-----APLYVL 277

Query: 250 LASDEARYISGTNLMVDGG 268
           LAS E+ Y++G    V GG
Sbjct: 278 LASQESSYVTGEVFGVTGG 296

Length = 300

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 77.1 bits (190), Expect = 1e-16
 Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 34/271 (12%)

Query: 15  RLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIA-----------DVQDNLGQQVCQS 61
           +L  +VA++TG     GIG +  +   + GA +               V  +   Q+ + 
Sbjct: 3   QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE 62

Query: 62  LGGEPDTFFCHC---DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS 118
           L    +         D+T+ +     ++   E+ G   I+VNNA  S     D       
Sbjct: 63  L--LKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNN--DFSNLTAE 118

Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           E +K + +NV+         AR    ++ G II++ S       +G  AY  +K A+  L
Sbjct: 119 ELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDAL 178

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
             ++AAE+   GI VN ++P    TG        EE  +  +  F           G   
Sbjct: 179 TSSLAAEVAHLGITVNAINPGPTDTGWM-----TEEIKQGLLPMFP---------FGRIG 224

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGF 269
              D A  + FLAS+EA +I+G  +  +GGF
Sbjct: 225 EPKDAARLIKFLASEEAEWITGQIIHSEGGF 255

Length = 256

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 76.5 bits (188), Expect = 1e-16
 Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 5/203 (2%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ---SLGG-EPDTFFC 71
           L  R+ L+TG + GIG      + ++GA V +    +   +QV       GG +P  F  
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
                  E+           +  LD +++NAG+ G  CP + E +   ++ V  +NV   
Sbjct: 62  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-LSEQNPQVWQDVXQVNVNAT 120

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F   +    +++    G+++   S  G  G     AY  SK A  GL + +A E  +  +
Sbjct: 121 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNL 180

Query: 192 RVNCVSPYAVATGLALAHLPEEE 214
           RVNC++P    T +  +  P E+
Sbjct: 181 RVNCINPGGTRTAMRASAFPTED 203

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 77.0 bits (190), Expect = 2e-16
 Identities = 70/271 (25%), Positives = 112/271 (41%), Gaps = 33/271 (12%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHC 73
            L G+  LITG + GIG +    F   G  + + A   D L                 H 
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHA 63

Query: 74  -DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++  E      +    + G +DI+VNNAG    P   + + D + +   +++ V    
Sbjct: 64  LDLSSPEAR----EQLAAEAGDIDILVNNAG--AIPGGGLDDVDDAAWRAGWELKV---- 113

Query: 133 HGMKHAARIMIPQTK----GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            G     R+  P+ K    G I+++   AG          +    A++   + +  +   
Sbjct: 114 FGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLD 173

Query: 189 YGIRVNCVSPYAVAT--------GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
            G+RV  V+P  VAT        G A A L +E R ++ + G    + R A       T 
Sbjct: 174 DGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLP--LGRPA-------TP 224

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTS 271
            +VA+ V FLAS  + Y SGT + VDGG ++
Sbjct: 225 EEVADLVAFLASPRSGYTSGTVVTVDGGISA 255

Length = 259

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 75.7 bits (187), Expect = 5e-16
 Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 44/222 (19%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQV------CQSLGGE 65
           L G+   ITG + GIG +      + GA + I    A+    L   +       ++ GG+
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ 63

Query: 66  --PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEK 122
             P       DV  E+ V +AV   VE+FG +DI VNNA  I+        +  +  F+ 
Sbjct: 64  ALP----LVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTG---TEDTPMKRFDL 116

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGT----IISIC---SVAGAIGGLGPH-AYTGSKH- 173
           +  INV+G F  +  A    +P  K +    I+++    ++        PH AYT +K+ 
Sbjct: 117 MQQINVRGTF-LVSQAC---LPHLKKSENPHILTLSPPLNLDPK--WFAPHTAYTMAKYG 170

Query: 174 ---AVLGLNKNVAAELGKYGIRVNCVSP-YAVATGLALAHLP 211
                LGL    A E    GI VN + P   +AT  A+ +L 
Sbjct: 171 MSLCTLGL----AEEFRDDGIAVNALWPRTTIATA-AVRNLL 207

Length = 273

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 74.4 bits (183), Expect = 1e-15
 Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 56/280 (20%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLG--------- 63
           G+  +I+GG  GIG++ V  F + G  +        +  + + + + Q  G         
Sbjct: 8   GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLN 67

Query: 64  -GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-------APCPDIREA 115
             EP+T+    ++ K+ D         E F  +D  ++NA ISG            ++  
Sbjct: 68  ILEPETY---KELFKKID---------EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPK 115

Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
            L+    ++   V     G + AA+ M     G+IIS+ S    +       +  SK AV
Sbjct: 116 GLN---NIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAV 172

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV-ARNANMQ 234
             + K  A ELG+  IRVN VS   + T              DA+  F N+   +    +
Sbjct: 173 ETMVKYAATELGEKNIRVNAVSGGPIDT--------------DALKAFTNYEEVKAKTEE 218

Query: 235 GTEL----TANDVANAVLFLASDEARYISGTNLMVDGGFT 270
            + L       D+A A LFL S++A +++G  ++VDGG T
Sbjct: 219 LSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGTT 258

Length = 260

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLGQQVCQSL----GGEPDTFFCH 72
           G  A++TG   GIG++      K G  V  I+  Q+ L   V + +    G E  T    
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKL-DAVAKEIEEKYGVETKTI--A 57

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDI--MVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
            D +  +D+   ++  +E    LDI  +VNN GIS   P   + E    E + + ++NV 
Sbjct: 58  ADFSAGDDIYERIEKELE---GLDIGILVNNVGISHSIPEYFL-ETPEDELQDIINVNVM 113

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
                 +     M+ + KG I++I S AG I       Y+ SK  +   ++ +  E    
Sbjct: 114 ATLKMTRLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQ 173

Query: 190 GIRVNCVSPYAVAT 203
           GI V  + PY VAT
Sbjct: 174 GIDVQSLLPYLVAT 187

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 73.0 bits (179), Expect = 2e-15
 Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 27/255 (10%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCI------ADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L+TG + GIG +        G ++C+      +D +  +     Q        F    DV
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQF----DV 57

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHG 134
                  + ++  + + G    +V NAGI+  A  P + E D   ++ V   N+ G ++ 
Sbjct: 58  ADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEED---WDIVIHTNLDGFYNV 114

Query: 135 MKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +      MI   +G  II++ SV+G +G  G   Y+ +K  ++G  K +A EL K  I V
Sbjct: 115 IHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITV 174

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           NC++P  + T +           E  +      V  N   Q       +VA+   FL SD
Sbjct: 175 NCIAPGLIDTEML-------AEVEHDLDEALKTVPMNRMGQ-----PAEVASLAGFLMSD 222

Query: 254 EARYISGTNLMVDGG 268
            A Y++   + V+GG
Sbjct: 223 GASYVTRQVISVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 73.1 bits (180), Expect = 5e-15
 Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 35/216 (16%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLG------QQVC----QSLGGEPDTFFC 71
           LITG  +G G    +     G  V +A      G      ++VC    ++L         
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTV-LAGCLTKNGPGAKELRRVCSDRLRTL--------- 53

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDI--MVNNAGISG--APCPDIREADLSEFEKVFDIN 127
             DVTK E +  A     E  G   +  +VNNAGI G       +   D   + K  ++N
Sbjct: 54  QLDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDD---YRKCMEVN 110

Query: 128 VKGVFHGMKHAARIMIP---QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
                 G     +  +P   + KG ++++ S+ G +      AY  SK AV   + ++  
Sbjct: 111 ----LFGTVEVTKAFLPLLRRAKGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRR 166

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAM 220
           EL  +G++V+ + P    TG+        E+    +
Sbjct: 167 ELQPWGVKVSIIEPGNFKTGITGNS-ELWEKQAKKL 201

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 71.7 bits (176), Expect = 7e-15
 Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 7/213 (3%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
            +  L+TG   GIG++ V     HGAK   A V+D        +  G         DVT 
Sbjct: 3   DKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYG-DKVVPLRLDVTD 61

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            E + +A      +   +D+++NNAG+   P   + E  L   ++  D+NV G+    + 
Sbjct: 62  PESIKAAA----AQAKDVDVVINNAGVL-KPATLLEEGALEALKQEMDVNVFGLLRLAQA 116

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
            A ++     G I+++ SVA          Y+ SK A   L + + AEL   G  V  V 
Sbjct: 117 FAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVLSVH 176

Query: 198 PYAVATGLAL-AHLPEEERTEDAMVGFRNFVAR 229
           P  + T +A  A  P+E     A    +   A 
Sbjct: 177 PGPIDTRMAAGAGGPKESPETVAEAVLKALKAG 209

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 72.3 bits (177), Expect = 9e-15
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 25/262 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSL--GGEPDT 68
           RL  R AL+TGG +GIG +    + + GA V I     + +D   Q V + +   G    
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEED--AQDVKKIIEECGRKAV 103

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                D++ E+   S V    +  G LDIM   AG   A  PDI +    +F+K F INV
Sbjct: 104 LL-PGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVA-IPDIADLTSEQFQKTFAINV 161

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA--YTGSKHAVLGLNKNVAAEL 186
             +F  +   A  ++P+   +II+  S+        PH   Y  +K A+L  ++ +A ++
Sbjct: 162 FALFW-LTQEAIPLLPK-GASIITTSSIQAY--QPSPHLLDYAATKAAILNYSRGLAKQV 217

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            + GIRVN V+P  + T L ++      +T+D +  F          Q  EL     A  
Sbjct: 218 AEKGIRVNIVAPGPIWTALQISG----GQTQDKIPQFGQQTPMKRAGQPAEL-----APV 268

Query: 247 VLFLASDEARYISGTNLMVDGG 268
            ++LAS E+ Y++     V GG
Sbjct: 269 YVYLASQESSYVTAEVHGVCGG 290

Length = 294

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 13/195 (6%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G   LITGG +GIG +  R F + G  V I   ++    +  + L           DV
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPNIHTI---VLDV 59

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-----GAPCPDIREADLSEFEKVFDINVKG 130
              E V +  +  + ++  LDI++NNAGI        P      +DL + +   D N+ G
Sbjct: 60  GDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDP-----ASDLDKADTEIDTNLIG 114

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
               +K     +  Q + TI+++ S    +       Y  +K A+      +  +L   G
Sbjct: 115 PIRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTG 174

Query: 191 IRVNCVSPYAVATGL 205
           + V  + P AV T L
Sbjct: 175 VEVVEIVPPAVDTEL 189

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 41/198 (20%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQ---SLGGEPDTFF 70
            LVG+V LITG ++GIG +T     + GA V + A   + L  ++     + GG    + 
Sbjct: 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEAL-DELVAEIRAKGGTAHAY- 425

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-DLS-----EFEKVF 124
             CD+T    V   V   + + G +D +VNNAG S      IR + + S     ++E+  
Sbjct: 426 -TCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRS------IRRSVENSTDRFHDYERTM 478

Query: 125 DINVKGVFHGMKHAARI-------MIPQTKGTIISICSVAGAIGGL--GPH--AYTGSKH 173
            +N  G       A R+       M  +  G ++++ S    IG     P   AY  SK 
Sbjct: 479 AVNYFG-------AVRLILGLLPHMRERRFGHVVNVSS----IGVQTNAPRFSAYVASKA 527

Query: 174 AVLGLNKNVAAELGKYGI 191
           A+   +   A+E    GI
Sbjct: 528 ALDAFSDVAASETLSDGI 545

Length = 657

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 70.0 bits (172), Expect = 4e-14
 Identities = 56/189 (29%), Positives = 81/189 (42%), Gaps = 19/189 (10%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQ-----DNLGQQVCQSLGGEPDTFFCHCDVT 76
           LITG  +G G        + G  V IA VQ       L  +     G          D+T
Sbjct: 6   LITGAGSGFGREVALRLARKGHNV-IAGVQIAPQVTALRAEA-ARRGLALRVE--KLDLT 61

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              D   A +  V      D+++NNAGI       DI    +    ++F+ NV G     
Sbjct: 62  DAIDRAQAAEWDV------DVLLNNAGIGEAGAVVDI---PVELVRELFETNVFGPLELT 112

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +   R M+ + KG ++   S+AG I G    AY  SKHA+  + + + AEL  +GI+V  
Sbjct: 113 QGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVAT 172

Query: 196 VSPYAVATG 204
           V+P    TG
Sbjct: 173 VNPGPYLTG 181

Length = 257

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 69.6 bits (171), Expect = 5e-14
 Identities = 71/266 (26%), Positives = 106/266 (39%), Gaps = 68/266 (25%)

Query: 34  TVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF- 92
           T RL    GA+V   D ++          G   D F    D+        ++D  V    
Sbjct: 1   TARLLRFLGARVIGVDRREP---------GMTLDGFI-QADLGDPA----SIDAAVAALP 46

Query: 93  GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK--GTI 150
           G +D + N AG+ G         +L     V  +N    F G++H    ++P+    G I
Sbjct: 47  GRIDALFNIAGVPG-----TAPVEL-----VARVN----FLGLRHLTEALLPRMAPGGAI 92

Query: 151 ISICSVAGA--------IGGLG-------------------PHAYTGSKHAVLGLN-KNV 182
           +++ S+AGA           L                       Y  SK A++    +  
Sbjct: 93  VNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQA 152

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
               G  GIRVNCV+P  V T + L           +M+G +  V  +A   G   TA++
Sbjct: 153 QPWFGARGIRVNCVAPGPVFTPI-LGDFR-------SMLG-QERVDSDAKRMGRPATADE 203

Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
            A  ++FL SD AR+I+G NL VDGG
Sbjct: 204 QAAVLVFLCSDAARWINGVNLPVDGG 229

Length = 241

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 69.4 bits (170), Expect = 5e-14
 Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 35/248 (14%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVC--------IADVQDNLGQQVCQSLGGEPDTFFC 71
           + L+TG   G GE   R F + G KV         + +++D LG  +          +  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNL----------YIA 51

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV     +   +     ++  +D++VNNAG++    P   +A + ++E + D N KG+
Sbjct: 52  QLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEP-AHKASVEDWETMIDTNNKGL 110

Query: 132 FHGMKHAARI-MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            + M  A    M+ +  G II+I S AG+    G + Y  +K  V   + N+  +L    
Sbjct: 111 VY-MTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTA 169

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-NANMQGTE-LTANDVANAVL 248
           +RV  + P  V              TE + V F+    +     Q T  LT  DV+ AV 
Sbjct: 170 VRVTDIEPGLVGG------------TEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVW 217

Query: 249 FLASDEAR 256
           ++A+  A 
Sbjct: 218 WVATLPAH 225

Length = 248

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 68.6 bits (167), Expect = 1e-13
 Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 21/261 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQV--CQSLGGEPDTFFC 71
           L G+VAL+TG + GIG +  +     GA V I   + ++   + V   QS GG   +   
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 72  HCD-VTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
           + + +   E + S++D  ++        DI++NNAGI   P   I E     F+++  +N
Sbjct: 62  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI--GPGAFIEETTEQFFDRMVSVN 119

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
            K  F  ++ A   +   ++  II+I S A  I      AY+ +K A+  +   +A +LG
Sbjct: 120 AKAPFFIIQQALSRLRDNSR--IINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLG 177

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
             GI VN + P  + T +        E   D M+          N  G      D+A+  
Sbjct: 178 ARGITVNAILPGFIKTDM------NAELLSDPMMKQYATTISAFNRLG---EVEDIADTA 228

Query: 248 LFLASDEARYISGTNLMVDGG 268
            FLAS ++R+++G  + V GG
Sbjct: 229 AFLASPDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 68.2 bits (167), Expect = 1e-13
 Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 33/209 (15%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNL------GQQVCQSLGGE 65
           L G+   ITG + GIG++      + GA V I    A+    L        +  ++ GG+
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
                C  D+  E+ V +AV+  VEKFG +DI+VNNA  S        +  +  ++ +  
Sbjct: 61  --ALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNA--SAISLTGTLDTPMKRYDLMMG 116

Query: 126 INVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIG----GLGPH-AYTGSKHA----V 175
           +N +G +      ++  +P   K     I +++  +         H AYT +K+     V
Sbjct: 117 VNTRGTY----LCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCV 172

Query: 176 LGLNKNVAAELGKYGIRVNCVSP-YAVAT 203
           LG+    A E    GI VN + P  A+AT
Sbjct: 173 LGM----AEEFKPGGIAVNALWPRTAIAT 197

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 69.0 bits (169), Expect = 1e-13
 Identities = 71/267 (26%), Positives = 109/267 (40%), Gaps = 37/267 (13%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGGEPDTFFCHC- 73
           L G+VA++TG A G+G +      + GA V + DV   L    V   +            
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDINV 128
           D+++       V   V   G LDI+VNNAGI        R+  L      E++ V  +++
Sbjct: 70  DISQRATADELVATAVG-LGGLDIVVNNAGI-------TRDRMLFNMSDEEWDAVIAVHL 121

Query: 129 KGVFHGMKHAARIMIPQTK-------GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           +G F   ++AA     + K       G I++  S AG +G +G   Y  +K  +  L  +
Sbjct: 122 RGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLS 181

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
            A  LG+YG+R N + P A               T D      +  A   +     L+  
Sbjct: 182 AARALGRYGVRANAICPRA-----------RTAMTADVFGDAPDVEAGGID----PLSPE 226

Query: 242 DVANAVLFLASDEARYISGTNLMVDGG 268
            V   V FLAS  A  ++G   +V G 
Sbjct: 227 HVVPLVQFLASPAAAEVNGQVFIVYGP 253

Length = 306

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 23/255 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+   I G + G+G +      K GA+VCI    +N  +++ ++L    +  +   D
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+  E   + ++   +    +D +V   G       +    + S  E++   ++K   + 
Sbjct: 62  VSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVE----EFSGLEEMLTNHIKIPLYA 117

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +  + R +   +  +I+ + S++G         +Y  +K  +    + +A+EL   GIRV
Sbjct: 118 VNASLRFLKEGS--SIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRV 175

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N ++P    T ++    PE    +   +G         +M   E    D A  +++L +D
Sbjct: 176 NGIAP----TTISGDFEPERNWKKLRKLG--------DDMAPPE----DFAKVIIWLLTD 219

Query: 254 EARYISGTNLMVDGG 268
           EA ++ G  + VDGG
Sbjct: 220 EADWVDGVVIPVDGG 234

Length = 238

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 4e-13
 Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 16/198 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            L G+  L+TG ++GIGE+    F + GA V  +A  +D L     +      D     C
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPC 96

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS------EFEKVFDIN 127
           D++  + V + V    ++ G +DI++NNAG S      IR           + E+   +N
Sbjct: 97  DLSDLDAVDALVADVEKRIGGVDILINNAGRS------IRRPLAESLDRWHDVERTMVLN 150

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP--HAYTGSKHAVLGLNKNVAAE 185
                  ++  A  M+ +  G II++ +  G +    P    Y  SK A+  +++ +  E
Sbjct: 151 YYAPLRLIRGLAPGMLERGDGHIINV-ATWGVLSEASPLFSVYNASKAALSAVSRVIETE 209

Query: 186 LGKYGIRVNCVSPYAVAT 203
            G  G+    +    VAT
Sbjct: 210 WGDRGVHSTTLYYPLVAT 227

Length = 293

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 66.8 bits (164), Expect = 4e-13
 Identities = 52/211 (24%), Positives = 79/211 (37%), Gaps = 30/211 (14%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC---- 73
           G+V L+TG   GIG + V      GA    A  +D             P++         
Sbjct: 6   GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD-------------PESVTDLGPRVV 52

Query: 74  ----DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDIN 127
               DVT    V +A +        + I+VNNAGI  +G+    + E D        + N
Sbjct: 53  PLQLDVTDPASVAAAAEAA----SDVTILVNNAGIFRTGSL---LLEGDEDALRAEMETN 105

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
             G     +  A ++     G I+++ SV   +       Y+ SK A   L + + AEL 
Sbjct: 106 YFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELA 165

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTED 218
             G RV  V P  + T +A      +    D
Sbjct: 166 PQGTRVLGVHPGPIDTDMAAGLDAPKASPAD 196

Length = 238

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 66.9 bits (164), Expect = 7e-13
 Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 33/211 (15%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT---FFCHCD 74
           G+V +ITG  +GIG+ T R   K GA V IA   +  G++    +  E           D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVF 132
           ++    V    +  + +F  LDI++NNAGI            L++  FE  F +N  G F
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIM------APPRRLTKDGFELQFAVNYLGHF 114

Query: 133 HGMKHAARIMIPQTKGT----IISICSVAGAIG-------------GLGPH-AYTGSKHA 174
                   +++P  K +    I+++ S+A   G                P+ AY  SK A
Sbjct: 115 L----LTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLA 170

Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGL 205
            +   + +A  L   G+ VN + P  V T L
Sbjct: 171 NILFTRELARRLEGTGVTVNALHPGVVRTEL 201

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 64.6 bits (157), Expect = 8e-13
 Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ---SLGGEPDTFFC 71
           +L G+VA++TGG  GIG +T  L  K GAKV + D+    GQ   +   +LGGE    F 
Sbjct: 13  KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGE--ALFV 70

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI 104
             D+ K+ D    + +T+  F  +D++  NAG+
Sbjct: 71  SYDMEKQGDWQRVISITLNAFSRIDMLFQNAGL 103

Length = 169

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 3e-12
 Identities = 69/250 (27%), Positives = 102/250 (40%), Gaps = 27/250 (10%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
           L+ GG++GIG +  R F   GA+V IA    +      ++LGG         D+T E   
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEA-- 58

Query: 82  CSAVDLTVEKFGTLD-IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
             AVD    + G  D +++  A   G P   +R   L+  +   D      F G    AR
Sbjct: 59  --AVDAFFAEAGPFDHVVITAADTPGGP---VRALPLAAAQAAMDSK----FWGAYRVAR 109

Query: 141 IMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA 200
                  G++  +   A                A+  L + +A EL    +RVN VSP  
Sbjct: 110 AARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPGL 167

Query: 201 VATGLALAHLPEEERTE--DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYI 258
           V T L  + L  + R     A        AR            DVANA+LFLA++   + 
Sbjct: 168 VDTPL-WSKLAGDAREAMFAAAA--ERLPARRVG------QPEDVANAILFLAAN--GFT 216

Query: 259 SGTNLMVDGG 268
           +G+ ++VDGG
Sbjct: 217 TGSTVLVDGG 226

Length = 230

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 64.9 bits (159), Expect = 3e-12
 Identities = 62/270 (22%), Positives = 100/270 (37%), Gaps = 50/270 (18%)

Query: 8   DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVC--------IADVQDNLGQQVC 59
              P    L  R+ L+TG   GIG      + +HGA V         +  V D    ++ 
Sbjct: 2   HYQPKPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYD----EIE 57

Query: 60  QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
            + G +P            ++     D   E+FG LD +++NAG+ G   P + + D   
Sbjct: 58  AAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGP-MEQQDPEV 116

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQT---------KGTIISICSVAGAIGGLGPHAYTG 170
           ++ V  +NV   F         M+ Q            +++   S  G  G     AY  
Sbjct: 117 WQDVMQVNVNATF---------MLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAV 167

Query: 171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN 230
           SK A  G+ + +A E     +RVNC++P    T +  +  P     ED            
Sbjct: 168 SKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFP----GEDPQ---------- 213

Query: 231 ANMQGTELTANDVANAVLFLASDEARYISG 260
                   T  D+    L+L  D++R  +G
Sbjct: 214 -----KLKTPEDIMPLYLYLMGDDSRRKNG 238

Length = 247

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 64.6 bits (158), Expect = 3e-12
 Identities = 72/276 (26%), Positives = 115/276 (41%), Gaps = 41/276 (14%)

Query: 11  PAVQRLVGRVALITGGATG--IGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGE 65
             +  L G+  L+ G A    I     R F   GA++ +  + D     V    + L   
Sbjct: 3   QPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAP 62

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI--READLSE--FE 121
               F   DV +   + +      E++G LD ++++  I+ AP  D+  R  D S   F 
Sbjct: 63  ---IFLPLDVREPGQLEAVFARIAEEWGRLDFLLHS--IAFAPKEDLHGRVVDCSREGFA 117

Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA------IGGLGPHAYTGSKHAV 175
              D++    F  M   A  ++    G+++++ S  GA         +GP      K A+
Sbjct: 118 LAMDVSCHS-FIRMARLAEPLMTN-GGSLLTM-SYYGAEKVVENYNLMGP-----VKAAL 169

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANM 233
               + +AAELG  GIRV+ +SP  + T  A  +     +   EDA        A  A  
Sbjct: 170 ESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDF--DALLEDA--------AERAP- 218

Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
               +  +DV     FLASD AR ++G  L +DGG+
Sbjct: 219 LRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGY 254

Length = 258

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 6e-12
 Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 18/192 (9%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVC-----IADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           V LITG ++GIG +    F   G +V        DV+  L      ++           D
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LAAAGFTAV---------QLD 52

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V     +    +    + G LD+++NNAG  GA  P + +  +    + F+ NV  V  G
Sbjct: 53  VNDGAALARLAEELEAEHGGLDVLINNAGY-GAMGP-LLDGGVEAMRRQFETNVFAVV-G 109

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +  A   ++ +++G +++I SV+G +      AY  SK AV  L+  +  EL  +G++V 
Sbjct: 110 VTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVM 169

Query: 195 CVSPYAVATGLA 206
            V P A+A+  A
Sbjct: 170 EVQPGAIASQFA 181

Length = 274

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 58/249 (23%), Positives = 99/249 (39%), Gaps = 23/249 (9%)

Query: 20  VALITGGATGIGESTVRLFHKHGAK---VCIADVQDNLGQQVCQSLGGEPDTFFCH-CDV 75
           V ++TG + GIG +      K G+    V +A  ++ L +   +   G          D+
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPG--LRVTTVKADL 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF--- 132
           +    V   ++   +  G  D+++NNAG  G P   I   DL E +K FD+N+       
Sbjct: 59  SDAAGVEQLLEAIRKLDGERDLLINNAGSLG-PVSKIEFIDLDELQKYFDLNLTSPVCLT 117

Query: 133 -HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              ++   +      K T++++ S A      G   Y  SK A     + +AAE     +
Sbjct: 118 STLLRAFKK---RGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE--PDV 172

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RV   +P  V T      +  E R   A    R+   R+   +G  L     A  +  L 
Sbjct: 173 RVLSYAPGVVDT-----DMQREIRETSADPETRSRF-RSLKEKGELLDPEQSAEKLANLL 226

Query: 252 SDEARYISG 260
            ++ ++ SG
Sbjct: 227 -EKDKFESG 234

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 2e-11
 Identities = 68/244 (27%), Positives = 100/244 (40%), Gaps = 28/244 (11%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFC 71
            L G V +ITG ++GIG++T   F + GA++ +A   +   Q V   C++LG E      
Sbjct: 4   PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAE--VLVV 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DVT  + V +         G +D+ VNN G+ GA      E  +   E+V   N+ G 
Sbjct: 62  PTDVTDADQVKALATQAASFGGRIDVWVNNVGV-GA-VGRFEETPIEAHEQVIQTNLIGY 119

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY-G 190
                 A  I   Q  G  I++ S+ G        AY+ SK  + G ++ +  EL  +  
Sbjct: 120 MRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPD 179

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVARNANMQGTELTANDVANAV 247
           I V  V P  + T       P          GFR   N+  R             VA AV
Sbjct: 180 IHVCDVYPAFMDT-------P----------GFRHGANYTGRRLTPPPPVYDPRRVAKAV 222

Query: 248 LFLA 251
           + LA
Sbjct: 223 VRLA 226

Length = 330

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 5/192 (2%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L  +  L+TG + GIG++        GA++ +        + +   L       +   D
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVAD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           +T E     AV     + G +++++NNAG++  A   D     +     +  +N+     
Sbjct: 62  LTSEAGR-EAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIER---LLALNLTAPMQ 117

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +    ++  Q    ++++ S  G+IG  G  +Y  SK A+ G ++ +  EL   G+RV
Sbjct: 118 LTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRV 177

Query: 194 NCVSPYAVATGL 205
             ++P A  T +
Sbjct: 178 LYLAPRATRTAM 189

Length = 263

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 71/286 (24%), Positives = 112/286 (39%), Gaps = 71/286 (24%)

Query: 26  GATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCS-- 83
           GA GIG++  R     G KV +AD  +   +   ++L             T+E DV S  
Sbjct: 9   GAGGIGQAIARRV-GAGKKVLLADYNEENLEAAAKTLREAG-----FDVSTQEVDVSSRE 62

Query: 84  ---AVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
              A+  T +  G +  +V+ AG+S   A    I + DL     V +             
Sbjct: 63  SVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLE-----------EF 111

Query: 139 ARIMIPQTKGTIISICSVAG-----------------------AIGGLGP-------HAY 168
            +++ P   G +I+  S +G                       ++  L P       HAY
Sbjct: 112 GKVIAPGGAGVVIA--SQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAY 169

Query: 169 TGSKHAVLGLN-KNVAAE---LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR 224
             +K A    N   V AE    G+ G R+N +SP  ++T LA   L           G+R
Sbjct: 170 QIAKRA----NALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGD-----GYR 220

Query: 225 NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           N  A++    G   T +++A    FL      +I+G++ +VDGG T
Sbjct: 221 NMFAKSPA--GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGAT 264

Length = 275

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 59.7 bits (145), Expect = 2e-10
 Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 50/278 (17%)

Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLG------QQVCQSLGGEPD 67
           L G+ AL+TG A    I     +  H  GA++ I  + D  G      +++ + L   P 
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL--NP- 60

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV------NNAGISGAPCPDIREADLSEFE 121
           + F  CDV  +  +    +   +K+G LDI+V          + G    D        F 
Sbjct: 61  SLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIG----DFSATSREGFA 116

Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-K 180
           +  +I+   +    K A  +M   ++G  I   +  G +  +  +   G   A L  + +
Sbjct: 117 RALEISAYSLAPLCKAAKPLM---SEGGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVR 173

Query: 181 NVAAELGKYGIRVNCVS--------PYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
            +AAELG   IRVN +S          AV   L + H  EE+                A 
Sbjct: 174 YLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEK----------------AP 217

Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           ++ T +T  +V N   FL SD A  I+G  + VD G+ 
Sbjct: 218 LRRT-VTQTEVGNTAAFLLSDLASGITGQTIYVDAGYC 254

Length = 258

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 25/266 (9%)

Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-H 72
           + G+  LI G A    I     +     GA++      D L ++V + L  E   F   H
Sbjct: 8   MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRV-EPLAAELGAFVAGH 66

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKG 130
           CDVT E  + +  +   +K+G LD +V+  G S       R  D S   F    DI+V  
Sbjct: 67  CDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYS 126

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
                + A ++M     G+I+++ +  GA   +  +   G   A L  + K +A +LG  
Sbjct: 127 FTAVAQRAEKLM--TDGGSILTL-TYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLGPK 183

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA---RNANMQGTELTANDVANA 246
            IRVN +S   + T LA + + +          FR  +     NA ++ T +T  +V ++
Sbjct: 184 NIRVNAISAGPIKT-LAASGIGD----------FRYILKWNEYNAPLRRT-VTIEEVGDS 231

Query: 247 VLFLASDEARYISGTNLMVDGGFTSV 272
            L+L SD +R ++G    VD G+  V
Sbjct: 232 ALYLLSDLSRGVTGEVHHVDSGYHVV 257

Length = 272

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 11/191 (5%)

Query: 19  RVALITGGATGIG-ESTVRLFH--KHGAKVCIADVQD-NLGQQVCQSLGGE-PDTF-FCH 72
            V LITG ++GIG    VRL        KV  A ++D     ++ ++ G     T     
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKV-YATMRDLKKKGRLWEAAGALAGGTLETLQ 59

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV   + V +AV+   E    +D++V NAG+ G   P +          VFD+NV G  
Sbjct: 60  LDVCDSKSVAAAVERVTE--RHVDVLVCNAGV-GLLGP-LEALSEDAMASVFDVNVFGTV 115

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             ++     M  +  G I+   SV G  G      Y  SK A+ GL +++A +L  + + 
Sbjct: 116 RMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNVH 175

Query: 193 VNCVSPYAVAT 203
           ++ +    V T
Sbjct: 176 LSLIECGPVHT 186

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 32/247 (12%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDV 75
           R AL+ G ++GIG +T       G  V +   +    +++   +   GGE   F    DV
Sbjct: 11  RPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAF--PLDV 68

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR-----EADLSEFEKVFDINVKG 130
           T  + V S V    E  G ++++V+ AG       D       E    +FE    I++ G
Sbjct: 69  TDPDSVKSFVAQAEEALGEIEVLVSGAG-------DTYFGKLHEISTEQFESQVQIHLVG 121

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGK 188
                      MI + +G +I + S         PH  AY  +K  +  +  N+  EL  
Sbjct: 122 ANRLATAVLPGMIERRRGDLIFVGSDVALRQ--RPHMGAYGAAKAGLEAMVTNLQMELEG 179

Query: 189 YGIRVNCVSPYAVATGLALAHLPE--EERTED-AMVGFRNFVARNANMQGTELTANDVAN 245
            G+R + V P    TG+  +   E      ED A  G     AR+       L A+D+A 
Sbjct: 180 TGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQ----ARHDYF----LRASDLAR 231

Query: 246 AVLFLAS 252
           A+ F+A 
Sbjct: 232 AITFVAE 238

Length = 274

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 58.9 bits (143), Expect = 5e-10
 Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 30/219 (13%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+ A++TGG +G+G  T R   + GA V +   + ++ ++    L G         D+
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREA---LAGIDGVEVVMLDL 80

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              E V +  +  ++    +DI++NNAG+    CP+ R  D   +E  F  N  G F  +
Sbjct: 81  ADLESVRAFAERFLDSGRRIDILINNAGVMA--CPETRVGD--GWEAQFATNHLGHFALV 136

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGL---GPH---------AYTGSKHA----VLGLN 179
                 +       ++++ S       +    PH         AY  SK A     + L+
Sbjct: 137 NLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLD 196

Query: 180 KNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEEERTE 217
           K     LGK  G+R   V P  + T L   HLP EE+  
Sbjct: 197 K-----LGKDQGVRAFSVHPGGILTPLQ-RHLPREEQVA 229

Length = 315

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 57.6 bits (140), Expect = 9e-10
 Identities = 62/266 (23%), Positives = 109/266 (40%), Gaps = 30/266 (11%)

Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGG 64
           SP +     R AL+TG A  IG +       HG  V +      D  + L  ++ ++LG 
Sbjct: 1   SPPMSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEI-RALGR 59

Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF 124
                    D+  E +V + V       G + ++VNNA  S            + +++  
Sbjct: 60  RAVAL--QADLADEAEVRALVARASAALGPITLLVNNA--SLFEYDSAASFTRASWDRHM 115

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNV 182
             N++  F   +  AR +    +G ++++  +   +  L P   +YT SK A+    + +
Sbjct: 116 ATNLRAPFVLAQAFARALPADARGLVVNM--IDQRVWNLNPDFLSYTLSKAALWTATRTL 173

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
           A  L    IRVN     A+  G     LP   ++ +    F    A     +G+     +
Sbjct: 174 AQALAPR-IRVN-----AIGPGPT---LPSGRQSPE---DFARQHAATPLGRGSTP--EE 219

Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           +A AV +L   +A  ++G  + VDGG
Sbjct: 220 IAAAVRYLL--DAPSVTGQMIAVDGG 243

Length = 258

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 29/203 (14%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +  G   LITGGA+GIG +  + F + G  V I    +    +        P+     CD
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN---PEIHTEVCD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD-------IN 127
           V   +     V+   +++  L++++NNAGI        R  DL+  E + D        N
Sbjct: 59  VADRDSRRELVEWLKKEYPNLNVLINNAGI-------QRNEDLTGAEDLLDDAEQEIATN 111

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG--PHA----YTGSKHAVLGLNKN 181
           +             ++ Q + TII++ S      GL   P A    Y  +K A+      
Sbjct: 112 LLAPIRLTALLLPHLLRQPEATIINVSS------GLAFVPMASTPVYCATKAAIHSYTLA 165

Query: 182 VAAELGKYGIRVNCVSPYAVATG 204
           +  +L    + V  ++P  V T 
Sbjct: 166 LREQLKDTSVEVIELAPPLVDTT 188

Length = 245

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 50/257 (19%), Positives = 90/257 (35%), Gaps = 43/257 (16%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
            RV L+ GG   +G + V+ F   G  V   D+ +N        +             + 
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASIDLAENEEADASIIVLD---------SDSF 51

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            E     V       G +D ++  AG  +G       ++ +  ++ ++  N+   F    
Sbjct: 52  TEQAKQVVASVARLSGKVDALICVAGGWAGGSAKS--KSFVKNWDLMWKQNLWTSFIASH 109

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPH----AYTGSKHAVLGLNKNVAAELG--KYG 190
            A + +   + G ++      GA   L P      Y  +K AV  L +++AAE      G
Sbjct: 110 LATKHL--LSGGLLVLT----GAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAG 163

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
              N + P  + T      +P+ + +                   +      +A  +LF 
Sbjct: 164 STANAILPVTLDTPANRKAMPDADFS-------------------SWTPLEFIAELILFW 204

Query: 251 ASDEARYISGTNLMVDG 267
           AS  AR  SG+ + V  
Sbjct: 205 ASGAARPKSGSLIPVVT 221

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 54.5 bits (131), Expect = 6e-09
 Identities = 49/202 (24%), Positives = 77/202 (38%), Gaps = 18/202 (8%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           ALI G   GIG +  R     G ++ ++             L  E        DV  E  
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRD----AGALAGLAAEVGALARPADVAAE-- 54

Query: 81  VCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA 139
               V    ++ G LD++V  AG I G P    + A      ++ D N+ G    +KHA 
Sbjct: 55  --LEVWALAQELGPLDLLVYAAGAILGKPLARTKPAAW---RRILDANLTGAALVLKHAL 109

Query: 140 RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPY 199
            ++    +   +        + GL   AY  +K A+    +    E+   G+R+  V P 
Sbjct: 110 ALLAAGARLVFLGAYPELVMLPGLS--AYAAAKAALEAYVEVARKEV--RGLRLTLVRPP 165

Query: 200 AVATGL--ALAHLPEEERTEDA 219
           AV TGL      LP+   + + 
Sbjct: 166 AVDTGLWAPPGRLPKGALSPED 187

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 54.5 bits (131), Expect = 9e-09
 Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 19/262 (7%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEP-DTFFCHC 73
           L G++A  T  + GIG    R+  + GA V + +  ++NL +   +       D  +   
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD-IREADLSEFEKVFDINVKGVF 132
           D+TK ED+   V   ++  G  DI   +   +G P P    E  + ++E      VK + 
Sbjct: 66  DLTKREDLERTVK-ELKNIGEPDIFFFS---TGGPKPGYFMEMSMEDWEGA----VKLLL 117

Query: 133 HGMKHAARIMIP--QTKGTIISICSVAGAIGGLGPHAYTGS--KHAVLGLNKNVAAELGK 188
           +   +  R ++P  + KG    I S + AI    P+    +  + ++ GL + +A ELG 
Sbjct: 118 YPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGP 177

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMV--GFRNFVARNANMQGTELTANDVANA 246
            GI VN + P  + T   +    +  + E   V    + + A+   + G      ++   
Sbjct: 178 KGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEY-AKPIPL-GRLGEPEEIGYL 235

Query: 247 VLFLASDEARYISGTNLMVDGG 268
           V FLASD   YI+G  + VDGG
Sbjct: 236 VAFLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 62/209 (29%), Positives = 85/209 (40%), Gaps = 39/209 (18%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R  LITG ++GIG    R     G +V  A  +        ++ G E   F    D  + 
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRV-FATCRKEEDVAALEAEGLE--AF--QLDYAEP 59

Query: 79  EDVCSAVDLTVEKF-GTLDIMVNNA--GISGA----PCPDIREADLSEFEKVFDINVKGV 131
           E + + V   +E   G LD + NN   G  GA    P   +R          F+ N    
Sbjct: 60  ESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQ--------FEAN---- 107

Query: 132 FHGMKHAARIMIP----QTKGTIISICSVAGAIGGLGPH----AYTGSKHAVLGLNKNVA 183
           F G     R +IP    Q +G I+  CS   +I GL P     AY  SK A+ GL+  + 
Sbjct: 108 FFGWHDLTRRVIPVMRKQGQGRIVQ-CS---SILGLVPMKYRGAYNASKFAIEGLSLTLR 163

Query: 184 AELGKYGIRVNCVSPYAVATGL---ALAH 209
            EL   GI V+ + P  + T     ALA 
Sbjct: 164 MELQGSGIHVSLIEPGPIETRFRANALAA 192

Length = 277

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 72/272 (26%), Positives = 117/272 (43%), Gaps = 47/272 (17%)

Query: 18  GRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFCH 72
           G+  LI G A    I     +     GA++      + LG++V    +SLG +   F   
Sbjct: 7   GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSD---FVLP 63

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKG 130
           CDV     V +  +   +K+G LD +V+  G S       R AD +   F +   I+   
Sbjct: 64  CDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFS 123

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGLNKN---- 181
                K AA++M     G+++++              Y GS        V+G+ K     
Sbjct: 124 FTEIAKRAAKLM--PDGGSMLTL-------------TYGGSTRVMPNYNVMGVAKAALEA 168

Query: 182 ----VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
               +AA+ G  GIRVN +S   V T LA A +       DA   F ++  RN+ ++ T 
Sbjct: 169 SVRYLAADYGPQGIRVNAISAGPVRT-LAGAGI------GDARAIF-SYQQRNSPLRRT- 219

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           +T ++V  + L+L SD +  ++G    VD G+
Sbjct: 220 VTIDEVGGSALYLLSDLSSGVTGEIHFVDSGY 251

Length = 271

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.0 bits (125), Expect = 7e-08
 Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 61/282 (21%)

Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           L G+  ++ G A    I     R  H  GAK+      + L ++V     +L G+ ++  
Sbjct: 5   LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQ-ESLL 63

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR----EADLSEFEKVFDI 126
             CDVT +E++ +  +   E+ G +  + +   I+ A   D+R    E     F    +I
Sbjct: 64  LPCDVTSDEEITACFETIKEEVGVIHGVAHC--IAFANKEDLRGEFLETSRDGFLLAQNI 121

Query: 127 NVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN------- 179
           +       +   A+ ++ +  G+I+++              Y G +  V   N       
Sbjct: 122 SAYS-LTAVAREAKKLMTE-GGSIVTL-------------TYLGGERVVQNYNVMGVAKA 166

Query: 180 ------KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF------V 227
                 K +A +LGK GIRVN +S   +             RT  A  G   F      +
Sbjct: 167 SLEASVKYLANDLGKDGIRVNAISAGPI-------------RTLSAK-GVGGFNSILKEI 212

Query: 228 ARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
              A ++ T  T  +V +   FL SD +R ++G N+ VD G+
Sbjct: 213 EERAPLRRT-TTQEEVGDTAAFLFSDLSRGVTGENIHVDSGY 253

Length = 257

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.1 bits (125), Expect = 7e-08
 Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 30/199 (15%)

Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG----M 135
           +V   V    + FG +DI+V+    S A  P+I +  L    K +   +    +     +
Sbjct: 108 EVAEQV---KKDFGHIDILVH----SLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL 160

Query: 136 KHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIR 192
            H   IM P   G+ IS+  +A   A+ G G    + +K A+    K +A E G ++GIR
Sbjct: 161 SHFGPIMNPG--GSTISLTYLASMRAVPGYG-GGMSSAKAALESDTKVLAWEAGRRWGIR 217

Query: 193 VNCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           VN +S  P A   G A+  +       + MV   ++    A +    + A  V  A  FL
Sbjct: 218 VNTISAGPLASRAGKAIGFI-------ERMV---DYYQDWAPLP-EPMEAEQVGAAAAFL 266

Query: 251 ASDEARYISGTNLMVDGGF 269
            S  A  I+G  L VD G 
Sbjct: 267 VSPLASAITGETLYVDHGA 285

Length = 299

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 24/193 (12%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
             ALITG + GIG +  R        +      + L  ++   L G    F    D+T  
Sbjct: 4   PTALITGASRGIGAAIARELAPTHTLLLGGRPAERL-DELAAELPGAT-PF--PVDLTDP 59

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           E + +A    VE+ G LD++V+NAG++    P + E+ + E+    ++NV         A
Sbjct: 60  EAIAAA----VEQLGRLDVLVHNAGVA-DLGP-VAESTVDEWRATLEVNVVAP------A 107

Query: 139 A--RIMIPQ---TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV-AAELGKYGIR 192
              R+++P      G ++ I S AG     G  +Y  SK A+  L   +   E G   +R
Sbjct: 108 ELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPGN--VR 165

Query: 193 VNCVSPYAVATGL 205
           V  V P    T +
Sbjct: 166 VTSVHPGRTDTDM 178

Length = 227

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 70/277 (25%), Positives = 113/277 (40%), Gaps = 44/277 (15%)

Query: 16  LVGRVALITGG------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF 69
           L G+  LITG       A GI ++      + GA++    V D L ++V +         
Sbjct: 4   LQGKKILITGMISERSIAYGIAKAC----REQGAELAFTYVVDKLEERVRKMAAELDSEL 59

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-------DLSE--F 120
              CDV  ++++        + +  LD +V++ G   AP    +EA        +S   F
Sbjct: 60  VFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGF--AP----KEALSGDFLDSISREAF 113

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN- 179
               +I+       +  AAR M+      I+++ S  GA+  +  +   G   A L    
Sbjct: 114 NTAHEISAYS-LPALAKAARPMMRGRNSAIVAL-SYLGAVRAIPNYNVMGMAKASLEAGI 171

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVARNANMQGT 236
           +  AA LGK GIR N +S   + T  A             +  F      VA +  ++  
Sbjct: 172 RFTAACLGKEGIRCNGISAGPIKTLAA-----------SGIADFGKLLGHVAAHNPLR-R 219

Query: 237 ELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
            +T  +V N   FL SD +  I+G    VDGG+ S+N
Sbjct: 220 NVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY-SIN 255

Length = 261

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 49.4 bits (118), Expect = 5e-07
 Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 19/203 (9%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP---DTFFCHCD 74
           G+  +ITG  TGIG+ T R   + GA+V +A       ++    +  +    +    H D
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +   + + +     + +   LD+++NNAG+    CP  +  D   FE  F +N  G F  
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAGV--MRCPYSKTED--GFEMQFGVNHLGHFLL 116

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPH------------AYTGSKHAVLGLNKNV 182
                 ++       I+++ S+A   G +               AY  SK A +   + +
Sbjct: 117 TNLLLDLLKKSAPSRIVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSKLANVLFTREL 176

Query: 183 AAELGKYGIRVNCVSPYAVATGL 205
           A  L   G+ VN + P  V T L
Sbjct: 177 ARRLQGTGVTVNALHPGVVRTEL 199

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 8e-07
 Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 25/266 (9%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
           L+T  + GIG +  R   K GA+V I+   +   ++  + L    + +    D++ ++D+
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDL 63

Query: 82  CSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
            + V    E  G +D +V NAG +   PC  + EA  S++ +   +++  V  G  +   
Sbjct: 64  KNLVKEAWELLGGIDALVWNAGNVRCEPCM-LHEAGYSDWLEAALLHL--VAPG--YLTT 118

Query: 141 IMIP-----QTKGTIISICSVAGAIGGLGPHAYTGSKHAVL-GLNKNVAAELGKYGIRVN 194
           ++I      + KG ++ + SV+     + P        A L  L K V+   G  GIR  
Sbjct: 119 LLIQAWLEKKMKGVLVYLSSVS-VKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAY 177

Query: 195 CV------SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            V      +P A      +A    EER       +   V     ++ T     ++ + + 
Sbjct: 178 TVLLGSFDTPGARENLARIA----EERGVSFEETWEREVLERTPLKRTG-RWEELGSLIA 232

Query: 249 FLASDEARYISGTNLMVDGGFT-SVN 273
           FL S+ A Y+ G+ ++ DG  T  VN
Sbjct: 233 FLLSENAEYMLGSTIVFDGAMTRGVN 258

Length = 259

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 46/198 (23%), Positives = 76/198 (38%), Gaps = 19/198 (9%)

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E+     VD  ++  G +D++V+N  I   P   I     ++  + F+      F  ++ 
Sbjct: 56  EQKPEELVDAVLQAGGAIDVLVSNDYIP-RPMNPIDGTSEADIRQAFEALSIFPFALLQA 114

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHA----YTGSKHAVLGLNKNVAAELGKYGIRV 193
           A   M     G+II I S         P A    Y  ++ A + L +++A EL +  I V
Sbjct: 115 AIAQMKKAGGGSIIFITSAVP----KKPLAYNSLYGPARAAAVALAESLAKELSRDNILV 170

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVLFLA 251
             + P    +         E   E      R  V R+  +   G     +++   V FLA
Sbjct: 171 YAIGPNFFNSPTYFPTSDWENNPE-----LRERVKRDVPLGRLGRP---DEMGALVAFLA 222

Query: 252 SDEARYISGTNLMVDGGF 269
           S  A  I+G      GG+
Sbjct: 223 SRRADPITGQFFAFAGGY 240

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 5/91 (5%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG---EPDTFFCHC 73
           GRVA++TG  TG+G  T       GA V +A V++ + G+     +       D      
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLA-VRNLDKGKAAAARITAATPGADVTLQEL 74

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI 104
           D+T    V +A D     +  +D+++NNAG+
Sbjct: 75  DLTSLASVRAAADALRAAYPRIDLLINNAGV 105

Length = 306

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 46/169 (27%), Positives = 64/169 (37%), Gaps = 20/169 (11%)

Query: 95  LDIMVNNAGISGAPCPDIREADL--SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIIS 152
            D++V+NA I      D R  DL  S  E+    NV G    ++ A  +M  +  G  I 
Sbjct: 32  RDVVVHNAAIL----DDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFIL 87

Query: 153 ICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE 212
           I SVAG  G  G   Y  SK A+ GL +  A+E    G+    V+    A G  +A  P 
Sbjct: 88  ISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWA-GSGMAKGPV 146

Query: 213 EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA---SDEARYI 258
                         +  N       +   +VA A+L           YI
Sbjct: 147 APE----------EILGNRRHGVRTMPPEEVARALLNALDRPKAGVCYI 185

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 21/162 (12%)

Query: 18  GRVALITGGATGIGESTVR-LFHKHGAKV--------CIADVQDNLGQQVCQSLGGEPDT 68
           G V L+TGGA GIG +  R L  ++GA++           +          ++LG     
Sbjct: 205 GGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVL- 263

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD--IREADLSEFEKVFDI 126
            +   DVT    V   ++   E++G +D +++ AG+      D  + +    +FE V   
Sbjct: 264 -YISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVL----RDALLAQKTAEDFEAVLAP 318

Query: 127 NVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY 168
            V G+ + +  A      +     +   SV+   GG G   Y
Sbjct: 319 KVDGLLN-LAQALA---DEPLDFFVLFSSVSAFFGGAGQADY 356

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 47.1 bits (112), Expect = 4e-06
 Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 19/139 (13%)

Query: 135 MKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGI 191
           ++H   IM P   G  IS+  +A    I G G    + +K A+    + +A E G KY I
Sbjct: 161 LQHFGPIMNP--GGASISLTYIASERIIPGYG-GGMSSAKAALESDTRVLAFEAGRKYKI 217

Query: 192 RVNCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           RVN +S  P       A+  +       D M+    +   NA +Q  ELTA++V NA  F
Sbjct: 218 RVNTISAGPLGSRAAKAIGFI-------DDMI---EYSYANAPLQ-KELTADEVGNAAAF 266

Query: 250 LASDEARYISGTNLMVDGG 268
           LAS  A  I+G  + VD G
Sbjct: 267 LASPLASAITGATIYVDNG 285

Length = 303

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDT 68
             L G+ AL+TG + GIG  T ++    GA V +     A   + +  ++ ++ GG    
Sbjct: 2   GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI-EAAGGRASA 60

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNA 102
                D+T EE V + +D   E+FG LD +V NA
Sbjct: 61  V--GADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.0 bits (109), Expect = 7e-06
 Identities = 64/266 (24%), Positives = 105/266 (39%), Gaps = 28/266 (10%)

Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPC 63

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKG 130
           DV ++  + +      + +   D  V++ G +     D   +       F+   DI+   
Sbjct: 64  DVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 123

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
            F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G  
Sbjct: 124 -FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 180

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE-----LTANDVA 244
           G+RVN +S   + T               A  G ++F    A+ +        +T  DV 
Sbjct: 181 GVRVNAISAGPIRT--------------LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVG 226

Query: 245 NAVLFLASDEARYISGTNLMVDGGFT 270
           N+  FL SD +  ISG  + VDGGF+
Sbjct: 227 NSAAFLCSDLSAGISGEVVHVDGGFS 252

Length = 262

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 23/201 (11%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH--CDVT 76
           R  +ITG + G+GE+      + G  V      +N   +    L  + ++       D+ 
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN---KELTKLAEQYNSNLTFHSLDLQ 58

Query: 77  KEEDVCS---AVDLTVEKFGTLDI-MVNNAGISGAPCPDIREADLSEFEKVFDIN----- 127
              ++ +    +  ++++     I ++NNAG+  AP   I +A+  E      +N     
Sbjct: 59  DVHELETNFNEILSSIQEDNVSSIHLINNAGMV-APIKPIEKAESEELITNVHLNLLAPM 117

Query: 128 -VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE- 185
            +   F  MKH       +    +I+I S A      G  AY  SK  +    + VA E 
Sbjct: 118 ILTSTF--MKHTKDW---KVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQ 172

Query: 186 -LGKYGIRVNCVSPYAVATGL 205
              +Y +++   SP  + T +
Sbjct: 173 EEEEYPVKIVAFSPGVMDTNM 193

Length = 251

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 51/191 (26%), Positives = 77/191 (40%), Gaps = 16/191 (8%)

Query: 22  LITGGATGIG-ESTVRLF---HKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
            ITG ++G G   T RL     +  A V   D  D+L  +    L      +    DVT 
Sbjct: 6   FITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRL------WVLQLDVTD 59

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAG--ISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              V + VD      G +D++V+NAG  + GA      E   ++  +  D N+ G    +
Sbjct: 60  SAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAA----EELSDAQIRRQIDTNLIGSIQVI 115

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           + A   +  Q  G I+ + S  G I   G   Y  +K  + G  + VA E+  +GI    
Sbjct: 116 RAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTI 175

Query: 196 VSPYAVATGLA 206
           V P    T   
Sbjct: 176 VEPGPARTNFG 186

Length = 276

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 53/190 (27%), Positives = 74/190 (38%), Gaps = 22/190 (11%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIA-----DVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           LITG ++GIG        + G +V  A     DV          SLG          D+ 
Sbjct: 6   LITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR------MNSLGFTGILL----DLD 55

Query: 77  KEEDVCSAVDLTVE-KFGTLDIMVNNAG--ISGAPCPDIREADLSEFEKVFDINVKGVFH 133
             E V  A D  +      L  + NNAG  + G P   I      + E+ F  N  G   
Sbjct: 56  DPESVERAADEVIALTDNRLYGLFNNAGFGVYG-PLSTISRQ---QMEQQFSTNFFGTHQ 111

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
                   M+P  +G I+   SV G I   G  AY  SK+A+   +  +  EL   GI+V
Sbjct: 112 LTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKV 171

Query: 194 NCVSPYAVAT 203
           + + P  + T
Sbjct: 172 SLIEPGPIRT 181

Length = 256

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 62/258 (24%), Positives = 90/258 (34%), Gaps = 72/258 (27%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
            ++ G    IG +  +L   HG +V  A      G+       G+        D+T E  
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITA------GRS-----SGDY-----QVDITDEA- 43

Query: 81  VCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKG------VFH 133
              ++    EK G  D +V+ AG    AP  ++ +AD         +N K       V H
Sbjct: 44  ---SIKALFEKVGHFDAIVSTAGDAEFAPLAELTDADFQ-----RGLNSKLLGQINLVRH 95

Query: 134 GMKHAA-RIMIPQTKGTI----ISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           G+ +      I  T G +    I   + A  + G           A+ G  +  A EL +
Sbjct: 96  GLPYLNDGGSITLTSGILAQRPIPGGAAAATVNG-----------ALEGFVRAAAIELPR 144

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            GIR+N VSP  V   L        E   D   GF              + A DVA A +
Sbjct: 145 -GIRINAVSPGVVEESL--------EAYGDFFPGF------------EPVPAEDVAKAYV 183

Query: 249 FLASDEARYISGTNLMVD 266
                     +G  L VD
Sbjct: 184 RSVEGA---FTGQVLHVD 198

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 59/221 (26%)

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD----IREADLSEFEKVFDINV 128
           CDV  +E +  A     E+ G +D +V+   I+ A   +    + +     +    DI+ 
Sbjct: 62  CDVASDESIERAFATIKERVGKIDGIVH--AIAYAKKEELGGNVTDTSRDGYALAQDISA 119

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGLNK--- 180
             +    K+A  ++ P    +I+++              Y GS+ A     V+G+ K   
Sbjct: 120 YSLIAVAKYARPLLNP--GASIVTL-------------TYFGSERAIPNYNVMGIAKAAL 164

Query: 181 --NV---AAELGKYGIRVNCVSPYAVATGLALAHLPE--------EERTEDAMVGFRNFV 227
             +V   A +LGK GIRVN +S  AV T LA+  +          + RT D         
Sbjct: 165 ESSVRYLARDLGKKGIRVNAISAGAVKT-LAVTGIKGHKDLLKESDSRTVD--------- 214

Query: 228 ARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
                  G  +T  +V N   FL SD +  ++G  + VD G
Sbjct: 215 -------GVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 15/217 (6%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL--GGEPDTFFCHC 73
           L  +  L+TG + G+GE   + +   GA V +        ++V  ++   G P+ F    
Sbjct: 4   LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRF 63

Query: 74  DV-TKEEDVCSAVDLTVEK--FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
           D+ + EE        T+ +   G LD +V+ AG   A  P +    ++E+   + IN   
Sbjct: 64  DLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSP-LDFQTVAEWVNQYRINTVA 122

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG----SKHAVLGLNKNVAAEL 186
                    R + P  K +  +     G   G  P AY G    SK A+  L K  A E 
Sbjct: 123 PM----GLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEW 178

Query: 187 GKYG-IRVNCVSPYAVATGLALAHLPEEERTEDAMVG 222
            ++G +R N + P  + +   +   P E ++E    G
Sbjct: 179 ERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYG 215

Length = 239

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 23/262 (8%)

Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD-TFFCH 72
           L G+  LITG A    I  +  +L  KHGA++      + L ++V + L  E    F   
Sbjct: 6   LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRV-KPLAEEIGCNFVSE 64

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD--LSEFEKVFDINVKG 130
            DVT  + + +  D   EK+G+ D +++    +       R  D  L  F     I+   
Sbjct: 65  LDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYS 124

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAELGKY 189
           +    + A  +M     G+I+++ +  GA   +  +   G +K A+    K +A ++G+ 
Sbjct: 125 LLELSRSAEALM--HDGGSIVTL-TYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGEN 181

Query: 190 GIRVNCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
            IRVN +S  P       A+       ++  A    +    RN        T  DV  A 
Sbjct: 182 NIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLK----RNT-------TQEDVGGAA 230

Query: 248 LFLASDEARYISGTNLMVDGGF 269
           ++L S+ ++ ++G    VD G+
Sbjct: 231 VYLFSELSKGVTGEIHYVDCGY 252

Length = 260

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 2/112 (1%)

Query: 97  IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV 156
           +++NN G+S        E D    + +  +NV+G     +     M+ + KG II+I S 
Sbjct: 135 VLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSG 194

Query: 157 AGAIGGLGP--HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA 206
           A  +    P    Y  +K  +   ++ +  E  K GI V C  P  VAT +A
Sbjct: 195 AAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMA 246

Length = 320

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 58/197 (29%), Positives = 79/197 (40%), Gaps = 32/197 (16%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIA-----DVQDNLGQQVCQSLGGEPDTFFCHCD 74
             LITG  +GIG+     + K G +V IA      V D L  Q   S       F    D
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQV-IACGRNQSVLDELHTQ---SANIFTLAF----D 54

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA--DLSEFEKVFDINVKGVF 132
           VT      +A  L+   F   ++ + NAG     C  + +   D +   +VF++NV GV 
Sbjct: 55  VTDHPGTKAA--LSQLPF-IPELWIFNAG----DCEYMDDGKVDATLMARVFNVNVLGV- 106

Query: 133 HGMKHAARIMIPQT---KGTIISIC-SVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
                A  I   Q     G  + I  S+A  +      AY  SK AV    + +  +L  
Sbjct: 107 -----ANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRP 161

Query: 189 YGIRVNCVSPYAVATGL 205
            GI V  V P  VAT L
Sbjct: 162 KGIEVVTVFPGFVATPL 178

Length = 240

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 43.3 bits (102), Expect = 8e-05
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGGEPDTFFC-HCDVTKE 78
            +ITG ++G+G +  +   + G    +   +D L  +Q  Q +G   D++   HCD+   
Sbjct: 4   VVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDLASL 63

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDINVKGVF 132
           + V   VD        LD +V NA +    A  P    AD   FE    +N  G F
Sbjct: 64  DSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEP-RFTAD--GFELTVGVNHLGHF 116

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 43/161 (26%), Positives = 60/161 (37%), Gaps = 13/161 (8%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           +  LI G + GIG   VR +   G +V IA  +D       Q+LG E        DV   
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWRV-IATARDAAALAALQALGAEALAL----DVADP 56

Query: 79  EDVCS-AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
             V   A  L  E    LD  V  AG+ G     +      +F+ V   NV G    +  
Sbjct: 57  ASVAGLAWKLDGEA---LDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPI 113

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHA---YTGSKHAV 175
               ++    G +  + S  G+IG         Y  SK A+
Sbjct: 114 LLP-LVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAAL 153

Length = 222

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 46/199 (23%), Positives = 71/199 (35%), Gaps = 37/199 (18%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIA--------DVQDNL---GQQVCQSLGGEPDTFF 70
           LI G  + I  +  R +   GA++ +A         + D+L   G     +   +     
Sbjct: 5   LIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTA 64

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR--EADLSEFEKVFDINV 128
            H      + + +  D+ +   GTL               D    EAD +   + F  N 
Sbjct: 65  SHAAF--LDSLPALPDIVLIAVGTL--------------GDQAACEADPALALREFRTNF 108

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL----GLNKNVAA 184
           +G    +   A     +  GTI+ I SVAG  G    + Y  +K A+     GL      
Sbjct: 109 EGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLR----N 164

Query: 185 ELGKYGIRVNCVSPYAVAT 203
            L K G+ V  V P  V T
Sbjct: 165 RLFKSGVHVLTVKPGFVRT 183

Length = 243

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 51/183 (27%), Positives = 75/183 (40%), Gaps = 10/183 (5%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPD--TFFCHCDVTKE 78
           LITG ++G+G    R F   G  + + A   D L +   + L   P         DV   
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIR-EADLSEFEKVFDINVKGVFHGMK 136
           + V        ++ G LD ++ NAGI  GA     +  A+ +  E     N        +
Sbjct: 66  DQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAE----TNFVAALAQCE 121

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
            A  I   Q  G ++ I SV+   G  G   AY  SK  V  L + + AEL K  I+V+ 
Sbjct: 122 AAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVST 181

Query: 196 VSP 198
           + P
Sbjct: 182 IEP 184

Length = 248

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 63/277 (22%), Positives = 121/277 (43%), Gaps = 57/277 (20%)

Query: 18  GRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFCH 72
           G+  LI G A    I     +   + GA++    + + L ++V    Q LG +   +   
Sbjct: 5   GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD---YVYE 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF----EKVFDINV 128
            DV+K E   S  +   +  G +D +V++  ++ AP    +EA    F    ++ F+I  
Sbjct: 62  LDVSKPEHFKSLAESLKKDLGKIDFIVHS--VAFAP----KEALEGSFLETSKEAFNI-- 113

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS-----KHAVLGLNKN-- 181
                 M+ +   +I  T+  ++ + +   ++  L   +Y G       + V+G+ K   
Sbjct: 114 -----AMEISVYSLIELTR-ALLPLLNDGASVLTL---SYLGGVKYVPHYNVMGVAKAAL 164

Query: 182 ------VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVARNAN 232
                 +A +LGK GIRVN +S   + T LA + + +          FR    +   NA 
Sbjct: 165 ESSVRYLAVDLGKKGIRVNAISAGPIKT-LAASGIGD----------FRMILKWNEINAP 213

Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           ++   ++  +V N+ ++L SD +  ++G    VD G+
Sbjct: 214 LK-KNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGY 249

Length = 274

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 18/104 (17%)

Query: 171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-----AMVGFRN 225
           +K A+   N+ +A +LG  GIRVN V+   + T LA   +P  E  E+     A +G+  
Sbjct: 161 AKAALESTNRYLARDLGPRGIRVNLVAAGPIRT-LAAKAIPGFELLEEGWDERAPLGW-- 217

Query: 226 FVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
                 +++        VA AV+ L SD     +G  + VDGG 
Sbjct: 218 ------DVKDPT----PVARAVVALLSDWFPATTGEIVHVDGGA 251

Length = 256

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 26/181 (14%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R ALI G + G+G   V    + G +V  A V+        Q+L G       H +   +
Sbjct: 2   RTALIIGASRGLGLGLVDRLLERGWQV-TATVRGPQQDTALQALPG------VHIE-KLD 53

Query: 79  EDVCSAVDLTVEKFG--TLDIMVNNAGISGAPCPDIREADLSEFEKVF------DINVKG 130
            +  +++D  +++      D++  NAGISG       +A  +E  ++F       I +  
Sbjct: 54  MNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLAR 113

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIG-GLGPHA--YTGSKHAVLGLNKNVAAELG 187
              G        +   +G +  + S  G++    G     Y  SK A+  + ++  AELG
Sbjct: 114 RLLG-------QVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELG 166

Query: 188 K 188
           +
Sbjct: 167 E 167

Length = 225

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 40.7 bits (95), Expect = 5e-04
 Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC---D 74
           G+V +ITG  +GIG  T R F  HGA V +A    +        +  E           D
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           +     V    +    K   L ++V NA +   P     +      E  F +N  G F+
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDG----LETTFQVNHLGHFY 115

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 9/91 (9%)

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           +A  LG  GIR N +S   + T LA + + +  +  D       FV  NA ++   +T  
Sbjct: 173 LAVSLGPKGIRANGISAGPIKT-LAASGIKDFGKILD-------FVESNAPLR-RNVTIE 223

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFTSV 272
           +V N   FL SD A  ++G    VD GF +V
Sbjct: 224 EVGNVAAFLLSDLASGVTGEITHVDSGFNAV 254

Length = 260

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 37.6 bits (87), Expect = 0.004
 Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKV---CIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           GR  LITG  +GIG++      K G  V   C    +    ++  ++  G  + F    D
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPC-PDIREADLSEFEKVFDINVKGVF 132
           ++  + V   V+   E+   L +++NNAG     C  + RE      EK F  N  G +
Sbjct: 61  MSDPKQVWEFVEEFKEEGKKLHVLINNAG-----CMVNKRELTEDGLEKNFATNTLGTY 114

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	280
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK08177	225	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.98
PRK08264	238	short chain dehydrogenase; Validated	99.98
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.96
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.94
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.92
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.91
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.91
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.91
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.9
PLN03209	576	translocon at the inner envelope of chloroplast su	99.9
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.88
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.87
PLN02572	442	UDP-sulfoquinovose synthase	99.87
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.87
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.86
PLN02653	340	GDP-mannose 4,6-dehydratase	99.86
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.85
PLN00198	338	anthocyanidin reductase; Provisional	99.85
PLN02650	351	dihydroflavonol-4-reductase	99.85
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.85
PRK06720	169	hypothetical protein; Provisional	99.84
PLN02583	297	cinnamoyl-CoA reductase	99.84
PLN02214	342	cinnamoyl-CoA reductase	99.84
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.83
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.82
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.82
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.82
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.81
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.81
PLN02240	352	UDP-glucose 4-epimerase	99.81
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.8
PLN02686	367	cinnamoyl-CoA reductase	99.79
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.78
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.78
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.77
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.77
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.76
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.76
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.76
PLN02427	386	UDP-apiose/xylose synthase	99.76
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.75
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.73
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.73
PLN02260	668	probable rhamnose biosynthetic enzyme	99.71
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.69
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.69
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.69
PLN02206	442	UDP-glucuronate decarboxylase	99.68
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.67
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.66
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.65
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.64
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.64
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.63
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.61
CHL00194	317	ycf39 Ycf39; Provisional	99.59
PLN02996	491	fatty acyl-CoA reductase	99.57
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.55
PRK07201	657	short chain dehydrogenase; Provisional	99.53
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.53
PRK05865	854	hypothetical protein; Provisional	99.51
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.5
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.45
PLN02778	298	3,5-epimerase/4-reductase	99.44
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.43
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.42
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.41
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.4
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.39
PRK08309	177	short chain dehydrogenase; Provisional	99.38
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.37
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.33
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.29
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.25
PLN02503	605	fatty acyl-CoA reductase 2	99.25
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.25
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.24
PLN02260	668	probable rhamnose biosynthetic enzyme	99.22
PLN00016	378	RNA-binding protein; Provisional	99.21
PRK12320	699	hypothetical protein; Provisional	99.17
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.12
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.06
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.04
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.91
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.87
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.79
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.78
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.75
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.71
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.66
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.63
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.6
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.58
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.58
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.53
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.49
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.34
COG2910	211	Putative NADH-flavin reductase [General function p	98.26
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.21
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.18
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.09
PRK09620	229	hypothetical protein; Provisional	98.09
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.08
PRK14982	340	acyl-ACP reductase; Provisional	97.97
PLN00106	323	malate dehydrogenase	97.96
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.81
PTZ00325	321	malate dehydrogenase; Provisional	97.81
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.79
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.76
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.76
KOG2774	366	consensus NAD dependent epimerase [General functio	97.74
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.67
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.64
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.63
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.63
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.61
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.57
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.5
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.48
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.43
PRK06849	389	hypothetical protein; Provisional	97.42
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.39
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.36
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.33
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.25
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.23
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.2
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.16
PRK05086	312	malate dehydrogenase; Provisional	97.15
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.14
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.13
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.11
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.09
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.06
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.05
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.02
KOG4288	283	consensus Predicted oxidoreductase [General functi	97.02
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.02
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.99
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.99
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.99
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.98
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.98
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.95
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.95
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.94
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.93
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.9
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.86
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.85
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.84
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.82
COG3268	382	Uncharacterized conserved protein [Function unknow	96.81
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.8
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.8
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.8
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.8
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.76
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.76
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.71
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.7
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.67
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.63
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.62
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.62
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.62
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.61
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.58
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.56
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.55
PRK14968	188	putative methyltransferase; Provisional	96.53
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.52
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.52
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.52
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.46
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.46
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.46
PLN02928	347	oxidoreductase family protein	96.45
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.42
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.42
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.36
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.33
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.33
PLN00203	519	glutamyl-tRNA reductase	96.32
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.31
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.31
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.31
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.3
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.29
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.29
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.28
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.26
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.25
PRK04148	134	hypothetical protein; Provisional	96.25
PRK09496	453	trkA potassium transporter peripheral membrane com	96.24
PLN02178	375	cinnamyl-alcohol dehydrogenase	96.23
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.18
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.14
PLN02494	477	adenosylhomocysteinase	96.13
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.11
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.1
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.07
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.04
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.03
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.02
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.01
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.96
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.95
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.93
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.92
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.92
PRK07574	385	formate dehydrogenase; Provisional	95.9
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.89
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.87
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.79
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.79
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.77
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.77
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.76
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.76
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.75
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.75
PRK06932	314	glycerate dehydrogenase; Provisional	95.74
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.74
PRK13243	333	glyoxylate reductase; Reviewed	95.73
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	95.73
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	95.73
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.67
PRK12480	330	D-lactate dehydrogenase; Provisional	95.66
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.66
PLN02514	357	cinnamyl-alcohol dehydrogenase	95.66
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.65
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.65
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.65
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	95.64
PTZ00117	319	malate dehydrogenase; Provisional	95.61
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.61
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.59
PRK09496	453	trkA potassium transporter peripheral membrane com	95.58
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.58
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.55
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.52
PLN02827	378	Alcohol dehydrogenase-like	95.51
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	95.47
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.47
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.47
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.44
PRK06487	317	glycerate dehydrogenase; Provisional	95.44
PRK08223	287	hypothetical protein; Validated	95.43
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.42
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	95.41
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.4
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.4
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.37
PLN02740	381	Alcohol dehydrogenase-like	95.35
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.31
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.29
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.29
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.28
PRK08328	231	hypothetical protein; Provisional	95.26
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.24
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.24
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.19
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.17
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.17
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.16
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.14
PRK08655	437	prephenate dehydrogenase; Provisional	95.14
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.14
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.14
PTZ00354	334	alcohol dehydrogenase; Provisional	95.12
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.12
PRK14967	223	putative methyltransferase; Provisional	95.11
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.09
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.07
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.06
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.04
PLN03139	386	formate dehydrogenase; Provisional	95.04
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	94.98
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.94
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.94
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	94.94
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.93
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	94.92
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	94.92
PLN00112	444	malate dehydrogenase (NADP); Provisional	94.91
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	94.85
PRK07877	722	hypothetical protein; Provisional	94.84
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.82
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.8
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.78

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=1.4e-49  Score=309.23  Aligned_cols=246  Identities=37%  Similarity=0.554  Sum_probs=222.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ...++.|+++||||++|||+++++.|+++|++|++.+++.+..++....+...+....+.||++++++++.++++..+.+
T Consensus         9 ~~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen    9 VQRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HHHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc
Confidence            34578999999999999999999999999999999999999888888888876777888999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC--CCceEEEEccccccccCCCCccchh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ--TKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      |+++++|||||+..+  ..+-.++.++|+..+.+|+.+.|+++|++.+.|...  ...+||++||+-|..+..++..|++
T Consensus        89 g~psvlVncAGItrD--~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAA  166 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRD--GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAA  166 (256)
T ss_pred             CCCcEEEEcCccccc--cceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhh
Confidence            999999999999987  788889999999999999999999999999985433  3459999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|+++.+|+++.|+|++.+|||||+|+||++.|||+....++-          ...... ..|.++++++||+|++++||
T Consensus       167 sK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v----------~~ki~~-~iPmgr~G~~EevA~~V~fL  235 (256)
T KOG1200|consen  167 SKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKV----------LDKILG-MIPMGRLGEAEEVANLVLFL  235 (256)
T ss_pred             hcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHH----------HHHHHc-cCCccccCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999988765532          111122 33459999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCccc
Q 023553          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+.+.|+||+.+.+|||+.+
T Consensus       236 AS~~ssYiTG~t~evtGGl~m  256 (256)
T KOG1200|consen  236 ASDASSYITGTTLEVTGGLAM  256 (256)
T ss_pred             hccccccccceeEEEeccccC
Confidence            999999999999999999864

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.1e-46  Score=325.12  Aligned_cols=268  Identities=79%  Similarity=1.268  Sum_probs=228.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+..++..+.+....++.++++|++|++++.++++.+.+.+
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            34578999999999999999999999999999999999987777776666544568889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||.......++.+.+.++|++++++|+.++++++++++|.|.+++.|+|++++|..+..+.++...|++||
T Consensus        93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  172 (280)
T PLN02253         93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSK  172 (280)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHH
Confidence            99999999999865432567889999999999999999999999999999877789999999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|++++++.++.|++++||+|++++||+++|++.....+.+.........+..+..+..++.++..+|+|+|+++++|++
T Consensus       173 ~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s  252 (280)
T PLN02253        173 HAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLAS  252 (280)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999865544332211111111222222223333667899999999999999


Q ss_pred             CCCCceeecEEEeCCCcccccCcccccC
Q 023553          253 DEARYISGTNLMVDGGFTSVNHSLRVFR  280 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~~~~~~~~~  280 (280)
                      +...+++|+++.+|||+...+++++|||
T Consensus       253 ~~~~~i~G~~i~vdgG~~~~~~~~~~~~  280 (280)
T PLN02253        253 DEARYISGLNLMIDGGFTCTNHSLRVFR  280 (280)
T ss_pred             cccccccCcEEEECCchhhccchheecC
Confidence            8889999999999999999999999997

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-47  Score=324.21  Aligned_cols=254  Identities=23%  Similarity=0.273  Sum_probs=215.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++++|+++||||++|||+++|+.|+++|++|++++|+.+.+++..+.+..  ..++.++.+|+++++++.++++++. .
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence            468899999999999999999999999999999999998887777666532  2467889999999999999999986 5


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +|++|++|||||....  .++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||.++..+.++...|+++
T Consensus        83 ~g~iD~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~as  160 (263)
T PRK08339         83 IGEPDIFFFSTGGPKP--GYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVV  160 (263)
T ss_pred             hCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHH
Confidence            8999999999998654  67889999999999999999999999999999988878999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh--hhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      |+|+++|+++++.|++++|||||+|+||+++|++..........  .....+....+ .+. .+.+++.+|+|+|++++|
T Consensus       161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~p~~r~~~p~dva~~v~f  238 (263)
T PRK08339        161 RISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEY-AKP-IPLGRLGEPEEIGYLVAF  238 (263)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHH-hcc-CCcccCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999986432110000  00000111111 222 345899999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccc
Q 023553          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+++...++||+++.+|||+...
T Consensus       239 L~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        239 LASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HhcchhcCccCceEEECCCcccc
Confidence            99998999999999999998653

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.3e-46  Score=304.32  Aligned_cols=229  Identities=34%  Similarity=0.499  Sum_probs=205.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+++|+++|||||+|||.++|+.|+++|++|++++|+.+.++++++++.. +.+.++..|++|.+++..+++.+.+.|++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-~~~~~~~~DVtD~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-GAALALALDVTDRAAVEAAIEALPEEFGR   81 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-CceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence            46789999999999999999999999999999999999999999999876 67889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|+||||||....  .++.+.+.++|++++++|+.|.++.+++++|.|.+++.|.||++||++|..+.++...|+++|++
T Consensus        82 iDiLvNNAGl~~g--~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~a  159 (246)
T COG4221          82 IDILVNNAGLALG--DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAA  159 (246)
T ss_pred             ccEEEecCCCCcC--ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHH
Confidence            9999999999866  88999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +..|++.|+.|+..++|||..|.||.+.|+........++..     ......+.     ....+|+|+|+.++|.++..
T Consensus       160 V~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~-----~~~~~y~~-----~~~l~p~dIA~~V~~~~~~P  229 (246)
T COG4221         160 VRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDE-----RADKVYKG-----GTALTPEDIAEAVLFAATQP  229 (246)
T ss_pred             HHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhh-----hHHHHhcc-----CCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999777655544432221     12222222     56789999999999999865


Q ss_pred             CC
Q 023553          255 AR  256 (280)
Q Consensus       255 ~~  256 (280)
                      .+
T Consensus       230 ~~  231 (246)
T COG4221         230 QH  231 (246)
T ss_pred             Cc
Confidence            44

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.2e-46  Score=320.06  Aligned_cols=248  Identities=23%  Similarity=0.284  Sum_probs=205.3

Q ss_pred             ccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++|++|||||++  |||+++|+.|+++|++|++++|+.+..+...+.....+...+++||++|++++.++++++.+++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            46899999999996  9999999999999999999998754333222221111223568999999999999999999999


Q ss_pred             CCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           93 GTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        93 g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      |++|++|||||+....  ..++.+.+.++|++++++|+.++++++++++|+|.+  .|+||+++|..+..+.+++..|++
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~a  161 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGV  161 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhhh
Confidence            9999999999986421  146778999999999999999999999999999963  489999999999988899999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+.+|+++|+.|++++|||||+|+||+++|++...... ..       ....+..+. .+.+++.+|+|+|++++||
T Consensus       162 sKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~-~~-------~~~~~~~~~-~p~~r~~~peeva~~~~fL  232 (271)
T PRK06505        162 AKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGD-AR-------AIFSYQQRN-SPLRRTVTIDEVGGSALYL  232 (271)
T ss_pred             hHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcc-hH-------HHHHHHhhc-CCccccCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998543211 10       011111222 2348899999999999999


Q ss_pred             cCCCCCceeecEEEeCCCccccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      +++...++||+++.+|||+....
T Consensus       233 ~s~~~~~itG~~i~vdgG~~~~~  255 (271)
T PRK06505        233 LSDLSSGVTGEIHFVDSGYNIVS  255 (271)
T ss_pred             hCccccccCceEEeecCCcccCC
Confidence            99989999999999999987544

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.2e-46  Score=316.39  Aligned_cols=247  Identities=21%  Similarity=0.271  Sum_probs=208.7

Q ss_pred             cccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      |+..+++|+++||||+  +|||+++|++|+++|++|++++|+. ..++..+++.. ..+.+++||+++++++.++++++.
T Consensus         1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~   78 (252)
T PRK06079          1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVD-EEDLLVECDVASDESIERAFATIK   78 (252)
T ss_pred             CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhcc-CceeEEeCCCCCHHHHHHHHHHHH
Confidence            3455789999999999  8999999999999999999999984 33333344432 357788999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023553           90 EKFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~  167 (280)
                      ++++++|++|||||+....  ..++.+.+.++|++.+++|+.+++.+++.++|.|.+  .|+||+++|..+..+.+++..
T Consensus        79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~  156 (252)
T PRK06079         79 ERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNV  156 (252)
T ss_pred             HHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchh
Confidence            9999999999999986431  256788999999999999999999999999999953  589999999999988899999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.......++.       ...+ .+ ..+.+++.+|+|+|+++
T Consensus       157 Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~-------~~~~-~~-~~p~~r~~~pedva~~~  227 (252)
T PRK06079        157 MGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDL-------LKES-DS-RTVDGVGVTIEEVGNTA  227 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHH-------HHHH-Hh-cCcccCCCCHHHHHHHH
Confidence            999999999999999999999999999999999999986443211110       1111 12 22348999999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCccc
Q 023553          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .||+++...+++|+++.+|||+..
T Consensus       228 ~~l~s~~~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        228 AFLLSDLSTGVTGDIIYVDKGVHL  251 (252)
T ss_pred             HHHhCcccccccccEEEeCCceec
Confidence            999999999999999999999754

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-45  Score=315.10  Aligned_cols=252  Identities=30%  Similarity=0.459  Sum_probs=217.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++..   ..++.++.||+++++++.++++++.+
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998888777766643   35678899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.++..+|++
T Consensus        83 ~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  160 (260)
T PRK07063         83 AFGPLDVLVNNAGINVF--ADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPV  160 (260)
T ss_pred             HhCCCcEEEECCCcCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHH
Confidence            99999999999998654  5567789999999999999999999999999998777799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++...........+.    ........ .+.+++.+|+|+|++++||
T Consensus       161 sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~----~~~~~~~~-~~~~r~~~~~~va~~~~fl  235 (260)
T PRK07063        161 AKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAA----ARAETLAL-QPMKRIGRPEEVAMTAVFL  235 (260)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHH----HHHHHHhc-CCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999986543221111000    01111122 3348999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...++||+++.+|||+...
T Consensus       236 ~s~~~~~itG~~i~vdgg~~~~  257 (260)
T PRK07063        236 ASDEAPFINATCITIDGGRSVL  257 (260)
T ss_pred             cCccccccCCcEEEECCCeeee
Confidence            9998999999999999998653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-45  Score=317.02  Aligned_cols=248  Identities=20%  Similarity=0.255  Sum_probs=205.6

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcc---hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDN---LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        15 ~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+++|+++||||+  +|||+++|+.|+++|++|++++|+.+   .+++..+++.  .. .++.||++|++++.++++++.
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~--~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG--SD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC--Cc-eEEEecCCCHHHHHHHHHHHH
Confidence            3579999999997  89999999999999999999999853   2333333332  23 568899999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023553           90 EKFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~  167 (280)
                      +.+|++|++|||||+....  ..++.+.+.++|++++++|+.+++++++.++|.|.+  .|+||++||..+..+.+++..
T Consensus        79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~  156 (274)
T PRK08415         79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNV  156 (274)
T ss_pred             HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchh
Confidence            9999999999999985321  256788999999999999999999999999999954  489999999999988889999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |++||+|+.+|+++|+.|++++||+||+|+||+++|++..... ....       ...+.... .+.+++.+|+|+|+++
T Consensus       157 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~-~~~~-------~~~~~~~~-~pl~r~~~pedva~~v  227 (274)
T PRK08415        157 MGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIG-DFRM-------ILKWNEIN-APLKKNVSIEEVGNSG  227 (274)
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccc-hhhH-------Hhhhhhhh-CchhccCCHHHHHHHH
Confidence            9999999999999999999999999999999999998754321 1000       11111112 2348899999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCcccccCccc
Q 023553          248 LFLASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      +||+++...++||+.+.+|||+.. .+.++
T Consensus       228 ~fL~s~~~~~itG~~i~vdGG~~~-~~~~~  256 (274)
T PRK08415        228 MYLLSDLSSGVTGEIHYVDAGYNI-MGMGA  256 (274)
T ss_pred             HHHhhhhhhcccccEEEEcCcccc-cCCCc
Confidence            999998889999999999999875 34443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-45  Score=310.61  Aligned_cols=244  Identities=33%  Similarity=0.476  Sum_probs=208.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++|+++||||++|||+++|++|+++|++|++++|+... ..+..+.  ...++.++.+|+++++++.++++++.+.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEA--LGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH--cCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999886432 2222222  13467889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||..+..+.++...|++|
T Consensus        82 g~iD~lv~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~as  159 (251)
T PRK12481         82 GHIDILINNAGIIRR--QDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTAS  159 (251)
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHH
Confidence            999999999998755  6788899999999999999999999999999997654 5899999999999998889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++|+++++.|++++||+||+|+||+++|++..........       ..... . ..+.+++.+|+|+|+++.||+
T Consensus       160 K~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~-------~~~~~-~-~~p~~~~~~peeva~~~~~L~  230 (251)
T PRK12481        160 KSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTAR-------NEAIL-E-RIPASRWGTPDDLAGPAIFLS  230 (251)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHH-------HHHHH-h-cCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999986543221110       11111 1 223588999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcc
Q 023553          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++...+++|+++.+|||+.
T Consensus       231 s~~~~~~~G~~i~vdgg~~  249 (251)
T PRK12481        231 SSASDYVTGYTLAVDGGWL  249 (251)
T ss_pred             CccccCcCCceEEECCCEe
Confidence            9989999999999999974

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-45  Score=313.38  Aligned_cols=257  Identities=24%  Similarity=0.346  Sum_probs=217.8

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +..++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+.+..   ..++.++.+|+++++++.++++++
T Consensus         2 ~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T PRK07062          2 MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV   81 (265)
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998877776655532   246778899999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .+.++++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++...|
T Consensus        82 ~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  159 (265)
T PRK07062         82 EARFGGVDMLVNNAGQGRV--STFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVAT  159 (265)
T ss_pred             HHhcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHh
Confidence            9999999999999998754  67888999999999999999999999999999988778999999999999998999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcc-hhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE-ERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      +++|+|+.+|+++++.|++++||+|++|+||+++|++....+... ............+......+.+++.+|+|+|+++
T Consensus       160 ~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~  239 (265)
T PRK07062        160 SAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARAL  239 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Confidence            999999999999999999999999999999999999865432210 0000000111111112233458999999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCcc
Q 023553          248 LFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+++...++||+++.+|||+.
T Consensus       240 ~~L~s~~~~~~tG~~i~vdgg~~  262 (265)
T PRK07062        240 FFLASPLSSYTTGSHIDVSGGFA  262 (265)
T ss_pred             HHHhCchhcccccceEEEcCceE
Confidence            99999888899999999999964

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=4.2e-45  Score=311.25  Aligned_cols=259  Identities=42%  Similarity=0.601  Sum_probs=219.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC----CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ...|.||+++|||+++|||+++|+.|+++|++|++++|+.+.+++....+..    ...+..+.||++++++++++++..
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999988877766543    246888999999999999999999


Q ss_pred             HHH-hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhh-HHHHHHHHHHhcccCCCceEEEEccccccccCCCC-
Q 023553           89 VEK-FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG-VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP-  165 (280)
Q Consensus        89 ~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~-  165 (280)
                      .++ +|++|++|||||..... .++.+.+.++|++++++|+.| .+.+.+.+.+.+.++++|.|+++||..+..+.++. 
T Consensus        83 ~~~~~GkidiLvnnag~~~~~-~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~  161 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLT-GSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG  161 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCC-CChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc
Confidence            998 69999999999998763 379999999999999999995 66777777777777788999999999999886666 


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHH-HhhhccCCCCCCCHHHHH
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF-VARNANMQGTELTANDVA  244 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva  244 (280)
                      ..|+++|+|+++|+|++|.||+++|||||+|+||.+.|++..........     ..+.+. ..+...+.+++..|+|++
T Consensus       162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~-----~~~~~~~~~~~~~p~gr~g~~~eva  236 (270)
T KOG0725|consen  162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEM-----EEFKEATDSKGAVPLGRVGTPEEVA  236 (270)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchh-----hHHhhhhccccccccCCccCHHHHH
Confidence            79999999999999999999999999999999999999982211111100     011111 012333569999999999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCCcccccCccc
Q 023553          245 NAVLFLASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      +.+.||+++++.|++|+.+.+|||++..++++.
T Consensus       237 ~~~~fla~~~asyitG~~i~vdgG~~~~~~~~~  269 (270)
T KOG0725|consen  237 EAAAFLASDDASYITGQTIIVDGGFTVVGPSLA  269 (270)
T ss_pred             HhHHhhcCcccccccCCEEEEeCCEEeeccccC
Confidence            999999999877999999999999999888764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.1e-45  Score=311.15  Aligned_cols=248  Identities=22%  Similarity=0.269  Sum_probs=204.0

Q ss_pred             ccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++||+++||||++  |||+++|+.|+++|++|++++|+.. .++..+++... +...++.||++|++++.++++++.++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~-~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV-LEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH-HHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            35799999999997  9999999999999999999988742 22223333211 22345789999999999999999999


Q ss_pred             hCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           92 FGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +|++|++|||||+....  ..++.+.+.++|++++++|+.+++.+++.++|.|.+  .|+||++||..+..+.+++..|+
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~  161 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMG  161 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchh
Confidence            99999999999975421  146778999999999999999999999999999953  58999999999998888999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|+++|+.|++++||+||+|+||+++|++.... ....  +    ....+ ... .+.+++.+|+|+|++++|
T Consensus       162 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~~--~----~~~~~-~~~-~p~~r~~~pedva~~~~~  232 (260)
T PRK06603        162 VAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAI-GDFS--T----MLKSH-AAT-APLKRNTTQEDVGGAAVY  232 (260)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcC-CCcH--H----HHHHH-Hhc-CCcCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999975432 1100  0    01111 112 234889999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccccCc
Q 023553          250 LASDEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      |+++.+.++||+++.+|||+.. .+|
T Consensus       233 L~s~~~~~itG~~i~vdgG~~~-~~~  257 (260)
T PRK06603        233 LFSELSKGVTGEIHYVDCGYNI-MGS  257 (260)
T ss_pred             HhCcccccCcceEEEeCCcccc-cCc
Confidence            9999899999999999999765 444

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=5.1e-45  Score=311.32  Aligned_cols=249  Identities=25%  Similarity=0.318  Sum_probs=207.2

Q ss_pred             cccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcc--hHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDN--LGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        14 ~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +++++|+++||||+  +|||+++|++|+++|++|++++|+.+  ..++..+++... ..+.++.+|++|++++.++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            35789999999986  89999999999999999998876543  223333333222 34667899999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           89 VEKFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                      .+.+|++|++|||||+...  ...++.+.+.++|++++++|+.+++.++++++|.|.+  .|+||++||..+..+.++..
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~  159 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYN  159 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccc
Confidence            9999999999999998642  1156788999999999999999999999999999964  48999999999999989999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+|+.+|+++|+.|++++||+||+|+||+++|++........+.        ....... .+.+++.+|+|++++
T Consensus       160 ~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~--------~~~~~~~-~p~~r~~~~~dva~~  230 (258)
T PRK07370        160 VMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDM--------IHHVEEK-APLRRTVTQTEVGNT  230 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhh--------hhhhhhc-CCcCcCCCHHHHHHH
Confidence            9999999999999999999999999999999999999976432111110        0111112 234899999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCccccc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      +.||+++...++||+.+.+|||+..++
T Consensus       231 ~~fl~s~~~~~~tG~~i~vdgg~~~~~  257 (258)
T PRK07370        231 AAFLLSDLASGITGQTIYVDAGYCIMG  257 (258)
T ss_pred             HHHHhChhhccccCcEEEECCcccccC
Confidence            999999989999999999999988765

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.4e-45  Score=309.99  Aligned_cols=245  Identities=22%  Similarity=0.312  Sum_probs=205.5

Q ss_pred             cccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchH---HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLG---QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        14 ~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|+.+..   ++..+++   ....++.||+++++++.++++.+
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL---DAPIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh---ccceEEecCcCCHHHHHHHHHHH
Confidence            45789999999998  5999999999999999999999986432   3333332   23567899999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           89 VEKFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                      .+++|++|++|||||+....  ..++.+.+.++|++++++|+.+++++++.++|.|++  .|+||++||..+..+.+++.
T Consensus        83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~  160 (258)
T PRK07533         83 AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYN  160 (258)
T ss_pred             HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccch
Confidence            99999999999999986421  146778999999999999999999999999999953  58999999999988888899


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+|+.+|+++|+.|++++||+||+|+||+++|++.......+.       ....+.. . .+.+++.+|+|+|++
T Consensus       161 ~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~-------~~~~~~~-~-~p~~r~~~p~dva~~  231 (258)
T PRK07533        161 LMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDA-------LLEDAAE-R-APLRRLVDIDDVGAV  231 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHH-------HHHHHHh-c-CCcCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999998654321110       0111212 2 234889999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCcccc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++||+++...+++|+.+.+|||+...
T Consensus       232 ~~~L~s~~~~~itG~~i~vdgg~~~~  257 (258)
T PRK07533        232 AAFLASDAARRLTGNTLYIDGGYHIV  257 (258)
T ss_pred             HHHHhChhhccccCcEEeeCCccccc
Confidence            99999988899999999999998654

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-44  Score=307.83  Aligned_cols=249  Identities=35%  Similarity=0.503  Sum_probs=215.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+.. ..++.++.||+++++++.++++++.+.+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            357899999999999999999999999999999999998888777666643 2468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-~~~~~~~~Y~~s  171 (280)
                      +++|++|||||+.... .++.+.+.++|++++++|+.+++.+++.++|.|++++.++||++||..+. .+.+++..|++|
T Consensus        82 ~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~s  160 (254)
T PRK07478         82 GGLDIAFNNAGTLGEM-GPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAAS  160 (254)
T ss_pred             CCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHH
Confidence            9999999999986432 56778999999999999999999999999999988888999999999886 567888999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|++.++++++.|+.++||+|++|+||+++|++.+.......        ...+..... +.+++.+|+|+|+.+++|+
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~~~va~~~~~l~  231 (254)
T PRK07478        161 KAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPE--------ALAFVAGLH-ALKRMAQPEEIAQAALFLA  231 (254)
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHH--------HHHHHHhcC-CCCCCcCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999998754322111        112222222 3488999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcccc
Q 023553          252 SDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++...+++|+++.+|||+...
T Consensus       232 s~~~~~~~G~~~~~dgg~~~~  252 (254)
T PRK07478        232 SDAASFVTGTALLVDGGVSIT  252 (254)
T ss_pred             CchhcCCCCCeEEeCCchhcc
Confidence            988889999999999998764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-44  Score=308.43  Aligned_cols=248  Identities=21%  Similarity=0.287  Sum_probs=208.2

Q ss_pred             cccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCc---chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQD---NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        12 ~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      |+.++++|+++||||+  +|||+++|+.|+++|++|++++|+.   +.++++.+++. ..++.++.||++|++++.++++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~   79 (257)
T PRK08594          1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE-GQESLLLPCDVTSDEEITACFE   79 (257)
T ss_pred             CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC-CCceEEEecCCCCHHHHHHHHH
Confidence            3456889999999997  8999999999999999999998753   34444544443 3467788999999999999999


Q ss_pred             HHHHHhCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC
Q 023553           87 LTVEKFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        87 ~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~  164 (280)
                      ++.+.+|++|++|||||+...  ...++.+.+.++|.+.+++|+.+++.++++++|.|.+  .|+||++||..+..+.++
T Consensus        80 ~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~  157 (257)
T PRK08594         80 TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQN  157 (257)
T ss_pred             HHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCC
Confidence            999999999999999998642  1256778999999999999999999999999999954  589999999999999899


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++..........       .... ... .+.+++.+|+|+|
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-------~~~~-~~~-~p~~r~~~p~~va  228 (257)
T PRK08594        158 YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSI-------LKEI-EER-APLRRTTTQEEVG  228 (257)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHH-------HHHH-hhc-CCccccCCHHHHH
Confidence            999999999999999999999999999999999999999975432111000       0111 112 2348899999999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          245 NAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++++||+++.+++++|+.+.+|||+..
T Consensus       229 ~~~~~l~s~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        229 DTAAFLFSDLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             HHHHHHcCcccccccceEEEECCchhc
Confidence            999999999999999999999999764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-44  Score=308.41  Aligned_cols=245  Identities=21%  Similarity=0.243  Sum_probs=202.4

Q ss_pred             cCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++|+++||||  ++|||+++|+.|+++|++|++++|+.. .++..+++. ..+....++||+++++++.++++++.+++
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            68999999997  679999999999999999999887643 222233332 22344578999999999999999999999


Q ss_pred             CCccEEEECCCCCCCC---CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           93 GTLDIMVNNAGISGAP---CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        93 g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +++|++|||||+....   ...+.+.+.++|++++++|+.++++++++++|.|+++ .|+||++||..+..+.+++..|+
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~  161 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMG  161 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccch
Confidence            9999999999986431   0124567889999999999999999999999998654 58999999999998889999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      ++|+|+++|++.++.|++++||+||+|+||+++|++.........       ....+ ... .+.+++.+|+|||+++.|
T Consensus       162 asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~-------~~~~~-~~~-~p~~r~~~peevA~~v~~  232 (261)
T PRK08690        162 MAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGK-------LLGHV-AAH-NPLRRNVTIEEVGNTAAF  232 (261)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHH-------HHHHH-hhc-CCCCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999998644321110       01111 122 245899999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...+++|+++.+|||+..
T Consensus       233 l~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        233 LLSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             HhCcccCCcceeEEEEcCCccc
Confidence            9999899999999999999865

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-44  Score=305.65  Aligned_cols=243  Identities=33%  Similarity=0.477  Sum_probs=210.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+.+... .++.++.+|+++++++.++++++.+.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999988887777666432 467788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccC-C-CCccch
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGG-L-GPHAYT  169 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~-~-~~~~Y~  169 (280)
                      +++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|.+++ .++|+++||..+.... + ....|+
T Consensus        85 g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~  162 (253)
T PRK05867         85 GGIDIAVCNAGIITV--TPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYC  162 (253)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchH
Confidence            999999999998755  6788899999999999999999999999999997654 5799999999886543 3 457999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|+++++.|++++||+||+|+||+++|++......   .       ...+ .... +.+++.+|+|+|++++|
T Consensus       163 asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~---~-------~~~~-~~~~-~~~r~~~p~~va~~~~~  230 (253)
T PRK05867        163 ASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE---Y-------QPLW-EPKI-PLGRLGRPEELAGLYLY  230 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH---H-------HHHH-HhcC-CCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999998653211   0       1111 1222 34899999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcc
Q 023553          250 LASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+++...++||+.+.+|||+.
T Consensus       231 L~s~~~~~~tG~~i~vdgG~~  251 (253)
T PRK05867        231 LASEASSYMTGSDIVIDGGYT  251 (253)
T ss_pred             HcCcccCCcCCCeEEECCCcc
Confidence            999999999999999999975

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=3.1e-44  Score=310.96  Aligned_cols=253  Identities=24%  Similarity=0.260  Sum_probs=208.3

Q ss_pred             cccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC----------CC----CeEEEecCC--
Q 023553           14 QRLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----------EP----DTFFCHCDV--   75 (280)
Q Consensus        14 ~~l~~k~vlItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~----------~~----~~~~~~~D~--   75 (280)
                      ++|+||++|||||  ++|||+++|+.|+++|++|++ +|+.+.+++....+..          .+    ....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4589999999999  899999999999999999998 7777766665543321          01    135678888  


Q ss_pred             CC------------------HHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHH
Q 023553           76 TK------------------EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH  137 (280)
Q Consensus        76 ~~------------------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  137 (280)
                      ++                  ++++.++++++.+.+|++|+||||||+......++.+.+.++|++++++|+.+++.+++.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            33                  458999999999999999999999986432226788999999999999999999999999


Q ss_pred             HHHhcccCCCceEEEEccccccccCCCC-ccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCceeccccccCCCcchh
Q 023553          138 AARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEEER  215 (280)
Q Consensus       138 ~~~~l~~~~~g~iv~isS~~~~~~~~~~-~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~~~  215 (280)
                      ++|.|.+  .|+||++||..+..+.++. ..|++||+|+++|+++|+.|+++ +|||||+|+||+++|++... .+..+.
T Consensus       164 ~~p~m~~--~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~-~~~~~~  240 (303)
T PLN02730        164 FGPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA-IGFIDD  240 (303)
T ss_pred             HHHHHhc--CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc-ccccHH
Confidence            9999965  3999999999998888865 48999999999999999999986 79999999999999998765 221110


Q ss_pred             hhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccccCcccc
Q 023553          216 TEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRV  278 (280)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~  278 (280)
                             ....... ..+.+++.+|+|++++++||+++...+++|+.+.+|||+..++.-+|+
T Consensus       241 -------~~~~~~~-~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g~~~~~  295 (303)
T PLN02730        241 -------MIEYSYA-NAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMGLALDS  295 (303)
T ss_pred             -------HHHHHHh-cCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccccCCCc
Confidence                   1111111 123478899999999999999998999999999999999998877765

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-44  Score=304.75  Aligned_cols=252  Identities=29%  Similarity=0.412  Sum_probs=216.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.  .++.++.||+++++++.++++.+.+.++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   79 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG--ERARFIATDITDDAAIERAVATVVARFG   79 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999999887777666553  3577889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||....  .. .+.+.++|++.+++|+.+++.+++.++|.|+ ++.|+||++||.++..+.++...|+++|+
T Consensus        80 ~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKa  155 (261)
T PRK08265         80 RVDILVNLACTYLD--DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKA  155 (261)
T ss_pred             CCCEEEECCCCCCC--Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHH
Confidence            99999999998643  33 3578899999999999999999999999997 56799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +++++++.++.|+.++||+||+|+||+++|++..........      ...... ....+.+++.+|+|+|+++++|+++
T Consensus       156 a~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~------~~~~~~-~~~~p~~r~~~p~dva~~~~~l~s~  228 (261)
T PRK08265        156 AIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRA------KADRVA-APFHLLGRVGDPEEVAQVVAFLCSD  228 (261)
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchh------HHHHhh-cccCCCCCccCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999986543221110      011111 1123458999999999999999998


Q ss_pred             CCCceeecEEEeCCCcccccCcccc
Q 023553          254 EARYISGTNLMVDGGFTSVNHSLRV  278 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~~~~~~~  278 (280)
                      ...+++|+.+.+|||+..+++..++
T Consensus       229 ~~~~~tG~~i~vdgg~~~~~~~~~~  253 (261)
T PRK08265        229 AASFVTGADYAVDGGYSALGPEQGV  253 (261)
T ss_pred             cccCccCcEEEECCCeeccCCCCCC
Confidence            8899999999999999988877654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.8e-44  Score=306.96  Aligned_cols=243  Identities=23%  Similarity=0.282  Sum_probs=203.1

Q ss_pred             cCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcc---hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           16 LVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDN---LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        16 l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++|+++||||+  +|||+++|+.|+++|++|++++|+..   .++++.+++   +....+++|++++++++++++++.+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL---GAFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc---CCceEEecCCCCHHHHHHHHHHHHH
Confidence            578999999997  89999999999999999999988742   233333332   2355689999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           91 KFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .++++|++|||||+....  ..++.+.+.++|++++++|+.+++.+++.++|.|.+  .|+||+++|..+..+.+++..|
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y  162 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVM  162 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhh
Confidence            999999999999986421  156778999999999999999999999999999853  5899999999988888999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+.+|+++|+.|++++||+||+|+||+++|++.... +....       ...+... ..+.+++.+|+|+|++++
T Consensus       163 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~~~-------~~~~~~~-~~p~~r~~~peevA~~~~  233 (272)
T PRK08159        163 GVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI-GDFRY-------ILKWNEY-NAPLRRTVTIEEVGDSAL  233 (272)
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC-CcchH-------HHHHHHh-CCcccccCCHHHHHHHHH
Confidence            99999999999999999999999999999999999875432 11000       1111111 223488999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCcccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ||+++...++||+++.+|||+...
T Consensus       234 ~L~s~~~~~itG~~i~vdgG~~~~  257 (272)
T PRK08159        234 YLLSDLSRGVTGEVHHVDSGYHVV  257 (272)
T ss_pred             HHhCccccCccceEEEECCCceee
Confidence            999998999999999999998654

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-44  Score=304.07  Aligned_cols=248  Identities=31%  Similarity=0.463  Sum_probs=211.8

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .++++++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+.+.. ..++.++.+|+++++++.++++++.
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   81 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTE   81 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999764 34555554432 2467788999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC--Ccc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG--PHA  167 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~--~~~  167 (280)
                      +.++++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|++++.++||++||.++..+.++  ...
T Consensus        82 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  159 (254)
T PRK06114         82 AELGALTLAVNAAGIANA--NPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAH  159 (254)
T ss_pred             HHcCCCCEEEECCCCCCC--CChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcch
Confidence            999999999999998765  6788899999999999999999999999999998887899999999998876654  689


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |+++|+|+++++++++.|+.++||+||+|+||+++|++....  ...      +....+ .+. .+.+++.+|+|+++.+
T Consensus       160 Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~--~~~------~~~~~~-~~~-~p~~r~~~~~dva~~~  229 (254)
T PRK06114        160 YNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP--EMV------HQTKLF-EEQ-TPMQRMAKVDEMVGPA  229 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc--cch------HHHHHH-Hhc-CCCCCCcCHHHHHHHH
Confidence            999999999999999999999999999999999999986531  100      001111 222 2358999999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCccc
Q 023553          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +||+++.+.++||+++.+|||+..
T Consensus       230 ~~l~s~~~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        230 VFLLSDAASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             HHHcCccccCcCCceEEECcCEec
Confidence            999999899999999999999753

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.3e-44  Score=306.45  Aligned_cols=251  Identities=30%  Similarity=0.470  Sum_probs=212.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|++|||||++|||+++|+.|+++|++|++++|+ +.+++..+.+.. ..++.++.||+++++++.++++++.+.++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999999 666666655543 34688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+.... .++.+.+.++|++++++|+.+++.+++.++|.|++++ |+||++||..+..+.++...|++||+
T Consensus        82 ~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKa  159 (272)
T PRK08589         82 RVDVLFNNAGVDNAA-GRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKG  159 (272)
T ss_pred             CcCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHH
Confidence            999999999986432 5677889999999999999999999999999997654 89999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+++|+++++.|++++||+||+|+||+++|++.....+......  ...+..... ...+.+++.+|+|+++++++|+++
T Consensus       160 al~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~va~~~~~l~s~  236 (272)
T PRK08589        160 AVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEA--GKTFRENQK-WMTPLGRLGKPEEVAKLVVFLASD  236 (272)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhH--HHHHhhhhh-ccCCCCCCcCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999998765432211000  001111111 122448899999999999999998


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+++.+|||...
T Consensus       237 ~~~~~~G~~i~vdgg~~~  254 (272)
T PRK08589        237 DSSFITGETIRIDGGVMA  254 (272)
T ss_pred             hhcCcCCCEEEECCCccc
Confidence            889999999999999764

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7e-44  Score=304.58  Aligned_cols=243  Identities=21%  Similarity=0.232  Sum_probs=200.0

Q ss_pred             cCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecC---cchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           16 LVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        16 l~~k~vlItGa--s~giG~~ia~~l~~~g~~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++|+++||||  ++|||+++|++|+++|++|++++|.   .+.++++.+...   ...++.||++|++++.++++.+.+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC---CcceeeccCCCHHHHHHHHHHHHH
Confidence            67999999996  6899999999999999999998754   333333333322   234678999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCC---CCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023553           91 KFGTLDIMVNNAGISGAPC---PDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~  167 (280)
                      .+|++|++|||||+.....   ..+.+.+.++|++.+++|+.+++.++++++|+|.  +.|+||++||..+..+.+++..
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~~~~~~~~  158 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAERVVPNYNT  158 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccccCCCCcch
Confidence            9999999999999864310   1245688999999999999999999999999994  3589999999999888888999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++........       +....+ ... .+.+++.+|+|+++++
T Consensus       159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~-------~~~~~~-~~~-~p~~r~~~pedva~~~  229 (260)
T PRK06997        159 MGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFG-------KILDFV-ESN-APLRRNVTIEEVGNVA  229 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchh-------hHHHHH-Hhc-CcccccCCHHHHHHHH
Confidence            9999999999999999999999999999999999998754321100       001111 122 2348999999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCcccc
Q 023553          248 LFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +||+++++.++||+.+.+|||++..
T Consensus       230 ~~l~s~~~~~itG~~i~vdgg~~~~  254 (260)
T PRK06997        230 AFLLSDLASGVTGEITHVDSGFNAV  254 (260)
T ss_pred             HHHhCccccCcceeEEEEcCChhhc
Confidence            9999998999999999999998654

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-44  Score=304.18  Aligned_cols=250  Identities=25%  Similarity=0.314  Sum_probs=211.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++.++++|+++||||++|||+++|+.|+++|++|++++| +.+.++...+.+..  ..++.++.+|++++++++++++++
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999998875 45555555544432  346889999999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCC----CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC
Q 023553           89 VEKFGTLDIMVNNAGISGA----PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~  164 (280)
                      .+.++++|++|||||+...    ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN  161 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC
Confidence            9999999999999997532    114567788999999999999999999999999998777899999999999888899


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      +..|++||+|+++|+++|+.|++++||+|++|+||+++|++.......++        ......+. .+.+++.+|+|++
T Consensus       162 ~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~--------~~~~~~~~-~~~~r~~~p~~va  232 (260)
T PRK08416        162 YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEE--------VKAKTEEL-SPLNRMGQPEDLA  232 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHH--------HHHHHHhc-CCCCCCCCHHHHH
Confidence            99999999999999999999999999999999999999998654322111        11111222 2348899999999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          245 NAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++++|+++...+++|+.+.+|||+.
T Consensus       233 ~~~~~l~~~~~~~~~G~~i~vdgg~~  258 (260)
T PRK08416        233 GACLFLCSEKASWLTGQTIVVDGGTT  258 (260)
T ss_pred             HHHHHHcChhhhcccCcEEEEcCCee
Confidence            99999999888899999999999975

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-44  Score=304.00  Aligned_cols=250  Identities=20%  Similarity=0.212  Sum_probs=210.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +++||||++|||+++|+.|+++|++|++++|+++.+++..+++.....+.++.+|++++++++++++++.+.++++|++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            79999999999999999999999999999999888877777665445678899999999999999999999999999999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhccc-CCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      ||||.......++.+.+.++|.+.+++|+.+++.+++.++|.|.+ ++.|+||++||.++..+.++...|+++|+|+++|
T Consensus        82 ~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~  161 (259)
T PRK08340         82 WNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQL  161 (259)
T ss_pred             ECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHH
Confidence            999986432256778899999999999999999999999998863 4579999999999998888999999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh--hhh-hhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TED-AMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      +++++.+++++||+|++|+||+++|++.+........  ... +......+. .. .+.+++.+|+|||++++||+++.+
T Consensus       162 ~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~p~~r~~~p~dva~~~~fL~s~~~  239 (259)
T PRK08340        162 AKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVL-ER-TPLKRTGRWEELGSLIAFLLSENA  239 (259)
T ss_pred             HHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHh-cc-CCccCCCCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999987542211000  000 000111111 22 245899999999999999999999


Q ss_pred             CceeecEEEeCCCccc
Q 023553          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      +++||+++.+|||+..
T Consensus       240 ~~itG~~i~vdgg~~~  255 (259)
T PRK08340        240 EYMLGSTIVFDGAMTR  255 (259)
T ss_pred             ccccCceEeecCCcCC
Confidence            9999999999999764

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-43  Score=301.27  Aligned_cols=247  Identities=24%  Similarity=0.240  Sum_probs=203.3

Q ss_pred             ccccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCc--chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQD--NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +.++++|+++||||  ++|||+++|+.|+++|++|++++|+.  +..++..+.+.  ..+.++.||++++++++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~   79 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP--EPAPVLELDVTNEEHLASLADRV   79 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC--CCCcEEeCCCCCHHHHHHHHHHH
Confidence            45688999999999  89999999999999999999998764  33445444443  25668899999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           89 VEKFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                      .+.++++|++|||||+....  ..++.+.+.++|++++++|+.+++.+++.++|.|++  .|+||++++.. ..+.+.+.
T Consensus        80 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~~~  156 (256)
T PRK07889         80 REHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPAYD  156 (256)
T ss_pred             HHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCccc
Confidence            99999999999999986321  135778899999999999999999999999999963  58999998753 45567788


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCC-CCCCHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG-TELTANDVAN  245 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~  245 (280)
                      .|++||+|+.+|+++|+.|++++||+||+|+||+++|++..........       ...+ .... +.+ ++.+|+|+|+
T Consensus       157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-------~~~~-~~~~-p~~~~~~~p~evA~  227 (256)
T PRK07889        157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELL-------EEGW-DERA-PLGWDVKDPTPVAR  227 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHH-------HHHH-HhcC-ccccccCCHHHHHH
Confidence            8999999999999999999999999999999999999986543211110       1111 1222 235 6899999999


Q ss_pred             HHHHhcCCCCCceeecEEEeCCCccccc
Q 023553          246 AVLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ++++|+++...+++|+++.+|||+..++
T Consensus       228 ~v~~l~s~~~~~~tG~~i~vdgg~~~~~  255 (256)
T PRK07889        228 AVVALLSDWFPATTGEIVHVDGGAHAMG  255 (256)
T ss_pred             HHHHHhCcccccccceEEEEcCceeccC
Confidence            9999999888999999999999987654

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=2.7e-43  Score=303.78  Aligned_cols=259  Identities=27%  Similarity=0.384  Sum_probs=219.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++... .++.++.||+++++++.++++++.++
T Consensus         5 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (278)
T PRK08277          5 LFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED   84 (278)
T ss_pred             eeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999987777766665432 46788999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCC-------------CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           92 FGTLDIMVNNAGISGAP-------------CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~-------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      ++++|++|||||...+.             ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~  164 (278)
T PRK08277         85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA  164 (278)
T ss_pred             cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh
Confidence            99999999999975431             13467888999999999999999999999999998877899999999999


Q ss_pred             cccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCC
Q 023553          159 AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL  238 (280)
Q Consensus       159 ~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (280)
                      ..+.++...|++||+|+++|+++++.+++++||+||+|.||+++|++.+...........  ...... ... .+.+++.
T Consensus       165 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~-~~~-~p~~r~~  240 (278)
T PRK08277        165 FTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLT--ERANKI-LAH-TPMGRFG  240 (278)
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccch--hHHHHH-hcc-CCccCCC
Confidence            999999999999999999999999999999999999999999999986554322211100  001111 122 3358999


Q ss_pred             CHHHHHHHHHHhcCC-CCCceeecEEEeCCCcccccCc
Q 023553          239 TANDVANAVLFLASD-EARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       239 ~~~dva~~i~~l~s~-~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      +|+|+|++++||+++ ...++||+.+.+|||+..++++
T Consensus       241 ~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~~~~  278 (278)
T PRK08277        241 KPEELLGTLLWLADEKASSFVTGVVLPVDGGFSAYSGV  278 (278)
T ss_pred             CHHHHHHHHHHHcCccccCCcCCCEEEECCCeecccCC
Confidence            999999999999998 8899999999999999887763

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.7e-43  Score=301.06  Aligned_cols=244  Identities=19%  Similarity=0.236  Sum_probs=200.9

Q ss_pred             cCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++|+++||||++  |||+++|+.|+++|++|++++|+. ..++..+++.. .....++.||++|+++++++++++.+.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            6799999999986  999999999999999999999873 33333334322 2345678899999999999999999999


Q ss_pred             CCccEEEECCCCCCCCC---CCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           93 GTLDIMVNNAGISGAPC---PDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        93 g~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      |++|++|||||+.....   ..+.+.+.++|++++++|+.+++.+.+.+.|.|.  ++|+||++||..+..+.+++..|+
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~~~~~~~~~~Y~  160 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMG  160 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCCCCCCCCcchhH
Confidence            99999999999853210   1256788999999999999999999999998663  358999999999988888999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.... +...       ......... .+.+++.+|+||+++++|
T Consensus       161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-~~~~-------~~~~~~~~~-~p~~r~~~pedva~~~~~  231 (262)
T PRK07984        161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFR-------KMLAHCEAV-TPIRRTVTIEDVGNSAAF  231 (262)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcC-CchH-------HHHHHHHHc-CCCcCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999874322 1100       011111122 334899999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...+++|+.+.+|||+..
T Consensus       232 L~s~~~~~itG~~i~vdgg~~~  253 (262)
T PRK07984        232 LCSDLSAGISGEVVHVDGGFSI  253 (262)
T ss_pred             HcCcccccccCcEEEECCCccc
Confidence            9999889999999999999753

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=2.1e-43  Score=301.39  Aligned_cols=246  Identities=33%  Similarity=0.485  Sum_probs=209.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+..          ..+.++.||+++++++.++++++.+.++
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~   71 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------NDVDYFKVDVSNKEQVIKGIDYVISKYG   71 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            368899999999999999999999999999999999986532          2567889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.+++..|+++|+
T Consensus        72 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  149 (258)
T PRK06398         72 RIDILVNNAGIESY--GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKH  149 (258)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHH
Confidence            99999999998654  7788999999999999999999999999999998777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcc--hhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE--ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+++|+++++.|+.+. |+||+|+||+++|++........  ...+........+ .. ..+.+++.+|+|+|++++||+
T Consensus       150 al~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~p~eva~~~~~l~  226 (258)
T PRK06398        150 AVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREW-GE-MHPMKRVGKPEEVAYVVAFLA  226 (258)
T ss_pred             HHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhh-hh-cCCcCCCcCHHHHHHHHHHHc
Confidence            9999999999999876 99999999999999875432111  0000000111111 12 234488999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcccccC
Q 023553          252 SDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      ++..++++|+++.+|||.....|
T Consensus       227 s~~~~~~~G~~i~~dgg~~~~~~  249 (258)
T PRK06398        227 SDLASFITGECVTVDGGLRALIP  249 (258)
T ss_pred             CcccCCCCCcEEEECCccccCCC
Confidence            98889999999999999876643

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-43  Score=299.81  Aligned_cols=247  Identities=28%  Similarity=0.426  Sum_probs=217.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. ..++.++.+|+++++++.++++.+.+.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            467899999999999999999999999999999999998887777666643 2467788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++++.|.+++.++||++||..+..+.++...|+++|
T Consensus        85 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (254)
T PRK08085         85 GPIDVLINNAGIQRR--HPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASK  162 (254)
T ss_pred             CCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHH
Confidence            999999999998654  678889999999999999999999999999999877779999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+++++++++.+++++||++|+|+||+++|++.......+        ....+..... +.+++.+|+|+++++++|++
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~--------~~~~~~~~~~-p~~~~~~~~~va~~~~~l~~  233 (254)
T PRK08085        163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDE--------AFTAWLCKRT-PAARWGDPQELIGAAVFLSS  233 (254)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCH--------HHHHHHHhcC-CCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999876532211        1122223333 34899999999999999999


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +.+++++|+++.+|||+..
T Consensus       234 ~~~~~i~G~~i~~dgg~~~  252 (254)
T PRK08085        234 KASDFVNGHLLFVDGGMLV  252 (254)
T ss_pred             ccccCCcCCEEEECCCeee
Confidence            9999999999999999754

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=9.5e-44  Score=297.04  Aligned_cols=227  Identities=25%  Similarity=0.302  Sum_probs=204.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..++++++|||||+|||+++|+.|+++|++|++++|+.+++.++.+++...  ..+.++.+|+++++++.++.+++.+..
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            357899999999999999999999999999999999999999999998643  578899999999999999999999988


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ..||+||||||+...  ++|.+.++++.++++++|+.+.+.++++++|.|.+++.|.||+|+|.++..+.|..+.|++||
T Consensus        83 ~~IdvLVNNAG~g~~--g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATK  160 (265)
T COG0300          83 GPIDVLVNNAGFGTF--GPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATK  160 (265)
T ss_pred             CcccEEEECCCcCCc--cchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHH
Confidence            899999999999877  899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +++.+|+++|+.|++++||+|.+++||++.|+++. ..+....              ...+...+.+|+++|+..+..+.
T Consensus       161 a~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~~~~~~~--------------~~~~~~~~~~~~~va~~~~~~l~  225 (265)
T COG0300         161 AFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-AKGSDVY--------------LLSPGELVLSPEDVAEAALKALE  225 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-ccccccc--------------cccchhhccCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999986 2111100              01112457899999999999997


Q ss_pred             CCCCce
Q 023553          253 DEARYI  258 (280)
Q Consensus       253 ~~~~~~  258 (280)
                      ...+.+
T Consensus       226 ~~k~~i  231 (265)
T COG0300         226 KGKREI  231 (265)
T ss_pred             cCCceE
Confidence            655443

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-43  Score=305.41  Aligned_cols=244  Identities=31%  Similarity=0.499  Sum_probs=209.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc---------chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD---------NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~   84 (280)
                      .+++|+++||||++|||+++|+.|+++|++|++++++.         +.+++..+++.. ..++.++.+|+++++++.++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            36899999999999999999999999999999998875         556666665543 34677889999999999999


Q ss_pred             HHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC------CceEEEEccccc
Q 023553           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT------KGTIISICSVAG  158 (280)
Q Consensus        85 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~g~iv~isS~~~  158 (280)
                      ++++.+.+|++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|+|+++.      .|+||++||.++
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILRD--RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            99999999999999999998755  6788999999999999999999999999999996542      379999999999


Q ss_pred             cccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCC--C
Q 023553          159 AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG--T  236 (280)
Q Consensus       159 ~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  236 (280)
                      ..+.+++..|++||+|+++|+++++.|++++||+||+|+|| ++|++......             .+...  ...+  +
T Consensus       161 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~-------------~~~~~--~~~~~~~  224 (286)
T PRK07791        161 LQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFA-------------EMMAK--PEEGEFD  224 (286)
T ss_pred             CcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHH-------------HHHhc--CcccccC
Confidence            99999999999999999999999999999999999999999 78887532211             00000  1112  4


Q ss_pred             CCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccccCcc
Q 023553          237 ELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       237 ~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      +.+|+|+|++++||+++...+++|+++.+|||+......|
T Consensus       225 ~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~~~  264 (286)
T PRK07791        225 AMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKISVAEGW  264 (286)
T ss_pred             CCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceEEechh
Confidence            6799999999999999888999999999999998765554

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-43  Score=296.32  Aligned_cols=250  Identities=38%  Similarity=0.570  Sum_probs=216.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+..++..+.+.. ..++.++.+|+++.+++.++++.+.+.
T Consensus         2 ~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   81 (253)
T PRK06172          2 SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA   81 (253)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999998877666555533 346888999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||+|..... .++.+.+.++|++++++|+.+++.++++++|.|.+++.+++|++||..+..+.+++..|+++
T Consensus        82 ~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~s  160 (253)
T PRK06172         82 YGRLDYAFNNAGIEIEQ-GRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAAS  160 (253)
T ss_pred             hCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHH
Confidence            99999999999986542 45778899999999999999999999999999987777999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++|+++++.++.++||+|++|+||+++|++.....+....       ......... +.+++.+|+|+++.++||+
T Consensus       161 Kaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~p~~ia~~~~~l~  232 (253)
T PRK06172        161 KHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPR-------KAEFAAAMH-PVGRIGKVEEVASAVLYLC  232 (253)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChH-------HHHHHhccC-CCCCccCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999997664331111       111122222 3478999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|++|.+|||.++
T Consensus       233 ~~~~~~~~G~~i~~dgg~~~  252 (253)
T PRK06172        233 SDGASFTTGHALMVDGGATA  252 (253)
T ss_pred             CccccCcCCcEEEECCCccC
Confidence            99889999999999999753

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.5e-42  Score=295.30  Aligned_cols=245  Identities=29%  Similarity=0.439  Sum_probs=208.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++++||+++||||++|||++++++|+++|++|++++++..  ++..+.+. ...++.++.+|+++++++.++++++.+.
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE   82 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999877543  22222222 1246778999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.+....|++
T Consensus        83 ~~~~D~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  160 (253)
T PRK08993         83 FGHIDILVNNAGLIRR--EDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA  160 (253)
T ss_pred             hCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHH
Confidence            9999999999998654  6688899999999999999999999999999997664 589999999999998888999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|+|+++++++++.|+.++||+|++|+||+++|++.....+.+..       ...+. . ..+.+++..|+|+|+.+++|
T Consensus       161 sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~-------~~~~~-~-~~p~~r~~~p~eva~~~~~l  231 (253)
T PRK08993        161 SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQR-------SAEIL-D-RIPAGRWGLPSDLMGPVVFL  231 (253)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHH-------HHHHH-h-cCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999986543221111       11111 2 22348999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcc
Q 023553          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++..++++|+++.+|||+.
T Consensus       232 ~s~~~~~~~G~~~~~dgg~~  251 (253)
T PRK08993        232 ASSASDYINGYTIAVDGGWL  251 (253)
T ss_pred             hCccccCccCcEEEECCCEe
Confidence            99999999999999999964

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-42  Score=296.36  Aligned_cols=246  Identities=33%  Similarity=0.477  Sum_probs=212.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++++|++|||||++|||++++++|+++|++|++++|+ +..++..+.+.. ..++.++.||+++++++.++++++.+.
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999998 444444444322 346788999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+....|+++
T Consensus        89 ~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  166 (258)
T PRK06935         89 FGKIDILVNNAGTIRR--APLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTAS  166 (258)
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHH
Confidence            9999999999998754  67788899999999999999999999999999988888999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|++++++++++|+.++||+|++|+||+++|++.+........       .... .+. .+.+++.+|+|+++.+.||+
T Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~-------~~~~-~~~-~~~~~~~~~~dva~~~~~l~  237 (258)
T PRK06935        167 KHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNR-------NDEI-LKR-IPAGRWGEPDDLMGAAVFLA  237 (258)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHH-------HHHH-Hhc-CCCCCCCCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999986543321111       1111 112 23489999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcc
Q 023553          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++.+++++|+++.+|||+.
T Consensus       238 s~~~~~~~G~~i~~dgg~~  256 (258)
T PRK06935        238 SRASDYVNGHILAVDGGWL  256 (258)
T ss_pred             ChhhcCCCCCEEEECCCee
Confidence            9989999999999999965

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.9e-43  Score=302.92  Aligned_cols=256  Identities=22%  Similarity=0.266  Sum_probs=201.3

Q ss_pred             cccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh-----------CCCC-----CeEEEec
Q 023553           12 AVQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL-----------GGEP-----DTFFCHC   73 (280)
Q Consensus        12 ~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~-----------~~~~-----~~~~~~~   73 (280)
                      |..+++||+++|||++  +|||+++|+.|+++|++|++.++.+ .+....+..           ....     ++..+.+
T Consensus         2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (299)
T PRK06300          2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA   80 (299)
T ss_pred             CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence            5678999999999996  9999999999999999999987541 011000000           0000     0111222


Q ss_pred             CCCCH------------------HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHH
Q 023553           74 DVTKE------------------EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM  135 (280)
Q Consensus        74 D~~~~------------------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  135 (280)
                      |+++.                  ++++++++++.+++|++|++|||||.......++.+.+.++|++++++|+.++++++
T Consensus        81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            33222                  468999999999999999999999975422267889999999999999999999999


Q ss_pred             HHHHHhcccCCCceEEEEccccccccCCCCc-cchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCceeccccccCCCcc
Q 023553          136 KHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEE  213 (280)
Q Consensus       136 ~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~-~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~  213 (280)
                      ++++|.|++  .|+||+++|..+..+.++.. .|++||+|+++|+++|+.|+++ +|||||+|+||+++|++.......+
T Consensus       161 ~a~~p~m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~  238 (299)
T PRK06300        161 SHFGPIMNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIE  238 (299)
T ss_pred             HHHHHHhhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccH
Confidence            999999954  48999999999988888765 8999999999999999999987 5999999999999999864321110


Q ss_pred             hhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccccCccccc
Q 023553          214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVF  279 (280)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~~  279 (280)
                      .        ........ .+.+++.+|+|++++++||+++...+++|+++.+|||+..++.-.|+|
T Consensus       239 ~--------~~~~~~~~-~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~  295 (299)
T PRK06300        239 R--------MVDYYQDW-APLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMGIGPEMF  295 (299)
T ss_pred             H--------HHHHHHhc-CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceecCCcCcc
Confidence            0        11111222 234789999999999999999988999999999999999998888877

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=2e-42  Score=296.00  Aligned_cols=253  Identities=33%  Similarity=0.434  Sum_probs=207.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+.  .++.++.+|+++++++.++++++.+.+++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG--DHVLVVEGDVTSYADNQRAVDQTVDAFGK   80 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999999999999887777666543  35678899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHH----HHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSE----FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +|++|||||+.... .++.+.+.++    |++++++|+.+++.+++.++|.|+++ .|+||+++|..+..+.++...|++
T Consensus        81 id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~  158 (263)
T PRK06200         81 LDCFVGNAGIWDYN-TSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTA  158 (263)
T ss_pred             CCEEEECCCCcccC-CCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHH
Confidence            99999999986421 4555666665    89999999999999999999998654 589999999999998888899999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc-chhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE-EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      ||+|+++|+++++.|+++. |+||+|+||+++|++....... ........+......... .+.+++.+|+|++++++|
T Consensus       159 sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~~~eva~~~~f  236 (263)
T PRK06200        159 SKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI-TPLQFAPQPEDHTGPYVL  236 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcC-CCCCCCCCHHHHhhhhhh
Confidence            9999999999999999884 9999999999999986432110 000000001011112222 345899999999999999


Q ss_pred             hcCCC-CCceeecEEEeCCCccccc
Q 023553          250 LASDE-ARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       250 l~s~~-~~~~~G~~i~~dgG~~~~~  273 (280)
                      |+++. ..++||+++.+|||+..-+
T Consensus       237 l~s~~~~~~itG~~i~vdgG~~~~~  261 (263)
T PRK06200        237 LASRRNSRALTGVVINADGGLGIRG  261 (263)
T ss_pred             eecccccCcccceEEEEcCceeecc
Confidence            99988 8999999999999976544

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=8.7e-44  Score=300.71  Aligned_cols=235  Identities=37%  Similarity=0.524  Sum_probs=202.5

Q ss_pred             cCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CCccEEEEC
Q 023553           25 GGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTLDIMVNN  101 (280)
Q Consensus        25 Gas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~li~~  101 (280)
                      |++  +|||+++|+.|+++|++|++++|+.+.+++..+.+.......++.||++++++++++++++.+.+ |++|++|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            566  99999999999999999999999998865544444322123359999999999999999999999 999999999


Q ss_pred             CCCCCC--CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHH
Q 023553          102 AGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN  179 (280)
Q Consensus       102 ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  179 (280)
                      +|....  ...++.+.+.++|++.+++|+.+++.+++++.|+|.+  +|+||++||..+..+.++...|+++|+|+++|+
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~  158 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK--GGSIINISSIAAQRPMPGYSAYSASKAALEGLT  158 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCcccccchhhcccCccchhhHHHHHHHHHHH
Confidence            998754  2367888999999999999999999999999998855  499999999999999999999999999999999


Q ss_pred             HHHHHHHCC-CCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCce
Q 023553          180 KNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYI  258 (280)
Q Consensus       180 ~~la~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~  258 (280)
                      +++|.||++ +|||||+|+||+++|++.......        +.+.+...+..++ +++.+|+|||++++||+|+...++
T Consensus       159 r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~--------~~~~~~~~~~~pl-~r~~~~~evA~~v~fL~s~~a~~i  229 (241)
T PF13561_consen  159 RSLAKELAPKKGIRVNAVSPGPIETPMTERIPGN--------EEFLEELKKRIPL-GRLGTPEEVANAVLFLASDAASYI  229 (241)
T ss_dssp             HHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTH--------HHHHHHHHHHSTT-SSHBEHHHHHHHHHHHHSGGGTTG
T ss_pred             HHHHHHhccccCeeeeeecccceeccchhccccc--------cchhhhhhhhhcc-CCCcCHHHHHHHHHHHhCccccCc
Confidence            999999999 999999999999999985443221        1233444444444 999999999999999999999999


Q ss_pred             eecEEEeCCCcc
Q 023553          259 SGTNLMVDGGFT  270 (280)
Q Consensus       259 ~G~~i~~dgG~~  270 (280)
                      ||++|.+|||++
T Consensus       230 tG~~i~vDGG~s  241 (241)
T PF13561_consen  230 TGQVIPVDGGFS  241 (241)
T ss_dssp             TSEEEEESTTGG
T ss_pred             cCCeEEECCCcC
Confidence            999999999985

...

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.5e-42  Score=293.25  Aligned_cols=246  Identities=35%  Similarity=0.528  Sum_probs=205.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++++|+++||||++|||+++|+.|+++|++|+++.++.+...+..+.   . .+.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~---~-~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (255)
T PRK06463          2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE---K-GVFTIKCDVGNRDQVKKSKEVVEKEF   77 (255)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh---C-CCeEEEecCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999999887765433222221   1 46788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-cCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-~~~~~~~Y~~s  171 (280)
                      +++|++|||||+...  .++.+.+.++|++++++|+.+++.+++.++|.|++++.|+||++||..+.. +.++...|++|
T Consensus        78 ~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  155 (255)
T PRK06463         78 GRVDVLVNNAGIMYL--MPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAIT  155 (255)
T ss_pred             CCCCEEEECCCcCCC--CChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHH
Confidence            999999999998654  678888999999999999999999999999999877789999999998875 44677899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++|+++++.|++++||+|++|+||+++|++.......+..     ......... ..+.+++.+|+|+|+++++|+
T Consensus       156 Kaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~  229 (255)
T PRK06463        156 KAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEA-----EKLRELFRN-KTVLKTTGKPEDIANIVLFLA  229 (255)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccch-----HHHHHHHHh-CCCcCCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999987543221110     011112222 234488999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcc
Q 023553          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++...+++|+++.+|||..
T Consensus       230 s~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        230 SDDARYITGQVIVADGGRI  248 (255)
T ss_pred             ChhhcCCCCCEEEECCCee
Confidence            9888899999999999975

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-42  Score=293.13  Aligned_cols=248  Identities=31%  Similarity=0.462  Sum_probs=217.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++++|+++||||+++||++++++|+++|++|++++|+++..++..+.+... .++.++.+|+++++++.++++.+.+.
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE   84 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            34588999999999999999999999999999999999988777766666432 46788999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||....  .++.+.+.++|++++++|+.+++.+++++.+.|.+++.|+||++||..+..+.++...|+++
T Consensus        85 ~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s  162 (255)
T PRK07523         85 IGPIDILVNNAGMQFR--TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTAT  162 (255)
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHH
Confidence            9999999999998755  77888999999999999999999999999999987778999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++++++.++.+++++||+|++|.||+++|++.........        ...+..... +.+++..|+|+|+++++|+
T Consensus       163 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~~dva~~~~~l~  233 (255)
T PRK07523        163 KGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPE--------FSAWLEKRT-PAGRWGKVEELVGACVFLA  233 (255)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHH--------HHHHHHhcC-CCCCCcCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999998654432211        122222233 3489999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++.+.+++|+.+.+|||...
T Consensus       234 ~~~~~~~~G~~i~~~gg~~~  253 (255)
T PRK07523        234 SDASSFVNGHVLYVDGGITA  253 (255)
T ss_pred             CchhcCccCcEEEECCCeec
Confidence            98889999999999999753

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-42  Score=291.92  Aligned_cols=242  Identities=26%  Similarity=0.363  Sum_probs=203.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH--
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK--   91 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~--   91 (280)
                      +++|+++||||++|||+++|+.|+++|++|++.. ++.+..++...++.. ...+..+.+|+++.+++.++++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999999999999999999999999998875 555655555555432 245677899999999999999888753  


Q ss_pred             --hC--CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023553           92 --FG--TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        92 --~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~  167 (280)
                        ++  ++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|++  .|+||++||.++..+.++...
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  157 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIA  157 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchh
Confidence              34  89999999998643  66888999999999999999999999999999954  489999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |++||+|+++++++++.|+.++||+||+|+||+++|++.........        ...+.... .+.+++.+|+|+|+++
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~dva~~~  228 (252)
T PRK12747        158 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPM--------MKQYATTI-SAFNRLGEVEDIADTA  228 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHH--------HHHHHHhc-CcccCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999998654332211        11122222 2348899999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCcc
Q 023553          248 LFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .+|+++...+++|+.+.+|||+.
T Consensus       229 ~~l~s~~~~~~~G~~i~vdgg~~  251 (252)
T PRK12747        229 AFLASPDSRWVTGQLIDVSGGSC  251 (252)
T ss_pred             HHHcCccccCcCCcEEEecCCcc
Confidence            99999888899999999999974

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-42  Score=291.13  Aligned_cols=247  Identities=31%  Similarity=0.460  Sum_probs=214.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.++...+.+.. ..++.++.+|+++.+++.++++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468899999999999999999999999999999999998877777666543 2457788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||..... .++.+.+.++|++.+++|+.+++.++++++|+|++++.++|+++||..+..+.+++..|++||
T Consensus        84 ~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK07035         84 GRLDILVNNAAANPYF-GHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITK  162 (252)
T ss_pred             CCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHH
Confidence            9999999999975322 567788999999999999999999999999999877789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +++++|+++++.|+.++||+|++|+||+++|++..........       +.. ..+. .+.+++.+|+|+|+++++|++
T Consensus       163 ~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~-------~~~-~~~~-~~~~~~~~~~~va~~~~~l~~  233 (252)
T PRK07035        163 AAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAI-------LKQ-ALAH-IPLRRHAEPSEMAGAVLYLAS  233 (252)
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHH-------HHH-HHcc-CCCCCcCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999987654332110       111 1222 234889999999999999999


Q ss_pred             CCCCceeecEEEeCCCcc
Q 023553          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      +...+++|+++.+|||+.
T Consensus       234 ~~~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        234 DASSYTTGECLNVDGGYL  251 (252)
T ss_pred             ccccCccCCEEEeCCCcC
Confidence            989999999999999975

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-42  Score=292.34  Aligned_cols=197  Identities=32%  Similarity=0.446  Sum_probs=179.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CC-CeEEEecCCCCHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EP-DTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +..+.||+|+|||||+|||.++|..|+++|++++++.|+.+.++...+++..  .. ++.+++||++|++++.++++++.
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999988877777555532  23 59999999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      ..||++|+||||||+...  ....+.+.++++.+|++|++|++.++++++|+|++++.|+||+++|++|+.+.|....|+
T Consensus        87 ~~fg~vDvLVNNAG~~~~--~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~  164 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLV--GFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYS  164 (282)
T ss_pred             HhcCCCCEEEecCccccc--cccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccc
Confidence            999999999999999874  778889999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCC--eEEEEEeCCceeccccccCCCc
Q 023553          170 GSKHAVLGLNKNVAAELGKYG--IRVNCVSPYAVATGLALAHLPE  212 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~  212 (280)
                      +||+|+.+|+++|+.|+.+.+  |++ .|+||+|+|++.......
T Consensus       165 ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~~  208 (282)
T KOG1205|consen  165 ASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELLG  208 (282)
T ss_pred             hHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhcc
Confidence            999999999999999999977  566 999999999987665544

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=8.6e-42  Score=296.63  Aligned_cols=245  Identities=28%  Similarity=0.369  Sum_probs=205.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc--chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD--NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~--~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++|+++||||++|||+++|+.|+++|++|++++|+.  +..+++.+.+.. ..++.++.||+++++++.++++++.+.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999988753  334444433322 245778899999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||..... .++.+.+.++|++++++|+.+++.++++++|.|.+  .++||++||..+..+.++...|+++
T Consensus       126 ~g~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~as  202 (294)
T PRK07985        126 LGGLDIMALVAGKQVAI-PDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAAT  202 (294)
T ss_pred             hCCCCEEEECCCCCcCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHH
Confidence            99999999999975322 56788999999999999999999999999999854  4899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|++++++.++.|++++||+||+|+||+++|++........    .   ....+ .+ ..+.+++.+|+|+|++++||+
T Consensus       203 Kaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~----~---~~~~~-~~-~~~~~r~~~pedva~~~~fL~  273 (294)
T PRK07985        203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQ----D---KIPQF-GQ-QTPMKRAGQPAELAPVYVYLA  273 (294)
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCH----H---HHHHH-hc-cCCCCCCCCHHHHHHHHHhhh
Confidence            999999999999999999999999999999999853211100    0   01111 12 223488999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++.+.+++|+.+.+|||+..
T Consensus       274 s~~~~~itG~~i~vdgG~~~  293 (294)
T PRK07985        274 SQESSYVTAEVHGVCGGEHL  293 (294)
T ss_pred             ChhcCCccccEEeeCCCeeC
Confidence            99899999999999999764

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.1e-41  Score=290.52  Aligned_cols=249  Identities=30%  Similarity=0.393  Sum_probs=218.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+..   ..++.++.||+++++++.++++++.+
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998887776666532   35788899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++||+||....  .++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...|++
T Consensus        85 ~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  162 (257)
T PRK09242         85 HWDGLHILVNNAGGNIR--KAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGM  162 (257)
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHH
Confidence            99999999999998654  6677899999999999999999999999999998777899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|++++.++++++.++.++||++++|+||+++|++.....+.....       ..+ ... .+.+++.+|+|+++++++|
T Consensus       163 sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~-------~~~-~~~-~~~~~~~~~~~va~~~~~l  233 (257)
T PRK09242        163 TKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYY-------EQV-IER-TPMRRVGEPEEVAAAVAFL  233 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHH-------HHH-Hhc-CCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999976554332111       111 122 2347899999999999999


Q ss_pred             cCCCCCceeecEEEeCCCccccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      +++...+++|+.+.+|||.+.++
T Consensus       234 ~~~~~~~~~g~~i~~~gg~~~~~  256 (257)
T PRK09242        234 CMPAASYITGQCIAVDGGFLRYG  256 (257)
T ss_pred             hCcccccccCCEEEECCCeEeec
Confidence            99888899999999999988764

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=8.7e-42  Score=290.83  Aligned_cols=250  Identities=32%  Similarity=0.496  Sum_probs=211.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|+++||||++|||+++++.|+++|++|++++|+.+..++....+.. ..++.++.+|+++++++.++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            78999999999999999999999999999999998877776666543 24677899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      ++|||||+...  .++.+.+.++|++++++|+.+++.+++.+++.|++.+ .++||++||..+..+.++...|+++|+++
T Consensus        82 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (256)
T PRK08643         82 VVVNNAGVAPT--TPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAV  159 (256)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHH
Confidence            99999998654  6788889999999999999999999999999987654 58999999999999989999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh-hhhhh-hHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-DAMVG-FRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +.+++.++.|+.++||+|++|+||+++|++............ ..... ...+. +. .+.+++.+|+|+|+++++|+++
T Consensus       160 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~va~~~~~L~~~  237 (256)
T PRK08643        160 RGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFA-KD-ITLGRLSEPEDVANCVSFLAGP  237 (256)
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHh-cc-CCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999998754321100000 00000 11122 22 2358999999999999999999


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+++.+|||++.
T Consensus       238 ~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        238 DSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             cccCccCcEEEeCCCeec
Confidence            999999999999999763

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-42  Score=291.74  Aligned_cols=251  Identities=24%  Similarity=0.339  Sum_probs=209.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++++|+++|||+++|||+++++.|+++|++|++++|+.+..++..+.+..  ..++.++.+|+++++++.++++    .
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~----~   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAA----E   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH----H
Confidence            457899999999999999999999999999999999998877776666543  2467788999999999887765    3


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|.+++.|+||+++|..+..+.+++..|+++
T Consensus        79 ~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  156 (259)
T PRK06125         79 AGDIDILVNNAGAIPG--GGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAG  156 (259)
T ss_pred             hCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHH
Confidence            5899999999998754  77889999999999999999999999999999987777999999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh-hhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER-TEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      |+|+++|+++++.|+.++||+|++|+||+++|++.......... ..........+. . ..+.+++.+|+|+|+++++|
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~va~~~~~l  234 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELL-A-GLPLGRPATPEEVADLVAFL  234 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHh-c-cCCcCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999975433211100 000001111221 1 22347899999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++..+++||+++.+|||....
T Consensus       235 ~~~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        235 ASPRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             cCchhccccCceEEecCCeeec
Confidence            9988899999999999997654

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=4.5e-42  Score=293.73  Aligned_cols=252  Identities=30%  Similarity=0.416  Sum_probs=203.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+..  ..++.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH--GDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc--CCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            478999999999999999999999999999999999987766654432  245778899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCH----HHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           95 LDIMVNNAGISGAPCPDIREADL----SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +|++|||||+.... .++.+.+.    ++|++.+++|+.+++.++++++|.|.+. .|++|+++|..+..+.++...|++
T Consensus        80 id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~  157 (262)
T TIGR03325        80 IDCLIPNAGIWDYS-TALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTA  157 (262)
T ss_pred             CCEEEECCCCCccC-CccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceecCCCCCchhHH
Confidence            99999999975321 33333333    5799999999999999999999999755 489999999999998888899999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc-chhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE-EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      ||+|+++|+++++.|++++ |+||+|+||+++|++....... ........+ ..+...+. .+.+++.+|+|+|++++|
T Consensus       158 sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~p~~r~~~p~eva~~~~~  234 (262)
T TIGR03325       158 AKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVP-LGDMLKSV-LPIGRMPDAEEYTGAYVF  234 (262)
T ss_pred             HHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccc-hhhhhhhc-CCCCCCCChHHhhhheee
Confidence            9999999999999999987 9999999999999986532110 000000000 11222222 335899999999999999


Q ss_pred             hcCC-CCCceeecEEEeCCCccccc
Q 023553          250 LASD-EARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       250 l~s~-~~~~~~G~~i~~dgG~~~~~  273 (280)
                      |+++ ...+++|+++.+|||+...+
T Consensus       235 l~s~~~~~~~tG~~i~vdgg~~~~~  259 (262)
T TIGR03325       235 FATRGDTVPATGAVLNYDGGMGVRG  259 (262)
T ss_pred             eecCCCcccccceEEEecCCeeecc
Confidence            9986 45689999999999976543

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-41  Score=288.44  Aligned_cols=244  Identities=31%  Similarity=0.478  Sum_probs=211.2

Q ss_pred             cccCCcEEEEEcCCC-hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGAT-GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        14 ~~l~~k~vlItGas~-giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ..+++|+++||||++ |||+++++.|+++|++|++++|+.+.+++..+.+..   ..++.++.+|+++++++.++++.+.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            446799999999985 999999999999999999999998877766655532   2357788999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      +.++++|++|||||....  ..+.+.+.++|++++++|+.+++.+++.++|.|+.+. .|+|++++|..+..+.++...|
T Consensus        93 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y  170 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQ--TPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHY  170 (262)
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcch
Confidence            999999999999998654  6788899999999999999999999999999998765 7899999999999888899999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      +++|+|+++++++++.|++++||+|++|+||+++|++.....+.+        ....+ .... +.+++.+|+|+|++++
T Consensus       171 ~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~--------~~~~~-~~~~-~~~r~~~p~~va~~~~  240 (262)
T PRK07831        171 AAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAE--------LLDEL-AARE-AFGRAAEPWEVANVIA  240 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHH--------HHHHH-HhcC-CCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999865432211        11122 1222 3489999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCc
Q 023553          249 FLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ||+++...++||+++.+|++.
T Consensus       241 ~l~s~~~~~itG~~i~v~~~~  261 (262)
T PRK07831        241 FLASDYSSYLTGEVVSVSSQH  261 (262)
T ss_pred             HHcCchhcCcCCceEEeCCCC
Confidence            999998899999999999974

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-41  Score=289.12  Aligned_cols=253  Identities=33%  Similarity=0.473  Sum_probs=212.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+.+|+++||||++|||+++|+.|+++|++|++++|+.+..++..+.+.  ..+.++.+|+++++++.++++++.+.+++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG--PAAIAVSLDVTRQDSIDRIVAAAVERFGG   80 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC--CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999999888777666554  35778899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|++|||||....  .++.+.+.++|++.+++|+.+++.+++++++.|.+++ .++||++||..+..+.++...|++||+
T Consensus        81 id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  158 (257)
T PRK07067         81 IDILFNNAALFDM--APILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKA  158 (257)
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHH
Confidence            9999999998754  6788889999999999999999999999999987653 589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +++.+++.++.|+.++||+|++|.||+++|+++..............+...........+.+++.+|+|+|+++++|++.
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  238 (257)
T PRK07067        159 AVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASA  238 (257)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999998654211000000000000000112223458999999999999999998


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+++.+|||...
T Consensus       239 ~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        239 DADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             ccccccCcEEeecCCEeC
Confidence            888999999999999654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=2.9e-41  Score=286.19  Aligned_cols=243  Identities=34%  Similarity=0.493  Sum_probs=206.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+++||||++|||+++|++|+++|++|++++|+..  .+..+.+.. ..++.++.+|+++++++.++++++.+.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999998753  222222221 24678899999999999999999999889


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|++|||||....  .++.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||..+..+.+....|+++|
T Consensus        80 ~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  157 (248)
T TIGR01832        80 HIDILVNNAGIIRR--ADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASK  157 (248)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHH
Confidence            99999999998755  6677889999999999999999999999999997665 68999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|++++++++++++.++||+|++|+||+++|++.+...+....       ...+. +. .+.+++.+|+|+|+++++|++
T Consensus       158 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-------~~~~~-~~-~~~~~~~~~~dva~~~~~l~s  228 (248)
T TIGR01832       158 HGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDR-------NAAIL-ER-IPAGRWGTPDDIGGPAVFLAS  228 (248)
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHH-------HHHHH-hc-CCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999986543221111       11111 12 234899999999999999999


Q ss_pred             CCCCceeecEEEeCCCcc
Q 023553          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      ....+++|+++.+|||+.
T Consensus       229 ~~~~~~~G~~i~~dgg~~  246 (248)
T TIGR01832       229 SASDYVNGYTLAVDGGWL  246 (248)
T ss_pred             ccccCcCCcEEEeCCCEe
Confidence            888999999999999974

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-41  Score=289.58  Aligned_cols=256  Identities=30%  Similarity=0.443  Sum_probs=219.6

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+.. ..++.++.||+++++++.++++++.
T Consensus         3 ~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (265)
T PRK07097          3 ENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIE   82 (265)
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999998887776666643 3468889999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|++|||||+...  .++.+.+.++|++++++|+.+++.+.+.++|+|++++.++||++||..+..+.+++..|+
T Consensus        83 ~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (265)
T PRK07097         83 KEVGVIDILVNNAGIIKR--IPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYA  160 (265)
T ss_pred             HhCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHH
Confidence            999999999999998765  678889999999999999999999999999999887789999999999988888999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      ++|++++.+++++++++.++||+|++|+||+++|++..........  .....+..+.....+ .+++.+|+|+|+.+++
T Consensus       161 ~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~  237 (265)
T PRK07097        161 AAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQAD--GSRHPFDQFIIAKTP-AARWGDPEDLAGPAVF  237 (265)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhcccc--ccchhHHHHHHhcCC-ccCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999986543221000  000112223333333 4789999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...+++|+.+.+|||...
T Consensus       238 l~~~~~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        238 LASDASNFVNGHILYVDGGILA  259 (265)
T ss_pred             HhCcccCCCCCCEEEECCCcee
Confidence            9998888999999999999764

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-42  Score=297.40  Aligned_cols=247  Identities=21%  Similarity=0.228  Sum_probs=198.6

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc----------chHHHHHHHhCC-CCCeEEEecCCCCHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD----------NLGQQVCQSLGG-EPDTFFCHCDVTKEE   79 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~----------~~~~~~~~~~~~-~~~~~~~~~D~~~~~   79 (280)
                      |++.++++|+++||||++|||+++|+.|+++|++|++++|+.          +.+++..+.+.. ..++.+++||+++++
T Consensus         1 ~~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~   80 (305)
T PRK08303          1 PMMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPE   80 (305)
T ss_pred             CCCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            355678999999999999999999999999999999999974          344444444432 245778899999999


Q ss_pred             HHHHHHHHHHHHhCCccEEEECC-CCCC--CCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccc
Q 023553           80 DVCSAVDLTVEKFGTLDIMVNNA-GISG--APCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV  156 (280)
Q Consensus        80 ~~~~~~~~~~~~~g~id~li~~a-g~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~  156 (280)
                      +++++++++.+++|++|++|||| |...  ....++.+.+.++|++++++|+.+++.++++++|.|.+++.|+||++||.
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~  160 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDG  160 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCc
Confidence            99999999999999999999999 7531  11256778899999999999999999999999999987777999999997


Q ss_pred             cccc---cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccC
Q 023553          157 AGAI---GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM  233 (280)
Q Consensus       157 ~~~~---~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (280)
                      .+..   +.++...|++||+|+.+|+++|+.|++++||+||+|+||+++|++..........      ....... ..++
T Consensus       161 ~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~------~~~~~~~-~~p~  233 (305)
T PRK08303        161 TAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEE------NWRDALA-KEPH  233 (305)
T ss_pred             cccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCcc------chhhhhc-cccc
Confidence            6643   2335678999999999999999999999999999999999999985432210000      0111111 1222


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCC-CceeecEEE
Q 023553          234 QGTELTANDVANAVLFLASDEA-RYISGTNLM  264 (280)
Q Consensus       234 ~~~~~~~~dva~~i~~l~s~~~-~~~~G~~i~  264 (280)
                      .+++.+|+|+|++++||+++.. .++||+++.
T Consensus       234 ~~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        234 FAISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             cccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            3677899999999999999764 589999876

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.2e-41  Score=287.60  Aligned_cols=239  Identities=26%  Similarity=0.328  Sum_probs=204.4

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecC-----------cchHHHHHHHhCC-CCCeEEEecCCCCHHH
Q 023553           15 RLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQ-----------DNLGQQVCQSLGG-EPDTFFCHCDVTKEED   80 (280)
Q Consensus        15 ~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~-----------~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   80 (280)
                      .++||+++||||+  +|||+++|++|+++|++|++++++           .+...+..+.+.. ..++.++.+|+++.++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            5889999999999  499999999999999999987543           1222233333332 3467888999999999


Q ss_pred             HHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc
Q 023553           81 VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI  160 (280)
Q Consensus        81 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~  160 (280)
                      +.++++++.+.++++|++|||||....  .++.+.+.++|++++++|+.+++.+.+.++|.|.+++.|+||++||..+..
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  160 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTN--NDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG  160 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC
Confidence            999999999999999999999998655  678899999999999999999999999999999877789999999999999


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCH
Q 023553          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      +.+++..|+++|+|+++|+++++.+++++||+|++|+||+++|++....             ........ .+.+++.+|
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~-------------~~~~~~~~-~~~~~~~~~  226 (256)
T PRK12859        161 PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEE-------------IKQGLLPM-FPFGRIGEP  226 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHH-------------HHHHHHhc-CCCCCCcCH
Confidence            9999999999999999999999999999999999999999999863211             11111112 234788999


Q ss_pred             HHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          241 NDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       241 ~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      +|+|+++++|+++...+++|+++.+|||+
T Consensus       227 ~d~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        227 KDAARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHHHHHHHHHhCccccCccCcEEEeCCCc
Confidence            99999999999988889999999999996

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.4e-41  Score=315.70  Aligned_cols=250  Identities=34%  Similarity=0.493  Sum_probs=215.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+.+|++|||||++|||+++|++|+++|++|++++|+.+.++++.+.+.  .++..+.+|++|++++.++++++.+.+|+
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG--DEHLSVQADITDEAAVESAFAQIQARWGR  343 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999999888877766553  35667899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+.... .++.+.+.++|++++++|+.+++++++.++|.|  ++.|+||++||.++..+.++...|+++|++
T Consensus       344 id~li~nAg~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  420 (520)
T PRK06484        344 LDVLVNNAGIAEVF-KPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAA  420 (520)
T ss_pred             CCEEEECCCCcCCC-CChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHHHH
Confidence            99999999986432 567889999999999999999999999999999  446899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++|+++++.|+.++||+||+|+||+++|++..........      ....+ .+.. +.+++.+|+|+|+++++|+++.
T Consensus       421 l~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~------~~~~~-~~~~-~~~~~~~~~dia~~~~~l~s~~  492 (520)
T PRK06484        421 VTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRA------DFDSI-RRRI-PLGRLGDPEEVAEAIAFLASPA  492 (520)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHH------HHHHH-HhcC-CCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999986543221110      01111 1222 3478999999999999999988


Q ss_pred             CCceeecEEEeCCCcccccCccc
Q 023553          255 ARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      ..+++|+++.+|||+..+..+.+
T Consensus       493 ~~~~~G~~i~vdgg~~~~~~~~~  515 (520)
T PRK06484        493 ASYVNGATLTVDGGWTAFGDAGD  515 (520)
T ss_pred             ccCccCcEEEECCCccCCCCCcc
Confidence            89999999999999876655443

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=5.3e-41  Score=292.60  Aligned_cols=245  Identities=29%  Similarity=0.385  Sum_probs=206.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc--hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN--LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++|++|||||++|||+++++.|+++|++|++++++.+  ..++..+.+.. ..++.++.||+++.+++.++++++.+.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999887643  23334444432 346778899999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||..... .++.+.+.++|++.+++|+.+++.++++++|.|.+  .++||++||..+..+.++...|++|
T Consensus       132 ~g~iD~lV~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~as  208 (300)
T PRK06128        132 LGGLDILVNIAGKQTAV-KDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYAST  208 (300)
T ss_pred             hCCCCEEEECCcccCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHH
Confidence            99999999999986432 56888999999999999999999999999999854  5799999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++|+++++.++.++||+|++|.||+++|++........    .   ....+ .. ..+.++++.|+|+|.++++|+
T Consensus       209 K~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~----~---~~~~~-~~-~~p~~r~~~p~dva~~~~~l~  279 (300)
T PRK06128        209 KAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPP----E---KIPDF-GS-ETPMKRPGQPVEMAPLYVLLA  279 (300)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCH----H---HHHHH-hc-CCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999864321111    0   01111 12 233489999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+++.+|||...
T Consensus       280 s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        280 SQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             CccccCccCcEEeeCCCEeC
Confidence            98888999999999999753

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-41  Score=284.64  Aligned_cols=244  Identities=36%  Similarity=0.539  Sum_probs=210.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++++|+++||||+++||+++++.|+++|++|++++|+.+..+ ....+. ...+.++.+|+++++++.++++++.+.++
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~-~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   88 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAE-VAAQLL-GGNAKGLVCDVSDSQSVEAAVAAVISAFG   88 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhh-CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            5689999999999999999999999999999999999876433 223332 23566889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||....  .++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.+....|+++|+
T Consensus        89 ~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  166 (255)
T PRK06841         89 RIDILVNSAGVALL--APAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA  166 (255)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence            99999999998754  6777889999999999999999999999999998777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+++++++++.+++++||+|++|+||+++|++.........        ...+ .+. .+.+++.+|+|+++++++|++.
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--------~~~~-~~~-~~~~~~~~~~~va~~~~~l~~~  236 (255)
T PRK06841        167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEK--------GERA-KKL-IPAGRFAYPEEIAAAALFLASD  236 (255)
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhH--------HHHH-Hhc-CCCCCCcCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999998654332110        0111 122 2348899999999999999999


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+++.+|||+..
T Consensus       237 ~~~~~~G~~i~~dgg~~~  254 (255)
T PRK06841        237 AAAMITGENLVIDGGYTI  254 (255)
T ss_pred             cccCccCCEEEECCCccC
Confidence            899999999999999753

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-41  Score=287.06  Aligned_cols=252  Identities=33%  Similarity=0.493  Sum_probs=209.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh-CCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL-GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.. +..+.+ ....++.++.||+++++++.++++++.+.++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIE-KLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHH-HHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999999987533 232333 2234677889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-~~~~~~~~Y~~sK  172 (280)
                      ++|++|||||....  .++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+. .+.+++..|+++|
T Consensus        82 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK  159 (263)
T PRK08226         82 RIDILVNNAGVCRL--GSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTK  159 (263)
T ss_pred             CCCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHH
Confidence            99999999998654  67888899999999999999999999999999977777899999998874 5667889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +++++++++++.++.++||+|++|+||+++|++.......... .........+ .+.. +.+++.+|+|+|+.+++|++
T Consensus       160 ~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~-~~~~-p~~~~~~~~~va~~~~~l~~  236 (263)
T PRK08226        160 AAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNP-EDPESVLTEM-AKAI-PLRRLADPLEVGELAAFLAS  236 (263)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccC-CCcHHHHHHH-hccC-CCCCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999987543211100 0000111111 2222 34789999999999999999


Q ss_pred             CCCCceeecEEEeCCCcccc
Q 023553          253 DEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +...+++|+.+.+|||.++-
T Consensus       237 ~~~~~~~g~~i~~dgg~~~~  256 (263)
T PRK08226        237 DESSYLTGTQNVIDGGSTLP  256 (263)
T ss_pred             chhcCCcCceEeECCCcccC
Confidence            88899999999999998653

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=9.5e-41  Score=284.38  Aligned_cols=243  Identities=32%  Similarity=0.514  Sum_probs=210.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .+++|+++||||++|||+++++.|+++|++|++++|+.+..+...+.+.. ..++.++.+|+++.+++.++++.+.+.++
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999998877766665533 34677889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||...+  .++ +.+.++|++.+++|+.+++.++++++|+|.+.+.++||++||..+..+.++...|+++|+
T Consensus        88 ~~d~li~~ag~~~~--~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  164 (255)
T PRK06113         88 KVDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKA  164 (255)
T ss_pred             CCCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHH
Confidence            99999999998654  444 688899999999999999999999999997777789999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+++|+++++.++.++||+|++|+||+++|++........         ......+.. +.+++.+|+|+++++++|+++
T Consensus       165 a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~d~a~~~~~l~~~  234 (255)
T PRK06113        165 AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE---------IEQKMLQHT-PIRRLGQPQDIANAALFLCSP  234 (255)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHH---------HHHHHHhcC-CCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999999876532211         111111222 347889999999999999998


Q ss_pred             CCCceeecEEEeCCCcc
Q 023553          254 EARYISGTNLMVDGGFT  270 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++|++|.+|||..
T Consensus       235 ~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        235 AASWVSGQILTVSGGGV  251 (255)
T ss_pred             cccCccCCEEEECCCcc
Confidence            88999999999999953

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-41  Score=285.74  Aligned_cols=248  Identities=33%  Similarity=0.478  Sum_probs=211.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..++++|+++||||++|||+++|+.|+++|+.|++++|+. +..+...+.+.. ..++.++.+|+++.+++.++++.+.+
T Consensus         2 ~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          2 YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999988854 344444444432 34677899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccch
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .++++|++|||||...+  .++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .|+||++||..+..+.++...|+
T Consensus        82 ~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  159 (261)
T PRK08936         82 EFGTLDVMINNAGIENA--VPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYA  159 (261)
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccH
Confidence            99999999999998755  6788899999999999999999999999999997664 58999999999998989999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      ++|+|+++++++++.++.++||+|++|+||+++|++....++....       .... .. ..+.+++.+|+|+++++++
T Consensus       160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-------~~~~-~~-~~~~~~~~~~~~va~~~~~  230 (261)
T PRK08936        160 ASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQ-------RADV-ES-MIPMGYIGKPEEIAAVAAW  230 (261)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHH-------HHHH-Hh-cCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999986654332111       1111 11 2234889999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++..++++|+.+.+|||...
T Consensus       231 l~s~~~~~~~G~~i~~d~g~~~  252 (261)
T PRK08936        231 LASSEASYVTGITLFADGGMTL  252 (261)
T ss_pred             HcCcccCCccCcEEEECCCccc
Confidence            9999899999999999999763

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=9.9e-41  Score=284.48  Aligned_cols=247  Identities=30%  Similarity=0.449  Sum_probs=211.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+|+++||||++|||++++++|+++|++|+++.+ +.+..+...+.+.. ..++.++.+|+++.++++++++++.+.+++
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3689999999999999999999999999998865 44555555555433 357888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|++|||+|....  ..+.+.+.++|++++++|+.+++.++++++++|.+++ .|+||++||..+..+.++...|+++|+
T Consensus        81 id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  158 (256)
T PRK12743         81 IDVLVNNAGAMTK--APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKH  158 (256)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHH
Confidence            9999999998755  6677889999999999999999999999999996654 589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      ++++++++++.++.++||++++|+||+++|++.....++  .        ... .....+.+++.+|+|+++++.+|++.
T Consensus       159 a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~--~--------~~~-~~~~~~~~~~~~~~dva~~~~~l~~~  227 (256)
T PRK12743        159 ALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSD--V--------KPD-SRPGIPLGRPGDTHEIASLVAWLCSE  227 (256)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChH--H--------HHH-HHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999986432111  0        000 11123347889999999999999998


Q ss_pred             CCCceeecEEEeCCCcccccCcc
Q 023553          254 EARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      ...+++|+++.+|||+..++|-|
T Consensus       228 ~~~~~~G~~~~~dgg~~~~~~~~  250 (256)
T PRK12743        228 GASYTTGQSLIVDGGFMLANPQF  250 (256)
T ss_pred             cccCcCCcEEEECCCccccCCcc
Confidence            88899999999999999887655

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-41  Score=284.94  Aligned_cols=252  Identities=27%  Similarity=0.362  Sum_probs=203.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.. ..+..+++.. ..++.++.+|+++.+++.++++++.+.+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            3478999999999999999999999999999999999853 3344444432 3467788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||.... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+.  .++..+|++||
T Consensus        83 ~~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--~~~~~~Y~~sK  159 (260)
T PRK12823         83 GRIDVLINNVGGTIW-AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR--GINRVPYSAAK  159 (260)
T ss_pred             CCCeEEEECCccccC-CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc--CCCCCccHHHH
Confidence            999999999996532 267888999999999999999999999999999987777899999998764  23567899999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCC---cchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP---EEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +|++.|++.++.|++++||+|++|+||+++|++......   ...........+...... ..+.+++.+|+|+|+++++
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~  238 (260)
T PRK12823        160 GGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLD-SSLMKRYGTIDEQVAAILF  238 (260)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhc-cCCcccCCCHHHHHHHHHH
Confidence            999999999999999999999999999999986321100   000000000111111112 2345889999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcc
Q 023553          250 LASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+++...+++|+.+.+|||..
T Consensus       239 l~s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        239 LASDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             HcCcccccccCcEEeecCCCC
Confidence            999888899999999999964

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-40  Score=283.57  Aligned_cols=240  Identities=36%  Similarity=0.449  Sum_probs=206.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+.     ..  ....+.++.+|+++++++.++++.+.+.++
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   74 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TV--DGRPAEFHAADVRDPDQVAALVDAIVERHG   74 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hh--cCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999999998754     11  124577889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.+.|.|.++ ..|+||++||..+..+.+++..|+++|
T Consensus        75 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  152 (252)
T PRK07856         75 RLDVLVNNAGGSPY--ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAK  152 (252)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHH
Confidence            99999999998654  667888999999999999999999999999999764 458999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +++++|++.++.|+.++ |++++|+||+++|++.........       .... ..+. .+.+++.+|+|+|+++++|++
T Consensus       153 ~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~-------~~~~-~~~~-~~~~~~~~p~~va~~~~~L~~  222 (252)
T PRK07856        153 AGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAE-------GIAA-VAAT-VPLGRLATPADIAWACLFLAS  222 (252)
T ss_pred             HHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHH-------HHHH-Hhhc-CCCCCCcCHHHHHHHHHHHcC
Confidence            99999999999999988 999999999999998654332211       0111 1222 234889999999999999999


Q ss_pred             CCCCceeecEEEeCCCcccc
Q 023553          253 DEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +...+++|+.+.+|||....
T Consensus       223 ~~~~~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        223 DLASYVSGANLEVHGGGERP  242 (252)
T ss_pred             cccCCccCCEEEECCCcchH
Confidence            88889999999999997653

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-40  Score=282.99  Aligned_cols=247  Identities=30%  Similarity=0.407  Sum_probs=216.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++++|+++||||+++||++++++|+++|++|++++|+.+.++...+++.. ..++.++.||+++++++.++++++.+.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            4558899999999999999999999999999999999998777766665543 346788999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+.+.+++.|.+++.+++|++||..+..+.++...|+++
T Consensus        86 ~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  163 (256)
T PRK06124         86 HGRLDILVNNVGARDR--RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAA  163 (256)
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHH
Confidence            9999999999998654  67888999999999999999999999999999987778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++++++.++.|+.++||+|++|+||+++|++.......+.        ...+..+. .+.+++.+|+|+++++++|+
T Consensus       164 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~a~~~~~l~  234 (256)
T PRK06124        164 KQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPA--------VGPWLAQR-TPLGRWGRPEEIAGAAVFLA  234 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChH--------HHHHHHhc-CCCCCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999998554322111        11222222 23488999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcc
Q 023553          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++...+++|+.+.+|||+.
T Consensus       235 ~~~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        235 SPAASYVNGHVLAVDGGYS  253 (256)
T ss_pred             CcccCCcCCCEEEECCCcc
Confidence            9988999999999999965

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.8e-43  Score=266.45  Aligned_cols=242  Identities=27%  Similarity=0.359  Sum_probs=213.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+|.|+++++||+..|||+++++.|++.|+.|+.++|+++.+..+.++..  ..+..++.|+++.+.+.+++..    .
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p--~~I~Pi~~Dls~wea~~~~l~~----v   75 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP--SLIIPIVGDLSAWEALFKLLVP----V   75 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC--cceeeeEecccHHHHHHHhhcc----c
Confidence            346899999999999999999999999999999999999999988877654  3478899999997776655553    3


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +.+|.++||||+...  .+|.+.+.++|++.|++|+.+.+...|...+-+..+ ..|.|+++||.++..+..+-..||++
T Consensus        76 ~pidgLVNNAgvA~~--~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcat  153 (245)
T KOG1207|consen   76 FPIDGLVNNAGVATN--HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCAT  153 (245)
T ss_pred             Cchhhhhccchhhhc--chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeec
Confidence            689999999999876  899999999999999999999999999966655444 35889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++++++||.|+.+++||||++.|-.+.|+|.+....+..+....       +  ...+++++-++++|.++++||+
T Consensus       154 KaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~m-------L--~riPl~rFaEV~eVVnA~lfLL  224 (245)
T KOG1207|consen  154 KAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKM-------L--DRIPLKRFAEVDEVVNAVLFLL  224 (245)
T ss_pred             HHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccch-------h--hhCchhhhhHHHHHHhhheeee
Confidence            999999999999999999999999999999999999988876554322       1  2345689999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |..+...||+++.++||++.
T Consensus       225 Sd~ssmttGstlpveGGfs~  244 (245)
T KOG1207|consen  225 SDNSSMTTGSTLPVEGGFSN  244 (245)
T ss_pred             ecCcCcccCceeeecCCccC
Confidence            99999999999999999984

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-40  Score=281.53  Aligned_cols=245  Identities=28%  Similarity=0.407  Sum_probs=207.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ||+++||||++|||+++++.|+++|++|++++|+.+.+++..+.+.. ..++.++.+|+++++++.++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            68999999999999999999999999999999998777766665542 24688899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhhHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      ++|||||....  .++.+.+.++|++++++|+.+++.++++++|.|.++ ..|+||++||..+..+.++...|++||+|+
T Consensus        81 ~lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~  158 (252)
T PRK07677         81 ALINNAAGNFI--CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGV  158 (252)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHH
Confidence            99999997543  677889999999999999999999999999998654 368999999999998888899999999999


Q ss_pred             HHHHHHHHHHHCC-CCeEEEEEeCCceecccc-ccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          176 LGLNKNVAAELGK-YGIRVNCVSPYAVATGLA-LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       176 ~~~~~~la~e~~~-~gi~v~~v~pg~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      ++|+++|+.|+.+ +||+|++|+||+++|+.. ......+.        ......+.. +.+++.+|+|+++++.+|+++
T Consensus       159 ~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~~~va~~~~~l~~~  229 (252)
T PRK07677        159 LAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEE--------AAKRTIQSV-PLGRLGTPEEIAGLAYFLLSD  229 (252)
T ss_pred             HHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHH--------HHHHHhccC-CCCCCCCHHHHHHHHHHHcCc
Confidence            9999999999974 799999999999996432 22111111        111112222 348899999999999999998


Q ss_pred             CCCceeecEEEeCCCccccc
Q 023553          254 EARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ...+++|+++.+|||.+...
T Consensus       230 ~~~~~~g~~~~~~gg~~~~~  249 (252)
T PRK07677        230 EAAYINGTCITMDGGQWLNQ  249 (252)
T ss_pred             cccccCCCEEEECCCeecCC
Confidence            88899999999999977654

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-40  Score=284.56  Aligned_cols=251  Identities=27%  Similarity=0.363  Sum_probs=206.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+++||++|||||++|||+++++.|+++|++|++++|+.+..      .  ...+.++.||+++++++.++++++.+.+
T Consensus         4 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (260)
T PRK06523          4 FLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L--PEGVEFVAADLTTAEGCAAVARAVLERL   75 (260)
T ss_pred             CcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c--CCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence            3468899999999999999999999999999999999986531      1  2357789999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC-CCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~-~~~~Y~~s  171 (280)
                      +++|++|||||........+.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+ +...|+++
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~s  155 (260)
T PRK06523         76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAA  155 (260)
T ss_pred             CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHH
Confidence            99999999999764333567788999999999999999999999999999877779999999999988755 78899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcch--hhhhhhhhhHHHHhh-hccCCCCCCCHHHHHHHHH
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE--RTEDAMVGFRNFVAR-NANMQGTELTANDVANAVL  248 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~i~  248 (280)
                      |+++++|++.++.++.++||++++|+||+++|++.....+...  ......+........ ...+.+++.+|+|+++++.
T Consensus       156 K~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~  235 (260)
T PRK06523        156 KAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIA  235 (260)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999998643211100  000000001111110 1124488999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+++...+++|+.+.+|||...
T Consensus       236 ~l~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        236 FLASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             HHhCcccccccCceEEecCCccC
Confidence            99998889999999999999754

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=5e-41  Score=287.80  Aligned_cols=250  Identities=34%  Similarity=0.479  Sum_probs=205.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++++|+++||||++|||++++++|+++|++|++++++.+..+        ...+.++.+|+++++++.++++++.+.++
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------HENYQFVPTDVSSAEEVNHTVAEIIEKFG   76 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999999999999876532        13567889999999999999999999999


Q ss_pred             CccEEEECCCCCCCC-------CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           94 TLDIMVNNAGISGAP-------CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        94 ~id~li~~ag~~~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                      ++|++|||||.....       +.++.+.+.++|++++++|+.+++.+++++.++|.+++.|+||++||..+..+.++..
T Consensus        77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  156 (266)
T PRK06171         77 RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQS  156 (266)
T ss_pred             CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCc
Confidence            999999999975431       0224568899999999999999999999999999887789999999999999989999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCcee-ccccccCCCcch---hhhhhhhhhHHHHhhhccCCCCCCCHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVA-TGLALAHLPEEE---RTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      .|+++|+|+++|+++++.+++++||+||+|+||+++ |++.........   ...........+.+....+.+++.+|+|
T Consensus       157 ~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~e  236 (266)
T PRK06171        157 CYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSE  236 (266)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHH
Confidence            999999999999999999999999999999999997 665332111000   0000001011121111234599999999


Q ss_pred             HHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          243 VANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       243 va~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ||+++.||+++...++||++|.+|||+..
T Consensus       237 va~~~~fl~s~~~~~itG~~i~vdgg~~~  265 (266)
T PRK06171        237 VADLVCYLLSDRASYITGVTTNIAGGKTR  265 (266)
T ss_pred             hhhheeeeeccccccceeeEEEecCcccC
Confidence            99999999999899999999999999764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=2.6e-40  Score=280.94  Aligned_cols=250  Identities=29%  Similarity=0.377  Sum_probs=211.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.+++++|+++||||+++||++++++|+++|++|++++|+.  .    ..  ...++.++.+|+++++++.++++++.++
T Consensus         2 ~~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~----~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (252)
T PRK08220          2 NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--L----TQ--EDYPFATFVLDVSDAAAVAQVCQRLLAE   73 (252)
T ss_pred             CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--h----hh--cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999986  1    11  1246778999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||+|....  .++.+.+.+++++.+++|+.+++.+++++++.|++++.++||++||..+..+.++...|+++
T Consensus        74 ~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s  151 (252)
T PRK08220         74 TGPLDVLVNAAGILRM--GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGAS  151 (252)
T ss_pred             cCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHH
Confidence            9999999999998755  67888899999999999999999999999999988778999999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++.+++.++.|++++||+|+++.||+++|++........................ ..+.+++.+|+|+|+++++|+
T Consensus       152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~  230 (252)
T PRK08220        152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKL-GIPLGKIARPQEIANAVLFLA  230 (252)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhh-cCCCcccCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999998655432211111111111111122 233478999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcccc
Q 023553          252 SDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++...+++|+++.+|||..++
T Consensus       231 ~~~~~~~~g~~i~~~gg~~~~  251 (252)
T PRK08220        231 SDLASHITLQDIVVDGGATLG  251 (252)
T ss_pred             cchhcCccCcEEEECCCeecC
Confidence            988899999999999997654

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-40  Score=277.83  Aligned_cols=221  Identities=28%  Similarity=0.447  Sum_probs=200.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..-+.+|++||||||++||||++|.+|++.|+++++.+.+.+...+..+.+...+++....||+++.+++.++++++++.
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            44578999999999999999999999999999999999999998888888875568899999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      .|.+|++|||||+...  .++.+.+.+++++++++|+.++++++++|+|.|.++++|+||.|+|.+|+.+.++...||+|
T Consensus       112 ~G~V~ILVNNAGI~~~--~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaS  189 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVTG--KKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCAS  189 (300)
T ss_pred             cCCceEEEeccccccC--CCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhh
Confidence            9999999999999876  88999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCC---CCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          172 KHAVLGLNKNVAAELGK---YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       172 K~al~~~~~~la~e~~~---~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      |+|+.+|+++|+.|+..   .||+...|+|+.++|.|.....+.                   +.+-...+|+++|+.++
T Consensus       190 K~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~-------------------~~l~P~L~p~~va~~Iv  250 (300)
T KOG1201|consen  190 KFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPF-------------------PTLAPLLEPEYVAKRIV  250 (300)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCC-------------------ccccCCCCHHHHHHHHH
Confidence            99999999999999854   579999999999999998762221                   11245679999999998


Q ss_pred             HhcCC
Q 023553          249 FLASD  253 (280)
Q Consensus       249 ~l~s~  253 (280)
                      ..+..
T Consensus       251 ~ai~~  255 (300)
T KOG1201|consen  251 EAILT  255 (300)
T ss_pred             HHHHc
Confidence            77643

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.8e-40  Score=278.86  Aligned_cols=244  Identities=33%  Similarity=0.456  Sum_probs=203.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+++||||++|||+++|+.|+++|++|+++.+ +.+..+.....+.  .++.++.||+++++++.++++++.+.++
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   79 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG--DRAIALQADVTDREQVQAMFATATEHFG   79 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            467999999999999999999999999999988765 4444444444433  4677889999999999999999998888


Q ss_pred             C-ccEEEECCCCCCC----CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           94 T-LDIMVNNAGISGA----PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        94 ~-id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      + +|++|||||+...    ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++|++++|..+..+..+...|
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  159 (253)
T PRK08642         80 KPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDY  159 (253)
T ss_pred             CCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccch
Confidence            7 9999999987421    1145778899999999999999999999999999977777999999998877777778899


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      +++|+|+++|++++++++.++||+||+|+||+++|+......+..        .... ..+. .+.+++.+|+|+++++.
T Consensus       160 ~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~--------~~~~-~~~~-~~~~~~~~~~~va~~~~  229 (253)
T PRK08642        160 TTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDE--------VFDL-IAAT-TPLRKVTTPQEFADAVL  229 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHH--------HHHH-HHhc-CCcCCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999998644322110        0111 1222 23488999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCcc
Q 023553          249 FLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +|+++...+++|+.+.+|||+.
T Consensus       230 ~l~~~~~~~~~G~~~~vdgg~~  251 (253)
T PRK08642        230 FFASPWARAVTGQNLVVDGGLV  251 (253)
T ss_pred             HHcCchhcCccCCEEEeCCCee
Confidence            9999888899999999999964

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.5e-40  Score=286.01  Aligned_cols=246  Identities=26%  Similarity=0.408  Sum_probs=206.9

Q ss_pred             CcccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHH
Q 023553            9 SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus         9 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      +++++.++++|+++||||++|||+++|+.|+++|++|++++++. +..++..+++.. ..++.++.+|+++.+++.++++
T Consensus         3 ~~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~   82 (306)
T PRK07792          3 RTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVA   82 (306)
T ss_pred             cccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            44566789999999999999999999999999999999998754 344555555533 3567889999999999999999


Q ss_pred             HHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-------CCceEEEEcccccc
Q 023553           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-------TKGTIISICSVAGA  159 (280)
Q Consensus        87 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~g~iv~isS~~~~  159 (280)
                      .+.+ ++++|++|||||+...  ..+.+.+.++|++.+++|+.+++++++++.++|+++       ..|+||++||.++.
T Consensus        83 ~~~~-~g~iD~li~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  159 (306)
T PRK07792         83 TAVG-LGGLDIVVNNAGITRD--RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGL  159 (306)
T ss_pred             HHHH-hCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccc
Confidence            9998 9999999999999765  678889999999999999999999999999998643       13799999999999


Q ss_pred             ccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCC
Q 023553          160 IGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT  239 (280)
Q Consensus       160 ~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (280)
                      .+.++...|+++|+|+++|++.++.|+.++||+||+|+||. .|++...........         ....     ....+
T Consensus       160 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~---------~~~~-----~~~~~  224 (306)
T PRK07792        160 VGPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDV---------EAGG-----IDPLS  224 (306)
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchh---------hhhc-----cCCCC
Confidence            99889999999999999999999999999999999999994 888764432211000         0000     22358


Q ss_pred             HHHHHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          240 ANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       240 ~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+++++++.+|+++...+++|+++.+|||....
T Consensus       225 pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~  257 (306)
T PRK07792        225 PEHVVPLVQFLASPAAAEVNGQVFIVYGPMVTL  257 (306)
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEEcCCeEEE
Confidence            999999999999988889999999999998664

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=2.2e-39  Score=276.02  Aligned_cols=244  Identities=31%  Similarity=0.466  Sum_probs=207.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .+++||+++||||+++||+++|+.|+++|++|++++|+.+..++..+.+.  .++.++.+|+++.+++.++++++.++++
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   83 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG--ENAWFIAMDVADEAQVAAGVAEVLGQFG   83 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC--CceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            45889999999999999999999999999999999998876666555443  3577889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||.......++.+.+.++|++.+++|+.+++.+++++.|.|.+. .|+||++||..+..+.+++..|+++|+
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~~sKa  162 (255)
T PRK05717         84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKG  162 (255)
T ss_pred             CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchHHHHH
Confidence            9999999999875433567788999999999999999999999999998654 489999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |++.++++++.++.. +|+|++++||+++|++....... .        ...... ...+.+++.+|+|+++++.++++.
T Consensus       163 a~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~~-~--------~~~~~~-~~~~~~~~~~~~~va~~~~~l~~~  231 (255)
T PRK05717        163 GLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRAE-P--------LSEADH-AQHPAGRVGTVEDVAAMVAWLLSR  231 (255)
T ss_pred             HHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccch-H--------HHHHHh-hcCCCCCCcCHHHHHHHHHHHcCc
Confidence            999999999999986 49999999999999974432111 0        111111 123348899999999999999988


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+.+.+|||+.+
T Consensus       232 ~~~~~~g~~~~~~gg~~~  249 (255)
T PRK05717        232 QAGFVTGQEFVVDGGMTR  249 (255)
T ss_pred             hhcCccCcEEEECCCceE
Confidence            778999999999999753

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-39  Score=277.49  Aligned_cols=254  Identities=27%  Similarity=0.405  Sum_probs=209.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.. +..+.+.. ..++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK   80 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999988766 44444432 346888999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||....  ..+.+.. ++|++.+++|+.+++.+.+.++|.|.+. .++|+++||..+..+.+++..|++|
T Consensus        81 ~~~id~vi~~ag~~~~--~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~s  156 (258)
T PRK08628         81 FGRIDGLVNNAGVNDG--VGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAA  156 (258)
T ss_pred             cCCCCEEEECCcccCC--CcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHH
Confidence            9999999999997543  4455444 9999999999999999999999998644 5899999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++++++.++.|+.++||+|++|.||.++|++............   ....... +..+.-.++.+|+|+|+++++++
T Consensus       157 K~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~  232 (258)
T PRK08628        157 KGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPE---AKLAAIT-AKIPLGHRMTTAEEIADTAVFLL  232 (258)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHH---HHHHHHH-hcCCccccCCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999998654221100000   0111111 11222237899999999999999


Q ss_pred             CCCCCceeecEEEeCCCcccccCc
Q 023553          252 SDEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      ++...+++|+.+.+|||++..+-.
T Consensus       233 ~~~~~~~~g~~~~~~gg~~~~~~~  256 (258)
T PRK08628        233 SERSSHTTGQWLFVDGGYVHLDRA  256 (258)
T ss_pred             ChhhccccCceEEecCCccccccc
Confidence            988889999999999998876643

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-39  Score=278.36  Aligned_cols=251  Identities=28%  Similarity=0.371  Sum_probs=211.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+.+.. ..++.++.+|+++++++.++++++.+.
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999998776665544432 245678899999999999999999998


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||....  .++.+.+.++|++++++|+.+++.++++++|.|.++ +|+|+++||..+..+.++...|+++
T Consensus        84 ~~~iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~as  160 (264)
T PRK07576         84 FGPIDVLVSGAAGNFP--APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAA  160 (264)
T ss_pred             cCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHH
Confidence            9999999999997654  677889999999999999999999999999998644 4899999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCcee-ccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      |+++++|+++++.++.++||+|++|+||+++ |+......+...        ......+. .+.+++..|+|+|+.+++|
T Consensus       161 K~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~dva~~~~~l  231 (264)
T PRK07576        161 KAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPE--------LQAAVAQS-VPLKRNGTKQDIANAALFL  231 (264)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHH--------HHHHHHhc-CCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999997 554333222111        11111122 2347889999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccccCc
Q 023553          251 ASDEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      +++...+++|+.+.+|||+.....+
T Consensus       232 ~~~~~~~~~G~~~~~~gg~~~~~~~  256 (264)
T PRK07576        232 ASDMASYITGVVLPVDGGWSLGGAS  256 (264)
T ss_pred             cChhhcCccCCEEEECCCcccCchH
Confidence            9988889999999999998765544

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-39  Score=283.80  Aligned_cols=239  Identities=27%  Similarity=0.416  Sum_probs=207.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+.+.....+..+.||++|++++.++++++.+.+
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF   83 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999999999999998888877777544567777899999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||+...  .++.+.+.++|++++++|+.+++++++.++|.|.++ .|+||++||..+..+.++...|++||
T Consensus        84 g~id~vI~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  160 (296)
T PRK05872         84 GGIDVVVANAGIASG--GSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASK  160 (296)
T ss_pred             CCCCEEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHH
Confidence            999999999999765  788899999999999999999999999999998654 58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +++++|+++++.|+.++||+|++++||+++|++.........       ....+..+...+.+++.+|+|++++++++++
T Consensus       161 aal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~-------~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~  233 (296)
T PRK05872        161 AGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLP-------AFRELRARLPWPLRRTTSVEKCAAAFVDGIE  233 (296)
T ss_pred             HHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccch-------hHHHHHhhCCCcccCCCCHHHHHHHHHHHHh
Confidence            999999999999999999999999999999998765432211       1122222333345788999999999999999


Q ss_pred             CCCCceeec
Q 023553          253 DEARYISGT  261 (280)
Q Consensus       253 ~~~~~~~G~  261 (280)
                      ....+++|.
T Consensus       234 ~~~~~i~~~  242 (296)
T PRK05872        234 RRARRVYAP  242 (296)
T ss_pred             cCCCEEEch
Confidence            877777665

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-39  Score=281.09  Aligned_cols=233  Identities=26%  Similarity=0.366  Sum_probs=192.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|+++|||+ +|||+++|++|+ +|++|++++|+.+.+++..+++.. ..++.++.||+++++++.++++++ +.++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            689999998 699999999996 899999999998777766665543 246788999999999999999988 5679999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC--------------
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--------------  162 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~--------------  162 (280)
                      ++|||||+..         ..++|++++++|+.+++++++.++|.|.+  +|++|+++|.++..+.              
T Consensus        79 ~li~nAG~~~---------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  147 (275)
T PRK06940         79 GLVHTAGVSP---------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALATTP  147 (275)
T ss_pred             EEEECCCcCC---------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhccccccc
Confidence            9999999752         12679999999999999999999999954  4788999998887642              


Q ss_pred             ----------------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHH
Q 023553          163 ----------------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF  226 (280)
Q Consensus       163 ----------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  226 (280)
                                      +++..|++||+|++.+++.++.|+.++||+||+|+||+++|++..........     +.....
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~-----~~~~~~  222 (275)
T PRK06940        148 TEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRG-----DGYRNM  222 (275)
T ss_pred             cccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCch-----HHHHHH
Confidence                            24678999999999999999999999999999999999999986543321110     001111


Q ss_pred             HhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          227 VARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       227 ~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                       ... .+.+++.+|+|+|++++||+++..+++||+.+.+|||+..
T Consensus       223 -~~~-~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        223 -FAK-SPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             -hhh-CCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence             122 2348999999999999999999899999999999999754

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=277.94  Aligned_cols=251  Identities=27%  Similarity=0.418  Sum_probs=209.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +|++|||||+++||+++++.|+++|++|++++|+.+..++..+.+..   ..++.++.||+++++++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999999998777666555432   246888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|++|||||....  .++.+.+.++|++.+++|+.+++.+++++++.|.+++ .++||++||..+..+.+....|++||+
T Consensus        82 id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKa  159 (259)
T PRK12384         82 VDLLVYNAGIAKA--AFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKF  159 (259)
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHH
Confidence            9999999998765  7788899999999999999999999999999997766 689999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCce-eccccccCCCcchhhhh-hhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAV-ATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+++++++++.|++++||+|+++.||++ .|++.....+....... ............ .+.+++.+|+|+++++++|+
T Consensus       160 a~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dv~~~~~~l~  238 (259)
T PRK12384        160 GGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDK-VPLKRGCDYQDVLNMLLFYA  238 (259)
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHh-CcccCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999975 66665433221100000 001111112222 33589999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +....+++|+.+.+|||...
T Consensus       239 ~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        239 SPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             CcccccccCceEEEcCCEEe
Confidence            98888999999999999753

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=2.4e-39  Score=272.62  Aligned_cols=232  Identities=18%  Similarity=0.185  Sum_probs=195.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +|++|||||++|||+++++.|+++|++|++++|+.+...+..+..    .+.++.+|+++++++.++++++.+.++++|+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            689999999999999999999999999999999876543333322    2567899999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC--CceEEEEccccccccCCCCccchhhHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      +|||||....  ....+.+.++|++++++|+.+++.+++.++|.|.+.+  .++||++||..+..+.++...|++||+|+
T Consensus        78 lv~~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal  155 (236)
T PRK06483         78 IIHNASDWLA--EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL  155 (236)
T ss_pred             EEECCccccC--CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence            9999998654  4456778999999999999999999999999997765  68999999999988888999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      ++|+++++.|+++ +||||+|+||++.|+...    .+..       .... .. ..+.+++..|+|+++++.||++  .
T Consensus       156 ~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~----~~~~-------~~~~-~~-~~~~~~~~~~~~va~~~~~l~~--~  219 (236)
T PRK06483        156 DNMTLSFAAKLAP-EVKVNSIAPALILFNEGD----DAAY-------RQKA-LA-KSLLKIEPGEEEIIDLVDYLLT--S  219 (236)
T ss_pred             HHHHHHHHHHHCC-CcEEEEEccCceecCCCC----CHHH-------HHHH-hc-cCccccCCCHHHHHHHHHHHhc--C
Confidence            9999999999987 599999999999775321    0000       0111 11 2234788999999999999996  5


Q ss_pred             CceeecEEEeCCCccc
Q 023553          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      .++||+++.+|||...
T Consensus       220 ~~~~G~~i~vdgg~~~  235 (236)
T PRK06483        220 CYVTGRSLPVDGGRHL  235 (236)
T ss_pred             CCcCCcEEEeCccccc
Confidence            7999999999999753

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=280.24  Aligned_cols=244  Identities=24%  Similarity=0.274  Sum_probs=208.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-------HHHHHHHhCC-CCCeEEEecCCCCHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-------GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-------~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~   85 (280)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+.       +++..+.+.. ..++.++.+|+++++++.+++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            45789999999999999999999999999999999998643       3333333332 346888999999999999999


Q ss_pred             HHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC--C
Q 023553           86 DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--L  163 (280)
Q Consensus        86 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~--~  163 (280)
                      +++.+.++++|++|||||....  .++.+.+.++|++++++|+.+++.++++++|.|++++.|+|++++|..+..+.  +
T Consensus        82 ~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  159 (273)
T PRK08278         82 AKAVERFGGIDICVNNASAINL--TGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFA  159 (273)
T ss_pred             HHHHHHhCCCCEEEECCCCcCC--CCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccC
Confidence            9999999999999999998755  67788999999999999999999999999999988778999999998887776  7


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCC-ceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHH
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPY-AVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      ++..|++||+|+++|+++++.|+.++||+|++|+|| .++|++.+......                  .+.+++.+|++
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~~------------------~~~~~~~~p~~  221 (273)
T PRK08278        160 PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGD------------------EAMRRSRTPEI  221 (273)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccccc------------------ccccccCCHHH
Confidence            889999999999999999999999999999999999 68998755432110                  01256789999


Q ss_pred             HHHHHHHhcCCCCCceeecEEEeCCCcccccCcccc
Q 023553          243 VANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRV  278 (280)
Q Consensus       243 va~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~  278 (280)
                      +|+++++++++...+++|+++ +|+++....+.-++
T Consensus       222 va~~~~~l~~~~~~~~~G~~~-~~~~~~~~~~~~~~  256 (273)
T PRK08278        222 MADAAYEILSRPAREFTGNFL-IDEEVLREAGVTDF  256 (273)
T ss_pred             HHHHHHHHhcCccccceeEEE-eccchhhccCcchh
Confidence            999999999988889999988 79998887665443

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-39  Score=276.83  Aligned_cols=245  Identities=30%  Similarity=0.439  Sum_probs=212.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.++++|+++||||+++||+++++.|+++|++|++++|+.+.+++....+.. ..++.++.+|+++++++.++++++.+.
T Consensus         4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (258)
T PRK06949          4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE   83 (258)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4558899999999999999999999999999999999998887776665532 346788999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC--------CceEEEEccccccccCC
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--------KGTIISICSVAGAIGGL  163 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--------~g~iv~isS~~~~~~~~  163 (280)
                      ++++|++|||||....  .++.+.+.++|+.++++|+.+++.++++++|.|.++.        .+++|+++|..+..+.+
T Consensus        84 ~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  161 (258)
T PRK06949         84 AGTIDILVNNSGVSTT--QKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP  161 (258)
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC
Confidence            9999999999998654  6677888999999999999999999999999986553        47999999999988888


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHH
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV  243 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  243 (280)
                      ...+|+++|++++.+++.++.++.++||+|++|+||+++|++.......+.         .....+.. +.+++..|+|+
T Consensus       162 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~---------~~~~~~~~-~~~~~~~p~~~  231 (258)
T PRK06949        162 QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQ---------GQKLVSML-PRKRVGKPEDL  231 (258)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHH---------HHHHHhcC-CCCCCcCHHHH
Confidence            899999999999999999999999999999999999999998765432211         01112222 33789999999


Q ss_pred             HHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          244 ANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       244 a~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++.+.||+++.+.+++|+++.+|||+
T Consensus       232 ~~~~~~l~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        232 DGLLLLLAADESQFINGAIISADDGF  257 (258)
T ss_pred             HHHHHHHhChhhcCCCCcEEEeCCCC
Confidence            99999999998999999999999996

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-39  Score=274.14  Aligned_cols=247  Identities=30%  Similarity=0.458  Sum_probs=215.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.++++|+++||||+++||+++++.|+++|++|++++|+++..++..+.+.. ..++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4457899999999999999999999999999999999998877776666543 246888999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||+|....  ..+.+.+.+++++.++.|+.+++.+++.+.|.|.+++.|++|++||..+..+.+....|+++
T Consensus        82 ~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  159 (250)
T PRK12939         82 LGGLDGLVNNAGITNS--KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVAS  159 (250)
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHH
Confidence            9999999999998765  67788899999999999999999999999999988778999999999999998889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++.+++.++.++..++|++++|.||+++|++.+......         +....... .+.+++.+|+|+|+++++++
T Consensus       160 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~dva~~~~~l~  229 (250)
T PRK12939        160 KGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADE---------RHAYYLKG-RALERLQVPDDVAGAVLFLL  229 (250)
T ss_pred             HHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChH---------HHHHHHhc-CCCCCCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999876543211         11111122 23478899999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...++++|+.|.+|||.++
T Consensus       230 ~~~~~~~~G~~i~~~gg~~~  249 (250)
T PRK12939        230 SDAARFVTGQLLPVNGGFVM  249 (250)
T ss_pred             CccccCccCcEEEECCCccc
Confidence            98788999999999999764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.4e-39  Score=274.08  Aligned_cols=243  Identities=26%  Similarity=0.402  Sum_probs=206.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++|+++||||++|||+++|++|+++|++|++. .++.+..++..+.+.. ..++..+.||+++.+++.++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999998885 4444444444444432 34677889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||....  .++.+.+.++|++++++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|+
T Consensus        81 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~  158 (246)
T PRK12938         81 EIDVLVNNAGITRD--VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA  158 (246)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHH
Confidence            99999999998754  6788899999999999999999999999999998777789999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      ++++++++++.++.++||++++|+||++.|++.....+.          ........ .+..++.+++|+++++.+|++.
T Consensus       159 a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~~v~~~~~~l~~~  227 (246)
T PRK12938        159 GIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPD----------VLEKIVAT-IPVRRLGSPDEIGSIVAWLASE  227 (246)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChH----------HHHHHHhc-CCccCCcCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999986543221          11111122 2336789999999999999998


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+++.+|||..+
T Consensus       228 ~~~~~~g~~~~~~~g~~~  245 (246)
T PRK12938        228 ESGFSTGADFSLNGGLHM  245 (246)
T ss_pred             ccCCccCcEEEECCcccC
Confidence            888999999999999654

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-39  Score=277.07  Aligned_cols=251  Identities=27%  Similarity=0.343  Sum_probs=210.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.. ..++.++.+|+++++++.++++++.+.+++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999998877777666543 246788999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||..... .++.+.+.++|++.+++|+.+++.+++++.+.|.+. .++||++||..+..+.+++..|+++|++
T Consensus        83 ~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~a  160 (258)
T PRK07890         83 VDALVNNAFRVPSM-KPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRHSQPKYGAYKMAKGA  160 (258)
T ss_pred             ccEEEECCccCCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhccCCCCcchhHHHHHH
Confidence            99999999976432 567788999999999999999999999999998654 4799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhh--hhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT--EDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++.+++.++.+++.+||++++++||++.|++...........  .........+ .+ ..+.+++.+|+|++++++++++
T Consensus       161 ~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~dva~a~~~l~~  238 (258)
T PRK07890        161 LLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAET-AA-NSDLKRLPTDDEVASAVLFLAS  238 (258)
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHH-hh-cCCccccCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999754322111000  0000001111 11 1234788999999999999999


Q ss_pred             CCCCceeecEEEeCCCcc
Q 023553          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      +...+++|+.+.+|||..
T Consensus       239 ~~~~~~~G~~i~~~gg~~  256 (258)
T PRK07890        239 DLARAITGQTLDVNCGEY  256 (258)
T ss_pred             HhhhCccCcEEEeCCccc
Confidence            877899999999999975

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-39  Score=272.46  Aligned_cols=245  Identities=32%  Similarity=0.439  Sum_probs=208.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+++|+++||||+++||++++++|+++|++|++++|+.+..++..+++.  .++.+++||+++.+++.++++.+.+.+++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELG--ESALVIRADAGDVAAQKALAQALAEAFGR   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4679999999999999999999999999999999999877766665553  35778899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||....  .++.+.+.++|++++++|+.+++.++++++|+|..  .+++++++|..+..+.+....|+++|++
T Consensus        81 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a  156 (249)
T PRK06500         81 LDAVFINAGVAKF--APLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAA  156 (249)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHH
Confidence            9999999998754  66778999999999999999999999999999843  4789999999998888999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++++++++.|++++||++++++||+++|++...........    ........+.. +.+++.+|+|+++++++|++..
T Consensus       157 ~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        157 LLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATL----DAVAAQIQALV-PLGRFGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccch----HHHHHHHHhcC-CCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999865421111000    11111112222 3477899999999999999988


Q ss_pred             CCceeecEEEeCCCcc
Q 023553          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+.+.+|||..
T Consensus       232 ~~~~~g~~i~~~gg~~  247 (249)
T PRK06500        232 SAFIVGSEIIVDGGMS  247 (249)
T ss_pred             ccCccCCeEEECCCcc
Confidence            8899999999999965

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=3.4e-39  Score=274.34  Aligned_cols=248  Identities=37%  Similarity=0.563  Sum_probs=210.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      |+++||||+++||++++++|+++|++|++++|+.+.+++..+.+.. ..++.++.+|+++++++.++++.+.++++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999999999999998777666665543 346788999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      +|||+|....  .++.+.+.++|++++++|+.+++.+++.+++.|++.+ .++||++||..+..+.++...|+++|++++
T Consensus        81 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  158 (254)
T TIGR02415        81 MVNNAGVAPI--TPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVR  158 (254)
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHH
Confidence            9999998654  6788999999999999999999999999999997765 489999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh-hhh-hhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-DAM-VGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      .|++.++.++.+.||+|++++||+++|++............ ... .....+ . ...+.+++.+|+|+++++.+|+++.
T Consensus       159 ~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~a~~~~~l~~~~  236 (254)
T TIGR02415       159 GLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEF-S-SEIALGRPSEPEDVAGLVSFLASED  236 (254)
T ss_pred             HHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHH-H-hhCCCCCCCCHHHHHHHHHhhcccc
Confidence            99999999999999999999999999998654322111000 000 011111 1 1233488999999999999999998


Q ss_pred             CCceeecEEEeCCCcc
Q 023553          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+++.+|||+.
T Consensus       237 ~~~~~g~~~~~d~g~~  252 (254)
T TIGR02415       237 SDYITGQSILVDGGMV  252 (254)
T ss_pred             cCCccCcEEEecCCcc
Confidence            8899999999999975

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-39  Score=272.32  Aligned_cols=250  Identities=36%  Similarity=0.541  Sum_probs=214.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++++|+++||||+++||++++++|+++|++|++++|+.+..++..+.+....++.++.||++|+++++++++.+.++++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWG   80 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999999887776666554345678899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++||++|....  ..+.+.+.+++++++++|+.+++.+.+.+++.|++++.++|+++||..+..+.++...|+.+|+
T Consensus        81 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~  158 (252)
T PRK06138         81 RLDVLVNNAGFGCG--GTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKG  158 (252)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHH
Confidence            99999999998755  6677889999999999999999999999999998877899999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +++.+++.++.+++.+||++++++||.+.|++............    ........ ..+..++.+++|++++++++++.
T Consensus       159 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~d~a~~~~~l~~~  233 (252)
T PRK06138        159 AIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPE----ALREALRA-RHPMNRFGTAEEVAQAALFLASD  233 (252)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChH----HHHHHHHh-cCCCCCCcCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999998765433211110    11111111 22335688999999999999998


Q ss_pred             CCCceeecEEEeCCCcc
Q 023553          254 EARYISGTNLMVDGGFT  270 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++|+.+.+|||++
T Consensus       234 ~~~~~~g~~~~~~~g~~  250 (252)
T PRK06138        234 ESSFATGTTLVVDGGWL  250 (252)
T ss_pred             hhcCccCCEEEECCCee
Confidence            88899999999999975

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.8e-39  Score=271.17  Aligned_cols=248  Identities=39%  Similarity=0.554  Sum_probs=214.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+..++..+.+....++.++.||+++++++.++++++.+.+++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999999999998877776666543446888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++||++|..... .++.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+.+|++
T Consensus        82 ~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~  160 (251)
T PRK07231         82 VDILVNNAGTTHRN-GPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGA  160 (251)
T ss_pred             CCEEEECCCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHH
Confidence            99999999986432 56778899999999999999999999999999987778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      ++.+++.++.+++++||++++++||+++|++........  ..    .......... +.+++.+|+|+|+++++|+++.
T Consensus       161 ~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~--~~----~~~~~~~~~~-~~~~~~~~~dva~~~~~l~~~~  233 (251)
T PRK07231        161 VITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP--TP----ENRAKFLATI-PLGRLGTPEDIANAALFLASDE  233 (251)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc--Ch----HHHHHHhcCC-CCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999998999999999999999866543321  00    0111112222 3478899999999999999887


Q ss_pred             CCceeecEEEeCCCcc
Q 023553          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+.+.+|||..
T Consensus       234 ~~~~~g~~~~~~gg~~  249 (251)
T PRK07231        234 ASWITGVTLVVDGGRC  249 (251)
T ss_pred             ccCCCCCeEEECCCcc
Confidence            7899999999999964

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-38  Score=276.09  Aligned_cols=246  Identities=31%  Similarity=0.444  Sum_probs=209.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+ ..+...+.+.. ..++.++.||+++.+++.++++++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999854 33444444432 24678899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||..... .++.+.+.++|.+.+++|+.+++.+++++++.|++  .++||++||..+..+.++...|++
T Consensus       121 ~~~~iD~lI~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  197 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQ-QSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSA  197 (290)
T ss_pred             HcCCCCEEEECCcccCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHH
Confidence            999999999999986432 56788999999999999999999999999999843  489999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|+|++.++++++.++.++||+|++|+||+++|++.......+        ....+. .. .+.+++.+|+|+|+++++|
T Consensus       198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~--------~~~~~~-~~-~~~~~~~~~~dva~~~~~l  267 (290)
T PRK06701        198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEE--------KVSQFG-SN-TPMQRPGQPEELAPAYVFL  267 (290)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHH--------HHHHHH-hc-CCcCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999865532211        011111 22 2348899999999999999


Q ss_pred             cCCCCCceeecEEEeCCCccc
Q 023553          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++....+++|+.+.+|||...
T Consensus       268 l~~~~~~~~G~~i~idgg~~~  288 (290)
T PRK06701        268 ASPDSSYITGQMLHVNGGVIV  288 (290)
T ss_pred             cCcccCCccCcEEEeCCCccc
Confidence            999888999999999999754

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.4e-39  Score=272.05  Aligned_cols=245  Identities=29%  Similarity=0.359  Sum_probs=209.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEE-EecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++|+++||||+++||++++++|+++|++|++ ..|+.+..++..+.++. ..++.++.+|+++++++.++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999876 47777766666555543 35678889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++++.|++++.|+||++||..+..+.++...|+++|+
T Consensus        82 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  159 (250)
T PRK08063         82 RLDVFVNNAASGVL--RPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKA  159 (250)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHH
Confidence            99999999998755  6788899999999999999999999999999998888899999999988888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      ++++|+++++.++.+.||++++|.||+++|++.........        ....... ..+.+++++++|+|++++++++.
T Consensus       160 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~dva~~~~~~~~~  230 (250)
T PRK08063        160 ALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREE--------LLEDARA-KTPAGRMVEPEDVANAVLFLCSP  230 (250)
T ss_pred             HHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchH--------HHHHHhc-CCCCCCCcCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999998654321111        1111111 12236789999999999999988


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+.+.+|||...
T Consensus       231 ~~~~~~g~~~~~~gg~~~  248 (250)
T PRK08063        231 EADMIRGQTIIVDGGRSL  248 (250)
T ss_pred             hhcCccCCEEEECCCeee
Confidence            778999999999999764

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-38  Score=271.37  Aligned_cols=248  Identities=28%  Similarity=0.398  Sum_probs=212.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+.. ...+.++.+|+++++++.++++++.+.+
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            347899999999999999999999999999999999998877766666543 2467888999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhccc-CCCceEEEEccccccccCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++||+||....  ..+.+.+.+++++++++|+.+++.+.+++.+.|.+ .+.++||++||..+..+.++...|+++
T Consensus        86 ~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  163 (263)
T PRK07814         86 GRLDIVVNNVGGTMP--NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTA  163 (263)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHH
Confidence            999999999998654  66788999999999999999999999999999976 467899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++.++++++.++.+ +|++++|+||++.|++.........        ........ .+..++.+|+|+|+++++++
T Consensus       164 K~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~va~~~~~l~  233 (263)
T PRK07814        164 KAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDE--------LRAPMEKA-TPLRRLGDPEDIAAAAVYLA  233 (263)
T ss_pred             HHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHH--------HHHHHHhc-CCCCCCcCHHHHHHHHHHHc
Confidence            99999999999999987 6999999999999997643211110        11111222 23367889999999999999


Q ss_pred             CCCCCceeecEEEeCCCccccc
Q 023553          252 SDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ++...+++|+.+.+|||....|
T Consensus       234 ~~~~~~~~g~~~~~~~~~~~~~  255 (263)
T PRK07814        234 SPAGSYLTGKTLEVDGGLTFPN  255 (263)
T ss_pred             CccccCcCCCEEEECCCccCCC
Confidence            9888899999999999988733

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-38  Score=271.53  Aligned_cols=240  Identities=24%  Similarity=0.330  Sum_probs=203.7

Q ss_pred             ccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCc-----------chHHHHHHHhCC-CCCeEEEecCCCCHHH
Q 023553           15 RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQD-----------NLGQQVCQSLGG-EPDTFFCHCDVTKEED   80 (280)
Q Consensus        15 ~l~~k~vlItGas~--giG~~ia~~l~~~g~~Vi~~~r~~-----------~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   80 (280)
                      ++++|+++||||++  |||++++++|+++|++|++++|++           .......+.+.. ..++.++.+|++++++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            56899999999994  999999999999999999999872           111112233322 2468889999999999


Q ss_pred             HHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc
Q 023553           81 VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI  160 (280)
Q Consensus        81 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~  160 (280)
                      +.++++++.+.++++|++|||||+...  .++.+.+.+++++.+++|+.+++.+++++++.|.++..++||++||..+..
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTH--TRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            999999999999999999999998654  678889999999999999999999999999999777778999999999988


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCH
Q 023553          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      +.++...|+++|+|+++++++++.++..+||+|++++||+++|++.......            .+ .. ..+.+++.+|
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~------------~~-~~-~~~~~~~~~~  225 (256)
T PRK12748        160 PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKH------------HL-VP-KFPQGRVGEP  225 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHH------------hh-hc-cCCCCCCcCH
Confidence            8888999999999999999999999999999999999999999864321100            00 01 1122678899


Q ss_pred             HHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          241 NDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       241 ~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +|+++++.+|+++...+++|+++.+|||++
T Consensus       226 ~~~a~~~~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        226 VDAARLIAFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HHHHHHHHHHhCcccccccCCEEEecCCcc
Confidence            999999999999888899999999999975

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.9e-38  Score=268.22  Aligned_cols=243  Identities=28%  Similarity=0.449  Sum_probs=210.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++++|+++||||+++||+++++.|+++|+.|++.+|+.+.+++..+...  .++.++.+|+++.+++.++++++.+.++
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG--ERVKIFPANLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC--CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999998887776655543  3567889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||....  .++.+.+.++|++++++|+.+++.+++++.+.+.+++.++||++||..+..+.++...|+++|+
T Consensus        80 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~  157 (245)
T PRK12936         80 GVDILVNNAGITKD--GLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKA  157 (245)
T ss_pred             CCCEEEECCCCCCC--CccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHH
Confidence            99999999998765  6677889999999999999999999999999887777799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+.++++.++.++...|+++++++||+++|++.....+..          ...... ..+.+++.+|+|+++++.+|++.
T Consensus       158 a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~----------~~~~~~-~~~~~~~~~~~~ia~~~~~l~~~  226 (245)
T PRK12936        158 GMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQ----------KEAIMG-AIPMKRMGTGAEVASAVAYLASS  226 (245)
T ss_pred             HHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHH----------HHHHhc-CCCCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999999765432110          000111 12347788999999999999988


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+++.+|||...
T Consensus       227 ~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12936        227 EAAYVTGQTIHVNGGMAM  244 (245)
T ss_pred             cccCcCCCEEEECCCccc
Confidence            778999999999999764

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.8e-39  Score=298.83  Aligned_cols=249  Identities=33%  Similarity=0.502  Sum_probs=214.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .++|+++||||++|||+++|+.|+++|++|++++|+.+.+++..+++.  .++.++.+|+++++++.++++++.++++++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG--PDHHALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999999999888877766653  356788999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCc-eEEEEccccccccCCCCccchhhHHH
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g-~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      |++|||||+..+...++.+.+.++|++++++|+.+++.++++++|.|++++.| +||++||..+..+.+++..|+++|+|
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaa  160 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAA  160 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHH
Confidence            99999999854322567789999999999999999999999999999776655 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++|+++++.|+.++||+|++|+||+++|++...........      .... .+ ..+.+++.+|+++++++.+|+++.
T Consensus       161 l~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~------~~~~-~~-~~~~~~~~~~~~va~~v~~l~~~~  232 (520)
T PRK06484        161 VISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLD------PSAV-RS-RIPLGRLGRPEEIAEAVFFLASDQ  232 (520)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhh------hHHH-Hh-cCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999876532211100      0111 11 122377889999999999999988


Q ss_pred             CCceeecEEEeCCCcccccC
Q 023553          255 ARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~~~  274 (280)
                      ..+++|+.+.+|||+.....
T Consensus       233 ~~~~~G~~~~~~gg~~~~~~  252 (520)
T PRK06484        233 ASYITGSTLVVDGGWTVYGG  252 (520)
T ss_pred             ccCccCceEEecCCeecccc
Confidence            89999999999999876554

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=271.52  Aligned_cols=244  Identities=34%  Similarity=0.560  Sum_probs=207.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .++||+++||||++|||++++++|+++|++|++++|+.+..++..+.+.    ..++.||++++++++++++++.+.+++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG----GLFVPTDVTDEDAVNALFDTAAETYGS   79 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----CcEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999999877666655543    247889999999999999999998899


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC-CCccchhhHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~-~~~~Y~~sK~  173 (280)
                      +|++|||||...+....+.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+ +...|+++|+
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKa  159 (255)
T PRK06057         80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKG  159 (255)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHH
Confidence            999999999864322457788999999999999999999999999999877789999999988777653 6788999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +++++++.++.++.++||+|++|+||+++|++..........  .    ...... . .+.+++.+|+|+++++.+|++.
T Consensus       160 al~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~--~----~~~~~~-~-~~~~~~~~~~~~a~~~~~l~~~  231 (255)
T PRK06057        160 GVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPE--R----AARRLV-H-VPMGRFAEPEEIAAAVAFLASD  231 (255)
T ss_pred             HHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHH--H----HHHHHh-c-CCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999987654332111  0    111111 1 2247899999999999999998


Q ss_pred             CCCceeecEEEeCCCcc
Q 023553          254 EARYISGTNLMVDGGFT  270 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++|+.+.+|||..
T Consensus       232 ~~~~~~g~~~~~~~g~~  248 (255)
T PRK06057        232 DASFITASTFLVDGGIS  248 (255)
T ss_pred             cccCccCcEEEECCCee
Confidence            88999999999999975

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=2.3e-38  Score=266.63  Aligned_cols=232  Identities=31%  Similarity=0.482  Sum_probs=192.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .+++|++|||||++|||+++++.|+++|++|+++.++ .+..+++.+..    .+.++.+|+++++++.++++    .++
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~----~~~~~~~D~~~~~~~~~~~~----~~~   74 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET----GATAVQTDSADRDAVIDVVR----KSG   74 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh----CCeEEecCCCCHHHHHHHHH----HhC
Confidence            4789999999999999999999999999999888764 44444443333    24567899999998876664    357


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-~~~~~~~~Y~~sK  172 (280)
                      ++|++|||||....  .+..+.+.++|++.+++|+.+++.+++.+++.|.+  .+++|++||..+. .+.++...|+++|
T Consensus        75 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sK  150 (237)
T PRK12742         75 ALDILVVNAGIAVF--GDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASK  150 (237)
T ss_pred             CCcEEEECCCCCCC--CCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhH
Confidence            89999999998654  56678899999999999999999999999999853  5899999998884 5678889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++++.+++.++.++.++||+|++|+||+++|++.....+           ..+...... +.+++.+|+|+++++.||++
T Consensus       151 aa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-----------~~~~~~~~~-~~~~~~~p~~~a~~~~~l~s  218 (237)
T PRK12742        151 SALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP-----------MKDMMHSFM-AIKRHGRPEEVAGMVAWLAG  218 (237)
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH-----------HHHHHHhcC-CCCCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999998543211           111111222 34789999999999999999


Q ss_pred             CCCCceeecEEEeCCCcc
Q 023553          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      +...+++|+.+.+|||+.
T Consensus       219 ~~~~~~~G~~~~~dgg~~  236 (237)
T PRK12742        219 PEASFVTGAMHTIDGAFG  236 (237)
T ss_pred             cccCcccCCEEEeCCCcC
Confidence            989999999999999964

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=271.16  Aligned_cols=254  Identities=30%  Similarity=0.435  Sum_probs=213.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||+++||+++++.|+++|++|++++|+++..++..+.+.. ..++.++.+|+++.+++.++++.+.+++
T Consensus         3 ~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          3 SNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999998877776666543 2467789999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhc-ccCCCceEEEEccccccccCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIM-IPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||....  ..+.+.+.+++++.+++|+.+++.+++.+++.| ++.+.++||++||..+..+.+....|+++
T Consensus        83 ~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~s  160 (262)
T PRK13394         83 GSVDILVSNAGIQIV--NPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTA  160 (262)
T ss_pred             CCCCEEEECCccCCC--CchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHH
Confidence            999999999998754  667788899999999999999999999999999 66667899999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh--hhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE--DAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      |++++++++.++.++++.||+++++.||+++|++.....+......  ...+....++... ...+++++++|+++++++
T Consensus       161 k~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~a~~~  239 (262)
T PRK13394        161 KHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGK-TVDGVFTTVEDVAQTVLF  239 (262)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcC-CCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999998654432211100  0001111222222 224789999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcc
Q 023553          250 LASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++.....++|+.+.+|||+.
T Consensus       240 l~~~~~~~~~g~~~~~~~g~~  260 (262)
T PRK13394        240 LSSFPSAALTGQSFVVSHGWF  260 (262)
T ss_pred             HcCccccCCcCCEEeeCCcee
Confidence            998777789999999999974

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.8e-39  Score=268.57  Aligned_cols=232  Identities=33%  Similarity=0.510  Sum_probs=196.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.....        ..++.++.+|++++      ++++.+.+++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~~~D~~~~------~~~~~~~~~~   67 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------SGNFHFLQLDLSDD------LEPLFDWVPS   67 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------CCcEEEEECChHHH------HHHHHHhhCC
Confidence            578999999999999999999999999999999999854311        23577889999987      4455556689


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|++
T Consensus        68 id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  146 (235)
T PRK06550         68 VDILCNTAGILDDY-KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHA  146 (235)
T ss_pred             CCEEEECCCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHH
Confidence            99999999976432 56778899999999999999999999999999988778999999999999998999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++++++++.++.++||++++|+||+++|++....++...        ......+. .+.+++.+|+|+|+++++|+++.
T Consensus       147 ~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~a~~~~~l~s~~  217 (235)
T PRK06550        147 LAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGG--------LADWVARE-TPIKRWAEPEEVAELTLFLASGK  217 (235)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchH--------HHHHHhcc-CCcCCCCCHHHHHHHHHHHcChh
Confidence            9999999999999999999999999999998654433211        11111222 23488999999999999999988


Q ss_pred             CCceeecEEEeCCCcc
Q 023553          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+++.+|||++
T Consensus       218 ~~~~~g~~~~~~gg~~  233 (235)
T PRK06550        218 ADYMQGTIVPIDGGWT  233 (235)
T ss_pred             hccCCCcEEEECCcee
Confidence            8899999999999964

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-38  Score=269.87  Aligned_cols=245  Identities=33%  Similarity=0.502  Sum_probs=209.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|+++||||+++||+++|++|+++|++|++++|+.+.++...+.+.. ..++.++.||+++++++.++++++.+.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999999998777666655543 2467789999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHh-cccCCCceEEEEccccccccCCC----Ccc
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI-MIPQTKGTIISICSVAGAIGGLG----PHA  167 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l~~~~~g~iv~isS~~~~~~~~~----~~~  167 (280)
                      +++|++|||||....  .+..+.+.++|++++++|+.+++.+++++.+. |.+++.++||++||..+..+.++    ...
T Consensus        88 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~  165 (259)
T PRK08213         88 GHVDILVNNAGATWG--APAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIA  165 (259)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcch
Confidence            999999999998654  56778899999999999999999999999998 76666789999999887766544    489


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |+++|++++.++++++.++.++||++++++||+++|++.....+.          +........ +..++.+++|+++++
T Consensus       166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~----------~~~~~~~~~-~~~~~~~~~~va~~~  234 (259)
T PRK08213        166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLER----------LGEDLLAHT-PLGRLGDDEDLKGAA  234 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHH----------HHHHHHhcC-CCCCCcCHHHHHHHH
Confidence            999999999999999999999999999999999999986543321          111112222 347788999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCccc
Q 023553          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .+|++....+++|+.+.+|||...
T Consensus       235 ~~l~~~~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        235 LLLASDASKHITGQILAVDGGVSA  258 (259)
T ss_pred             HHHhCccccCccCCEEEECCCeec
Confidence            999999899999999999999754

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.9e-38  Score=269.13  Aligned_cols=248  Identities=30%  Similarity=0.483  Sum_probs=212.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +++|++|||||+++||++++++|+++|++|++++|+.+..++..+.+.. ..++.++.+|+++.+++.++++.+.+++++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999998877666555432 346888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++||++|....  .++.+.+.++|++++++|+.+++.+++.+++.|++.+.++|+++||..+..+.++...|+.+|+|
T Consensus        81 ~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a  158 (250)
T TIGR03206        81 VDVLVNNAGWDKF--GPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGG  158 (250)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHH
Confidence            9999999998644  67778899999999999999999999999999987777999999999999998999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      ++.+++++++++.+.||+++.++||+++|++.............    ........ .+.+++.+|+|+|+++.++++.+
T Consensus       159 ~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~dva~~~~~l~~~~  233 (250)
T TIGR03206       159 LVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEK----LREAFTRA-IPLGRLGQPDDLPGAILFFSSDD  233 (250)
T ss_pred             HHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHH----HHHHHHhc-CCccCCcCHHHHHHHHHHHcCcc
Confidence            99999999999998899999999999999986554321111111    11111122 23478899999999999999998


Q ss_pred             CCceeecEEEeCCCcc
Q 023553          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+++.+|||+.
T Consensus       234 ~~~~~g~~~~~~~g~~  249 (250)
T TIGR03206       234 ASFITGQVLSVSGGLT  249 (250)
T ss_pred             cCCCcCcEEEeCCCcc
Confidence            8899999999999964

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-38  Score=265.42  Aligned_cols=241  Identities=31%  Similarity=0.433  Sum_probs=204.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++||||+++||+++++.|+++|++|+++.|+.+ ..++..+.+.. ..++.++.+|+++.+++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999988877643 33444444322 3568889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|.+  .++||++||..+..+.+++..|+++|
T Consensus        82 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (245)
T PRK12937         82 GRIDVLVNNAGVMPL--GTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASK  157 (245)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHH
Confidence            999999999998754  67788899999999999999999999999999854  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++++.++++++.++.+.||++++++||+++|++........         ......+.. +.+++.+|+|+++.+++|++
T Consensus       158 ~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~d~a~~~~~l~~  227 (245)
T PRK12937        158 AAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAE---------QIDQLAGLA-PLERLGTPEEIAAAVAFLAG  227 (245)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHH---------HHHHHHhcC-CCCCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999854321111         111112222 33788999999999999999


Q ss_pred             CCCCceeecEEEeCCCc
Q 023553          253 DEARYISGTNLMVDGGF  269 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~  269 (280)
                      +...+++|+.+.+|||+
T Consensus       228 ~~~~~~~g~~~~~~~g~  244 (245)
T PRK12937        228 PDGAWVNGQVLRVNGGF  244 (245)
T ss_pred             ccccCccccEEEeCCCC
Confidence            88889999999999986

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-38  Score=278.55  Aligned_cols=226  Identities=25%  Similarity=0.325  Sum_probs=196.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.. ..++.++.+|++|++++.++++++.+.
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF   81 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence            4568899999999999999999999999999999999999888877766643 356788899999999999999999998


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||+...  .++.+.+.++|++++++|+.+++++++.++|+|++++.|+||+++|..+..+.++...|++|
T Consensus        82 ~g~iD~lVnnAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~as  159 (330)
T PRK06139         82 GGRIDVWVNNVGVGAV--GRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSAS  159 (330)
T ss_pred             cCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHH
Confidence            8999999999998765  77889999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCC-CeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          172 KHAVLGLNKNVAAELGKY-GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~-gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      |+|+.+|+++|+.|+.+. ||+|++|+||+++|++.........              ........+.+|+++|++++++
T Consensus       160 Kaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~--------------~~~~~~~~~~~pe~vA~~il~~  225 (330)
T PRK06139        160 KFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG--------------RRLTPPPPVYDPRRVAKAVVRL  225 (330)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc--------------ccccCCCCCCCHHHHHHHHHHH
Confidence            999999999999999874 8999999999999998654221100              0001114467999999999999


Q ss_pred             cCCC
Q 023553          251 ASDE  254 (280)
Q Consensus       251 ~s~~  254 (280)
                      +...
T Consensus       226 ~~~~  229 (330)
T PRK06139        226 ADRP  229 (330)
T ss_pred             HhCC
Confidence            8653

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-38  Score=264.67  Aligned_cols=221  Identities=19%  Similarity=0.244  Sum_probs=189.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+++||||++|||+++|+.|+++|++|++++|+.+.+++..+.+.. ..++..+.||++++++++++++++.++++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999999888777666643 34677789999999999999999999998


Q ss_pred             -CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023553           94 -TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        94 -~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       ++|++|||||..... .++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ .|+||++||..+.   +++..|+++
T Consensus        82 ~~iD~li~nag~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~as  157 (227)
T PRK08862         82 RAPDVLVNNWTSSPLP-SLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESS  157 (227)
T ss_pred             CCCCEEEECCccCCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHH
Confidence             999999999865332 5788899999999999999999999999999997654 6899999997654   567899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+.+|+++++.|++++||+||+|+||+++|+...  .++   .+.      ..             -+|++.+..||+
T Consensus       158 Kaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~--~~~---~~~------~~-------------~~~~~~~~~~l~  213 (227)
T PRK08862        158 NALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL--DAV---HWA------EI-------------QDELIRNTEYIV  213 (227)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc--CHH---HHH------HH-------------HHHHHhheeEEE
Confidence            999999999999999999999999999999998311  111   111      00             179999999999


Q ss_pred             CCCCCceeecEEEe
Q 023553          252 SDEARYISGTNLMV  265 (280)
Q Consensus       252 s~~~~~~~G~~i~~  265 (280)
                      +  +.|+||+.+..
T Consensus       214 ~--~~~~tg~~~~~  225 (227)
T PRK08862        214 A--NEYFSGRVVEA  225 (227)
T ss_pred             e--cccccceEEee
Confidence            6  67999998864

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.9e-38  Score=268.91  Aligned_cols=225  Identities=21%  Similarity=0.247  Sum_probs=193.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      |+++||||++|||+++|++|+ +|++|++++|+.+.+++..+++...  ..+.++.||++|++++.++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 5999999999998888877776532  2477889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      ++|||||+...  ..+.+.+.+++.+++++|+.+++.+++.++|.|.+++ +|+||++||.++..+.++...|++||+|+
T Consensus        80 ~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~  157 (246)
T PRK05599         80 LAVVAFGILGD--QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGL  157 (246)
T ss_pred             EEEEecCcCCC--chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHH
Confidence            99999998654  4455677788999999999999999999999997664 69999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      ++|+++++.|+.++||+|++++||+++|++.....+.                      ....+|+|+|++++++++...
T Consensus       158 ~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~----------------------~~~~~pe~~a~~~~~~~~~~~  215 (246)
T PRK05599        158 DAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA----------------------PMSVYPRDVAAAVVSAITSSK  215 (246)
T ss_pred             HHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC----------------------CCCCCHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999985432211                      113589999999999997643


Q ss_pred             CceeecEEEeCCCccc
Q 023553          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      .   +..+.++++...
T Consensus       216 ~---~~~~~~~~~~~~  228 (246)
T PRK05599        216 R---STTLWIPGRLRV  228 (246)
T ss_pred             C---CceEEeCccHHH
Confidence            2   556777777643

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=2.2e-38  Score=270.11  Aligned_cols=239  Identities=18%  Similarity=0.200  Sum_probs=195.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHH----cCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           20 VALITGGATGIGESTVRLFHK----HGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~----~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++||||++|||+++|++|++    .|++|++++|+.+.+++..+++..   ...+.++.+|++++++++++++.+.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    799999999998888877766643   3467889999999999999999998877


Q ss_pred             CCc----cEEEECCCCCCCCCCCCCCC-CHHHHHHHhhhhhhhHHHHHHHHHHhcccCC--CceEEEEccccccccCCCC
Q 023553           93 GTL----DIMVNNAGISGAPCPDIREA-DLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        93 g~i----d~li~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~isS~~~~~~~~~~  165 (280)
                      +.+    |++|||||+.........+. +.++|++++++|+.+++.+++.++|.|+++.  .++||++||..+..+.+++
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence            643    69999999864321223333 5789999999999999999999999997653  4799999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHH
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|++||+|+++|+++++.|++++||+|++|+||+++|++.....+....     +..........+ .+++.+|+|+|+
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~p~eva~  235 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVD-----PDMRKGLQELKA-KGKLVDPKVSAQ  235 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCC-----hhHHHHHHHHHh-cCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999987543221100     001111222222 388999999999


Q ss_pred             HHHHhcCCCCCceeecEEEe
Q 023553          246 AVLFLASDEARYISGTNLMV  265 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~  265 (280)
                      .+++|++ +.+++||+++.+
T Consensus       236 ~~~~l~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       236 KLLSLLE-KDKFKSGAHVDY  254 (256)
T ss_pred             HHHHHHh-cCCcCCcceeec
Confidence            9999996 467999999875

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=4.5e-38  Score=265.19  Aligned_cols=236  Identities=22%  Similarity=0.397  Sum_probs=201.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      ++||||++|||+++|+.|+++|++|++++|+. +..+...+.+.. ..++.++.+|+++++++.++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999988753 445555554432 3568889999999999999999999889999999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHH-HhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA-RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      |||+|+...  .++.+.+.++|+.++++|+.++++++++++ |.+.+++.++||++||..+..+.++...|+++|++++.
T Consensus        81 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  158 (239)
T TIGR01831        81 VLNAGITRD--AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIG  158 (239)
T ss_pred             EECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence            999998765  567788999999999999999999999875 44454567899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCc
Q 023553          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~  257 (280)
                      ++++++.|+..+||++++++||+++|++.....+.          ..... + ..+.+++.+|+|++++++||+++...+
T Consensus       159 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~-~-~~~~~~~~~~~~va~~~~~l~~~~~~~  226 (239)
T TIGR01831       159 ATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD----------LDEAL-K-TVPMNRMGQPAEVASLAGFLMSDGASY  226 (239)
T ss_pred             HHHHHHHHHhHhCeEEEEEEEccCccccchhhhHH----------HHHHH-h-cCCCCCCCCHHHHHHHHHHHcCchhcC
Confidence            99999999999999999999999999987543211          11111 1 233488999999999999999998899


Q ss_pred             eeecEEEeCCCcc
Q 023553          258 ISGTNLMVDGGFT  270 (280)
Q Consensus       258 ~~G~~i~~dgG~~  270 (280)
                      ++|+.+.+|||..
T Consensus       227 ~~g~~~~~~gg~~  239 (239)
T TIGR01831       227 VTRQVISVNGGMV  239 (239)
T ss_pred             ccCCEEEecCCcC
Confidence            9999999999963

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.4e-38  Score=265.60  Aligned_cols=244  Identities=32%  Similarity=0.497  Sum_probs=205.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCCC---CCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGE---PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++||||++|||+++++.|+++|++|++++|+ .+.+++..+.+...   ..+..+.+|+++++++.++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 66566655554321   2345678999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||....  ..+.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||..+..+.+++..|+++|++++
T Consensus        82 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~  159 (251)
T PRK07069         82 VLVNNAGVGSF--GAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVA  159 (251)
T ss_pred             EEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHH
Confidence            99999998765  6778889999999999999999999999999998877899999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCC--eEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          177 GLNKNVAAELGKYG--IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       177 ~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      .++++++.|+..++  |+|++|+||+++|++.......... .   +.+..+ .+. .+.+++.+|+|+++++++|+++.
T Consensus       160 ~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~-~---~~~~~~-~~~-~~~~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        160 SLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGE-E---EATRKL-ARG-VPLGRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             HHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccc-h---hHHHHH-hcc-CCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999997765  9999999999999987543211000 0   111111 122 23378899999999999999988


Q ss_pred             CCceeecEEEeCCCcccc
Q 023553          255 ARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~  272 (280)
                      ..+++|+.+.+|||+..|
T Consensus       234 ~~~~~g~~i~~~~g~~~~  251 (251)
T PRK07069        234 SRFVTGAELVIDGGICAM  251 (251)
T ss_pred             ccCccCCEEEECCCeecC
Confidence            889999999999997653

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=5.3e-38  Score=267.36  Aligned_cols=240  Identities=27%  Similarity=0.427  Sum_probs=200.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++|+++||||++|||+++|+.|+++|++|++++|+.+..++..+.+..   ...+.++.||+++++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999999999998887777666532   2345667999999999999999999999


Q ss_pred             CCccEEEECCCCCCC-CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC--------
Q 023553           93 GTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL--------  163 (280)
Q Consensus        93 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~--------  163 (280)
                      +++|++|||||.... ....+.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+..        
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence            999999999986532 12467789999999999999999999999999999888788999999988764321        


Q ss_pred             --CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHH
Q 023553          164 --GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       164 --~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                        ....|++||+++++++++++.++.++||+|++++||.+.++.....             ...+ ... .+..++.+|+
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~-------------~~~~-~~~-~~~~~~~~~~  226 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAF-------------LNAY-KKC-CNGKGMLDPD  226 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHH-------------HHHH-Hhc-CCccCCCCHH
Confidence              1246999999999999999999999999999999999877641110             0011 111 1236789999


Q ss_pred             HHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          242 DVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       242 dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+|+++++++++...+++|+.+.+|||+.
T Consensus       227 dva~~~~~l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        227 DICGTLVFLLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             HhhhhHhheeccccccccCceEEecCCcc
Confidence            99999999999888899999999999964

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-38  Score=265.87  Aligned_cols=253  Identities=36%  Similarity=0.508  Sum_probs=213.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +++|+++||||+++||++++++|+++|++|++++|+.+..++..+.+.. ..++.++.||+++++++.++++++.+.+++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999998887776666543 357888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||....  ..+.+.+.+++++.+++|+.+++.+++.+++.|++++.++||++||..+..+.++...|+++|++
T Consensus        82 ~d~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a  159 (258)
T PRK12429         82 VDILVNNAGIQHV--APIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHG  159 (258)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHH
Confidence            9999999998755  67788899999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhh--hhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT--EDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++.+++.++.++.+.||++++++||+++|++.....+.....  .............. .+.+++++++|+|+++++|++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~~~~~l~~  238 (258)
T PRK12429        160 LIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPL-VPQKRFTTVEEIADYALFLAS  238 (258)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhcc-CCccccCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999865433221100  00000011111111 223789999999999999998


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      .....++|+++.+|||++.
T Consensus       239 ~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        239 FAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             ccccCccCCeEEeCCCEec
Confidence            7777889999999999763

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-38  Score=266.95  Aligned_cols=246  Identities=25%  Similarity=0.378  Sum_probs=195.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc----chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD----NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~----~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      ++++++|+++||||++|||+++|+.|+++|++|+++.++.    +..++..+.+.. ..++.++.+|+++++++.+++++
T Consensus         3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence            3457899999999999999999999999999977765432    333344444332 24678889999999999999999


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEE-ccccccccCCCCc
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISI-CSVAGAIGGLGPH  166 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~i-sS~~~~~~~~~~~  166 (280)
                      +.+.++++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+  .++++++ +|..+ .+.+.+.
T Consensus        83 ~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~-~~~~~~~  157 (257)
T PRK12744         83 AKAAFGRPDIAINTVGKVLK--KPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLG-AFTPFYS  157 (257)
T ss_pred             HHHhhCCCCEEEECCcccCC--CCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhc-ccCCCcc
Confidence            99999999999999998754  67788899999999999999999999999999854  4777776 44433 3457789


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccC-CCCCCCHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-QGTELTANDVAN  245 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~  245 (280)
                      .|++||+|+++|++++++|+.++||+|++++||++.|++...........      .........++ ..++.+|+|+++
T Consensus       158 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~  231 (257)
T PRK12744        158 AYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVA------YHKTAAALSPFSKTGLTDIEDIVP  231 (257)
T ss_pred             cchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhh------cccccccccccccCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999764422111000      00000111111 137899999999


Q ss_pred             HHHHhcCCCCCceeecEEEeCCCcc
Q 023553          246 AVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++++|++. ..+++|+++.+|||+.
T Consensus       232 ~~~~l~~~-~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        232 FIRFLVTD-GWWITGQTILINGGYT  255 (257)
T ss_pred             HHHHhhcc-cceeecceEeecCCcc
Confidence            99999985 6799999999999965

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-37  Score=267.49  Aligned_cols=248  Identities=30%  Similarity=0.350  Sum_probs=211.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++++|++||||++++||+++++.|+++|++|++++|+.+..+...+.+..   ..++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            347799999999999999999999999999999999998776665555432   24678889999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||..... .++.+.+.++|.+++++|+.+++.+++++++.|.+++.++|+++||..+..+.++..+|++
T Consensus        83 ~~~~~d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  161 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETI-GPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGV  161 (276)
T ss_pred             HcCCCCEEEECCCcccCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHH
Confidence            999999999999976432 5677789999999999999999999999999998777899999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|++++.+++.++.++...||++++|.||+++|++..........       ...+. . ..+.+++++++|+++++++|
T Consensus       162 sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~-------~~~~~-~-~~~~~~~~~~~dva~~~~~l  232 (276)
T PRK05875        162 TKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPEL-------SADYR-A-CTPLPRVGEVEDVANLAMFL  232 (276)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHH-------HHHHH-c-CCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999987543321110       01111 1 22347889999999999999


Q ss_pred             cCCCCCceeecEEEeCCCccc
Q 023553          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++....+++|+++.+|||...
T Consensus       233 ~~~~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        233 LSDAASWITGQVINVDGGHML  253 (276)
T ss_pred             cCchhcCcCCCEEEECCCeec
Confidence            998888899999999999764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.5e-37  Score=262.68  Aligned_cols=241  Identities=30%  Similarity=0.464  Sum_probs=205.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .|+++||||+++||+++|+.|+++|++|++++|+.+ ..++...... ...++.++.+|+++++++.++++.+.++++++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            368999999999999999999999999999999854 2222323222 23468889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||+|....  ..+.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|+++|+|+
T Consensus        82 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~  159 (245)
T PRK12824         82 DILVNNAGITRD--SVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGM  159 (245)
T ss_pred             CEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHH
Confidence            999999998754  678889999999999999999999999999999877789999999999998888999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      +++++.++.++.++||+++++.||++.|++.+...+.          ....... ..+.+.+.+++|+++++.+|++...
T Consensus       160 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~va~~~~~l~~~~~  228 (245)
T PRK12824        160 IGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPE----------VLQSIVN-QIPMKRLGTPEEIAAAVAFLVSEAA  228 (245)
T ss_pred             HHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHH----------HHHHHHh-cCCCCCCCCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999999986543221          1111111 2234788899999999999998888


Q ss_pred             CceeecEEEeCCCccc
Q 023553          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      .+++|+.+.+|||+.+
T Consensus       229 ~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        229 GFITGETISINGGLYM  244 (245)
T ss_pred             cCccCcEEEECCCeec
Confidence            8999999999999854

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-38  Score=261.42  Aligned_cols=215  Identities=23%  Similarity=0.257  Sum_probs=180.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +++||||++|||+++++.|+++|++|++++|+.+++++..+.+    .+.++.||+++++++.++++.+.   +++|++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~---~~id~lv   74 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL----DVDAIVCDNTDPASLEEARGLFP---HHLDTIV   74 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCcEEecCCCCHHHHHHHHHHHh---hcCcEEE
Confidence            5899999999999999999999999999999988776665544    24578899999999998887764   3799999


Q ss_pred             ECCCCCCCC----CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023553          100 NNAGISGAP----CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus       100 ~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      ||||.....    ...+.+ +.++|++++++|+.++++++++++|.|++  .|+||+++|.+    .+....|++||+|+
T Consensus        75 ~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKaal  147 (223)
T PRK05884         75 NVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKAAL  147 (223)
T ss_pred             ECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHHHH
Confidence            999853210    013334 57899999999999999999999999954  58999999976    35668999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      ++|+++++.|++++||+||+|+||+++|++.....                   ..    ...+|+|+++.+.||+++.+
T Consensus       148 ~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~-------------------~~----p~~~~~~ia~~~~~l~s~~~  204 (223)
T PRK05884        148 SNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS-------------------RT----PPPVAAEIARLALFLTTPAA  204 (223)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc-------------------CC----CCCCHHHHHHHHHHHcCchh
Confidence            99999999999999999999999999998632110                   00    12389999999999999989


Q ss_pred             CceeecEEEeCCCccc
Q 023553          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      .+++|+++.+|||+..
T Consensus       205 ~~v~G~~i~vdgg~~~  220 (223)
T PRK05884        205 RHITGQTLHVSHGALA  220 (223)
T ss_pred             hccCCcEEEeCCCeec
Confidence            9999999999999863

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-37  Score=262.13  Aligned_cols=231  Identities=21%  Similarity=0.276  Sum_probs=200.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCC--HHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTK--EEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~--~~~~~~~~~~~~~   90 (280)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++..  ...+.++.+|+++  .+++.++++++.+
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999877776666532  2356678899975  6788999999998


Q ss_pred             Hh-CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           91 KF-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .+ +++|++|||||..... .++.+.+.++|++.+++|+.+++.++++++|.|.+.+.+++++++|..+..+.++...|+
T Consensus        83 ~~~~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~  161 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYAL-SPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFG  161 (239)
T ss_pred             HhCCCCCEEEEeccccccC-CCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchH
Confidence            88 8999999999976432 567889999999999999999999999999999877779999999999999988899999


Q ss_pred             hhHHHHHHHHHHHHHHHCCC-CeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKY-GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~-gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      +||+|++.|++.++.|+.++ +|+|++|.||+++|++.....+....                   ..+.+++|++++++
T Consensus       162 ~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~  222 (239)
T PRK08703        162 ASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAK-------------------SERKSYGDVLPAFV  222 (239)
T ss_pred             HhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCCc-------------------cccCCHHHHHHHHH
Confidence            99999999999999999887 69999999999999986654332111                   23568999999999


Q ss_pred             HhcCCCCCceeecEEEe
Q 023553          249 FLASDEARYISGTNLMV  265 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~  265 (280)
                      +++++.+.++||+++.+
T Consensus       223 ~~~~~~~~~~~g~~~~~  239 (239)
T PRK08703        223 WWASAESKGRSGEIVYL  239 (239)
T ss_pred             HHhCccccCcCCeEeeC
Confidence            99999999999999864

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-38  Score=268.93  Aligned_cols=236  Identities=28%  Similarity=0.350  Sum_probs=195.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+++||||++|||+++|+.|+++|++|++++|+.+.+++..+++... .++.++.||+++++++.++++++.+.++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999988877776666432 4678889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|.+++ .|+||++||.++..+.++...|++||
T Consensus        83 ~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (275)
T PRK05876         83 HVDVVFSNAGIVVG--GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAK  160 (275)
T ss_pred             CCCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHH
Confidence            99999999998755  7788999999999999999999999999999997665 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+.+|+++|+.|++++||+|++|+||+++|++.............. . .........+....+.+|+|+|++++..+.
T Consensus       161 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~dva~~~~~ai~  238 (275)
T PRK05876        161 YGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQ-S-STTGSPGPLPLQDDNLGVDDIAQLTADAIL  238 (275)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccc-c-ccccccccccccccCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999864421110000000 0 000000001112457899999999998885


Q ss_pred             CC
Q 023553          253 DE  254 (280)
Q Consensus       253 ~~  254 (280)
                      ..
T Consensus       239 ~~  240 (275)
T PRK05876        239 AN  240 (275)
T ss_pred             cC
Confidence            43

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.7e-37  Score=266.13  Aligned_cols=240  Identities=28%  Similarity=0.415  Sum_probs=191.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC--CCCeEEEecCCCCHHHH----HHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG--EPDTFFCHCDVTKEEDV----CSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~----~~~~~~~~~~   91 (280)
                      ++++||||++|||+++++.|+++|++|++++|+ .+.+++..+.+..  .....++.+|++|++++    .++++.+.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999998764 4556555555532  23566789999999865    4556666677


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCH-----------HHHHHHhhhhhhhHHHHHHHHHHhcccC------CCceEEEEc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADL-----------SEFEKVFDINVKGVFHGMKHAARIMIPQ------TKGTIISIC  154 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~g~iv~is  154 (280)
                      ++++|+||||||....  .++.+.+.           ++|.+++++|+.+++.++++++|.|+..      ..+.|++++
T Consensus        82 ~g~iD~lv~nAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        82 FGRCDVLVNNASAFYP--TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             cCCceEEEECCccCCC--CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence            8999999999998654  34433333           3699999999999999999999998543      246899999


Q ss_pred             cccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCC
Q 023553          155 SVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ  234 (280)
Q Consensus       155 S~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (280)
                      |..+..+.+++.+|++||+|+++|+++++.|+.++||+|++|+||+++|+...   +...        ...+. ...++.
T Consensus       160 s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~---~~~~--------~~~~~-~~~~~~  227 (267)
T TIGR02685       160 DAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM---PFEV--------QEDYR-RKVPLG  227 (267)
T ss_pred             hhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc---chhH--------HHHHH-HhCCCC
Confidence            99998888899999999999999999999999999999999999999876321   1110        11111 112232


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       235 ~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      .++.+|+|+++++++|+++...+++|+.+.+|||+...
T Consensus       228 ~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       228 QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceecc
Confidence            47889999999999999998999999999999998764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3.6e-37  Score=260.97  Aligned_cols=242  Identities=33%  Similarity=0.558  Sum_probs=204.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++||||++|||++++++|+++|++|+++.+ +++..++..+.+... .++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            367999999999999999999999999999987655 445555554554332 468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||....  ..+.+.+.+++++.+++|+.+++.+++.++|.|.+.+.+++|++||..+..+.+++..|+++|
T Consensus        83 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  160 (247)
T PRK12935         83 GKVDILVNNAGITRD--RTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAK  160 (247)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHH
Confidence            999999999998755  667788999999999999999999999999999877778999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+++++++++.++.+.||+++.++||+++|++..... ...        ...+. .. ...+.+..|+|++++++++++
T Consensus       161 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~-~~~--------~~~~~-~~-~~~~~~~~~edva~~~~~~~~  229 (247)
T PRK12935        161 AGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP-EEV--------RQKIV-AK-IPKKRFGQADEIAKGVVYLCR  229 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc-HHH--------HHHHH-Hh-CCCCCCcCHHHHHHHHHHHcC
Confidence            99999999999999989999999999999998765421 110        11111 11 123678999999999999997


Q ss_pred             CCCCceeecEEEeCCCcc
Q 023553          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      .. .+++|+.+.+|||..
T Consensus       230 ~~-~~~~g~~~~i~~g~~  246 (247)
T PRK12935        230 DG-AYITGQQLNINGGLY  246 (247)
T ss_pred             cc-cCccCCEEEeCCCcc
Confidence            53 589999999999963

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.2e-37  Score=261.83  Aligned_cols=244  Identities=27%  Similarity=0.356  Sum_probs=205.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .|+++||||+++||++++++|+++|++|++++|+.+ ..++..+.+.. ..++.++.+|+++++++.++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            589999999999999999999999999999998743 33444444432 3468889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC------CceEEEEccccccccCCCCccch
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      |++|||||.......++.+.+.++|++.+++|+.+++.+++++++.|.++.      .++|+++||..+..+.++...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            999999998654335678889999999999999999999999999997654      35799999999999888999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      ++|++++++++.++.++.++||++++++||.+.|++.......          ......+...+.+++.+|+|+++++.+
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~d~a~~i~~  231 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAK----------YDALIAKGLVPMPRWGEPEDVARAVAA  231 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchh----------HHhhhhhcCCCcCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999875432111          111111112334788999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++....+++|+++.+|||...
T Consensus       232 l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        232 LASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             HhCCcccccCCCEEEECCCeec
Confidence            9988888899999999999764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=4e-37  Score=259.62  Aligned_cols=239  Identities=31%  Similarity=0.457  Sum_probs=205.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      |++|||||+++||+.++++|+++|++|+++.| +.+..++..+.... ..++.++.+|+++++++.++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            78999999999999999999999999999888 55545444444332 34688899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||...+  ..+.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+++..|+++|++++
T Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~  158 (242)
T TIGR01829        81 VLVNNAGITRD--ATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMI  158 (242)
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence            99999998755  6678889999999999999999999999999998877789999999999988899999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~  256 (280)
                      .+++.++.++.+.||+++++.||+++|++.....+..         ...+ ... .+.+++.+|+++++++.+|++.+..
T Consensus       159 ~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---------~~~~-~~~-~~~~~~~~~~~~a~~~~~l~~~~~~  227 (242)
T TIGR01829       159 GFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDV---------LNSI-VAQ-IPVGRLGRPEEIAAAVAFLASEEAG  227 (242)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHH---------HHHH-Hhc-CCCCCCcCHHHHHHHHHHHcCchhc
Confidence            9999999999999999999999999999865432210         1111 112 2347889999999999999988788


Q ss_pred             ceeecEEEeCCCcc
Q 023553          257 YISGTNLMVDGGFT  270 (280)
Q Consensus       257 ~~~G~~i~~dgG~~  270 (280)
                      +++|+.+.+|||..
T Consensus       228 ~~~G~~~~~~gg~~  241 (242)
T TIGR01829       228 YITGATLSINGGLY  241 (242)
T ss_pred             CccCCEEEecCCcc
Confidence            99999999999974

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-37  Score=260.22  Aligned_cols=245  Identities=28%  Similarity=0.414  Sum_probs=206.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|+++||||+++||++++++|+++|++|++++|+.+..++..+.+.. ...+.++.+|+++.+++.++++++.+.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999998776666555532 2467788999999999999999999999


Q ss_pred             CCccEEEECCCCCCC-CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||+... ...++.+.+.+++++.+++|+.+++.++++++|.|.+.+.++||++||..++.   +...|++|
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~s  158 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLA  158 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHH
Confidence            999999999998753 12567788999999999999999999999999999877789999999988764   45789999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++.+++++++++...||++++++||.++|++.....+...        .....++ .+ ...+.+|+|+++++++++
T Consensus       159 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~--------~~~~~~~-~~-~~~~~~~~d~a~~~~~~~  228 (250)
T PRK07774        159 KVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEF--------VADMVKG-IP-LSRMGTPEDLVGMCLFLL  228 (250)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHH--------HHHHHhc-CC-CCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999998765433210        1111121 22 356789999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +....+.+|+.+.+|||.++
T Consensus       229 ~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        229 SDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             ChhhhCcCCCEEEECCCeec
Confidence            87666789999999999764

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-37  Score=260.06  Aligned_cols=241  Identities=32%  Similarity=0.455  Sum_probs=199.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .|+++||||++|||+.+++.|+++|++|+++. |+.+..+...+.+.. ..++.++.||+++++++.++++++.+.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            47999999999999999999999999998765 555555555555432 3468889999999999999999999889999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC---CceEEEEccccccccCCC-Cccchhh
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLG-PHAYTGS  171 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~isS~~~~~~~~~-~~~Y~~s  171 (280)
                      |++|||||+.... .++.+.+.++|+.++++|+.+++.+++.+++.|..++   .++||++||.++..+.+. +..|++|
T Consensus        82 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06947         82 DALVNNAGIVAPS-MPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGS  160 (248)
T ss_pred             CEEEECCccCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhh
Confidence            9999999986542 4677889999999999999999999999999886543   578999999998887664 5689999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+++++|++++++++.++||+|+.+.||+++|++..... ....        ...... ..+.++..+|+|+++.+++++
T Consensus       161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~-~~~~--------~~~~~~-~~~~~~~~~~e~va~~~~~l~  230 (248)
T PRK06947        161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGG-QPGR--------AARLGA-QTPLGRAGEADEVAETIVWLL  230 (248)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccC-CHHH--------HHHHhh-cCCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999854311 0000        011111 223377889999999999999


Q ss_pred             CCCCCceeecEEEeCCCc
Q 023553          252 SDEARYISGTNLMVDGGF  269 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~  269 (280)
                      +....+++|+++.+|||.
T Consensus       231 ~~~~~~~~G~~~~~~gg~  248 (248)
T PRK06947        231 SDAASYVTGALLDVGGGR  248 (248)
T ss_pred             CccccCcCCceEeeCCCC
Confidence            988889999999999984

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-36  Score=258.26  Aligned_cols=241  Identities=32%  Similarity=0.449  Sum_probs=199.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      +|++|||||+++||++++++|+++|++|+++.++ ++..++..+.+.. ..++.++.||+++.+++.++++++.++++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999888744 4444444444432 2467789999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC---CceEEEEccccccccCCC-Cccchhh
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLG-PHAYTGS  171 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~isS~~~~~~~~~-~~~Y~~s  171 (280)
                      |++|||||..... .++.+.+.++|++++++|+.+++.+++++++.|.++.   .|+||++||..+..+.++ +..|+++
T Consensus        82 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06123         82 DALVNNAGILEAQ-MRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS  160 (248)
T ss_pred             CEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence            9999999986532 4577889999999999999999999999999986542   478999999998888776 4689999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+++++|++.++.++.++||++++++||++.|++....... .        ....... ..+.+++.+|+|+++++++++
T Consensus       161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~-~--------~~~~~~~-~~p~~~~~~~~d~a~~~~~l~  230 (248)
T PRK06123        161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEP-G--------RVDRVKA-GIPMGRGGTAEEVARAILWLL  230 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCH-H--------HHHHHHh-cCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999975432110 0        1111111 223477889999999999999


Q ss_pred             CCCCCceeecEEEeCCCc
Q 023553          252 SDEARYISGTNLMVDGGF  269 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~  269 (280)
                      +....+++|+++.+|||.
T Consensus       231 ~~~~~~~~g~~~~~~gg~  248 (248)
T PRK06123        231 SDEASYTTGTFIDVSGGR  248 (248)
T ss_pred             CccccCccCCEEeecCCC
Confidence            988889999999999973

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-36  Score=260.06  Aligned_cols=251  Identities=31%  Similarity=0.403  Sum_probs=209.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..+++|+++||||+++||+.++++|+++|++ |++++|+.+......+.+.. ..++.++.+|+++++++.++++.+.+.
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999 99999987766655555432 346778899999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|++||++|....  ..+.+.+.++|++++++|+.+++.+++++++.|.+++ .|++|++||..+..+.++...|++
T Consensus        82 ~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~  159 (260)
T PRK06198         82 FGRLDALVNAAGLTDR--GTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCA  159 (260)
T ss_pred             hCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHH
Confidence            9999999999998754  6677889999999999999999999999999996654 589999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc-chhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE-EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +|+++++++++++.++...||++++++||+++|++....... ....    ..+..... ...+.+++.+++|+++++.+
T Consensus       160 sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~a~~~~~  234 (260)
T PRK06198        160 SKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAP----DDWLEKAA-ATQPFGRLLDPDEVARAVAF  234 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCC----hHHHHHHh-ccCCccCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999974321100 0000    00111111 12234788999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |++....+++|+++.+|||.+.
T Consensus       235 l~~~~~~~~~G~~~~~~~~~~~  256 (260)
T PRK06198        235 LLSDESGLMTGSVIDFDQSVWG  256 (260)
T ss_pred             HcChhhCCccCceEeECCcccc
Confidence            9998888999999999999764

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-36  Score=257.48  Aligned_cols=243  Identities=29%  Similarity=0.466  Sum_probs=205.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++||||+++||+++|++|+++|+.|++. .|+.+..++..+.+.. ..++.++.+|++|++++.++++++.+.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999998775 6777666666555543 3467789999999999999999998887


Q ss_pred             ------CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           93 ------GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        93 ------g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                            +++|++||+||....  ..+.+.+.+.|++++++|+.+++++++.+++.|.+  .+++|++||..+..+.+++.
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~~~~~  158 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQ--GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGFTGSI  158 (254)
T ss_pred             ccccCCCCccEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCCCCCc
Confidence                  479999999998655  67788899999999999999999999999999844  47999999999998999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|+++|+|++.++++++.++.++|+++++++||+++|++.........        ...+.... ...+++.+++|++++
T Consensus       159 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~dva~~  229 (254)
T PRK12746        159 AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPE--------IRNFATNS-SVFGRIGQVEDIADA  229 (254)
T ss_pred             chHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChh--------HHHHHHhc-CCcCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999998765433211        11111121 223788899999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCcc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +.++++....+++|+.+.++||++
T Consensus       230 ~~~l~~~~~~~~~g~~~~i~~~~~  253 (254)
T PRK12746        230 VAFLASSDSRWVTGQIIDVSGGFC  253 (254)
T ss_pred             HHHHcCcccCCcCCCEEEeCCCcc
Confidence            999998877789999999999965

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.3e-36  Score=256.52  Aligned_cols=242  Identities=32%  Similarity=0.524  Sum_probs=202.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++++++|||+++|||+.+++.|+++|++|++++|+.++++...+.+.. ..++.++++|+++.+++.++++.+.+.++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999998877776666543 35678899999999999999999988889


Q ss_pred             CccEEEECCCCCCCCC------CCC-CCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCC
Q 023553           94 TLDIMVNNAGISGAPC------PDI-READLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        94 ~id~li~~ag~~~~~~------~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~~~~~~  165 (280)
                      ++|++|||||......      ..+ .+.+.++|+.++++|+.+++.+.+.++|.|.++ ..++|+++||.. ..+.++.
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~  160 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQ  160 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCC
Confidence            9999999999764310      112 677889999999999999999999999999765 457899998864 4677788


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHH
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|+++|+|+++++++++.++.++||+++++.||+++|++.....+..         ...+ .. ..+.+.+.+|+|+++
T Consensus       161 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~---------~~~~-~~-~~~~~~~~~~~~~a~  229 (253)
T PRK08217        161 TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEA---------LERL-EK-MIPVGRLGEPEEIAH  229 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHH---------HHHH-Hh-cCCcCCCcCHHHHHH
Confidence            999999999999999999999989999999999999999875433211         1111 11 223477889999999


Q ss_pred             HHHHhcCCCCCceeecEEEeCCCcc
Q 023553          246 AVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++.+|++  ..+++|+++.+|||++
T Consensus       230 ~~~~l~~--~~~~~g~~~~~~gg~~  252 (253)
T PRK08217        230 TVRFIIE--NDYVTGRVLEIDGGLR  252 (253)
T ss_pred             HHHHHHc--CCCcCCcEEEeCCCcc
Confidence            9999995  4588999999999985

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-36  Score=255.08  Aligned_cols=240  Identities=29%  Similarity=0.421  Sum_probs=202.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++++++|+++||||+++||+.+++.|+++|++|++++|+.+..++..+..    ...++.+|+++++++.++++.    
T Consensus         3 ~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~----   74 (245)
T PRK07060          3 MAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET----GCEPLRLDVGDDAAIRAALAA----   74 (245)
T ss_pred             cccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCeEEEecCCCHHHHHHHHHH----
Confidence            445688999999999999999999999999999999999987766655443    245678999999988776664    


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .+++|++|||||....  ..+.+.+.++|++.+++|+.+++.+++++++.+.+++ .++||++||..+..+.++...|+.
T Consensus        75 ~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~  152 (245)
T PRK07060         75 AGAFDGLVNCAGIASL--ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCA  152 (245)
T ss_pred             hCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHH
Confidence            5789999999998654  6677789999999999999999999999999987554 489999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|++++.+++.++.++.+.||+++++.||+++|++..........       ...+. .. .+.+++.+++|++++++++
T Consensus       153 sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~-------~~~~~-~~-~~~~~~~~~~d~a~~~~~l  223 (245)
T PRK07060        153 SKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQK-------SGPML-AA-IPLGRFAEVDDVAAPILFL  223 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHH-------HHHHH-hc-CCCCCCCCHHHHHHHHHHH
Confidence            999999999999999998999999999999999986543332111       11111 11 2347899999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcc
Q 023553          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++...+++|+++.+|||+.
T Consensus       224 ~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK07060        224 LSDAASMVSGVSLPVDGGYT  243 (245)
T ss_pred             cCcccCCccCcEEeECCCcc
Confidence            99888899999999999974

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4e-36  Score=254.13  Aligned_cols=243  Identities=39%  Similarity=0.578  Sum_probs=211.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++.+|+++||||+++||+++++.|+++|++|+++ +|+.+..+...+.+.. ..++.++.+|+++++++.++++.+.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999998 8988777666555543 3467889999999999999999999989


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++||++|....  .++.+.+.+++++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.+....|+.+|
T Consensus        82 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK  159 (247)
T PRK05565         82 GKIDILVNNAGISNF--GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASK  159 (247)
T ss_pred             CCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHH
Confidence            999999999998744  677788999999999999999999999999999887789999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++++.+++.++.++...|+++++++||+++|++.+...+..         ...+. . ..+.+++.+++|+++.++++++
T Consensus       160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~---------~~~~~-~-~~~~~~~~~~~~va~~~~~l~~  228 (247)
T PRK05565        160 GAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEED---------KEGLA-E-EIPLGRLGKPEEIAKVVLFLAS  228 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHH---------HHHHH-h-cCCCCCCCCHHHHHHHHHHHcC
Confidence            99999999999999989999999999999999876544321         01111 1 1223678899999999999999


Q ss_pred             CCCCceeecEEEeCCCcc
Q 023553          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      +....++|+.+.+|+|+.
T Consensus       229 ~~~~~~~g~~~~~~~~~~  246 (247)
T PRK05565        229 DDASYITGQIITVDGGWT  246 (247)
T ss_pred             CccCCccCcEEEecCCcc
Confidence            988899999999999974

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=2.2e-36  Score=288.26  Aligned_cols=255  Identities=34%  Similarity=0.471  Sum_probs=210.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC---CCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+..+...+.+.   ....+..+.||+++++++.++++++.+
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999887766655553   223577889999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccch
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .+|++|++|||||....  .++.+.+.++|+..+++|+.+++.+++.+++.|++++ .++||++||..+..+.++...|+
T Consensus       490 ~~g~iDilV~nAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~  567 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATS--SPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYS  567 (676)
T ss_pred             hcCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHH
Confidence            99999999999998654  6778889999999999999999999999999997665 57999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceecc--ccccCCCcchhhhh--hhhhhHHHHhhhccCCCCCCCHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATG--LALAHLPEEERTED--AMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      +||++++++++.++.++.++||+||+|+||.+.|.  ++............  ..........+ ..+++++++|+|+|+
T Consensus       568 aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~l~r~v~peDVA~  646 (676)
T TIGR02632       568 AAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAK-RTLLKRHIFPADIAE  646 (676)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHh-cCCcCCCcCHHHHHH
Confidence            99999999999999999999999999999999653  32211110000000  00111222222 334589999999999


Q ss_pred             HHHHhcCCCCCceeecEEEeCCCccc
Q 023553          246 AVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++.+|++....++||+++.+|||...
T Consensus       647 av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       647 AVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             HHHHHhCCcccCCcCcEEEECCCchh
Confidence            99999987778999999999999754

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-36  Score=255.48  Aligned_cols=244  Identities=31%  Similarity=0.460  Sum_probs=206.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +|+++||||+++||++++++|+++|++|++++|+.+..++..+.+. ...+.++.+|+++.+++.++++++.++++++|+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG-DARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999999999999999888777766653 346788899999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +||++|....  .++.+.+.++|.+.+++|+.+++.+++++++.+.+++.++|+++||..+..+ .+...|+.+|++++.
T Consensus        81 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~  157 (257)
T PRK07074         81 LVANAGAARA--ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIH  157 (257)
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHH
Confidence            9999998755  5677889999999999999999999999999998777899999999876543 466799999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCc
Q 023553          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~  257 (280)
                      ++++++.++.++||+|+.++||+++|++..........       +....... .+.++++.++|+++++++|+++...+
T Consensus       158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~d~a~~~~~l~~~~~~~  229 (257)
T PRK07074        158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQ-------VFEELKKW-YPLQDFATPDDVANAVLFLASPAARA  229 (257)
T ss_pred             HHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChH-------HHHHHHhc-CCCCCCCCHHHHHHHHHHHcCchhcC
Confidence            99999999999999999999999999985443221110       11111111 22378999999999999999887789


Q ss_pred             eeecEEEeCCCccccc
Q 023553          258 ISGTNLMVDGGFTSVN  273 (280)
Q Consensus       258 ~~G~~i~~dgG~~~~~  273 (280)
                      ++|+.+.+|||....+
T Consensus       230 ~~g~~~~~~~g~~~~~  245 (257)
T PRK07074        230 ITGVCLPVDGGLTAGN  245 (257)
T ss_pred             cCCcEEEeCCCcCcCC
Confidence            9999999999987643

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-36  Score=259.24  Aligned_cols=217  Identities=32%  Similarity=0.452  Sum_probs=193.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+.+.   .+.++.||+++++++.++++.+.+.+++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG---LVVGGPLDVTDPASFAAFLDAVEADLGP   78 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---cceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999999888777666554   4677899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.++...|++||++
T Consensus        79 id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  156 (273)
T PRK07825         79 IDVLVNNAGVMPV--GPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHA  156 (273)
T ss_pred             CCEEEECCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHH
Confidence            9999999999765  77888999999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++|+++++.|+.+.||+++.|+||+++|++........                    ...+++|+|+|+.++.++...
T Consensus       157 ~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~~--------------------~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        157 VVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGAK--------------------GFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccccc--------------------CCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999865431100                    024679999999999999764


Q ss_pred             CC
Q 023553          255 AR  256 (280)
Q Consensus       255 ~~  256 (280)
                      ..
T Consensus       217 ~~  218 (273)
T PRK07825        217 RP  218 (273)
T ss_pred             CC
Confidence            43

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-36  Score=253.35  Aligned_cols=240  Identities=34%  Similarity=0.514  Sum_probs=203.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC----cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ----DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~----~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ++++|+++||||+++||+++|+.|+++|++|++++|.    .+..++..+++.. ..++.++.+|+++.+++.++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999997653    3334444444432 2467889999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHH-HhcccCCCceEEEEccccccccCCCCccc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA-RIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      +.++++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++. +.|++++.+++|++||..+..+.+++..|
T Consensus        83 ~~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y  160 (249)
T PRK12827         83 EEFGRLDILVNNAGIATD--AAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNY  160 (249)
T ss_pred             HHhCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchh
Confidence            988999999999998765  678889999999999999999999999999 66666667899999999999888899999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      +.+|++++.+++.++.++++.|+++++++||+++|++.....+.            .+..+.. +.+.+.+++|++++++
T Consensus       161 ~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~------------~~~~~~~-~~~~~~~~~~va~~~~  227 (249)
T PRK12827        161 AASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT------------EHLLNPV-PVQRLGEPDEVAALVA  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH------------HHHHhhC-CCcCCcCHHHHHHHHH
Confidence            99999999999999999998999999999999999986554321            0111111 2256779999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCc
Q 023553          249 FLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      +++++...+++|+++.+|||+
T Consensus       228 ~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        228 FLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             HHcCcccCCccCcEEEeCCCC
Confidence            999887789999999999996

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=1.3e-37  Score=248.35  Aligned_cols=238  Identities=28%  Similarity=0.383  Sum_probs=200.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh--CCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL--GGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++||.+++||+.+|||++++++|+++|..+.++..+.|..+...+..  .+...+.|++||+++..++++.++++.+.
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999888877766554443  44578999999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC---CceEEEEccccccccCCCCccc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      +|.||++||+||+..+          .+|++++++|+.|.++.+...+|+|.+++   +|-||++||..|+.|.|-...|
T Consensus        81 fg~iDIlINgAGi~~d----------kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY  150 (261)
T KOG4169|consen   81 FGTIDILINGAGILDD----------KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY  150 (261)
T ss_pred             hCceEEEEcccccccc----------hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence            9999999999999743          57999999999999999999999997765   4789999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHH--CCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~--~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      ++||+++.+|+|++|...  ...||+++++|||+++|++.+....+.... +-.+.+.+.+.+..     --+|.+++..
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~-e~~~~~~~~l~~~~-----~q~~~~~a~~  224 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYL-EYSDSIKEALERAP-----KQSPACCAIN  224 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcc-cccHHHHHHHHHcc-----cCCHHHHHHH
Confidence            999999999999998874  456999999999999999987763322111 11122333333433     3488999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCcc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++.+++.   ..||+.+.+|+|..
T Consensus       225 ~v~aiE~---~~NGaiw~v~~g~l  245 (261)
T KOG4169|consen  225 IVNAIEY---PKNGAIWKVDSGSL  245 (261)
T ss_pred             HHHHHhh---ccCCcEEEEecCcE
Confidence            9999954   67999999999973

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-36  Score=254.46  Aligned_cols=241  Identities=22%  Similarity=0.283  Sum_probs=199.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++.+|+++||||++|||+++++.|+++|++|+++.++ .+..+...+.+.. ..++.++.||++|.+++.++++++.+.
T Consensus         5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999887664 4445445444432 346788999999999999999999988


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||....  .++.+.+.++|++++++|+.+++.+++++.+.|.+...+++++++|..+..+.+.+..|++|
T Consensus        85 ~~~iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~s  162 (258)
T PRK09134         85 LGPITLLVNNASLFEY--DSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLS  162 (258)
T ss_pred             cCCCCEEEECCcCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHH
Confidence            8999999999998755  67788999999999999999999999999999977677899999998888788888899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++.+++.++.++.+. |+|++++||++.|.....  ..         .+... .. ..+.++..+|+|+|+++++++
T Consensus       163 K~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~--~~---------~~~~~-~~-~~~~~~~~~~~d~a~~~~~~~  228 (258)
T PRK09134        163 KAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS--PE---------DFARQ-HA-ATPLGRGSTPEEIAAAVRYLL  228 (258)
T ss_pred             HHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC--hH---------HHHHH-Hh-cCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999876 999999999998864211  00         01111 11 123477889999999999999


Q ss_pred             CCCCCceeecEEEeCCCcccc
Q 023553          252 SDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +  ..+++|+.+.+|||....
T Consensus       229 ~--~~~~~g~~~~i~gg~~~~  247 (258)
T PRK09134        229 D--APSVTGQMIAVDGGQHLA  247 (258)
T ss_pred             c--CCCcCCCEEEECCCeecc
Confidence            6  457899999999997544

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-36  Score=266.55  Aligned_cols=239  Identities=26%  Similarity=0.336  Sum_probs=200.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +..+++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.. ..++.++.+|++|++++.++++.+.+.
T Consensus         3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999998887777666543 357888999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||....  .++.+.+.++|++++++|+.+++++++.++|.|++++.|+||++||..+..+.+....|+++
T Consensus        83 ~g~iD~lInnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as  160 (334)
T PRK07109         83 LGPIDTWVNNAMVTVF--GPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAA  160 (334)
T ss_pred             CCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHH
Confidence            9999999999998655  67889999999999999999999999999999988778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCC--CCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          172 KHAVLGLNKNVAAELGK--YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       172 K~al~~~~~~la~e~~~--~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      |+++++|+++++.|+..  .+|+++.|+||.++|++.......              ......+.+.+.+|+|+|+++++
T Consensus       161 K~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~--------------~~~~~~~~~~~~~pe~vA~~i~~  226 (334)
T PRK07109        161 KHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSR--------------LPVEPQPVPPIYQPEVVADAILY  226 (334)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhh--------------ccccccCCCCCCCHHHHHHHHHH
Confidence            99999999999999975  479999999999999975432110              00011122567899999999999


Q ss_pred             hcCCCCC--ceeecEEEeCC
Q 023553          250 LASDEAR--YISGTNLMVDG  267 (280)
Q Consensus       250 l~s~~~~--~~~G~~i~~dg  267 (280)
                      +++...+  ++.+....++.
T Consensus       227 ~~~~~~~~~~vg~~~~~~~~  246 (334)
T PRK07109        227 AAEHPRRELWVGGPAKAAIL  246 (334)
T ss_pred             HHhCCCcEEEeCcHHHHHHH
Confidence            9976432  33444444433

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.3e-36  Score=253.15  Aligned_cols=248  Identities=25%  Similarity=0.323  Sum_probs=204.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++++|++|||||+++||++++++|+++|++|++..|+ .+......+.+.. ..++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            45779999999999999999999999999999887654 3444443333332 245778899999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||....  .++.+.+.+++++.+++|+.+++.+++++.|.|.+  .++||++||..+..+.++...|+++
T Consensus        82 ~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  157 (252)
T PRK06077         82 YGVADILVNNAGLGLF--SPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGAM  157 (252)
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHHH
Confidence            9999999999998655  66778888999999999999999999999999854  4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++++++.+++++++ +|+++.+.||+++|++...........      ...+.. .....+++++|+|+|+++++++
T Consensus       158 K~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~dva~~~~~~~  229 (252)
T PRK06077        158 KAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMS------EKEFAE-KFTLMGKILDPEEVAEFVAAIL  229 (252)
T ss_pred             HHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhccccc------HHHHHH-hcCcCCCCCCHHHHHHHHHHHh
Confidence            99999999999999988 899999999999999864432211110      011111 1223368899999999999999


Q ss_pred             CCCCCceeecEEEeCCCcccccCc
Q 023553          252 SDEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      +.  ..++|+++.+|+|.+.+++.
T Consensus       230 ~~--~~~~g~~~~i~~g~~~~~~~  251 (252)
T PRK06077        230 KI--ESITGQVFVLDSGESLKGGI  251 (252)
T ss_pred             Cc--cccCCCeEEecCCeeccCCC
Confidence            63  46799999999999999875

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=1e-35  Score=252.18  Aligned_cols=246  Identities=36%  Similarity=0.477  Sum_probs=211.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+......+.+... .++.++.+|+++++++.++++++.++++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999999999987766665555432 4588899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-~~~~~~~~Y~~sK  172 (280)
                      ++|++||++|....  .++.+.+.+++++.++.|+.+++.+++.+++.|.+++.++||++||..+. .+.++...|+.+|
T Consensus        83 ~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK  160 (251)
T PRK12826         83 RLDILVANAGIFPL--TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASK  160 (251)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHH
Confidence            99999999998765  66778899999999999999999999999999987778899999999988 7788889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++++.+++.++.++.+.|++++.+.||++.|+..+......         ........ .+.+++++++|+|+++.++++
T Consensus       161 ~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~dva~~~~~l~~  230 (251)
T PRK12826        161 AGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQ---------WAEAIAAA-IPLGRLGEPEDIAAAVLFLAS  230 (251)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchH---------HHHHHHhc-CCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999989999999999999999765443210         01111112 233688999999999999998


Q ss_pred             CCCCceeecEEEeCCCcccc
Q 023553          253 DEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ....+++|+.+.+|||....
T Consensus       231 ~~~~~~~g~~~~~~~g~~~~  250 (251)
T PRK12826        231 DEARYITGQTLPVDGGATLP  250 (251)
T ss_pred             ccccCcCCcEEEECCCccCC
Confidence            87788999999999998653

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.1e-36  Score=275.12  Aligned_cols=240  Identities=27%  Similarity=0.364  Sum_probs=204.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc--chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD--NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++|+++||||++|||++++++|+++|++|++++++.  +.+++..+.+.    ..++.||+++++++.++++.+.+.+
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~----~~~~~~Dv~~~~~~~~~~~~~~~~~  282 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG----GTALALDITAPDAPARIAEHLAERH  282 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC----CeEEEEeCCCHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999998853  33344433332    3467899999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||+...  ..+.+.+.++|+.++++|+.+++++.+.+.+.+..++.++||++||.++..+.+++..|+++|
T Consensus       283 g~id~vi~~AG~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asK  360 (450)
T PRK08261        283 GGLDIVVHNAGITRD--KTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASK  360 (450)
T ss_pred             CCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHH
Confidence            999999999998865  778899999999999999999999999999976556679999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +++++|+++++.+++++||++++|+||+++|++.......          ..+...+... ..+...|+|+++++.||++
T Consensus       361 aal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~----------~~~~~~~~~~-l~~~~~p~dva~~~~~l~s  429 (450)
T PRK08261        361 AGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFA----------TREAGRRMNS-LQQGGLPVDVAETIAWLAS  429 (450)
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchh----------HHHHHhhcCC-cCCCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999986543211          0111111222 3677899999999999999


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...++||++|.+|||...
T Consensus       430 ~~~~~itG~~i~v~g~~~~  448 (450)
T PRK08261        430 PASGGVTGNVVRVCGQSLL  448 (450)
T ss_pred             hhhcCCCCCEEEECCCccc
Confidence            9889999999999998764

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=2.3e-35  Score=249.36  Aligned_cols=244  Identities=36%  Similarity=0.531  Sum_probs=207.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++|||++++||++++++|+++|++|+++.|+.+ ..+...+.+. ...++.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999988887654 3444444443 23568888999999999999999999988


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++||+||....  ..+.+.+.+++++.+++|+.+++.+.+.+++.+.+.+.++++++||..+..+.++...|+++|
T Consensus        82 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk  159 (248)
T PRK05557         82 GGVDILVNNAGITRD--NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASK  159 (248)
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHH
Confidence            999999999998765  667778899999999999999999999999999877778999999998888888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++++.+++.++.++...|++++.++||+++|++.....+.          +........ +.+++.+++|+++++.+|++
T Consensus       160 ~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~----------~~~~~~~~~-~~~~~~~~~~va~~~~~l~~  228 (248)
T PRK05557        160 AGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPED----------VKEAILAQI-PLGRLGQPEEIASAVAFLAS  228 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChH----------HHHHHHhcC-CCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999998999999999999999886543211          111111122 23678899999999999998


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      ....+++|+.+.+|||+++
T Consensus       229 ~~~~~~~g~~~~i~~~~~~  247 (248)
T PRK05557        229 DEAAYITGQTLHVNGGMVM  247 (248)
T ss_pred             cccCCccccEEEecCCccC
Confidence            8778999999999999875

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-35  Score=255.78  Aligned_cols=229  Identities=24%  Similarity=0.293  Sum_probs=189.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.+++..+     ..+.++.+|+++++++.++++++.+.++++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id   76 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-----LGVHPLSLDVTDEASIKAAVDTIIAEEGRID   76 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            47999999999999999999999999999999999877655432     2367889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||+...  .++.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+....|+++|++++
T Consensus        77 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  154 (273)
T PRK06182         77 VLVNNAGYGSY--GAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALE  154 (273)
T ss_pred             EEEECCCcCCC--CchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHH
Confidence            99999998755  7788999999999999999999999999999998887899999999998888888889999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc------chhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE------EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|+++++.|+.++||++++++||+++|++.......      .....+..+......... ...+++.+|+|+|++++++
T Consensus       155 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vA~~i~~~  233 (273)
T PRK06182        155 GFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRST-YGSGRLSDPSVIADAISKA  233 (273)
T ss_pred             HHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHh-hccccCCCHHHHHHHHHHH
Confidence            999999999999999999999999999975321100      000000000000111111 1237889999999999999


Q ss_pred             cCC
Q 023553          251 ASD  253 (280)
Q Consensus       251 ~s~  253 (280)
                      ++.
T Consensus       234 ~~~  236 (273)
T PRK06182        234 VTA  236 (273)
T ss_pred             HhC
Confidence            974

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-35  Score=253.26  Aligned_cols=257  Identities=33%  Similarity=0.493  Sum_probs=211.1

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +..++++|+++||||+++||+.++++|+++|++|++++|+.+..++..+..... ++.++.+|+++++++.++++++.+.
T Consensus         5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA-KVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC-ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            455689999999999999999999999999999999999987776665554322 5688899999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCC-ceEEEEccccccccCCCCccchh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|++||++|..... ..+...+.++|++++++|+.+++.+++.+++.+...+. ++|+++||..+..+.++...|+.
T Consensus        84 ~~~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~  162 (264)
T PRK12829         84 FGGLDVLVNNAGIAGPT-GGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAA  162 (264)
T ss_pred             hCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHH
Confidence            99999999999987332 56778899999999999999999999999998876655 78999999998888888899999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh-hhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +|++++.+++.++.++...+++++++.||+++|++.....+...... ...........+.. +.+++++++|+++++.+
T Consensus       163 ~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~~~~~  241 (264)
T PRK12829        163 SKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKI-SLGRMVEPEDIAATALF  241 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcC-CCCCCCCHHHHHHHHHH
Confidence            99999999999999998889999999999999998654432110000 00000111111112 23679999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++.....++|+.+.+|||...
T Consensus       242 l~~~~~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        242 LASPAARYITGQAISVDGNVEY  263 (264)
T ss_pred             HcCccccCccCcEEEeCCCccc
Confidence            9987667889999999999764

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=250.00  Aligned_cols=237  Identities=30%  Similarity=0.407  Sum_probs=205.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++.+++|+++||||+++||+.++++|+++|++|++++|+.++..+..+.+.. ....++.+|+++.+++.++++.+.+.+
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA-DALRIGGIDLVDPQAARRAVDEVNRQF   80 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh-cCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            3457899999999999999999999999999999999988766655544432 235567799999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++||++|....  ..+.+.+.+++++.+++|+.+++.+++++++.|.+++.++||++||..+..+.++...|+++|
T Consensus        81 ~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk  158 (239)
T PRK12828         81 GRLDALVNIAGAFVW--GTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAK  158 (239)
T ss_pred             CCcCEEEECCcccCc--CChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHH
Confidence            999999999998654  566778899999999999999999999999999877789999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++++.+++.++.++.+.|++++.+.||++.|++.....+...                   ...+++++|++++++++++
T Consensus       159 ~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~~~-------------------~~~~~~~~dva~~~~~~l~  219 (239)
T PRK12828        159 AGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPDAD-------------------FSRWVTPEQIAAVIAFLLS  219 (239)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCchh-------------------hhcCCCHHHHHHHHHHHhC
Confidence            999999999999998889999999999999986443322110                   1447899999999999998


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      ....+++|+.+.+|||.+.
T Consensus       220 ~~~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        220 DEAQAITGASIPVDGGVAL  238 (239)
T ss_pred             cccccccceEEEecCCEeC
Confidence            7777899999999999754

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-36  Score=250.07  Aligned_cols=232  Identities=29%  Similarity=0.409  Sum_probs=196.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .+|+++||||+++||++++++|+++|++|++++|+.+..      .    ...++.+|+++.+++.++++++.+.+ ++|
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~----~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d   70 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F----PGELFACDLADIEQTAATLAQINEIH-PVD   70 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c----CceEEEeeCCCHHHHHHHHHHHHHhC-CCc
Confidence            478999999999999999999999999999999987541      0    12467899999999999999998875 699


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||+|....  .++.+.+.++|++.+++|+.+++.+.+.++|.|++.+.++||++||.. ..+.++...|+++|++++
T Consensus        71 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~  147 (234)
T PRK07577         71 AIVNNVGIALP--QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALV  147 (234)
T ss_pred             EEEECCCCCCC--CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHH
Confidence            99999998765  677788999999999999999999999999999877789999999985 456678899999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~  256 (280)
                      +++++++.+++++||++++|+||+++|++.+...+.....       ....... .+.+++.+|+|+|+++++|++....
T Consensus       148 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~  219 (234)
T PRK07577        148 GCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEE-------EKRVLAS-IPMRRLGTPEEVAAAIAFLLSDDAG  219 (234)
T ss_pred             HHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhH-------HHHHhhc-CCCCCCcCHHHHHHHHHHHhCcccC
Confidence            9999999999999999999999999999876543221110       0111112 2336778999999999999988778


Q ss_pred             ceeecEEEeCCCcc
Q 023553          257 YISGTNLMVDGGFT  270 (280)
Q Consensus       257 ~~~G~~i~~dgG~~  270 (280)
                      +++|+++.+|||..
T Consensus       220 ~~~g~~~~~~g~~~  233 (234)
T PRK07577        220 FITGQVLGVDGGGS  233 (234)
T ss_pred             CccceEEEecCCcc
Confidence            99999999999965

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-35  Score=250.28  Aligned_cols=234  Identities=24%  Similarity=0.394  Sum_probs=202.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCC--CHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVT--KEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~--~~~~~~~~~~~~~~   90 (280)
                      .+++|+++||||+++||.+++++|++.|++|++++|+.+..++..+++...  ..+.++.+|++  +++++.++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999988777666655432  34556666665  88999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||..... .++.+.+.++|++.+++|+.+.+.++++++++|.+++.++|+++||..+..+.+++..|++
T Consensus        89 ~~~~id~vi~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  167 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGEL-GPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAV  167 (247)
T ss_pred             HhCCCCEEEECCcccCCC-CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHH
Confidence            999999999999986442 5677888999999999999999999999999998888899999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||++++.+++.++.++...||+++++.||.++|++.....+...                   ...+.+|+|+++.++++
T Consensus       168 sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~  228 (247)
T PRK08945        168 SKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGED-------------------PQKLKTPEDIMPLYLYL  228 (247)
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCccc-------------------ccCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999997544433211                   04578999999999999


Q ss_pred             cCCCCCceeecEEEeCCC
Q 023553          251 ASDEARYISGTNLMVDGG  268 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG  268 (280)
                      ++...++++|+++...-|
T Consensus       229 ~~~~~~~~~g~~~~~~~~  246 (247)
T PRK08945        229 MGDDSRRKNGQSFDAQPG  246 (247)
T ss_pred             hCccccccCCeEEeCCCC
Confidence            998888999999876544

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-35  Score=249.08  Aligned_cols=227  Identities=26%  Similarity=0.308  Sum_probs=195.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ++|+++||||+++||+.++++|+++|++|++++|+.+..++..+.+.. ..++.++.+|+++++++.++++.+.++++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999998777666555543 2468889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||||....  .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+.+|+++
T Consensus        85 d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~  162 (241)
T PRK07454         85 DVLINNAGMAYT--GPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAAL  162 (241)
T ss_pred             CEEEECCCccCC--CchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHH
Confidence            999999998754  667888999999999999999999999999999877789999999999988888899999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      +.+++.++.++++.||++++|.||+++|++.........           +      ....+.+++|+|++++++++.+.
T Consensus       163 ~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~~-----------~------~~~~~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        163 AAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQAD-----------F------DRSAMLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccccc-----------c------ccccCCCHHHHHHHHHHHHcCCc
Confidence            999999999999999999999999999998543211000           0      01356799999999999999766


Q ss_pred             CceeecE
Q 023553          256 RYISGTN  262 (280)
Q Consensus       256 ~~~~G~~  262 (280)
                      ..+.++.
T Consensus       226 ~~~~~~~  232 (241)
T PRK07454        226 SAVIEDL  232 (241)
T ss_pred             cceeeeE
Confidence            6555444

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-35  Score=251.40  Aligned_cols=216  Identities=24%  Similarity=0.309  Sum_probs=188.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +|+++||||++|||+++++.|+++|++|++++|+.+.+++..+.+....++.++.||+++++++.++++++.++++++|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            57999999999999999999999999999999998887777666643337888999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +|||||+.... ....+.+.++|++++++|+.+++.+++.++|.|++++.++||++||..+..+.+....|++||++++.
T Consensus        82 lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (257)
T PRK07024         82 VIANAGISVGT-LTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIK  160 (257)
T ss_pred             EEECCCcCCCc-cccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence            99999986431 22334788999999999999999999999999988888999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      |+++++.|++++||+|++++||+++|++.......                     ...+.+|+++++.++..+....
T Consensus       161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---------------------~~~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPYP---------------------MPFLMDADRFAARAARAIARGR  217 (257)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCcCchhhcCCCC---------------------CCCccCHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999975432100                     0234689999999999997544

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=1.2e-35  Score=259.79  Aligned_cols=238  Identities=20%  Similarity=0.194  Sum_probs=194.2

Q ss_pred             EEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           22 LITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        22 lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      |||||++|||++++++|+++| ++|++++|+.+..++..+.+.. ...+.++.+|+++.++++++++++.+.++++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 9999999998877777666643 34677889999999999999999998889999999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC--CceEEEEcccccccc----------------
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIG----------------  161 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~isS~~~~~~----------------  161 (280)
                      ||||+.... .++.+.+.++|++++++|+.+++.+++.++|.|++.+  .|+||++||..+..+                
T Consensus        81 nnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         81 CNAAVYLPT-AKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             ECCCcCCCC-CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            999986431 3566789999999999999999999999999997765  589999999876421                


Q ss_pred             -------------------CCCCccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCce-eccccccCCCcchhhhhhh
Q 023553          162 -------------------GLGPHAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAV-ATGLALAHLPEEERTEDAM  220 (280)
Q Consensus       162 -------------------~~~~~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~  220 (280)
                                         ..++..|++||+|...+++.+++++.+ .||+|++++||++ .|++.+...+..       
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~-------  232 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLF-------  232 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHH-------
Confidence                               023567999999999999999999975 6999999999999 789876533210       


Q ss_pred             hhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          221 VGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ........+  .+.+++.+|++.|+.++++++....+.+|+++..||+.
T Consensus       233 ~~~~~~~~~--~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        233 RLLFPPFQK--YITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HHHHHHHHH--HHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence            000000111  11256789999999999999887778899999998873

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-35  Score=254.26  Aligned_cols=248  Identities=23%  Similarity=0.303  Sum_probs=205.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      |+++||||++|||+++++.|+++|++|++++|+.+.+++..+.+...  ....++.+|+++++++.++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999988777666655422  2345578999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhhHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      ++|||+|....  ..+.+.+.++|++.+++|+.+++.++++++|.|.+. ..++||++||..+..+.++...|+++|+|+
T Consensus        81 ~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  158 (272)
T PRK07832         81 VVMNIAGISAW--GTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGL  158 (272)
T ss_pred             EEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHH
Confidence            99999998654  678899999999999999999999999999999664 358999999999988888999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      .+|++.++.|+..+||+|+.++||.++|++.............  +....+...   ..++..+|+|+|+.++++++ ..
T Consensus       159 ~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~vA~~~~~~~~-~~  232 (272)
T PRK07832        159 RGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDRED--PRVQKWVDR---FRGHAVTPEKAAEKILAGVE-KN  232 (272)
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcch--hhHHHHHHh---cccCCCCHHHHHHHHHHHHh-cC
Confidence            9999999999999999999999999999987653211100000  011111111   12567899999999999996 45


Q ss_pred             CceeecEEEeCCCcccccC
Q 023553          256 RYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~~~~  274 (280)
                      ++++|..+.+++|++....
T Consensus       233 ~~~~~~~~~~~~~~~~~~~  251 (272)
T PRK07832        233 RYLVYTSPDIRALYWFKRK  251 (272)
T ss_pred             CeEEecCcchHHHHHHHhc
Confidence            7899999999999887663

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-35  Score=252.13  Aligned_cols=234  Identities=26%  Similarity=0.312  Sum_probs=192.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.++.+.+..  ..++.++.+|+++++++.++++.+.+.++++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH--PDRALARLLDVTDFDAIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc--CCCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999999999999999999988766554432  23577889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||....  .++.+.+.++|++++++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|++++
T Consensus        81 ~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~  158 (277)
T PRK06180         81 VLVNNAGYGHE--GAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALE  158 (277)
T ss_pred             EEEECCCccCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHH
Confidence            99999998754  6788899999999999999999999999999998877889999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhh-hhhHHHH-hhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAM-VGFRNFV-ARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++++++.++.++|+++++++||+++|++............... ..+.... ........++.+|+|+|+++++++...
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999987543322110000000 0011110 011122256789999999999998754

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=1.2e-35  Score=260.53  Aligned_cols=214  Identities=22%  Similarity=0.262  Sum_probs=177.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..|++++||||++|||+++|++|+++|++|++++|+.+.+++..+++..   ..++..+.+|+++  ++.+.++++.+.+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            4699999999999999999999999999999999999988887766642   2467778899985  2233344444444


Q ss_pred             C--CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-c-CCCCccc
Q 023553           93 G--TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-G-GLGPHAY  168 (280)
Q Consensus        93 g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-~-~~~~~~Y  168 (280)
                      +  ++|++|||||+.......+.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||.++.. + .|....|
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y  208 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY  208 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHH
Confidence            4  4669999999875322467889999999999999999999999999999888889999999999864 3 5788999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+++|+++|+.|++++||+|++|+||+++|++......                    .  -...+|+++|+.++
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~~--------------------~--~~~~~p~~~A~~~~  266 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRRS--------------------S--FLVPSSDGYARAAL  266 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccCC--------------------C--CCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999998642100                    0  01358999999999


Q ss_pred             HhcCC
Q 023553          249 FLASD  253 (280)
Q Consensus       249 ~l~s~  253 (280)
                      ..+..
T Consensus       267 ~~~~~  271 (320)
T PLN02780        267 RWVGY  271 (320)
T ss_pred             HHhCC
Confidence            88853

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-35  Score=251.46  Aligned_cols=243  Identities=26%  Similarity=0.290  Sum_probs=198.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .+|+++||||+++||++++++|+++|++|++++|+.+.+++..+...  ..+.++++|+++++++.++++.+.+.++++|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYG--DRLLPLALDVTDRAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc--CCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            36899999999999999999999999999999999887766655442  3577889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||+...  .++.+.+.++|++++++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++
T Consensus        80 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~  157 (275)
T PRK08263         80 IVVNNAGYGLF--GMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALE  157 (275)
T ss_pred             EEEECCCCccc--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHH
Confidence            99999998755  7788999999999999999999999999999998777789999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCC-CCHHHHHHHHHHhcCCCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE-LTANDVANAVLFLASDEA  255 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dva~~i~~l~s~~~  255 (280)
                      .+++.++.+++++||+|+.++||+++|++............. .......... ....+++ ++|+|++++++++++.. 
T Consensus       158 ~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~p~dva~~~~~l~~~~-  234 (275)
T PRK08263        158 GMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDA-YDTLREELAE-QWSERSVDGDPEAAAEALLKLVDAE-  234 (275)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchh-hhhHHHHHHH-HHHhccCCCCHHHHHHHHHHHHcCC-
Confidence            999999999999999999999999999987532211100000 0001011111 1122566 89999999999999753 


Q ss_pred             CceeecEEEeCC
Q 023553          256 RYISGTNLMVDG  267 (280)
Q Consensus       256 ~~~~G~~i~~dg  267 (280)
                       ...++++...+
T Consensus       235 -~~~~~~~~~~~  245 (275)
T PRK08263        235 -NPPLRLFLGSG  245 (275)
T ss_pred             -CCCeEEEeCch
Confidence             33555554433

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.4e-35  Score=233.06  Aligned_cols=187  Identities=22%  Similarity=0.283  Sum_probs=172.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+.|.++|||||++|||+++|++|.+.|..|++++|+++.+++..+..   ..++...||+.|.++.+++++++++.++.
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~---p~~~t~v~Dv~d~~~~~~lvewLkk~~P~   78 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN---PEIHTEVCDVADRDSRRELVEWLKKEYPN   78 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC---cchheeeecccchhhHHHHHHHHHhhCCc
Confidence            468999999999999999999999999999999999999998876643   46778889999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+..+.+-.-.+.+.++.++.+.+|+.+++++++.++|+++++.++.||++||+-+..|+.....||++|+|
T Consensus        79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAa  158 (245)
T COG3967          79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAA  158 (245)
T ss_pred             hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHH
Confidence            99999999998763222235667889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceecc
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATG  204 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~  204 (280)
                      ++.|+.+|+++++..+|.|.-+.|..|+|+
T Consensus       159 iHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         159 IHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            999999999999999999999999999997

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=3e-35  Score=247.44  Aligned_cols=222  Identities=22%  Similarity=0.224  Sum_probs=183.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           19 RVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++++||||++|||+++|++|+++|  +.|+...|+....      . ...++.+++||+++.++++++    .++++++|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~-~~~~~~~~~~Dls~~~~~~~~----~~~~~~id   69 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F-QHDNVQWHALDVTDEAEIKQL----SEQFTQLD   69 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c-ccCceEEEEecCCCHHHHHHH----HHhcCCCC
Confidence            479999999999999999999985  5566666654321      1 124678899999999998774    34568999


Q ss_pred             EEEECCCCCCCC----CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc---cCCCCccch
Q 023553           97 IMVNNAGISGAP----CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI---GGLGPHAYT  169 (280)
Q Consensus        97 ~li~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~---~~~~~~~Y~  169 (280)
                      ++|||||.....    ...+.+.+.+.|++.+++|+.+++.+++.++|.|++.+.++++++||..+..   +.+++..|+
T Consensus        70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~  149 (235)
T PRK09009         70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYR  149 (235)
T ss_pred             EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhh
Confidence            999999987531    2457788999999999999999999999999999877778999999866533   245678999


Q ss_pred             hhHHHHHHHHHHHHHHHCC--CCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGK--YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~--~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      ++|+++++|+++|+.|+.+  .+|+|++|+||+++|++.......                   .+.+++.+|+|+|+.+
T Consensus       150 asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~~-------------------~~~~~~~~~~~~a~~~  210 (235)
T PRK09009        150 ASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQN-------------------VPKGKLFTPEYVAQCL  210 (235)
T ss_pred             hhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhhc-------------------cccCCCCCHHHHHHHH
Confidence            9999999999999999986  689999999999999986532110                   1126678999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCcc
Q 023553          248 LFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++++++...+.+|+.+.+|||+.
T Consensus       211 ~~l~~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        211 LGIIANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             HHHHHcCChhhCCcEEeeCCcCC
Confidence            99999888899999999999985

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-35  Score=254.72  Aligned_cols=220  Identities=23%  Similarity=0.315  Sum_probs=187.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++++|+++||||++|||+++|+.|+++|++|++++|+.+.+++..+.+.. ...+.++.+|++|++++.++++.+.+.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3557899999999999999999999999999999999998887776666532 346778999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCC--CHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-cCCCCccc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREA--DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GGLGPHAY  168 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-~~~~~~~Y  168 (280)
                      ++++|++|||||+...  .++.+.  +.+++++.+++|+.+++.++++++|.|++++.|+||++||..+.. +.++...|
T Consensus       115 ~g~id~li~~AG~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y  192 (293)
T PRK05866        115 IGGVDILINNAGRSIR--RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVY  192 (293)
T ss_pred             cCCCCEEEECCCCCCC--cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchH
Confidence            9999999999998754  444442  468899999999999999999999999888889999999977654 36778899


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+++|+++++.|+.++||+|++++||+++|++........                  .  ....+|+++|+.++
T Consensus       193 ~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~~------------------~--~~~~~pe~vA~~~~  252 (293)
T PRK05866        193 NASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAYD------------------G--LPALTADEAAEWMV  252 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccccc------------------C--CCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999864321100                  0  12468999999999


Q ss_pred             HhcCCC
Q 023553          249 FLASDE  254 (280)
Q Consensus       249 ~l~s~~  254 (280)
                      ..+...
T Consensus       253 ~~~~~~  258 (293)
T PRK05866        253 TAARTR  258 (293)
T ss_pred             HHHhcC
Confidence            988643

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=6e-35  Score=279.56  Aligned_cols=255  Identities=36%  Similarity=0.504  Sum_probs=215.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ..++||+++||||++|||+++++.|+++|++|++++|+.+.++...+.+.....+.++.||+++++++.++++++.+.+|
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG  497 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            34689999999999999999999999999999999999988777766665435788899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCC-ceEEEEccccccccCCCCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.+++.|++++. |+||++||..+..+.++...|+++|
T Consensus       498 ~iDvvI~~AG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asK  575 (681)
T PRK08324        498 GVDIVVSNAGIAIS--GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAK  575 (681)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHH
Confidence            99999999998765  77888999999999999999999999999999987664 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCce--eccccccCCCcchhhhhh--hhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAV--ATGLALAHLPEEERTEDA--MVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v--~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++++++++.++.++.+.||+|+.|+||.+  .|++..............  ......+..+ ..+.+++++++|+|++++
T Consensus       576 aa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l~~~v~~~DvA~a~~  654 (681)
T PRK08324        576 AAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRA-RNLLKREVTPEDVAEAVV  654 (681)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHh-cCCcCCccCHHHHHHHHH
Confidence            99999999999999999999999999999  787654322111000000  0111122222 334588999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++++....++|+++.+|||...
T Consensus       655 ~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        655 FLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             HHhCccccCCcCCEEEECCCchh
Confidence            99987777899999999999764

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-35  Score=251.47  Aligned_cols=231  Identities=21%  Similarity=0.252  Sum_probs=188.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   95 (280)
                      .+|+++||||++|||+++++.|+++|++|++++|+.+.++++.+     ..+.++.+|++|++++.++++.+.+.+ +++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-----EGLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----CCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            47899999999999999999999999999999999887665543     136678999999999999999997766 689


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||||+...  ..+.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.++...|++||+|+
T Consensus        78 d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  155 (277)
T PRK05993         78 DALFNNGAYGQP--GAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAI  155 (277)
T ss_pred             cEEEECCCcCCC--CCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHH
Confidence            999999998765  778889999999999999999999999999999888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh------hhhhhh---hhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER------TEDAMV---GFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      ++|+++++.|++++||+|++|+||+++|++..........      ......   ........ ........+|+++|+.
T Consensus       156 ~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~  234 (277)
T PRK05993        156 EGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGG-GSKSRFKLGPEAVYAV  234 (277)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhh-hhccccCCCHHHHHHH
Confidence            9999999999999999999999999999987643221000      000000   00001010 1111235689999999


Q ss_pred             HHHhcCCCC
Q 023553          247 VLFLASDEA  255 (280)
Q Consensus       247 i~~l~s~~~  255 (280)
                      ++..+....
T Consensus       235 i~~a~~~~~  243 (277)
T PRK05993        235 LLHALTAPR  243 (277)
T ss_pred             HHHHHcCCC
Confidence            999987543

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=2.1e-34  Score=243.20  Aligned_cols=243  Identities=34%  Similarity=0.517  Sum_probs=208.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+++||||+++||+.+++.|+++|+.|++++|+++..+.....+.. ..++.++.+|+++++++.++++++.+.++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            45689999999999999999999999999999999998877666555542 35688889999999999999999998889


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++||++|....  .++.+.+.+++++.++.|+.+++.+++++.|.|.+.+.++||++||..+..+..+...|+.+|+
T Consensus        82 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~  159 (246)
T PRK05653         82 ALDILVNNAGITRD--ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKA  159 (246)
T ss_pred             CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHH
Confidence            99999999998655  6677889999999999999999999999999997777789999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +++.+++.+++++.+.|+++++++||.+.++........  .       ...+ ... .+.+.+++++|+++++.+++++
T Consensus       160 ~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~--~-------~~~~-~~~-~~~~~~~~~~dva~~~~~~~~~  228 (246)
T PRK05653        160 GVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEE--V-------KAEI-LKE-IPLGRLGQPEEVANAVAFLASD  228 (246)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHH--H-------HHHH-Hhc-CCCCCCcCHHHHHHHHHHHcCc
Confidence            999999999999998899999999999999876431110  0       0011 111 2236789999999999999988


Q ss_pred             CCCceeecEEEeCCCcc
Q 023553          254 EARYISGTNLMVDGGFT  270 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~  270 (280)
                      ....++|+.+.+|||..
T Consensus       229 ~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        229 AASYITGQVIPVNGGMY  245 (246)
T ss_pred             hhcCccCCEEEeCCCee
Confidence            77899999999999975

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.7e-35  Score=275.40  Aligned_cols=238  Identities=26%  Similarity=0.373  Sum_probs=198.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ....++++|||||++|||++++++|+++|++|++++|+.+.+++..+.+.. ..++.++.||+++++++.++++++.+.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            346789999999999999999999999999999999998887777666643 2468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      |++|++|||||+...  .++.+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||.++..+.++...|++|
T Consensus       391 g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  468 (582)
T PRK05855        391 GVPDIVVNNAGIGMA--GGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATS  468 (582)
T ss_pred             CCCcEEEECCccCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHH
Confidence            999999999999765  7788999999999999999999999999999998765 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++|+++++.|++++||+|++|+||+++|++...........+. .........+  .+.....+|+++|+++++++
T Consensus       469 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~p~~va~~~~~~~  545 (582)
T PRK05855        469 KAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAED-EARRRGRADK--LYQRRGYGPEKVAKAIVDAV  545 (582)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccch-hhhHHhhhhh--hccccCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999987654211110000 0000111111  11134568999999999999


Q ss_pred             CCCCC
Q 023553          252 SDEAR  256 (280)
Q Consensus       252 s~~~~  256 (280)
                      +....
T Consensus       546 ~~~~~  550 (582)
T PRK05855        546 KRNKA  550 (582)
T ss_pred             HcCCC
Confidence            76543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-34  Score=244.35  Aligned_cols=240  Identities=28%  Similarity=0.413  Sum_probs=198.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      |+++||||+++||+++++.|+++|++|+++ .|+.+..++..+.+.. ...+.++.||++|++++.++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            689999999999999999999999999874 5666655555554432 24577899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC---CceEEEEccccccccCCC-CccchhhH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLG-PHAYTGSK  172 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~isS~~~~~~~~~-~~~Y~~sK  172 (280)
                      ++|||+|..... .++.+.+.++|+..+++|+.+++.+++.+++.|.++.   .|+||++||..+..+.++ +..|+++|
T Consensus        82 ~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         82 ALVNNAGILFTQ-CTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             EEEECCCCCCCC-CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            999999986432 5677889999999999999999999999999987653   478999999998888775 46899999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++++.+++.++.++.++||++++++||+++|++...... ...       ... ..... +.++..+|+|++++++++++
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~-~~~-------~~~-~~~~~-~~~~~~~~~dva~~~~~~~~  230 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE-PGR-------VDR-VKSNI-PMQRGGQPEEVAQAIVWLLS  230 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC-HHH-------HHH-HHhcC-CCCCCcCHHHHHHHHHhhcC
Confidence            999999999999999999999999999999997543211 100       011 11112 23567799999999999999


Q ss_pred             CCCCceeecEEEeCCCc
Q 023553          253 DEARYISGTNLMVDGGF  269 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~  269 (280)
                      ....+++|+++.+|||.
T Consensus       231 ~~~~~~~g~~~~~~g~~  247 (247)
T PRK09730        231 DKASYVTGSFIDLAGGK  247 (247)
T ss_pred             hhhcCccCcEEecCCCC
Confidence            87788999999999973

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-34  Score=243.76  Aligned_cols=222  Identities=31%  Similarity=0.455  Sum_probs=193.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.++++|+++||||+++||++++++|+++|++|++++|+.+..++..+.+.. ..++.++.+|+++++++.++++++.++
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999998777666555533 246788899999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++||++|....  ..+.+.+.++|++.+++|+.+++.+++.+.+.|.+++.+++|++||..+..+.++...|+.+
T Consensus        82 ~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  159 (239)
T PRK07666         82 LGSIDILINNAGISKF--GKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSAS  159 (239)
T ss_pred             cCCccEEEEcCccccC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHH
Confidence            9999999999998654  66778899999999999999999999999999988778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++.+++.++.++.++||+++.|.||++.|++........                 ..+ ..+.+++|+|+.++.++
T Consensus       160 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-----------------~~~-~~~~~~~~~a~~~~~~l  221 (239)
T PRK07666        160 KFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTD-----------------GNP-DKVMQPEDLAEFIVAQL  221 (239)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccccc-----------------cCC-CCCCCHHHHHHHHHHHH
Confidence            999999999999999999999999999999999764331110                 001 45689999999999999


Q ss_pred             CCC
Q 023553          252 SDE  254 (280)
Q Consensus       252 s~~  254 (280)
                      +..
T Consensus       222 ~~~  224 (239)
T PRK07666        222 KLN  224 (239)
T ss_pred             hCC
Confidence            754

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-34  Score=254.37  Aligned_cols=240  Identities=20%  Similarity=0.209  Sum_probs=190.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++++|+++||||++|||+++|+.|+++|++|++++|+.+..++..+.+.   .+.++.+|+++.++++++++++.+.++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~---~v~~~~~Dl~d~~~v~~~~~~~~~~~~   98 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID---GVEVVMLDLADLESVRAFAERFLDSGR   98 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh---hCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence            45789999999999999999999999999999999999887776665543   367889999999999999999999889


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc------------c
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI------------G  161 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~------------~  161 (280)
                      ++|++|||||+...    ....+.++|+..+++|+.+++.+++.++|.|.+.+.++||++||..+..            +
T Consensus        99 ~iD~li~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~  174 (315)
T PRK06196         99 RIDILINNAGVMAC----PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRG  174 (315)
T ss_pred             CCCEEEECCCCCCC----CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCC
Confidence            99999999998643    1345678899999999999999999999999877778999999976532            2


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh-ccCCCCCCCH
Q 023553          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN-ANMQGTELTA  240 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  240 (280)
                      .++...|+.||+|++.+++.++++++++||+|++|+||++.|++.+.........      . .+.... .++..++.+|
T Consensus       175 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~  247 (315)
T PRK06196        175 YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVA------L-GWVDEHGNPIDPGFKTP  247 (315)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhh------h-hhhhhhhhhhhhhcCCH
Confidence            2345689999999999999999999999999999999999999865432211100      0 011110 1111256799


Q ss_pred             HHHHHHHHHhcCCCCCceeecEEEeCC
Q 023553          241 NDVANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       241 ~dva~~i~~l~s~~~~~~~G~~i~~dg  267 (280)
                      +++|..+++|++......+|..+..|.
T Consensus       248 ~~~a~~~~~l~~~~~~~~~~g~~~~~~  274 (315)
T PRK06196        248 AQGAATQVWAATSPQLAGMGGLYCEDC  274 (315)
T ss_pred             hHHHHHHHHHhcCCccCCCCCeEeCCC
Confidence            999999999997554444555555453

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=247.46  Aligned_cols=221  Identities=22%  Similarity=0.334  Sum_probs=192.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....++.++.+|+++++++.++++.+.+ +++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~   80 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGG   80 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCC
Confidence            4679999999999999999999999999999999999888777766664445788899999999999999998876 789


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||....  .++.+.+.+++++.+++|+.+++.+++.++|+|.+++.+++++++|..+..+.++...|+++|++
T Consensus        81 id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  158 (263)
T PRK09072         81 INVLINNAGVNHF--ALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFA  158 (263)
T ss_pred             CCEEEECCCCCCc--cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHH
Confidence            9999999998654  67888999999999999999999999999999987777999999999999998999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +.++++.++.+++++||+|++++||+++|++........                ...+..++.+|+|+|+++++++...
T Consensus       159 ~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~----------------~~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        159 LRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQAL----------------NRALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccc----------------cccccCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999754321100                0001135779999999999999754

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=2.2e-34  Score=244.78  Aligned_cols=251  Identities=31%  Similarity=0.486  Sum_probs=207.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|++|||||+++||+.+++.|+++|++|++++|+.+..+.+.+.+.. ..++.++.+|+++++++.++++++.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999998877776665532 24688899999999999999999999889999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++||+||....  ....+.+.++++++++.|+.+++.+++.+++.|.+.+.+++|++||..+..+.+.+..|+.+|++++
T Consensus        81 ~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~  158 (255)
T TIGR01963        81 ILVNNAGIQHV--APIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLI  158 (255)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHH
Confidence            99999998754  5566788999999999999999999999999998777789999999998888888999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhh--hhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA--MVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      .+++.++.++.+.+|+++.++||++.|++.....+........  .......+.. ....+.+++++|+|+++++++++.
T Consensus       159 ~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~~~~~~~~~~  237 (255)
T TIGR01963       159 GLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLP-GQPTKRFVTVDEVAETALFLASDA  237 (255)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHc-cCccccCcCHHHHHHHHHHHcCcc
Confidence            9999999999888999999999999999754432211000000  0000001111 112357899999999999999876


Q ss_pred             CCceeecEEEeCCCccc
Q 023553          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ...++|+.+.+|||+.+
T Consensus       238 ~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       238 AAGITGQAIVLDGGWTA  254 (255)
T ss_pred             ccCccceEEEEcCcccc
Confidence            66789999999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=2.7e-34  Score=229.64  Aligned_cols=252  Identities=23%  Similarity=0.244  Sum_probs=216.1

Q ss_pred             cccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..|+||++||+|-.  +.|++.||+.|.++|+.+..++..+.-.++..+..+..+...+++||+++.+++.+++++++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            45899999999975  8999999999999999999999988544443333333345677899999999999999999999


Q ss_pred             hCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           92 FGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        92 ~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +|++|.+||+-+....  ..+++.+.+.|.|...+++..++...+.+++.|.|  .++|.++.++=..+..-.|.+...+
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM--~~ggSiltLtYlgs~r~vPnYNvMG  159 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLM--NNGGSILTLTYLGSERVVPNYNVMG  159 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhc--CCCCcEEEEEeccceeecCCCchhH
Confidence            9999999999998752  33678889999999999999999999999999999  4479999999888888889999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      .+|++|++-+|.||.++.++|||||+|+-|+++|=-.......        ..+..+..+.. ++++-+++|||++..+|
T Consensus       160 vAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f--------~~~l~~~e~~a-Pl~r~vt~eeVG~tA~f  230 (259)
T COG0623         160 VAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDF--------RKMLKENEANA-PLRRNVTIEEVGNTAAF  230 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccH--------HHHHHHHHhhC-CccCCCCHHHhhhhHHH
Confidence            9999999999999999999999999999999998765444321        22333333344 44999999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccccCcc
Q 023553          250 LASDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      |+|+-.+.+||+++.+|+|+..+++.+
T Consensus       231 LlSdLssgiTGei~yVD~G~~i~~m~~  257 (259)
T COG0623         231 LLSDLSSGITGEIIYVDSGYHIMGMGP  257 (259)
T ss_pred             HhcchhcccccceEEEcCCceeeccCC
Confidence            999999999999999999999998764

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-34  Score=247.65  Aligned_cols=229  Identities=27%  Similarity=0.337  Sum_probs=189.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++|+++||||++|||++++++|+++|++|++++|+.+..+.       ...+.++.||++|++++.++++.+.+.++++|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d   75 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------IPGVELLELDVTDDASVQAAVDEVIARAGRID   75 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence            46899999999999999999999999999999998765432       13567889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||+...  .++.+.+.+++++++++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|++++
T Consensus        76 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  153 (270)
T PRK06179         76 VLVNNAGVGLA--GAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE  153 (270)
T ss_pred             EEEECCCCCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence            99999998765  7788899999999999999999999999999998888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      ++++.++.|++++||+++.++||+++|++..............................+..+|+++|+.++.+++..
T Consensus       154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        154 GYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence            999999999999999999999999999987654321111000000000111111112356789999999999999753

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-34  Score=252.43  Aligned_cols=246  Identities=21%  Similarity=0.236  Sum_probs=188.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ..+++||+++||||++|||+++|+.|+++|++|++++|+.++.++..+++..   ...+.++.||+++.++++++++++.
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence            3568899999999999999999999999999999999998877776665532   2467889999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-------
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-------  162 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-------  162 (280)
                      +.++++|++|||||+...   +..+.+.++|+.++++|+.+++.+++.++|.|++. .++||++||.++..+.       
T Consensus        89 ~~~~~iD~li~nAG~~~~---~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~  164 (313)
T PRK05854         89 AEGRPIHLLINNAGVMTP---PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLN  164 (313)
T ss_pred             HhCCCccEEEECCccccC---CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccccc
Confidence            999999999999998653   33457788999999999999999999999999654 6899999999876542       


Q ss_pred             -----CCCccchhhHHHHHHHHHHHHHHH--CCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCC
Q 023553          163 -----LGPHAYTGSKHAVLGLNKNVAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG  235 (280)
Q Consensus       163 -----~~~~~Y~~sK~al~~~~~~la~e~--~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (280)
                           ++...|+.||+|+..|++.|++++  ...||+|++++||+++|++.................+..+.... .  -
T Consensus       165 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~  241 (313)
T PRK05854        165 WERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSAR-G--F  241 (313)
T ss_pred             ccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhc-c--c
Confidence                 346789999999999999999865  45789999999999999986543211110000000111111100 1  1


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCceeecEEEeC
Q 023553          236 TELTANDVANAVLFLASDEARYISGTNLMVD  266 (280)
Q Consensus       236 ~~~~~~dva~~i~~l~s~~~~~~~G~~i~~d  266 (280)
                      -+.++++.+...++++..... .+|.++.-+
T Consensus       242 ~~~~~~~ga~~~l~~a~~~~~-~~g~~~~~~  271 (313)
T PRK05854        242 LVGTVESAILPALYAATSPDA-EGGAFYGPR  271 (313)
T ss_pred             ccCCHHHHHHHhhheeeCCCC-CCCcEECCC
Confidence            245888999999888854322 246665443

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-34  Score=246.41  Aligned_cols=225  Identities=26%  Similarity=0.421  Sum_probs=192.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      |+++||||++|||+++++.|+++|++|++++|+.+.+++..+.+.. ..++.++.||+++++++.++++.+.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5799999999999999999999999999999998887777666543 356788999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +|||||+...  ..+.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|+++++
T Consensus        81 lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~  158 (270)
T PRK05650         81 IVNNAGVASG--GFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVA  158 (270)
T ss_pred             EEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHH
Confidence            9999998765  67888999999999999999999999999999987777999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      ++++++.|+.+.||++++|+||+++|++..............   ....      ......+++|+|+.++..+...
T Consensus       159 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        159 LSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQ---VGKL------LEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHH---HHHH------hhcCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999876543222111000   0000      0134579999999999998653

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.7e-34  Score=241.37  Aligned_cols=243  Identities=35%  Similarity=0.548  Sum_probs=205.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|++|||||+++||++++++|+++|++|+++.|+.. ..+...+.... ..++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            356789999999999999999999999999888666644 33333333322 3467889999999999999999998888


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++||+||....  ..+.+.+.+++++.+++|+.+++++++.+++++.+.+.+++|++||..+..+.++...|+.+|
T Consensus        83 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK  160 (249)
T PRK12825         83 GRIDILVNNAGIFED--KPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAK  160 (249)
T ss_pred             CCCCEEEECCccCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHH
Confidence            999999999997654  667788999999999999999999999999999877788999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++++++++.+++++.+.|++++.++||++.|++...........           .....+.+++++++|+++++.++++
T Consensus       161 ~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~dva~~~~~~~~  229 (249)
T PRK12825        161 AGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREA-----------KDAETPLGRSGTPEDIARAVAFLCS  229 (249)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHh-----------hhccCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999988999999999999999865543211100           0112234778999999999999998


Q ss_pred             CCCCceeecEEEeCCCcc
Q 023553          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      +...+++|+++.++||..
T Consensus       230 ~~~~~~~g~~~~i~~g~~  247 (249)
T PRK12825        230 DASDYITGQVIEVTGGVD  247 (249)
T ss_pred             ccccCcCCCEEEeCCCEe
Confidence            877899999999999975

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-34  Score=245.71  Aligned_cols=214  Identities=20%  Similarity=0.246  Sum_probs=180.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcch-HHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNL-GQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.+. +++..+++...  .++.++.||+++++++.++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            57899999999999999999999995 999999999875 66665555432  3688899999999999999999886 4


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||+|....  ..-...+.++..+++++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||
T Consensus        86 g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sK  163 (253)
T PRK07904         86 GDVDVAIVAFGLLGD--AEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTK  163 (253)
T ss_pred             CCCCEEEEeeecCCc--hhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHH
Confidence            899999999998643  111123455677899999999999999999999888889999999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+.+|+++++.|+.++||+|++++||+++|++.......                      ....+|+|+|+.++..+.
T Consensus       164 aa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~~----------------------~~~~~~~~~A~~i~~~~~  221 (253)
T PRK07904        164 AGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKEA----------------------PLTVDKEDVAKLAVTAVA  221 (253)
T ss_pred             HHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCCC----------------------CCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999986542110                      124689999999999996


Q ss_pred             CCC
Q 023553          253 DEA  255 (280)
Q Consensus       253 ~~~  255 (280)
                      ...
T Consensus       222 ~~~  224 (253)
T PRK07904        222 KGK  224 (253)
T ss_pred             cCC
Confidence            543

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=245.31  Aligned_cols=240  Identities=19%  Similarity=0.245  Sum_probs=193.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC--c
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT--L   95 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~--i   95 (280)
                      |+++||||++|||+++++.|+++|++|++++|+. +.+++..+..  ..++.++.+|+++++++.++++++.+.++.  +
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY--NSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc--CCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            7899999999999999999999999999999986 3444333222  246778899999999999999998877653  2


Q ss_pred             c--EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhhH
Q 023553           96 D--IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        96 d--~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +  ++|+|||...+. .++.+.+.++|.+.+++|+.+++.+++.++|.|++. ..++||++||..+..+.+++..|+++|
T Consensus        80 ~~~~~v~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  158 (251)
T PRK06924         80 SSIHLINNAGMVAPI-KPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK  158 (251)
T ss_pred             CceEEEEcceecccC-cccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence            2  899999986443 578889999999999999999999999999999765 357999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHC--CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          173 HAVLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       173 ~al~~~~~~la~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|+++|++.++.|++  +.||+|++|.||+++|++............   .....+. ... +.+++.+|+|+|+.++++
T Consensus       159 aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~~-~~~-~~~~~~~~~dva~~~~~l  233 (251)
T PRK06924        159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDF---TNLDRFI-TLK-EEGKLLSPEYVAKALRNL  233 (251)
T ss_pred             HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccc---hHHHHHH-HHh-hcCCcCCHHHHHHHHHHH
Confidence            999999999999975  468999999999999998653211100000   0011111 111 237889999999999999


Q ss_pred             cCCCCCceeecEEEeCC
Q 023553          251 ASDEARYISGTNLMVDG  267 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dg  267 (280)
                      +++. .+++|+.+.+|+
T Consensus       234 ~~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        234 LETE-DFPNGEVIDIDE  249 (251)
T ss_pred             Hhcc-cCCCCCEeehhh
Confidence            9864 789999999886

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=5.1e-34  Score=241.98  Aligned_cols=232  Identities=24%  Similarity=0.329  Sum_probs=192.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      ++++||||++|||+++++.|+++|++|++++|+.+.++...+.+.  .++.++.+|+++.+++.++++++.+.++++|++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--cceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            479999999999999999999999999999999887776655543  357788999999999999999999999999999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      |||||..... .++.+.+.++|++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.++...|+++|++++++
T Consensus        79 i~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~  157 (248)
T PRK10538         79 VNNAGLALGL-EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF  157 (248)
T ss_pred             EECCCccCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHH
Confidence            9999975422 457788999999999999999999999999999877789999999999988888899999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCceecccccc-CCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCc
Q 023553          179 NKNVAAELGKYGIRVNCVSPYAVATGLALA-HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~  257 (280)
                      ++.++.++.++||++++|.||++.|+.... ........      .......     ..+.+|+|+|++++++++....+
T Consensus       158 ~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~------~~~~~~~-----~~~~~~~dvA~~~~~l~~~~~~~  226 (248)
T PRK10538        158 SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGK------AEKTYQN-----TVALTPEDVSEAVWWVATLPAHV  226 (248)
T ss_pred             HHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHH------HHhhccc-----cCCCCHHHHHHHHHHHhcCCCcc
Confidence            999999999999999999999998544322 11111100      0000011     34579999999999999877666


Q ss_pred             eeecEEE
Q 023553          258 ISGTNLM  264 (280)
Q Consensus       258 ~~G~~i~  264 (280)
                      .+|+...
T Consensus       227 ~~~~~~~  233 (248)
T PRK10538        227 NINTLEM  233 (248)
T ss_pred             cchhhcc
Confidence            6666543

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-34  Score=247.89  Aligned_cols=250  Identities=23%  Similarity=0.305  Sum_probs=200.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++|+++||||+++||+++++.|+++|++|++++|+.+..++..+....   ...+.++.+|++|++++.+ ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            578999999999999999999999999999999998777666554432   2468889999999999999 899988899


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||...+  ..+.+.+.+++++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|+
T Consensus        81 ~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  158 (280)
T PRK06914         81 RIDLLVNNAGYANG--GFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKY  158 (280)
T ss_pred             CeeEEEECCccccc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHH
Confidence            99999999998765  6677889999999999999999999999999998777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh---hhh-hhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE---DAM-VGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      ++++|+++++.++.++||+++.++||+++|++.....+......   ... ...............++.+|+|+|+++++
T Consensus       159 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  238 (280)
T PRK06914        159 ALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVE  238 (280)
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence            99999999999999999999999999999998654322110000   000 00111111111223678899999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccc
Q 023553          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++....   +..+.+++|....
T Consensus       239 ~~~~~~~---~~~~~~~~~~~~~  258 (280)
T PRK06914        239 IAESKRP---KLRYPIGKGVKLM  258 (280)
T ss_pred             HHcCCCC---CcccccCCchHHH
Confidence            9976443   2456776665443

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=5.9e-34  Score=249.65  Aligned_cols=243  Identities=20%  Similarity=0.172  Sum_probs=191.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +.+|+++||||++|||+++|+.|+++| ++|++++|+.+..++..+.+... ..+.++.+|+++.++++++++++.++++
T Consensus         1 ~~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         1 QQKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            358899999999999999999999999 99999999988877776666432 4577889999999999999999988889


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC--CceEEEEcccccccc----------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIG----------  161 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~isS~~~~~~----------  161 (280)
                      ++|++|||||+..+. ....+.+.++|++++++|+.+++.+++.++|.|++++  .++||++||..+...          
T Consensus        81 ~iD~lI~nAG~~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  159 (314)
T TIGR01289        81 PLDALVCNAAVYFPT-AKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKA  159 (314)
T ss_pred             CCCEEEECCCccccC-ccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcc
Confidence            999999999985431 3345678899999999999999999999999997653  489999999876421          


Q ss_pred             -----------------------CCCCccchhhHHHHHHHHHHHHHHHC-CCCeEEEEEeCCce-eccccccCCCcchhh
Q 023553          162 -----------------------GLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRVNCVSPYAV-ATGLALAHLPEEERT  216 (280)
Q Consensus       162 -----------------------~~~~~~Y~~sK~al~~~~~~la~e~~-~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~  216 (280)
                                             ..++..|++||+|+..+++.+++++. ++||+|++|+||.+ .|++.+...+.... 
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~-  238 (314)
T TIGR01289       160 NLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRT-  238 (314)
T ss_pred             cccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHH-
Confidence                                   12356799999999999999999995 46899999999999 69987643221100 


Q ss_pred             hhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          217 EDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                           .+..+....   .+.+.+|++.++.++.++.......+|.++..++.
T Consensus       239 -----~~~~~~~~~---~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~  282 (314)
T TIGR01289       239 -----LFPPFQKYI---TKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGNR  282 (314)
T ss_pred             -----HHHHHHHHH---hccccchhhhhhhhHHhhcCcccCCCceeeecCCc
Confidence                 011111111   13467899999999998875444457887766554

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.8e-36  Score=228.71  Aligned_cols=244  Identities=34%  Similarity=0.497  Sum_probs=214.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +.+|-+++||||.+|+|++.+++|+++|++|++.+-.+.+.++..+++.  +++.|...|++++++++..++..+.+||+
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg--~~~vf~padvtsekdv~aala~ak~kfgr   83 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG--GKVVFTPADVTSEKDVRAALAKAKAKFGR   83 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC--CceEEeccccCcHHHHHHHHHHHHhhccc
Confidence            3578999999999999999999999999999999999988888888887  46788899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCC----CCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC------CCceEEEEccccccccCCC
Q 023553           95 LDIMVNNAGISGAPC----PDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        95 id~li~~ag~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~g~iv~isS~~~~~~~~~  164 (280)
                      +|.++||||+....-    ..-...+.|+|++.+++|+.|.|+.++.-.-+|-++      .+|-||+..|+++..+.-+
T Consensus        84 ld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g  163 (260)
T KOG1199|consen   84 LDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG  163 (260)
T ss_pred             eeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc
Confidence            999999999864310    123356899999999999999999999998888543      2478999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      +..|++||.++.+++--++++++..|||++.|.||.++||+......          ....|+.+..+.-.|++.|.|-+
T Consensus       164 qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpe----------kv~~fla~~ipfpsrlg~p~eya  233 (260)
T KOG1199|consen  164 QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPE----------KVKSFLAQLIPFPSRLGHPHEYA  233 (260)
T ss_pred             hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhH----------HHHHHHHHhCCCchhcCChHHHH
Confidence            99999999999999999999999999999999999999999765432          25566666666668999999999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          245 NAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      .++-.+.  ++.++||++|.+||-+.++
T Consensus       234 hlvqaii--enp~lngevir~dgalrm~  259 (260)
T KOG1199|consen  234 HLVQAII--ENPYLNGEVIRFDGALRMP  259 (260)
T ss_pred             HHHHHHH--hCcccCCeEEEecceecCC
Confidence            9999998  5779999999999987764

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-34  Score=239.81  Aligned_cols=229  Identities=27%  Similarity=0.334  Sum_probs=188.3

Q ss_pred             EEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEEEC
Q 023553           22 LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNN  101 (280)
Q Consensus        22 lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~  101 (280)
                      +||||++|||+++++.|+++|++|++++|+.+..+...+.+.....+.++.||+++++++.+++++    .+++|++|||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE----AGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh----cCCCCEEEEC
Confidence            699999999999999999999999999999877776666554335677889999999998887764    4789999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHHHH
Q 023553          102 AGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN  181 (280)
Q Consensus       102 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~  181 (280)
                      +|....  .++.+.+.+++++++++|+.+++++++  .+.+  ++.++||++||..+..+.++...|+++|+++++++++
T Consensus        77 ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         77 AADTPG--GPVRALPLAAAQAAMDSKFWGAYRVAR--AARI--APGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             CCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            998765  677788999999999999999999999  4454  3468999999999999989999999999999999999


Q ss_pred             HHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeec
Q 023553          182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT  261 (280)
Q Consensus       182 la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~  261 (280)
                      ++.|+..  |++++++||+++|++.....+...  ..    ......+. .+.+++.+|+|+|+++++|++.  .+++|+
T Consensus       151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~--~~----~~~~~~~~-~~~~~~~~~~dva~~~~~l~~~--~~~~G~  219 (230)
T PRK07041        151 LALELAP--VRVNTVSPGLVDTPLWSKLAGDAR--EA----MFAAAAER-LPARRVGQPEDVANAILFLAAN--GFTTGS  219 (230)
T ss_pred             HHHHhhC--ceEEEEeecccccHHHHhhhccch--HH----HHHHHHhc-CCCCCCcCHHHHHHHHHHHhcC--CCcCCc
Confidence            9999975  999999999999998654222110  00    11111222 2336788999999999999973  589999


Q ss_pred             EEEeCCCccc
Q 023553          262 NLMVDGGFTS  271 (280)
Q Consensus       262 ~i~~dgG~~~  271 (280)
                      .+.+|||...
T Consensus       220 ~~~v~gg~~~  229 (230)
T PRK07041        220 TVLVDGGHAI  229 (230)
T ss_pred             EEEeCCCeec
Confidence            9999999753

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=3.7e-34  Score=247.83  Aligned_cols=237  Identities=26%  Similarity=0.401  Sum_probs=191.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.. ..++.++.+|+++.+++.++++.+.+.++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999998777766666543 34678899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCC------ceEEEEccccccccCCCCcc
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK------GTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------g~iv~isS~~~~~~~~~~~~  167 (280)
                      ++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|+++..      |+||++||.++..+.++...
T Consensus        83 ~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  160 (287)
T PRK06194         83 AVHLLFNNAGVGAG--GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGI  160 (287)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcc
Confidence            99999999999765  67788999999999999999999999999999987654      79999999999999899999


Q ss_pred             chhhHHHHHHHHHHHHHHHCC--CCeEEEEEeCCceeccccccCCCcchhh------hhhhhhhHHHHhhhccCCCCCCC
Q 023553          168 YTGSKHAVLGLNKNVAAELGK--YGIRVNCVSPYAVATGLALAHLPEEERT------EDAMVGFRNFVARNANMQGTELT  239 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~--~gi~v~~v~pg~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  239 (280)
                      |+++|++++.|++.++.++..  .+|++++++||++.|++...........      .............. .. ....+
T Consensus       161 Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~s  238 (287)
T PRK06194        161 YNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKA-VG-SGKVT  238 (287)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhh-hh-ccCCC
Confidence            999999999999999999874  5799999999999999875432111000      00000001111110 01 12379


Q ss_pred             HHHHHHHHHHhcCCCC
Q 023553          240 ANDVANAVLFLASDEA  255 (280)
Q Consensus       240 ~~dva~~i~~l~s~~~  255 (280)
                      ++|+|+.++.++....
T Consensus       239 ~~dva~~i~~~~~~~~  254 (287)
T PRK06194        239 AEEVAQLVFDAIRAGR  254 (287)
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            9999999999885443

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=9.9e-34  Score=237.31  Aligned_cols=192  Identities=26%  Similarity=0.345  Sum_probs=176.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      -.++.+|.|+|||+.+|+|+.+|++|.++|..|++.+-+++..+.+..+.+ +++...++.|++++++++++.+.+++..
T Consensus        24 ~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~-s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   24 LDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK-SPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             ccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc-CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            345789999999999999999999999999999999988888777777664 4667778999999999999999999887


Q ss_pred             --CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           93 --GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        93 --g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                        .++..||||||++... ++.+..+.+++++++++|+.|++.++++++|+++ +.+||||++||+.|..+.|..++|++
T Consensus       103 ~~~gLwglVNNAGi~~~~-g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr-~arGRvVnvsS~~GR~~~p~~g~Y~~  180 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGISGFL-GPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLR-RARGRVVNVSSVLGRVALPALGPYCV  180 (322)
T ss_pred             ccccceeEEecccccccc-CccccccHHHHHHHHhhhhhhHHHHHHHHHHHHH-hccCeEEEecccccCccCcccccchh
Confidence              3699999999988654 8899999999999999999999999999999985 45699999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccc
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLAL  207 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~  207 (280)
                      ||+|++.|+.+|++|+.++||+|..|.||.++|++..
T Consensus       181 SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  181 SKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             hHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            9999999999999999999999999999999999975

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=2.4e-33  Score=238.12  Aligned_cols=242  Identities=39%  Similarity=0.574  Sum_probs=199.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch--HHHHHHHhCCC--CCeEEEecCCCC-HHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL--GQQVCQSLGGE--PDTFFCHCDVTK-EEDVCSAVDLTV   89 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~--~~~~~~~~~~~--~~~~~~~~D~~~-~~~~~~~~~~~~   89 (280)
                      ++.+|+++||||++|||+++|+.|+++|+.|+++.++.+.  .+...+.....  ..+.+..+|+++ .++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999888887654  33333322211  257778899998 999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC-ccc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP-HAY  168 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~-~~Y  168 (280)
                      +.+|++|++|||||+.... .++.+.+.++|++++++|+.+++.+++.+.|.++++   +||++||..+. +.++. ..|
T Consensus        82 ~~~g~id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y  156 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPD-APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAY  156 (251)
T ss_pred             HHcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchH
Confidence            9999999999999997541 268889999999999999999999999888888733   99999999999 87774 999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+++|++.++.|+.++||++++|+||+++|++........ ...     ........  +..++..|++++..+.
T Consensus       157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~-~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~  228 (251)
T COG1028         157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAE-LEA-----LKRLAARI--PLGRLGTPEEVAAAVA  228 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhh-hhH-----HHHHHhcC--CCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999987654432 000     01111111  2247889999999999


Q ss_pred             HhcCCC-CCceeecEEEeCCCc
Q 023553          249 FLASDE-ARYISGTNLMVDGGF  269 (280)
Q Consensus       249 ~l~s~~-~~~~~G~~i~~dgG~  269 (280)
                      ++.+.. ..+++|+.+.+|||.
T Consensus       229 ~~~~~~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         229 FLASDEAASYITGQTLPVDGGL  250 (251)
T ss_pred             HHcCcchhccccCCEEEeCCCC
Confidence            998764 668999999999986

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=4.8e-33  Score=235.56  Aligned_cols=241  Identities=29%  Similarity=0.354  Sum_probs=197.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++++|||||+++||+.++++|+++|++|++++|+.+ ..+...+.+..  ...+.++.+|+++++++.++++++.+++
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46799999999999999999999999999999998743 33433333322  2357788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++||+||....  .++.+.+.++++..+++|+.+++.+++++.|.+.++ .+.+++++|..+..+.++...|+.||
T Consensus        84 ~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK  160 (249)
T PRK09135         84 GRLDALVNNASSFYP--TPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAK  160 (249)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHHH
Confidence            999999999998755  567778889999999999999999999999998554 47889888888877888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++++.+++.++.++.+ +++++++.||++.|++....++...        ..... . ..+...+.+++|+++++.+++.
T Consensus       161 ~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~--------~~~~~-~-~~~~~~~~~~~d~a~~~~~~~~  229 (249)
T PRK09135        161 AALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEA--------RQAIL-A-RTPLKRIGTPEDIAEAVRFLLA  229 (249)
T ss_pred             HHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHH--------HHHHH-h-cCCcCCCcCHHHHHHHHHHHcC
Confidence            9999999999999965 6999999999999998543322110        11111 1 1223667889999999998886


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      + ..+.+|+++.+++|...
T Consensus       230 ~-~~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        230 D-ASFITGQILAVDGGRSL  247 (249)
T ss_pred             c-cccccCcEEEECCCeec
Confidence            5 45679999999999853

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-33  Score=239.58  Aligned_cols=219  Identities=31%  Similarity=0.393  Sum_probs=189.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH-hCCccE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK-FGTLDI   97 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id~   97 (280)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+.+. ..++.+++||+++.+++.++++.+.+. ++++|+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-AGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            789999999999999999999999999999999988777766554 346788999999999999999988776 689999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +|||||....  ..+.+.+.+++++++++|+.+++.+++++.+.|++++.++||++||..+..+.++...|+.||+++++
T Consensus        81 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  158 (260)
T PRK08267         81 LFNNAGILRG--GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRG  158 (260)
T ss_pred             EEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHH
Confidence            9999998765  67888999999999999999999999999999988778999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+++++.++.++||++++|.||+++|++........ .       . .....    .+...+|++++++++.++..
T Consensus       159 ~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~-~-------~-~~~~~----~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        159 LTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEV-D-------A-GSTKR----LGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHhcccCcEEEEEecCCcCCcccccccchh-h-------h-hhHhh----ccCCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999999866411100 0       0 00001    13357899999999999953

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-33  Score=239.79  Aligned_cols=232  Identities=22%  Similarity=0.272  Sum_probs=191.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ..+|+++||||+++||+++++.|+++|+.|++++|+.+..++..+.+.. ..++.++.+|+++++++.++++++.+.+++
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            5678999999999999999999999999999999987766665554432 246778899999999999999999988899


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||....  ..+.+.+.+++++.+++|+.++++++++++|.|.+++.++||++||..+..+.++...|+++|++
T Consensus        88 id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  165 (274)
T PRK07775         88 IEVLVSGAGDTYF--GKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAG  165 (274)
T ss_pred             CCEEEECCCcCCC--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHH
Confidence            9999999998654  66778899999999999999999999999999987777899999999998888888999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      ++.+++.++.++.++||++++++||+++|++.....+..  ....   ............+++.+++|+|++++++++..
T Consensus       166 ~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        166 LEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEV--IGPM---LEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhh--hhHH---HHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence            999999999999989999999999999999754422211  0000   01111101112356899999999999999753

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-33  Score=237.68  Aligned_cols=214  Identities=21%  Similarity=0.276  Sum_probs=188.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +|+++||||++|||++++++|+++|++|++++|+.+..++..+.+..   ...+.++.||+++++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999999998877766555432   346888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC-CccchhhHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-PHAYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~-~~~Y~~sK~  173 (280)
                      +|++|||||+...  ..+.+.+.+.+++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.++ ...|+.||+
T Consensus        82 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  159 (248)
T PRK08251         82 LDRVIVNAGIGKG--ARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKA  159 (248)
T ss_pred             CCEEEECCCcCCC--CCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHH
Confidence            9999999999765  6677888999999999999999999999999998877899999999998888775 689999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +++.+++.++.++...||++++++||+++|++.......                      ....++++.+++++..+..
T Consensus       160 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~----------------------~~~~~~~~~a~~i~~~~~~  217 (248)
T PRK08251        160 GVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKST----------------------PFMVDTETGVKALVKAIEK  217 (248)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccccC----------------------CccCCHHHHHHHHHHHHhc
Confidence            999999999999998899999999999999986543210                      2356899999999998865


Q ss_pred             CC
Q 023553          254 EA  255 (280)
Q Consensus       254 ~~  255 (280)
                      ..
T Consensus       218 ~~  219 (248)
T PRK08251        218 EP  219 (248)
T ss_pred             CC
Confidence            43

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.2e-33  Score=235.39  Aligned_cols=235  Identities=21%  Similarity=0.354  Sum_probs=195.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++||||+++||.++++.|+++|++|++++|+.+..+...+.+.....+.++.||+++++++.++++++...+++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999999999998877766555543346788999999999999999999888899


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-cCCCCccchhhHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GGLGPHAYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-~~~~~~~Y~~sK~  173 (280)
                      +|.+|+++|....  ..+.  +.+++++++++|+.+++.+++.++|.|.+  .+++|++||..+.. +.+....|+++|+
T Consensus        82 id~ii~~ag~~~~--~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK~  155 (238)
T PRK05786         82 IDGLVVTVGGYVE--DTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAKA  155 (238)
T ss_pred             CCEEEEcCCCcCC--CchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHHH
Confidence            9999999997543  3333  33889999999999999999999999843  58999999987753 5567788999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +++.+++.++.++...||+++.++||++.|++....    .        ..    .....-....+++|+++.+.+++++
T Consensus       156 ~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~----~--------~~----~~~~~~~~~~~~~~va~~~~~~~~~  219 (238)
T PRK05786        156 GLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER----N--------WK----KLRKLGDDMAPPEDFAKVIIWLLTD  219 (238)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh----h--------hh----hhccccCCCCCHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999864210    0        00    0011113467999999999999998


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+++.+|||...
T Consensus       220 ~~~~~~g~~~~~~~~~~~  237 (238)
T PRK05786        220 EADWVDGVVIPVDGGARL  237 (238)
T ss_pred             cccCccCCEEEECCcccc
Confidence            777899999999998753

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-33  Score=238.20  Aligned_cols=243  Identities=20%  Similarity=0.272  Sum_probs=195.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .|++|||||+++||++++++|+++|++|++++|+.+..+...+...  .++.++.+|+++.+++.++++++.+.++++|+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYG--DRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999999999999999999999877666555433  36778899999999999999999988899999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +|||||....  .+..+.+.+++++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|++||++++.
T Consensus        80 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (276)
T PRK06482         80 VVSNAGYGLF--GAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG  157 (276)
T ss_pred             EEECCCCCCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence            9999998765  66778889999999999999999999999999987777899999999998888899999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcch---hhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE---RTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      |+++++.+++++||+++.+.||.+.|++.........   ........+......  ....-..+++|++++++.++...
T Consensus       158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~a~~~~~~~~  235 (276)
T PRK06482        158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD--GSFAIPGDPQKMVQAMIASADQT  235 (276)
T ss_pred             HHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh--ccCCCCCCHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999988543221110   000110111111111  11133578999999999998643


Q ss_pred             CCceeecEEEeCCCc
Q 023553          255 ARYISGTNLMVDGGF  269 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~  269 (280)
                      .   .+..+++.+|-
T Consensus       236 ~---~~~~~~~g~~~  247 (276)
T PRK06482        236 P---APRRLTLGSDA  247 (276)
T ss_pred             C---CCeEEecChHH
Confidence            2   24556666653

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=5.8e-33  Score=233.66  Aligned_cols=236  Identities=37%  Similarity=0.530  Sum_probs=199.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      +||||++++||+.++++|+++|++|++++|+. +..+...+.+.. ..++.++.+|++++++++++++.+.+.++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998875 344444444432 2467889999999999999999999999999999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      ||++|....  ..+.+.+.+++++.+++|+.+.+.+++.+.+.+.+.+.++++++||..+..+.+++..|+++|++++.+
T Consensus        81 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~  158 (239)
T TIGR01830        81 VNNAGITRD--NLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGF  158 (239)
T ss_pred             EECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHH
Confidence            999998754  556778889999999999999999999999998776778999999999999989999999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCce
Q 023553          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYI  258 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~  258 (280)
                      ++.++.++...|++++.+.||+++|++.....+.  .       ...+ ... .+.+++.+++|++++++++++....+.
T Consensus       159 ~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~--~-------~~~~-~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~  227 (239)
T TIGR01830       159 TKSLAKELASRNITVNAVAPGFIDTDMTDKLSEK--V-------KKKI-LSQ-IPLGRFGTPEEVANAVAFLASDEASYI  227 (239)
T ss_pred             HHHHHHHHhhcCeEEEEEEECCCCChhhhhcChH--H-------HHHH-Hhc-CCcCCCcCHHHHHHHHHHHhCcccCCc
Confidence            9999999988999999999999999875432111  0       0111 111 223678899999999999998777789


Q ss_pred             eecEEEeCCCc
Q 023553          259 SGTNLMVDGGF  269 (280)
Q Consensus       259 ~G~~i~~dgG~  269 (280)
                      +|+.+++|+|+
T Consensus       228 ~g~~~~~~~g~  238 (239)
T TIGR01830       228 TGQVIHVDGGM  238 (239)
T ss_pred             CCCEEEeCCCc
Confidence            99999999996

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-33  Score=238.79  Aligned_cols=236  Identities=22%  Similarity=0.216  Sum_probs=186.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+ ..+...+.++. ..++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999998753 34444444432 2467788999999999999999999998


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-----ccCCCCcc
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-----IGGLGPHA  167 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-----~~~~~~~~  167 (280)
                      +++|++|||||....  .   ..   ++...+++|+.+++++++++.|.|.+  .+++|++||..+.     .+.+.+..
T Consensus        83 ~~~d~vi~~ag~~~~--~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~  152 (248)
T PRK07806         83 GGLDALVLNASGGME--S---GM---DEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEP  152 (248)
T ss_pred             CCCcEEEECCCCCCC--C---CC---CcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccH
Confidence            999999999986422  1   11   24678999999999999999999843  4799999996553     23345678


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |++||++++.+++.++.+++++||+|+++.||.+.|++......... . ..   ..    ....+.+++++|+|+|+++
T Consensus       153 Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~-~-~~---~~----~~~~~~~~~~~~~dva~~~  223 (248)
T PRK07806        153 VARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLN-P-GA---IE----ARREAAGKLYTVSEFAAEV  223 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCC-H-HH---HH----HHHhhhcccCCHHHHHHHH
Confidence            99999999999999999999999999999999999987543221100 0 00   00    1112347899999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCccc
Q 023553          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++++  +.+.+|+++.++||...
T Consensus       224 ~~l~~--~~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        224 ARAVT--APVPSGHIEYVGGADYF  245 (248)
T ss_pred             HHHhh--ccccCccEEEecCccce
Confidence            99997  45789999999999754

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-33  Score=247.15  Aligned_cols=240  Identities=23%  Similarity=0.226  Sum_probs=189.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC---CCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +.++++|+++||||++|||+++|+.|+++|++|++++|+.+..++..+.+.   ...++.++.+|+++.+++.++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999877665554443   23467888999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc---------
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI---------  160 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~---------  160 (280)
                      ++++++|++|||||+...    ....+.++++..+++|+.+++.+++.++|.|++.+.++||++||..+..         
T Consensus        91 ~~~~~iD~li~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~  166 (306)
T PRK06197         91 AAYPRIDLLINNAGVMYT----PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDL  166 (306)
T ss_pred             hhCCCCCEEEECCccccC----CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcccc
Confidence            999999999999998643    2346778899999999999999999999999877778999999987543         


Q ss_pred             ----cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEE--eCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCC
Q 023553          161 ----GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV--SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ  234 (280)
Q Consensus       161 ----~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v--~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (280)
                          +.++...|++||+|++.|++.++++++++|++|+++  +||+++|++.+..... .      .......   .+. 
T Consensus       167 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~-~------~~~~~~~---~~~-  235 (306)
T PRK06197        167 QWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA-L------RPVATVL---APL-  235 (306)
T ss_pred             CcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH-H------HHHHHHH---Hhh-
Confidence                123456899999999999999999998888777655  6999999987653221 0      0011110   011 


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       235 ~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                       ...++++-+...++++.. ....+|..+..||+.
T Consensus       236 -~~~~~~~g~~~~~~~~~~-~~~~~g~~~~~~~~~  268 (306)
T PRK06197        236 -LAQSPEMGALPTLRAATD-PAVRGGQYYGPDGFG  268 (306)
T ss_pred             -hcCCHHHHHHHHHHHhcC-CCcCCCeEEccCccc
Confidence             134677777777777754 345688888877755

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-33  Score=228.73  Aligned_cols=197  Identities=21%  Similarity=0.202  Sum_probs=170.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +++||||++|||+++++.|+++ ++|++++|+..                .+.||+++++++++++++    ++++|++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~----~~~id~lv   60 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------DVQVDITDPASIRALFEK----VGKVDAVV   60 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------ceEecCCChHHHHHHHHh----cCCCCEEE
Confidence            6999999999999999999999 99999998753                357999999999887764    47999999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHH
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN  179 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  179 (280)
                      ||||....  .++.+.+.++|++.+++|+.+++++++.++|+|.+  .++|+++||..+..+.+++..|+++|+|+++|+
T Consensus        61 ~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~  136 (199)
T PRK07578         61 SAAGKVHF--APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGALEGFV  136 (199)
T ss_pred             ECCCCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHHHHHH
Confidence            99998654  67888999999999999999999999999999954  489999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCcee
Q 023553          180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYIS  259 (280)
Q Consensus       180 ~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~  259 (280)
                      ++++.|+ ++||+|++|+||+++|++.....               +     .+.....+|+|+|+.+..+++.   ..+
T Consensus       137 ~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~~---------------~-----~~~~~~~~~~~~a~~~~~~~~~---~~~  192 (199)
T PRK07578        137 KAAALEL-PRGIRINVVSPTVLTESLEKYGP---------------F-----FPGFEPVPAARVALAYVRSVEG---AQT  192 (199)
T ss_pred             HHHHHHc-cCCeEEEEEcCCcccCchhhhhh---------------c-----CCCCCCCCHHHHHHHHHHHhcc---cee
Confidence            9999999 88999999999999998632110               0     0013467999999999999963   589


Q ss_pred             ecEEEe
Q 023553          260 GTNLMV  265 (280)
Q Consensus       260 G~~i~~  265 (280)
                      |+++.+
T Consensus       193 g~~~~~  198 (199)
T PRK07578        193 GEVYKV  198 (199)
T ss_pred             eEEecc
Confidence            998875

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=236.66  Aligned_cols=228  Identities=23%  Similarity=0.296  Sum_probs=184.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      |++|||||++|||+++++.|+++|++|++++|+.+..+...+     ..+.++.+|+++++++.++++.+.+.++++|++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   76 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-----AGFTAVQLDVNDGAALARLAEELEAEHGGLDVL   76 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            789999999999999999999999999999999876655432     135678899999999999999999989999999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      |||||....  .++.+.+.+++++.+++|+.+++.++++++|.|.+ +.|+||++||..+..+.+....|+++|++++.+
T Consensus        77 i~~ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  153 (274)
T PRK05693         77 INNAGYGAM--GPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL  153 (274)
T ss_pred             EECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            999998654  67788899999999999999999999999999854 458999999999999989999999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh-hhhhh---hHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-DAMVG---FRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++++.|++++||+|++++||+++|++............ ....+   ...+............+|+++|+.++..+...
T Consensus       154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~  233 (274)
T PRK05693        154 SDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQS  233 (274)
T ss_pred             HHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999998664322111000 00000   00110000011134568999999999988643

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-32  Score=231.68  Aligned_cols=212  Identities=21%  Similarity=0.210  Sum_probs=184.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      +|+++||||++|||+++++.|+++|++|++++|+.+..+...+.+..  ..++.++.||+++++++.++++++.+   ++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~   77 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LP   77 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence            47899999999999999999999999999999998877665555432  34788899999999999999887754   57


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||+|....  ..+.+.+.+++.+.+++|+.+++++++++.|.|.+++.++++++||..+..+.++...|+++|+++
T Consensus        78 d~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  155 (243)
T PRK07102         78 DIVLIAVGTLGD--QAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAAL  155 (243)
T ss_pred             CEEEECCcCCCC--cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHH
Confidence            999999998765  667788999999999999999999999999999887889999999999988888999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      ++++++++.|+.+.||++++|+||+++|++......                     +...+.+|+++++.++.+++...
T Consensus       156 ~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~~---------------------~~~~~~~~~~~a~~i~~~~~~~~  214 (243)
T PRK07102        156 TAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLKL---------------------PGPLTAQPEEVAKDIFRAIEKGK  214 (243)
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCcccChhhhccCC---------------------CccccCCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999997543210                     00346789999999999997654

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.8e-34  Score=224.31  Aligned_cols=189  Identities=28%  Similarity=0.335  Sum_probs=171.9

Q ss_pred             CCcEEEEEcCC-ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH-HhCC
Q 023553           17 VGRVALITGGA-TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE-KFGT   94 (280)
Q Consensus        17 ~~k~vlItGas-~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~   94 (280)
                      ..|+++|||++ ||||.++++.|++.|+.|+.++|+.+...++....    ......+|+++++++..+..++.+ .+|+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~----gl~~~kLDV~~~~~V~~v~~evr~~~~Gk   81 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF----GLKPYKLDVSKPEEVVTVSGEVRANPDGK   81 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh----CCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence            57899999886 89999999999999999999999999887776433    366789999999999999999998 6799


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|+|+||||..-.  .+..+.+.++.++.|++|++|.+++++++. +++.+.+|.||++.|..+..|.|..+.|++||+|
T Consensus        82 ld~L~NNAG~~C~--~Pa~d~~i~ave~~f~vNvfG~irM~~a~~-h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAA  158 (289)
T KOG1209|consen   82 LDLLYNNAGQSCT--FPALDATIAAVEQCFKVNVFGHIRMCRALS-HFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAA  158 (289)
T ss_pred             eEEEEcCCCCCcc--cccccCCHHHHHhhhccceeeeehHHHHHH-HHHHHccceEEEecceeEEeccchhhhhhHHHHH
Confidence            9999999998654  778899999999999999999999999999 5556778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE  212 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~  212 (280)
                      ++++++.|+.|++++||+|..+.||-|.|++..+.++.
T Consensus       159 ihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~l~~  196 (289)
T KOG1209|consen  159 IHAYARTLRLELKPFGVRVINAITGGVATDIADKRLPE  196 (289)
T ss_pred             HHHhhhhcEEeeeccccEEEEecccceecccccCCCcc
Confidence            99999999999999999999999999999998775543

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-32  Score=233.75  Aligned_cols=224  Identities=28%  Similarity=0.424  Sum_probs=189.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +++++||||+++||+++++.|+++|++|++++|+.+..++..+.+.. ..++.++.+|+++++++.++++++.++++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999999999999999998776666555543 24678889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCC-CHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023553           97 IMVNNAGISGAPCPDIREA-DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      ++|||||....  ..+.+. +.+++++.+++|+.+++.+++.++|.|.+. .+++|++||..+..+.+++..|+++|+++
T Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~  157 (263)
T PRK06181         81 ILVNNAGITMW--SRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHAL  157 (263)
T ss_pred             EEEECCCcccc--cchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHH
Confidence            99999998765  667777 899999999999999999999999998644 58999999999998888999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++++.++.++.+++|+++++.||++.|++............          ........++++|+|+|++++++++..
T Consensus       158 ~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        158 HGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPL----------GKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHHHhhhcCceEEEEecCccccCcchhhcccccccc----------ccccccccCCCCHHHHHHHHHHHhhCC
Confidence            999999999999999999999999999998765432211100          000011147899999999999999754

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-32  Score=228.04  Aligned_cols=225  Identities=32%  Similarity=0.438  Sum_probs=193.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+.+++++||||+++||++++++|+++|++|++++|+++..++..+.+.....+.++.+|+++++++.++++++.+.+++
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35689999999999999999999999999999999998877777666654356888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++||++|....  .++.+.+.+++++.+++|+.+++.+++++++.| +++.++||++||..+..+..+...|+.+|++
T Consensus        83 ~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a  159 (237)
T PRK07326         83 LDVLIANAGVGHF--APVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKFG  159 (237)
T ss_pred             CCEEEECCCCCCC--CchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHHHHHHH
Confidence            9999999998654  667889999999999999999999999999998 4456899999999988888888999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      ++++++.++.++...|++++++.||++.|++........          .          ....+++|+++.++++++..
T Consensus       160 ~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~----------~----------~~~~~~~d~a~~~~~~l~~~  219 (237)
T PRK07326        160 LVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK----------D----------AWKIQPEDIAQLVLDLLKMP  219 (237)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh----------h----------hccCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999998754322110          0          12468999999999999876


Q ss_pred             CCceeecE
Q 023553          255 ARYISGTN  262 (280)
Q Consensus       255 ~~~~~G~~  262 (280)
                      ...+.+++
T Consensus       220 ~~~~~~~~  227 (237)
T PRK07326        220 PRTLPSKI  227 (237)
T ss_pred             ccccccce
Confidence            54444433

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=1.8e-32  Score=218.95  Aligned_cols=223  Identities=23%  Similarity=0.284  Sum_probs=183.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEE-EecCcchH-HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--C
Q 023553           19 RVALITGGATGIGESTVRLFHKH-GAKVCI-ADVQDNLG-QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~-g~~Vi~-~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   93 (280)
                      |.++||||++|||..++++|.+. |-.+++ ..|+.++. +++........+++.++.|++..+++..+++++.+..  .
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            55999999999999999999976 666555 45556663 3332222334689999999999999999999999884  5


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-----------CceEEEEccccccccC
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-----------KGTIISICSVAGAIGG  162 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----------~g~iv~isS~~~~~~~  162 (280)
                      ++|++|||||+.... ....+.+.+.|-+.+++|..+++++.|+|+|++++..           ++.||++||..+..+.
T Consensus        84 GlnlLinNaGi~~~y-~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~  162 (249)
T KOG1611|consen   84 GLNLLINNAGIALSY-NTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG  162 (249)
T ss_pred             CceEEEeccceeeec-ccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence            899999999998653 4555677888999999999999999999999997653           2479999998887553


Q ss_pred             ---CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCC
Q 023553          163 ---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT  239 (280)
Q Consensus       163 ---~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (280)
                         .++.+|..||+|++.|+|+++.|+++.+|-|..+|||||.|+|....                          ...+
T Consensus       163 ~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~--------------------------a~lt  216 (249)
T KOG1611|consen  163 FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK--------------------------AALT  216 (249)
T ss_pred             CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC--------------------------cccc
Confidence               34679999999999999999999999999999999999999997632                          3457


Q ss_pred             HHHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          240 ANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       240 ~~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      +|+-+..++..+..-...-+|.+++.||-
T Consensus       217 veeSts~l~~~i~kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  217 VEESTSKLLASINKLKNEHNGGFFNRDGT  245 (249)
T ss_pred             hhhhHHHHHHHHHhcCcccCcceEccCCC
Confidence            88888888877776666778999988874

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.6e-31  Score=235.11  Aligned_cols=241  Identities=18%  Similarity=0.125  Sum_probs=187.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++.++|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+.. ...+.++.+|+++.+++.++++++.+..
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            346799999999999999999999999999999999998887777666642 3467888999999999999999988777


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCC--ceEEEEcccccccc---------
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK--GTIISICSVAGAIG---------  161 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--g~iv~isS~~~~~~---------  161 (280)
                      +++|++|||||+.... ....+.+.++|+..+++|+.+++.+++.++|.|++.+.  ++||++||.....+         
T Consensus        82 ~~iD~li~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~  160 (322)
T PRK07453         82 KPLDALVCNAAVYMPL-LKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP  160 (322)
T ss_pred             CCccEEEECCcccCCC-CCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence            8999999999986431 23346788999999999999999999999999977653  69999999754320         


Q ss_pred             --------------------------CCCCccchhhHHHHHHHHHHHHHHHC-CCCeEEEEEeCCce-eccccccCCCcc
Q 023553          162 --------------------------GLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRVNCVSPYAV-ATGLALAHLPEE  213 (280)
Q Consensus       162 --------------------------~~~~~~Y~~sK~al~~~~~~la~e~~-~~gi~v~~v~pg~v-~t~~~~~~~~~~  213 (280)
                                                ..+..+|+.||.+...+++.+++++. .+||++++++||+| .|++.+......
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~  240 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLF  240 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHH
Confidence                                      11246899999999999999999995 46999999999999 588765432210


Q ss_pred             hhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEE
Q 023553          214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLM  264 (280)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~  264 (280)
                             .....++.+.  ......+++..++.+++++.......+|.++.
T Consensus       241 -------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        241 -------QKLFPWFQKN--ITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             -------HHHHHHHHHH--HhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence                   0011111110  01234678888888888776544456887776

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-32  Score=259.87  Aligned_cols=219  Identities=22%  Similarity=0.288  Sum_probs=189.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|+++||||++|||+++++.|+++|++|++++|+++.+++..+.+.. ..++.++.||+++.+++.++++++.+.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            357899999999999999999999999999999999998887777666532 3468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCC--CHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREA--DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +++|++|||||+...  ..+.+.  +.+++++++++|+.+++.+++.++|.|++++.|+||++||.++..+.++...|++
T Consensus       447 g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  524 (657)
T PRK07201        447 GHVDYLVNNAGRSIR--RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVA  524 (657)
T ss_pred             CCCCEEEECCCCCCC--CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHH
Confidence            999999999998643  333322  3688999999999999999999999998888899999999999988899999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+++++|+++++.|++++||+|++|+||+++|++.......                   . .....+|+++|+.++..
T Consensus       525 sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~-------------------~-~~~~~~~~~~a~~i~~~  584 (657)
T PRK07201        525 SKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRY-------------------N-NVPTISPEEAADMVVRA  584 (657)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccccc-------------------c-CCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999986432100                   0 02357899999999987


Q ss_pred             cCCC
Q 023553          251 ASDE  254 (280)
Q Consensus       251 ~s~~  254 (280)
                      +...
T Consensus       585 ~~~~  588 (657)
T PRK07201        585 IVEK  588 (657)
T ss_pred             HHhC
Confidence            7543

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=227.10  Aligned_cols=225  Identities=18%  Similarity=0.201  Sum_probs=178.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHH-HHHHh---CC
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDL-TVEKF---GT   94 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~---g~   94 (280)
                      ++++||||++|||++++++|+++|++|++++|+.+...  ..  ....++.++++|+++.+++.+++++ +.+.+   ++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   77 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AA--AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS   77 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hh--ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence            47999999999999999999999999999999865421  11  1224678899999999999998877 55544   47


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||..... .++.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.+++..|+++|++
T Consensus        78 ~~~~v~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  156 (243)
T PRK07023         78 RVLLINNAGTVEPI-GPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAA  156 (243)
T ss_pred             ceEEEEcCcccCCC-CccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHH
Confidence            99999999986532 56778899999999999999999999999999987778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHH-HHHHhcCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN-AVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~-~i~~l~s~  253 (280)
                      ++++++.++.+ .+.||+++.|+||+++|++............   .....+ ... .+.+++.+|+|+|+ .+.+|.++
T Consensus       157 ~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~---~~~~~~-~~~-~~~~~~~~~~~va~~~~~~l~~~  230 (243)
T PRK07023        157 LDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERF---PMRERF-REL-KASGALSTPEDAARRLIAYLLSD  230 (243)
T ss_pred             HHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccc---hHHHHH-HHh-hhcCCCCCHHHHHHHHHHHHhcc
Confidence            99999999999 7789999999999999998543211110000   001111 111 22378899999999 45677665


Q ss_pred             C
Q 023553          254 E  254 (280)
Q Consensus       254 ~  254 (280)
                      .
T Consensus       231 ~  231 (243)
T PRK07023        231 D  231 (243)
T ss_pred             c
Confidence            4

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=225.75  Aligned_cols=206  Identities=22%  Similarity=0.216  Sum_probs=174.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .++++||||++|||++++++|+++|++|++++|+.+.+++..+..   .++.++.||+++++++.++++++.   ..+|+
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~---~~~d~   74 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQS---ANIFTLAFDVTDHPGTKAALSQLP---FIPEL   74 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---CCCeEEEeeCCCHHHHHHHHHhcc---cCCCE
Confidence            378999999999999999999999999999999987766654432   356788999999999999888764   25899


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +|||||....  .+..+.+.++|++++++|+.+++++++.++|.|.+  .+++|++||..+..+.++...|+++|+++++
T Consensus        75 ~i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  150 (240)
T PRK06101         75 WIFNAGDCEY--MDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAY  150 (240)
T ss_pred             EEEcCccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHH
Confidence            9999997533  34456789999999999999999999999999843  4789999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      |++.++.|+..+||+++++.||+++|++.......                     .....+|+++++.++..+...
T Consensus       151 ~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~~---------------------~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        151 FARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTFA---------------------MPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCCC---------------------CCcccCHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999975432110                     023468999999999888654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=2.3e-32  Score=229.02  Aligned_cols=193  Identities=26%  Similarity=0.311  Sum_probs=174.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +..|++++||||+.|||++.|+.||++|.+|++++|++++++...+++...  ..+..+.+|.++.+++   .+.+.+..
T Consensus        46 ~~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~---ye~i~~~l  122 (312)
T KOG1014|consen   46 EKLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEV---YEKLLEKL  122 (312)
T ss_pred             HhcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchh---HHHHHHHh
Confidence            345699999999999999999999999999999999999999999998653  5688899999998873   33333333


Q ss_pred             --CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           93 --GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        93 --g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                        ..+-+||||+|...+.|.+|.+.+.+.+++.+++|+.+...+++.++|.|.+++.|-|++++|.+++.+.|.++.|++
T Consensus       123 ~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysa  202 (312)
T KOG1014|consen  123 AGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSA  202 (312)
T ss_pred             cCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHH
Confidence              267899999999986568899999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCC
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHL  210 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~  210 (280)
                      +|+.+..|+++|++||.++||.|-++.|+.|.|+|.....
T Consensus       203 sK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~  242 (312)
T KOG1014|consen  203 SKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK  242 (312)
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC
Confidence            9999999999999999999999999999999999976554

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.7e-32  Score=232.50  Aligned_cols=232  Identities=25%  Similarity=0.272  Sum_probs=188.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ..++.+++++|||+++|||+++|+.|+.+|++|++.+|+.+..++..+.+..   ...+.+++||+++.+++++++++.+
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            3568899999999999999999999999999999999999888888888764   3678889999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc--------
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--------  161 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~--------  161 (280)
                      +.++++|++|||||+..++  .  ..+.|.++.+|.+|+.|++.+++.++|.|+....+|||++||..+...        
T Consensus       110 ~~~~~ldvLInNAGV~~~~--~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~  185 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAPP--F--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSG  185 (314)
T ss_pred             hcCCCccEEEeCcccccCC--c--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccc
Confidence            9999999999999999763  2  677788999999999999999999999998777799999999876110        


Q ss_pred             -----CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceecc-ccccCCCcchhhhhhhhhhHHHHhhhccCCC
Q 023553          162 -----GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATG-LALAHLPEEERTEDAMVGFRNFVARNANMQG  235 (280)
Q Consensus       162 -----~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (280)
                           ......|+.||.+...+++.|++.+.. ||.+++++||.+.|. +.+ ....          ...+.+....  .
T Consensus       186 ~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~~~~----------~~~l~~~l~~--~  251 (314)
T KOG1208|consen  186 EKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-VNLL----------LRLLAKKLSW--P  251 (314)
T ss_pred             hhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec-chHH----------HHHHHHHHHH--H
Confidence                 112235999999999999999999988 999999999999999 555 2111          1111111111  1


Q ss_pred             CCCCHHHHHHHHHHhcCC-CCCceeecE
Q 023553          236 TELTANDVANAVLFLASD-EARYISGTN  262 (280)
Q Consensus       236 ~~~~~~dva~~i~~l~s~-~~~~~~G~~  262 (280)
                      -+-++++-|+..++++-. +-...+|..
T Consensus       252 ~~ks~~~ga~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  252 LTKSPEQGAATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             hccCHHHHhhheehhccCccccCccccc
Confidence            124789999999888853 333555555

>PRK08177 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-31  Score=218.75  Aligned_cols=183  Identities=22%  Similarity=0.264  Sum_probs=157.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      |+++||||++|||++++++|+++|++|++++|+.+..+...+ .   ..+.+..+|++|++++.++++.+.+  +++|++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~---~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~v   75 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L---PGVHIEKLDMNDPASLDQLLQRLQG--QRFDLL   75 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c---cccceEEcCCCCHHHHHHHHHHhhc--CCCCEE
Confidence            789999999999999999999999999999999876554322 2   3566788999999999999988754  489999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC---CCCccchhhHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG---LGPHAYTGSKHAV  175 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~al  175 (280)
                      |||||+......++.+.+.+++++.+++|+.+++.+.+.++|.|.+ ..++++++||..+..+.   .++..|+++|+++
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~  154 (225)
T PRK08177         76 FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAAL  154 (225)
T ss_pred             EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccccCCCCCccchHHHHHHH
Confidence            9999987543356778899999999999999999999999999854 34899999998776543   3567899999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceecccccc
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALA  208 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  208 (280)
                      +.|++.++.+++++||+|++|+||+++|++...
T Consensus       155 ~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~  187 (225)
T PRK08177        155 NSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD  187 (225)
T ss_pred             HHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC
Confidence            999999999999999999999999999998643

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.98  E-value=2.7e-31  Score=224.45  Aligned_cols=204  Identities=32%  Similarity=0.398  Sum_probs=166.5

Q ss_pred             HHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCC
Q 023553           34 TVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR  113 (280)
Q Consensus        34 ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  113 (280)
                      +|+.|+++|++|++++|+.+..+.          ..+++||+++.+++.++++++.   +++|++|||||+...      
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~----------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~------   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL----------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT------   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh----------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC------
Confidence            478999999999999998765321          2357899999999999888764   689999999997521      


Q ss_pred             CCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc---------------------------cCCCCc
Q 023553          114 EADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI---------------------------GGLGPH  166 (280)
Q Consensus       114 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~---------------------------~~~~~~  166 (280)
                          +++++++++|+.+++.+++.++|.|.+  .|+||++||.++..                           +.++..
T Consensus        62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (241)
T PRK12428         62 ----APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT  135 (241)
T ss_pred             ----CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence                247899999999999999999999853  48999999998863                           456778


Q ss_pred             cchhhHHHHHHHHHHHH-HHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVA-AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la-~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      .|++||+|++++++.++ .+++++||+||+|+||+++|++.........  .   .   .. .....+.+++.+|+|+|+
T Consensus       136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~--~---~---~~-~~~~~~~~~~~~pe~va~  206 (241)
T PRK12428        136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLG--Q---E---RV-DSDAKRMGRPATADEQAA  206 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhh--h---H---hh-hhcccccCCCCCHHHHHH
Confidence            99999999999999999 9999999999999999999998755322100  0   0   00 011223478899999999


Q ss_pred             HHHHhcCCCCCceeecEEEeCCCccc
Q 023553          246 AVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++++|+++...+++|+.+.+|||+..
T Consensus       207 ~~~~l~s~~~~~~~G~~i~vdgg~~~  232 (241)
T PRK12428        207 VLVFLCSDAARWINGVNLPVDGGLAA  232 (241)
T ss_pred             HHHHHcChhhcCccCcEEEecCchHH
Confidence            99999998888999999999999753

>PRK08264 short chain dehydrogenase; Validated

Probab=99.98  E-value=3.8e-30  Score=216.69  Aligned_cols=206  Identities=27%  Similarity=0.309  Sum_probs=176.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++|+++||||+++||+++|+.|+++|+ .|++++|+.+..++      ...++.++.+|+++.+++.++++.    +
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~----~   71 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------LGPRVVPLQLDVTDPASVAAAAEA----A   71 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------cCCceEEEEecCCCHHHHHHHHHh----c
Confidence            457899999999999999999999999999 99999998776543      234678889999999998776664    4


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++||++|..... .++.+.+.+++.+.+++|+.+++.+++++.|.+++.+.++++++||..+..+.++...|+.+|
T Consensus        72 ~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK  150 (238)
T PRK08264         72 SDVTILVNNAGIFRTG-SLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASK  150 (238)
T ss_pred             CCCCEEEECCCcCCCC-CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHH
Confidence            6899999999984332 678888999999999999999999999999999877789999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++++.+++.++.+++++|++++.+.||.++|++.....                        +...+++++++.++..+.
T Consensus       151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~------------------------~~~~~~~~~a~~~~~~~~  206 (238)
T PRK08264        151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD------------------------APKASPADVARQILDALE  206 (238)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC------------------------cCCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999854321                        124567777777776665


Q ss_pred             CC
Q 023553          253 DE  254 (280)
Q Consensus       253 ~~  254 (280)
                      ..
T Consensus       207 ~~  208 (238)
T PRK08264        207 AG  208 (238)
T ss_pred             CC
Confidence            43

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=5.3e-31  Score=210.02  Aligned_cols=162  Identities=35%  Similarity=0.564  Sum_probs=148.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC--cchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           19 RVALITGGATGIGESTVRLFHKHGA-KVCIADVQ--DNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~--~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      |+++||||++|||++++++|+++|+ .|++++|+  .+..++..+++. ...++.+++||++++++++++++++.+++++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7999999999999999999999966 67888888  566666666654 3367889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++++++|+.+++.+.+.++|    ++.|+||++||.++..+.+++..|+++|+|
T Consensus        81 ld~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaa  154 (167)
T PF00106_consen   81 LDILINNAGIFSD--GSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAA  154 (167)
T ss_dssp             ESEEEEECSCTTS--BSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHH
T ss_pred             ccccccccccccc--cccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHH
Confidence            9999999999875  8899999999999999999999999999999    447999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 023553          175 VLGLNKNVAAEL  186 (280)
Q Consensus       175 l~~~~~~la~e~  186 (280)
                      +++|+++++.|+
T Consensus       155 l~~~~~~la~e~  166 (167)
T PF00106_consen  155 LRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=1.2e-29  Score=215.97  Aligned_cols=222  Identities=22%  Similarity=0.204  Sum_probs=184.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CCccE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTLDI   97 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~   97 (280)
                      |+++||||+++||+++++.|+++|++|++++|+.+..+...+     ..+..+.||+++.+++..+++.+.+.. +++|.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~   77 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-----LGFTGILLDLDDPESVERAADEVIALTDNRLYG   77 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence            789999999999999999999999999999999877655432     135678899999999999999887754 68999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +||++|....  .++.+.+.+++++.+++|+.+++.+.+.+++.|++.+.++||++||..+..+.++...|+++|++++.
T Consensus        78 ii~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~  155 (256)
T PRK08017         78 LFNNAGFGVY--GPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEA  155 (256)
T ss_pred             EEECCCCCCc--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHH
Confidence            9999997654  66778899999999999999999999999999988778899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023553          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~  256 (280)
                      ++++++.++.++|++++.+.||.+.|++.............    ......     ...+.+|+|+++++..+++....
T Consensus       156 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~----~~~~~~-----~~~~~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        156 WSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPV----ENPGIA-----ARFTLGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             HHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccch----hhhHHH-----hhcCCCHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999876554322110000    000000     02358999999999999976554

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1e-29  Score=216.46  Aligned_cols=226  Identities=23%  Similarity=0.286  Sum_probs=178.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|++|||||++|||++++++|+++|++|++++|+.+..++..+.... ...+.++.+|+++++++.++++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            68999999999999999999999999999999987766655444332 2357788999999998766543      4899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||....  .++.+.+.+++++.+++|+.+++.+.+.+++.+.+.+.++||++||..+..+.++...|+++|++++
T Consensus        76 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~  153 (257)
T PRK09291         76 VLLNNAGIGEA--GAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALE  153 (257)
T ss_pred             EEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHH
Confidence            99999998765  7788899999999999999999999999999998777799999999999888888899999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      .+++.++.++.+.||++++|+||++.|++...................... ....+ ....+++++++.+..++..
T Consensus       154 ~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        154 AIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPE-DLAFP-LEQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhh-hhhcc-ccCCCHHHHHHHHHHHhcC
Confidence            999999999999999999999999999875432211000000000000100 11112 2447999999999887743

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.6e-31  Score=212.38  Aligned_cols=242  Identities=20%  Similarity=0.204  Sum_probs=190.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe--EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAK--VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ..+|++|+||+|+|||..++..+.+++-.  +++..|.....+.+.-..  .........|++...-+.++++..++..+
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~--gd~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAY--GDDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEe--cCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            46889999999999999988888887655  444444443322211111  13444556788888888888998888889


Q ss_pred             CccEEEECCCCCCCCCCC-CCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023553           94 TLDIMVNNAGISGAPCPD-IREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +.|++|||||...+-.+. ....+.++|++.|+.|+++.+.+.+.++|.++++. ++.+|++||.++..|.++|+.||.+
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~  161 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSS  161 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhh
Confidence            999999999998763222 23678899999999999999999999999998874 7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|.++|++.||.|-+ +++++.++.||.++|+|...........-+....++++...     +++.+|...|+.+.+|+
T Consensus       162 KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~-----~~ll~~~~~a~~l~~L~  235 (253)
T KOG1204|consen  162 KAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKES-----GQLLDPQVTAKVLAKLL  235 (253)
T ss_pred             HHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhc-----CCcCChhhHHHHHHHHH
Confidence            9999999999999976 79999999999999999876544331111112234444333     88999999999999999


Q ss_pred             CCCCCceeecEEEeC
Q 023553          252 SDEARYISGTNLMVD  266 (280)
Q Consensus       252 s~~~~~~~G~~i~~d  266 (280)
                      .... +++|+.+.+-
T Consensus       236 e~~~-f~sG~~vdy~  249 (253)
T KOG1204|consen  236 EKGD-FVSGQHVDYY  249 (253)
T ss_pred             HhcC-cccccccccc
Confidence            6544 8999988764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-29  Score=214.49  Aligned_cols=204  Identities=19%  Similarity=0.146  Sum_probs=156.0

Q ss_pred             CcccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHH
Q 023553            9 SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus         9 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .|+..+.+++|+++||||++|||+++++.|+++|++|++++|+.....+.  ... . ....+.+|+++.+++.+     
T Consensus         5 ~~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~--~~~-~-~~~~~~~D~~~~~~~~~-----   75 (245)
T PRK12367          5 DPMAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES--NDE-S-PNEWIKWECGKEESLDK-----   75 (245)
T ss_pred             chhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh--hcc-C-CCeEEEeeCCCHHHHHH-----
Confidence            34445678999999999999999999999999999999999986322111  111 1 12567899999987653     


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC---CCceEEEEccccccccCCCC
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ---TKGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~g~iv~isS~~~~~~~~~~  165 (280)
                        .++++|++|||||+..     ..+.+.++|++.+++|+.+++++++.++|.|+++   +.+.++..+|.++..+ +..
T Consensus        76 --~~~~iDilVnnAG~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~  147 (245)
T PRK12367         76 --QLASLDVLILNHGINP-----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALS  147 (245)
T ss_pred             --hcCCCCEEEECCccCC-----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCC
Confidence              4578999999999742     2346889999999999999999999999999653   2234545556655544 466


Q ss_pred             ccchhhHHHHHHHH---HHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHH
Q 023553          166 HAYTGSKHAVLGLN---KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       166 ~~Y~~sK~al~~~~---~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      ..|++||+|+..+.   +.++.|+...|++|+.++||+++|++..                           ....+|++
T Consensus       148 ~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~---------------------------~~~~~~~~  200 (245)
T PRK12367        148 PSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP---------------------------IGIMSADF  200 (245)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc---------------------------cCCCCHHH
Confidence            78999999986544   4555566788999999999999998621                           12468999


Q ss_pred             HHHHHHHhcCCCCC
Q 023553          243 VANAVLFLASDEAR  256 (280)
Q Consensus       243 va~~i~~l~s~~~~  256 (280)
                      +|+.++++++....
T Consensus       201 vA~~i~~~~~~~~~  214 (245)
T PRK12367        201 VAKQILDQANLGLY  214 (245)
T ss_pred             HHHHHHHHHhcCCc
Confidence            99999999976443

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=6.1e-30  Score=214.07  Aligned_cols=223  Identities=24%  Similarity=0.254  Sum_probs=196.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC---CCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE---PDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+.++|||+++|||+++|..+..+|++|.++.|+..++.++++++...   .++.+..+|+.|-+++...++++.+.++.
T Consensus        33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   33 RRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             cceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            379999999999999999999999999999999999999999888653   34778999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|.+|||||..-+  +.|.+.+.+.++..+++|+.++++.+++.++.|+++. .|+|+.+||..+..+..+++.|+++|+
T Consensus       113 ~d~l~~cAG~~v~--g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~  190 (331)
T KOG1210|consen  113 IDNLFCCAGVAVP--GLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKF  190 (331)
T ss_pred             cceEEEecCcccc--cccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHH
Confidence            9999999999877  9999999999999999999999999999999998776 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+.+|+..+++|+.++||+|..+.|+.+.||...+.....+          +..+-.... ....++|++|++++.=+..
T Consensus       191 alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP----------~~t~ii~g~-ss~~~~e~~a~~~~~~~~r  259 (331)
T KOG1210|consen  191 ALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKP----------EETKIIEGG-SSVIKCEEMAKAIVKGMKR  259 (331)
T ss_pred             HHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCc----------hheeeecCC-CCCcCHHHHHHHHHhHHhh
Confidence            99999999999999999999999999999997654322211          111112222 4568999999999776643

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.4e-29  Score=209.89  Aligned_cols=216  Identities=20%  Similarity=0.208  Sum_probs=179.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      |+++||||+++||++++++|+++|++|++++|+.+..++... .    .+.++.+|+++.+++.++++.+..  +++|++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-~----~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~v   74 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-L----GAEALALDVADPASVAGLAWKLDG--EALDAA   74 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-c----cceEEEecCCCHHHHHHHHHHhcC--CCCCEE
Confidence            689999999999999999999999999999999776654432 1    245789999999999988776632  479999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC---ccchhhHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP---HAYTGSKHAV  175 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~---~~Y~~sK~al  175 (280)
                      ||++|........+.+.+.++|++.+++|+.+++.++++++|.|.+ ..+++++++|..+..+....   ..|+++|+++
T Consensus        75 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~  153 (222)
T PRK06953         75 VYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGSIGDATGTTGWLYRASKAAL  153 (222)
T ss_pred             EECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCcccccccccCCCccccHHhHHHH
Confidence            9999987433245667899999999999999999999999998854 46899999998876664332   3699999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      +.+++.++.++.  ++++++|+||+++|++.+.                          +....+++.+..++.++....
T Consensus       154 ~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~  205 (222)
T PRK06953        154 NDALRAASLQAR--HATCIALHPGWVRTDMGGA--------------------------QAALDPAQSVAGMRRVIAQAT  205 (222)
T ss_pred             HHHHHHHhhhcc--CcEEEEECCCeeecCCCCC--------------------------CCCCCHHHHHHHHHHHHHhcC
Confidence            999999999864  6999999999999998543                          123477899999999877777


Q ss_pred             CceeecEEEeCCCcc
Q 023553          256 RYISGTNLMVDGGFT  270 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~  270 (280)
                      ...+|.++.+|++..
T Consensus       206 ~~~~~~~~~~~~~~~  220 (222)
T PRK06953        206 RRDNGRFFQYDGVEL  220 (222)
T ss_pred             cccCceEEeeCCcCC
Confidence            788999999998743

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.2e-27  Score=199.89  Aligned_cols=219  Identities=24%  Similarity=0.301  Sum_probs=178.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .|+++||||+++||+.+++.|+++ ++|++++|+.+..++..+..   ..+.++.+|+++++++.++++.    ++++|+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~----~~~id~   74 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL---PGATPFPVDLTDPEAIAAAVEQ----LGRLDV   74 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh---ccceEEecCCCCHHHHHHHHHh----cCCCCE
Confidence            579999999999999999999999 99999999977665554333   2467889999999998777664    358999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +||++|....  ..+.+.+.++|.+.+++|+.+++.+.+.+++.+++. .+++|++||..+..+.++...|+.+|++++.
T Consensus        75 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~  151 (227)
T PRK08219         75 LVHNAGVADL--GPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRA  151 (227)
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHH
Confidence            9999998654  567788999999999999999999999999988655 5899999999998888899999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCc
Q 023553          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~  257 (280)
                      +++.++.++... ++++++.||.++|++.........               ...+.+++++++|++++++++++...  
T Consensus       152 ~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~dva~~~~~~l~~~~--  213 (227)
T PRK08219        152 LADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQEG---------------GEYDPERYLRPETVAKAVRFAVDAPP--  213 (227)
T ss_pred             HHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhhc---------------cccCCCCCCCHHHHHHHHHHHHcCCC--
Confidence            999999998776 999999999998876443211100               00112578999999999999996533  


Q ss_pred             eeecEEEeC
Q 023553          258 ISGTNLMVD  266 (280)
Q Consensus       258 ~~G~~i~~d  266 (280)
                       .|.+.+++
T Consensus       214 -~~~~~~~~  221 (227)
T PRK08219        214 -DAHITEVV  221 (227)
T ss_pred             -CCccceEE
Confidence             34444443

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=4e-26  Score=204.32  Aligned_cols=197  Identities=19%  Similarity=0.172  Sum_probs=152.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+..  ...+..+.+|++|++++.+.       +++
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~--~~~v~~v~~Dvsd~~~v~~~-------l~~  245 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGE--DLPVKTLHWQVGQEAALAEL-------LEK  245 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc--CCCeEEEEeeCCCHHHHHHH-------hCC
Confidence            468999999999999999999999999999999999876654433221  23456788999999876543       358


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCC----ceEEEEccccccccCCCCccchh
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK----GTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +|++|||||+...     .+.+.+++++++++|+.+++.++++++|.|++++.    +.++++|+ ++. ..+....|++
T Consensus       246 IDiLInnAGi~~~-----~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~-~~~~~~~Y~A  318 (406)
T PRK07424        246 VDILIINHGINVH-----GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV-NPAFSPLYEL  318 (406)
T ss_pred             CCEEEECCCcCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc-cCCCchHHHH
Confidence            9999999997532     36788999999999999999999999999976542    34566554 333 3344568999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+.+|+. ++++.  .++.+..+.||+++|++..                           ....+||++|+.++++
T Consensus       319 SKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~---------------------------~~~~spe~vA~~il~~  368 (406)
T PRK07424        319 SKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP---------------------------IGVMSADWVAKQILKL  368 (406)
T ss_pred             HHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc---------------------------CCCCCHHHHHHHHHHH
Confidence            9999999985 44443  4577778889999887521                           1246899999999999


Q ss_pred             cCCCCCc
Q 023553          251 ASDEARY  257 (280)
Q Consensus       251 ~s~~~~~  257 (280)
                      ++.+.++
T Consensus       369 i~~~~~~  375 (406)
T PRK07424        369 AKRDFRN  375 (406)
T ss_pred             HHCCCCE
Confidence            9876653

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.94  E-value=8e-25  Score=228.80  Aligned_cols=181  Identities=20%  Similarity=0.216  Sum_probs=157.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcc------------------------------------------
Q 023553           17 VGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDN------------------------------------------   53 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~------------------------------------------   53 (280)
                      +++++|||||++|||.++|++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            6899999999999999999999998 799999999820                                          


Q ss_pred             -----hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhh
Q 023553           54 -----LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN  127 (280)
Q Consensus        54 -----~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n  127 (280)
                           ...+..+.+.. ...+.++.||++|.+++.++++++.++ ++||+||||||+...  ..+.+.+.++|++++++|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~--~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLAD--KHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCC--CCcccCCHHHHHHHHHHH
Confidence                 00011122221 346788999999999999999999877 689999999999866  789999999999999999


Q ss_pred             hhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceecccc
Q 023553          128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA  206 (280)
Q Consensus       128 ~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~  206 (280)
                      +.|.+++++++.+.+.    ++||++||..+..+.+++..|+++|++++++++.++.++..  ++|++|+||+++|+|.
T Consensus      2153 v~G~~~Ll~al~~~~~----~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~--irV~sI~wG~wdtgm~ 2225 (2582)
T TIGR02813      2153 VDGLLSLLAALNAENI----KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPS--AKVMSFNWGPWDGGMV 2225 (2582)
T ss_pred             HHHHHHHHHHHHHhCC----CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCC--cEEEEEECCeecCCcc
Confidence            9999999999887653    47999999999999999999999999999999999999754  9999999999999885

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=2.8e-23  Score=166.09  Aligned_cols=174  Identities=20%  Similarity=0.272  Sum_probs=146.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHH---HHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           19 RVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQV---CQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~---~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      |+++||||+++||+++++.|+++|+ .|++++|+.+..+..   .+.++ ...++.++.+|+++++++.++++.+...++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            6799999999999999999999997 578888876543321   12222 234677889999999999999999988889


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++||++|....  ..+.+.+.+++++.+++|+.+++.+.+.+.+    .+.+++++++|..+..+.++...|+++|+
T Consensus        81 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~~~~~~y~~sk~  154 (180)
T smart00822       81 PLRGVIHAAGVLDD--GLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGNPGQANYAAANA  154 (180)
T ss_pred             CeeEEEEccccCCc--cccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCCCCchhhHHHHH
Confidence            99999999998754  5677889999999999999999999998843    44589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCcee
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVA  202 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~  202 (280)
                      +++.+++.++    +.|+++.++.||+++
T Consensus       155 ~~~~~~~~~~----~~~~~~~~~~~g~~~  179 (180)
T smart00822      155 FLDALAAHRR----ARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHH----hcCCceEEEeecccc
Confidence            9999997754    357889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.91  E-value=7.9e-23  Score=180.04  Aligned_cols=217  Identities=19%  Similarity=0.168  Sum_probs=159.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++||+++||||+|+||+++++.|+++|  +.|++.+|+........+... ...+.++.+|++|.+++.++++       
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~l~~~~~-------   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP-APCLRFFIGDVRDKERLTRALR-------   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC-CCcEEEEEccCCCHHHHHHHHh-------
Confidence            468999999999999999999999986  789999888665444433332 2467889999999998876654       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++||+||....   +..+.+   ..+.+++|+.+++++++++.+.    +.++||++||.....|   ..+|++||+
T Consensus        74 ~iD~Vih~Ag~~~~---~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~----~~~~iV~~SS~~~~~p---~~~Y~~sK~  140 (324)
T TIGR03589        74 GVDYVVHAAALKQV---PAAEYN---PFECIRTNINGAQNVIDAAIDN----GVKRVVALSTDKAANP---INLYGATKL  140 (324)
T ss_pred             cCCEEEECcccCCC---chhhcC---HHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEeCCCCCCC---CCHHHHHHH
Confidence            69999999997532   222233   3468999999999999998863    3469999999765433   468999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh--------ccCCCCCCCHHHHHH
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN--------ANMQGTELTANDVAN  245 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~dva~  245 (280)
                      +.+.+++.++.+....|++++++.||++.++... ..+          .+.......        ....+.+++++|+++
T Consensus       141 ~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~i~----------~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~  209 (324)
T TIGR03589       141 ASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-VVP----------FFKSLKEEGVTELPITDPRMTRFWITLEQGVN  209 (324)
T ss_pred             HHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-cHH----------HHHHHHHhCCCCeeeCCCCceEeeEEHHHHHH
Confidence            9999999998888888999999999999987421 111          011111111        111245799999999


Q ss_pred             HHHHhcCCCCCceeecEEEeCCC
Q 023553          246 AVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      +++.++...   ..|+++ +..|
T Consensus       210 a~~~al~~~---~~~~~~-~~~~  228 (324)
T TIGR03589       210 FVLKSLERM---LGGEIF-VPKI  228 (324)
T ss_pred             HHHHHHhhC---CCCCEE-ccCC
Confidence            999998542   135555 4433

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.91  E-value=8.6e-23  Score=181.64  Aligned_cols=238  Identities=14%  Similarity=0.061  Sum_probs=166.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ++||++|||||+|+||+++++.|+++|++|++++|+.+........+....++.++.+|+++.+++.++++..     ++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   76 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KP   76 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CC
Confidence            4689999999999999999999999999999999887654433232322235677899999999988887753     69


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc------------cCC
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI------------GGL  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~------------~~~  163 (280)
                      |++||+|+....      ..+.+++...+++|+.+.+++++++.+.   ...+++|++||.....            +..
T Consensus        77 d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~  147 (349)
T TIGR02622        77 EIVFHLAAQPLV------RKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCYRNDEWVWGYRETDPLG  147 (349)
T ss_pred             CEEEECCccccc------ccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence            999999985421      3455667889999999999999987542   2246999999964321            123


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCC----CCeEEEEEeCCceeccccccC-CCcchhhhhhhhhhHHHHhhhccCCCCCC
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGK----YGIRVNCVSPYAVATGLALAH-LPEEERTEDAMVGFRNFVARNANMQGTEL  238 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~----~gi~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (280)
                      +..+|+.+|.+.+.+++.++.++..    .|++++.+.|+.+..+..... ............+ ...........+.++
T Consensus       148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g-~~~~~~~g~~~rd~i  226 (349)
T TIGR02622       148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSN-KIVIIRNPDATRPWQ  226 (349)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcC-CCeEECCCCccccee
Confidence            4578999999999999999988854    489999999999998753110 0000000000000 000001112236789


Q ss_pred             CHHHHHHHHHHhcCCC--CCceeecEEEeCCC
Q 023553          239 TANDVANAVLFLASDE--ARYISGTNLMVDGG  268 (280)
Q Consensus       239 ~~~dva~~i~~l~s~~--~~~~~G~~i~~dgG  268 (280)
                      ..+|++++++.++...  .....|+.+++.+|
T Consensus       227 ~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       227 HVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             eHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            9999999998877531  11123678998765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.91  E-value=1.1e-23  Score=170.80  Aligned_cols=194  Identities=21%  Similarity=0.286  Sum_probs=167.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-----eEEEEecCcchHHHHHHHhCC-----CCCeEEEecCCCCHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGA-----KVCIADVQDNLGQQVCQSLGG-----EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~-----~Vi~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .|+++|||+++|||.+||.+|.+...     ++++++|+.++.++.++.+..     ..++.++.+|+++..++.++..+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            68999999999999999999998754     378899999999998888742     25788899999999999999999


Q ss_pred             HHHHhCCccEEEECCCCCCCCCC-------------------------CCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhc
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCP-------------------------DIREADLSEFEKVFDINVKGVFHGMKHAARIM  142 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~-------------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  142 (280)
                      ++++|.++|.++.|||++..+.-                         .....+.|++..++++|++|++.+.+.+.|++
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            99999999999999999854200                         01134778899999999999999999999999


Q ss_pred             ccCCCceEEEEcccccccc---------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCC
Q 023553          143 IPQTKGTIISICSVAGAIG---------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP  211 (280)
Q Consensus       143 ~~~~~g~iv~isS~~~~~~---------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~  211 (280)
                      ..+.+..+|++||..+...         ..+..+|+.||.+.+-++-.+-+.+.+.|+...+++||..-|.+.....+
T Consensus       163 ~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~  240 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLN  240 (341)
T ss_pred             hcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhh
Confidence            8877889999999887553         34678999999999999999999999999999999999998888666544

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.90  E-value=6.2e-22  Score=174.37  Aligned_cols=224  Identities=15%  Similarity=0.142  Sum_probs=161.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC--C-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--G-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~--~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++|++|||||+|+||+++++.|+++|++|+++.|+.+..+.......  . ..++.++.+|+++.+++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            47999999999999999999999999999998888765443322221  1 2467888999999998877665       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC----------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----------  163 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~----------  163 (280)
                      ++|++||+||....      ..+.+++.+.+++|+.+.+++++++.+.+   +.++||++||.++..+..          
T Consensus        77 ~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~  147 (325)
T PLN02989         77 GCETVFHTASPVAI------TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVD  147 (325)
T ss_pred             CCCEEEEeCCCCCC------CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccC
Confidence            68999999996421      23445678999999999999999998864   246999999987643211          


Q ss_pred             ------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc
Q 023553          164 ------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA  231 (280)
Q Consensus       164 ------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (280)
                                  ....|+.||.+.+.+++.++++   +|+.+..+.|+.+.++........   ...   ..........
T Consensus       148 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~---~~~---~i~~~~~~~~  218 (325)
T PLN02989        148 ETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLNF---SVA---VIVELMKGKN  218 (325)
T ss_pred             cCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCCc---hHH---HHHHHHcCCC
Confidence                        0246999999999999988776   479999999999999875432110   000   0111111111


Q ss_pred             c---CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          232 N---MQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       232 ~---~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      +   ..+.+++++|+|++++.++....  . ++.++++|+
T Consensus       219 ~~~~~~r~~i~v~Dva~a~~~~l~~~~--~-~~~~ni~~~  255 (325)
T PLN02989        219 PFNTTHHRFVDVRDVALAHVKALETPS--A-NGRYIIDGP  255 (325)
T ss_pred             CCCCcCcCeeEHHHHHHHHHHHhcCcc--c-CceEEEecC
Confidence            1   12578899999999999886432  2 346788655

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.90  E-value=6.9e-22  Score=181.43  Aligned_cols=222  Identities=15%  Similarity=0.161  Sum_probs=162.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC----------CCCeEEEecCCCCHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----------EPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~   84 (280)
                      ...||+++||||+|+||++++++|++.|++|++++|+.+.++.+.+.+..          ..++.++.+|+++.+++.+ 
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~-  155 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP-  155 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH-
Confidence            35799999999999999999999999999999999998877665543321          1357889999999988754 


Q ss_pred             HHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCC
Q 023553           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGL  163 (280)
Q Consensus        85 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-~~~~  163 (280)
                            .++++|+|||++|....        ...++...+++|+.+..++++++.+    .+.++||++||..+. .+.+
T Consensus       156 ------aLggiDiVVn~AG~~~~--------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~g~p  217 (576)
T PLN03209        156 ------ALGNASVVICCIGASEK--------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNKVGFP  217 (576)
T ss_pred             ------HhcCCCEEEEccccccc--------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhcccCcc
Confidence                  34689999999987521        1224778899999999999988865    345799999998764 2222


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHH
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV  243 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  243 (280)
                      . ..|. +|+++..+.+.+..++...||+++.|+||++.|++.... ......        .. .. ..+.++.++.+||
T Consensus       218 ~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-~t~~v~--------~~-~~-d~~~gr~isreDV  284 (576)
T PLN03209        218 A-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-ETHNLT--------LS-EE-DTLFGGQVSNLQV  284 (576)
T ss_pred             c-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-ccccee--------ec-cc-cccCCCccCHHHH
Confidence            2 2344 788888889999999999999999999999998864321 000000        00 00 1223778899999


Q ss_pred             HHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          244 ANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       244 a~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      |++++++++... ...+.++.+-+|-
T Consensus       285 A~vVvfLasd~~-as~~kvvevi~~~  309 (576)
T PLN03209        285 AELMACMAKNRR-LSYCKVVEVIAET  309 (576)
T ss_pred             HHHHHHHHcCch-hccceEEEEEeCC
Confidence            999999997432 2345666665553

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.88  E-value=1.2e-21  Score=158.21  Aligned_cols=173  Identities=23%  Similarity=0.394  Sum_probs=134.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc---chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           20 VALITGGATGIGESTVRLFHKHGA-KVCIADVQD---NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~---~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++|||||.+|||..++++|+++|+ +|++++|+.   ...++..+++.. ..++.+++||++|++++.++++.+.+.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            789999999999999999999976 699999993   233344455443 468899999999999999999999999899


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      ||.+||.||....  ..+.+.+.++++.++..++.+..++.+.+.+    .+-.++|++||+++..+.+++..|+++.+.
T Consensus        82 i~gVih~ag~~~~--~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~YaaAN~~  155 (181)
T PF08659_consen   82 IDGVIHAAGVLAD--APIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSAYAAANAF  155 (181)
T ss_dssp             EEEEEE---------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHHHHHHHHH
T ss_pred             cceeeeeeeeecc--cccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHhHHHHHHH
Confidence            9999999999876  8899999999999999999999999888765    334699999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCcee
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVA  202 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~  202 (280)
                      ++.|++..+.    .|.++.+|..|..+
T Consensus       156 lda~a~~~~~----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  156 LDALARQRRS----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred             HHHHHHHHHh----CCCCEEEEEccccC
Confidence            9999987644    36778888877653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.87  E-value=9.6e-21  Score=157.62  Aligned_cols=235  Identities=18%  Similarity=0.085  Sum_probs=175.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecC-cchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           19 RVALITGGATGIGESTVRLFHKHGA--KVCIADVQ-DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      +++|||||+|.||.+.++++.++.-  +|+.++.- -....+....+....++.+++.||.|.+.+.+++++-     ++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----~~   75 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----QP   75 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----CC
Confidence            4789999999999999999999854  36766653 2333333344455678999999999999988777743     89


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-------------cC
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-------------GG  162 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-------------~~  162 (280)
                      |+++|-|+-++      -+.|.++....+++|+.|.+.+++++..+..+   -|+++||.....-             +.
T Consensus        76 D~VvhfAAESH------VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp~  146 (340)
T COG1088          76 DAVVHFAAESH------VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTPY  146 (340)
T ss_pred             CeEEEechhcc------ccccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCCC
Confidence            99999998554      46888889999999999999999999998633   5899999743321             23


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHH
Q 023553          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      .+.++|++|||+-+.|++++.+.   +|+.+....+.....|+.....-.+-.......+.+.-.....-..+.|..++|
T Consensus       147 ~PsSPYSASKAasD~lVray~~T---Yglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeD  223 (340)
T COG1088         147 NPSSPYSASKAASDLLVRAYVRT---YGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVED  223 (340)
T ss_pred             CCCCCcchhhhhHHHHHHHHHHH---cCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHh
Confidence            36789999999999999999888   588999999999999986544322222222222222222222223588999999


Q ss_pred             HHHHHHHhcCCCCCceeecEEEeCCCccccc
Q 023553          243 VANAVLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       243 va~~i~~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      -+.++..++....   .|++++++||....|
T Consensus       224 h~~ai~~Vl~kg~---~GE~YNIgg~~E~~N  251 (340)
T COG1088         224 HCRAIDLVLTKGK---IGETYNIGGGNERTN  251 (340)
T ss_pred             HHHHHHHHHhcCc---CCceEEeCCCccchH
Confidence            9999999996533   399999999987654

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.87  E-value=2.4e-20  Score=170.45  Aligned_cols=245  Identities=13%  Similarity=0.025  Sum_probs=164.2

Q ss_pred             CCcccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc---h----H---------HHHHHHh--CCCCCeE
Q 023553            8 DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN---L----G---------QQVCQSL--GGEPDTF   69 (280)
Q Consensus         8 ~~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~---~----~---------~~~~~~~--~~~~~~~   69 (280)
                      ..+..+..+++|++|||||+|+||+.++++|+++|++|+++++...   .    .         .+..+..  ....++.
T Consensus        37 ~~~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~  116 (442)
T PLN02572         37 SAPGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIE  116 (442)
T ss_pred             CCCCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcce
Confidence            3344567789999999999999999999999999999999864211   1    0         0000111  0113577


Q ss_pred             EEecCCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCce
Q 023553           70 FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGT  149 (280)
Q Consensus        70 ~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~  149 (280)
                      ++.+|++|.+++.++++..     ++|+|||+|+...   ......+++++...+++|+.+.+++++++...-   ...+
T Consensus       117 ~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~---~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g---v~~~  185 (442)
T PLN02572        117 LYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS---APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA---PDCH  185 (442)
T ss_pred             EEECCCCCHHHHHHHHHhC-----CCCEEEECCCccc---ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC---CCcc
Confidence            8999999999988877753     7999999997643   234445666788889999999999999987642   1248


Q ss_pred             EEEEcccccccc------------------------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccc
Q 023553          150 IISICSVAGAIG------------------------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL  205 (280)
Q Consensus       150 iv~isS~~~~~~------------------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  205 (280)
                      +|++||.+..-.                        ..+...|+.||.+.+.+++.++..   +|+.+..+.|+.+..+.
T Consensus       186 ~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~  262 (442)
T PLN02572        186 LVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVR  262 (442)
T ss_pred             EEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCC
Confidence            999998754311                        112358999999999999887766   58999999999999987


Q ss_pred             cccCCCc---------chhhhhhhhhh-HHHHhhhc-------cCCCCCCCHHHHHHHHHHhcCCCCCceee--cEEEeC
Q 023553          206 ALAHLPE---------EERTEDAMVGF-RNFVARNA-------NMQGTELTANDVANAVLFLASDEARYISG--TNLMVD  266 (280)
Q Consensus       206 ~~~~~~~---------~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~dva~~i~~l~s~~~~~~~G--~~i~~d  266 (280)
                      .......         ..........+ .....+..       ...+.++.++|++++++.++....  ..|  .++++.
T Consensus       263 ~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~~i~Nig  340 (442)
T PLN02572        263 TDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEFRVFNQF  340 (442)
T ss_pred             CcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCceeEEEeC
Confidence            4321000         00000000000 11111111       112488999999999999886421  234  467775


Q ss_pred             CC
Q 023553          267 GG  268 (280)
Q Consensus       267 gG  268 (280)
                      ++
T Consensus       341 s~  342 (442)
T PLN02572        341 TE  342 (442)
T ss_pred             CC
Confidence            43

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.87  E-value=2.6e-20  Score=163.94  Aligned_cols=225  Identities=17%  Similarity=0.147  Sum_probs=157.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC---CCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..||+++||||+|+||++++++|+++|++|+++.|+....+.......   ....+.++.+|+++.+++.++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            468999999999999999999999999999998888765443322221   12467888999999988776665      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-cC---------
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GG---------  162 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-~~---------  162 (280)
                       ++|++||+|+....   ..    .+...+.+++|+.+..++++++...   .+-.+||++||.++.. +.         
T Consensus        77 -~~d~vih~A~~~~~---~~----~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~  145 (322)
T PLN02986         77 -GCDAVFHTASPVFF---TV----KDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVV  145 (322)
T ss_pred             -CCCEEEEeCCCcCC---CC----CCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCc
Confidence             69999999986421   11    1223568899999999999987653   2236999999986531 11         


Q ss_pred             -------C-----CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh
Q 023553          163 -------L-----GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       163 -------~-----~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                             +     ....|++||.+.+.+++.+.++   +|+.+..+.|+.+.++..........   ..   ...+....
T Consensus       146 ~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~~~~---~~---~~~~~~g~  216 (322)
T PLN02986        146 DETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTLNFSV---EL---IVDFINGK  216 (322)
T ss_pred             CcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCCCccH---HH---HHHHHcCC
Confidence                   0     1356999999999999888776   37999999999999987543211000   00   11111111


Q ss_pred             c---cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          231 A---NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       231 ~---~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      .   .....+++++|+|++++.++....  ..| .++++|+.
T Consensus       217 ~~~~~~~~~~v~v~Dva~a~~~al~~~~--~~~-~yni~~~~  255 (322)
T PLN02986        217 NLFNNRFYRFVDVRDVALAHIKALETPS--ANG-RYIIDGPI  255 (322)
T ss_pred             CCCCCcCcceeEHHHHHHHHHHHhcCcc--cCC-cEEEecCC
Confidence            0   112468999999999999986432  234 67786553

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.86  E-value=3.4e-20  Score=165.28  Aligned_cols=227  Identities=15%  Similarity=0.101  Sum_probs=157.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEE-EEecCcch--HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVC-IADVQDNL--GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi-~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      |++|||||+|+||+++++.|.++|+.++ ++++....  .... ..+....++.++.+|++|.+++.++++.     .++
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~   75 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL-APVAQSERFAFEKVDICDRAELARVFTE-----HQP   75 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhh-hhcccCCceEEEECCCcChHHHHHHHhh-----cCC
Confidence            6899999999999999999999998855 44544321  1111 1111223567789999999998877764     279


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcc---c--CCCceEEEEccccccc----------
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI---P--QTKGTIISICSVAGAI----------  160 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~---~--~~~g~iv~isS~~~~~----------  160 (280)
                      |+|||+||....      ..+.++++..+++|+.++.++++++.+.|.   .  .+..++|++||.+...          
T Consensus        76 D~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  149 (355)
T PRK10217         76 DCVMHLAAESHV------DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT  149 (355)
T ss_pred             CEEEECCcccCc------chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC
Confidence            999999987532      234467889999999999999999987532   1  1235899999854321          


Q ss_pred             ---cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc------
Q 023553          161 ---GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA------  231 (280)
Q Consensus       161 ---~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  231 (280)
                         +..+...|+.||.+.+.+++.+++++   ++++..+.|+.+..+.....   . .....   +........      
T Consensus       150 E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~---~-~~~~~---~~~~~~~~~~~~~g~  219 (355)
T PRK10217        150 ETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPE---K-LIPLM---ILNALAGKPLPVYGN  219 (355)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcc---c-HHHHH---HHHHhcCCCceEeCC
Confidence               12346789999999999999998874   67888899999988764211   0 00000   011111110      


Q ss_pred             -cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          232 -NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 -~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                       .....++.++|+++++..++...   ..|+++++.+|..
T Consensus       220 g~~~~~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~  256 (355)
T PRK10217        220 GQQIRDWLYVEDHARALYCVATTG---KVGETYNIGGHNE  256 (355)
T ss_pred             CCeeeCcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCc
Confidence             11257899999999999988642   2578899988854

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.86  E-value=4.4e-20  Score=163.68  Aligned_cols=238  Identities=15%  Similarity=0.047  Sum_probs=153.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-----HHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-----GQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++++|++|||||+|+||+++++.|+++|++|++++|+...     ++....... ....+.++.+|++|.+++.++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            5789999999999999999999999999999999887542     222211111 1235788999999999988877754


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCC-ceEEEEcccccccc------
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIG------  161 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-g~iv~isS~~~~~~------  161 (280)
                           ++|+|||+|+....      ..+.++....+++|+.++.++++++.+...+++. -++|++||.+..-.      
T Consensus        83 -----~~d~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~  151 (340)
T PLN02653         83 -----KPDEVYNLAAQSHV------AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQS  151 (340)
T ss_pred             -----CCCEEEECCcccch------hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCC
Confidence                 69999999997532      1223455778899999999999999988654311 27888887533221      


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHCC---CCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHH-HHhhhccC
Q 023553          162 ----GLGPHAYTGSKHAVLGLNKNVAAELGK---YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRN-FVARNANM  233 (280)
Q Consensus       162 ----~~~~~~Y~~sK~al~~~~~~la~e~~~---~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  233 (280)
                          ..+...|+.||.+.+.+++.++.++.-   .++.++.+.|+...+.+. ....  ........+... ........
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~g~g~~  228 (340)
T PLN02653        152 ETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVT-RKIT--RAVGRIKVGLQKKLFLGNLDA  228 (340)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccch-hHHH--HHHHHHHcCCCCceEeCCCcc
Confidence                113568999999999999999888642   123334444543221100 0000  000000000000 00000111


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       234 ~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ...++..+|+|++++.++...    .+..+++.+|..
T Consensus       229 ~rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~  261 (340)
T PLN02653        229 SRDWGFAGDYVEAMWLMLQQE----KPDDYVVATEES  261 (340)
T ss_pred             eecceeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Confidence            257899999999999998643    145688877753

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.85  E-value=2.7e-19  Score=159.45  Aligned_cols=224  Identities=17%  Similarity=0.153  Sum_probs=154.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .+++++|||||+|+||+.++++|+++|++|++++|+.+..+.....+....++.++.+|+++.+++.++++       ++
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   80 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-------GC   80 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-------CC
Confidence            46789999999999999999999999999999999876655544444333467889999999988776654       68


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHH--HHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEF--EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------  162 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----------  162 (280)
                      |+|||+|+..... ......+++++  ...++.|+.+..++++++.+..   ..++||++||.+.....           
T Consensus        81 d~Vih~A~~~~~~-~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~~~  156 (353)
T PLN02896         81 DGVFHVAASMEFD-VSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAVVD  156 (353)
T ss_pred             CEEEECCccccCC-ccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCccC
Confidence            9999999976431 11122334433  4567788899999999987652   23689999997654210           


Q ss_pred             --------------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh-hhhhhhhhHHHH
Q 023553          163 --------------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER-TEDAMVGFRNFV  227 (280)
Q Consensus       163 --------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~  227 (280)
                                    +...+|+.||.+.+.+++.++++   +|+.+..+.|+.+..+......+.... ......+.....
T Consensus       157 E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~  233 (353)
T PLN02896        157 ETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLF  233 (353)
T ss_pred             cccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccc
Confidence                          11237999999999999988776   479999999999999875433221100 000000000000


Q ss_pred             ---hh--hccCCCCCCCHHHHHHHHHHhcCC
Q 023553          228 ---AR--NANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       228 ---~~--~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                         ..  .....+.++.++|+|++++.++..
T Consensus       234 ~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        234 SILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             ccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence               00  000013688999999999999853

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.85  E-value=2.7e-19  Score=158.54  Aligned_cols=217  Identities=18%  Similarity=0.183  Sum_probs=150.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHH--HHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC--QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++|+++||||+|+||+.+++.|+++|++|+++.|+........  ..+....++.++.+|+++.+++.++++       
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA-------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh-------
Confidence            35889999999999999999999999999998888765433222  122222357888999999988766554       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc------------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------------  161 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~------------  161 (280)
                      ++|++||+|+...     ..  ..+.+...+++|+.+..++++++.+.   .+.++||++||.+....            
T Consensus        80 ~~d~vih~A~~~~-----~~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E  149 (338)
T PLN00198         80 GCDLVFHVATPVN-----FA--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNE  149 (338)
T ss_pred             cCCEEEEeCCCCc-----cC--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceecc
Confidence            7899999998532     11  12334567899999999999998764   23469999999765431            


Q ss_pred             ------------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcch-hhhhhhhhhHHHHh
Q 023553          162 ------------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE-RTEDAMVGFRNFVA  228 (280)
Q Consensus       162 ------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~  228 (280)
                                  .++..+|+.||.+.+.+++.++++   +|+.+..+.|+.+..|......+... ........ ..+..
T Consensus       150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~-~~~~~  225 (338)
T PLN00198        150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITG-NEFLI  225 (338)
T ss_pred             ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcC-Ccccc
Confidence                        113457999999999999988776   57999999999999997533222110 00000000 00000


Q ss_pred             hh-cc-----CCCCCCCHHHHHHHHHHhcCC
Q 023553          229 RN-AN-----MQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       229 ~~-~~-----~~~~~~~~~dva~~i~~l~s~  253 (280)
                      .. ..     ....++.++|++++++.++..
T Consensus       226 ~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        226 NGLKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             ccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence            00 00     014789999999999999865

>PLN02650 dihydroflavonol-4-reductase

Probab=99.85  E-value=2.3e-19  Score=159.82  Aligned_cols=215  Identities=19%  Similarity=0.109  Sum_probs=151.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ..|++|||||+|.||+++++.|+++|++|++++|+.............   ..++.++.+|+++.+.+.++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            467999999999999999999999999999999887655443332211   1357788999999988776665       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC----C------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG----L------  163 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~----~------  163 (280)
                      .+|.+||+|+....     ..  .+.+...+++|+.+..++++++.+..   ...+||++||.....+.    +      
T Consensus        77 ~~d~ViH~A~~~~~-----~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~  146 (351)
T PLN02650         77 GCTGVFHVATPMDF-----ES--KDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDC  146 (351)
T ss_pred             CCCEEEEeCCCCCC-----CC--CCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCccc
Confidence            68999999986421     11  12346788999999999999987752   13589999997543210    0      


Q ss_pred             ------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh-hhhhhhHHHHhhh
Q 023553          164 ------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARN  230 (280)
Q Consensus       164 ------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~  230 (280)
                                  ...+|+.||.+.+.+++.++++   +|+++..+.|+.+.+|......+...... ......... ...
T Consensus       147 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~-~~~  222 (351)
T PLN02650        147 WSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAH-YSI  222 (351)
T ss_pred             CCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccc-cCc
Confidence                        1237999999999999998777   58999999999999997543222111000 000000000 000


Q ss_pred             ccCCCCCCCHHHHHHHHHHhcCC
Q 023553          231 ANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       231 ~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                       ...+.+++++|++++++.++..
T Consensus       223 -~~~r~~v~V~Dva~a~~~~l~~  244 (351)
T PLN02650        223 -IKQGQFVHLDDLCNAHIFLFEH  244 (351)
T ss_pred             -CCCcceeeHHHHHHHHHHHhcC
Confidence             1125899999999999999864

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.85  E-value=2.2e-19  Score=157.28  Aligned_cols=190  Identities=14%  Similarity=0.051  Sum_probs=140.5

Q ss_pred             cCCcEEEEEcCCChHHHH--HHHHHHHcCCeEEEEecCcchH------------HHHHHHhCC-CCCeEEEecCCCCHHH
Q 023553           16 LVGRVALITGGATGIGES--TVRLFHKHGAKVCIADVQDNLG------------QQVCQSLGG-EPDTFFCHCDVTKEED   80 (280)
Q Consensus        16 l~~k~vlItGas~giG~~--ia~~l~~~g~~Vi~~~r~~~~~------------~~~~~~~~~-~~~~~~~~~D~~~~~~   80 (280)
                      ..+|++||||+++|||.+  +|+.| +.|++|+++++..+..            +...+.+.. ...+..+.||++++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            357999999999999999  89999 9999998887543211            112222222 2356778999999999


Q ss_pred             HHHHHHHHHHHhCCccEEEECCCCCCCCCC---------------CCC-----------------CCCHHHHHHHhhhhh
Q 023553           81 VCSAVDLTVEKFGTLDIMVNNAGISGAPCP---------------DIR-----------------EADLSEFEKVFDINV  128 (280)
Q Consensus        81 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~---------------~~~-----------------~~~~~~~~~~~~~n~  128 (280)
                      +.++++.+.+.+|+||+||||+|......+               .+.                 ..+.++++.+  +++
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~T--v~v  195 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADT--VKV  195 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHH--HHh
Confidence            999999999999999999999997633110               011                 1233333333  445


Q ss_pred             hhH---HHH--HHHHHHhcccCCCceEEEEccccccccCCCC--ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCce
Q 023553          129 KGV---FHG--MKHAARIMIPQTKGTIISICSVAGAIGGLGP--HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAV  201 (280)
Q Consensus       129 ~~~---~~l--~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~--~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v  201 (280)
                      +|.   ...  .....+.|  ..+++++-+|........|.+  ..-+.+|++|++.++.|+.+|++.|||+|++.+|++
T Consensus       196 Mggedw~~Wi~al~~a~ll--a~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~  273 (398)
T PRK13656        196 MGGEDWELWIDALDEAGVL--AEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAV  273 (398)
T ss_pred             hccchHHHHHHHHHhcccc--cCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcc
Confidence            554   222  33444444  456899999988777766665  477999999999999999999999999999999999


Q ss_pred             eccccccCC
Q 023553          202 ATGLALAHL  210 (280)
Q Consensus       202 ~t~~~~~~~  210 (280)
                      .|.-.....
T Consensus       274 ~T~Ass~Ip  282 (398)
T PRK13656        274 VTQASSAIP  282 (398)
T ss_pred             cchhhhcCC
Confidence            999766553

>PRK06720 hypothetical protein; Provisional

Probab=99.84  E-value=1.3e-19  Score=144.35  Aligned_cols=144  Identities=24%  Similarity=0.422  Sum_probs=116.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+.+++|+++||||++|||+++|+.|+++|++|++++|+.+..++..+++.. .....++.+|+++.+++.++++++.+.
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999998776665555432 345677899999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-------CceEEEEccccccc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-------KGTIISICSVAGAI  160 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-------~g~iv~isS~~~~~  160 (280)
                      +|++|++|||||+.... .++.+.+.++ ++  .+|+.+.+..++.+.+.|.+++       .||+..||+.+..+
T Consensus        91 ~G~iDilVnnAG~~~~~-~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         91 FSRIDMLFQNAGLYKID-SIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             cCCCCEEEECCCcCCCC-CcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            99999999999987642 5555556555 44  6777777888888888876553       58888888876643

>PLN02583 cinnamoyl-CoA reductase

Probab=99.84  E-value=3.1e-19  Score=155.37  Aligned_cols=221  Identities=12%  Similarity=0.026  Sum_probs=153.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc--hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN--LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +-++|+++||||+|+||++++++|+++|++|+++.|+..  ...+....+.. ..++.++.+|+++.+++.+.+.     
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-----   77 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-----   77 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-----
Confidence            346789999999999999999999999999999998643  22222233321 2357788999999988765544     


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC---C-----
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG---L-----  163 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~---~-----  163 (280)
                        ..|.++|.++....       .. .++++.+++|+.+.+++++++.+.+   ..++||++||.++....   .     
T Consensus        78 --~~d~v~~~~~~~~~-------~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~  144 (297)
T PLN02583         78 --GCSGLFCCFDPPSD-------YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKD  144 (297)
T ss_pred             --CCCEEEEeCccCCc-------cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCC
Confidence              78999987653321       11 2467899999999999999998864   23699999998764311   0     


Q ss_pred             ----CC----------ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh
Q 023553          164 ----GP----------HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR  229 (280)
Q Consensus       164 ----~~----------~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (280)
                          .+          ..|+.||...+.++..++++   .|+.+++++|+.+.++......+.   ...    ....  .
T Consensus       145 ~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~---~~~----~~~~--~  212 (297)
T PLN02583        145 VDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPY---LKG----AAQM--Y  212 (297)
T ss_pred             CCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhh---hcC----Cccc--C
Confidence                01          15999999999999887665   489999999999999865322110   000    0000  0


Q ss_pred             hccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          230 NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       230 ~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ... ...+++++|+|++++.++...  ...| .+.+-++.
T Consensus       213 ~~~-~~~~v~V~Dva~a~~~al~~~--~~~~-r~~~~~~~  248 (297)
T PLN02583        213 ENG-VLVTVDVNFLVDAHIRAFEDV--SSYG-RYLCFNHI  248 (297)
T ss_pred             ccc-CcceEEHHHHHHHHHHHhcCc--ccCC-cEEEecCC
Confidence            001 135899999999999998632  2334 45555553

>PLN02214 cinnamoyl-CoA reductase

Probab=99.84  E-value=1.4e-18  Score=154.20  Aligned_cols=219  Identities=16%  Similarity=0.171  Sum_probs=155.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH-HHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ-VCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~-~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++|+++||||+|+||+++++.|+++|++|+++.|+.+.... ....+.. ...+.++.+|+++.+++.++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            578999999999999999999999999999999998654321 1122221 2357788999999998876665       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC----------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----------  163 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~----------  163 (280)
                      ++|+|||+|+...           +++.+.+++|+.+..++++++...    +-.+||++||..+..+.+          
T Consensus        81 ~~d~Vih~A~~~~-----------~~~~~~~~~nv~gt~~ll~aa~~~----~v~r~V~~SS~~avyg~~~~~~~~~~~E  145 (342)
T PLN02214         81 GCDGVFHTASPVT-----------DDPEQMVEPAVNGAKFVINAAAEA----KVKRVVITSSIGAVYMDPNRDPEAVVDE  145 (342)
T ss_pred             cCCEEEEecCCCC-----------CCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeccceeeeccCCCCCCcccCc
Confidence            6999999998531           135678999999999999998753    345899999976543210          


Q ss_pred             -----------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh--
Q 023553          164 -----------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN--  230 (280)
Q Consensus       164 -----------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--  230 (280)
                                 ....|+.||.+.+.+++.++++   +|+.+..+.|+.+..+.........  ..    .+..+..+.  
T Consensus       146 ~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~~--~~----~~~~~~~g~~~  216 (342)
T PLN02214        146 SCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINAS--LY----HVLKYLTGSAK  216 (342)
T ss_pred             ccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCch--HH----HHHHHHcCCcc
Confidence                       1247999999999999988776   4799999999999998643221100  00    000111111  


Q ss_pred             --ccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          231 --ANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       231 --~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                        ......+++++|+|++++.++...  . .|+.+++.++
T Consensus       217 ~~~~~~~~~i~V~Dva~a~~~al~~~--~-~~g~yn~~~~  253 (342)
T PLN02214        217 TYANLTQAYVDVRDVALAHVLVYEAP--S-ASGRYLLAES  253 (342)
T ss_pred             cCCCCCcCeeEHHHHHHHHHHHHhCc--c-cCCcEEEecC
Confidence              112357899999999999988543  1 2335566544

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.83  E-value=9.5e-19  Score=155.62  Aligned_cols=237  Identities=15%  Similarity=0.042  Sum_probs=159.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH----hCC--CCCeEEEecCCCCHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS----LGG--EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~----~~~--~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      ..+++|+++||||+|.||+.++++|.++|++|++++|...........    ...  ..++.++.+|+.+.+++..+++ 
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-   89 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-   89 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence            457889999999999999999999999999999999865432221111    111  1357788999999887766554 


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----  162 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----  162 (280)
                            ++|+|||.|+....+      .+.++....+++|+.+..++++++..    .+-.++|++||.+.....     
T Consensus        90 ------~~d~ViHlAa~~~~~------~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~~~~~~  153 (348)
T PRK15181         90 ------NVDYVLHQAALGSVP------RSLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDHPDLPK  153 (348)
T ss_pred             ------CCCEEEECccccCch------hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCCCCCCC
Confidence                  699999999875321      12233456799999999999988754    334589999987543211     


Q ss_pred             ------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCC----cchhhhhhhhhhHHHHhhhcc
Q 023553          163 ------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP----EEERTEDAMVGFRNFVARNAN  232 (280)
Q Consensus       163 ------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  232 (280)
                            .+...|+.+|.+.+.+++.++.+   +|+++..+.|+.+..+.......    ..........+..........
T Consensus       154 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~  230 (348)
T PRK15181        154 IEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGS  230 (348)
T ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCC
Confidence                  13458999999999999887666   47999999999999986432100    000000000000000000011


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 ~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ....++..+|++++++.++........|+++++.+|..
T Consensus       231 ~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~  268 (348)
T PRK15181        231 TSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDR  268 (348)
T ss_pred             ceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCc
Confidence            12577899999999988764322234688999987754

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.82  E-value=1.2e-18  Score=149.16  Aligned_cols=226  Identities=18%  Similarity=0.120  Sum_probs=167.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH--HHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ--VCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~--~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .+++|+||||+|.||..|++.|+++||+|.++.|+++..+.  ....+... .+...+..|++++++....++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            78999999999999999999999999999999999887544  24444433 468889999999999988877       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-CC--------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-LG--------  164 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-~~--------  164 (280)
                      ++|+|||.|.....     ...+  .-.+.++..+.|..++++++...   +.--|||++||.++.... +.        
T Consensus        78 gcdgVfH~Asp~~~-----~~~~--~e~~li~pav~Gt~nVL~ac~~~---~sVkrvV~TSS~aAv~~~~~~~~~~~vvd  147 (327)
T KOG1502|consen   78 GCDGVFHTASPVDF-----DLED--PEKELIDPAVKGTKNVLEACKKT---KSVKRVVYTSSTAAVRYNGPNIGENSVVD  147 (327)
T ss_pred             CCCEEEEeCccCCC-----CCCC--cHHhhhhHHHHHHHHHHHHHhcc---CCcceEEEeccHHHhccCCcCCCCCcccc
Confidence            89999999975432     1111  22378999999999999998775   224699999999998754 21        


Q ss_pred             ---C----------ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh--
Q 023553          165 ---P----------HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR--  229 (280)
Q Consensus       165 ---~----------~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--  229 (280)
                         |          ..|+.||..-+..+..++.+   .|+....|+|+.|..|...........      -...+.++  
T Consensus       148 E~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~------~~l~~i~G~~  218 (327)
T KOG1502|consen  148 EESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLN------ALLKLIKGLA  218 (327)
T ss_pred             cccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHH------HHHHHHhccc
Confidence               1          25889998877777777777   379999999999999987773332110      01112222  


Q ss_pred             --hccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          230 --NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       230 --~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                        ..+....+++.+|||++.+++....  ...|+++-.+....
T Consensus       219 ~~~~n~~~~~VdVrDVA~AHv~a~E~~--~a~GRyic~~~~~~  259 (327)
T KOG1502|consen  219 ETYPNFWLAFVDVRDVALAHVLALEKP--SAKGRYICVGEVVS  259 (327)
T ss_pred             ccCCCCceeeEeHHHHHHHHHHHHcCc--ccCceEEEecCccc
Confidence              1222235799999999999999643  34577777666554

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.82  E-value=3.5e-18  Score=150.17  Aligned_cols=211  Identities=20%  Similarity=0.199  Sum_probs=147.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh---CCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++|++|||||+|+||+.++++|+++|+.|+++.|+...........   ....++.++.+|+++++++.++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            5789999999999999999999999999999988765433221111   112467889999999988766655       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-cc-C---------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IG-G---------  162 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-~~-~---------  162 (280)
                      ++|++||+|+....   ..  .  +...+.+++|+.+..++++++....   +-.+||++||.++. .+ .         
T Consensus        76 ~~d~Vih~A~~~~~---~~--~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~~  145 (322)
T PLN02662         76 GCEGVFHTASPFYH---DV--T--DPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVVD  145 (322)
T ss_pred             CCCEEEEeCCcccC---CC--C--ChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcCC
Confidence            78999999986422   11  1  1125788999999999999987642   23589999997632 11 1         


Q ss_pred             ------CC-----CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh-
Q 023553          163 ------LG-----PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN-  230 (280)
Q Consensus       163 ------~~-----~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-  230 (280)
                            +.     ...|+.+|.+.+.+++.+.++   +|+++..+.|+.+.++.........  . .   ....+.... 
T Consensus       146 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~--~-~---~~~~~~~~~~  216 (322)
T PLN02662        146 ETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTS--A-E---AILNLINGAQ  216 (322)
T ss_pred             cccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCch--H-H---HHHHHhcCCc
Confidence                  00     147999999999998887665   4799999999999998643221100  0 0   011111110 


Q ss_pred             --ccCCCCCCCHHHHHHHHHHhcCC
Q 023553          231 --ANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       231 --~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                        ......++.++|+|++++.++..
T Consensus       217 ~~~~~~~~~i~v~Dva~a~~~~~~~  241 (322)
T PLN02662        217 TFPNASYRWVDVRDVANAHIQAFEI  241 (322)
T ss_pred             cCCCCCcCeEEHHHHHHHHHHHhcC
Confidence              11225789999999999998864

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.82  E-value=1.7e-18  Score=154.22  Aligned_cols=233  Identities=15%  Similarity=0.083  Sum_probs=153.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcc--hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           20 VALITGGATGIGESTVRLFHKHGAK-VCIADVQDN--LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++|||||+|+||+.++++|+++|+. |+.+++...  ..+.. ..+....++.++.+|++|.+++.++++.     .++|
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d   75 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL-ADVSDSERYVFEHADICDRAELDRIFAQ-----HQPD   75 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH-HhcccCCceEEEEecCCCHHHHHHHHHh-----cCCC
Confidence            6899999999999999999999976 555555321  12222 1222234567789999999998887764     2799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-----CCceEEEEcccccccc----------
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-----TKGTIISICSVAGAIG----------  161 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~g~iv~isS~~~~~~----------  161 (280)
                      ++||+|+....      ..+.++.++.+++|+.+..++++++.+.|...     +..++|++||.+....          
T Consensus        76 ~vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         76 AVMHLAAESHV------DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             EEEECCcccCC------cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence            99999986532      11223457789999999999999999876321     2348999999643221          


Q ss_pred             -----------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh
Q 023553          162 -----------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       162 -----------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                                 ..+...|+.||.+.+.+++.++.++   |+++..+.|+.+..+..........................
T Consensus       150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (352)
T PRK10084        150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK  226 (352)
T ss_pred             ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCC
Confidence                       1234689999999999999998774   56777788888887753211000000000000000000000


Q ss_pred             ccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          231 ANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       231 ~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ......+++++|+++++..++...   ..|+.+++.+|-.
T Consensus       227 g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~  263 (352)
T PRK10084        227 GDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNE  263 (352)
T ss_pred             CCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCc
Confidence            011246899999999999888642   2478888887753

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.81  E-value=1.6e-18  Score=151.64  Aligned_cols=224  Identities=19%  Similarity=0.135  Sum_probs=153.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcc-hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDN-LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +++||||+|+||++++++|++.|  ++|++++|... ...+..+.+.....+.++.+|+++++++.++++..     ++|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   75 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-----QPD   75 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-----CCC
Confidence            48999999999999999999987  67888876421 11111122222235778899999999988777642     699


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc------------CCC
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------------GLG  164 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~------------~~~  164 (280)
                      ++||+|+....      +.+.++++..+++|+.+...+++++...+.   +.+++++||......            ..+
T Consensus        76 ~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~  146 (317)
T TIGR01181        76 AVVHFAAESHV------DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTPLAP  146 (317)
T ss_pred             EEEEcccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence            99999987532      233455678899999999999998877542   258999998543221            113


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc-cC------CCCC
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-NM------QGTE  237 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~  237 (280)
                      ...|+.+|++.+.+++.++.+   .++++..+.|+.+..+...........       ......... +.      ...+
T Consensus       147 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~  216 (317)
T TIGR01181       147 SSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPYQFPEKLIPLM-------ITNALAGKPLPVYGDGQQVRDW  216 (317)
T ss_pred             CCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcccHHHHH-------HHHHhcCCCceEeCCCceEEee
Confidence            457999999999999998776   468999999999987753221000000       011111111 11      1357


Q ss_pred             CCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          238 LTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       238 ~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +.++|+++++..++.+.   ..|+++++.+|..
T Consensus       217 i~v~D~a~~~~~~~~~~---~~~~~~~~~~~~~  246 (317)
T TIGR01181       217 LYVEDHCRAIYLVLEKG---RVGETYNIGGGNE  246 (317)
T ss_pred             EEHHHHHHHHHHHHcCC---CCCceEEeCCCCc
Confidence            88999999999998542   3578888877643

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.81  E-value=5e-18  Score=150.69  Aligned_cols=233  Identities=12%  Similarity=0.067  Sum_probs=146.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-----HHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-----GQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |++|||||+|+||++++++|++.|++|++++|+.+.     ++...+....  ...+.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999987542     2211111111  235788999999999988777753   


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-----------
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------  160 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-----------  160 (280)
                        ++|++||+|+....  .    .+.+.-...+++|+.++.++++++.+.-.+ +..++|++||.+..-           
T Consensus        78 --~~d~ViH~Aa~~~~--~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~  148 (343)
T TIGR01472        78 --KPTEIYNLAAQSHV--K----VSFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETT  148 (343)
T ss_pred             --CCCEEEECCccccc--c----hhhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCC
Confidence              68999999997543  1    122233567789999999999999874211 124899999864322           


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccC-CCc--chhhhhhhhhhH-HHHhhhccCCCC
Q 023553          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAH-LPE--EERTEDAMVGFR-NFVARNANMQGT  236 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~-~~~--~~~~~~~~~~~~-~~~~~~~~~~~~  236 (280)
                      +..+..+|+.||.+.+.+++.++.++   |+.+....+..+..+..... ...  .........+.. ............
T Consensus       149 ~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd  225 (343)
T TIGR01472       149 PFYPRSPYAAAKLYAHWITVNYREAY---GLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRD  225 (343)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccC
Confidence            11245689999999999999998875   33322222222222211110 000  000000000000 000011112368


Q ss_pred             CCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          237 ELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       237 ~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++.++|++++++.++....    +..+++.+|..
T Consensus       226 ~i~V~D~a~a~~~~~~~~~----~~~yni~~g~~  255 (343)
T TIGR01472       226 WGHAKDYVEAMWLMLQQDK----PDDYVIATGET  255 (343)
T ss_pred             ceeHHHHHHHHHHHHhcCC----CccEEecCCCc
Confidence            8999999999998886432    34688877643

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02240 UDP-glucose 4-epimerase

Probab=99.81  E-value=7.5e-18  Score=149.94  Aligned_cols=239  Identities=17%  Similarity=0.166  Sum_probs=154.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH----HHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ----QVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~----~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+++|+++||||+|+||+++++.|+++|++|++++|......    ...+... ...++.++.+|+++++++.++++.. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            467899999999999999999999999999999987543221    1111111 1235778899999999988776642 


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc--------
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--------  161 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~--------  161 (280)
                          ++|++||+|+....  .    .+.+++.+.+++|+.++.++++++..    .+..++|++||......        
T Consensus        81 ----~~d~vih~a~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~E  146 (352)
T PLN02240         81 ----RFDAVIHFAGLKAV--G----ESVAKPLLYYDNNLVGTINLLEVMAK----HGCKKLVFSSSATVYGQPEEVPCTE  146 (352)
T ss_pred             ----CCCEEEEccccCCc--c----ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCC
Confidence                79999999997532  1    23356788999999999998886643    33468999999643211        


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcc--hhhhhhhhhhHHHHhhhc-----
Q 023553          162 ---GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE--ERTEDAMVGFRNFVARNA-----  231 (280)
Q Consensus       162 ---~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-----  231 (280)
                         ..+...|+.+|.+.+.+++.++.+.  .++.+..+.++.+..+.........  .........+........     
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (352)
T PLN02240        147 EFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTV  224 (352)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEE
Confidence               1235689999999999999887652  3567777777655543211100000  000000000111111000     


Q ss_pred             ----------cCCCCCCCHHHHHHHHHHhcCCC--CCceeecEEEeCCCcc
Q 023553          232 ----------NMQGTELTANDVANAVLFLASDE--ARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 ----------~~~~~~~~~~dva~~i~~l~s~~--~~~~~G~~i~~dgG~~  270 (280)
                                .....++.++|++++++.++...  .....|+++++.+|..
T Consensus       225 ~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~  275 (352)
T PLN02240        225 FGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKG  275 (352)
T ss_pred             eCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCc
Confidence                      01135788999999988877431  1234578899987754

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.80  E-value=3.1e-17  Score=125.03  Aligned_cols=216  Identities=17%  Similarity=0.180  Sum_probs=176.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i   95 (280)
                      -.+|+|.||-+.+|.+|++.|...++.|.-++-.+....         .....+..|-+-.|+-..+++++.+.+  .++
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A---------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekv   73 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA---------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKV   73 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc---------cceEEecCCcchhHHHHHHHHHHHHhhccccc
Confidence            468999999999999999999999999999887765321         123345566666777778888888766  389


Q ss_pred             cEEEECCCCCCCCCCCCCCCC-HHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           96 DIMVNNAGISGAPCPDIREAD-LSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      |.++|.||.+..  +....-+ .+..+.+|...+.....-.+....+++  .+|.+-+.+..++..+.|++..|+.+|+|
T Consensus        74 Dav~CVAGGWAG--GnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK--~GGLL~LtGAkaAl~gTPgMIGYGMAKaA  149 (236)
T KOG4022|consen   74 DAVFCVAGGWAG--GNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLK--PGGLLQLTGAKAALGGTPGMIGYGMAKAA  149 (236)
T ss_pred             ceEEEeeccccC--CCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccC--CCceeeecccccccCCCCcccchhHHHHH
Confidence            999999998865  2222122 345678888899988888888888874  46788888888999999999999999999


Q ss_pred             HHHHHHHHHHHHC--CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          175 VLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       175 l~~~~~~la~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++.++++|+.+-.  +.|--+..|.|-..+|||.|+.+|+.+.                   +.|...+.+++..+....
T Consensus       150 VHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADf-------------------ssWTPL~fi~e~flkWtt  210 (236)
T KOG4022|consen  150 VHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADF-------------------SSWTPLSFISEHFLKWTT  210 (236)
T ss_pred             HHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcc-------------------cCcccHHHHHHHHHHHhc
Confidence            9999999998864  4578899999999999999999998654                   678899999999999998


Q ss_pred             CCCCceeecEEEe
Q 023553          253 DEARYISGTNLMV  265 (280)
Q Consensus       253 ~~~~~~~G~~i~~  265 (280)
                      +..+.-+|+.+.+
T Consensus       211 ~~~RPssGsLlqi  223 (236)
T KOG4022|consen  211 ETSRPSSGSLLQI  223 (236)
T ss_pred             cCCCCCCCceEEE
Confidence            8888889988775

>PLN02686 cinnamoyl-CoA reductase

Probab=99.79  E-value=1.8e-17  Score=148.39  Aligned_cols=212  Identities=13%  Similarity=0.107  Sum_probs=146.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC------CCCCeEEEecCCCCHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG------GEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .+.++|++|||||+|+||+++++.|+++|+.|+++.|+.+..+.+.+...      ....+.++.+|+++.+++.++++ 
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH-
Confidence            45679999999999999999999999999999998887665444322111      01246788999999998877766 


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc-ccc----C
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIG----G  162 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~-~~~----~  162 (280)
                            ++|.+||.|+...+  .....    ......++|+.+..++++++...   .+-.++|++||..+ ..+    .
T Consensus       128 ------~~d~V~hlA~~~~~--~~~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~~  192 (367)
T PLN02686        128 ------GCAGVFHTSAFVDP--AGLSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYPH  192 (367)
T ss_pred             ------hccEEEecCeeecc--ccccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCCC
Confidence                  57899999987643  11110    11244577899999888887642   12358999999631 110    0


Q ss_pred             ------------------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhH
Q 023553          163 ------------------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR  224 (280)
Q Consensus       163 ------------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~  224 (280)
                                        .+...|+.||.+.+.+++.++.+   +|++++.+.|+.+.+|......+....         
T Consensus       193 ~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~~~---------  260 (367)
T PLN02686        193 DLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTATI---------  260 (367)
T ss_pred             CCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChhHH---------
Confidence                              02246999999999999988776   589999999999999964322111100         


Q ss_pred             HHHhhhccC----CCCCCCHHHHHHHHHHhcCC
Q 023553          225 NFVARNANM----QGTELTANDVANAVLFLASD  253 (280)
Q Consensus       225 ~~~~~~~~~----~~~~~~~~dva~~i~~l~s~  253 (280)
                      .+......+    ...+++++|++++++.++..
T Consensus       261 ~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~  293 (367)
T PLN02686        261 AYLKGAQEMLADGLLATADVERLAEAHVCVYEA  293 (367)
T ss_pred             HHhcCCCccCCCCCcCeEEHHHHHHHHHHHHhc
Confidence            011110011    12588999999999988853

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.78  E-value=9e-18  Score=151.47  Aligned_cols=235  Identities=18%  Similarity=0.138  Sum_probs=178.5

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHH
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~   85 (280)
                      ...+..+.||+++||||+|.||+++|+++++.+.+ +++.+|++.++-....++..   ..+..++.+|+.|.+.+.+++
T Consensus       242 ~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~  321 (588)
T COG1086         242 ELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAM  321 (588)
T ss_pred             HHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHH
Confidence            33445689999999999999999999999999865 88899998887777666654   368889999999999988877


Q ss_pred             HHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC
Q 023553           86 DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        86 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~  165 (280)
                      +..     ++|+++|+|+.-+.|   .-+   ....+.+++|+.|..++++++...    +-.++|.+|+.-+..|.   
T Consensus       322 ~~~-----kvd~VfHAAA~KHVP---l~E---~nP~Eai~tNV~GT~nv~~aa~~~----~V~~~V~iSTDKAV~Pt---  383 (588)
T COG1086         322 EGH-----KVDIVFHAAALKHVP---LVE---YNPEEAIKTNVLGTENVAEAAIKN----GVKKFVLISTDKAVNPT---  383 (588)
T ss_pred             hcC-----CCceEEEhhhhccCc---chh---cCHHHHHHHhhHhHHHHHHHHHHh----CCCEEEEEecCcccCCc---
Confidence            743     799999999986652   222   335788999999999999999874    34589999998887664   


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHH
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|++||...+.++++++......+-++.+|.=|+|-.....-..-...+.+   + -.+.....+.+.+.|++.+|.++
T Consensus       384 NvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~---~-GgplTvTdp~mtRyfMTI~EAv~  459 (588)
T COG1086         384 NVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIA---E-GGPLTVTDPDMTRFFMTIPEAVQ  459 (588)
T ss_pred             hHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHH---c-CCCccccCCCceeEEEEHHHHHH
Confidence            7999999999999999988877656889999999986665332211110000   0 11222223334577888999999


Q ss_pred             HHHHhcCCCCCceeecEEEeCCCc
Q 023553          246 AVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++++....   .-.|+++-+|=|-
T Consensus       460 LVlqA~a~---~~gGeifvldMGe  480 (588)
T COG1086         460 LVLQAGAI---AKGGEIFVLDMGE  480 (588)
T ss_pred             HHHHHHhh---cCCCcEEEEcCCC
Confidence            99888743   4578888888664

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.78  E-value=6.5e-17  Score=143.14  Aligned_cols=234  Identities=16%  Similarity=0.146  Sum_probs=150.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +++||||+|+||+.+++.|+++|++|++++|...........+.  ...++.++.+|+++.+++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            68999999999999999999999999998765332222111111  123466788999999988777653     37999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc------------CCCC
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------------GLGP  165 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~------------~~~~  165 (280)
                      +||+|+....  .    ...+.....+++|+.+..++++++..    .+.++||++||......            ..+.
T Consensus        77 vvh~a~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~  146 (338)
T PRK10675         77 VIHFAGLKAV--G----ESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_pred             EEECCccccc--c----chhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhhCCCCCCccccccCCCCCC
Confidence            9999987532  1    11233456789999999998887643    34568999999754311            0235


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcch-h-hhhhhhhhHHHHhhhc------------
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE-R-TEDAMVGFRNFVARNA------------  231 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~------------  231 (280)
                      ..|+.+|.+.+.+++.++++..  ++++..+.++.+..+.....+.... . ..........+.....            
T Consensus       147 ~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (338)
T PRK10675        147 SPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_pred             ChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCC
Confidence            7899999999999999876643  4677777776666543111111000 0 0000011111111100            


Q ss_pred             ---cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          232 ---NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 ---~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                         .....++.++|+|++++.++........|+++++.+|..
T Consensus       225 ~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~  266 (338)
T PRK10675        225 EDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVG  266 (338)
T ss_pred             CCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCc
Confidence               011368999999999988875321223468899887753

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.77  E-value=8.8e-17  Score=136.60  Aligned_cols=199  Identities=16%  Similarity=0.170  Sum_probs=132.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH-HHHHHHHHHHHHHh-C
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE-EDVCSAVDLTVEKF-G   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~-g   93 (280)
                      ..+++++||||+|+||+.+++.|++.|++|+++.|+.+.......   ....+.++.+|+++. +++       .+.+ .
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~l-------~~~~~~   84 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---QDPSLQIVRADVTEGSDKL-------VEAIGD   84 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---cCCceEEEEeeCCCCHHHH-------HHHhhc
Confidence            568999999999999999999999999999999998776443321   123577889999983 332       2223 3


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc---cCCCCccchh
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI---GGLGPHAYTG  170 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~---~~~~~~~Y~~  170 (280)
                      ++|++|+++|..... .+.         ..+++|+.+..++++++..    .+.++||++||.....   +.+....|..
T Consensus        85 ~~d~vi~~~g~~~~~-~~~---------~~~~~n~~~~~~ll~a~~~----~~~~~iV~iSS~~v~g~~~~~~~~~~~~~  150 (251)
T PLN00141         85 DSDAVICATGFRRSF-DPF---------APWKVDNFGTVNLVEACRK----AGVTRFILVSSILVNGAAMGQILNPAYIF  150 (251)
T ss_pred             CCCEEEECCCCCcCC-CCC---------CceeeehHHHHHHHHHHHH----cCCCEEEEEccccccCCCcccccCcchhH
Confidence            799999999864221 111         1246888888888888643    4557999999986432   2223345666


Q ss_pred             hHHHHHHH-HHHHHHH-HCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          171 SKHAVLGL-NKNVAAE-LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       171 sK~al~~~-~~~la~e-~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      .|.+...+ .+..+.+ +...|++++.|.||++.++..........               ...+...+++++|+|++++
T Consensus       151 ~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~---------------~~~~~~~~i~~~dvA~~~~  215 (251)
T PLN00141        151 LNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEP---------------EDTLYEGSISRDQVAEVAV  215 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECC---------------CCccccCcccHHHHHHHHH
Confidence            66544333 2333333 45678999999999998764322110000               0001134689999999999


Q ss_pred             HhcCC
Q 023553          249 FLASD  253 (280)
Q Consensus       249 ~l~s~  253 (280)
                      .++..
T Consensus       216 ~~~~~  220 (251)
T PLN00141        216 EALLC  220 (251)
T ss_pred             HHhcC
Confidence            99864

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.77  E-value=3.2e-17  Score=144.23  Aligned_cols=213  Identities=19%  Similarity=0.158  Sum_probs=151.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      ++++||||+|+||+.+++.|+++|++|++++|+.+.....    . ...+.++.+|+++.+++.++++       ++|++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~D~~~~~~l~~~~~-------~~d~v   68 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E-GLDVEIVEGDLRDPASLRKAVA-------GCRAL   68 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c-cCCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence            4799999999999999999999999999999987653221    1 1257788999999988776665       78999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC---------------
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL---------------  163 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~---------------  163 (280)
                      ||+|+....        ..+++...+++|+.+..++++++...    +.+++|++||.......+               
T Consensus        69 i~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~  136 (328)
T TIGR03466        69 FHVAADYRL--------WAPDPEEMYAANVEGTRNLLRAALEA----GVERVVYTSSVATLGVRGDGTPADETTPSSLDD  136 (328)
T ss_pred             EEeceeccc--------CCCCHHHHHHHHHHHHHHHHHHHHHh----CCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence            999975421        11235678899999999998887653    346999999976543211               


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc----CCCCCCC
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN----MQGTELT  239 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~  239 (280)
                      ....|+.+|.+.+.+++.++.+   .|+++..+.|+.+..+...........       ......+..+    .-..++.
T Consensus       137 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~  206 (328)
T TIGR03466       137 MIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRI-------IVDFLNGKMPAYVDTGLNLVH  206 (328)
T ss_pred             ccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHH-------HHHHHcCCCceeeCCCcceEE
Confidence            1347999999999999988765   478999999999987754322111100       0011111000    1135778


Q ss_pred             HHHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          240 ANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       240 ~~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      ++|+|++++.++...   ..|+.+.++|.
T Consensus       207 v~D~a~a~~~~~~~~---~~~~~~~~~~~  232 (328)
T TIGR03466       207 VDDVAEGHLLALERG---RIGERYILGGE  232 (328)
T ss_pred             HHHHHHHHHHHHhCC---CCCceEEecCC
Confidence            999999999888542   35777877543

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.76  E-value=3.1e-17  Score=141.26  Aligned_cols=228  Identities=18%  Similarity=0.189  Sum_probs=158.6

Q ss_pred             EEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           22 LITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        22 lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      |||||+|.||+.|+++|.++|  +.|.+++++......  ..........++.+|++|.+++.++++       +.|++|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~~~~~~~~~Di~d~~~l~~a~~-------g~d~V~   71 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKSGVKEYIQGDITDPESLEEALE-------GVDVVF   71 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhcccceeEEEeccccHHHHHHHhc-------CCceEE
Confidence            699999999999999999999  788888877654321  111112233388999999999888777       889999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc---CC-------------
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG---GL-------------  163 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~---~~-------------  163 (280)
                      |.|+....       ......++.+++|+.|+-++++++...    +-.++|++||.++..+   ..             
T Consensus        72 H~Aa~~~~-------~~~~~~~~~~~vNV~GT~nvl~aa~~~----~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~  140 (280)
T PF01073_consen   72 HTAAPVPP-------WGDYPPEEYYKVNVDGTRNVLEAARKA----GVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS  140 (280)
T ss_pred             EeCccccc-------cCcccHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence            99987543       113456889999999999999988753    4569999999987664   10             


Q ss_pred             -CCccchhhHHHHHHHHHHHHH-HHC-CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCH
Q 023553          164 -GPHAYTGSKHAVLGLNKNVAA-ELG-KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       164 -~~~~Y~~sK~al~~~~~~la~-e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                       ....|+.||+..|.++..... ++. ...++..+|.|..|..|......+.-.....  .+...+......-.-.++++
T Consensus       141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~vyV  218 (280)
T PF01073_consen  141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVR--SGLFLFQIGDGNNLFDFVYV  218 (280)
T ss_pred             cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHH--hcccceeecCCCceECcEeH
Confidence             234899999999999876544 111 1248999999999999976554432111000  00001111111112458889


Q ss_pred             HHHHHHHHHhcC---CC--CCceeecEEEeCCCccc
Q 023553          241 NDVANAVLFLAS---DE--ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       241 ~dva~~i~~l~s---~~--~~~~~G~~i~~dgG~~~  271 (280)
                      +++|++.+..+.   +.  ...+.|+.+.+..|-..
T Consensus       219 ~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~  254 (280)
T PF01073_consen  219 ENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPV  254 (280)
T ss_pred             HHHHHHHHHHHHHhccccccccCCCcEEEEECCCcc
Confidence            999999876543   22  35679999999887644

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.76  E-value=2.5e-17  Score=138.11  Aligned_cols=217  Identities=20%  Similarity=0.211  Sum_probs=158.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEEE
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  100 (280)
                      ||||||+|.||.++++.|.++|+.|+...|+...........    ++.++.+|+.+.+++.++++..     ++|.+||
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~   71 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIH   71 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT----TEEEEESETTSHHHHHHHHHHH-----TESEEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc----eEEEEEeecccccccccccccc-----CceEEEE
Confidence            799999999999999999999999988888776554433322    6788999999999998888865     8999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCccch
Q 023553          101 NAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPHAYT  169 (280)
Q Consensus       101 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~  169 (280)
                      .|+....      ..+.++....++.|+.+..++++++...    +..++|++||.......           .+...|+
T Consensus        72 ~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~  141 (236)
T PF01370_consen   72 LAAFSSN------PESFEDPEEIIEANVQGTRNLLEAAREA----GVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG  141 (236)
T ss_dssp             EBSSSSH------HHHHHSHHHHHHHHHHHHHHHHHHHHHH----TTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred             eeccccc------cccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccc
Confidence            9986421      1233567888889999999888888764    23699999996443322           1345799


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh-------ccCCCCCCCHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN-------ANMQGTELTAND  242 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d  242 (280)
                      .+|...+.+.+.+.++.   ++++..+.|+.+..+........ .....   .......+.       ......++..+|
T Consensus       142 ~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D  214 (236)
T PF01370_consen  142 ASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSS-SFLPS---LIRQALKGKPIKIPGDGSQVRDFIHVDD  214 (236)
T ss_dssp             HHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTS-SHHHH---HHHHHHTTSSEEEESTSSCEEEEEEHHH
T ss_pred             ccccccccccccccccc---ccccccccccccccccccccccc-cccch---hhHHhhcCCcccccCCCCCccceEEHHH
Confidence            99999999999998875   79999999999999981111110 00000   011111111       112356789999


Q ss_pred             HHHHHHHhcCCCCCceeecEEEe
Q 023553          243 VANAVLFLASDEARYISGTNLMV  265 (280)
Q Consensus       243 va~~i~~l~s~~~~~~~G~~i~~  265 (280)
                      +|++++.++....  ..|+.+++
T Consensus       215 ~a~~~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  215 LAEAIVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHHHHHSC--TTTEEEEE
T ss_pred             HHHHHHHHHhCCC--CCCCEEEe
Confidence            9999999997654  56777776

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.76  E-value=1.7e-16  Score=139.36  Aligned_cols=234  Identities=16%  Similarity=0.088  Sum_probs=153.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +++||||+|+||+.+++.|.++|++|++++|.................+..+.+|+++.+++.++++.     +++|++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-----HKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-----CCCcEEE
Confidence            47999999999999999999999999988764432222222221112566788999999998877663     4899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCccc
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  168 (280)
                      |+||....  .    .+.++..+.++.|+.+...+++++..    .+..++|++||.......           .+...|
T Consensus        76 ~~ag~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        76 HFAGLIAV--G----ESVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             ECccccCc--c----hhhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            99997643  1    12334567789999999998887654    334689999886543211           134689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh-hhhhhhhhHHHHh-hhc--------------c
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER-TEDAMVGFRNFVA-RNA--------------N  232 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~--------------~  232 (280)
                      +.+|++.+.+++.++++.  .++++..+.|+.+..+........... .......+..... +..              .
T Consensus       146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            999999999999987663  468899999988887743211110000 0000011111111 000              0


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 ~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ....++..+|++++++.++........|+++++.+|..
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~  261 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQG  261 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCc
Confidence            01357889999999998885422234567888866643

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.76  E-value=7.8e-17  Score=145.31  Aligned_cols=231  Identities=16%  Similarity=0.130  Sum_probs=151.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++.++||||||+|.||+.+++.|+++ |+.|++++|+.+....+.....  ...++.++.+|++|.+.+.++++      
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence            45568999999999999999999998 5999999987665443322110  11368889999999988766654      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC---------C
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG---------L  163 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~---------~  163 (280)
                       .+|+|||.|+....  ....    ++-.+.+..|+.+..++++++...    + .++|++||.......         +
T Consensus        86 -~~d~ViHlAa~~~~--~~~~----~~~~~~~~~n~~gt~~ll~aa~~~----~-~r~v~~SS~~vYg~~~~~~~~e~~p  153 (386)
T PLN02427         86 -MADLTINLAAICTP--ADYN----TRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKDHP  153 (386)
T ss_pred             -cCCEEEEcccccCh--hhhh----hChHHHHHHHHHHHHHHHHHHHhc----C-CEEEEEeeeeeeCCCcCCCCCcccc
Confidence             58999999987543  1111    112344567999999888877542    2 589999996532110         0


Q ss_pred             ------------------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCC---cchhh
Q 023553          164 ------------------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP---EEERT  216 (280)
Q Consensus       164 ------------------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~  216 (280)
                                              ....|+.||.+.+.+++.++..   +|+.+..+.|+.+..+.......   .....
T Consensus       154 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~  230 (386)
T PLN02427        154 LRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV  230 (386)
T ss_pred             cccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCcccccccccccc
Confidence                                    1236999999999999876544   57999999999999886421110   00000


Q ss_pred             hhhhhhh-HHHHhhhc-------cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          217 EDAMVGF-RNFVARNA-------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       217 ~~~~~~~-~~~~~~~~-------~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      ......+ .....+..       .....++.++|+|++++.++.... ...|+++++.+|
T Consensus       231 ~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~-~~~g~~yni~~~  289 (386)
T PLN02427        231 PRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA-RANGHIFNVGNP  289 (386)
T ss_pred             chHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc-cccCceEEeCCC
Confidence            0000001 11111111       112468999999999999885421 235788999875

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.75  E-value=5.1e-16  Score=138.35  Aligned_cols=228  Identities=15%  Similarity=0.065  Sum_probs=147.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchH------HHHHHHhCC-----C-CCeEEEecCCCCHHHH--HH
Q 023553           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLG------QQVCQSLGG-----E-PDTFFCHCDVTKEEDV--CS   83 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~------~~~~~~~~~-----~-~~~~~~~~D~~~~~~~--~~   83 (280)
                      +++||||+|+||+.+++.|+++|  ++|+++.|+.+..      ++..+....     . .++.++.+|++++..-  ..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999998  7799999876522      111111110     1 4688899999865310  00


Q ss_pred             HHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-
Q 023553           84 AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-  162 (280)
Q Consensus        84 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-  162 (280)
                      ..+.+   ...+|++||+|+.....         ..++..+++|+.+...+++.+...    +..+++++||....... 
T Consensus        81 ~~~~~---~~~~d~vih~a~~~~~~---------~~~~~~~~~nv~g~~~ll~~a~~~----~~~~~v~iSS~~v~~~~~  144 (367)
T TIGR01746        81 EWERL---AENVDTIVHNGALVNWV---------YPYSELRAANVLGTREVLRLAASG----RAKPLHYVSTISVLAAID  144 (367)
T ss_pred             HHHHH---HhhCCEEEeCCcEeccC---------CcHHHHhhhhhHHHHHHHHHHhhC----CCceEEEEccccccCCcC
Confidence            11111   24899999999875321         235677889999999888877653    23469999998765431 


Q ss_pred             ---------------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHH
Q 023553          163 ---------------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV  227 (280)
Q Consensus       163 ---------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (280)
                                     .....|+.+|.+.+.+++.++.    .|++++.+.||.+.++.....................  
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~--  218 (367)
T TIGR01746       145 LSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLA--  218 (367)
T ss_pred             CCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHH--
Confidence                           1134799999999999877543    3899999999999886322211111111000000000  


Q ss_pred             hhhccC----CCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          228 ARNANM----QGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       228 ~~~~~~----~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      .+..+.    ...+++++|++++++.++.......+|+++++.++.
T Consensus       219 ~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~  264 (367)
T TIGR01746       219 LGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPE  264 (367)
T ss_pred             hCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCC
Confidence            011111    134789999999999998654433458899998853

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.73  E-value=5.5e-16  Score=148.69  Aligned_cols=233  Identities=13%  Similarity=0.092  Sum_probs=155.8

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHH-HHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED-VCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~   89 (280)
                      .-+-.++++||||||+|.||+.++++|.++ |++|++++|........    .....+.++.+|+++..+ +++++    
T Consensus       309 ~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----~~~~~~~~~~gDl~d~~~~l~~~l----  380 (660)
T PRK08125        309 ACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----LGHPRFHFVEGDISIHSEWIEYHI----  380 (660)
T ss_pred             hhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----cCCCceEEEeccccCcHHHHHHHh----
Confidence            334468899999999999999999999986 79999999876543221    112357788999998654 23223    


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-------
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-------  162 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-------  162 (280)
                         .++|++||.|+....  ..    ..++....+++|+.+..++++++...    + .++|++||.+.....       
T Consensus       381 ---~~~D~ViHlAa~~~~--~~----~~~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~vyg~~~~~~~~E  446 (660)
T PRK08125        381 ---KKCDVVLPLVAIATP--IE----YTRNPLRVFELDFEENLKIIRYCVKY----N-KRIIFPSTSEVYGMCTDKYFDE  446 (660)
T ss_pred             ---cCCCEEEECccccCc--hh----hccCHHHHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchhhcCCCCCCCcCc
Confidence               279999999997643  11    11233567899999999999988753    2 589999996432210       


Q ss_pred             --------C---CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhh-HHHHhh-
Q 023553          163 --------L---GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVAR-  229 (280)
Q Consensus       163 --------~---~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~-  229 (280)
                              +   ....|+.||.+.+.+++.++++   +|+++..+.|+.+..+...............+..+ .....+ 
T Consensus       447 ~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~  523 (660)
T PRK08125        447 DTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS  523 (660)
T ss_pred             cccccccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCC
Confidence                    1   1236999999999999988766   47899999999999886432110000000000000 000001 


Q ss_pred             ------hccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          230 ------NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       230 ------~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                            .......++.++|++++++.++........|+++++.+|.
T Consensus       524 ~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        524 PIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             CeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence                  0111246899999999999988643223468889998873

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.73  E-value=9.3e-16  Score=136.38  Aligned_cols=225  Identities=14%  Similarity=0.113  Sum_probs=149.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCC-CHHHHHHHHHHHHHHhCCcc
Q 023553           19 RVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVT-KEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++++||||+|.||+.+++.|.+. |++|++++|+.+.....    .....+.++.+|++ +.+.+.++++       ++|
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~-------~~d   70 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDL----VNHPRMHFFEGDITINKEWIEYHVK-------KCD   70 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh----ccCCCeEEEeCCCCCCHHHHHHHHc-------CCC
Confidence            57999999999999999999986 69999999876533222    12235778899998 5655544333       799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC--------------
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--------------  162 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~--------------  162 (280)
                      +|||.|+...+  ..    ..++.+..+++|+.+..++++++..    .+ .++|++||.......              
T Consensus        71 ~ViH~aa~~~~--~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~  139 (347)
T PRK11908         71 VILPLVAIATP--AT----YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPLVY  139 (347)
T ss_pred             EEEECcccCCh--HH----hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCcccccccc
Confidence            99999987543  11    1223457789999999998888764    23 589999997443210              


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhh-hHHHHhhhc------
Q 023553          163 ----LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG-FRNFVARNA------  231 (280)
Q Consensus       163 ----~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------  231 (280)
                          .+...|+.+|.+.+.+.+.++.+   +|+.+..+.|+.+..+.................. +..+..+..      
T Consensus       140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  216 (347)
T PRK11908        140 GPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDG  216 (347)
T ss_pred             CcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecC
Confidence                01236999999999999988765   4788888999999887643211100000000000 111111110      


Q ss_pred             -cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          232 -NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       232 -~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                       ...+.++..+|++++++.++........|+.+++.++
T Consensus       217 g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        217 GSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             CceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence             1124689999999999999865332245889999875

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.71  E-value=1.1e-15  Score=146.98  Aligned_cols=225  Identities=15%  Similarity=0.089  Sum_probs=153.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCc--chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKH--GAKVCIADVQD--NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~--g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++|+||||||+|.||+.+++.|.++  +++|+++++..  ........ ......+.++.+|+++.+.+.+++..    
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~----   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP-SKSSPNFKFVKGDIASADLVNYLLIT----   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh-cccCCCeEEEECCCCChHHHHHHHhh----
Confidence            45789999999999999999999998  68899888753  22222111 11124678899999999876655432    


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc----------
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------  161 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~----------  161 (280)
                       .++|+|||+|+....      +.+.++....+++|+.+...+++++...   ....++|++||......          
T Consensus        79 -~~~D~ViHlAa~~~~------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~vyg~~~~~~~~~~~  148 (668)
T PLN02260         79 -EGIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDADVGNH  148 (668)
T ss_pred             -cCCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchHHhCCCccccccCcc
Confidence             389999999997543      1222334567899999999988887542   12368999999654221          


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc------
Q 023553          162 ----GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA------  231 (280)
Q Consensus       162 ----~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  231 (280)
                          ..+...|+.+|.+.+.+++.+..+   +++.+..+.|+.+..+.......        ...+.....+..      
T Consensus       149 E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~--------i~~~~~~a~~g~~i~i~g  217 (668)
T PLN02260        149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKL--------IPKFILLAMQGKPLPIHG  217 (668)
T ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccH--------HHHHHHHHhCCCCeEEec
Confidence                113468999999999999988766   47889999999998875321100        001111111100      


Q ss_pred             --cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          232 --NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       232 --~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                        .....++..+|+|+++..++...   ..|+++++.++.
T Consensus       218 ~g~~~r~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~  254 (668)
T PLN02260        218 DGSNVRSYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKK  254 (668)
T ss_pred             CCCceEeeEEHHHHHHHHHHHHhcC---CCCCEEEECCCC
Confidence              01135789999999999888542   246788887764

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.69  E-value=4.3e-17  Score=138.38  Aligned_cols=218  Identities=18%  Similarity=0.163  Sum_probs=147.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhC---CCCCe----EEEecCCCCHHHHHHHHHHHHHHh
Q 023553           21 ALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLG---GEPDT----FFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~---~~~~~----~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ||||||+|.||+++|++|++.+. .++++++++..+-....++.   ...++    ..+.+|++|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            79999999999999999999985 69999999998888877773   22223    34589999999988777643    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                       ++|++||.|+.-+.   ++.+   +...+.+++|+.|+.++++++..+    +-.++|+||+.-+..|   ...|++||
T Consensus        77 -~pdiVfHaAA~KhV---pl~E---~~p~eav~tNv~GT~nv~~aa~~~----~v~~~v~ISTDKAv~P---tnvmGatK  142 (293)
T PF02719_consen   77 -KPDIVFHAAALKHV---PLME---DNPFEAVKTNVLGTQNVAEAAIEH----GVERFVFISTDKAVNP---TNVMGATK  142 (293)
T ss_dssp             -T-SEEEE------H---HHHC---CCHHHHHHHHCHHHHHHHHHHHHT----T-SEEEEEEECGCSS-----SHHHHHH
T ss_pred             -CCCEEEEChhcCCC---ChHH---hCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEccccccCCC---CcHHHHHH
Confidence             99999999997553   1222   245788999999999999999874    3469999999888755   48999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc-------CCCCCCCHHHHHH
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-------MQGTELTANDVAN  245 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~  245 (280)
                      ...+.++.+.+......+.++.+|.=|.|-.....-           ++-|....++..+       +.+.+++++|.++
T Consensus       143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSV-----------ip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~  211 (293)
T PF02719_consen  143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSV-----------IPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQ  211 (293)
T ss_dssp             HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSC-----------HHHHHHHHHTTSSEEECETT-EEEEE-HHHHHH
T ss_pred             HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcH-----------HHHHHHHHHcCCcceeCCCCcEEEEecHHHHHH
Confidence            999999999888876667899999999885543211           1112222222211       2367889999999


Q ss_pred             HHHHhcCCCCCceeecEEEeCCCcc
Q 023553          246 AVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++..+...   ..|+++-.|=|..
T Consensus       212 Lvl~a~~~~---~~geifvl~mg~~  233 (293)
T PF02719_consen  212 LVLQAAALA---KGGEIFVLDMGEP  233 (293)
T ss_dssp             HHHHHHHH-----TTEEEEE---TC
T ss_pred             HHHHHHhhC---CCCcEEEecCCCC
Confidence            998887432   3578887776544

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.69  E-value=1.7e-15  Score=135.80  Aligned_cols=221  Identities=15%  Similarity=0.072  Sum_probs=147.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++|+++||||+|.||+++++.|.++|+.|++++|.......   .  ......++.+|+++.+.+..+++       ++|
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~---~--~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   87 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS---E--DMFCHEFHLVDLRVMENCLKVTK-------GVD   87 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc---c--ccccceEEECCCCCHHHHHHHHh-------CCC
Confidence            68999999999999999999999999999999986432110   0  01124567899999887655543       789


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc----------------
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI----------------  160 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~----------------  160 (280)
                      +|||.|+....  ..+..   .+....+..|+.+..++++++..    .+-.++|++||.....                
T Consensus        88 ~Vih~Aa~~~~--~~~~~---~~~~~~~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~  158 (370)
T PLN02695         88 HVFNLAADMGG--MGFIQ---SNHSVIMYNNTMISFNMLEAARI----NGVKRFFYASSACIYPEFKQLETNVSLKESDA  158 (370)
T ss_pred             EEEEcccccCC--ccccc---cCchhhHHHHHHHHHHHHHHHHH----hCCCEEEEeCchhhcCCccccCcCCCcCcccC
Confidence            99999986532  11111   12244567899999998888754    3345899999964321                


Q ss_pred             -cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhh-HHHHhh--h------
Q 023553          161 -GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVAR--N------  230 (280)
Q Consensus       161 -~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~--~------  230 (280)
                       +..+...|+.+|.+.+.+++.++..   .|+++..+.|+.+..+............    ..+ ......  .      
T Consensus       159 ~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~g~  231 (370)
T PLN02695        159 WPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAP----AAFCRKALTSTDEFEMWGD  231 (370)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccH----HHHHHHHHcCCCCeEEeCC
Confidence             1224568999999999999987665   4799999999999988532110000000    001 011110  0      


Q ss_pred             ccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          231 ANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       231 ~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ......++..+|++++++.++...    .++.+++.+|.
T Consensus       232 g~~~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~  266 (370)
T PLN02695        232 GKQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE  266 (370)
T ss_pred             CCeEEeEEeHHHHHHHHHHHHhcc----CCCceEecCCC
Confidence            011246789999999999987542    25677887664

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.69  E-value=1.7e-15  Score=132.39  Aligned_cols=217  Identities=15%  Similarity=0.108  Sum_probs=141.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH--HhCCccEE
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE--KFGTLDIM   98 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~id~l   98 (280)
                      ++||||+|.||+.++++|+++|+.++++.|+........         ....+|+.|..+...+++.+.+  .++++|+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~V   72 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV---------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEAI   72 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH---------hhhhhhhhhhhhHHHHHHHHhcccccCCccEE
Confidence            799999999999999999999997766655543221110         1234577766555555555432  23589999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCcc
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHA  167 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-----------~~~~~~  167 (280)
                      ||+|+....  .   ..+.   ...++.|+.+..++++++..    .+ .++|++||.+....           ..+...
T Consensus        73 ih~A~~~~~--~---~~~~---~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~  139 (308)
T PRK11150         73 FHEGACSST--T---EWDG---KYMMDNNYQYSKELLHYCLE----RE-IPFLYASSAATYGGRTDDFIEEREYEKPLNV  139 (308)
T ss_pred             EECceecCC--c---CCCh---HHHHHHHHHHHHHHHHHHHH----cC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCH
Confidence            999986532  1   1122   34689999999999888764    22 37999999754321           123467


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhh-HHHHhhh--------ccCCCCCC
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVARN--------ANMQGTEL  238 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~~~~~~~  238 (280)
                      |+.+|.+.+.+++.++.+   .++.+..+.|+.+..+............    ..+ .......        ......++
T Consensus       140 Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~g~~~~~r~~i  212 (308)
T PRK11150        140 YGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVA----FHLNNQLNNGENPKLFEGSENFKRDFV  212 (308)
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhH----HHHHHHHhcCCCCEEecCCCceeeeee
Confidence            999999999998887655   4789999999999887643211000000    000 0111110        01124678


Q ss_pred             CHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          239 TANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       239 ~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .++|++++++.++...    .|+++++.+|..
T Consensus       213 ~v~D~a~a~~~~~~~~----~~~~yni~~~~~  240 (308)
T PRK11150        213 YVGDVAAVNLWFWENG----VSGIFNCGTGRA  240 (308)
T ss_pred             eHHHHHHHHHHHHhcC----CCCeEEcCCCCc
Confidence            9999999999888643    245888877753

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.68  E-value=2.2e-15  Score=137.58  Aligned_cols=219  Identities=13%  Similarity=0.031  Sum_probs=144.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      -++++||||||+|.||+.++++|.++|++|+++++......+.....-...++.++..|+.+..     +       .++
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l-------~~~  184 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----L-------LEV  184 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----h-------cCC
Confidence            4778999999999999999999999999999988753322211111111235677888987652     1       268


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc--------------
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--------------  161 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~--------------  161 (280)
                      |+|||.|+....  ..    ..++....+++|+.+..++++++...    + .++|++||......              
T Consensus       185 D~ViHlAa~~~~--~~----~~~~p~~~~~~Nv~gt~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~  253 (442)
T PLN02206        185 DQIYHLACPASP--VH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQVETYWGNV  253 (442)
T ss_pred             CEEEEeeeecch--hh----hhcCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECChHHhCCCCCCCCCccccccC
Confidence            999999987543  11    11234678899999999999988653    2 38999999764321              


Q ss_pred             --CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc-------
Q 023553          162 --GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-------  232 (280)
Q Consensus       162 --~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  232 (280)
                        ......|+.+|.+.+.+++.+.++   +++.+..+.|+.+..+.......  .....   -......+...       
T Consensus       254 ~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~--~~v~~---~i~~~l~~~~i~i~g~G~  325 (442)
T PLN02206        254 NPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDG--RVVSN---FVAQALRKEPLTVYGDGK  325 (442)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcccc--chHHH---HHHHHHcCCCcEEeCCCC
Confidence              112357999999999999887665   46888899998888765321100  00000   00111111111       


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       233 ~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ....++.++|++++++.++...    .+..+++.+|.
T Consensus       326 ~~rdfi~V~Dva~ai~~a~e~~----~~g~yNIgs~~  358 (442)
T PLN02206        326 QTRSFQFVSDLVEGLMRLMEGE----HVGPFNLGNPG  358 (442)
T ss_pred             EEEeEEeHHHHHHHHHHHHhcC----CCceEEEcCCC
Confidence            1135789999999999988532    23478887764

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.67  E-value=4e-15  Score=130.04  Aligned_cols=217  Identities=22%  Similarity=0.205  Sum_probs=151.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc-cEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL-DIM   98 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i-d~l   98 (280)
                      .+|||||+|.||+.++++|.++|+.|+.++|.........      ..+.++.+|+++.+...+.++       .. |++
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~-------~~~d~v   68 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDELAK-------GVPDAV   68 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------cccceeeecccchHHHHHHHh-------cCCCEE
Confidence            3999999999999999999999999999999877544332      345678889999855544444       33 999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------C--CC
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------L--GP  165 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----------~--~~  165 (280)
                      ||+|+....+   ....+  +....+.+|+.+..++++++..    .+..++|+.||.+...+.           +  +.
T Consensus        69 ih~aa~~~~~---~~~~~--~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~  139 (314)
T COG0451          69 IHLAAQSSVP---DSNAS--DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPL  139 (314)
T ss_pred             EEccccCchh---hhhhh--CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCCC
Confidence            9999987542   11111  4567899999999999999877    345689997765544322           1  11


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc-cCC-------CCC
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-NMQ-------GTE  237 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~  237 (280)
                      ..|+.+|.+.+.++.....   ..|+.+..+.|+.+..+......+......    .......... ...       ..+
T Consensus       140 ~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  212 (314)
T COG0451         140 NPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSA----FIRQLLKGEPIIVIGGDGSQTRDF  212 (314)
T ss_pred             CHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHH----HHHHHHhCCCcceEeCCCceeEee
Confidence            2599999999999999888   467999999999998887665522211100    0000111111 111       247


Q ss_pred             CCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          238 LTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       238 ~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      +..+|+++++..++......    .+++.++.
T Consensus       213 i~v~D~a~~~~~~~~~~~~~----~~ni~~~~  240 (314)
T COG0451         213 VYVDDVADALLLALENPDGG----VFNIGSGT  240 (314)
T ss_pred             EeHHHHHHHHHHHHhCCCCc----EEEeCCCC
Confidence            88999999999999754332    77777764

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.66  E-value=2.3e-14  Score=120.30  Aligned_cols=156  Identities=22%  Similarity=0.220  Sum_probs=123.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      +++|||||+|-||+..|..|++.|+.|++++.-.....+......    ..++..|+.|.+.+.+++++-     +||.+
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~----~~f~~gDi~D~~~L~~vf~~~-----~idaV   71 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ----FKFYEGDLLDRALLTAVFEEN-----KIDAV   71 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc----CceEEeccccHHHHHHHHHhc-----CCCEE
Confidence            479999999999999999999999999999987766555444322    568899999999988888754     99999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC------------CCc
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL------------GPH  166 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~------------~~~  166 (280)
                      ||.||....      ..|.++..+-++-|+.+.+.|++++...    +-.+|| +||+++.++.|            +..
T Consensus        72 iHFAa~~~V------gESv~~Pl~Yy~NNv~gTl~Ll~am~~~----gv~~~v-FSStAavYG~p~~~PI~E~~~~~p~N  140 (329)
T COG1087          72 VHFAASISV------GESVQNPLKYYDNNVVGTLNLIEAMLQT----GVKKFI-FSSTAAVYGEPTTSPISETSPLAPIN  140 (329)
T ss_pred             EECcccccc------chhhhCHHHHHhhchHhHHHHHHHHHHh----CCCEEE-EecchhhcCCCCCcccCCCCCCCCCC
Confidence            999997654      3677788899999999999988887664    323455 56767766644            346


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEe
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVS  197 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~  197 (280)
                      +|+.||.+.+.+.+.+++.+   +.++.++.
T Consensus       141 PYG~sKlm~E~iL~d~~~a~---~~~~v~LR  168 (329)
T COG1087         141 PYGRSKLMSEEILRDAAKAN---PFKVVILR  168 (329)
T ss_pred             cchhHHHHHHHHHHHHHHhC---CCcEEEEE
Confidence            99999999999999998875   34554444

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.65  E-value=1.5e-14  Score=126.18  Aligned_cols=210  Identities=16%  Similarity=0.093  Sum_probs=138.2

Q ss_pred             EEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEEEC
Q 023553           22 LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNN  101 (280)
Q Consensus        22 lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~  101 (280)
                      |||||+|.||..+++.|.+.|+.|+++.+.                   ..+|+++.+++.++++..     ++|+|||+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih~   56 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------KELDLTRQADVEAFFAKE-----KPTYVILA   56 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-------------------ccCCCCCHHHHHHHHhcc-----CCCEEEEe
Confidence            699999999999999999999988766432                   137999999887776642     68999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-------------C--C-C
Q 023553          102 AGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-------------L--G-P  165 (280)
Q Consensus       102 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-------------~--~-~  165 (280)
                      |+.....   .  ...++....++.|+.++..+++++...    +-.++|++||.....+.             +  + .
T Consensus        57 A~~~~~~---~--~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  127 (306)
T PLN02725         57 AAKVGGI---H--ANMTYPADFIRENLQIQTNVIDAAYRH----GVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN  127 (306)
T ss_pred             eeeeccc---c--hhhhCcHHHHHHHhHHHHHHHHHHHHc----CCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence            9874310   0  111223467889999999888888653    34689999996542211             1  1 2


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh---------ccCCCC
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN---------ANMQGT  236 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  236 (280)
                      ..|+.+|.+.+.+++.+.+++   ++++..+.|+.+..+..................+.......         ......
T Consensus       128 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~  204 (306)
T PLN02725        128 EWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE  204 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence            249999999999988876663   68999999999988863211000000000011110000000         111247


Q ss_pred             CCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          237 ELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       237 ~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++.++|++++++.++....   .++.+++.+|..
T Consensus       205 ~i~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~  235 (306)
T PLN02725        205 FLHVDDLADAVVFLMRRYS---GAEHVNVGSGDE  235 (306)
T ss_pred             cccHHHHHHHHHHHHhccc---cCcceEeCCCCc
Confidence            8999999999999986421   235567876643

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.64  E-value=9.4e-15  Score=133.28  Aligned_cols=218  Identities=14%  Similarity=0.069  Sum_probs=144.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +.++++||||+|.||+.+++.|.+.|++|++++|...........+.....+.++..|+.+..     +       .++|
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~-------~~~D  186 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----L-------LEVD  186 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----c-------cCCC
Confidence            567899999999999999999999999999998864322211112222235667788887542     1       2799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc---------------
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG---------------  161 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~---------------  161 (280)
                      +|||.|+....  ... .   .+....+++|+.+..++++++...    + .++|++||.+....               
T Consensus       187 ~ViHlAa~~~~--~~~-~---~~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  255 (436)
T PLN02166        187 QIYHLACPASP--VHY-K---YNPVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLEHPQKETYWGNVN  255 (436)
T ss_pred             EEEECceeccc--hhh-c---cCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHHHhCCCCCCCCCccccccCC
Confidence            99999986533  111 1   234678999999999999888653    2 48999998754321               


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc-------C
Q 023553          162 -GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-------M  233 (280)
Q Consensus       162 -~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  233 (280)
                       ......|+.+|.+.+.+++.+.+.   .++.+..+.|+.+..+.....  .......   ....+..+...       .
T Consensus       256 p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~--~~~~i~~---~i~~~l~~~~i~v~g~g~~  327 (436)
T PLN02166        256 PIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLD--DGRVVSN---FVAQTIRKQPMTVYGDGKQ  327 (436)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCC--ccchHHH---HHHHHhcCCCcEEeCCCCe
Confidence             112356999999999999988665   478889999998888753211  0000000   00111111110       1


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       234 ~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ...++..+|+++++..++...    .+..+++.+|.
T Consensus       328 ~rdfi~V~Dva~ai~~~~~~~----~~giyNIgs~~  359 (436)
T PLN02166        328 TRSFQYVSDLVDGLVALMEGE----HVGPFNLGNPG  359 (436)
T ss_pred             EEeeEEHHHHHHHHHHHHhcC----CCceEEeCCCC
Confidence            246899999999999988532    23478887664

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.64  E-value=1.7e-14  Score=130.04  Aligned_cols=217  Identities=13%  Similarity=0.076  Sum_probs=142.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH---HHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ---VCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++++||||+|+||+.+++.|+++|++|+++.|+......   ..+.......+.++.+|++|++++.++++..   .
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---~  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---G  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---C
Confidence            568899999999999999999999999999999998754321   1111111235778999999999988877643   1


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+|||+++....  .         ..+.+++|+.+..++++++..    .+-+++|++||.....   +...|..+|
T Consensus       135 ~~~D~Vi~~aa~~~~--~---------~~~~~~vn~~~~~~ll~aa~~----~gv~r~V~iSS~~v~~---p~~~~~~sK  196 (390)
T PLN02657        135 DPVDVVVSCLASRTG--G---------VKDSWKIDYQATKNSLDAGRE----VGAKHFVLLSAICVQK---PLLEFQRAK  196 (390)
T ss_pred             CCCcEEEECCccCCC--C---------CccchhhHHHHHHHHHHHHHH----cCCCEEEEEeeccccC---cchHHHHHH
Confidence            279999999874321  1         113356788888777777643    4457899999987543   345688889


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCC-CCCCCHHHHHHHHHHhc
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ-GTELTANDVANAVLFLA  251 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~i~~l~  251 (280)
                      ...+...+.     ...+++...+.|+.+...+....       .....+............ ..+++.+|+|+++..++
T Consensus       197 ~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~~~-------~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~  264 (390)
T PLN02657        197 LKFEAELQA-----LDSDFTYSIVRPTAFFKSLGGQV-------EIVKDGGPYVMFGDGKLCACKPISEADLASFIADCV  264 (390)
T ss_pred             HHHHHHHHh-----ccCCCCEEEEccHHHhcccHHHH-------HhhccCCceEEecCCcccccCceeHHHHHHHHHHHH
Confidence            888776643     23689999999988764321100       000000000000000000 12578999999999888


Q ss_pred             CCCCCceeecEEEeCC
Q 023553          252 SDEARYISGTNLMVDG  267 (280)
Q Consensus       252 s~~~~~~~G~~i~~dg  267 (280)
                      ...  ...|+++++.|
T Consensus       265 ~~~--~~~~~~~~Igg  278 (390)
T PLN02657        265 LDE--SKINKVLPIGG  278 (390)
T ss_pred             hCc--cccCCEEEcCC
Confidence            532  23578899876

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.63  E-value=2.9e-14  Score=123.30  Aligned_cols=195  Identities=19%  Similarity=0.137  Sum_probs=135.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +++||||+|.||+.+++.|.+.|++|+++.|+                    .+|+.+.+++.++++..     ++|++|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------~~d~~~~~~~~~~~~~~-----~~d~vi   55 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS--------------------QLDLTDPEALERLLRAI-----RPDAVV   55 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------ccCCCCHHHHHHHHHhC-----CCCEEE
Confidence            37999999999999999999999999999885                    36999999988777642     689999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCccc
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  168 (280)
                      |+|+....  .    .........+++|+.+..++++++...    + .++|++||.....+           ..+...|
T Consensus        56 ~~a~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y  124 (287)
T TIGR01214        56 NTAAYTDV--D----GAESDPEKAFAVNALAPQNLARAAARH----G-ARLVHISTDYVFDGEGKRPYREDDATNPLNVY  124 (287)
T ss_pred             ECCccccc--c----ccccCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchh
Confidence            99986532  1    112335677899999999999987542    2 48999998653221           1134689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc------CCCCCCCHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN------MQGTELTAND  242 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~d  242 (280)
                      +.+|.+.+.+++.+       +.++..+.|+.+..+.....+.         ..+.....+...      ....++..+|
T Consensus       125 ~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~v~v~D  188 (287)
T TIGR01214       125 GQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFV---------RTMLRLAGRGEELRVVDDQIGSPTYAKD  188 (287)
T ss_pred             hHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHH---------HHHHHHhhcCCCceEecCCCcCCcCHHH
Confidence            99999999888764       3578899999998876321110         001111111000      1245678999


Q ss_pred             HHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          243 VANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       243 va~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      +++++..++...  ...|+.+++.++
T Consensus       189 va~a~~~~~~~~--~~~~~~~ni~~~  212 (287)
T TIGR01214       189 LARVIAALLQRL--ARARGVYHLANS  212 (287)
T ss_pred             HHHHHHHHHhhc--cCCCCeEEEECC
Confidence            999999998543  123556666554

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.61  E-value=6.5e-14  Score=122.57  Aligned_cols=220  Identities=15%  Similarity=0.080  Sum_probs=141.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           21 ALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +|||||+|.||+.+++.|.++|+ .|++++|+.... ... .+.    ...+..|+.+++.++.+.+.   .+.++|++|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~----~~~~~~d~~~~~~~~~~~~~---~~~~~D~vv   71 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLA----DLVIADYIDKEDFLDRLEKG---AFGKIEAIF   71 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhh----heeeeccCcchhHHHHHHhh---ccCCCCEEE
Confidence            68999999999999999999998 688887654321 111 111    12456788887666554442   346899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCccc
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  168 (280)
                      |+|+....        +.++....+++|+.+..++++++...    + .++|++||......           ..+...|
T Consensus        72 h~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y  138 (314)
T TIGR02197        72 HQGACSDT--------TETDGEYMMENNYQYSKRLLDWCAEK----G-IPFIYASSAATYGDGEAGFREGRELERPLNVY  138 (314)
T ss_pred             ECccccCc--------cccchHHHHHHHHHHHHHHHHHHHHh----C-CcEEEEccHHhcCCCCCCcccccCcCCCCCHH
Confidence            99986421        12345778899999999999887653    2 47999999654321           1145689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc-------------cCCC
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------------NMQG  235 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~  235 (280)
                      +.+|.+.+.+++....+. ..++.+..+.|+.+..+.............   ...........             ....
T Consensus       139 ~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~  214 (314)
T TIGR02197       139 GYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAF---HLFNQIKAGGNVKLFKSSEGFKDGEQLR  214 (314)
T ss_pred             HHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHH---HHHHHHhcCCCeEEecCccccCCCCcee
Confidence            999999999998643222 124678888898888775321100000000   00111111100             0114


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       236 ~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .++..+|+++++..++..    ..+.++++.+|..
T Consensus       215 ~~i~v~D~a~~i~~~~~~----~~~~~yni~~~~~  245 (314)
T TIGR02197       215 DFVYVKDVVDVNLWLLEN----GVSGIFNLGTGRA  245 (314)
T ss_pred             eeEEHHHHHHHHHHHHhc----ccCceEEcCCCCC
Confidence            688999999999999864    2456888877643

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.59  E-value=1.4e-13  Score=120.95  Aligned_cols=205  Identities=13%  Similarity=0.054  Sum_probs=136.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +++||||+|.||+.++++|.++|++|.++.|+.+......     ...+.++.+|++|++++.+.++       ++|++|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-----~~~v~~v~~Dl~d~~~l~~al~-------g~d~Vi   69 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-----EWGAELVYGDLSLPETLPPSFK-------GVTAII   69 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-----hcCCEEEECCCCCHHHHHHHHC-------CCCEEE
Confidence            6999999999999999999999999999999865432221     1247788999999988766555       789999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHH
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN  179 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  179 (280)
                      |.++....           +.....++|+.+..++++++..    .+-.++|++||..+..  .+...|..+|...+.+.
T Consensus        70 ~~~~~~~~-----------~~~~~~~~~~~~~~~l~~aa~~----~gvkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~l  132 (317)
T CHL00194         70 DASTSRPS-----------DLYNAKQIDWDGKLALIEAAKA----AKIKRFIFFSILNAEQ--YPYIPLMKLKSDIEQKL  132 (317)
T ss_pred             ECCCCCCC-----------CccchhhhhHHHHHHHHHHHHH----cCCCEEEEeccccccc--cCCChHHHHHHHHHHHH
Confidence            98753211           1233556788888888777754    3345999999864321  12356888888877655


Q ss_pred             HHHHHHHCCCCeEEEEEeCCceeccccccC-CCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCce
Q 023553          180 KNVAAELGKYGIRVNCVSPYAVATGLALAH-LPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYI  258 (280)
Q Consensus       180 ~~la~e~~~~gi~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~  258 (280)
                      +       ..|+....+.|+.+...+.... .+.  .     .....+... ......+++.+|+|+++..++...  ..
T Consensus       133 ~-------~~~l~~tilRp~~~~~~~~~~~~~~~--~-----~~~~~~~~~-~~~~~~~i~v~Dva~~~~~~l~~~--~~  195 (317)
T CHL00194        133 K-------KSGIPYTIFRLAGFFQGLISQYAIPI--L-----EKQPIWITN-ESTPISYIDTQDAAKFCLKSLSLP--ET  195 (317)
T ss_pred             H-------HcCCCeEEEeecHHhhhhhhhhhhhh--c-----cCCceEecC-CCCccCccCHHHHHHHHHHHhcCc--cc
Confidence            3       2478888899986543221110 000  0     000000000 011135678899999999988543  23


Q ss_pred             eecEEEeCCCcc
Q 023553          259 SGTNLMVDGGFT  270 (280)
Q Consensus       259 ~G~~i~~dgG~~  270 (280)
                      .|+++++.|+-.
T Consensus       196 ~~~~~ni~g~~~  207 (317)
T CHL00194        196 KNKTFPLVGPKS  207 (317)
T ss_pred             cCcEEEecCCCc
Confidence            589999988753

>PLN02996 fatty acyl-CoA reductase

Probab=99.57  E-value=3.7e-13  Score=124.59  Aligned_cols=228  Identities=14%  Similarity=0.102  Sum_probs=146.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecCcch---HHHHHHHh-------------CC------CCCeEE
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA---KVCIADVQDNL---GQQVCQSL-------------GG------EPDTFF   70 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~---~Vi~~~r~~~~---~~~~~~~~-------------~~------~~~~~~   70 (280)
                      ++||+++||||+|.||+.++..|++.+.   +|++..|....   .+.+..++             ..      ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            7899999999999999999999997642   47777776421   11111010             00      146888


Q ss_pred             EecCCCC-------HHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcc
Q 023553           71 CHCDVTK-------EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI  143 (280)
Q Consensus        71 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~  143 (280)
                      +..|+++       .+.+.++++       .+|+|||+|+....     .    ++.+..+++|+.+..++++.+...  
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-----~----~~~~~~~~~Nv~gt~~ll~~a~~~--  150 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-----D----ERYDVALGINTLGALNVLNFAKKC--  150 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-----c----CCHHHHHHHHHHHHHHHHHHHHhc--
Confidence            9999984       333333333       79999999987532     1    245778999999999998887653  


Q ss_pred             cCCCceEEEEccccccccCC------------------------------------------------------------
Q 023553          144 PQTKGTIISICSVAGAIGGL------------------------------------------------------------  163 (280)
Q Consensus       144 ~~~~g~iv~isS~~~~~~~~------------------------------------------------------------  163 (280)
                       .+-.+++++||....-...                                                            
T Consensus       151 -~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (491)
T PLN02996        151 -VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKL  229 (491)
T ss_pred             -CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHh
Confidence             1234899999866431100                                                            


Q ss_pred             --CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhH-HHHhhh-------ccC
Q 023553          164 --GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR-NFVARN-------ANM  233 (280)
Q Consensus       164 --~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~  233 (280)
                        ....|+.||++.+.+++..+     .++.+..+.|..|..+........-+.... ..... .+..+.       ...
T Consensus       230 ~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~-~~~i~~~~~~g~~~~~~gdg~~  303 (491)
T PLN02996        230 HGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRT-IDSVIVGYGKGKLTCFLADPNS  303 (491)
T ss_pred             CCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhh-HHHHHHHhccceEeEEecCCCe
Confidence              11359999999999997542     279999999999999874332111010000 00010 001111       112


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCC-CceeecEEEeCCC
Q 023553          234 QGTELTANDVANAVLFLASDEA-RYISGTNLMVDGG  268 (280)
Q Consensus       234 ~~~~~~~~dva~~i~~l~s~~~-~~~~G~~i~~dgG  268 (280)
                      ...++.++|++++++.++.... ....+.++++.+|
T Consensus       304 ~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        304 VLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             ecceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            3678999999999988875321 1124678999888

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.55  E-value=8.5e-14  Score=121.32  Aligned_cols=147  Identities=20%  Similarity=0.097  Sum_probs=108.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      +++|||||+|.||+++++.|.+.| +|++++|...                .+..|++|.+.+.++++..     ++|++
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~-----~~D~V   58 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------DYCGDFSNPEGVAETVRKI-----RPDVI   58 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------cccCCCCCHHHHHHHHHhc-----CCCEE
Confidence            369999999999999999999999 7888887532                2347999999987777642     79999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCcc
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHA  167 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-----------~~~~~~  167 (280)
                      ||+|+.....      ...++....+++|+.++.++++++...     +.++|++||.....+           ..+...
T Consensus        59 ih~Aa~~~~~------~~~~~~~~~~~~N~~~~~~l~~aa~~~-----g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~  127 (299)
T PRK09987         59 VNAAAHTAVD------KAESEPEFAQLLNATSVEAIAKAANEV-----GAWVVHYSTDYVFPGTGDIPWQETDATAPLNV  127 (299)
T ss_pred             EECCccCCcc------hhhcCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEccceEECCCCCCCcCCCCCCCCCCH
Confidence            9999976431      122234566789999999999888653     248999998643211           123457


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccc
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL  205 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  205 (280)
                      |+.+|.+.+.+++.+..       ....+.|+++..+.
T Consensus       128 Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp~  158 (299)
T PRK09987        128 YGETKLAGEKALQEHCA-------KHLIFRTSWVYAGK  158 (299)
T ss_pred             HHHHHHHHHHHHHHhCC-------CEEEEecceecCCC
Confidence            99999999998865422       24777888887764

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.53  E-value=1.8e-12  Score=124.76  Aligned_cols=223  Identities=19%  Similarity=0.132  Sum_probs=141.7

Q ss_pred             EEEEEcCCChHHHHHHHHHH--HcCCeEEEEecCcch--HHHHHHHhCCCCCeEEEecCCCCHHHH--HHHHHHHHHHhC
Q 023553           20 VALITGGATGIGESTVRLFH--KHGAKVCIADVQDNL--GQQVCQSLGGEPDTFFCHCDVTKEEDV--CSAVDLTVEKFG   93 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~--~~g~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~~~~~~~~~~g   93 (280)
                      ++|||||+|.||+.+++.|+  +.|++|++++|+...  ........ ...++.++.+|+++++..  ...++.+    .
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~   76 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYW-GADRVVPLVGDLTEPGLGLSEADIAEL----G   76 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhc-CCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence            69999999999999999999  579999999996532  22221111 114678889999985310  1112222    4


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------  162 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----------  162 (280)
                      ++|++||+|+.....      .+   .....++|+.+..++++.+..    .+..++|++||.......           
T Consensus        77 ~~D~Vih~Aa~~~~~------~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v~g~~~~~~~e~~~~~  143 (657)
T PRK07201         77 DIDHVVHLAAIYDLT------AD---EEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAVAGDYEGVFREDDFDE  143 (657)
T ss_pred             CCCEEEECceeecCC------CC---HHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEeccccccCccCccccccchh
Confidence            899999999975321      12   345678899999888887654    334689999987653211           


Q ss_pred             --CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc---c-----
Q 023553          163 --LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA---N-----  232 (280)
Q Consensus       163 --~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----  232 (280)
                        .....|+.+|...+.+++.      ..|+++..+.|+.+..+.....................+ ....   +     
T Consensus       144 ~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  216 (657)
T PRK07201        144 GQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKL-AKLPSWLPMVGPD  216 (657)
T ss_pred             hcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHh-ccCCcccccccCC
Confidence              1235799999999988753      247899999999998764211110000000000000000 0000   0     


Q ss_pred             -CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          233 -MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       233 -~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                       ....++..+|+++++..++..  ....|+++++.++-
T Consensus       217 ~~~~~~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~  252 (657)
T PRK07201        217 GGRTNIVPVDYVADALDHLMHK--DGRDGQTFHLTDPK  252 (657)
T ss_pred             CCeeeeeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCC
Confidence             012467899999999999853  34578899997764

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.53  E-value=7.9e-13  Score=112.82  Aligned_cols=250  Identities=14%  Similarity=0.092  Sum_probs=180.3

Q ss_pred             CCcEEEEEcC-CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC--
Q 023553           17 VGRVALITGG-ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG--   93 (280)
Q Consensus        17 ~~k~vlItGa-s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   93 (280)
                      +..+|||.|. ..-|++.+|..|-++|+-|+++..+.+..+...++-  ..++.....|..++.++...+.+..+...  
T Consensus         2 R~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~--~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p   79 (299)
T PF08643_consen    2 RKEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED--RPDIRPLWLDDSDPSSIHASLSRFASLLSRP   79 (299)
T ss_pred             ceeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc--CCCCCCcccCCCCCcchHHHHHHHHHHhcCC
Confidence            3568899996 799999999999999999999999988766554443  45677888888887777777777766554  


Q ss_pred             ------------CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC--CCceEEEEc-cccc
Q 023553           94 ------------TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ--TKGTIISIC-SVAG  158 (280)
Q Consensus        94 ------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~g~iv~is-S~~~  158 (280)
                                  ++..+|....... +.++++.++.++|.+.++.|+..++.+++.++|+|..+  .+.+||.+. |...
T Consensus        80 ~~p~~~~~~h~l~L~svi~~Psl~y-p~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~s  158 (299)
T PF08643_consen   80 HVPFPGAPPHHLQLKSVIFIPSLSY-PTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISS  158 (299)
T ss_pred             CCCCCCCCCceeEEEEEEEecCCCC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhh
Confidence                        4567777766554 44899999999999999999999999999999999772  345655554 7777


Q ss_pred             cccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceecccc--ccCCCcc-----h-hhhhhh---hhhHHHH
Q 023553          159 AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA--LAHLPEE-----E-RTEDAM---VGFRNFV  227 (280)
Q Consensus       159 ~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~--~~~~~~~-----~-~~~~~~---~~~~~~~  227 (280)
                      ....|..++-.....++.+|.+.|++|+.+.||.|..+..|.++-...  ....+..     + ..|...   .+-..|.
T Consensus       159 sl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~~~~~s~~~~~~~~~se~~~W~~~~r~lY~~~y~  238 (299)
T PF08643_consen  159 SLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGNFGQPSNYKYLSLAGSEVLAWTSIMRALYGPNYS  238 (299)
T ss_pred             ccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccccCCCcccccccccCCCCcccCchhHHhhhchhHH
Confidence            788888899999999999999999999999999999999999877622  1111111     0 001100   0111111


Q ss_pred             hhhc---cC--C-CCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          228 ARNA---NM--Q-GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       228 ~~~~---~~--~-~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ....   +.  . ++-.+..++-.++..++....   .|.++.++-|-+.+
T Consensus       239 ~~~~~~~~~~~~~~~Gs~lr~L~~~vfd~~~~~~---~~~v~y~G~Gs~~Y  286 (299)
T PF08643_consen  239 SIQSSAIPAGSGRGKGSSLRELHNAVFDALYGSS---KGSVVYVGRGSRIY  286 (299)
T ss_pred             HHHhhccCCCCCCCCCCHHHHHHHHHHHhhcCCC---CCCEEEEcCceeHH
Confidence            1111   00  0 144566677777777775432   78888888775543

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK05865 hypothetical protein; Provisional

Probab=99.51  E-value=1.1e-12  Score=126.95  Aligned_cols=187  Identities=16%  Similarity=0.109  Sum_probs=128.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +++||||+|+||++++++|+++|+.|++++|+....      ..  ..+.++.+|+++.+++.++++       ++|++|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~--~~v~~v~gDL~D~~~l~~al~-------~vD~VV   66 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WP--SSADFIAADIRDATAVESAMT-------GADVVA   66 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cc--cCceEEEeeCCCHHHHHHHHh-------CCCEEE
Confidence            699999999999999999999999999999875321      11  246788999999998876665       699999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHH
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN  179 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  179 (280)
                      |+|+...    .           .+++|+.+..++++++..    .+.++||++||..              |.+.+.++
T Consensus        67 HlAa~~~----~-----------~~~vNv~GT~nLLeAa~~----~gvkr~V~iSS~~--------------K~aaE~ll  113 (854)
T PRK05865         67 HCAWVRG----R-----------NDHINIDGTANVLKAMAE----TGTGRIVFTSSGH--------------QPRVEQML  113 (854)
T ss_pred             ECCCccc----c-----------hHHHHHHHHHHHHHHHHH----cCCCeEEEECCcH--------------HHHHHHHH
Confidence            9997531    1           357899998877766543    4457999999863              77777665


Q ss_pred             HHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCcee
Q 023553          180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYIS  259 (280)
Q Consensus       180 ~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~  259 (280)
                      +    +   +++.+..+.|+.+..+......      ... .....+..........+++++|++++++.++...  ...
T Consensus       114 ~----~---~gl~~vILRp~~VYGP~~~~~i------~~l-l~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~--~~~  177 (854)
T PRK05865        114 A----D---CGLEWVAVRCALIFGRNVDNWV------QRL-FALPVLPAGYADRVVQVVHSDDAQRLLVRALLDT--VID  177 (854)
T ss_pred             H----H---cCCCEEEEEeceEeCCChHHHH------HHH-hcCceeccCCCCceEeeeeHHHHHHHHHHHHhCC--CcC
Confidence            3    2   4789999999999887411100      000 0000000000000125789999999999888532  223


Q ss_pred             ecEEEeCCCcc
Q 023553          260 GTNLMVDGGFT  270 (280)
Q Consensus       260 G~~i~~dgG~~  270 (280)
                      |+.+++.+|..
T Consensus       178 ggvyNIgsg~~  188 (854)
T PRK05865        178 SGPVNLAAPGE  188 (854)
T ss_pred             CCeEEEECCCc
Confidence            56788877653

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.50  E-value=8.4e-13  Score=106.54  Aligned_cols=172  Identities=15%  Similarity=0.133  Sum_probs=122.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEEE
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  100 (280)
                      |+|+||+|.+|+.+++.|.+.|++|+++.|++++.++       ...+.++.+|+.|++++.+.+.       +.|++|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~   66 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------SPGVEIIQGDLFDPDSVKAALK-------GADAVIH   66 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------CTTEEEEESCTTCHHHHHHHHT-------TSSEEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------ccccccceeeehhhhhhhhhhh-------hcchhhh
Confidence            6899999999999999999999999999999987766       4578899999999988766665       8999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC---------ccchhh
Q 023553          101 NAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP---------HAYTGS  171 (280)
Q Consensus       101 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~---------~~Y~~s  171 (280)
                      ++|....           +            ...++.++..+++.+-.+++++|+.......+..         ..|...
T Consensus        67 ~~~~~~~-----------~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (183)
T PF13460_consen   67 AAGPPPK-----------D------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARD  123 (183)
T ss_dssp             CCHSTTT-----------H------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHH
T ss_pred             hhhhhcc-----------c------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHH
Confidence            9975421           1            3334555555555666799999988766644332         245555


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |...+.+.       ...+++...+.|+++..+.....   .....            ........++.+|+|++++.++
T Consensus       124 ~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~---~~~~~------------~~~~~~~~i~~~DvA~~~~~~l  181 (183)
T PF13460_consen  124 KREAEEAL-------RESGLNWTIVRPGWIYGNPSRSY---RLIKE------------GGPQGVNFISREDVAKAIVEAL  181 (183)
T ss_dssp             HHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSE---EEESS------------TSTTSHCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHH-------HhcCCCEEEEECcEeEeCCCcce---eEEec------------cCCCCcCcCCHHHHHHHHHHHh
Confidence            55444333       22489999999999987753211   00000            0011136789999999999876

...

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.45  E-value=5e-13  Score=111.11  Aligned_cols=231  Identities=17%  Similarity=0.123  Sum_probs=155.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH-----HHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV-----CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+|++||||-+|-=|.-+++.|.++|+.|..+.|+.......     ...+....++..+.+|++|..++.++++++   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            379999999999999999999999999999998874322111     111122345888999999999999999987   


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-----------
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------  160 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-----------  160 (280)
                        .+|-++|.|+.+.      -..|+++...+.+++..|.++++.++.-+=  .+.-+|..-||. ..+           
T Consensus        78 --~PdEIYNLaAQS~------V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStS-E~fG~v~~~pq~E~  146 (345)
T COG1089          78 --QPDEIYNLAAQSH------VGVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTS-ELYGLVQEIPQKET  146 (345)
T ss_pred             --Cchhheecccccc------ccccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccH-HhhcCcccCccccC
Confidence              8999999998654      458889999999999999999999987653  223566555553 222           


Q ss_pred             -cCCCCccchhhHHHHHHHHHHHHHHHC---CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCC
Q 023553          161 -GGLGPHAYTGSKHAVLGLNKNVAAELG---KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT  236 (280)
Q Consensus       161 -~~~~~~~Y~~sK~al~~~~~~la~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (280)
                       |..+.++|+++|.....++..+++.|.   ..||-+|.=+|.-=.|-.+++..-.-......  -...+........+.
T Consensus       147 TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G--~q~~l~lGNldAkRD  224 (345)
T COG1089         147 TPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLG--LQDKLYLGNLDAKRD  224 (345)
T ss_pred             CCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHcc--ccceEEecccccccc
Confidence             234678999999999999998887753   23555555454433333333221100000000  000111112223478


Q ss_pred             CCCHHHHHHHHHHhcCCC--CCce--eecEE
Q 023553          237 ELTANDVANAVLFLASDE--ARYI--SGTNL  263 (280)
Q Consensus       237 ~~~~~dva~~i~~l~s~~--~~~~--~G~~i  263 (280)
                      |+.+.|..++++.+++++  ..|+  ||++.
T Consensus       225 WG~A~DYVe~mwlmLQq~~PddyViATg~t~  255 (345)
T COG1089         225 WGHAKDYVEAMWLMLQQEEPDDYVIATGETH  255 (345)
T ss_pred             ccchHHHHHHHHHHHccCCCCceEEecCcee
Confidence            999999999999998753  3355  45543

>PLN02778 3,5-epimerase/4-reductase

Probab=99.44  E-value=1.6e-11  Score=106.91  Aligned_cols=194  Identities=14%  Similarity=0.090  Sum_probs=119.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .+++|||||+|.||+.+++.|.++|+.|+...                       .|+.+.+.+...++.     .++|+
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-----------------------~~~~~~~~v~~~l~~-----~~~D~   60 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-----------------------GRLENRASLEADIDA-----VKPTH   60 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-----------------------CccCCHHHHHHHHHh-----cCCCE
Confidence            36799999999999999999999999986421                       245555555444442     27999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-----------------
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------------  160 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-----------------  160 (280)
                      +||+|+....+  . .+...++-.+.+++|+.++.++++++...    + -+++++||.....                 
T Consensus        61 ViH~Aa~~~~~--~-~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----g-v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~  132 (298)
T PLN02778         61 VFNAAGVTGRP--N-VDWCESHKVETIRANVVGTLTLADVCRER----G-LVLTNYATGCIFEYDDAHPLGSGIGFKEED  132 (298)
T ss_pred             EEECCcccCCC--C-chhhhhCHHHHHHHHHHHHHHHHHHHHHh----C-CCEEEEecceEeCCCCCCCcccCCCCCcCC
Confidence            99999986431  1 11223445788999999999999998663    1 2345555432110                 


Q ss_pred             -cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc--cCCCCC
Q 023553          161 -GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA--NMQGTE  237 (280)
Q Consensus       161 -~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  237 (280)
                       +.+....|+.||.+.+.+++.++..   .++|+     +....+..  ..+ ...       .........  ...+.+
T Consensus       133 ~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~~~--~~~-~~f-------i~~~~~~~~~~~~~~s~  194 (298)
T PLN02778        133 TPNFTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISSDL--SNP-RNF-------ITKITRYEKVVNIPNSM  194 (298)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCccc--ccH-HHH-------HHHHHcCCCeeEcCCCC
Confidence             0112368999999999999876532   33443     11111100  000 000       111111111  111458


Q ss_pred             CCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          238 LTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       238 ~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ...+|++++++.++...   .+ ..+++.+|-
T Consensus       195 ~yv~D~v~al~~~l~~~---~~-g~yNigs~~  222 (298)
T PLN02778        195 TILDELLPISIEMAKRN---LT-GIYNFTNPG  222 (298)
T ss_pred             EEHHHHHHHHHHHHhCC---CC-CeEEeCCCC
Confidence            89999999999998542   23 488886664

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.43  E-value=6.2e-12  Score=106.72  Aligned_cols=159  Identities=16%  Similarity=0.175  Sum_probs=98.9

Q ss_pred             EEcCCChHHHHHHHHHHHcCC--eEEEEecCcch---HHHHHHHhC-----------CCCCeEEEecCCCCHH------H
Q 023553           23 ITGGATGIGESTVRLFHKHGA--KVCIADVQDNL---GQQVCQSLG-----------GEPDTFFCHCDVTKEE------D   80 (280)
Q Consensus        23 ItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~---~~~~~~~~~-----------~~~~~~~~~~D~~~~~------~   80 (280)
                      ||||+|.||..+..+|++.+.  +|++..|....   .+.+.+.+.           ...++.++..|++++.      +
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999997633   222322221           1358999999999853      3


Q ss_pred             HHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc
Q 023553           81 VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI  160 (280)
Q Consensus        81 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~  160 (280)
                      ..++.+       .+|++||+|+.....         ..+++..++|+.|..++++.+..    .+..+++++||.....
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~---------~~~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iSTa~v~~  140 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFN---------APYSELRAVNVDGTRNLLRLAAQ----GKRKRFHYISTAYVAG  140 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS----------S--EEHHHHHHHHHHHHHHHTS----SS---EEEEEEGGGTT
T ss_pred             hhcccc-------ccceeeecchhhhhc---------ccchhhhhhHHHHHHHHHHHHHh----ccCcceEEeccccccC
Confidence            333333       799999999876431         13455788999999998888763    2223999999932211


Q ss_pred             cC--------------------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceecc
Q 023553          161 GG--------------------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATG  204 (280)
Q Consensus       161 ~~--------------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~  204 (280)
                      ..                    .....|..||...|.+.+..+.+   .|+.+..+.||.+..+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  141 SRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGD  201 (249)
T ss_dssp             S-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-S
T ss_pred             CCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCccccc
Confidence            10                    12358999999999999988776   4788999999999773

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.42  E-value=7.9e-12  Score=106.14  Aligned_cols=155  Identities=21%  Similarity=0.235  Sum_probs=121.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC----cchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQ----DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++||||||+|-||.+++.+|.+.|+.|++++.-    .+.++...+.......+.+...|+.|.+.+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            6899999999999999999999999999998754    3445544444455568899999999999988877765     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------C
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------G  162 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-----------~  162 (280)
                      ++|.|+|-|+.....      -+.+........|+.+.++++.....    .+...+|+.||....-.           .
T Consensus        77 ~fd~V~Hfa~~~~vg------eS~~~p~~Y~~nNi~gtlnlLe~~~~----~~~~~~V~sssatvYG~p~~ip~te~~~t  146 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVG------ESMENPLSYYHNNIAGTLNLLEVMKA----HNVKALVFSSSATVYGLPTKVPITEEDPT  146 (343)
T ss_pred             CCceEEeehhhhccc------hhhhCchhheehhhhhHHHHHHHHHH----cCCceEEEecceeeecCcceeeccCcCCC
Confidence            799999999987652      34445577888999999987777655    44567888877554321           1


Q ss_pred             C-CCccchhhHHHHHHHHHHHHHHHC
Q 023553          163 L-GPHAYTGSKHAVLGLNKNVAAELG  187 (280)
Q Consensus       163 ~-~~~~Y~~sK~al~~~~~~la~e~~  187 (280)
                      . +..+|+.+|.+++...+.+...+.
T Consensus       147 ~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  147 DQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCcchhhhHHHHHHHHhhhcccc
Confidence            2 567999999999999999877754

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.41  E-value=2.9e-12  Score=110.93  Aligned_cols=197  Identities=16%  Similarity=0.090  Sum_probs=126.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      ++||||++|-||.++++.|.+.|+.|+.++|+                    .+|++|.+++.+++++.     ++|++|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------~~dl~d~~~~~~~~~~~-----~pd~Vi   56 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS--------------------DLDLTDPEAVAKLLEAF-----KPDVVI   56 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------CS-TTSHHHHHHHHHHH-------SEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------hcCCCCHHHHHHHHHHh-----CCCeEe
Confidence            79999999999999999999999999999777                    47999999998888866     899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCccc
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  168 (280)
                      |+|+....      +.-.++-+..+.+|+.++..+++.+...     +.++|++||.....+.           .+...|
T Consensus        57 n~aa~~~~------~~ce~~p~~a~~iN~~~~~~la~~~~~~-----~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~Y  125 (286)
T PF04321_consen   57 NCAAYTNV------DACEKNPEEAYAINVDATKNLAEACKER-----GARLIHISTDYVFDGDKGGPYTEDDPPNPLNVY  125 (286)
T ss_dssp             E------H------HHHHHSHHHHHHHHTHHHHHHHHHHHHC-----T-EEEEEEEGGGS-SSTSSSB-TTS----SSHH
T ss_pred             ccceeecH------HhhhhChhhhHHHhhHHHHHHHHHHHHc-----CCcEEEeeccEEEcCCcccccccCCCCCCCCHH
Confidence            99987532      1223446789999999999999988653     4699999997554332           134689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh------hccCCCCCCCHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR------NANMQGTELTAND  242 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d  242 (280)
                      +-+|...|..++..   . +   ....+.++++..+- ...+.         .++.....+      .....+..+..+|
T Consensus       126 G~~K~~~E~~v~~~---~-~---~~~IlR~~~~~g~~-~~~~~---------~~~~~~~~~~~~i~~~~d~~~~p~~~~d  188 (286)
T PF04321_consen  126 GRSKLEGEQAVRAA---C-P---NALILRTSWVYGPS-GRNFL---------RWLLRRLRQGEPIKLFDDQYRSPTYVDD  188 (286)
T ss_dssp             HHHHHHHHHHHHHH-----S---SEEEEEE-SEESSS-SSSHH---------HHHHHHHHCTSEEEEESSCEE--EEHHH
T ss_pred             HHHHHHHHHHHHHh---c-C---CEEEEecceecccC-CCchh---------hhHHHHHhcCCeeEeeCCceeCCEEHHH
Confidence            99999999888762   2 2   46777888887761 11111         011111111      1112356678999


Q ss_pred             HHHHHHHhcCCCCC-ceeecEEEeCCCc
Q 023553          243 VANAVLFLASDEAR-YISGTNLMVDGGF  269 (280)
Q Consensus       243 va~~i~~l~s~~~~-~~~G~~i~~dgG~  269 (280)
                      +|+.+..|+..... .-.+.++.+.|.-
T Consensus       189 lA~~i~~l~~~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  189 LARVILELIEKNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             HHHHHHHHHHHHHH-GGG-EEEE---BS
T ss_pred             HHHHHHHHHHhcccccccceeEEEecCc
Confidence            99999999964321 1125666666543

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.40  E-value=7.9e-12  Score=109.45  Aligned_cols=232  Identities=14%  Similarity=0.114  Sum_probs=155.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++.+++||||+|.+|+.++++|.+.+  ..|.+++..+....-..+... .+..+.++++|+.+..++...++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            57899999999999999999999998  778888887652111111111 24678899999999988776666       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC---------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG---------  164 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~---------  164 (280)
                      +. .++|+|....+      ..-..+-+..+++|+.|+.++++++..    .+-.++|++||.....+...         
T Consensus        76 ~~-~Vvh~aa~~~~------~~~~~~~~~~~~vNV~gT~nvi~~c~~----~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p  144 (361)
T KOG1430|consen   76 GA-VVVHCAASPVP------DFVENDRDLAMRVNVNGTLNVIEACKE----LGVKRLIYTSSAYVVFGGEPIINGDESLP  144 (361)
T ss_pred             Cc-eEEEeccccCc------cccccchhhheeecchhHHHHHHHHHH----hCCCEEEEecCceEEeCCeecccCCCCCC
Confidence            66 55555543322      122235788999999999888888766    44569999999877654321         


Q ss_pred             -----CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCC
Q 023553          165 -----PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT  239 (280)
Q Consensus       165 -----~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (280)
                           ...|+.||+-.+.+++....   ..+....++.|-.|..|......+.--....  -+...+..........+..
T Consensus       145 ~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~--~g~~~f~~g~~~~~~~~~~  219 (361)
T KOG1430|consen  145 YPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKIVEALK--NGGFLFKIGDGENLNDFTY  219 (361)
T ss_pred             CccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHHHHHHH--ccCceEEeeccccccceEE
Confidence                 24899999999988876543   3568899999999999987665543110000  0000000111111245556


Q ss_pred             HHHHHHHHH----HhcCCCCCceeecEEEeCCCcccc
Q 023553          240 ANDVANAVL----FLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       240 ~~dva~~i~----~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      .+-++.+.+    .|.+ ....++|+.+.++.|....
T Consensus       220 ~~Nva~ahilA~~aL~~-~~~~~~Gq~yfI~d~~p~~  255 (361)
T KOG1430|consen  220 GENVAWAHILAARALLD-KSPSVNGQFYFITDDTPVR  255 (361)
T ss_pred             echhHHHHHHHHHHHHh-cCCccCceEEEEeCCCcch
Confidence            665666542    2222 5668899999999886543

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.39  E-value=3.4e-12  Score=106.13  Aligned_cols=226  Identities=15%  Similarity=0.116  Sum_probs=161.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKH--GAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~--g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ..|.++||||.+.||...++.++..  .++.+.++--. -...+..+......+..++..|+.++..+..+++.     .
T Consensus         5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----~   79 (331)
T KOG0747|consen    5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----E   79 (331)
T ss_pred             ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhcc-----C
Confidence            3499999999999999999999986  45555543221 01123334445567899999999999887766653     4


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc------------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------------  161 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~------------  161 (280)
                      ++|.+||.|.....      +.+.-+--...+.|+.+...|+++.+...   +--++|++|+....-.            
T Consensus        80 ~id~vihfaa~t~v------d~s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s~  150 (331)
T KOG0747|consen   80 EIDTVIHFAAQTHV------DRSFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEASL  150 (331)
T ss_pred             chhhhhhhHhhhhh------hhhcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCcccccccccccc
Confidence            89999999987654      34444456677899999999999887753   3358999998654322            


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh-------hccC-
Q 023553          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-------NANM-  233 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-  233 (280)
                      ..+..+|+++|+|.+++++++.+.   +|+.+..+.-+.|..|.....        +.++.|..+..+       ..++ 
T Consensus       151 ~nPtnpyAasKaAaE~~v~Sy~~s---y~lpvv~~R~nnVYGP~q~~~--------klipkFi~l~~~~~~~~i~g~g~~  219 (331)
T KOG0747|consen  151 LNPTNPYAASKAAAEMLVRSYGRS---YGLPVVTTRMNNVYGPNQYPE--------KLIPKFIKLAMRGKEYPIHGDGLQ  219 (331)
T ss_pred             CCCCCchHHHHHHHHHHHHHHhhc---cCCcEEEEeccCccCCCcChH--------HHhHHHHHHHHhCCCcceecCccc
Confidence            124579999999999999999777   578999999999988865432        222323332221       2222 


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       234 ~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .+.++.++|+++++...+...   -.|+++++.--..
T Consensus       220 ~rs~l~veD~~ea~~~v~~Kg---~~geIYNIgtd~e  253 (331)
T KOG0747|consen  220 TRSYLYVEDVSEAFKAVLEKG---ELGEIYNIGTDDE  253 (331)
T ss_pred             ceeeEeHHHHHHHHHHHHhcC---CccceeeccCcch
Confidence            477899999999998888652   2689998875543

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.38  E-value=1.5e-10  Score=92.87  Aligned_cols=173  Identities=15%  Similarity=0.088  Sum_probs=119.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      ++++||||+ |+|.++++.|+++|++|++++|+.+..+.+...+.....+.++.+|++|++++.++++.+.+.++++|++
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            368999998 7777899999999999999999987766665545433467788999999999999999999888999999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      |+.+-...                        +-.+..++...=.+.+.-+++++-+..+..+                 
T Consensus        80 v~~vh~~~------------------------~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~-----------------  118 (177)
T PRK08309         80 VAWIHSSA------------------------KDALSVVCRELDGSSETYRLFHVLGSAASDP-----------------  118 (177)
T ss_pred             EEeccccc------------------------hhhHHHHHHHHccCCCCceEEEEeCCcCCch-----------------
Confidence            98875432                        2222333333211222337887754433211                 


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC-CCc
Q 023553          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE-ARY  257 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~-~~~  257 (280)
                       +..+..+...++.-.-|..|++...-.                            .||.+-+|+++.++..++.+ ...
T Consensus       119 -~~~~~~~~~~~~~~~~i~lgf~~~~~~----------------------------~rwlt~~ei~~gv~~~~~~~~~~~  169 (177)
T PRK08309        119 -RIPSEKIGPARCSYRRVILGFVLEDTY----------------------------SRWLTHEEISDGVIKAIESDADEH  169 (177)
T ss_pred             -hhhhhhhhhcCCceEEEEEeEEEeCCc----------------------------cccCchHHHHHHHHHHHhcCCCeE
Confidence             111222333456667778888754421                            67889999999999988754 445


Q ss_pred             eeecE
Q 023553          258 ISGTN  262 (280)
Q Consensus       258 ~~G~~  262 (280)
                      +.|..
T Consensus       170 ~~g~~  174 (177)
T PRK08309        170 VVGTV  174 (177)
T ss_pred             EEEEe
Confidence            56653

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.37  E-value=2.5e-11  Score=102.78  Aligned_cols=181  Identities=21%  Similarity=0.200  Sum_probs=131.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEEE
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  100 (280)
                      +||||++|-+|.++++.|. .+..|+.++|.+                    +|++|++.+.+++.+.     ++|++||
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------~Ditd~~~v~~~i~~~-----~PDvVIn   56 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE--------------------LDITDPDAVLEVIRET-----RPDVVIN   56 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc--------------------ccccChHHHHHHHHhh-----CCCEEEE
Confidence            8999999999999999999 778899887766                    6999999999888876     9999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC-----------CCccch
Q 023553          101 NAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-----------GPHAYT  169 (280)
Q Consensus       101 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~-----------~~~~Y~  169 (280)
                      +|++...      +....+-+..+.+|..++.++++++...     +.++|++|+.....+..           +...|+
T Consensus        57 ~AAyt~v------D~aE~~~e~A~~vNa~~~~~lA~aa~~~-----ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG  125 (281)
T COG1091          57 AAAYTAV------DKAESEPELAFAVNATGAENLARAAAEV-----GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYG  125 (281)
T ss_pred             Ccccccc------ccccCCHHHHHHhHHHHHHHHHHHHHHh-----CCeEEEeecceEecCCCCCCCCCCCCCCChhhhh
Confidence            9998643      2333446889999999999999998654     57899999866544322           356899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh------hccCCCCCCCHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR------NANMQGTELTANDV  243 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~dv  243 (280)
                      .||.+-+..++...    +   +...+...|+.......+ ...         +....+.      ..-..+..++.+|+
T Consensus       126 ~sKl~GE~~v~~~~----~---~~~I~Rtswv~g~~g~nF-v~t---------ml~la~~~~~l~vv~Dq~gsPt~~~dl  188 (281)
T COG1091         126 RSKLAGEEAVRAAG----P---RHLILRTSWVYGEYGNNF-VKT---------MLRLAKEGKELKVVDDQYGSPTYTEDL  188 (281)
T ss_pred             HHHHHHHHHHHHhC----C---CEEEEEeeeeecCCCCCH-HHH---------HHHHhhcCCceEEECCeeeCCccHHHH
Confidence            99999999887653    2   234444455555433111 100         0111011      11223677899999


Q ss_pred             HHHHHHhcCCCC
Q 023553          244 ANAVLFLASDEA  255 (280)
Q Consensus       244 a~~i~~l~s~~~  255 (280)
                      |+++..|+....
T Consensus       189 A~~i~~ll~~~~  200 (281)
T COG1091         189 ADAILELLEKEK  200 (281)
T ss_pred             HHHHHHHHhccc
Confidence            999999986543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.33  E-value=2.1e-10  Score=119.08  Aligned_cols=231  Identities=14%  Similarity=0.031  Sum_probs=143.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC----CeEEEEecCcchHHH---HHHHhC--------CCCCeEEEecCCCCHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHG----AKVCIADVQDNLGQQ---VCQSLG--------GEPDTFFCHCDVTKEEDV   81 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g----~~Vi~~~r~~~~~~~---~~~~~~--------~~~~~~~~~~D~~~~~~~   81 (280)
                      ..++++|||++|.||..+++.|++.+    ++|++..|+......   ..+...        ...++.++.+|++++.--
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35899999999999999999999987    788888887543221   111110        013678889999854210


Q ss_pred             --HHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc
Q 023553           82 --CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA  159 (280)
Q Consensus        82 --~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~  159 (280)
                        ....+++   ...+|++||+|+....      ..+   +......|+.+..++++.+..    .+..+++++||.+..
T Consensus      1050 l~~~~~~~l---~~~~d~iiH~Aa~~~~------~~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~v~ 1113 (1389)
T TIGR03443      1050 LSDEKWSDL---TNEVDVIIHNGALVHW------VYP---YSKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTSAL 1113 (1389)
T ss_pred             cCHHHHHHH---HhcCCEEEECCcEecC------ccC---HHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCeeec
Confidence              0111222   1379999999986532      122   344556799999998888754    233589999997553


Q ss_pred             cc-----------------C-----------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCC
Q 023553          160 IG-----------------G-----------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP  211 (280)
Q Consensus       160 ~~-----------------~-----------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~  211 (280)
                      ..                 .           .....|+.||.+.+.+++..+.    .|+.+..+.||.+..+.......
T Consensus      1114 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~ 1189 (1389)
T TIGR03443      1114 DTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATN 1189 (1389)
T ss_pred             CcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCC
Confidence            11                 0           0124699999999999876533    48999999999998774332221


Q ss_pred             cchhhhhhhhhhHHHHhhhcc---CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          212 EEERTEDAMVGFRNFVARNAN---MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ..............  ....+   ....++++++++++++.++........+.++++.++.
T Consensus      1190 ~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~ 1248 (1389)
T TIGR03443      1190 TDDFLLRMLKGCIQ--LGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP 1248 (1389)
T ss_pred             chhHHHHHHHHHHH--hCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC
Confidence            11111111000000  00001   1256888999999999998643222234567776653

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.29  E-value=2.3e-10  Score=98.89  Aligned_cols=211  Identities=18%  Similarity=0.098  Sum_probs=119.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEEE
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  100 (280)
                      +|||||+|.||..+++.|++.|++|++++|+.+......       ...+  .|+.. .       ...+.+.++|++||
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~--~~~~~-~-------~~~~~~~~~D~Vvh   63 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-------WEGY--KPWAP-L-------AESEALEGADAVIN   63 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-------ceee--ecccc-c-------chhhhcCCCCEEEE
Confidence            689999999999999999999999999999876543211       0011  12222 1       11233458999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC------------CCccc
Q 023553          101 NAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL------------GPHAY  168 (280)
Q Consensus       101 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~------------~~~~Y  168 (280)
                      +|+....    ....+.+.....+++|+.+...+++++...=  .+...+++.|+.. ..+..            ....|
T Consensus        64 ~a~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~i~~S~~~-~yg~~~~~~~~E~~~~~~~~~~  136 (292)
T TIGR01777        64 LAGEPIA----DKRWTEERKQEIRDSRIDTTRALVEAIAAAE--QKPKVFISASAVG-YYGTSEDRVFTEEDSPAGDDFL  136 (292)
T ss_pred             CCCCCcc----cccCCHHHHHHHHhcccHHHHHHHHHHHhcC--CCceEEEEeeeEE-EeCCCCCCCcCcccCCCCCChH
Confidence            9986432    1224445667788999999988888876531  1112344444432 12111            01112


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHH---hhhccCCCCCCCHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV---ARNANMQGTELTANDVAN  245 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~  245 (280)
                      ...+...+...+    .+...++.+..+.|+.+..+... ..+.  . .   .......   .........++.++|+++
T Consensus       137 ~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~-~~~~--~-~---~~~~~~~~~~~g~~~~~~~~i~v~Dva~  205 (292)
T TIGR01777       137 AELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGG-ALAK--M-L---PPFRLGLGGPLGSGRQWFSWIHIEDLVQ  205 (292)
T ss_pred             HHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcc-hhHH--H-H---HHHhcCcccccCCCCcccccEeHHHHHH
Confidence            222222222222    22335799999999999887421 1000  0 0   0000000   001111257899999999


Q ss_pred             HHHHhcCCCCCceeecEEEeCCCc
Q 023553          246 AVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++..++....  ..| ++++.++.
T Consensus       206 ~i~~~l~~~~--~~g-~~~~~~~~  226 (292)
T TIGR01777       206 LILFALENAS--ISG-PVNATAPE  226 (292)
T ss_pred             HHHHHhcCcc--cCC-ceEecCCC
Confidence            9999996432  233 56665543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.25  E-value=2.7e-10  Score=98.48  Aligned_cols=196  Identities=14%  Similarity=0.117  Sum_probs=117.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC-ccEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT-LDIM   98 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~-id~l   98 (280)
                      +++||||+|.+|+.++++|.+.|+.|.+..|+.++...        ..+..+.+|+.|++++...++.. +.+.+ +|.+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~--------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v   71 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG--------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAV   71 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC--------CCCccccccCCCHHHHHHHHhcc-cCcCCceeEE
Confidence            48999999999999999999999999999999775321        23445678999999998877543 22335 9999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      +++++....           ...            ..+.+++.+++.+-.+||++||.....+.       ..+...+.+
T Consensus        72 ~~~~~~~~~-----------~~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------~~~~~~~~~  121 (285)
T TIGR03649        72 YLVAPPIPD-----------LAP------------PMIKFIDFARSKGVRRFVLLSASIIEKGG-------PAMGQVHAH  121 (285)
T ss_pred             EEeCCCCCC-----------hhH------------HHHHHHHHHHHcCCCEEEEeeccccCCCC-------chHHHHHHH
Confidence            988763210           000            11233444444556799999986543221       122222222


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCce
Q 023553          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYI  258 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~  258 (280)
                      .+.      ..|+....+.|+++...+.............      .+..........+++++|+|+++..++....  .
T Consensus       122 l~~------~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~--~  187 (285)
T TIGR03649       122 LDS------LGGVEYTVLRPTWFMENFSEEFHVEAIRKEN------KIYSATGDGKIPFVSADDIARVAYRALTDKV--A  187 (285)
T ss_pred             HHh------ccCCCEEEEeccHHhhhhcccccccccccCC------eEEecCCCCccCcccHHHHHHHHHHHhcCCC--c
Confidence            211      1379999999998765442111110000000      0000000111468999999999999886432  2


Q ss_pred             eecEEEeCCC
Q 023553          259 SGTNLMVDGG  268 (280)
Q Consensus       259 ~G~~i~~dgG  268 (280)
                      .|..+.+.|+
T Consensus       188 ~~~~~~l~g~  197 (285)
T TIGR03649       188 PNTDYVVLGP  197 (285)
T ss_pred             CCCeEEeeCC
Confidence            3555556554

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.25  E-value=3.7e-10  Score=106.09  Aligned_cols=228  Identities=14%  Similarity=0.090  Sum_probs=141.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecCcch---HHHHHHHh------------CC-------CCCeEE
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA---KVCIADVQDNL---GQQVCQSL------------GG-------EPDTFF   70 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~---~Vi~~~r~~~~---~~~~~~~~------------~~-------~~~~~~   70 (280)
                      ++||+++||||+|.||+.+++.|++.+.   +|++..|....   .+.+.+++            .+       ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            6999999999999999999999998653   57888775422   11111111            01       246888


Q ss_pred             EecCCCCHH------HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhccc
Q 023553           71 CHCDVTKEE------DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP  144 (280)
Q Consensus        71 ~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~  144 (280)
                      +..|+++++      ....+.       ..+|++||+|+....     .    ++.+..+++|+.+..++++.+...   
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~-------~~vDiVIH~AA~v~f-----~----~~~~~a~~vNV~GT~nLLelA~~~---  257 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIA-------KEVDVIINSAANTTF-----D----ERYDVAIDINTRGPCHLMSFAKKC---  257 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHH-------hcCCEEEECcccccc-----c----cCHHHHHHHHHHHHHHHHHHHHHc---
Confidence            999999872      332222       279999999987532     1    346788999999999999887653   


Q ss_pred             CCCceEEEEccccccccC---------C----------------------------------------------------
Q 023553          145 QTKGTIISICSVAGAIGG---------L----------------------------------------------------  163 (280)
Q Consensus       145 ~~~g~iv~isS~~~~~~~---------~----------------------------------------------------  163 (280)
                      ....++|++||....-..         +                                                    
T Consensus       258 ~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g  337 (605)
T PLN02503        258 KKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLG  337 (605)
T ss_pred             CCCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcc
Confidence            122478888875432110         0                                                    


Q ss_pred             --------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHH-hh-----
Q 023553          164 --------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV-AR-----  229 (280)
Q Consensus       164 --------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~-----  229 (280)
                              -...|..+|+..|.+++..+     .++.+..+.|..|.+.+.......-+.. .......... +.     
T Consensus       338 ~~~~~~~~~pNtYt~TK~lAE~lV~~~~-----~~LPv~IvRPsiV~st~~eP~pGw~d~~-~~~~p~~~~~g~G~lr~~  411 (605)
T PLN02503        338 LERAKLYGWQDTYVFTKAMGEMVINSMR-----GDIPVVIIRPSVIESTWKDPFPGWMEGN-RMMDPIVLYYGKGQLTGF  411 (605)
T ss_pred             cchhhhCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEcCCEecccccCCccccccCc-cccchhhhheeccceeEE
Confidence                    00356667776666665322     3689999999999776544432221110 0000000010 01     


Q ss_pred             --hccCCCCCCCHHHHHHHHHHhcCC--CCCceeecEEEeCCC
Q 023553          230 --NANMQGTELTANDVANAVLFLASD--EARYISGTNLMVDGG  268 (280)
Q Consensus       230 --~~~~~~~~~~~~dva~~i~~l~s~--~~~~~~G~~i~~dgG  268 (280)
                        .....-.+++++.|+++++..+..  ......|.++++..+
T Consensus       412 ~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~  454 (605)
T PLN02503        412 LADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASS  454 (605)
T ss_pred             EeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCC
Confidence              011124678899999999877321  111236889999877

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.25  E-value=7.6e-11  Score=98.18  Aligned_cols=211  Identities=18%  Similarity=0.120  Sum_probs=145.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ..+.+++++||||+|.||+.||+.|..+|+.|++++.-................+..+..|+..+     ++.       
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~-------   90 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLK-------   90 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHH-------
Confidence            34688999999999999999999999999999999876665555444444445666666777655     233       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-------------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-------------  160 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-------------  160 (280)
                      .+|.++|.|+..+++..  .    ..-.+++.+|+.+.+..+..+..-     +.|+++.|+....-             
T Consensus        91 evD~IyhLAapasp~~y--~----~npvktIktN~igtln~lglakrv-----~aR~l~aSTseVYgdp~~hpq~e~ywg  159 (350)
T KOG1429|consen   91 EVDQIYHLAAPASPPHY--K----YNPVKTIKTNVIGTLNMLGLAKRV-----GARFLLASTSEVYGDPLVHPQVETYWG  159 (350)
T ss_pred             HhhhhhhhccCCCCccc--c----cCccceeeecchhhHHHHHHHHHh-----CceEEEeecccccCCcccCCCcccccc
Confidence            78889999998876322  1    123567889999998877766443     46888877754422             


Q ss_pred             ---cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh--------
Q 023553          161 ---GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR--------  229 (280)
Q Consensus       161 ---~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------  229 (280)
                         +.....+|.-.|.+.+.|+..+.++   .||-+-...+-.+..|...-.-+.      ..-.|.....+        
T Consensus       160 ~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgr------vvsnf~~q~lr~epltv~g  230 (350)
T KOG1429|consen  160 NVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGR------VVSNFIAQALRGEPLTVYG  230 (350)
T ss_pred             ccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCCh------hhHHHHHHHhcCCCeEEEc
Confidence               1124578999999999999888666   688888888877777764322110      00111111111        


Q ss_pred             hccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023553          230 NANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       230 ~~~~~~~~~~~~dva~~i~~l~s~~~~  256 (280)
                      ..-+.+.+...+|+.+.++.|+..+.+
T Consensus       231 ~G~qtRSF~yvsD~Vegll~Lm~s~~~  257 (350)
T KOG1429|consen  231 DGKQTRSFQYVSDLVEGLLRLMESDYR  257 (350)
T ss_pred             CCcceEEEEeHHHHHHHHHHHhcCCCc
Confidence            112346788999999999999965443

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.24  E-value=2.3e-10  Score=105.40  Aligned_cols=162  Identities=18%  Similarity=0.221  Sum_probs=118.7

Q ss_pred             CCcEEE----EEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           17 VGRVAL----ITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        17 ~~k~vl----ItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .|..++    |+||++|+|.++++.|...|+.|+.+.+...+..                  ..              +.
T Consensus        33 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~------------------~~--------------~~   80 (450)
T PRK08261         33 PGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA------------------AG--------------WG   80 (450)
T ss_pred             CCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccc------------------cC--------------cC
Confidence            445555    7888899999999999999999998866554110                  00              01


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      .+++.+++-+-..         .+.++        +.+.+.+++..++.|.  ..|+||+++|..+..   +...|+++|
T Consensus        81 ~~~~~~~~d~~~~---------~~~~~--------l~~~~~~~~~~l~~l~--~~griv~i~s~~~~~---~~~~~~~ak  138 (450)
T PRK08261         81 DRFGALVFDATGI---------TDPAD--------LKALYEFFHPVLRSLA--PCGRVVVLGRPPEAA---ADPAAAAAQ  138 (450)
T ss_pred             CcccEEEEECCCC---------CCHHH--------HHHHHHHHHHHHHhcc--CCCEEEEEccccccC---CchHHHHHH
Confidence            2444444332111         11122        2244466777888874  458999999987753   335699999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +++.+++++++.|+ +.+++++.|.|++                                     ..++++++++.|+++
T Consensus       139 aal~gl~rsla~E~-~~gi~v~~i~~~~-------------------------------------~~~~~~~~~~~~l~s  180 (450)
T PRK08261        139 RALEGFTRSLGKEL-RRGATAQLVYVAP-------------------------------------GAEAGLESTLRFFLS  180 (450)
T ss_pred             HHHHHHHHHHHHHh-hcCCEEEEEecCC-------------------------------------CCHHHHHHHHHHhcC
Confidence            99999999999999 7799999998874                                     145789999999999


Q ss_pred             CCCCceeecEEEeCCCcc
Q 023553          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      ....+++|+.+.++++..
T Consensus       181 ~~~a~~~g~~i~~~~~~~  198 (450)
T PRK08261        181 PRSAYVSGQVVRVGAADA  198 (450)
T ss_pred             CccCCccCcEEEecCCcc
Confidence            888999999999999875

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.22  E-value=7.5e-10  Score=106.84  Aligned_cols=142  Identities=17%  Similarity=0.120  Sum_probs=99.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +.+++|||||+|.||+++++.|.++|+.|..                       ...|++|.+.+.+.++..     ++|
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-----------------------~~~~l~d~~~v~~~i~~~-----~pd  430 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-----------------------GKGRLEDRSSLLADIRNV-----KPT  430 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe-----------------------eccccccHHHHHHHHHhh-----CCC
Confidence            4458999999999999999999999988731                       124678888776666543     899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-----------c----
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------G----  161 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-----------~----  161 (280)
                      +|||+|+....+  . .+...++..+.+++|+.++.++++++...     +.+++++||.....           +    
T Consensus       431 ~Vih~Aa~~~~~--~-~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-----g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~  502 (668)
T PLN02260        431 HVFNAAGVTGRP--N-VDWCESHKVETIRANVVGTLTLADVCREN-----GLLMMNFATGCIFEYDAKHPEGSGIGFKEE  502 (668)
T ss_pred             EEEECCcccCCC--C-CChHHhCHHHHHHHHhHHHHHHHHHHHHc-----CCeEEEEcccceecCCcccccccCCCCCcC
Confidence            999999976431  1 12334456788999999999999998763     23566676643210           1    


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEe
Q 023553          162 ---GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS  197 (280)
Q Consensus       162 ---~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~  197 (280)
                         .+....|+.||.+.+.+++.+..   ...+|+..+.
T Consensus       503 ~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        503 DKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             CCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence               11236899999999999987632   2345554444

>PLN00016 RNA-binding protein; Provisional

Probab=99.21  E-value=4.8e-10  Score=100.92  Aligned_cols=202  Identities=15%  Similarity=0.069  Sum_probs=124.0

Q ss_pred             ccCCcEEEEE----cCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHH-------HHhCCCCCeEEEecCCCCHHHHHH
Q 023553           15 RLVGRVALIT----GGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC-------QSLGGEPDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        15 ~l~~k~vlIt----Gas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~   83 (280)
                      ....++||||    ||+|.||+.+++.|+++|+.|+++.|+........       ..+. ...+.++.+|+.+   +.+
T Consensus        49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d---~~~  124 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKTVWGDPAD---VKS  124 (378)
T ss_pred             ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCceEEEecHHH---HHh
Confidence            3456889999    99999999999999999999999999875422111       1111 1236778888876   222


Q ss_pred             HHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC
Q 023553           84 AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL  163 (280)
Q Consensus        84 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~  163 (280)
                      ++.     ..++|++|++++..           .           .+...++++    +++.+-.++|++||........
T Consensus       125 ~~~-----~~~~d~Vi~~~~~~-----------~-----------~~~~~ll~a----a~~~gvkr~V~~SS~~vyg~~~  173 (378)
T PLN00016        125 KVA-----GAGFDVVYDNNGKD-----------L-----------DEVEPVADW----AKSPGLKQFLFCSSAGVYKKSD  173 (378)
T ss_pred             hhc-----cCCccEEEeCCCCC-----------H-----------HHHHHHHHH----HHHcCCCEEEEEccHhhcCCCC
Confidence            221     13799999987520           0           122233333    3334456899999976533211


Q ss_pred             C--------CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc----
Q 023553          164 G--------PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA----  231 (280)
Q Consensus       164 ~--------~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  231 (280)
                      .        ..++. +|...+.+.+       ..++.+..+.|+.+..+........ ..       +........    
T Consensus       174 ~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~-~~-------~~~~~~~~~i~~~  237 (378)
T PLN00016        174 EPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEE-WF-------FDRLVRGRPVPIP  237 (378)
T ss_pred             CCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHH-HH-------HHHHHcCCceeec
Confidence            1        11222 7887776653       2478999999999988753321100 00       001111110    


Q ss_pred             ---cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          232 ---NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       232 ---~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                         .....++.++|+|+++..++...  ...|+++++.|+.
T Consensus       238 g~g~~~~~~i~v~Dva~ai~~~l~~~--~~~~~~yni~~~~  276 (378)
T PLN00016        238 GSGIQLTQLGHVKDLASMFALVVGNP--KAAGQIFNIVSDR  276 (378)
T ss_pred             CCCCeeeceecHHHHHHHHHHHhcCc--cccCCEEEecCCC
Confidence               01135788999999999998542  3457889988764

>PRK12320 hypothetical protein; Provisional

Probab=99.17  E-value=3.8e-09  Score=100.65  Aligned_cols=189  Identities=13%  Similarity=0.092  Sum_probs=120.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      ++|||||+|.||+.+++.|.++|+.|++++|.....        ....+.++.+|+++.. +.+++       .++|++|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~--------~~~~ve~v~~Dl~d~~-l~~al-------~~~D~VI   65 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA--------LDPRVDYVCASLRNPV-LQELA-------GEADAVI   65 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc--------ccCCceEEEccCCCHH-HHHHh-------cCCCEEE
Confidence            699999999999999999999999999999865421        1135678899999873 33222       3799999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHH
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN  179 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  179 (280)
                      |.|+....  .            ...+|+.+..++++++..    .+ .++|++||..+.   +  ..|.    ..+.+.
T Consensus        66 HLAa~~~~--~------------~~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~~G~---~--~~~~----~aE~ll  117 (699)
T PRK12320         66 HLAPVDTS--A------------PGGVGITGLAHVANAAAR----AG-ARLLFVSQAAGR---P--ELYR----QAETLV  117 (699)
T ss_pred             EcCccCcc--c------------hhhHHHHHHHHHHHHHHH----cC-CeEEEEECCCCC---C--cccc----HHHHHH
Confidence            99986311  0            114788999888887754    22 489999987431   1  1232    122222


Q ss_pred             HHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCcee
Q 023553          180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYIS  259 (280)
Q Consensus       180 ~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~  259 (280)
                          ..   .++.+..+.|..+..+.......  .    .+..+.....+..+  -.++..+|++++++.+++..   .+
T Consensus       118 ----~~---~~~p~~ILR~~nVYGp~~~~~~~--r----~I~~~l~~~~~~~p--I~vIyVdDvv~alv~al~~~---~~  179 (699)
T PRK12320        118 ----ST---GWAPSLVIRIAPPVGRQLDWMVC--R----TVATLLRSKVSARP--IRVLHLDDLVRFLVLALNTD---RN  179 (699)
T ss_pred             ----Hh---cCCCEEEEeCceecCCCCcccHh--H----HHHHHHHHHHcCCc--eEEEEHHHHHHHHHHHHhCC---CC
Confidence                11   34778889999998873221100  0    00111100011111  12359999999999988642   13


Q ss_pred             ecEEEeCCCccc
Q 023553          260 GTNLMVDGGFTS  271 (280)
Q Consensus       260 G~~i~~dgG~~~  271 (280)
                      | ++++.||...
T Consensus       180 G-iyNIG~~~~~  190 (699)
T PRK12320        180 G-VVDLATPDTT  190 (699)
T ss_pred             C-EEEEeCCCee
Confidence            4 8999888543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.12  E-value=2.4e-10  Score=95.40  Aligned_cols=96  Identities=18%  Similarity=0.206  Sum_probs=76.5

Q ss_pred             cEEEEEcC-CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           19 RVALITGG-ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGa-s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .+=.||.. +||||+++|+.|+++|++|+++++... +       ....   ...||+++.+++.++++.+.+.++++|+
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l-------~~~~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDi   83 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L-------KPEP---HPNLSIREIETTKDLLITLKELVQEHDI   83 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c-------cccc---CCcceeecHHHHHHHHHHHHHHcCCCCE
Confidence            45566644 789999999999999999999876321 1       1001   1358999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhh
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDIN  127 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n  127 (280)
                      +|||||+...  .++.+.+.++|++++..|
T Consensus        84 LVnnAgv~d~--~~~~~~s~e~~~~~~~~~  111 (227)
T TIGR02114        84 LIHSMAVSDY--TPVYMTDLEQVQASDNLN  111 (227)
T ss_pred             EEECCEeccc--cchhhCCHHHHhhhcchh
Confidence            9999998654  678899999999886553

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.06  E-value=4.5e-09  Score=87.70  Aligned_cols=195  Identities=22%  Similarity=0.198  Sum_probs=113.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEEE
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  100 (280)
                      ++||||+|-||++++..|.+.|+.|+++.|+.........     ..       +..-+.    ++...+  .++|++||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----~~-------v~~~~~----~~~~~~--~~~DavIN   62 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----PN-------VTLWEG----LADALT--LGIDAVIN   62 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----cc-------ccccch----hhhccc--CCCCEEEE
Confidence            5899999999999999999999999999999886543211     00       001111    111111  27999999


Q ss_pred             CCCCCCCCCCCCCC-CCHHHHHHHhhhhhhhHHHHHHHHHHhccc-CCCceEEEEccccccccCCCCccchhhHH----H
Q 023553          101 NAGISGAPCPDIRE-ADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKH----A  174 (280)
Q Consensus       101 ~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~g~iv~isS~~~~~~~~~~~~Y~~sK~----a  174 (280)
                      .||..-.     .. ++.+.=+..++.-+..+    +.+.....+ ...+++..=+|.-|.++......|--...    .
T Consensus        63 LAG~~I~-----~rrWt~~~K~~i~~SRi~~T----~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~F  133 (297)
T COG1090          63 LAGEPIA-----ERRWTEKQKEEIRQSRINTT----EKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDF  133 (297)
T ss_pred             CCCCccc-----cccCCHHHHHHHHHHHhHHH----HHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCCh
Confidence            9996422     12 44444445544444444    444444432 23355555556667777665555544333    4


Q ss_pred             HHHHHHHHHHHH---CCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHH-hhhccC------CCCCCCHHHHH
Q 023553          175 VLGLNKNVAAEL---GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV-ARNANM------QGTELTANDVA  244 (280)
Q Consensus       175 l~~~~~~la~e~---~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~dva  244 (280)
                      +..+++.+-.+-   ...|+||..+.-|.|-.+-......           +...+ ......      --.|+..||++
T Consensus       134 la~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~-----------m~~~fk~glGG~~GsGrQ~~SWIhieD~v  202 (297)
T COG1090         134 LAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGK-----------MLPLFKLGLGGKLGSGRQWFSWIHIEDLV  202 (297)
T ss_pred             HHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhh-----------hcchhhhccCCccCCCCceeeeeeHHHHH
Confidence            445555443332   2348999999999886643211100           00111 111011      12578899999


Q ss_pred             HHHHHhcCC
Q 023553          245 NAVLFLASD  253 (280)
Q Consensus       245 ~~i~~l~s~  253 (280)
                      ++|.|++..
T Consensus       203 ~~I~fll~~  211 (297)
T COG1090         203 NAILFLLEN  211 (297)
T ss_pred             HHHHHHHhC
Confidence            999999954

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.04  E-value=1.4e-08  Score=88.59  Aligned_cols=164  Identities=15%  Similarity=0.149  Sum_probs=116.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcc---hHHHHHHHhC--------CCCCeEEEecCCCCH------HH
Q 023553           19 RVALITGGATGIGESTVRLFHKH-GAKVCIADVQDN---LGQQVCQSLG--------GEPDTFFCHCDVTKE------ED   80 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~---~~~~~~~~~~--------~~~~~~~~~~D~~~~------~~   80 (280)
                      +++++|||+|.||+.+++.|... .++|++.-|-+.   ..+.+.+...        ...++.++-.|++.+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999998876 568988777543   2222222221        136788888999843      33


Q ss_pred             HHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc
Q 023553           81 VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI  160 (280)
Q Consensus        81 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~  160 (280)
                      ..++.+       .+|.+|||++.....         ....+....|+.|...+++.+.-    .+...+.++||++...
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v---------~pYs~L~~~NVlGT~evlrLa~~----gk~Kp~~yVSsisv~~  140 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHV---------FPYSELRGANVLGTAEVLRLAAT----GKPKPLHYVSSISVGE  140 (382)
T ss_pred             HHHHhh-------hcceEEecchhhccc---------CcHHHhcCcchHhHHHHHHHHhc----CCCceeEEEeeeeecc
Confidence            333333       799999999876431         23567778999999887777643    2223499999987644


Q ss_pred             cCC--------------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceecccc
Q 023553          161 GGL--------------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA  206 (280)
Q Consensus       161 ~~~--------------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~  206 (280)
                      ...                    ..+.|+-||.+.+-+++....    .|+++..+.||++-.+-.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         141 TEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             ccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeeccCc
Confidence            211                    236899999999998876543    389999999999977654

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.91  E-value=7.6e-09  Score=100.04  Aligned_cols=179  Identities=16%  Similarity=0.167  Sum_probs=140.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcch--HHHH-HHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNL--GQQV-CQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~--~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .....|..+|+||-+|.|.+++++|.++|++ +++++|+--+  .+.. ...-+. ...+.+-..|++..+.++.++++.
T Consensus      1764 ~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s 1843 (2376)
T KOG1202|consen 1764 YCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEES 1843 (2376)
T ss_pred             hcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHh
Confidence            3457899999999999999999999999997 7888887432  2221 112222 245666678999999999999987


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      . +.+.+-.++|.|.+...  ..+++.+++.|++..+-.+.+.+++-+.-...--  .-..||.+||++.-.+..++..|
T Consensus      1844 ~-kl~~vGGiFnLA~VLRD--~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~--~LdyFv~FSSvscGRGN~GQtNY 1918 (2376)
T KOG1202|consen 1844 N-KLGPVGGIFNLAAVLRD--GLIENQTPKNFKDVAKPKYSGTINLDRVSREICP--ELDYFVVFSSVSCGRGNAGQTNY 1918 (2376)
T ss_pred             h-hcccccchhhHHHHHHh--hhhcccChhHHHhhhccceeeeeehhhhhhhhCc--ccceEEEEEeecccCCCCccccc
Confidence            5 45899999999999987  8999999999999999999999987776555421  12578999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCce
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAV  201 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v  201 (280)
                      +-+..+++.+++.=+.+    |..-.+|.-|.+
T Consensus      1919 G~aNS~MERiceqRr~~----GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1919 GLANSAMERICEQRRHE----GFPGTAIQWGAI 1947 (2376)
T ss_pred             chhhHHHHHHHHHhhhc----CCCcceeeeecc
Confidence            99999999999764333    444455555554

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.87  E-value=2.1e-08  Score=83.89  Aligned_cols=212  Identities=17%  Similarity=0.178  Sum_probs=139.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++.+|-++-|.||+|.+|+-++++|++.|-.|++-.|..+..-...+-+++-+.+.++..|+.|++++++.++      
T Consensus        56 RsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk------  129 (391)
T KOG2865|consen   56 RSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK------  129 (391)
T ss_pred             cccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHH------
Confidence            35578999999999999999999999999999999999877654444555566789999999999999998888      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                       +-+++||..|--.+    -.+.+++      ++|+.++-.+++.+..    .+--++|.+|+..+.  ....+-|=-+|
T Consensus       130 -~sNVVINLIGrd~e----Tknf~f~------Dvn~~~aerlAricke----~GVerfIhvS~Lgan--v~s~Sr~LrsK  192 (391)
T KOG2865|consen  130 -HSNVVINLIGRDYE----TKNFSFE------DVNVHIAERLARICKE----AGVERFIHVSCLGAN--VKSPSRMLRSK  192 (391)
T ss_pred             -hCcEEEEeeccccc----cCCcccc------cccchHHHHHHHHHHh----hChhheeehhhcccc--ccChHHHHHhh
Confidence             77899999986432    2233443      3555566555555433    344589999998754  33334555667


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHh--hhccC-------CCCCCCHHHH
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA--RNANM-------QGTELTANDV  243 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~dv  243 (280)
                      ++-+--++.   +++.    ...|.|--+.....        ...   ..+..+.+  +..++       ....+.+-||
T Consensus       193 ~~gE~aVrd---afPe----AtIirPa~iyG~eD--------rfl---n~ya~~~rk~~~~pL~~~GekT~K~PVyV~DV  254 (391)
T KOG2865|consen  193 AAGEEAVRD---AFPE----ATIIRPADIYGTED--------RFL---NYYASFWRKFGFLPLIGKGEKTVKQPVYVVDV  254 (391)
T ss_pred             hhhHHHHHh---hCCc----ceeechhhhcccch--------hHH---HHHHHHHHhcCceeeecCCcceeeccEEEehH
Confidence            766554432   3433    34456655433321        100   00111111  11111       1344567799


Q ss_pred             HHHHHHhcCCCCCceeecEEEeCC
Q 023553          244 ANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       244 a~~i~~l~s~~~~~~~G~~i~~dg  267 (280)
                      |.+|...+...  .-.|.++..-|
T Consensus       255 aa~IvnAvkDp--~s~Gktye~vG  276 (391)
T KOG2865|consen  255 AAAIVNAVKDP--DSMGKTYEFVG  276 (391)
T ss_pred             HHHHHHhccCc--cccCceeeecC
Confidence            99999999644  45788887755

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.79  E-value=1.3e-08  Score=85.28  Aligned_cols=209  Identities=15%  Similarity=0.147  Sum_probs=120.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEEE
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  100 (280)
                      |+|+||+|.+|+.+++.|.+.+++|.+..|+.....  .+.+... .+.++..|+.+++++.+.++       ++|.+|+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~--~~~l~~~-g~~vv~~d~~~~~~l~~al~-------g~d~v~~   70 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDR--AQQLQAL-GAEVVEADYDDPESLVAALK-------GVDAVFS   70 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHH--HHHHHHT-TTEEEES-TT-HHHHHHHHT-------TCSEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhh--hhhhhcc-cceEeecccCCHHHHHHHHc-------CCceEEe
Confidence            689999999999999999999999999999874321  1111111 34567999999998877766       9999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC--C--CccchhhHHHHH
Q 023553          101 NAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL--G--PHAYTGSKHAVL  176 (280)
Q Consensus       101 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~--~--~~~Y~~sK~al~  176 (280)
                      +.+...+       ..           +.....+++++...    +-.++|+ ||........  .  ...+-..|+.++
T Consensus        71 ~~~~~~~-------~~-----------~~~~~~li~Aa~~a----gVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie  127 (233)
T PF05368_consen   71 VTPPSHP-------SE-----------LEQQKNLIDAAKAA----GVKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIE  127 (233)
T ss_dssp             ESSCSCC-------CH-----------HHHHHHHHHHHHHH----T-SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHH
T ss_pred             ecCcchh-------hh-----------hhhhhhHHHhhhcc----ccceEEE-EEecccccccccccccchhhhhhhhhh
Confidence            8875421       11           11233345555442    2347764 5544433211  1  122334566665


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCC-CCHHHHHHHHHHhcCCCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE-LTANDVANAVLFLASDEA  255 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dva~~i~~l~s~~~  255 (280)
                      .+.+.       .++....|.||...........+........  ....+. ........+ .+++|+++++..++....
T Consensus       128 ~~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~Dvg~~va~il~~p~  197 (233)
T PF05368_consen  128 EYLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSK--DVVTLP-GPGNQKAVPVTDTRDVGRAVAAILLDPE  197 (233)
T ss_dssp             HHHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTS--SEEEEE-TTSTSEEEEEEHHHHHHHHHHHHHHSGG
T ss_pred             hhhhh-------ccccceeccccchhhhhhhhhcccccccccc--eEEEEc-cCCCccccccccHHHHHHHHHHHHcChH
Confidence            54433       3799999999987554433211100000000  000000 000000133 488999999999998755


Q ss_pred             CceeecEEEeCCCcccc
Q 023553          256 RYISGTNLMVDGGFTSV  272 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~~  272 (280)
                      ..-.|..+.+.|...-+
T Consensus       198 ~~~~~~~~~~~~~~~t~  214 (233)
T PF05368_consen  198 KHNNGKTIFLAGETLTY  214 (233)
T ss_dssp             GTTEEEEEEEGGGEEEH
T ss_pred             HhcCCEEEEeCCCCCCH
Confidence            44478888887755433

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.78  E-value=3.8e-08  Score=88.55  Aligned_cols=81  Identities=23%  Similarity=0.302  Sum_probs=63.0

Q ss_pred             cccCCcEEEEEcC----------------CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC
Q 023553           14 QRLVGRVALITGG----------------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK   77 (280)
Q Consensus        14 ~~l~~k~vlItGa----------------s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~   77 (280)
                      .+++||+++||||                +|++|+++|+.|+++|++|++++++.+ ..       ....  ...+|+++
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~~~~--~~~~dv~~  253 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------TPAG--VKRIDVES  253 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------CCCC--cEEEccCC
Confidence            3579999999999                455999999999999999999988753 11       1111  34579999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEECCCCCCC
Q 023553           78 EEDVCSAVDLTVEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        78 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~  107 (280)
                      .+++.+.++   +.++++|++|||||+...
T Consensus       254 ~~~~~~~v~---~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        254 AQEMLDAVL---AALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHHHH---HhcCCCCEEEEccccccc
Confidence            888765554   567899999999998654

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.75  E-value=1e-06  Score=80.89  Aligned_cols=245  Identities=17%  Similarity=0.102  Sum_probs=149.4

Q ss_pred             ccccccCCcEEEEEcCC-ChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHh----C-CCCCeEEEecCCCCHHHHHH
Q 023553           11 PAVQRLVGRVALITGGA-TGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSL----G-GEPDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas-~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~   83 (280)
                      |......+|++||||++ +.||-+++..|++.|++||++.++-. ...+.-+.+    . ......++..+..+-.++..
T Consensus       389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA  468 (866)
T COG4982         389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA  468 (866)
T ss_pred             CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence            45566889999999997 78999999999999999999876632 222222222    2 22456667899999999999


Q ss_pred             HHHHHHHHh--------------CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-Cc
Q 023553           84 AVDLTVEKF--------------GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KG  148 (280)
Q Consensus        84 ~~~~~~~~~--------------g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g  148 (280)
                      +++.|-+..              -.+|.+|=.|.+...  +.+.+..... +-.+++=+.....++-.+.+.-..++ ..
T Consensus       469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~--G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~  545 (866)
T COG4982         469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVS--GELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDT  545 (866)
T ss_pred             HHHHhccccccccCCcceecccccCcceeeecccCCcc--CccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCccc
Confidence            999986421              146888888877655  5565555422 22223333333333434333321221 23


Q ss_pred             eEEEEccccccccC-CCCccchhhHHHHHHHHHHHHHHH--CCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHH
Q 023553          149 TIISICSVAGAIGG-LGPHAYTGSKHAVLGLNKNVAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRN  225 (280)
Q Consensus       149 ~iv~isS~~~~~~~-~~~~~Y~~sK~al~~~~~~la~e~--~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  225 (280)
                      |.-.|-.++-..++ .+-+.|+-+|++++.++.-+..|-  +.+ +.+..-..||++....-..   .+.....++   +
T Consensus       546 R~hVVLPgSPNrG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~-vsl~~A~IGWtrGTGLMg~---Ndiiv~aiE---k  618 (866)
T COG4982         546 RLHVVLPGSPNRGMFGGDGAYGESKLALDAVVNRWHSESSWAAR-VSLAHALIGWTRGTGLMGH---NDIIVAAIE---K  618 (866)
T ss_pred             ceEEEecCCCCCCccCCCcchhhHHHHHHHHHHHhhccchhhHH-HHHhhhheeeeccccccCC---cchhHHHHH---H
Confidence            44444333333443 346799999999999988776663  332 5555556788865543211   111110000   0


Q ss_pred             HHhhhccCCCCCCCHHHHHHHHHHhcCCCCC---ceeecEEEeCCCcccc
Q 023553          226 FVARNANMQGTELTANDVANAVLFLASDEAR---YISGTNLMVDGGFTSV  272 (280)
Q Consensus       226 ~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~---~~~G~~i~~dgG~~~~  272 (280)
                      .  .     -+.-+++++|.-++-|++....   .-+--...++||+...
T Consensus       619 ~--G-----V~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~  661 (866)
T COG4982         619 A--G-----VRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGEV  661 (866)
T ss_pred             h--C-----ceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccccc
Confidence            0  0     2445889999999999975333   2244567788887654

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.71  E-value=1.3e-07  Score=77.13  Aligned_cols=83  Identities=18%  Similarity=0.316  Sum_probs=66.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++++++|+||+|++|+.+++.|++.|++|++++|+.++.++..+.+..........+|..+.+++.+.++       +
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~   97 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-------G   97 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-------c
Confidence            688999999999999999999999999999999999988888777766422233355678888887765554       7


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      .|++|++...
T Consensus        98 ~diVi~at~~  107 (194)
T cd01078          98 ADVVFAAGAA  107 (194)
T ss_pred             CCEEEECCCC
Confidence            8988887653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.66  E-value=1.3e-07  Score=81.89  Aligned_cols=83  Identities=20%  Similarity=0.356  Sum_probs=63.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc---chHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQD---NLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~---~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ++++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++.+++.+++... ....+..+|+++.+++...++   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence            467999999999 69999999999999997 99999986   5666666665432 334556688887766654433   


Q ss_pred             HHhCCccEEEECCCCC
Q 023553           90 EKFGTLDIMVNNAGIS  105 (280)
Q Consensus        90 ~~~g~id~li~~ag~~  105 (280)
                          ..|++||+..+.
T Consensus       199 ----~~DilINaTp~G  210 (289)
T PRK12548        199 ----SSDILVNATLVG  210 (289)
T ss_pred             ----cCCEEEEeCCCC
Confidence                679999997654

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.63  E-value=8.2e-07  Score=72.10  Aligned_cols=196  Identities=15%  Similarity=0.136  Sum_probs=118.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           19 RVALITGGATGIGESTVRLFHKHGA---KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~---~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      |+++|||++|=.|++|.+.+.++|.   +.+..+                    .-.+|+++..+.+.+++..     ++
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~--------------------skd~DLt~~a~t~~lF~~e-----kP   56 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG--------------------SKDADLTNLADTRALFESE-----KP   56 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEec--------------------cccccccchHHHHHHHhcc-----CC
Confidence            7899999999999999999998864   111111                    1137999999999888865     78


Q ss_pred             cEEEECCCCCCCCCCCCCCC--CHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-------------
Q 023553           96 DIMVNNAGISGAPCPDIREA--DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-------------  160 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-------------  160 (280)
                      -.+|+.|+...   +.+...  ..+-|...+++|    -+.++.+...    +--++++..|.+-.-             
T Consensus        57 thVIhlAAmVG---Glf~N~~ynldF~r~Nl~in----dNVlhsa~e~----gv~K~vsclStCIfPdkt~yPIdEtmvh  125 (315)
T KOG1431|consen   57 THVIHLAAMVG---GLFHNNTYNLDFIRKNLQIN----DNVLHSAHEH----GVKKVVSCLSTCIFPDKTSYPIDETMVH  125 (315)
T ss_pred             ceeeehHhhhc---chhhcCCCchHHHhhcceec----hhHHHHHHHh----chhhhhhhcceeecCCCCCCCCCHHHhc
Confidence            89999987764   223322  234444443333    2333444332    222344444433211             


Q ss_pred             ---cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHh---------
Q 023553          161 ---GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA---------  228 (280)
Q Consensus       161 ---~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------  228 (280)
                         +.|....|+.+|..+.-..+.++.++   |-...++.|-.+..|--.-.....--.-..+..+-+...         
T Consensus       126 ~gpphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~Vw  202 (315)
T KOG1431|consen  126 NGPPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVW  202 (315)
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEe
Confidence               12345679999998888889998885   456677778777766422111110000001111111111         


Q ss_pred             hhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          229 RNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       229 ~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      ....+++.++...|+|++++|++.+
T Consensus       203 GsG~PlRqFiys~DLA~l~i~vlr~  227 (315)
T KOG1431|consen  203 GSGSPLRQFIYSDDLADLFIWVLRE  227 (315)
T ss_pred             cCCChHHHHhhHhHHHHHHHHHHHh
Confidence            1223458899999999999999954

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.60  E-value=1.1e-07  Score=78.04  Aligned_cols=223  Identities=14%  Similarity=0.039  Sum_probs=144.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH-HHHHHh------CCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-QVCQSL------GGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~-~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ..|++||||-+|-=|.-++.-|+..|+.|..+-|+..... ..++.+      +..+.......|++|..++.+++..+ 
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-  105 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-  105 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc-
Confidence            3469999999999999999999999999998877654322 112222      11256777889999999999999887 


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc--------
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--------  161 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~--------  161 (280)
                          +++-+.|.|+....      ..+++-.+...++...|.+.++.++...-...+ -++ +-.|++.+.+        
T Consensus       106 ----kPtEiYnLaAQSHV------kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~-Vrf-YQAstSElyGkv~e~PQs  173 (376)
T KOG1372|consen  106 ----KPTEVYNLAAQSHV------KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK-VRF-YQASTSELYGKVQEIPQS  173 (376)
T ss_pred             ----Cchhhhhhhhhcce------EEEeecccceeeccchhhhhHHHHHHhcCcccc-eeE-EecccHhhcccccCCCcc
Confidence                78888888876543      355666677778889999999999988754332 233 3333333332        


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHC---CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCC
Q 023553          162 ----GLGPHAYTGSKHAVLGLNKNVAAELG---KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ  234 (280)
Q Consensus       162 ----~~~~~~Y~~sK~al~~~~~~la~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (280)
                          ..+.++|+++|.+-..++-.++..|.   -.||-+|.-+|.-=++-.+++....-.+. . .-....+........
T Consensus       174 E~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI-~-~gqqe~~~LGNL~a~  251 (376)
T KOG1372|consen  174 ETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKI-S-LGQQEKIELGNLSAL  251 (376)
T ss_pred             cCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHh-h-hcceeeEEecchhhh
Confidence                33568999999988777777777763   34666665555433332222211100000 0 000011111122234


Q ss_pred             CCCCCHHHHHHHHHHhcCCC
Q 023553          235 GTELTANDVANAVLFLASDE  254 (280)
Q Consensus       235 ~~~~~~~dva~~i~~l~s~~  254 (280)
                      +.|+-+.|-.++++.++.++
T Consensus       252 RDWGhA~dYVEAMW~mLQ~d  271 (376)
T KOG1372|consen  252 RDWGHAGDYVEAMWLMLQQD  271 (376)
T ss_pred             cccchhHHHHHHHHHHHhcC
Confidence            78999999999999888653

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.58  E-value=3.8e-07  Score=76.26  Aligned_cols=100  Identities=17%  Similarity=0.212  Sum_probs=68.7

Q ss_pred             cEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           19 RVALITGGATG-IGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGas~g-iG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .+-.||+.|+| +|+++|+.|+++|+.|++++|+....     .. ....+.++.++  +   ..++.+.+.+.++.+|+
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-----~~-~~~~v~~i~v~--s---~~~m~~~l~~~~~~~Di   84 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-----PE-PHPNLSIIEIE--N---VDDLLETLEPLVKDHDV   84 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-----CC-CCCCeEEEEEe--c---HHHHHHHHHHHhcCCCE
Confidence            46678866655 99999999999999999998764311     00 11234454432  2   23334444445568999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGV  131 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~  131 (280)
                      +||+||+...  .+....+.++|.+++++|.+..
T Consensus        85 vIh~AAvsd~--~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         85 LIHSMAVSDY--TPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             EEeCCccCCc--eehhhhhhhhhhhhhhhhhhhc
Confidence            9999998754  5566778899999988876654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.58  E-value=1.3e-07  Score=84.73  Aligned_cols=111  Identities=19%  Similarity=0.249  Sum_probs=74.8

Q ss_pred             ccCCcEEEEEcC---------------CCh-HHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH
Q 023553           15 RLVGRVALITGG---------------ATG-IGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE   78 (280)
Q Consensus        15 ~l~~k~vlItGa---------------s~g-iG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~   78 (280)
                      +++||+++||||               |+| +|.++|+.|..+|++|+++.++....        ....  ...+|+++.
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~--------~~~~--~~~~~v~~~  251 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL--------TPPG--VKSIKVSTA  251 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC--------CCCC--cEEEEeccH
Confidence            488999999999               566 99999999999999999988765421        1111  245799998


Q ss_pred             HHH-HHHHHHHHHHhCCccEEEECCCCCCCCCCCCC--CCCHHHHHHHhhhhhhhHHHHHHHHHH
Q 023553           79 EDV-CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR--EADLSEFEKVFDINVKGVFHGMKHAAR  140 (280)
Q Consensus        79 ~~~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~  140 (280)
                      +++ .+++++   .++++|++|+|||+...  .+..  +...+.....+..|+...--+++.+..
T Consensus       252 ~~~~~~~~~~---~~~~~D~~i~~Aavsd~--~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       252 EEMLEAALNE---LAKDFDIFISAAAVADF--KPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             HHHHHHHHHh---hcccCCEEEEccccccc--cccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence            888 444433   34689999999999754  2222  111222223455666666555555544

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.53  E-value=1.1e-05  Score=68.90  Aligned_cols=201  Identities=17%  Similarity=0.153  Sum_probs=122.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      +.++||||+|.+|+++++.|.+.|+.|.+..|+.+......      ..+.+...|+.++.++...++       ++|.+
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------~~v~~~~~d~~~~~~l~~a~~-------G~~~~   67 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------GGVEVVLGDLRDPKSLVAGAK-------GVDGV   67 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------CCcEEEEeccCCHhHHHHHhc-------cccEE
Confidence            36899999999999999999999999999999999877654      467788899999999877766       88888


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      ++..+... + ..          ..............+...     .+..+++.+|...+..  .....|..+|...+..
T Consensus        68 ~~i~~~~~-~-~~----------~~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~  128 (275)
T COG0702          68 LLISGLLD-G-SD----------AFRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAA  128 (275)
T ss_pred             EEEecccc-c-cc----------chhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHH
Confidence            88887653 1 11          011112223333333322     1234677777766543  3457889999988877


Q ss_pred             HHHHHHHHCCCCeEEEEEe-CCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCc
Q 023553          179 NKNVAAELGKYGIRVNCVS-PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~-pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~  257 (280)
                      .++.       |+.-..+. ++++.......  .....     ........... ..-..+..+|++..+...+..+.  
T Consensus       129 l~~s-------g~~~t~lr~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~-~~~~~i~~~d~a~~~~~~l~~~~--  191 (275)
T COG0702         129 LRSS-------GIPYTTLRRAAFYLGAGAAF--IEAAE-----AAGLPVIPRGI-GRLSPIAVDDVAEALAAALDAPA--  191 (275)
T ss_pred             HHhc-------CCCeEEEecCeeeeccchhH--HHHHH-----hhCCceecCCC-CceeeeEHHHHHHHHHHHhcCCc--
Confidence            7653       44433333 33332221110  00000     00000000000 01246788999999888876443  


Q ss_pred             eeecEEEeCCC
Q 023553          258 ISGTNLMVDGG  268 (280)
Q Consensus       258 ~~G~~i~~dgG  268 (280)
                      ..|..+.+.|-
T Consensus       192 ~~~~~~~l~g~  202 (275)
T COG0702         192 TAGRTYELAGP  202 (275)
T ss_pred             ccCcEEEccCC
Confidence            56677777664

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.49  E-value=1.1e-06  Score=79.63  Aligned_cols=217  Identities=12%  Similarity=0.138  Sum_probs=132.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecCcc---h---HHH-----HHHHh---CC--CCCeEEEecCCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA---KVCIADVQDN---L---GQQ-----VCQSL---GG--EPDTFFCHCDVT   76 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~---~Vi~~~r~~~---~---~~~-----~~~~~---~~--~~~~~~~~~D~~   76 (280)
                      ++||+++||||+|++|+-++..|...--   ++++.-|...   .   +..     +.+.+   ++  ..++..+..|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            7899999999999999999999998531   4666655421   1   111     11111   11  157888889988


Q ss_pred             CHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccc
Q 023553           77 KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV  156 (280)
Q Consensus        77 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~  156 (280)
                      +++---..-+.. .....+|++||.|+....         .|..+..+.+|.+|+..+++.+.....-   -.++++|..
T Consensus        90 ~~~LGis~~D~~-~l~~eV~ivih~AAtvrF---------de~l~~al~iNt~Gt~~~l~lak~~~~l---~~~vhVSTA  156 (467)
T KOG1221|consen   90 EPDLGISESDLR-TLADEVNIVIHSAATVRF---------DEPLDVALGINTRGTRNVLQLAKEMVKL---KALVHVSTA  156 (467)
T ss_pred             CcccCCChHHHH-HHHhcCCEEEEeeeeecc---------chhhhhhhhhhhHhHHHHHHHHHHhhhh---heEEEeehh
Confidence            764321111111 112389999999987533         2567889999999999998888776422   467788775


Q ss_pred             cccc----------cCC------------------------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEE
Q 023553          157 AGAI----------GGL------------------------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV  196 (280)
Q Consensus       157 ~~~~----------~~~------------------------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v  196 (280)
                      ...-          +.+                              ....|.-+|+-.+++...-+.     ++.+..+
T Consensus       157 y~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~-----~lPivIi  231 (467)
T KOG1221|consen  157 YSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE-----NLPLVII  231 (467)
T ss_pred             heecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc-----CCCeEEE
Confidence            5531          000                              124688888877777765443     4677888


Q ss_pred             eCCceeccccccCCCcchhhhhhhh-------h-hHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          197 SPYAVATGLALAHLPEEERTEDAMV-------G-FRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       197 ~pg~v~t~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      .|..|.+.......+.-+....+.-       + ...++. .......+++++.++++++..+
T Consensus       232 RPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~-d~~~~adiIPvD~vvN~~ia~~  293 (467)
T KOG1221|consen  232 RPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLV-DPKAVADIIPVDMVVNAMIASA  293 (467)
T ss_pred             cCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEE-ccccccceeeHHHHHHHHHHHH
Confidence            8888877765554442221111100       0 000000 1112367889999999987444

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.34  E-value=1.3e-05  Score=71.59  Aligned_cols=173  Identities=13%  Similarity=0.131  Sum_probs=105.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC-
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   93 (280)
                      ..+..+|+|+||+|++|+-+++.|.+.|..|.+.-|+.+..++.............+..|...+.++..   .+.+... 
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~---~~~~~~~~  152 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILK---KLVEAVPK  152 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhh---hhhhhccc
Confidence            357889999999999999999999999999999999988877765511111223344455555544422   2222211 


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ...+++.++|....  ..       +...-+++...|..++++++..    .+--++++++|+.+.........+..  .
T Consensus       153 ~~~~v~~~~ggrp~--~e-------d~~~p~~VD~~g~knlvdA~~~----aGvk~~vlv~si~~~~~~~~~~~~~~--~  217 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPE--EE-------DIVTPEKVDYEGTKNLVDACKK----AGVKRVVLVGSIGGTKFNQPPNILLL--N  217 (411)
T ss_pred             cceeEEecccCCCC--cc-------cCCCcceecHHHHHHHHHHHHH----hCCceEEEEEeecCcccCCCchhhhh--h
Confidence            34566666654322  11       2333445666688888888733    33458999999888766544333331  1


Q ss_pred             HHHHHH-HHHHHHHCCCCeEEEEEeCCceeccc
Q 023553          174 AVLGLN-KNVAAELGKYGIRVNCVSPYAVATGL  205 (280)
Q Consensus       174 al~~~~-~~la~e~~~~gi~v~~v~pg~v~t~~  205 (280)
                      ....-. +.....+...|+.-..|.||....+.
T Consensus       218 ~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  218 GLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDT  250 (411)
T ss_pred             hhhhHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence            111111 12223334567888888898776543

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.26  E-value=4.5e-05  Score=60.23  Aligned_cols=187  Identities=14%  Similarity=0.095  Sum_probs=122.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      +++.|.||+|-.|..|++...++|+.|.++.|++.+....       ..+...+.|+.|++++.+.+.       +.|++
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------~~~~i~q~Difd~~~~a~~l~-------g~DaV   66 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------QGVTILQKDIFDLTSLASDLA-------GHDAV   66 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------ccceeecccccChhhhHhhhc-------CCceE
Confidence            3678999999999999999999999999999999876543       245678899999998765555       99999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC---------Cccch
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG---------PHAYT  169 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~---------~~~Y~  169 (280)
                      |...|.+.+.+        +  ..        .....+++...++..+..|++.++....+.-.++         ...|-
T Consensus        67 IsA~~~~~~~~--------~--~~--------~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~  128 (211)
T COG2910          67 ISAFGAGASDN--------D--EL--------HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYK  128 (211)
T ss_pred             EEeccCCCCCh--------h--HH--------HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHH
Confidence            99998764310        0  11        1111455666665556789998887666543322         23455


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccC--CCcchhhhhhhhhhHHHHhhhccCCC-CCCCHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAH--LPEEERTEDAMVGFRNFVARNANMQG-TELTANDVANA  246 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~  246 (280)
                      ..-.+..-+.+.|+.+   .++.-.-++|-.+..|..+..  ....+.          ++..   -.| ..++.+|-|-+
T Consensus       129 ~~A~~~ae~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD~----------ll~n---~~G~SrIS~aDYAiA  192 (211)
T COG2910         129 PEALAQAEFLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGDQ----------LLVN---AKGESRISYADYAIA  192 (211)
T ss_pred             HHHHHHHHHHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccce----------EEEc---CCCceeeeHHHHHHH
Confidence            4444444455566555   447888889988777743321  000000          0000   002 56788999999


Q ss_pred             HHHhcCC
Q 023553          247 VLFLASD  253 (280)
Q Consensus       247 i~~l~s~  253 (280)
                      ++--+..
T Consensus       193 ~lDe~E~  199 (211)
T COG2910         193 VLDELEK  199 (211)
T ss_pred             HHHHHhc
Confidence            8887743

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.21  E-value=8.4e-06  Score=72.58  Aligned_cols=77  Identities=19%  Similarity=0.362  Sum_probs=66.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           19 RVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +.+||.|+ |++|+.+|..|++.| .+|++.+|+.+++.+.......  ++..+++|+.+.+.+.++++       +.|+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~--~v~~~~vD~~d~~al~~li~-------~~d~   71 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG--KVEALQVDAADVDALVALIK-------DFDL   71 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc--cceeEEecccChHHHHHHHh-------cCCE
Confidence            67899999 999999999999999 8899999999998887666543  77889999999999887777       4499


Q ss_pred             EEECCCCC
Q 023553           98 MVNNAGIS  105 (280)
Q Consensus        98 li~~ag~~  105 (280)
                      +||++...
T Consensus        72 VIn~~p~~   79 (389)
T COG1748          72 VINAAPPF   79 (389)
T ss_pred             EEEeCCch
Confidence            99998754

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.18  E-value=1.9e-05  Score=60.47  Aligned_cols=78  Identities=19%  Similarity=0.278  Sum_probs=59.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|+++|.|+ ||.|++++..|++.|++ |.++.|+.++.+++.+.+. ...+.++..  .+..   +.+       
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~-~~~~~~~~~--~~~~---~~~-------   73 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG-GVNIEAIPL--EDLE---EAL-------   73 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT-GCSEEEEEG--GGHC---HHH-------
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC-ccccceeeH--HHHH---HHH-------
Confidence            3789999999998 99999999999999998 9999999999999888873 223444433  3322   222       


Q ss_pred             CCccEEEECCCCC
Q 023553           93 GTLDIMVNNAGIS  105 (280)
Q Consensus        93 g~id~li~~ag~~  105 (280)
                      .+.|++|++.+..
T Consensus        74 ~~~DivI~aT~~~   86 (135)
T PF01488_consen   74 QEADIVINATPSG   86 (135)
T ss_dssp             HTESEEEE-SSTT
T ss_pred             hhCCeEEEecCCC
Confidence            3899999998764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.09  E-value=1.8e-05  Score=71.56  Aligned_cols=76  Identities=22%  Similarity=0.367  Sum_probs=59.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           21 ALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      |+|.|+ |.+|+.+++.|++.+-  +|++.+|+.+++++..+.+ ...++...++|+.|.+++.++++       +.|++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~-------~~dvV   71 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-LGDRVEAVQVDVNDPESLAELLR-------GCDVV   71 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHT-------TSSEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-cccceeEEEEecCCHHHHHHHHh-------cCCEE
Confidence            689999 9999999999999864  7999999999988887664 34578899999999999877776       67999


Q ss_pred             EECCCCC
Q 023553           99 VNNAGIS  105 (280)
Q Consensus        99 i~~ag~~  105 (280)
                      ||++|..
T Consensus        72 in~~gp~   78 (386)
T PF03435_consen   72 INCAGPF   78 (386)
T ss_dssp             EE-SSGG
T ss_pred             EECCccc
Confidence            9999754

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK09620 hypothetical protein; Provisional

Probab=98.09  E-value=7.9e-06  Score=68.19  Aligned_cols=84  Identities=17%  Similarity=0.134  Sum_probs=52.1

Q ss_pred             cCCcEEEEEcCC----------------ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHH
Q 023553           16 LVGRVALITGGA----------------TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE   79 (280)
Q Consensus        16 l~~k~vlItGas----------------~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   79 (280)
                      ++||+||||+|.                |.+|.++|+.|.++|+.|+++++.......   .......+..+..    ..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~~~~~~~~V~s----~~   73 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DINNQLELHPFEG----II   73 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccCCceeEEEEec----HH
Confidence            479999999886                999999999999999999988764321110   0000112222222    22


Q ss_pred             HHHHHHHHHHHHhCCccEEEECCCCCCC
Q 023553           80 DVCSAVDLTVEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        80 ~~~~~~~~~~~~~g~id~li~~ag~~~~  107 (280)
                      ++.+.+.++.+. .++|++||+|++...
T Consensus        74 d~~~~l~~~~~~-~~~D~VIH~AAvsD~  100 (229)
T PRK09620         74 DLQDKMKSIITH-EKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHHHHHhcc-cCCCEEEECccccce
Confidence            222223332221 278999999998654

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.08  E-value=1.8e-05  Score=72.96  Aligned_cols=77  Identities=22%  Similarity=0.381  Sum_probs=58.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+++|+|+++ +|.++|+.|++.|+.|++++++. +..++..+.+... .+.++.+|..+.            ..+
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~------------~~~   67 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL-GIELVLGEYPEE------------FLE   67 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCEEEeCCcchh------------Hhh
Confidence            57899999999888 99999999999999999999975 3444444444322 345667777751            225


Q ss_pred             CccEEEECCCCC
Q 023553           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~id~li~~ag~~  105 (280)
                      .+|++|+++|+.
T Consensus        68 ~~d~vv~~~g~~   79 (450)
T PRK14106         68 GVDLVVVSPGVP   79 (450)
T ss_pred             cCCEEEECCCCC
Confidence            899999999974

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.97  E-value=4.6e-05  Score=67.04  Aligned_cols=73  Identities=23%  Similarity=0.343  Sum_probs=55.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc-C-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKH-G-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~-g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++||||+|.||+.+|++|+++ | .+++++.|+.+.+..+.+++..        .|+.   ++       .+.+
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~--------~~i~---~l-------~~~l  213 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG--------GKIL---SL-------EEAL  213 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc--------ccHH---hH-------HHHH
Confidence            689999999999999999999999865 5 5799999998877766554321        1222   11       1334


Q ss_pred             CCccEEEECCCCC
Q 023553           93 GTLDIMVNNAGIS  105 (280)
Q Consensus        93 g~id~li~~ag~~  105 (280)
                      ...|++|+.++..
T Consensus       214 ~~aDiVv~~ts~~  226 (340)
T PRK14982        214 PEADIVVWVASMP  226 (340)
T ss_pred             ccCCEEEECCcCC
Confidence            5899999999875

>PLN00106 malate dehydrogenase

Probab=97.96  E-value=0.00017  Score=63.38  Aligned_cols=163  Identities=15%  Similarity=0.112  Sum_probs=100.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ..++|+|+|++|.+|..++..|+..+.  .+++++.++. ..+..+..+.......  .++++.++..+       .+..
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~-~g~a~Dl~~~~~~~~i--~~~~~~~d~~~-------~l~~   86 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT-PGVAADVSHINTPAQV--RGFLGDDQLGD-------ALKG   86 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC-CeeEchhhhCCcCceE--EEEeCCCCHHH-------HcCC
Confidence            457999999999999999999997654  6999998772 2212222121122222  13222222222       2248


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-------------cc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-------------IG  161 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-------------~~  161 (280)
                      .|++|+.||....+     .   .++.+.+..|+.....+.+.+.++    ...++++++|-...             .+
T Consensus        87 aDiVVitAG~~~~~-----g---~~R~dll~~N~~i~~~i~~~i~~~----~p~aivivvSNPvD~~~~i~t~~~~~~s~  154 (323)
T PLN00106         87 ADLVIIPAGVPRKP-----G---MTRDDLFNINAGIVKTLCEAVAKH----CPNALVNIISNPVNSTVPIAAEVLKKAGV  154 (323)
T ss_pred             CCEEEEeCCCCCCC-----C---CCHHHHHHHHHHHHHHHHHHHHHH----CCCeEEEEeCCCccccHHHHHHHHHHcCC
Confidence            99999999985431     1   336677888887766666665554    33456656554442             13


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCce
Q 023553          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAV  201 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v  201 (280)
                      .+....|+.++.-...|-..+++++.-.-..|.+...|--
T Consensus       155 ~p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~~ViGeH  194 (323)
T PLN00106        155 YDPKKLFGVTTLDVVRANTFVAEKKGLDPADVDVPVVGGH  194 (323)
T ss_pred             CCcceEEEEecchHHHHHHHHHHHhCCChhheEEEEEEeC
Confidence            4556789999877778888999997543333444444433

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.81  E-value=0.00024  Score=61.70  Aligned_cols=79  Identities=20%  Similarity=0.308  Sum_probs=54.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|++++|+|+++++|.++++.+...|+.|++++++.+..+.+ ..+.  .+.   .+|..+.+....+.+...  .+++|
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--~~~---~~~~~~~~~~~~~~~~~~--~~~~d  215 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQAG--ADA---VFNYRAEDLADRILAATA--GQGVD  215 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC--CCE---EEeCCCcCHHHHHHHHcC--CCceE
Confidence            689999999999999999999999999999999988766555 3232  111   134444443333322221  13799


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      .+++++|
T Consensus       216 ~vi~~~~  222 (325)
T cd08253         216 VIIEVLA  222 (325)
T ss_pred             EEEECCc
Confidence            9999886

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.81  E-value=0.00052  Score=60.24  Aligned_cols=150  Identities=18%  Similarity=0.106  Sum_probs=90.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      -++.++++|+|++|.+|..++..|+..+  ..++++++... ..+..+..+......  ..+.+++.+..+.+       
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~-~g~a~Dl~~~~~~~~--v~~~td~~~~~~~l-------   74 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGA-PGVAADLSHIDTPAK--VTGYADGELWEKAL-------   74 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCC-cccccchhhcCcCce--EEEecCCCchHHHh-------
Confidence            4678899999999999999999999654  57999998322 121222222112222  23444433221122       


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc-------------c
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-------------A  159 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~-------------~  159 (280)
                      ...|++|+++|....+        .+++.+.+..|+...-.+.+.+.+    .+-.++++++|-..             .
T Consensus        75 ~gaDvVVitaG~~~~~--------~~tR~dll~~N~~i~~~i~~~i~~----~~~~~iviv~SNPvdv~~~~~~~~~~~~  142 (321)
T PTZ00325         75 RGADLVLICAGVPRKP--------GMTRDDLFNTNAPIVRDLVAAVAS----SAPKAIVGIVSNPVNSTVPIAAETLKKA  142 (321)
T ss_pred             CCCCEEEECCCCCCCC--------CCCHHHHHHHHHHHHHHHHHHHHH----HCCCeEEEEecCcHHHHHHHHHhhhhhc
Confidence            3899999999975321        123566788888776665555544    44456777776332             2


Q ss_pred             ccCCCCccchhhHHHHHHHHHHHHHHH
Q 023553          160 IGGLGPHAYTGSKHAVLGLNKNVAAEL  186 (280)
Q Consensus       160 ~~~~~~~~Y~~sK~al~~~~~~la~e~  186 (280)
                      .+.|....|+.+-.=-..|-..+++.+
T Consensus       143 sg~p~~~viG~g~LDs~R~r~~la~~l  169 (321)
T PTZ00325        143 GVYDPRKLFGVTTLDVVRARKFVAEAL  169 (321)
T ss_pred             cCCChhheeechhHHHHHHHHHHHHHh
Confidence            234455678876322334556677775

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.79  E-value=0.00019  Score=61.90  Aligned_cols=76  Identities=18%  Similarity=0.373  Sum_probs=55.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+++|+|+ ||+|++++..|++.| .+|++++|+.++.+++.+.+.....+.+   +.    +.       .+...
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~---~~----~~-------~~~~~  184 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL---DL----EL-------QEELA  184 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee---cc----cc-------hhccc
Confidence            578999999997 899999999999999 6899999999888877776542211111   11    00       11124


Q ss_pred             CccEEEECCCCC
Q 023553           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~id~li~~ag~~  105 (280)
                      ..|++||+....
T Consensus       185 ~~DivInaTp~g  196 (278)
T PRK00258        185 DFDLIINATSAG  196 (278)
T ss_pred             cCCEEEECCcCC
Confidence            789999998654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.76  E-value=0.0007  Score=73.65  Aligned_cols=180  Identities=12%  Similarity=0.099  Sum_probs=116.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+.++.++|++.+++++.+++..|.++|+.|+++...... ......+.  ..+..+...-.+..++..+++.+....+.
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1828 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVV-SHSASPLA--SAIASVTLGTIDDTSIEAVIKDIEEKTAQ 1828 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccc-cccccccc--cccccccccccchHHHHHHHHhhhccccc
Confidence            3568899999889999999999999999999887533221 00000011  11112234445567777777777776788


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc------
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY------  168 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y------  168 (280)
                      ++.+||..+............   .....-...+...+.+.|.+.+.+...+.+.++.++...|..+..+....      
T Consensus      1829 ~~g~i~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~ 1905 (2582)
T TIGR02813      1829 IDGFIHLQPQHKSVADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQV 1905 (2582)
T ss_pred             cceEEEecccccccccccccc---ccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCcccccccccc
Confidence            999999877542100111111   11111224455567778887776655566789999988877665332221      


Q ss_pred             --hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCc
Q 023553          169 --TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA  200 (280)
Q Consensus       169 --~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~  200 (280)
                        ....+++.+|+|++++||....+|...+.|..
T Consensus      1906 ~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813      1906 KAELNQAALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred             ccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence              23589999999999999998778888887753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.76  E-value=8.2e-05  Score=64.52  Aligned_cols=79  Identities=18%  Similarity=0.216  Sum_probs=66.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHH----cCCeEEEEecCcchHHHHHHHhCCC-----CCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHK----HGAKVCIADVQDNLGQQVCQSLGGE-----PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~----~g~~Vi~~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      -++|.||||.-|.-+++.+..    .+.+..+.+|+++++++..+.+...     .....+.||.+|++++.+++.    
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak----   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK----   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence            378999999999999999999    7889999999999999888776431     233377899999999998888    


Q ss_pred             HhCCccEEEECCCCC
Q 023553           91 KFGTLDIMVNNAGIS  105 (280)
Q Consensus        91 ~~g~id~li~~ag~~  105 (280)
                         +-.+++|++|..
T Consensus        83 ---~~~vivN~vGPy   94 (423)
T KOG2733|consen   83 ---QARVIVNCVGPY   94 (423)
T ss_pred             ---hhEEEEeccccc
Confidence               456899999865

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.74  E-value=0.00019  Score=58.96  Aligned_cols=162  Identities=19%  Similarity=0.237  Sum_probs=104.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHc-CCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKH-GAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~-g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+-+..++||||+-|-+|..+|..|... |-. |++.+-..+...     .-..+  -++..|+.|..++++++-.    
T Consensus        40 ~~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-----V~~~G--PyIy~DILD~K~L~eIVVn----  108 (366)
T KOG2774|consen   40 QTQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-----VTDVG--PYIYLDILDQKSLEEIVVN----  108 (366)
T ss_pred             ccCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-----hcccC--CchhhhhhccccHHHhhcc----
Confidence            3456789999999999999999999875 654 665544333211     11112  2455788888776655442    


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-------CC-
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-------GL-  163 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-------~~-  163 (280)
                       .+||-+||-.+..+.       ......-...++|+.|.-++++.+..+-      .-+++-|+-|-++       +| 
T Consensus       109 -~RIdWL~HfSALLSA-------vGE~NVpLA~~VNI~GvHNil~vAa~~k------L~iFVPSTIGAFGPtSPRNPTPd  174 (366)
T KOG2774|consen  109 -KRIDWLVHFSALLSA-------VGETNVPLALQVNIRGVHNILQVAAKHK------LKVFVPSTIGAFGPTSPRNPTPD  174 (366)
T ss_pred             -cccceeeeHHHHHHH-------hcccCCceeeeecchhhhHHHHHHHHcC------eeEeecccccccCCCCCCCCCCC
Confidence             389999998665432       2222344567899999999888887752      2345555444333       22 


Q ss_pred             -----CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEE-eCCceec
Q 023553          164 -----GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV-SPYAVAT  203 (280)
Q Consensus       164 -----~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v-~pg~v~t  203 (280)
                           +...|+.||.-.+-+-+.+...   +|+.+-++ .||.+..
T Consensus       175 ltIQRPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~is~  217 (366)
T KOG2774|consen  175 LTIQRPRTIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGIISA  217 (366)
T ss_pred             eeeecCceeechhHHHHHHHHHHHHhh---cCccceecccCccccc
Confidence                 3468999999888888777555   45544444 4555533

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.67  E-value=0.00026  Score=60.83  Aligned_cols=75  Identities=15%  Similarity=0.216  Sum_probs=55.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .++|+++|+|+ ||+|++++..|++.|+.|.+++|+.++.+++.+.+...+.......|     +.         .....
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-----~~---------~~~~~  179 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD-----EL---------PLHRV  179 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh-----hh---------cccCc
Confidence            46899999999 69999999999999999999999988887777766432222222111     10         12478


Q ss_pred             cEEEECCCCC
Q 023553           96 DIMVNNAGIS  105 (280)
Q Consensus        96 d~li~~ag~~  105 (280)
                      |++||+.+..
T Consensus       180 DivInatp~g  189 (270)
T TIGR00507       180 DLIINATSAG  189 (270)
T ss_pred             cEEEECCCCC
Confidence            9999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.64  E-value=0.00031  Score=61.89  Aligned_cols=115  Identities=18%  Similarity=0.204  Sum_probs=65.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC-------CeEEEEecCcch--HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHG-------AKVCIADVQDNL--GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g-------~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++||||+|.+|..++..|+..+       ..|+++++++..  ++.....+...  ......|+....+.       .+
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~--~~~~~~~~~~~~~~-------~~   74 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC--AFPLLKSVVATTDP-------EE   74 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc--cccccCCceecCCH-------HH
Confidence            58999999999999999999844       579999996532  22111011000  00111133222221       22


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC--CCceEEEEcc
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ--TKGTIISICS  155 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~g~iv~isS  155 (280)
                      .+...|++|+.||....+     ..+.   .+.++.|+.    +++.+.+.+.+.  .++.++.+|.
T Consensus        75 ~l~~aDiVI~tAG~~~~~-----~~~R---~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          75 AFKDVDVAILVGAMPRKE-----GMER---KDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             HhCCCCEEEEeCCcCCCC-----CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecC
Confidence            234899999999986431     2333   344555554    344555555444  2567777664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.63  E-value=0.0003  Score=54.90  Aligned_cols=76  Identities=18%  Similarity=0.322  Sum_probs=55.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++++++|+|+ +++|+.+++.|++.| ..|.+++|+.+..++..+.+....    +..+..+.+++          ..
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~----------~~   80 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG----IAIAYLDLEEL----------LA   80 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc----cceeecchhhc----------cc
Confidence            467899999998 899999999999996 789999999888777666554211    12233333322          24


Q ss_pred             CccEEEECCCCC
Q 023553           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~id~li~~ag~~  105 (280)
                      ..|++|++....
T Consensus        81 ~~Dvvi~~~~~~   92 (155)
T cd01065          81 EADLIINTTPVG   92 (155)
T ss_pred             cCCEEEeCcCCC
Confidence            899999998654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.63  E-value=0.00042  Score=55.84  Aligned_cols=79  Identities=23%  Similarity=0.328  Sum_probs=48.7

Q ss_pred             cCCcEEEEEcC----------------CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHH
Q 023553           16 LVGRVALITGG----------------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE   79 (280)
Q Consensus        16 l~~k~vlItGa----------------s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   79 (280)
                      |+||+||||+|                ||..|.++|+.+...|+.|+++..... ...       ...+..+  ++.+.+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~-------p~~~~~i--~v~sa~   70 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP-------PPGVKVI--RVESAE   70 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS------------TTEEEE--E-SSHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc-------cccceEE--Eecchh
Confidence            57899999965                358999999999999999999887742 110       1234444  344555


Q ss_pred             HHHHHHHHHHHHhCCccEEEECCCCCCC
Q 023553           80 DVCSAVDLTVEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        80 ~~~~~~~~~~~~~g~id~li~~ag~~~~  107 (280)
                      ++   .+.+.+.+..-|++|++|++...
T Consensus        71 em---~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   71 EM---LEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             HH---HHHHHHHGGGGSEEEE-SB--SE
T ss_pred             hh---hhhhccccCcceeEEEecchhhe
Confidence            55   44555555566999999998754

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.61  E-value=0.0014  Score=57.54  Aligned_cols=80  Identities=25%  Similarity=0.419  Sum_probs=57.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .++++++|+|+++++|.++++.+...|++|++++++++..+.+ ....  ..   ...|..+.+....+.+....  +++
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~--~~---~~~~~~~~~~~~~~~~~~~~--~~~  236 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELG--AD---YVIDYRKEDFVREVRELTGK--RGV  236 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC--CC---eEEecCChHHHHHHHHHhCC--CCC
Confidence            3688999999999999999999999999999999888766554 2222  11   12355555554444433221  379


Q ss_pred             cEEEECCC
Q 023553           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |++++++|
T Consensus       237 d~~i~~~g  244 (342)
T cd08266         237 DVVVEHVG  244 (342)
T ss_pred             cEEEECCc
Confidence            99999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.57  E-value=0.00028  Score=65.01  Aligned_cols=80  Identities=26%  Similarity=0.313  Sum_probs=52.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++|+|+++ +|.++|+.|++.|++|++.+++........+.+...+ +.+...+  +...+   ..      ..
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g-~~~~~~~--~~~~~---~~------~~   68 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEG-IKVICGS--HPLEL---LD------ED   68 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcC-CEEEeCC--CCHHH---hc------Cc
Confidence            46899999999986 9999999999999999999987543333323332211 2222221  11111   11      14


Q ss_pred             ccEEEECCCCCCC
Q 023553           95 LDIMVNNAGISGA  107 (280)
Q Consensus        95 id~li~~ag~~~~  107 (280)
                      +|.+|+++|+...
T Consensus        69 ~d~vV~s~gi~~~   81 (447)
T PRK02472         69 FDLMVKNPGIPYT   81 (447)
T ss_pred             CCEEEECCCCCCC
Confidence            8999999998643

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.50  E-value=0.00087  Score=52.77  Aligned_cols=163  Identities=10%  Similarity=0.027  Sum_probs=102.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+++.++|.||++-.|..+.+++++.+-  +|+++.|+.......      ...+.....|.+..++.   ++    .+
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------~k~v~q~~vDf~Kl~~~---a~----~~   81 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------DKVVAQVEVDFSKLSQL---AT----NE   81 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------cceeeeEEechHHHHHH---Hh----hh
Confidence            35788999999999999999999999874  699999885332111      11233344565544332   33    33


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ..+|+++|+-|..... ......-.        +.=.-.+.+++++    ++.+-..|+++||..+...  ....|--.|
T Consensus        82 qg~dV~FcaLgTTRgk-aGadgfyk--------vDhDyvl~~A~~A----Ke~Gck~fvLvSS~GAd~s--SrFlY~k~K  146 (238)
T KOG4039|consen   82 QGPDVLFCALGTTRGK-AGADGFYK--------VDHDYVLQLAQAA----KEKGCKTFVLVSSAGADPS--SRFLYMKMK  146 (238)
T ss_pred             cCCceEEEeecccccc-cccCceEe--------echHHHHHHHHHH----HhCCCeEEEEEeccCCCcc--cceeeeecc
Confidence            5999999998876431 11111111        1111122333333    2345568999999877644  346788888


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP  211 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~  211 (280)
                      .-++.=+..|--      -++..+.||++..+.......
T Consensus       147 GEvE~~v~eL~F------~~~~i~RPG~ll~~R~esr~g  179 (238)
T KOG4039|consen  147 GEVERDVIELDF------KHIIILRPGPLLGERTESRQG  179 (238)
T ss_pred             chhhhhhhhccc------cEEEEecCcceeccccccccc
Confidence            887766654432      278889999998887655443

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.48  E-value=0.0015  Score=58.62  Aligned_cols=77  Identities=22%  Similarity=0.308  Sum_probs=55.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      +.+++++|.|+ |.+|+..++.+...|++|++++|+.+.++.+......     .+..+..+.+.+.+.+       ...
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~-----~v~~~~~~~~~l~~~l-------~~a  231 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG-----RIHTRYSNAYEIEDAV-------KRA  231 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc-----eeEeccCCHHHHHHHH-------ccC
Confidence            56788999987 7899999999999999999999998877665544331     1223445555443332       378


Q ss_pred             cEEEECCCCC
Q 023553           96 DIMVNNAGIS  105 (280)
Q Consensus        96 d~li~~ag~~  105 (280)
                      |++|+++++.
T Consensus       232 DvVI~a~~~~  241 (370)
T TIGR00518       232 DLLIGAVLIP  241 (370)
T ss_pred             CEEEEccccC
Confidence            9999998764

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.43  E-value=0.00084  Score=63.10  Aligned_cols=48  Identities=21%  Similarity=0.399  Sum_probs=42.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   62 (280)
                      .++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+++.+.+
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            3578999999999 59999999999999999999999988887776655

>PRK06849 hypothetical protein; Provisional

Probab=97.42  E-value=0.0018  Score=58.63  Aligned_cols=83  Identities=18%  Similarity=0.242  Sum_probs=56.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +.|+|||||++..+|..+++.|.++|++|++++.+........+...   .+..+...-.+++...+.+.++.++. ++|
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d---~~~~~p~p~~d~~~~~~~L~~i~~~~-~id   78 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD---GFYTIPSPRWDPDAYIQALLSIVQRE-NID   78 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh---heEEeCCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            46899999999999999999999999999999988655432222221   22222222334444444444555443 699


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|-...
T Consensus        79 ~vIP~~e   85 (389)
T PRK06849         79 LLIPTCE   85 (389)
T ss_pred             EEEECCh
Confidence            9998775

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.39  E-value=0.0022  Score=56.25  Aligned_cols=73  Identities=15%  Similarity=0.267  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|++++|+|++ |+|...++.....|++|+.++|++++++...+.-.   + .++  |.++++....+-+       ..|
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGA---d-~~i--~~~~~~~~~~~~~-------~~d  231 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGA---D-HVI--NSSDSDALEAVKE-------IAD  231 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCC---c-EEE--EcCCchhhHHhHh-------hCc
Confidence            69999999999 99999999888899999999999998876654322   2 222  3334444332222       399


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|..++
T Consensus       232 ~ii~tv~  238 (339)
T COG1064         232 AIIDTVG  238 (339)
T ss_pred             EEEECCC
Confidence            9999997

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.36  E-value=0.00093  Score=58.97  Aligned_cols=78  Identities=23%  Similarity=0.403  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC--C
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG--T   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~   94 (280)
                      .|+++||+||+||+|...++.....|+.++++..+.++.+ .++.+...   +.  .|..+++    +.+++++..+  +
T Consensus       142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd---~v--i~y~~~~----~~~~v~~~t~g~g  211 (326)
T COG0604         142 PGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGAD---HV--INYREED----FVEQVRELTGGKG  211 (326)
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCC---EE--EcCCccc----HHHHHHHHcCCCC
Confidence            3899999999999999999999999988777777777666 55555421   11  1333333    3455555443  5


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|+++...|.
T Consensus       212 vDvv~D~vG~  221 (326)
T COG0604         212 VDVVLDTVGG  221 (326)
T ss_pred             ceEEEECCCH
Confidence            9999999984

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.33  E-value=0.00048  Score=56.39  Aligned_cols=49  Identities=18%  Similarity=0.350  Sum_probs=42.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   62 (280)
                      ..+++||+++|.|.+ .+|+.+++.|.+.|++|++.+++.+..++..+.+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            456899999999996 8999999999999999999999988777665543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.25  E-value=0.0084  Score=55.83  Aligned_cols=111  Identities=22%  Similarity=0.277  Sum_probs=71.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH-------------HHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE-------------EDVC   82 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------------~~~~   82 (280)
                      ..+.+|+|+|+ |.+|...+..+...|+.|++++++++.++...+ +.  .+  ++..|..+.             +..+
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lG--A~--~v~i~~~e~~~~~~gya~~~s~~~~~  236 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MG--AE--FLELDFEEEGGSGDGYAKVMSEEFIK  236 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC--Ce--EEEeccccccccccchhhhcchhHHH
Confidence            46889999986 689999999999999999999999988776544 43  22  222222221             1112


Q ss_pred             HHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           83 SAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        83 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                      +..+.+.+..++.|++|.++|+...+                     .+..+.+..+..|  +++|.|+.++.
T Consensus       237 ~~~~~~~~~~~gaDVVIetag~pg~~---------------------aP~lit~~~v~~m--kpGgvIVdvg~  286 (509)
T PRK09424        237 AEMALFAEQAKEVDIIITTALIPGKP---------------------APKLITAEMVASM--KPGSVIVDLAA  286 (509)
T ss_pred             HHHHHHHhccCCCCEEEECCCCCccc---------------------CcchHHHHHHHhc--CCCCEEEEEcc
Confidence            22222233335799999999985431                     1223346667776  35678888875

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.23  E-value=0.0018  Score=55.94  Aligned_cols=79  Identities=10%  Similarity=0.091  Sum_probs=55.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++++.+.....+..    +...+++       .+...
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~----~~~~~~~-------~~~~~  189 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR----LEGDSGG-------LAIEK  189 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee----ccchhhh-------hhccc
Confidence            467899999976 8999999999999997 599999999988888776543222111    1111111       11124


Q ss_pred             CccEEEECCCCC
Q 023553           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~id~li~~ag~~  105 (280)
                      ..|++||+....
T Consensus       190 ~~DiVInaTp~g  201 (282)
T TIGR01809       190 AAEVLVSTVPAD  201 (282)
T ss_pred             CCCEEEECCCCC
Confidence            789999998653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.20  E-value=0.0087  Score=55.64  Aligned_cols=84  Identities=23%  Similarity=0.289  Sum_probs=59.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCC-------------CHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVT-------------KEEDVC   82 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-------------~~~~~~   82 (280)
                      ..+.+++|.|+ |.+|...+..+...|+.|++++++.+.++.... +.    ..++..|..             +.+..+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lG----a~~v~v~~~e~g~~~~gYa~~~s~~~~~  235 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MG----AEFLELDFKEEGGSGDGYAKVMSEEFIA  235 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC----CeEEeccccccccccccceeecCHHHHH
Confidence            45789999995 999999999999999999999999887665433 32    123333431             234444


Q ss_pred             HHHHHHHHHhCCccEEEECCCCC
Q 023553           83 SAVDLTVEKFGTLDIMVNNAGIS  105 (280)
Q Consensus        83 ~~~~~~~~~~g~id~li~~ag~~  105 (280)
                      ...+...++..+.|++|+++-+.
T Consensus       236 ~~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       236 AEMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHHhCCCCEEEECcccC
Confidence            44455555667899999999554

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.16  E-value=0.0021  Score=54.87  Aligned_cols=107  Identities=14%  Similarity=0.153  Sum_probs=76.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   94 (280)
                      ..|.+++|++|+++.|.-+.+.-.-+||+|+.+.-.+++..-+.+++..-.     ..|-..+ +   +.+.+++.. ..
T Consensus       149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~-----~idyk~~-d---~~~~L~~a~P~G  219 (340)
T COG2130         149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDA-----GIDYKAE-D---FAQALKEACPKG  219 (340)
T ss_pred             CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCce-----eeecCcc-c---HHHHHHHHCCCC
Confidence            479999999999999987776666679999999999999887777665321     1244444 2   234444444 47


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG  161 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~  161 (280)
                      ||+.|-|.|--                            +..+.++.|  +..+||+..+-++....
T Consensus       220 IDvyfeNVGg~----------------------------v~DAv~~~l--n~~aRi~~CG~IS~YN~  256 (340)
T COG2130         220 IDVYFENVGGE----------------------------VLDAVLPLL--NLFARIPVCGAISQYNA  256 (340)
T ss_pred             eEEEEEcCCch----------------------------HHHHHHHhh--ccccceeeeeehhhcCC
Confidence            99999999842                            245677777  44689998777666543

>PRK05086 malate dehydrogenase; Provisional

Probab=97.15  E-value=0.0053  Score=53.84  Aligned_cols=117  Identities=15%  Similarity=0.165  Sum_probs=62.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHH-c--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           19 RVALITGGATGIGESTVRLFHK-H--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~-~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ++++|.||+|++|.+++..+.. .  +..++++++++.......+..+......+..++-.+.          .+.....
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~----------~~~l~~~   70 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDP----------TPALEGA   70 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCH----------HHHcCCC
Confidence            4789999999999999999865 2  3467888887442111112111111111111121221          1122379


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      |++|.++|....+     ..+   -.+.+..|....-.+    .+.|.+.+..+++.+.|-.
T Consensus        71 DiVIitaG~~~~~-----~~~---R~dll~~N~~i~~~i----i~~i~~~~~~~ivivvsNP  120 (312)
T PRK05086         71 DVVLISAGVARKP-----GMD---RSDLFNVNAGIVKNL----VEKVAKTCPKACIGIITNP  120 (312)
T ss_pred             CEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHH----HHHHHHhCCCeEEEEccCc
Confidence            9999999986431     122   234455665554444    4444444434555555533

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.14  E-value=0.022  Score=49.61  Aligned_cols=42  Identities=19%  Similarity=0.230  Sum_probs=36.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ   57 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~   57 (280)
                      ++.+++++|.|. |++|+.++..|...|++|.+++|+.+..+.
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~  190 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR  190 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            467999999997 679999999999999999999999776443

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.13  E-value=0.0039  Score=53.83  Aligned_cols=48  Identities=19%  Similarity=0.338  Sum_probs=41.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLG   63 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~   63 (280)
                      ++++|+++|.|+ ||-+++++..|++.|+ +|.++.|+.++.+++.+.+.
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~  172 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVIN  172 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            467899999998 8999999999999997 58899999988888877654

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.11  E-value=0.0089  Score=51.04  Aligned_cols=38  Identities=18%  Similarity=0.368  Sum_probs=31.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~   52 (280)
                      ..|++++|+|.|+ ||+|..++..|+..| -++.+++.+.
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~   64 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDD   64 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            3478899999976 599999999999999 4688887663

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.09  E-value=0.0049  Score=53.33  Aligned_cols=48  Identities=17%  Similarity=0.235  Sum_probs=42.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLG   63 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~   63 (280)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.+.+.+.+.
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~  172 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELN  172 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence            467899999997 6799999999999998 69999999998888877764

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.06  E-value=0.0022  Score=54.48  Aligned_cols=74  Identities=11%  Similarity=0.203  Sum_probs=55.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      ++++|+|||+- |+.+++.|.++|+.|++..++....+...+    . ....+..+..+.+++.+++.+     .++|++
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~-g~~~v~~g~l~~~~l~~~l~~-----~~i~~V   69 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----H-QALTVHTGALDPQELREFLKR-----HSIDIL   69 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----c-CCceEEECCCCHHHHHHHHHh-----cCCCEE
Confidence            36999999998 999999999999999999998875443322    1 122344566777777666653     289999


Q ss_pred             EECCC
Q 023553           99 VNNAG  103 (280)
Q Consensus        99 i~~ag  103 (280)
                      |+.+.
T Consensus        70 IDAtH   74 (256)
T TIGR00715        70 VDATH   74 (256)
T ss_pred             EEcCC
Confidence            99875

This enzyme was found to be a monomer by gel filtration.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.05  E-value=0.0031  Score=55.79  Aligned_cols=80  Identities=20%  Similarity=0.246  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|++++|+|+++++|..+++.....|++|+.+.+++++.+.+.+.+..  . .++  |..+.++..+.+.....  +++|
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa--~-~vi--~~~~~~~~~~~i~~~~~--~gvd  223 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGF--D-DAF--NYKEEPDLDAALKRYFP--NGID  223 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--c-eeE--EcCCcccHHHHHHHhCC--CCcE
Confidence            689999999999999999998888999999999888776655443432  1 122  22222222222222211  4799


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++.+.|
T Consensus       224 ~v~d~~g  230 (338)
T cd08295         224 IYFDNVG  230 (338)
T ss_pred             EEEECCC
Confidence            9999876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.02  E-value=0.014  Score=49.19  Aligned_cols=104  Identities=22%  Similarity=0.359  Sum_probs=66.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .++++++|+|+++ +|+++++.+...|.+|++++++++..+.+ +...  .. ..  .|..+.+...++.   ....+.+
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--~~-~~--~~~~~~~~~~~~~---~~~~~~~  202 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KELG--AD-HV--IDYKEEDLEEELR---LTGGGGA  202 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhC--Cc-ee--ccCCcCCHHHHHH---HhcCCCC
Confidence            4688999999999 99999999999999999999987665544 3332  11 11  2333332222222   1222579


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      |+++++++..                           ...+..++.+  +..|+++.++....
T Consensus       203 d~vi~~~~~~---------------------------~~~~~~~~~l--~~~G~~v~~~~~~~  236 (271)
T cd05188         203 DVVIDAVGGP---------------------------ETLAQALRLL--RPGGRIVVVGGTSG  236 (271)
T ss_pred             CEEEECCCCH---------------------------HHHHHHHHhc--ccCCEEEEEccCCC
Confidence            9999998631                           1233444554  34689998877654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=97.02  E-value=0.025  Score=46.66  Aligned_cols=223  Identities=12%  Similarity=0.044  Sum_probs=109.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      ...+.|+++.+|+.+|......||.|+-++|+-..- ...++... ..++...-.+.-++.+-..++..+.+..-.+-+|
T Consensus         4 k~~vfgg~gflg~~ic~~a~~sgy~vvsvsrsgas~~snkid~~~-dve~e~tlvlggnpfsgs~vlk~A~~vv~svgil   82 (283)
T KOG4288|consen    4 KLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSGASPHSNKIDDKQ-DVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGIL   82 (283)
T ss_pred             cceeecccccchhhhhHHHHhcCceEEEeccccCCCcCCCCcchh-hhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEe
Confidence            356789999999999999999999999998874320 00000000 0001111122333333333333332221112111


Q ss_pred             EECC--CCCCCCCCCCCCC-------------------------CHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEE
Q 023553           99 VNNA--GISGAPCPDIREA-------------------------DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTII  151 (280)
Q Consensus        99 i~~a--g~~~~~~~~~~~~-------------------------~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv  151 (280)
                      --|-  -....++.+..+.                         .......+-.+|=...+...++...    .+-.+++
T Consensus        83 sen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~~~m~~ing~ani~a~kaa~~----~gv~~fv  158 (283)
T KOG4288|consen   83 SENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNIILMDRINGTANINAVKAAAK----AGVPRFV  158 (283)
T ss_pred             ecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccchHHHHHhccHhhHHHHHHHHH----cCCceEE
Confidence            1110  0000000000000                         0112233334444444444555433    4567999


Q ss_pred             EEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcch---hhhhhhhhhHHHH-
Q 023553          152 SICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE---RTEDAMVGFRNFV-  227 (280)
Q Consensus       152 ~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~-  227 (280)
                      +||....-.+..-...|=-+|.+.+.=      -+..++.|-..+.||++...+  +......   ..-.+.+....+. 
T Consensus       159 yISa~d~~~~~~i~rGY~~gKR~AE~E------ll~~~~~rgiilRPGFiyg~R--~v~g~~~pL~~vg~pl~~~~~~a~  230 (283)
T KOG4288|consen  159 YISAHDFGLPPLIPRGYIEGKREAEAE------LLKKFRFRGIILRPGFIYGTR--NVGGIKSPLHTVGEPLEMVLKFAL  230 (283)
T ss_pred             EEEhhhcCCCCccchhhhccchHHHHH------HHHhcCCCceeeccceeeccc--ccCcccccHHhhhhhHHHHHHhhh
Confidence            999876644433344788899876532      233355677889999998773  3221110   0001111111111 


Q ss_pred             --hhhc----cCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          228 --ARNA----NMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       228 --~~~~----~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                        ....    +++...+..++||.+++..++...
T Consensus       231 k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~  264 (283)
T KOG4288|consen  231 KPLNKLPLLGPLLAPPVNVESVALAALKAIEDPD  264 (283)
T ss_pred             chhhcCcccccccCCCcCHHHHHHHHHHhccCCC
Confidence              1112    224566788999999999997543

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.02  E-value=0.0039  Score=56.71  Aligned_cols=75  Identities=13%  Similarity=0.192  Sum_probs=55.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++.+|+++|.|+ |+.|+.++..|++.|+ .++++.|+.++.+.+.+.+..   ...+     ..++.       .+...
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~---~~~~-----~~~~l-------~~~l~  241 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN---ASAH-----YLSEL-------PQLIK  241 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC---CeEe-----cHHHH-------HHHhc
Confidence            588999999999 9999999999999996 699999998888777776531   1111     11222       22335


Q ss_pred             CccEEEECCCCC
Q 023553           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~id~li~~ag~~  105 (280)
                      .-|++|++.+..
T Consensus       242 ~aDiVI~aT~a~  253 (414)
T PRK13940        242 KADIIIAAVNVL  253 (414)
T ss_pred             cCCEEEECcCCC
Confidence            789999998754

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.99  E-value=0.0046  Score=53.54  Aligned_cols=79  Identities=24%  Similarity=0.401  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++++++|+|+++++|+.+++.+...|+.|++++++.+..+.+ +.+.  ...   ..|..+.+...++.+.. . .+++|
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g--~~~---~~~~~~~~~~~~~~~~~-~-~~~~d  210 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALG--ADV---AINYRTEDFAEEVKEAT-G-GRGVD  210 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcC--CCE---EEeCCchhHHHHHHHHh-C-CCCeE
Confidence            688999999999999999999999999999999987766555 3332  111   12333333333322211 1 13799


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++++++|
T Consensus       211 ~vi~~~g  217 (323)
T cd05276         211 VILDMVG  217 (323)
T ss_pred             EEEECCc
Confidence            9999987

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.99  E-value=0.0071  Score=53.61  Aligned_cols=82  Identities=20%  Similarity=0.316  Sum_probs=55.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc---------------------chHHHH---HHHhCCCCC
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD---------------------NLGQQV---CQSLGGEPD   67 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~---------------------~~~~~~---~~~~~~~~~   67 (280)
                      ...+++++|+|.|+ ||+|..+++.|+..|. ++.+++++.                     .+.+.+   .+++.+..+
T Consensus        19 Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~   97 (338)
T PRK12475         19 QRKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVE   97 (338)
T ss_pred             HHhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcE
Confidence            34588999999997 6799999999999998 688888863                     122222   233344455


Q ss_pred             eEEEecCCCCHHHHHHHHHHHHHHhCCccEEEECCC
Q 023553           68 TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG  103 (280)
Q Consensus        68 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag  103 (280)
                      +..+..|++. +.+.+++       ...|++|.+..
T Consensus        98 i~~~~~~~~~-~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475         98 IVPVVTDVTV-EELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEEEeccCCH-HHHHHHh-------cCCCEEEEcCC
Confidence            6666677753 3333332       37888888763

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.99  E-value=0.0054  Score=49.22  Aligned_cols=43  Identities=23%  Similarity=0.251  Sum_probs=36.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ   56 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~   56 (280)
                      ..++.||++.|.|. |.||+++|+.+...|++|+..+|+.....
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            45789999999976 89999999999999999999999987654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.98  E-value=0.0043  Score=53.74  Aligned_cols=48  Identities=13%  Similarity=0.212  Sum_probs=38.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcc---hHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDN---LGQQVCQSLG   63 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~---~~~~~~~~~~   63 (280)
                      ++++|+++|.|++ |-+++++..|+..|+ +|.++.|+.+   +.+++.+.+.
T Consensus       121 ~~~~k~vlvlGaG-GaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        121 DIKGKTMVLLGAG-GASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CcCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            4689999999984 559999999999997 6999999853   6666666554

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.98  E-value=0.004  Score=53.94  Aligned_cols=44  Identities=18%  Similarity=0.237  Sum_probs=38.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   58 (280)
                      .++.||+++|.|. |++|+++++.|...|++|++.+|+.+..+..
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~  190 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARI  190 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3688999999999 6699999999999999999999998765443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.95  E-value=0.0041  Score=55.38  Aligned_cols=80  Identities=20%  Similarity=0.241  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|.+++|.|+++++|..+++.....|++|+.++++.++.+.+.+.+..  + .++  |..+.++..+.+.+...  +++|
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa--~-~vi--~~~~~~~~~~~i~~~~~--~gvD  230 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF--D-EAF--NYKEEPDLDAALKRYFP--EGID  230 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCC--C-EEE--ECCCcccHHHHHHHHCC--CCcE
Confidence            689999999999999999998888999999998888776655434432  2 122  22222222222222211  3699


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++.+.|
T Consensus       231 ~v~d~vG  237 (348)
T PLN03154        231 IYFDNVG  237 (348)
T ss_pred             EEEECCC
Confidence            9999887

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.95  E-value=0.0078  Score=53.40  Aligned_cols=77  Identities=22%  Similarity=0.308  Sum_probs=51.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+|++++|+|+ |++|...++.+...|+ +|+++++++++++.+ +++..  + .++  |..+. ++.+    +.+..++
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa--~-~vi--~~~~~-~~~~----~~~~~g~  235 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGA--D-KLV--NPQND-DLDH----YKAEKGY  235 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCC--c-EEe--cCCcc-cHHH----HhccCCC
Confidence            36899999986 8999999998888898 588899888776654 33431  2 122  33332 2222    2222356


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       236 ~D~vid~~G~  245 (343)
T PRK09880        236 FDVSFEVSGH  245 (343)
T ss_pred             CCEEEECCCC
Confidence            9999999873

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.94  E-value=0.0055  Score=54.19  Aligned_cols=77  Identities=18%  Similarity=0.220  Sum_probs=52.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      ++++|+|+++++|..+++.....|+ +|+.+.+++++.+.+.+.+..  +. ++  |..+. +..+.+.++..  +++|+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa--~~-vi--~~~~~-~~~~~i~~~~~--~gvd~  227 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGF--DA-AI--NYKTD-NVAERLRELCP--EGVDV  227 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCC--cE-EE--ECCCC-CHHHHHHHHCC--CCceE
Confidence            8999999999999999988888899 799999888776665554432  21 22  22221 22222222221  47999


Q ss_pred             EEECCC
Q 023553           98 MVNNAG  103 (280)
Q Consensus        98 li~~ag  103 (280)
                      ++.+.|
T Consensus       228 vid~~g  233 (345)
T cd08293         228 YFDNVG  233 (345)
T ss_pred             EEECCC
Confidence            999886

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.93  E-value=0.0061  Score=56.12  Aligned_cols=79  Identities=20%  Similarity=0.198  Sum_probs=55.1

Q ss_pred             ccCCcEEEEEcCC----------------ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH
Q 023553           15 RLVGRVALITGGA----------------TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE   78 (280)
Q Consensus        15 ~l~~k~vlItGas----------------~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~   78 (280)
                      +|+||++|||+|.                |-.|.+||+.+...|++|.+++-...        +.....+.++.+  .+.
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~~p~~v~~i~V--~ta  322 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LADPQGVKVIHV--ESA  322 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CCCCCCceEEEe--cCH
Confidence            5899999999763                47899999999999999999874332        111223444433  334


Q ss_pred             HHHHHHHHHHHHHhCCccEEEECCCCCCC
Q 023553           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        79 ~~~~~~~~~~~~~~g~id~li~~ag~~~~  107 (280)
                         .++.+.+.+.+. .|++|.+|.+...
T Consensus       323 ---~eM~~av~~~~~-~Di~I~aAAVaDy  347 (475)
T PRK13982        323 ---RQMLAAVEAALP-ADIAIFAAAVADW  347 (475)
T ss_pred             ---HHHHHHHHhhCC-CCEEEEeccccce
Confidence               444555555543 7999999998754

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.90  E-value=0.026  Score=49.55  Aligned_cols=115  Identities=16%  Similarity=0.217  Sum_probs=72.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      ++.+++++.|+|+ |.+|..++..|+..|.  .+++++++++.++.....+...    ..+... .  .+.++       
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~-------   70 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD-------   70 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH-------
Confidence            3467889999998 9999999999999887  6999999888766555544321    122222 1  12222       


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEcc
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICS  155 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS  155 (280)
                          +..-|++|..||....+     ..+..   +.++.|..-    ++.+.+.+.+. .++.+++++-
T Consensus        71 ----~~~adivIitag~~~k~-----g~~R~---dll~~N~~i----~~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         71 ----CKDADLVVITAGAPQKP-----GETRL---DLVEKNLKI----FKSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             ----hCCCCEEEEecCCCCCC-----CCCHH---HHHHHHHHH----HHHHHHHHHHhCCCeEEEEccC
Confidence                24899999999985431     23433   334445443    34444444433 3577777663

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.86  E-value=0.0037  Score=58.08  Aligned_cols=72  Identities=15%  Similarity=0.243  Sum_probs=52.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+.....    .  .+..   +..        ....
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~----~--~~~~---~~~--------~l~~  390 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK----A--FPLE---SLP--------ELHR  390 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc----e--echh---Hhc--------ccCC
Confidence            467899999996 69999999999999999999999988777766554311    1  1111   111        1247


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      .|++||+...
T Consensus       391 ~DiVInatP~  400 (477)
T PRK09310        391 IDIIINCLPP  400 (477)
T ss_pred             CCEEEEcCCC
Confidence            8999999854

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.85  E-value=0.0053  Score=53.73  Aligned_cols=75  Identities=24%  Similarity=0.403  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .+.+++|+|+++++|+++++.+...|++|+.+.++.+..+.+ +...  .. ..+  |.   ++.   .+.+. +..++|
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~--~~-~~~--~~---~~~---~~~~~-~~~~~d  228 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELG--AD-YVI--DG---SKF---SEDVK-KLGGAD  228 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcC--Cc-EEE--ec---HHH---HHHHH-hccCCC
Confidence            578999999999999999999999999999998887665544 2222  11 111  21   112   22222 234799


Q ss_pred             EEEECCCC
Q 023553           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++++++|.
T Consensus       229 ~v~~~~g~  236 (332)
T cd08259         229 VVIELVGS  236 (332)
T ss_pred             EEEECCCh
Confidence            99999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.84  E-value=0.0046  Score=54.34  Aligned_cols=79  Identities=18%  Similarity=0.220  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|.+++|+|+++++|..+++.....|++|+.+.++.++.+.+ +.+..  +. ++  |..+.+...+.+.....  +++|
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa--~~-vi--~~~~~~~~~~~~~~~~~--~gvd  209 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGF--DV-AF--NYKTVKSLEETLKKASP--DGYD  209 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCC--CE-EE--eccccccHHHHHHHhCC--CCeE
Confidence            688999999999999999998888899999999888766555 33432  22 22  22222233333333221  3699


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++.+.|
T Consensus       210 vv~d~~G  216 (325)
T TIGR02825       210 CYFDNVG  216 (325)
T ss_pred             EEEECCC
Confidence            9999886

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.82  E-value=0.021  Score=47.74  Aligned_cols=148  Identities=18%  Similarity=0.150  Sum_probs=81.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHH----------------------HHHHHhCCCCCeEE
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQ----------------------QVCQSLGGEPDTFF   70 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~----------------------~~~~~~~~~~~~~~   70 (280)
                      ..|++++|+|.|+ ||+|..+++.|+..|. ++++++.+.-...                      +...++.+..++..
T Consensus         7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~   85 (231)
T cd00755           7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDA   85 (231)
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            4578889999976 5999999999999997 5888776532211                      11222233334444


Q ss_pred             EecCCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceE
Q 023553           71 CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTI  150 (280)
Q Consensus        71 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~i  150 (280)
                      +...++ ++....++.      .+.|++|.+....                       ..-..+.+.+...     +-.+
T Consensus        86 ~~~~i~-~~~~~~l~~------~~~D~VvdaiD~~-----------------------~~k~~L~~~c~~~-----~ip~  130 (231)
T cd00755          86 VEEFLT-PDNSEDLLG------GDPDFVVDAIDSI-----------------------RAKVALIAYCRKR-----KIPV  130 (231)
T ss_pred             eeeecC-HhHHHHHhc------CCCCEEEEcCCCH-----------------------HHHHHHHHHHHHh-----CCCE
Confidence            433333 222222221      2577777665321                       1112222333221     1234


Q ss_pred             EEEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeE--EEEEe
Q 023553          151 ISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR--VNCVS  197 (280)
Q Consensus       151 v~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~--v~~v~  197 (280)
                      |...+..+.........-..+|.-..-|++.++++|+..||+  +.+|.
T Consensus       131 I~s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~  179 (231)
T cd00755         131 ISSMGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY  179 (231)
T ss_pred             EEEeCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence            443333332221222344556777788999999999988885  44443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.81  E-value=0.0047  Score=53.46  Aligned_cols=79  Identities=14%  Similarity=0.119  Sum_probs=62.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      ..-++|.||++..|.-+|++|+.+|.+-.+.+|+.+++..+...+....  ..+.++  ++..+.+++.       +.++
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~--~~~p~~--~p~~~~~~~~-------~~~V   74 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEA--AVFPLG--VPAALEAMAS-------RTQV   74 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccc--cccCCC--CHHHHHHHHh-------cceE
Confidence            4568999999999999999999999999999999999999988887543  233333  3655555444       8889


Q ss_pred             EEECCCCCCC
Q 023553           98 MVNNAGISGA  107 (280)
Q Consensus        98 li~~ag~~~~  107 (280)
                      |+|++|....
T Consensus        75 VlncvGPyt~   84 (382)
T COG3268          75 VLNCVGPYTR   84 (382)
T ss_pred             EEeccccccc
Confidence            9999997643

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.80  E-value=0.029  Score=49.13  Aligned_cols=110  Identities=17%  Similarity=0.213  Sum_probs=68.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCC-----CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGE-----PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++.|.|+ |++|+.++..|+..|  ..|++++++.+..+.....+...     ...... .  .+.++           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------
Confidence            36788886 899999999999999  57999999988777665555221     111222 1  22221           


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEcc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICS  155 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS  155 (280)
                      ...-|++|+++|....     ...+..   +.++.|..-    ++.+.+.+.+. .++.++++|-
T Consensus        66 l~~aDIVIitag~~~~-----~g~~R~---dll~~N~~i----~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          66 CKDADIVVITAGAPQK-----PGETRL---DLLEKNAKI----MKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             hCCCCEEEEccCCCCC-----CCCCHH---HHHHHHHHH----HHHHHHHHHHhCCCeEEEEecC
Confidence            1489999999997532     123332   334444443    44444444333 3577777664

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.80  E-value=0.002  Score=43.20  Aligned_cols=35  Identities=26%  Similarity=0.412  Sum_probs=24.1

Q ss_pred             CC-cEEEEEcCCChHHHH--HHHHHHHcCCeEEEEecCc
Q 023553           17 VG-RVALITGGATGIGES--TVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        17 ~~-k~vlItGas~giG~~--ia~~l~~~g~~Vi~~~r~~   52 (280)
                      .| |+|||+|+|+|.|.+  |+..| ..|++.+.++...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            45 899999999999999  66666 6788888876543

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.80  E-value=0.015  Score=50.30  Aligned_cols=76  Identities=24%  Similarity=0.330  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCC-CHHHHHHHHHHHHHHhCCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVT-KEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~i   95 (280)
                      .|+++.|+|+++ ||.--++.-...|++|++++++..+.+++.+.+..  +..   .|.+ |++.+.++.+..   -+.+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGA--d~f---v~~~~d~d~~~~~~~~~---dg~~  251 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGA--DVF---VDSTEDPDIMKAIMKTT---DGGI  251 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCc--cee---EEecCCHHHHHHHHHhh---cCcc
Confidence            899999999998 99877766666799999999999888888887763  222   2556 666665554422   1345


Q ss_pred             cEEEEC
Q 023553           96 DIMVNN  101 (280)
Q Consensus        96 d~li~~  101 (280)
                      |.++|.
T Consensus       252 ~~v~~~  257 (360)
T KOG0023|consen  252 DTVSNL  257 (360)
T ss_pred             eeeeec
Confidence            555544

>cd00704 MDH Malate dehydrogenase

Probab=96.80  E-value=0.018  Score=50.76  Aligned_cols=110  Identities=14%  Similarity=0.126  Sum_probs=64.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCc--chHHHHHHHhCCCCCeEEEecCCCCHHHHH----HHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGA-------KVCIADVQD--NLGQQVCQSLGGEPDTFFCHCDVTKEEDVC----SAVD   86 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~~   86 (280)
                      ++.|+||+|.+|..++..|+..+.       .++++++++  +.++.             ...|+.+.....    .+..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g-------------~~~Dl~d~~~~~~~~~~i~~   68 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEG-------------VVMELQDCAFPLLKGVVITT   68 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccce-------------eeeehhhhcccccCCcEEec
Confidence            589999999999999999998652       489999876  33221             122332221000    0001


Q ss_pred             HHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC--CCceEEEEc
Q 023553           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ--TKGTIISIC  154 (280)
Q Consensus        87 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~g~iv~is  154 (280)
                      ...+.+...|++|+.||....+     ..+.   .+.+..|+    .+++.+.+.+.+.  .++.++.+|
T Consensus        69 ~~~~~~~~aDiVVitAG~~~~~-----g~tR---~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          69 DPEEAFKDVDVAILVGAFPRKP-----GMER---ADLLRKNA----KIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             ChHHHhCCCCEEEEeCCCCCCc-----CCcH---HHHHHHhH----HHHHHHHHHHHHhCCCCeEEEEeC
Confidence            1122335899999999985431     2333   33444444    4455666666555  356677665

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.76  E-value=0.031  Score=52.11  Aligned_cols=78  Identities=15%  Similarity=0.115  Sum_probs=51.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|+++|.|+ |++|.++|+.|+++|++|.+++++++ ......+.+... .+.+...+-..             ..
T Consensus        12 ~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~-gv~~~~~~~~~-------------~~   76 (480)
T PRK01438         12 SDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL-GATVRLGPGPT-------------LP   76 (480)
T ss_pred             cCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc-CCEEEECCCcc-------------cc
Confidence            3578999999997 67999999999999999999986653 222223333222 23333222111             01


Q ss_pred             CCccEEEECCCCCC
Q 023553           93 GTLDIMVNNAGISG  106 (280)
Q Consensus        93 g~id~li~~ag~~~  106 (280)
                      ...|.+|...|+..
T Consensus        77 ~~~D~Vv~s~Gi~~   90 (480)
T PRK01438         77 EDTDLVVTSPGWRP   90 (480)
T ss_pred             CCCCEEEECCCcCC
Confidence            36899999999854

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.76  E-value=0.013  Score=51.54  Aligned_cols=113  Identities=12%  Similarity=0.117  Sum_probs=65.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHH--HH--HHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGA-------KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVC--SA--VDLT   88 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--~~--~~~~   88 (280)
                      ++.|+|++|.+|..++..|+..+.       .+++++++++...           ......|+.+.....  ..  ....
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~-----------a~g~~~Dl~d~~~~~~~~~~~~~~~   69 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV-----------LEGVVMELMDCAFPLLDGVVPTHDP   69 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc-----------cceeEeehhcccchhcCceeccCCh
Confidence            478999999999999999998554       4889998654310           011222333332100  00  0011


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC--CCceEEEEcc
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ--TKGTIISICS  155 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~g~iv~isS  155 (280)
                      .+.+...|++|+.||....     ..   +++.+.+..|+.    +++.+.+.+.+.  .++.++.+|.
T Consensus        70 ~~~~~~aDiVVitAG~~~~-----~~---~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        70 AVAFTDVDVAILVGAFPRK-----EG---MERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             HHHhCCCCEEEEcCCCCCC-----CC---CcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence            2233589999999997532     11   234556666654    445555555544  3567776663

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.71  E-value=0.01  Score=54.40  Aligned_cols=48  Identities=21%  Similarity=0.461  Sum_probs=41.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLG   63 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~   63 (280)
                      ++.+++++|.|+ |.+|+.+++.|...|+ .|++++|+.+..+.+.+.+.
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g  227 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG  227 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC
Confidence            478999999987 9999999999999997 69999999888776666543

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.70  E-value=0.011  Score=54.03  Aligned_cols=74  Identities=27%  Similarity=0.444  Sum_probs=53.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++.+++++|.|+ |.+|+.+++.|...| ..|++++|+.+...+..+.+..    ..+     +.++..+.+       .
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~----~~i-----~~~~l~~~l-------~  239 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG----EAV-----KFEDLEEYL-------A  239 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC----eEe-----eHHHHHHHH-------h
Confidence            478999999997 999999999999999 6799999998877666665432    111     112222222       3


Q ss_pred             CccEEEECCCCC
Q 023553           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~id~li~~ag~~  105 (280)
                      ..|++|.+.+..
T Consensus       240 ~aDvVi~aT~s~  251 (417)
T TIGR01035       240 EADIVISSTGAP  251 (417)
T ss_pred             hCCEEEECCCCC
Confidence            689999987643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.67  E-value=0.017  Score=51.26  Aligned_cols=38  Identities=29%  Similarity=0.496  Sum_probs=34.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~   51 (280)
                      ...|+.++|+|.|+ ||+|..++..|+..|. ++.+++.+
T Consensus        19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         19 QQKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             HHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            44688999999998 8999999999999998 79998876

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.63  E-value=0.0083  Score=51.62  Aligned_cols=80  Identities=14%  Similarity=0.255  Sum_probs=57.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+.+++.++|.|+ ||-+++++..|++.|+ +|+++.|+.++.+++.+....... .....+..+.+...          
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~~~~~~~~~~~~~~----------  189 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-AVEAAALADLEGLE----------  189 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-cccccccccccccc----------
Confidence            3457899999986 6789999999999995 699999999999888887764322 11112333222210          


Q ss_pred             CCccEEEECCCCCC
Q 023553           93 GTLDIMVNNAGISG  106 (280)
Q Consensus        93 g~id~li~~ag~~~  106 (280)
                       ..|++||+....-
T Consensus       190 -~~dliINaTp~Gm  202 (283)
T COG0169         190 -EADLLINATPVGM  202 (283)
T ss_pred             -ccCEEEECCCCCC
Confidence             5799999976643

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.62  E-value=0.015  Score=51.77  Aligned_cols=80  Identities=23%  Similarity=0.348  Sum_probs=54.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH-hCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK-FGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~   94 (280)
                      -+|+.+||.||++|+|.+.++.....|+..+++.++.+..+- .+.+.   .-..  .|..+++-    .+++++. .++
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l-~k~lG---Ad~v--vdy~~~~~----~e~~kk~~~~~  225 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLEL-VKKLG---ADEV--VDYKDENV----VELIKKYTGKG  225 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHH-HHHcC---CcEe--ecCCCHHH----HHHHHhhcCCC
Confidence            478899999999999999999999999556666666655443 34443   1122  36666443    3344333 468


Q ss_pred             ccEEEECCCCC
Q 023553           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 id~li~~ag~~  105 (280)
                      +|+++-+.|..
T Consensus       226 ~DvVlD~vg~~  236 (347)
T KOG1198|consen  226 VDVVLDCVGGS  236 (347)
T ss_pred             ccEEEECCCCC
Confidence            99999999863

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.62  E-value=0.008  Score=51.83  Aligned_cols=38  Identities=21%  Similarity=0.378  Sum_probs=34.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~   51 (280)
                      .+++||.++|.|+++-.|+.++..|.++|++|.++.|.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            46899999999999999999999999999999888764

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.62  E-value=0.013  Score=51.24  Aligned_cols=78  Identities=18%  Similarity=0.208  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|.+++|.||++++|..+++.....|++|+.+.+++++.+.+.+ +..  + .++  |..+++...+ +.+...  +++|
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga--~-~vi--~~~~~~~~~~-v~~~~~--~gvd  213 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGF--D-AVF--NYKTVSLEEA-LKEAAP--DGID  213 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC--C-EEE--eCCCccHHHH-HHHHCC--CCcE
Confidence            68899999999999999999888899999999988876655533 331  2 122  2233222222 222211  4699


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++.+.|
T Consensus       214 ~vld~~g  220 (329)
T cd08294         214 CYFDNVG  220 (329)
T ss_pred             EEEECCC
Confidence            9998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.61  E-value=0.02  Score=50.48  Aligned_cols=79  Identities=22%  Similarity=0.273  Sum_probs=52.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ..|++++|+|+ +++|..+++.+...|++ |+++++++++.+.+ +++..  . .+  .|..+.+ ..++.+.. . ..+
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga--~-~~--i~~~~~~-~~~~~~~~-~-~~~  231 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGA--D-FV--INSGQDD-VQEIRELT-S-GAG  231 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCC--C-EE--EcCCcch-HHHHHHHh-C-CCC
Confidence            35899999986 89999999999999999 99998888776554 44431  1 12  2333333 32222211 1 126


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.+.|.
T Consensus       232 ~d~vid~~g~  241 (339)
T cd08239         232 ADVAIECSGN  241 (339)
T ss_pred             CCEEEECCCC
Confidence            9999999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.58  E-value=0.058  Score=41.49  Aligned_cols=111  Identities=20%  Similarity=0.290  Sum_probs=69.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCC----CC-CeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGG----EP-DTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++.|+|++|.+|..++..|...+.  .+++++++++..+.....+..    .. ......   .+.+++           
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~-----------   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEAL-----------   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccccc-----------
Confidence            688999999999999999999864  599999997765554444321    11 222222   233322           


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                      ..-|++|..||....+     ..+.   .+.++.|..-.-.+.+.+.++   ..++.++.++.
T Consensus        68 ~~aDivvitag~~~~~-----g~sR---~~ll~~N~~i~~~~~~~i~~~---~p~~~vivvtN  119 (141)
T PF00056_consen   68 KDADIVVITAGVPRKP-----GMSR---LDLLEANAKIVKEIAKKIAKY---APDAIVIVVTN  119 (141)
T ss_dssp             TTESEEEETTSTSSST-----TSSH---HHHHHHHHHHHHHHHHHHHHH---STTSEEEE-SS
T ss_pred             ccccEEEEeccccccc-----cccH---HHHHHHhHhHHHHHHHHHHHh---CCccEEEEeCC
Confidence            4899999999975431     2333   344556655555555555544   34567766643

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.56  E-value=0.026  Score=46.25  Aligned_cols=41  Identities=20%  Similarity=0.311  Sum_probs=36.6

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      |...+++||.++|.|| |.+|...++.|.+.|++|+++++..
T Consensus         3 Pl~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          3 PLMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             ceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            4567899999999998 8899999999999999999998764

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.55  E-value=0.0073  Score=47.92  Aligned_cols=41  Identities=17%  Similarity=0.329  Sum_probs=36.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      .++.||+++|.|++.-.|..+++.|.++|++|.++.|+.+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~   80 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKN   80 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchh
Confidence            46899999999997778999999999999999999987543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK14968 putative methyltransferase; Provisional

Probab=96.53  E-value=0.035  Score=44.43  Aligned_cols=120  Identities=15%  Similarity=0.100  Sum_probs=68.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CC-CeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EP-DTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++++|-.|++.|.   ++..+++.+.+|++++.+++..+...+.+..   .. .+.++.+|+.+.         ..+ 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc-
Confidence            378899999987776   5555666689999999998776655444421   11 167778886542         111 


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhh---HHHHHHHHHHhcccCCCceEEEEc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG---VFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~---~~~l~~~~~~~l~~~~~g~iv~is  154 (280)
                       +++|.++.|......  .+.... .+.+...+.....+   .-.+++.+.+.|+  .+|.++++.
T Consensus        89 -~~~d~vi~n~p~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk--~gG~~~~~~  148 (188)
T PRK14968         89 -DKFDVILFNPPYLPT--EEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLK--PGGRILLLQ  148 (188)
T ss_pred             -cCceEEEECCCcCCC--Cchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcC--CCeEEEEEE
Confidence             279999998875432  211111 11222222222222   2235666667763  356666553

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.52  E-value=0.071  Score=46.97  Aligned_cols=145  Identities=10%  Similarity=0.031  Sum_probs=89.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCcch--HHHHHHHhCC-C----CCeEEEecCCCCHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGA-------KVCIADVQDNL--GQQVCQSLGG-E----PDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~~~--~~~~~~~~~~-~----~~~~~~~~D~~~~~~~~~   83 (280)
                      -+++.|+|++|.+|..++..|+..|.       .+++++.+++.  ++.....+.. .    .++. +.  ..+.+    
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~--~~~~~----   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-IT--DDPNV----   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-Ee--cCcHH----
Confidence            35889999999999999999998775       68999985432  3222222211 1    1111 11  11222    


Q ss_pred             HHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC--CceEEEEccccc---
Q 023553           84 AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAG---  158 (280)
Q Consensus        84 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~isS~~~---  158 (280)
                             .+..-|++|..||....   +  ..+..+   .+..|+    .+++.+.+.+.+..  ++.++.+|--.-   
T Consensus        75 -------~~~daDivvitaG~~~k---~--g~tR~d---ll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t  135 (322)
T cd01338          75 -------AFKDADWALLVGAKPRG---P--GMERAD---LLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTNA  135 (322)
T ss_pred             -------HhCCCCEEEEeCCCCCC---C--CCcHHH---HHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHHH
Confidence                   22489999999997532   1  234332   344444    44555666655543  567777663111   


Q ss_pred             -----ccc-CCCCccchhhHHHHHHHHHHHHHHHCC
Q 023553          159 -----AIG-GLGPHAYTGSKHAVLGLNKNVAAELGK  188 (280)
Q Consensus       159 -----~~~-~~~~~~Y~~sK~al~~~~~~la~e~~~  188 (280)
                           ..+ .|....|+.++.--..|...+++.+.-
T Consensus       136 ~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         136 LIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             HHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCc
Confidence                 112 455668999999999999999999753

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.52  E-value=0.11  Score=43.70  Aligned_cols=78  Identities=18%  Similarity=0.207  Sum_probs=58.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      +|.++||--|.+|.|..+|+.+...|+.++.+..+.++.+.+.+    ++.-+.|  |-+.++-    +.++.+..  .+
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake----nG~~h~I--~y~~eD~----v~~V~kiTngKG  215 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE----NGAEHPI--DYSTEDY----VDEVKKITNGKG  215 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh----cCCccee--eccchhH----HHHHHhccCCCC
Confidence            78999999999999999999999999999999999888766544    2222333  4445444    34444433  37


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|+++-..|.
T Consensus       216 Vd~vyDsvG~  225 (336)
T KOG1197|consen  216 VDAVYDSVGK  225 (336)
T ss_pred             ceeeeccccc
Confidence            9999988875

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.52  E-value=0.043  Score=48.80  Aligned_cols=41  Identities=22%  Similarity=0.376  Sum_probs=36.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   58 (280)
                      .|++++|.|+ +++|...++.+...|++|+++++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            5899999999 9999999999999999999999988877655

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.46  E-value=0.019  Score=50.30  Aligned_cols=72  Identities=21%  Similarity=0.427  Sum_probs=53.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +.+++++|.|+ |.+|+.+++.|...| ..|++++|+.++..++.+.+..    ..+     +.++..+.+       ..
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~----~~~-----~~~~~~~~l-------~~  238 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG----NAV-----PLDELLELL-------NE  238 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC----eEE-----eHHHHHHHH-------hc
Confidence            68999999987 999999999999976 5688999998887777776542    111     222322222       36


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      .|++|.+.+.
T Consensus       239 aDvVi~at~~  248 (311)
T cd05213         239 ADVVISATGA  248 (311)
T ss_pred             CCEEEECCCC
Confidence            7999999874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.46  E-value=0.028  Score=45.98  Aligned_cols=38  Identities=26%  Similarity=0.405  Sum_probs=33.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~   51 (280)
                      ...|+.++|+|.|+ ||+|..++..|+..|. ++++++.+
T Consensus        16 q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        16 VQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            44588999999998 7899999999999999 59998887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.46  E-value=0.0045  Score=44.89  Aligned_cols=39  Identities=28%  Similarity=0.448  Sum_probs=33.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      ..+++||++||.|| |.+|..-++.|.+.|++|.+++...
T Consensus         2 ~l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    2 FLDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             EE--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            46799999999999 8999999999999999999999885

>PLN02928 oxidoreductase family protein

Probab=96.45  E-value=0.018  Score=51.24  Aligned_cols=39  Identities=21%  Similarity=0.287  Sum_probs=35.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      .++.||++.|.|- |.||+.+|+.|...|++|++.+|+..
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~  193 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWT  193 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCC
Confidence            4689999999998 89999999999999999999998743

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.42  E-value=0.035  Score=49.43  Aligned_cols=74  Identities=23%  Similarity=0.425  Sum_probs=48.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC---cchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..|++++|+|+ |++|...++.+...|++|++++|+   +++.+ ..+++..  .  .+  |..++ +..+    . ...
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~Ga--~--~v--~~~~~-~~~~----~-~~~  236 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEELGA--T--YV--NSSKT-PVAE----V-KLV  236 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCC--E--Ee--cCCcc-chhh----h-hhc
Confidence            36899999986 999999998888889999999984   33333 3344331  2  22  33222 2211    1 122


Q ss_pred             CCccEEEECCC
Q 023553           93 GTLDIMVNNAG  103 (280)
Q Consensus        93 g~id~li~~ag  103 (280)
                      +++|++|.++|
T Consensus       237 ~~~d~vid~~g  247 (355)
T cd08230         237 GEFDLIIEATG  247 (355)
T ss_pred             CCCCEEEECcC
Confidence            57999999997

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.42  E-value=0.018  Score=49.93  Aligned_cols=79  Identities=28%  Similarity=0.410  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++++++|+|+++++|.++++.+...|++|+++.++++..+.. ....  .+..   .+....+....+.... . -+++|
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--~~~~---~~~~~~~~~~~~~~~~-~-~~~~d  210 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALG--ADIA---INYREEDFVEVVKAET-G-GKGVD  210 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC--CcEE---EecCchhHHHHHHHHc-C-CCCeE
Confidence            688999999999999999999999999999999887765543 3332  1111   1222333322222211 1 13699


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|+++|
T Consensus       211 ~~i~~~~  217 (325)
T TIGR02824       211 VILDIVG  217 (325)
T ss_pred             EEEECCc
Confidence            9999886

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.36  E-value=0.044  Score=49.02  Aligned_cols=74  Identities=24%  Similarity=0.392  Sum_probs=50.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|++++|.|+ +++|..+++.....|++|++++.+.++..+..+.+..  + .++  |..+.+.+.       +..+.+|
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga--~-~vi--~~~~~~~~~-------~~~~~~D  249 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGA--D-SFL--VSTDPEKMK-------AAIGTMD  249 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCC--c-EEE--cCCCHHHHH-------hhcCCCC
Confidence            6889999765 8999999998888999998888777665555444432  1 122  223332222       2224689


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|.+.|
T Consensus       250 ~vid~~g  256 (360)
T PLN02586        250 YIIDTVS  256 (360)
T ss_pred             EEEECCC
Confidence            9999887

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.33  E-value=0.035  Score=51.04  Aligned_cols=41  Identities=15%  Similarity=0.410  Sum_probs=36.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~   55 (280)
                      ..+.||+++|.|.+ .||+.+|+.+...|++|+++.+++...
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            46899999999987 599999999999999999998876544

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.33  E-value=0.023  Score=57.21  Aligned_cols=79  Identities=13%  Similarity=0.164  Sum_probs=61.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc-CCe-------------EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKH-GAK-------------VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED   80 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~-g~~-------------Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   80 (280)
                      ..+.|+|+|.|+ |.+|+.+++.|++. ++.             |.+++++.+..+++.+...   .+..+..|++|.++
T Consensus       566 ~~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~---~~~~v~lDv~D~e~  641 (1042)
T PLN02819        566 TKKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE---NAEAVQLDVSDSES  641 (1042)
T ss_pred             cccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC---CCceEEeecCCHHH
Confidence            346889999997 99999999999986 333             7788888877776666542   35578899999988


Q ss_pred             HHHHHHHHHHHhCCccEEEECCCC
Q 023553           81 VCSAVDLTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        81 ~~~~~~~~~~~~g~id~li~~ag~  104 (280)
                      +.++++       ++|+||++...
T Consensus       642 L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        642 LLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHhhc-------CCCEEEECCCc
Confidence            766555       69999999764

>PLN00203 glutamyl-tRNA reductase

Probab=96.32  E-value=0.027  Score=52.80  Aligned_cols=76  Identities=9%  Similarity=0.227  Sum_probs=54.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +.+++++|.|+ |.+|+.+++.|...|+ +|+++.|+.+..+.+.+.+.. ..+.+.  +   .++....+       ..
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~~--~---~~dl~~al-------~~  329 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIYK--P---LDEMLACA-------AE  329 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEee--c---HhhHHHHH-------hc
Confidence            78999999999 9999999999999997 699999999888887766531 111111  1   12222222       37


Q ss_pred             ccEEEECCCCC
Q 023553           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 id~li~~ag~~  105 (280)
                      .|++|.+.+..
T Consensus       330 aDVVIsAT~s~  340 (519)
T PLN00203        330 ADVVFTSTSSE  340 (519)
T ss_pred             CCEEEEccCCC
Confidence            89999887643

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.31  E-value=0.028  Score=49.29  Aligned_cols=114  Identities=16%  Similarity=0.126  Sum_probs=67.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCe--EEEEecCc--chHHHHHHHhCC----CC-CeEEEecCCCCHHHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAK--VCIADVQD--NLGQQVCQSLGG----EP-DTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~--Vi~~~r~~--~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +++.|+|++|.+|..++..|+..|..  |++++++.  +.++.....+..    .. ...+...  ++.++         
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~--~d~~~---------   69 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKIS--SDLSD---------   69 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEEC--CCHHH---------
Confidence            36899999999999999999999865  99999954  333322222211    11 1111111  12211         


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV  156 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~  156 (280)
                        ...-|++|.++|....     ...+.   .+.++.|+.-.....+.+.+.   ..++.++.+++.
T Consensus        70 --l~~aDiViitag~p~~-----~~~~r---~dl~~~n~~i~~~~~~~i~~~---~~~~~viv~~np  123 (309)
T cd05294          70 --VAGSDIVIITAGVPRK-----EGMSR---LDLAKKNAKIVKKYAKQIAEF---APDTKILVVTNP  123 (309)
T ss_pred             --hCCCCEEEEecCCCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCc
Confidence              2489999999997532     12332   334455555555555555444   235788888764

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.31  E-value=0.025  Score=49.48  Aligned_cols=79  Identities=16%  Similarity=0.204  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++.+++|.|+++++|.++++.+.+.|++|+.+.++.+..+.+.+.+..  . .++  |..+.+...++. ....  +++|
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~--~-~~~--~~~~~~~~~~v~-~~~~--~~~d  216 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF--D-AAI--NYKTPDLAEALK-EAAP--DGID  216 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC--c-eEE--ecCChhHHHHHH-Hhcc--CCce
Confidence            578999999999999999999999999999998888766554332331  1 122  222332222222 2211  4799


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++++.|
T Consensus       217 ~vi~~~g  223 (329)
T cd05288         217 VYFDNVG  223 (329)
T ss_pred             EEEEcch
Confidence            9998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.31  E-value=0.026  Score=48.90  Aligned_cols=80  Identities=16%  Similarity=0.274  Sum_probs=55.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++.||.++|.|.++-+|+.++..|.++|++|.++.++....++..+.    .++.+..  +.++..+....       -
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~----ADIVIsa--vg~~~~v~~~~-------i  221 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQ----ADIVVAA--VGRPRLIDADW-------L  221 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhc----CCEEEEe--cCChhcccHhh-------c
Confidence            468999999999999999999999999999999997766555544432    3444432  33444333222       2


Q ss_pred             CccEEEECCCCCC
Q 023553           94 TLDIMVNNAGISG  106 (280)
Q Consensus        94 ~id~li~~ag~~~  106 (280)
                      +...+|...|+..
T Consensus       222 k~GaiVIDvgin~  234 (301)
T PRK14194        222 KPGAVVIDVGINR  234 (301)
T ss_pred             cCCcEEEEecccc
Confidence            5566777777653

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.30  E-value=0.049  Score=46.05  Aligned_cols=37  Identities=19%  Similarity=0.405  Sum_probs=32.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~   51 (280)
                      ..|++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4578999999999 9999999999999997 57777655

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.29  E-value=0.047  Score=40.97  Aligned_cols=76  Identities=13%  Similarity=0.258  Sum_probs=54.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHH-cCCeEEE-EecCc----------------------chHHHHHHHhCCCCCeEEEecCC
Q 023553           20 VALITGGATGIGESTVRLFHK-HGAKVCI-ADVQD----------------------NLGQQVCQSLGGEPDTFFCHCDV   75 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~-~g~~Vi~-~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~D~   75 (280)
                      +++|.|++|..|+.+++.+.+ .+..++. ++|+.                      ..+++..+.    .+   +..|+
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~----~D---VvIDf   74 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE----AD---VVIDF   74 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-----S---EEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc----CC---EEEEc
Confidence            689999999999999999999 5777554 55655                      122232222    23   34599


Q ss_pred             CCHHHHHHHHHHHHHHhCCccEEEECCCC
Q 023553           76 TKEEDVCSAVDLTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        76 ~~~~~~~~~~~~~~~~~g~id~li~~ag~  104 (280)
                      |.++.+...++.+.+.  ++.+++...|.
T Consensus        75 T~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   75 TNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             S-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             CChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            9999999999998887  88899998885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.29  E-value=0.036  Score=49.47  Aligned_cols=77  Identities=16%  Similarity=0.257  Sum_probs=51.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--C
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   93 (280)
                      .|++++|.|+ +++|...++.....|+. |+.+++++++.+.+ +.+..  + .++  |..+++..    +.+.+..  .
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga--~-~~i--~~~~~~~~----~~i~~~~~~~  244 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGA--T-HTV--NSSGTDPV----EAIRALTGGF  244 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCC--c-eEE--cCCCcCHH----HHHHHHhCCC
Confidence            5899999985 99999999988888996 88888888776655 33331  1 122  33333222    2222222  2


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|++|.+.|.
T Consensus       245 g~d~vid~~g~  255 (358)
T TIGR03451       245 GADVVIDAVGR  255 (358)
T ss_pred             CCCEEEECCCC
Confidence            69999998873

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.28  E-value=0.053  Score=49.29  Aligned_cols=43  Identities=23%  Similarity=0.462  Sum_probs=37.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   58 (280)
                      .+.|++++|.|++ .||+.+++.+...|++|+++++++.++...
T Consensus       199 ~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         199 MIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            4689999999987 799999999999999999999988776544

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.26  E-value=0.044  Score=44.87  Aligned_cols=38  Identities=32%  Similarity=0.496  Sum_probs=33.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~   51 (280)
                      ...+++++|+|.| .||+|..+++.|+..|. ++.+++.+
T Consensus        16 q~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HHHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            3458899999998 67999999999999997 68888877

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.25  E-value=0.032  Score=41.02  Aligned_cols=71  Identities=18%  Similarity=0.162  Sum_probs=52.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEEE
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  100 (280)
                      ++|.|.+ .+|+.+++.|.+.+.+|++++++++..+...+.     .+.++.+|.++++.++++-      ..+.+.+|.
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~-----~~~~i~gd~~~~~~l~~a~------i~~a~~vv~   68 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELREE-----GVEVIYGDATDPEVLERAG------IEKADAVVI   68 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT-----TSEEEES-TTSHHHHHHTT------GGCESEEEE
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc-----ccccccccchhhhHHhhcC------ccccCEEEE
Confidence            4677775 799999999999777999999999887766542     2668899999998764331      137788877


Q ss_pred             CCC
Q 023553          101 NAG  103 (280)
Q Consensus       101 ~ag  103 (280)
                      ...
T Consensus        69 ~~~   71 (116)
T PF02254_consen   69 LTD   71 (116)
T ss_dssp             ESS
T ss_pred             ccC
Confidence            764

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK04148 hypothetical protein; Provisional

Probab=96.25  E-value=0.01  Score=44.98  Aligned_cols=56  Identities=9%  Similarity=0.041  Sum_probs=44.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE   79 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   79 (280)
                      +++++++.|.+  .|..+|..|++.|+.|++++.++...+...+.     .+.++.+|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~-----~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL-----GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-----CCeEEECcCCCCC
Confidence            56889999998  78888999999999999999999876655432     3456778888664

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.24  E-value=0.023  Score=52.37  Aligned_cols=55  Identities=13%  Similarity=0.175  Sum_probs=40.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE   79 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   79 (280)
                      +++|.|+ |.+|+.+++.|.++|+.|++++++++..+...+..    .+.++.+|.++.+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~----~~~~~~gd~~~~~   56 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL----DVRTVVGNGSSPD   56 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc----CEEEEEeCCCCHH
Confidence            5788887 99999999999999999999999988766554311    2334445555443

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=96.23  E-value=0.077  Score=47.79  Aligned_cols=75  Identities=21%  Similarity=0.386  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|++++|.|+ +++|...++.....|++|++++++.++..+..+.+..  + .++  |..+.+.+.       +..+.+|
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa--~-~~i--~~~~~~~v~-------~~~~~~D  244 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGA--D-SFL--VTTDSQKMK-------EAVGTMD  244 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCC--c-EEE--cCcCHHHHH-------HhhCCCc
Confidence            6889999986 8999999998889999999988876654444444431  1 122  333332222       2224699


Q ss_pred             EEEECCCC
Q 023553           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|.+.|.
T Consensus       245 ~vid~~G~  252 (375)
T PLN02178        245 FIIDTVSA  252 (375)
T ss_pred             EEEECCCc
Confidence            99998873

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.18  E-value=0.026  Score=49.03  Aligned_cols=80  Identities=20%  Similarity=0.310  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++++++|+|+++++|+++++.+...|+.|+.++++.++.+.+ ....  .. .++..+  ..+...++.+.. . ...+|
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g--~~-~~~~~~--~~~~~~~~~~~~-~-~~~~d  215 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALG--AA-HVIVTD--EEDLVAEVLRIT-G-GKGVD  215 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcC--CC-EEEecC--CccHHHHHHHHh-C-CCCce
Confidence            678999999999999999999999999999999887766554 3322  11 122222  222222222211 1 12699


Q ss_pred             EEEECCCC
Q 023553           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      .+++++|.
T Consensus       216 ~vi~~~~~  223 (328)
T cd08268         216 VVFDPVGG  223 (328)
T ss_pred             EEEECCch
Confidence            99998863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.14  E-value=0.06  Score=48.29  Aligned_cols=77  Identities=22%  Similarity=0.261  Sum_probs=51.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   94 (280)
                      .|++++|.|+ +++|...++.+...|+ .|+++++++++++.+ +.+..  + .+  .|..+++.    .+++.+.. ++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga--~-~~--i~~~~~~~----~~~i~~~~~~g  259 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGA--T-AT--VNAGDPNA----VEQVRELTGGG  259 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCC--c-eE--eCCCchhH----HHHHHHHhCCC
Confidence            5889999985 8999999998888899 588888888776644 33331  1 12  23333322    22232222 36


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.+.|.
T Consensus       260 ~d~vid~~G~  269 (371)
T cd08281         260 VDYAFEMAGS  269 (371)
T ss_pred             CCEEEECCCC
Confidence            9999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02494 adenosylhomocysteinase

Probab=96.13  E-value=0.065  Score=49.25  Aligned_cols=41  Identities=22%  Similarity=0.434  Sum_probs=36.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ   56 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~   56 (280)
                      .+.||+++|.|.+ .||+.+|+.+...|++|+++++++....
T Consensus       251 ~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~~  291 (477)
T PLN02494        251 MIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICAL  291 (477)
T ss_pred             ccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhhH
Confidence            4789999999987 8999999999999999999998876543

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.11  E-value=0.058  Score=45.08  Aligned_cols=38  Identities=21%  Similarity=0.412  Sum_probs=31.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~   51 (280)
                      ...+++++|+|.| .||+|.+++..|+..|.. +.++|.+
T Consensus        16 q~~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          16 QEKLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             HHHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            3458899999998 679999999999999984 7776544

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.10  E-value=0.021  Score=43.82  Aligned_cols=44  Identities=27%  Similarity=0.335  Sum_probs=38.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ   57 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~   57 (280)
                      .+++||.++|.|.+.-.|+.++..|.++|++|..+.++...+++
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            46899999999999999999999999999999998765543333

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.07  E-value=0.039  Score=47.45  Aligned_cols=95  Identities=16%  Similarity=0.183  Sum_probs=61.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++.||+++|.|.|.-+|+.++..|.++|++|.++-+....+.+..+.    .++.+...-  .+.-+.       ..+=
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~----ADIVV~avG--~~~~i~-------~~~i  220 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQ----ADIVVAAVG--KRNVLT-------ADMV  220 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhh----CCEEEEcCC--CcCccC-------HHHc
Confidence            468999999999999999999999999999998876655444443332    344443322  121111       1122


Q ss_pred             CccEEEECCCCCCC-CCCCCCCCCHHHHH
Q 023553           94 TLDIMVNNAGISGA-PCPDIREADLSEFE  121 (280)
Q Consensus        94 ~id~li~~ag~~~~-~~~~~~~~~~~~~~  121 (280)
                      +...+|.++|+... ..+-..+.+++...
T Consensus       221 k~gavVIDVGin~~~~gkl~GDVd~~~v~  249 (285)
T PRK14189        221 KPGATVIDVGMNRDDAGKLCGDVDFAGVK  249 (285)
T ss_pred             CCCCEEEEccccccCCCCeeCCccHHHHH
Confidence            67788888887642 11344556655543

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.04  E-value=0.16  Score=46.80  Aligned_cols=77  Identities=22%  Similarity=0.335  Sum_probs=50.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++.+|+++|+|.+ ++|.++|+.|+++|+.|++.+.......  .+.+... ..+.+...+.. ..    ..       .
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~~--~~~l~~~~~gi~~~~g~~~-~~----~~-------~   66 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPER--VAQIGKMFDGLVFYTGRLK-DA----LD-------N   66 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCchh--HHHHhhccCCcEEEeCCCC-HH----HH-------h
Confidence            3678999999986 9999999999999999999987654311  1112211 12333322222 11    11       3


Q ss_pred             CccEEEECCCCCC
Q 023553           94 TLDIMVNNAGISG  106 (280)
Q Consensus        94 ~id~li~~ag~~~  106 (280)
                      ..|.+|...|+..
T Consensus        67 ~~d~vv~spgi~~   79 (445)
T PRK04308         67 GFDILALSPGISE   79 (445)
T ss_pred             CCCEEEECCCCCC
Confidence            7899999999864

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.03  E-value=0.055  Score=46.22  Aligned_cols=110  Identities=15%  Similarity=0.187  Sum_probs=65.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcC----CeEEEEecCcchHHHHHHHhCCCC----CeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           21 ALITGGATGIGESTVRLFHKHG----AKVCIADVQDNLGQQVCQSLGGEP----DTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g----~~Vi~~~r~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.|.|++|.+|..++..|+..|    ..|++++.+++.++.....+....    ...+..  .+|.+          +.+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~--~~d~~----------~~~   68 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI--TDDPY----------EAF   68 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE--CCchH----------HHh
Confidence            4689998899999999999998    689999998877666555543211    111111  11211          122


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEc
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISIC  154 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~is  154 (280)
                      ..-|++|..+|....+     ..+.   ...+..|+    -+.+.+.+.+.+. .++.+++++
T Consensus        69 ~~aDiVv~t~~~~~~~-----g~~r---~~~~~~n~----~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          69 KDADVVIITAGVGRKP-----GMGR---LDLLKRNV----PIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCCCEEEECCCCCCCc-----CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEec
Confidence            4899999999975431     2222   12223333    3344444444333 456777765

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.02  E-value=0.048  Score=47.83  Aligned_cols=64  Identities=19%  Similarity=0.218  Sum_probs=44.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH-----HHHHhCCCCCeEEEecCCCCH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ-----VCQSLGGEPDTFFCHCDVTKE   78 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~   78 (280)
                      .++.||++.|.|- |.||+++|+.+...|++|+..+|.......     ..+++-...++..+.+-++++
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~  209 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEK  209 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCch
Confidence            4799999999997 899999999999999999999885321100     011111234666666666654

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.01  E-value=0.1  Score=39.59  Aligned_cols=77  Identities=18%  Similarity=0.333  Sum_probs=50.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc-------------------ch---HHHHHHHhCCCCCeEEEecC
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD-------------------NL---GQQVCQSLGGEPDTFFCHCD   74 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~-------------------~~---~~~~~~~~~~~~~~~~~~~D   74 (280)
                      .++++|.|+ +++|..++..|+..|. ++.+++.+.                   .+   +++..+++.+..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            567777775 6899999999999998 488877552                   11   22333444555667777777


Q ss_pred             CCCHHHHHHHHHHHHHHhCCccEEEECCC
Q 023553           75 VTKEEDVCSAVDLTVEKFGTLDIMVNNAG  103 (280)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~g~id~li~~ag  103 (280)
                      + +++...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            7 3444444443       7788888764

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.96  E-value=0.059  Score=44.25  Aligned_cols=42  Identities=29%  Similarity=0.490  Sum_probs=35.5

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      |.+.+++||+++|.|| |.+|..-++.|++.|++|++++....
T Consensus         2 P~~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         2 PVFANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             CeEEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            4567899999999986 46788889999999999999987643

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.95  E-value=0.027  Score=48.23  Aligned_cols=105  Identities=16%  Similarity=0.179  Sum_probs=71.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      -+|++++|.||+|..|+-+- +||+ .||+|+..+-+.++..-+..+......+     |--++.++..++.+..-  ..
T Consensus       152 k~geTv~VSaAsGAvGql~G-Q~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~af-----NYK~e~~~~~aL~r~~P--~G  223 (343)
T KOG1196|consen  152 KKGETVFVSAASGAVGQLVG-QFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAF-----NYKEESDLSAALKRCFP--EG  223 (343)
T ss_pred             CCCCEEEEeeccchhHHHHH-HHHHhcCCEEEEecCChhhhhhhHhccCCccce-----eccCccCHHHHHHHhCC--Cc
Confidence            47899999999999998654 5555 5999999999999887776665532222     23334344444444321  38


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      ||+.|-|.|.-                            ++++.+..|.  ..|||+..+-++.
T Consensus       224 IDiYfeNVGG~----------------------------~lDavl~nM~--~~gri~~CG~ISq  257 (343)
T KOG1196|consen  224 IDIYFENVGGK----------------------------MLDAVLLNMN--LHGRIAVCGMISQ  257 (343)
T ss_pred             ceEEEeccCcH----------------------------HHHHHHHhhh--hccceEeeeeehh
Confidence            99999999842                            2456666673  4589998765544

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.93  E-value=0.036  Score=46.22  Aligned_cols=75  Identities=25%  Similarity=0.315  Sum_probs=54.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      .++|.| .|-+|+.+|+.|.+.|+.|++++++++..++..+.   ....+.+.+|-++++-++++=      ....|++|
T Consensus         2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---~~~~~~v~gd~t~~~~L~~ag------i~~aD~vv   71 (225)
T COG0569           2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---ELDTHVVIGDATDEDVLEEAG------IDDADAVV   71 (225)
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---hcceEEEEecCCCHHHHHhcC------CCcCCEEE
Confidence            455555 46799999999999999999999999987764331   235677888999887654330      13677777


Q ss_pred             ECCCC
Q 023553          100 NNAGI  104 (280)
Q Consensus       100 ~~ag~  104 (280)
                      ...|.
T Consensus        72 a~t~~   76 (225)
T COG0569          72 AATGN   76 (225)
T ss_pred             EeeCC
Confidence            77653

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.92  E-value=0.08  Score=45.50  Aligned_cols=78  Identities=19%  Similarity=0.198  Sum_probs=48.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ..+++++|.|+ +++|...++.+...|+. |+++++++++.+.. +.+..  . .++  |..+.   .+.+.++.. -..
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga--~-~~i--~~~~~---~~~~~~~~~-~~g  187 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELA-LSFGA--T-ALA--EPEVL---AERQGGLQN-GRG  187 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCC--c-Eec--Cchhh---HHHHHHHhC-CCC
Confidence            36899999986 89999999988888997 88887777665443 33331  1 111  22211   111221111 126


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.+.|.
T Consensus       188 ~d~vid~~G~  197 (280)
T TIGR03366       188 VDVALEFSGA  197 (280)
T ss_pred             CCEEEECCCC
Confidence            9999998873

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.92  E-value=0.059  Score=46.70  Aligned_cols=79  Identities=24%  Similarity=0.290  Sum_probs=54.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++||+++|.|-+.-.|+.+|+.|.+.|+.|.++. |+.. +++..+    ..++.+.  =+.+++.+....       
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~~~----~ADIVIs--avg~~~~v~~~~-------  219 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAVCR----RADILVA--AVGRPEMVKGDW-------  219 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHHHh----cCCEEEE--ecCChhhcchhe-------
Confidence            368999999999999999999999999999999994 6653 333332    2344443  344454433222       


Q ss_pred             CCccEEEECCCCCC
Q 023553           93 GTLDIMVNNAGISG  106 (280)
Q Consensus        93 g~id~li~~ag~~~  106 (280)
                      -+...+|...|+..
T Consensus       220 lk~GavVIDvGin~  233 (296)
T PRK14188        220 IKPGATVIDVGINR  233 (296)
T ss_pred             ecCCCEEEEcCCcc
Confidence            25566777778754

>PRK07574 formate dehydrogenase; Provisional

Probab=95.90  E-value=0.061  Score=48.51  Aligned_cols=40  Identities=23%  Similarity=0.237  Sum_probs=35.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      ..++.||++.|.|. |.||+.+|+.|...|++|+..+|...
T Consensus       187 ~~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~  226 (385)
T PRK07574        187 SYDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRL  226 (385)
T ss_pred             ceecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCC
Confidence            35699999999988 66999999999999999999998763

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.89  E-value=0.07  Score=48.11  Aligned_cols=37  Identities=24%  Similarity=0.454  Sum_probs=32.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~   51 (280)
                      ..+++++|+|.|+ ||+|..++..|+..|. ++.+++++
T Consensus       131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3478899999966 7999999999999998 58888877

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.87  E-value=0.11  Score=46.40  Aligned_cols=41  Identities=22%  Similarity=0.259  Sum_probs=34.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQV   58 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~   58 (280)
                      .++++||.| ++++|..+++.+...|+ +|+++++++++.+.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~  218 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA  218 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            788999997 59999999998888999 899998887765544

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.79  E-value=0.08  Score=46.98  Aligned_cols=77  Identities=25%  Similarity=0.357  Sum_probs=51.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--C
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   93 (280)
                      .|++++|.|+ +++|..+++.+...|+ .|+++++++++.+.+ ..+.  .+. +  .|..+.+.    .+++.+..  +
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~g--a~~-~--i~~~~~~~----~~~l~~~~~~~  240 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EELG--ATI-V--LDPTEVDV----VAEVRKLTGGG  240 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhC--CCE-E--ECCCccCH----HHHHHHHhCCC
Confidence            6889999985 8999999999999999 788888887776544 3332  121 1  23333322    22333332  2


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      .+|+++.+.|.
T Consensus       241 ~~d~vid~~g~  251 (351)
T cd08233         241 GVDVSFDCAGV  251 (351)
T ss_pred             CCCEEEECCCC
Confidence            49999999873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.79  E-value=0.024  Score=44.55  Aligned_cols=46  Identities=22%  Similarity=0.341  Sum_probs=35.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC   59 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   59 (280)
                      .+++||+++|.|.+.-+|+.++..|.++|++|.++....+.+++..
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~   77 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEIT   77 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccccee
Confidence            4689999999999999999999999999999998877665554443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.77  E-value=0.046  Score=47.62  Aligned_cols=77  Identities=29%  Similarity=0.371  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      .+.+++|+|+++++|.++++.+...|++|+.++++.+..+.+ +.+..  .. .+  |..+.+....    +.+..  .+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~--~~-~~--~~~~~~~~~~----~~~~~~~~~  211 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGA--DV-AV--DYTRPDWPDQ----VREALGGGG  211 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCC--CE-EE--ecCCccHHHH----HHHHcCCCC
Confidence            578999999999999999999999999999999888776554 33331  11 22  3333332222    22222  26


Q ss_pred             ccEEEECCC
Q 023553           95 LDIMVNNAG  103 (280)
Q Consensus        95 id~li~~ag  103 (280)
                      +|+++++.|
T Consensus       212 ~d~vl~~~g  220 (324)
T cd08244         212 VTVVLDGVG  220 (324)
T ss_pred             ceEEEECCC
Confidence            999999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.77  E-value=0.03  Score=48.19  Aligned_cols=39  Identities=23%  Similarity=0.388  Sum_probs=35.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      .+++||.++|.|.+.-+|+.++..|...|++|.++.++.
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            368999999999999999999999999999999887754

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.76  E-value=0.11  Score=46.04  Aligned_cols=44  Identities=30%  Similarity=0.335  Sum_probs=35.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHh
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~   62 (280)
                      .|++++|.| .+++|..+++.....|++ |+.+++++++.+.+ +.+
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~  204 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSL  204 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc
Confidence            688999997 599999999998899997 67788888776644 444

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.76  E-value=0.067  Score=48.74  Aligned_cols=85  Identities=13%  Similarity=0.105  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecCcchHHHHHHHhCC-----CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA---KVCIADVQDNLGQQVCQSLGG-----EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~---~Vi~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .|.+++|.|+++++|...++.+...|+   +|+++++++++++...+....     .....++  |..+.++..+.+.++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i--~~~~~~~~~~~v~~~  252 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYV--NPATIDDLHATLMEL  252 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEE--CCCccccHHHHHHHH
Confidence            578999999999999999887777654   699999998887765543221     1111222  333222232222222


Q ss_pred             HHHhCCccEEEECCCC
Q 023553           89 VEKFGTLDIMVNNAGI  104 (280)
Q Consensus        89 ~~~~g~id~li~~ag~  104 (280)
                      .. -.++|++|.+.|.
T Consensus       253 t~-g~g~D~vid~~g~  267 (410)
T cd08238         253 TG-GQGFDDVFVFVPV  267 (410)
T ss_pred             hC-CCCCCEEEEcCCC
Confidence            11 1268999998763

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.75  E-value=0.087  Score=43.50  Aligned_cols=38  Identities=18%  Similarity=0.367  Sum_probs=33.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~   51 (280)
                      ...|+.++|+|.|+ ||+|..++..|+..|.. +.+++.+
T Consensus        23 q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         23 LEKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34588999999995 89999999999999986 8888877

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.75  E-value=0.041  Score=50.14  Aligned_cols=41  Identities=20%  Similarity=0.400  Sum_probs=36.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ   56 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~   56 (280)
                      .+.||+++|.|. |.||+.+++.+...|++|+++++++.+..
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            478999999997 68999999999999999999998876543

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.74  E-value=0.06  Score=47.26  Aligned_cols=38  Identities=24%  Similarity=0.266  Sum_probs=34.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      .++.||++.|.|- |.||+++|+.+...|++|+..++..
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~  180 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKG  180 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCc
Confidence            4799999999997 8999999999999999999987753

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.74  E-value=0.11  Score=46.96  Aligned_cols=90  Identities=18%  Similarity=0.322  Sum_probs=62.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +|++|++||.|+ |-+|.-+|++|+++| ..|+++.|+.++.+++++.+..         +....+       ++.+...
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~---------~~~~l~-------el~~~l~  237 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGA---------EAVALE-------ELLEALA  237 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCC---------eeecHH-------HHHHhhh
Confidence            389999999997 468999999999999 5688999999999988887761         112222       2223334


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhh
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN  127 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n  127 (280)
                      ..|++|.+.|-..+      -++.+.+++.+...
T Consensus       238 ~~DvVissTsa~~~------ii~~~~ve~a~~~r  265 (414)
T COG0373         238 EADVVISSTSAPHP------IITREMVERALKIR  265 (414)
T ss_pred             hCCEEEEecCCCcc------ccCHHHHHHHHhcc
Confidence            78888888765433      24445555554443

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.73  E-value=0.083  Score=46.82  Aligned_cols=39  Identities=18%  Similarity=0.215  Sum_probs=35.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      .++.||++.|.|. |.||+.+|+.|...|++|++.+|+..
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            4799999999998 99999999999999999999998754

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.73  E-value=0.2  Score=44.11  Aligned_cols=75  Identities=21%  Similarity=0.367  Sum_probs=50.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .+++++|.| ++++|.++++.+...|++|+.+++++++.+.+ +++..  + .++  |..+.+ ..+   .+.+. +.+|
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~--~-~~i--~~~~~~-~~~---~~~~~-~~~d  230 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGA--H-HYI--DTSKED-VAE---ALQEL-GGAK  230 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCC--c-EEe--cCCCcc-HHH---HHHhc-CCCC
Confidence            578999999 79999999998889999999999987765554 44432  1 122  222222 221   22221 4689


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++.+.|
T Consensus       231 ~vi~~~g  237 (333)
T cd08296         231 LILATAP  237 (333)
T ss_pred             EEEECCC
Confidence            9998765

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=95.73  E-value=0.86  Score=39.12  Aligned_cols=238  Identities=13%  Similarity=0.052  Sum_probs=123.9

Q ss_pred             CCcEEEEEcCCChHHHHHH--HHHHHcCCeEEEEec--Ccc----h------HHHHHHHhCCCC-CeEEEecCCCCHHHH
Q 023553           17 VGRVALITGGATGIGESTV--RLFHKHGAKVCIADV--QDN----L------GQQVCQSLGGEP-DTFFCHCDVTKEEDV   81 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia--~~l~~~g~~Vi~~~r--~~~----~------~~~~~~~~~~~~-~~~~~~~D~~~~~~~   81 (280)
                      -.|+|||.|+|+|.|.+.-  -.|- .|++.+.+.-  ...    .      .....+..+..+ ...-+..|.-+.+--
T Consensus        40 gPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k  118 (398)
T COG3007          40 GPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMK  118 (398)
T ss_pred             CCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHH
Confidence            4689999999999987643  2333 4666655432  110    0      011112222222 344567888887777


Q ss_pred             HHHHHHHHHHhCCccEEEECCCCCCCCC-C-------------------------------CCCCCCHHHHHHHhhhhhh
Q 023553           82 CSAVDLTVEKFGTLDIMVNNAGISGAPC-P-------------------------------DIREADLSEFEKVFDINVK  129 (280)
Q Consensus        82 ~~~~~~~~~~~g~id~li~~ag~~~~~~-~-------------------------------~~~~~~~~~~~~~~~~n~~  129 (280)
                      ...++.+++.+|++|.+|+.-.-....+ +                               .+...+.+++..+..  ++
T Consensus       119 ~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~--VM  196 (398)
T COG3007         119 QKVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVA--VM  196 (398)
T ss_pred             HHHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHH--hh
Confidence            8888999999999999999854322100 0                               111223334433322  23


Q ss_pred             hHH---HHHHHHHHhcccCCCceEEEEccccccccC--CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceecc
Q 023553          130 GVF---HGMKHAARIMIPQTKGTIISICSVAGAIGG--LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATG  204 (280)
Q Consensus       130 ~~~---~l~~~~~~~l~~~~~g~iv~isS~~~~~~~--~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~  204 (280)
                      |--   ..+++++..=....+.+-+-.|-+......  .-.+.-+.+|.=|+.-+..+...|++.|-..++.-.-.+-|.
T Consensus       197 GGeDWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKavVTq  276 (398)
T COG3007         197 GGEDWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAVVTQ  276 (398)
T ss_pred             CcchHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeeehHHHHhh
Confidence            221   234555443222223344433332222221  223567889999999999999999887656555544455554


Q ss_pred             ccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          205 LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      -........ ..      ...+++-+    ..-+.-|-+.+-+..|.++.  -..|+.+.+|....
T Consensus       277 ASsaIP~~p-lY------la~lfkvM----Kekg~HEgcIeQi~rlfse~--ly~g~~~~~D~e~r  329 (398)
T COG3007         277 ASSAIPMMP-LY------LAILFKVM----KEKGTHEGCIEQIDRLFSEK--LYSGSKIQLDDEGR  329 (398)
T ss_pred             hhhcccccc-HH------HHHHHHHH----HHcCcchhHHHHHHHHHHHH--hhCCCCCCcCcccc
Confidence            432222111 10      00011110    12234466666666666542  22366666665543

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.67  E-value=0.063  Score=46.78  Aligned_cols=78  Identities=14%  Similarity=0.111  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      +|.+++|.|+++++|.++++.....|++|+.+.++.+..+.+.+ ..  .+ .++  +..+.+..    +.+.+..  .+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g--~~-~~~--~~~~~~~~----~~i~~~~~~~~  208 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LG--IG-PVV--STEQPGWQ----DKVREAAGGAP  208 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cC--CC-EEE--cCCCchHH----HHHHHHhCCCC
Confidence            58899999999999999999999999999999888877665543 32  12 122  22222222    2222222  26


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|+++.+.|.
T Consensus       209 ~d~v~d~~g~  218 (324)
T cd08292         209 ISVALDSVGG  218 (324)
T ss_pred             CcEEEECCCC
Confidence            9999998873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.66  E-value=0.2  Score=44.28  Aligned_cols=88  Identities=17%  Similarity=0.185  Sum_probs=56.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH------HHHhCCCCCeEEEecCCCCHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV------CQSLGGEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .++.|+++.|.|. |.||+++|+.|...|++|++.++++......      .+++-...++.++.+-.+.. ...-+-+.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~-t~~li~~~  219 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE-SYHLFDKA  219 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH-HHHHHhHH
Confidence            4689999999976 6699999999999999999999886532221      11122235677777766543 11122233


Q ss_pred             HHHHhCCccEEEECCCC
Q 023553           88 TVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~  104 (280)
                      ..+.. +.+.++.|++-
T Consensus       220 ~l~~m-k~gavlIN~aR  235 (330)
T PRK12480        220 MFDHV-KKGAILVNAAR  235 (330)
T ss_pred             HHhcC-CCCcEEEEcCC
Confidence            33333 45666666654

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.66  E-value=0.055  Score=48.53  Aligned_cols=79  Identities=16%  Similarity=0.222  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~   94 (280)
                      .|.+++|+|+ +++|...++.....|+ +|+.+++++++++.+ +.+..  .. .+  |..+ .+++.+.+.++..  ++
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga--~~-~i--~~~~~~~~~~~~v~~~~~--~g  255 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGA--TD-CV--NPNDYDKPIQEVIVEITD--GG  255 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCC--Ce-EE--cccccchhHHHHHHHHhC--CC
Confidence            5889999985 8999999998888899 699999988876655 33332  11 12  3332 1222222222222  37


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       256 ~d~vid~~G~  265 (368)
T TIGR02818       256 VDYSFECIGN  265 (368)
T ss_pred             CCEEEECCCC
Confidence            9999999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=95.66  E-value=0.2  Score=44.76  Aligned_cols=75  Identities=20%  Similarity=0.362  Sum_probs=50.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|.+++|.| ++++|...++.....|++|+++.+++++.....+.+..  .. .+  +-.+.+.+.       +..+.+|
T Consensus       180 ~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga--~~-~i--~~~~~~~~~-------~~~~~~D  246 (357)
T PLN02514        180 SGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGA--DD-YL--VSSDAAEMQ-------EAADSLD  246 (357)
T ss_pred             CCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCC--cE-Ee--cCCChHHHH-------HhcCCCc
Confidence            688999995 59999999998888899999888887766555554432  21 11  222332221       1224699


Q ss_pred             EEEECCCC
Q 023553           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|.+.|.
T Consensus       247 ~vid~~g~  254 (357)
T PLN02514        247 YIIDTVPV  254 (357)
T ss_pred             EEEECCCc
Confidence            99998873

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.65  E-value=0.12  Score=44.58  Aligned_cols=95  Identities=12%  Similarity=0.114  Sum_probs=60.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++.||.++|.|-|.-+|+.++..|..+|++|.++.+....+++..+.    .++.+...  -.+.-+..  +     +=
T Consensus       155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~----ADIvi~av--G~p~~v~~--~-----~v  221 (285)
T PRK10792        155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVRN----ADLLVVAV--GKPGFIPG--E-----WI  221 (285)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHhh----CCEEEEcC--CCcccccH--H-----Hc
Confidence            468999999999999999999999999999999987766555544332    23333322  12221111  1     12


Q ss_pred             CccEEEECCCCCCCC-CCCCCCCCHHHHH
Q 023553           94 TLDIMVNNAGISGAP-CPDIREADLSEFE  121 (280)
Q Consensus        94 ~id~li~~ag~~~~~-~~~~~~~~~~~~~  121 (280)
                      +.+.+|-.+|+.... .+...+.+++...
T Consensus       222 k~gavVIDvGin~~~~gk~~GDvd~~~~~  250 (285)
T PRK10792        222 KPGAIVIDVGINRLEDGKLVGDVEFETAA  250 (285)
T ss_pred             CCCcEEEEcccccccCCCcCCCcCHHHHH
Confidence            667777778765421 1334455555443

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.65  E-value=0.11  Score=46.35  Aligned_cols=38  Identities=21%  Similarity=0.357  Sum_probs=32.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~   51 (280)
                      ...|++++|+|.|+ ||+|..++..|+..|.. +.+++.+
T Consensus        23 q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34588999999988 89999999999999974 7777765

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.65  E-value=0.13  Score=39.43  Aligned_cols=31  Identities=23%  Similarity=0.438  Sum_probs=26.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023553           20 VALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~   51 (280)
                      +++|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            3788887 8999999999999998 58888765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=95.64  E-value=0.2  Score=44.26  Aligned_cols=78  Identities=24%  Similarity=0.316  Sum_probs=50.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ..+++++|.|+++++|.++++.....|++|+.+. +.++.+.+ +.+..  . .++  +..+.+.... +.+...  +++
T Consensus       153 ~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~-~~~g~--~-~v~--~~~~~~~~~~-l~~~~~--~~~  222 (339)
T cd08249         153 SKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLV-KSLGA--D-AVF--DYHDPDVVED-IRAATG--GKL  222 (339)
T ss_pred             CCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHH-HhcCC--C-EEE--ECCCchHHHH-HHHhcC--CCe
Confidence            4789999999999999999999999999988877 44544444 43331  1 122  2222222222 222222  479


Q ss_pred             cEEEECCC
Q 023553           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |+++++.|
T Consensus       223 d~vl~~~g  230 (339)
T cd08249         223 RYALDCIS  230 (339)
T ss_pred             eEEEEeec
Confidence            99998876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.61  E-value=0.14  Score=45.02  Aligned_cols=114  Identities=20%  Similarity=0.219  Sum_probs=67.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCC-C---CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGG-E---PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~-~---~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.+++.|+|+ |.+|..++..++..| +.+++++.+++..+...-.+.. .   .....+.. .++.+.           
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d~~~-----------   70 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNNYED-----------   70 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCCHHH-----------
Confidence            5678999997 889999999999998 7899999987654322211111 0   10011111 123222           


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEcc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICS  155 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS  155 (280)
                      +..-|++|..+|....+     ..+.   .+.+..|.    -+.+.+.+.+.+. .++.+++++-
T Consensus        71 l~~ADiVVitag~~~~~-----g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         71 IKDSDVVVITAGVQRKE-----EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             hCCCCEEEECCCCCCCC-----CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence            13789999999975431     2333   33444555    3455555555444 3566777764

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.61  E-value=0.072  Score=46.53  Aligned_cols=77  Identities=17%  Similarity=0.216  Sum_probs=51.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .+++++|.|+++++|.++++.....|++|+.+.+++++.+.+ +.+..  .. +  .|..+. . .+.+....  -+.+|
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~--~~-v--~~~~~~-~-~~~~~~~~--~~~~d  215 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGA--KE-V--IPREEL-Q-EESIKPLE--KQRWA  215 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCC--CE-E--EcchhH-H-HHHHHhhc--cCCcC
Confidence            367999999999999999999999999999999988876655 33331  11 1  122222 1 11122221  13689


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++.+.|
T Consensus       216 ~vld~~g  222 (326)
T cd08289         216 GAVDPVG  222 (326)
T ss_pred             EEEECCc
Confidence            9998876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.59  E-value=0.085  Score=46.18  Aligned_cols=79  Identities=24%  Similarity=0.309  Sum_probs=52.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .++.+++|.|+++++|.++++.....|+.|+.+.++.+..+.+ +.+..  + .++  +..+. +..+.+.....  +.+
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~--~-~v~--~~~~~-~~~~~~~~~~~--~~v  208 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGC--D-RPI--NYKTE-DLGEVLKKEYP--KGV  208 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCC--c-eEE--eCCCc-cHHHHHHHhcC--CCC
Confidence            3688999999999999999998888999999998887766554 33331  1 122  22222 22222222221  369


Q ss_pred             cEEEECCC
Q 023553           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |.++++.|
T Consensus       209 d~v~~~~g  216 (329)
T cd08250         209 DVVYESVG  216 (329)
T ss_pred             eEEEECCc
Confidence            99998876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.58  E-value=0.068  Score=49.31  Aligned_cols=77  Identities=22%  Similarity=0.318  Sum_probs=58.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      +..+.++|.|+ |.+|+.+++.|.+.|+.|++++++++..+.+.+..   ..+.++..|.++++.+.+.-      ..+.
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~---~~~~~i~gd~~~~~~L~~~~------~~~a  298 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL---PNTLVLHGDGTDQELLEEEG------IDEA  298 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC---CCCeEEECCCCCHHHHHhcC------CccC
Confidence            45789999999 99999999999999999999999988776665543   23557788999887653221      1367


Q ss_pred             cEEEECC
Q 023553           96 DIMVNNA  102 (280)
Q Consensus        96 d~li~~a  102 (280)
                      |.+|...
T Consensus       299 ~~vi~~~  305 (453)
T PRK09496        299 DAFIALT  305 (453)
T ss_pred             CEEEECC
Confidence            7777554

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.58  E-value=0.056  Score=42.36  Aligned_cols=43  Identities=21%  Similarity=0.385  Sum_probs=32.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ   57 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~   57 (280)
                      ..+.||+++|.| -|.+|+.+|+.|...|++|+++..++-..-+
T Consensus        19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alq   61 (162)
T PF00670_consen   19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQ   61 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH
T ss_pred             eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHH
Confidence            458999999997 5789999999999999999999998865443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.55  E-value=0.3  Score=40.37  Aligned_cols=75  Identities=12%  Similarity=0.141  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC--------------CCCCeEEEecCCCCHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--------------GEPDTFFCHCDVTKEEDVC   82 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~D~~~~~~~~   82 (280)
                      .+.+||+.|++.|   .=+..|+++|++|+.++.++..++.+.++.+              ...++.++.+|+.+...  
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--  108 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA--  108 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence            6789999999887   3477889999999999999988876544321              12357778888876532  


Q ss_pred             HHHHHHHHHhCCccEEEECCC
Q 023553           83 SAVDLTVEKFGTLDIMVNNAG  103 (280)
Q Consensus        83 ~~~~~~~~~~g~id~li~~ag  103 (280)
                             +..++.|.++-.+.
T Consensus       109 -------~~~~~fD~i~D~~~  122 (213)
T TIGR03840       109 -------ADLGPVDAVYDRAA  122 (213)
T ss_pred             -------ccCCCcCEEEechh
Confidence                   01146777776554

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.52  E-value=0.085  Score=47.25  Aligned_cols=80  Identities=13%  Similarity=0.165  Sum_probs=53.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH-HHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE-EDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   93 (280)
                      ..|.+++|.|+ +++|...++.+...|+ .|+.+++++++++.+ +.+..  + .++  |..+. ++..+.+.++..  +
T Consensus       185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa--~-~~i--~~~~~~~~~~~~v~~~~~--~  255 (368)
T cd08300         185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGA--T-DCV--NPKDHDKPIQQVLVEMTD--G  255 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCC--C-EEE--cccccchHHHHHHHHHhC--C
Confidence            35899999975 8999999999999999 699999998877654 34431  2 122  33332 233333333322  3


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|++|.+.|.
T Consensus       256 g~d~vid~~g~  266 (368)
T cd08300         256 GVDYTFECIGN  266 (368)
T ss_pred             CCcEEEECCCC
Confidence            79999998873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02827 Alcohol dehydrogenase-like

Probab=95.51  E-value=0.16  Score=45.71  Aligned_cols=80  Identities=18%  Similarity=0.197  Sum_probs=51.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH-HHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE-EDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   93 (280)
                      .+|++++|.|+ +++|...++.....|+. |+++++++++.+.+ +.+..  + .++  |..+. ++..+.+.++..  +
T Consensus       192 ~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~lGa--~-~~i--~~~~~~~~~~~~v~~~~~--~  262 (378)
T PLN02827        192 SKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTFGV--T-DFI--NPNDLSEPIQQVIKRMTG--G  262 (378)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCC--c-EEE--cccccchHHHHHHHHHhC--C
Confidence            35899999985 89999999988888985 77777777765544 44431  1 122  33221 233333333221  3


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      .+|++|.+.|.
T Consensus       263 g~d~vid~~G~  273 (378)
T PLN02827        263 GADYSFECVGD  273 (378)
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=95.47  E-value=0.13  Score=46.56  Aligned_cols=73  Identities=12%  Similarity=0.149  Sum_probs=51.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +.|+++|+|++ .+|+.+++.+.+.|++|++++.++......   ..   + .++..|..|.+.+.+++++     .++|
T Consensus        11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~a---d-~~~~~~~~d~~~l~~~~~~-----~~id   77 (395)
T PRK09288         11 SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---VA---H-RSHVIDMLDGDALRAVIER-----EKPD   77 (395)
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---hh---h-heEECCCCCHHHHHHHHHH-----hCCC
Confidence            45689999876 589999999999999999998876432211   11   1 1355678888777666553     2789


Q ss_pred             EEEECC
Q 023553           97 IMVNNA  102 (280)
Q Consensus        97 ~li~~a  102 (280)
                      .++...
T Consensus        78 ~vi~~~   83 (395)
T PRK09288         78 YIVPEI   83 (395)
T ss_pred             EEEEee
Confidence            888654

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.47  E-value=0.14  Score=45.05  Aligned_cols=120  Identities=17%  Similarity=0.238  Sum_probs=68.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHH-HHHHhCC---C-CCeEEEecCCCCHHHHHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQ-VCQSLGG---E-PDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~-~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+.+++.|.| +|.+|..++..++..|. .|++++.+++..+. ..+..+.   . ....+..  .+|.++         
T Consensus         4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~---------   71 (321)
T PTZ00082          4 IKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED---------   71 (321)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH---------
Confidence            4567899999 48899999999999994 89999998875422 1111111   1 1122221  122222         


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSV  156 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~  156 (280)
                        +..-|++|+.+|....+ .. .+.+++. .+.+..|+    .+.+.+.+.+.+.. .+.++++|-.
T Consensus        72 --l~~aDiVI~tag~~~~~-~~-~~~~~~r-~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP  130 (321)
T PTZ00082         72 --IAGSDVVIVTAGLTKRP-GK-SDKEWNR-DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNP  130 (321)
T ss_pred             --hCCCCEEEECCCCCCCC-CC-CcCCCCH-HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCc
Confidence              23889999999986532 11 1111111 33444454    34556666654443 4567777643

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.47  E-value=0.088  Score=36.65  Aligned_cols=36  Identities=25%  Similarity=0.558  Sum_probs=31.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEec
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKH-GAKVCIADV   50 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r   50 (280)
                      .++++|+++|.|+ ++.|+.+++.|.+. +..|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4588999999999 99999999999998 566777766

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.44  E-value=0.26  Score=43.25  Aligned_cols=116  Identities=16%  Similarity=0.188  Sum_probs=65.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      ++.|+|++|.+|..+|..|+..+.  .+++++.++ ...+..+..+......+..+.-.+  +       ..+.+..-|+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~g~a~DL~~~~~~~~i~~~~~~~--~-------~~~~~~daDi   70 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AAGVAADLSHIPTAASVKGFSGEE--G-------LENALKGADV   70 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-CcEEEchhhcCCcCceEEEecCCC--c-------hHHHcCCCCE
Confidence            478999999999999999998875  589999876 222222222211111111111011  0       1122358999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEcccc
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVA  157 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~  157 (280)
                      +|..||....+     ..+.   .+.+..|+.    +++.+.+.+.+. .++.++++|--.
T Consensus        71 vvitaG~~~~~-----g~~R---~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        71 VVIPAGVPRKP-----GMTR---DDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             EEEeCCCCCCC-----CccH---HHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence            99999975321     2333   334555655    444555554433 356777666543

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.44  E-value=0.083  Score=46.46  Aligned_cols=37  Identities=24%  Similarity=0.390  Sum_probs=34.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~   51 (280)
                      .++.||++.|.|- |.||+++|+.+...|++|+..+|.
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            4699999999997 899999999999999999998875

>PRK08223 hypothetical protein; Validated

Probab=95.43  E-value=0.1  Score=44.98  Aligned_cols=39  Identities=28%  Similarity=0.325  Sum_probs=32.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQD   52 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   52 (280)
                      +..|++.+|+|.|+ ||+|..++..|+..|.. +.++|.+.
T Consensus        22 Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         22 QQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            34588999999987 59999999999999974 77777653

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.42  E-value=0.081  Score=45.51  Aligned_cols=94  Identities=17%  Similarity=0.248  Sum_probs=57.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++.||.++|.|-|+-.|+.++..|.++|++|.++-...+.+++..+.    .++.+..  +.++..++...       -
T Consensus       154 i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~----ADIVI~a--vg~~~~v~~~~-------i  220 (284)
T PRK14179        154 VELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARK----ADILVVA--IGRGHFVTKEF-------V  220 (284)
T ss_pred             CCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhh----CCEEEEe--cCccccCCHHH-------c
Confidence            468999999999999999999999999999999874433333333222    3333332  22333222211       2


Q ss_pred             CccEEEECCCCCCC-CCCCCCCCCHHHH
Q 023553           94 TLDIMVNNAGISGA-PCPDIREADLSEF  120 (280)
Q Consensus        94 ~id~li~~ag~~~~-~~~~~~~~~~~~~  120 (280)
                      +...+|-..|+... ..+-..+.+++..
T Consensus       221 k~GavVIDvgin~~~~gkl~GDVdf~~v  248 (284)
T PRK14179        221 KEGAVVIDVGMNRDENGKLIGDVDFDEV  248 (284)
T ss_pred             cCCcEEEEecceecCCCCeecCccHHHH
Confidence            55566666776542 1133445665554

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=95.41  E-value=0.15  Score=44.99  Aligned_cols=38  Identities=13%  Similarity=0.088  Sum_probs=33.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHH-HcCCeEEEEecCc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFH-KHGAKVCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~-~~g~~Vi~~~r~~   52 (280)
                      .+|.||++.|.|- |.||+++++.+. ..|++|+..++..
T Consensus       141 ~~L~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~~  179 (323)
T PRK15409        141 TDVHHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARRH  179 (323)
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCCC
Confidence            4699999999997 899999999997 8899999888763

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.40  E-value=0.1  Score=45.38  Aligned_cols=78  Identities=17%  Similarity=0.213  Sum_probs=52.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--C
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   93 (280)
                      .+|.+++|.|+++++|.++++.+...|++|+++.++.++.+.+ +.+.  .+. +  .+..+.+...    .+.+..  .
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--~~~-~--~~~~~~~~~~----~~~~~~~~~  206 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALG--ADE-V--IDSSPEDLAQ----RVKEATGGA  206 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcC--CCE-E--ecccchhHHH----HHHHHhcCC
Confidence            3678999999999999999999999999999998888765554 3332  111 1  1222222222    222222  3


Q ss_pred             CccEEEECCC
Q 023553           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~id~li~~ag  103 (280)
                      ++|.++.+.|
T Consensus       207 ~~d~vl~~~g  216 (323)
T cd05282         207 GARLALDAVG  216 (323)
T ss_pred             CceEEEECCC
Confidence            6999999886

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.40  E-value=0.41  Score=41.96  Aligned_cols=147  Identities=18%  Similarity=0.143  Sum_probs=78.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      ++.|+|++|.+|..+|..|+..+.  .+++++.+ ....+..+..+.........+.-.+  +       ..+.+..-|+
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~g~alDL~~~~~~~~i~~~~~~~--~-------~y~~~~daDi   71 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTPGVAADLSHINTPAKVTGYLGPE--E-------LKKALKGADV   71 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccceeehHhHhCCCcceEEEecCCC--c-------hHHhcCCCCE
Confidence            688999999999999999998874  68999987 2222222222211111111110001  0       0112248999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc------------ccCCCC
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA------------IGGLGP  165 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~------------~~~~~~  165 (280)
                      +|..||....+     ..+.   .+.++.|..-...+.+.+.++   ..++.+++++--.-.            .+.|..
T Consensus        72 vvitaG~~~k~-----g~tR---~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~~  140 (310)
T cd01337          72 VVIPAGVPRKP-----GMTR---DDLFNINAGIVRDLATAVAKA---CPKALILIISNPVNSTVPIAAEVLKKAGVYDPK  140 (310)
T ss_pred             EEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCchhhHHHHHHHHHHHhcCCCHH
Confidence            99999985321     2333   345555655544444444443   335777777654311            122222


Q ss_pred             ccchhhHHHHHHHHHHHHHHHC
Q 023553          166 HAYTGSKHAVLGLNKNVAAELG  187 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~  187 (280)
                      ...+.+-.=-..|-..+++++.
T Consensus       141 rviG~~~LDs~R~~~~la~~l~  162 (310)
T cd01337         141 RLFGVTTLDVVRANTFVAELLG  162 (310)
T ss_pred             HEEeeechHHHHHHHHHHHHhC
Confidence            3444432222356667777764

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.37  E-value=0.086  Score=46.42  Aligned_cols=37  Identities=16%  Similarity=0.250  Sum_probs=33.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      ++++++|.|+++++|.++++.....|++|+.+.++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            6899999999999999999999999999988887763

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PLN02740 Alcohol dehydrogenase-like

Probab=95.35  E-value=0.092  Score=47.32  Aligned_cols=80  Identities=19%  Similarity=0.190  Sum_probs=52.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH-HHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE-EDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   93 (280)
                      ..|++++|.|+ +++|...++.+...|+ .|+++++++++++.+ +.+..  + .++  |..+. ++..+.+.++..  +
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga--~-~~i--~~~~~~~~~~~~v~~~~~--~  267 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMGI--T-DFI--NPKDSDKPVHERIREMTG--G  267 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcCC--c-EEE--ecccccchHHHHHHHHhC--C
Confidence            36889999985 8999999999888999 599999988876655 33331  1 122  33322 122222332221  2


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      .+|++|.++|.
T Consensus       268 g~dvvid~~G~  278 (381)
T PLN02740        268 GVDYSFECAGN  278 (381)
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.31  E-value=0.2  Score=40.99  Aligned_cols=70  Identities=17%  Similarity=0.172  Sum_probs=47.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-HHHHHHHhCC------------CCCeEEEecCCCCHHHHHHHHHH
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGG------------EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~------------~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      ....||+|-||.+++++|++.|+.|++.+|+.++ ++...+.+..            ..++.++..-   -+.+..++++
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHHHH
Confidence            4567889999999999999999999998766553 4444333321            1455555443   3456666778


Q ss_pred             HHHHhC
Q 023553           88 TVEKFG   93 (280)
Q Consensus        88 ~~~~~g   93 (280)
                      +.+.++
T Consensus        80 l~~~~~   85 (211)
T COG2085          80 LRDALG   85 (211)
T ss_pred             HHHHhC
Confidence            877664

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.29  E-value=0.16  Score=44.01  Aligned_cols=77  Identities=22%  Similarity=0.354  Sum_probs=51.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .+|.+++|.|+++++|.++++.....|++|+.+.++++..+.+ ..+..  .. ++. +  +. +..   +.+.+.-.++
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~--~~-~~~-~--~~-~~~---~~i~~~~~~~  209 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGA--DE-VVI-D--DG-AIA---EQLRAAPGGF  209 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCC--cE-EEe-c--Cc-cHH---HHHHHhCCCc
Confidence            3688999999999999999999999999999998887765544 33331  11 111 1  11 111   1222222479


Q ss_pred             cEEEECCC
Q 023553           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |.++++.|
T Consensus       210 d~vl~~~~  217 (320)
T cd08243         210 DKVLELVG  217 (320)
T ss_pred             eEEEECCC
Confidence            99999876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.29  E-value=0.073  Score=45.97  Aligned_cols=42  Identities=29%  Similarity=0.394  Sum_probs=37.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   58 (280)
                      ++++++|+|+++++|.++++.+...|+.|+.+.++.+..+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            688999999999999999999999999999998887665544

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.28  E-value=0.14  Score=44.06  Aligned_cols=96  Identities=14%  Similarity=0.186  Sum_probs=59.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++.||.++|.|.|.-+|+.++..|..+|++|.++.+....+++..+.    .++.+...-  .+.-+       ...+=
T Consensus       160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~----ADIvv~AvG--~p~~i-------~~~~v  226 (287)
T PRK14176        160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLD----ADILVVATG--VKHLI-------KADMV  226 (287)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhh----CCEEEEccC--Ccccc-------CHHHc
Confidence            468999999999999999999999999999999887655545443332    334333221  11111       01112


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEK  122 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~  122 (280)
                      +.+.+|-.+|+.....+-..+.+++...+
T Consensus       227 k~gavVIDvGin~~~gkl~GDvd~~~~~~  255 (287)
T PRK14176        227 KEGAVIFDVGITKEEDKVYGDVDFENVIK  255 (287)
T ss_pred             CCCcEEEEecccccCCCccCCcCHHHHHh
Confidence            56677777776431113344566555433

>PRK08328 hypothetical protein; Provisional

Probab=95.26  E-value=0.17  Score=42.38  Aligned_cols=38  Identities=18%  Similarity=0.341  Sum_probs=31.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   52 (280)
                      ..+++++|+|.|++ |+|.+++..|+..|.. +.+++.+.
T Consensus        23 ~~L~~~~VlIiG~G-GlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         23 EKLKKAKVAVVGVG-GLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHHhCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            45788999999875 9999999999999975 77887654

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.24  E-value=0.13  Score=44.29  Aligned_cols=91  Identities=13%  Similarity=0.164  Sum_probs=60.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEec---CCCCHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC---DVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~---D~~~~~~~~~~~~~~~~   90 (280)
                      .+++||.++|.|.|.-+|+.++..|.+++++|.++-+....+.+..+.    .++.+...   .+-..+.          
T Consensus       154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~----ADIvIsAvGkp~~i~~~~----------  219 (282)
T PRK14180        154 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTK----ADILIVAVGKPNFITADM----------  219 (282)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhh----cCEEEEccCCcCcCCHHH----------
Confidence            468999999999999999999999999999999886655544443332    34444322   2222222          


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHH
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEF  120 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~  120 (280)
                        =+.+.+|-.+|+.....+-..+.+++..
T Consensus       220 --vk~gavVIDvGin~~~gkl~GDvd~~~v  247 (282)
T PRK14180        220 --VKEGAVVIDVGINHVDGKIVGDVDFAAV  247 (282)
T ss_pred             --cCCCcEEEEecccccCCceeCCcCHHHH
Confidence              2667778888875421244456665554

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.24  E-value=0.061  Score=46.26  Aligned_cols=42  Identities=19%  Similarity=0.304  Sum_probs=36.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~   55 (280)
                      .++.||.++|.|.+.-+|+.++..|.++|++|.++......+
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l  194 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDL  194 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence            468999999999999999999999999999998875444333

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.19  E-value=0.11  Score=44.71  Aligned_cols=77  Identities=19%  Similarity=0.260  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      +|++++|.|+++++|.++++.....|+.|+.+.+++++.+.+ ..+.  ... ++..  .+....    +.+.+..  ..
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--~~~-~~~~--~~~~~~----~~~~~~~~~~~  205 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAG--ADH-VINY--RDEDFV----ERVREITGGRG  205 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCC--CCE-EEeC--CchhHH----HHHHHHcCCCC
Confidence            689999999999999999999999999999998887766554 3332  121 2211  222222    2222222  26


Q ss_pred             ccEEEECCC
Q 023553           95 LDIMVNNAG  103 (280)
Q Consensus        95 id~li~~ag  103 (280)
                      +|.++++.|
T Consensus       206 ~d~vl~~~~  214 (320)
T cd05286         206 VDVVYDGVG  214 (320)
T ss_pred             eeEEEECCC
Confidence            999998876

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.17  E-value=0.12  Score=45.64  Aligned_cols=79  Identities=30%  Similarity=0.394  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++.+++|.|+++++|.++++.+...|++|+.+.+++++.+.+ +.+.  .+. +  .+..+.+...++.+...  .+++|
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--~~~-v--~~~~~~~~~~~~~~~~~--~~~vd  236 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELG--ADA-F--VDFKKSDDVEAVKELTG--GGGAH  236 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcC--CcE-E--EcCCCccHHHHHHHHhc--CCCCC
Confidence            578999999999999999999999999999999998766544 4443  111 1  22233322222222111  13699


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++++.+
T Consensus       237 ~vl~~~~  243 (341)
T cd08297         237 AVVVTAV  243 (341)
T ss_pred             EEEEcCC
Confidence            9998664

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.17  E-value=0.13  Score=44.91  Aligned_cols=31  Identities=26%  Similarity=0.424  Sum_probs=25.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023553           20 VALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~   51 (280)
                      +|+|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            3678886 89999999999999975 7777755

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.16  E-value=0.059  Score=43.30  Aligned_cols=42  Identities=17%  Similarity=0.298  Sum_probs=33.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   62 (280)
                      +|.|.|+ |.+|+.+|..|+..|+.|.+.+++++.++...+.+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i   42 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRI   42 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHH
Confidence            4678888 99999999999999999999999988776654443

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.14  E-value=0.1  Score=46.69  Aligned_cols=80  Identities=18%  Similarity=0.189  Sum_probs=52.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH-HHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE-EDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   93 (280)
                      .+|.+++|.|+ +++|...++.....|+ +|+++++++++.+.+ +.+..  . .++  |..+. ++..+.+.++..  +
T Consensus       186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga--~-~~i--~~~~~~~~~~~~v~~~~~--~  256 (369)
T cd08301         186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGV--T-EFV--NPKDHDKPVQEVIAEMTG--G  256 (369)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCC--c-eEE--cccccchhHHHHHHHHhC--C
Confidence            36899999985 8999999998888899 799999988876654 33431  1 122  22221 233333333322  3


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|+++.+.|.
T Consensus       257 ~~d~vid~~G~  267 (369)
T cd08301         257 GVDYSFECTGN  267 (369)
T ss_pred             CCCEEEECCCC
Confidence            69999998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.14  E-value=0.12  Score=47.64  Aligned_cols=41  Identities=24%  Similarity=0.473  Sum_probs=35.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   60 (280)
                      ++.|.||.|.+|.++++.|.+.|+.|++.+|+++...+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence            68999999999999999999999999999998776544333

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.14  E-value=0.17  Score=41.32  Aligned_cols=37  Identities=24%  Similarity=0.352  Sum_probs=30.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~   51 (280)
                      ..+++++|+|.|+ +|+|.++++.|+..|.. +.+++.+
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            4578999999975 55999999999999985 7777655

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.14  E-value=0.06  Score=44.66  Aligned_cols=42  Identities=17%  Similarity=0.238  Sum_probs=36.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS   61 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~   61 (280)
                      ++.|.||+|.+|.++++.|++.|++|++.+|+++..+...+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            588999999999999999999999999999998877665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.12  E-value=0.13  Score=44.83  Aligned_cols=78  Identities=21%  Similarity=0.316  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      .|.+++|.|+++++|.++++.+...|+.++++.++++..+.+ ..+..  + .++  +..+.+..   .+.+.+..  .+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~--~-~~~--~~~~~~~~---~~~~~~~~~~~~  210 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAA--I-ILI--RYPDEEGF---APKVKKLTGEKG  210 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCC--c-EEE--ecCChhHH---HHHHHHHhCCCC
Confidence            578999999999999999999999999988888887766655 33321  1 122  22222211   22222222  36


Q ss_pred             ccEEEECCC
Q 023553           95 LDIMVNNAG  103 (280)
Q Consensus        95 id~li~~ag  103 (280)
                      +|+++++.|
T Consensus       211 ~d~~i~~~~  219 (334)
T PTZ00354        211 VNLVLDCVG  219 (334)
T ss_pred             ceEEEECCc
Confidence            999998875

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.12  E-value=0.32  Score=44.14  Aligned_cols=117  Identities=17%  Similarity=0.177  Sum_probs=63.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ..|++++|. |.++||..+++.+...|++++++ ++++++++.+ +.+..  . .   .+.....+..+.+.++.. -..
T Consensus       184 ~~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a-~~~Ga--~-~---v~~~~~~~~~~~v~~~~~-~~g  254 (393)
T TIGR02819       184 GPGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA-RSFGC--E-T---VDLSKDATLPEQIEQILG-EPE  254 (393)
T ss_pred             CCCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH-HHcCC--e-E---EecCCcccHHHHHHHHcC-CCC
Confidence            468899994 56899999999888899986554 5555554443 33432  2 1   222222222222222211 126


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV  156 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~  156 (280)
                      +|++|.+.|....  ....+...           ..+-..++..+..+  +.+|++++++..
T Consensus       255 ~Dvvid~~G~~~~--~~~~~~~~-----------~~~~~~~~~~~~~~--~~~G~i~~~G~~  301 (393)
T TIGR02819       255 VDCAVDCVGFEAR--GHGHDGKK-----------EAPATVLNSLMEVT--RVGGAIGIPGLY  301 (393)
T ss_pred             CcEEEECCCCccc--cccccccc-----------cchHHHHHHHHHHh--hCCCEEEEeeec
Confidence            9999999996421  00000100           02222344455554  446999998764

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK14967 putative methyltransferase; Provisional

Probab=95.11  E-value=0.53  Score=39.05  Aligned_cols=75  Identities=20%  Similarity=0.155  Sum_probs=48.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++.++|-.|+++|.   ++..+++.++ +|++++.++..++...+.... ..++.++..|+.+.      +.     .++
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~~-----~~~  101 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------VE-----FRP  101 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------cc-----CCC
Confidence            46789999987755   3444555566 899999998776654443322 12456666665431      11     148


Q ss_pred             ccEEEECCCCC
Q 023553           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 id~li~~ag~~  105 (280)
                      .|.+|.|....
T Consensus       102 fD~Vi~npPy~  112 (223)
T PRK14967        102 FDVVVSNPPYV  112 (223)
T ss_pred             eeEEEECCCCC
Confidence            99999998654

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.09  E-value=0.19  Score=40.04  Aligned_cols=32  Identities=22%  Similarity=0.389  Sum_probs=27.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc
Q 023553           20 VALITGGATGIGESTVRLFHKHGAK-VCIADVQD   52 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   52 (280)
                      +|+|.|+ ||+|..++..|+..|.. +.+++.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3677775 89999999999999985 99988875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.07  E-value=0.19  Score=44.30  Aligned_cols=75  Identities=28%  Similarity=0.460  Sum_probs=49.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|.+++|+|+++++|.++++.....|++|+.+.++ +.. +..+.+..  + ..  .|..+.+...++    .. .+.+|
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~-~~~~~~g~--~-~~--~~~~~~~~~~~l----~~-~~~vd  229 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAI-PLVKSLGA--D-DV--IDYNNEDFEEEL----TE-RGKFD  229 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chH-HHHHHhCC--c-eE--EECCChhHHHHH----Hh-cCCCC
Confidence            48999999999999999999998999998887765 322 23333331  1 11  233333322222    22 25799


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++++.|
T Consensus       230 ~vi~~~g  236 (350)
T cd08248         230 VILDTVG  236 (350)
T ss_pred             EEEECCC
Confidence            9999876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.06  E-value=0.59  Score=40.93  Aligned_cols=110  Identities=14%  Similarity=0.173  Sum_probs=64.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHH-HHHHhCCC---CCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQ-VCQSLGGE---PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~-~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++.|.|+ |.+|..++..|+..|  ..|++++++.+..+. ..+..+..   .......   .+.++           +.
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~~-----------l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYAD-----------CK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHHH-----------hC
Confidence            5788898 899999999999999  579999999876653 22222211   1111111   12221           24


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                      .-|++|..+|....+     ..+   ..+.+..|+.-.-.+.+.+..+   ..+|.++.++.
T Consensus        67 ~aDiViita~~~~~~-----~~~---r~dl~~~n~~i~~~~~~~l~~~---~~~giiiv~tN  117 (308)
T cd05292          67 GADVVVITAGANQKP-----GET---RLDLLKRNVAIFKEIIPQILKY---APDAILLVVTN  117 (308)
T ss_pred             CCCEEEEccCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecC
Confidence            899999999975331     122   2344455544444444444432   23577777653

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.04  E-value=0.52  Score=43.92  Aligned_cols=76  Identities=13%  Similarity=0.240  Sum_probs=50.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ..+.+|+++|.| .|+.|+++++.|.+.|+.|.+.+++.....+..+..    .+.+...+ .+.+.+           .
T Consensus        11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~----gi~~~~~~-~~~~~~-----------~   73 (473)
T PRK00141         11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVT----GVADISTA-EASDQL-----------D   73 (473)
T ss_pred             ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhc----CcEEEeCC-CchhHh-----------c
Confidence            346789999999 778999999999999999999998655433222221    22232211 111111           3


Q ss_pred             CccEEEECCCCCC
Q 023553           94 TLDIMVNNAGISG  106 (280)
Q Consensus        94 ~id~li~~ag~~~  106 (280)
                      ..|.+|...|+..
T Consensus        74 ~~d~vV~Spgi~~   86 (473)
T PRK00141         74 SFSLVVTSPGWRP   86 (473)
T ss_pred             CCCEEEeCCCCCC
Confidence            6899999999863

>PLN03139 formate dehydrogenase; Provisional

Probab=95.04  E-value=0.31  Score=44.03  Aligned_cols=39  Identities=18%  Similarity=0.209  Sum_probs=34.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      ..++.||++.|.| .|.||+.+++.|...|++|+..+++.
T Consensus       194 ~~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        194 AYDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             CcCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCC
Confidence            3579999999999 57799999999999999999988864

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=94.98  E-value=0.67  Score=40.87  Aligned_cols=109  Identities=15%  Similarity=0.130  Sum_probs=63.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCc--chHHHHHHHhC-CC----CCeEEEecCCCCHHHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGA-------KVCIADVQD--NLGQQVCQSLG-GE----PDTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~~   85 (280)
                      ++.|+|++|.+|..++..|+..+.       .+++++.++  +.++.....+. ..    ..+. +..  .+.+      
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~~--~~~~------   75 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-ATT--DPEE------   75 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Eec--ChHH------
Confidence            689999999999999999998874       689999865  32333322222 11    1111 111  1122      


Q ss_pred             HHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-C-CceEEEEc
Q 023553           86 DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-T-KGTIISIC  154 (280)
Q Consensus        86 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~-~g~iv~is  154 (280)
                           .+..-|++|..||....   +  ..+.   .+.++.|+.-.    +.+.+.+.+. . ++.++.+|
T Consensus        76 -----~~~daDvVVitAG~~~k---~--g~tR---~dll~~Na~i~----~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        76 -----AFKDVDAALLVGAFPRK---P--GMER---ADLLSKNGKIF----KEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             -----HhCCCCEEEEeCCCCCC---C--CCcH---HHHHHHHHHHH----HHHHHHHHhhCCCCeEEEEeC
Confidence                 22488999999997532   1  2343   33555555444    4444444443 2 56777665

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.94  E-value=0.26  Score=41.52  Aligned_cols=38  Identities=21%  Similarity=0.355  Sum_probs=31.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   52 (280)
                      ..+++++|+|.|+ ||+|..++..|+..|.. +++++.+.
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            4588899999976 59999999999999974 77777653

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.94  E-value=0.14  Score=46.38  Aligned_cols=42  Identities=21%  Similarity=0.260  Sum_probs=36.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   58 (280)
                      ++.+++|.|+++++|.++++.+...|++++++.++.++.+.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            578999999999999999999889999988888777655444

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=94.94  E-value=0.27  Score=40.14  Aligned_cols=38  Identities=21%  Similarity=0.359  Sum_probs=31.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~   51 (280)
                      ...+++.+|+|.|+++ +|.++++.|+..|.. +.+++.+
T Consensus        14 q~~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          14 QNKLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHHHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence            3457889999998776 999999999999986 7777765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.93  E-value=0.064  Score=46.06  Aligned_cols=44  Identities=14%  Similarity=0.277  Sum_probs=38.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHh
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~   62 (280)
                      +|+++|.|+ ||-+++++..|++.|+. |.++.|+.++.+++++.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            578999986 99999999999999985 999999998887776654

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=94.92  E-value=0.12  Score=45.25  Aligned_cols=77  Identities=19%  Similarity=0.276  Sum_probs=48.6

Q ss_pred             CCcEEEE-EcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--C
Q 023553           17 VGRVALI-TGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlI-tGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   93 (280)
                      .+..++| +||++++|...++.....|++|+.+.+++++.+.+.+ +.  .+ .++  |..+.+..    +.+.+..  .
T Consensus       142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~g--~~-~~i--~~~~~~~~----~~v~~~~~~~  211 (324)
T cd08291         142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-IG--AE-YVL--NSSDPDFL----EDLKELIAKL  211 (324)
T ss_pred             CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC--Cc-EEE--ECCCccHH----HHHHHHhCCC
Confidence            4444555 5999999999998877889999999988876655533 32  12 222  22222222    2222222  2


Q ss_pred             CccEEEECCC
Q 023553           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~id~li~~ag  103 (280)
                      ++|++|.+.|
T Consensus       212 ~~d~vid~~g  221 (324)
T cd08291         212 NATIFFDAVG  221 (324)
T ss_pred             CCcEEEECCC
Confidence            6999999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=94.92  E-value=0.83  Score=40.10  Aligned_cols=112  Identities=10%  Similarity=0.089  Sum_probs=67.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++.|+|+ |.+|..++..|+..|.  .+++++.+.+.++.....+...    ....+...  .+.++           
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-----------   68 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-----------   68 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------
Confidence            457899996 9999999999998864  5899999877655444443221    11122211  22222           


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEcc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICS  155 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS  155 (280)
                      +..-|++|..||....     ...+..   +.+..|..-    ++.+.+.+.+. .++.+++++-
T Consensus        69 ~~~adivvitaG~~~k-----~g~~R~---dll~~N~~i----~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          69 TANSKVVIVTAGARQN-----EGESRL---DLVQRNVDI----FKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             hCCCCEEEECCCCCCC-----CCCCHH---HHHHHHHHH----HHHHHHHHHHhCCCcEEEEccC
Confidence            2388999999997542     123443   334444443    44444444333 3577777764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=94.91  E-value=0.38  Score=44.15  Aligned_cols=112  Identities=11%  Similarity=0.033  Sum_probs=71.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc-------CC--eEEEEecCcchHHHHHHHhCCCC-----CeEEEecCCCCHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKH-------GA--KVCIADVQDNLGQQVCQSLGGEP-----DTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~-------g~--~Vi~~~r~~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~   83 (280)
                      --+|.|+|++|.+|.+++..|+..       +.  .+++++++.+.++....++....     ++. +..  .+.++   
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~ye~---  173 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DPYEV---  173 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CCHHH---
Confidence            348999999999999999999987       54  68999999888776655554321     111 111  13222   


Q ss_pred             HHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhccc--CCCceEEEEcc
Q 023553           84 AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP--QTKGTIISICS  155 (280)
Q Consensus        84 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~g~iv~isS  155 (280)
                              +..-|++|..||....   +  ..+.   .+.++.|..    +++.+.+.+.+  ..++.||.++-
T Consensus       174 --------~kdaDiVVitAG~prk---p--G~tR---~dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        174 --------FQDAEWALLIGAKPRG---P--GMER---ADLLDINGQ----IFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             --------hCcCCEEEECCCCCCC---C--CCCH---HHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCC
Confidence                    2489999999997532   1  2333   334444443    45555555554  34677777663

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=94.85  E-value=0.18  Score=46.05  Aligned_cols=62  Identities=24%  Similarity=0.274  Sum_probs=44.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-------HHHHHHhCCCCCeEEEecCCCC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-------QQVCQSLGGEPDTFFCHCDVTK   77 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~-------~~~~~~~~~~~~~~~~~~D~~~   77 (280)
                      .+|.||++.|.|- |.||+.+|+.+...|++|+..++.....       ..+ +++-...++..+.+-+++
T Consensus       147 ~~L~gktvGIiG~-G~IG~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l-~ell~~sDiVslh~Plt~  215 (409)
T PRK11790        147 FEVRGKTLGIVGY-GHIGTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSL-EELLAQSDVVSLHVPETP  215 (409)
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCcccccCCceecCCH-HHHHhhCCEEEEcCCCCh
Confidence            4699999999997 8999999999999999999998753211       011 222223567777776664

>PRK07877 hypothetical protein; Provisional

Probab=94.84  E-value=0.18  Score=49.17  Aligned_cols=81  Identities=20%  Similarity=0.227  Sum_probs=54.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCc------------------chHH---HHHHHhCCCCCeE
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQD------------------NLGQ---QVCQSLGGEPDTF   69 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~------------------~~~~---~~~~~~~~~~~~~   69 (280)
                      ...|++++|+|.|+ | +|..++..|+..|-  ++++++.+.                  .|.+   +.+..+.+..++.
T Consensus       102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~  179 (722)
T PRK07877        102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE  179 (722)
T ss_pred             HHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence            34589999999999 4 99999999999994  688877552                  1222   2233344455667


Q ss_pred             EEecCCCCHHHHHHHHHHHHHHhCCccEEEECCC
Q 023553           70 FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG  103 (280)
Q Consensus        70 ~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag  103 (280)
                      .+...++ ++.+.++++       +.|++|.+.-
T Consensus       180 ~~~~~i~-~~n~~~~l~-------~~DlVvD~~D  205 (722)
T PRK07877        180 VFTDGLT-EDNVDAFLD-------GLDVVVEECD  205 (722)
T ss_pred             EEeccCC-HHHHHHHhc-------CCCEEEECCC
Confidence            7776666 445544443       5677776653

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.82  E-value=0.33  Score=42.74  Aligned_cols=66  Identities=29%  Similarity=0.312  Sum_probs=47.4

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH-HH-------HHHhCCCCCeEEEecCCCCH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-QV-------CQSLGGEPDTFFCHCDVTKE   78 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~-~~-------~~~~~~~~~~~~~~~D~~~~   78 (280)
                      ...++.||++.|.| .|.||+++|+.+...|++|+..+|++.... +.       .+++-...++..+.|-++.+
T Consensus       140 ~~~~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~  213 (324)
T COG1052         140 LGFDLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPE  213 (324)
T ss_pred             cccCCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChH
Confidence            34579999999998 578999999999999999999998864111 10       11222235677777777654

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.80  E-value=0.096  Score=37.04  Aligned_cols=38  Identities=21%  Similarity=0.353  Sum_probs=33.5

Q ss_pred             CCChHHHHHHHHHHHcC---CeEEEE-ecCcchHHHHHHHhC
Q 023553           26 GATGIGESTVRLFHKHG---AKVCIA-DVQDNLGQQVCQSLG   63 (280)
Q Consensus        26 as~giG~~ia~~l~~~g---~~Vi~~-~r~~~~~~~~~~~~~   63 (280)
                      |+|.+|.++++.|.+.|   .+|.++ .|++++.+++.++..
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            88999999999999999   889865 999999888877654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.78  E-value=0.3  Score=43.89  Aligned_cols=37  Identities=22%  Similarity=0.437  Sum_probs=31.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~   51 (280)
                      ..+++++|+|.|+ ||+|..++..|+..|. ++.+++.+
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4478899999987 5999999999999997 68888766

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	280
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		2e-57
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		4e-37
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-35
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		5e-35
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		4e-32
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		5e-31
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		4e-30
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		1e-29
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		1e-29
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		2e-29
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		3e-29
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		3e-29
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-29
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		6e-29
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		3e-28
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		4e-28
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-28
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		5e-28
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		5e-28
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-27
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		5e-27
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-26
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		1e-26
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		2e-26
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-26
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		3e-26
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		3e-26
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		4e-26
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		4e-26
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		4e-26
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		7e-26
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-26
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-25
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-25
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-25
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-25
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-25
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-25
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		3e-25
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		3e-25
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		4e-25
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		4e-25
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		9e-25
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		1e-24
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		1e-24
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		1e-24
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		1e-24
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-24
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-24
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-24
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		2e-24
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-24
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		4e-24
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		6e-24
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		7e-24
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		8e-24
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		1e-23
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-23
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		2e-23
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-23
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		2e-23
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		3e-23
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		4e-23
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		4e-23
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		4e-23
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		5e-23
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-23
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		7e-23
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		7e-23
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		9e-23
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		1e-22
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		2e-22
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-22
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		2e-22
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		3e-22
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		3e-22
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		3e-22
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		3e-22
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-22
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		4e-22
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		6e-22
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		6e-22
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		6e-22
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		1e-21
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		3e-21
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-21
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		4e-21
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		4e-21
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		5e-21
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		6e-21
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		7e-21
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		8e-21
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-20
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		2e-20
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		2e-20
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		2e-20
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-20
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		2e-20
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-20
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		3e-20
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-20
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		6e-20
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		9e-20
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-19
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		1e-19
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-19
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-19
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-19
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		3e-19
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-19
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		4e-19
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		4e-19
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		5e-19
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		5e-19
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		7e-19
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		1e-18
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		1e-18
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		1e-18
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		1e-18
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		2e-18
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		2e-18
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		2e-18
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		2e-18
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		3e-18
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		4e-18
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		4e-18
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-18
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		4e-18
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		4e-18
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		4e-18
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		5e-18
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		5e-18
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		6e-18
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		7e-18
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		9e-18
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		9e-18
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-17
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		3e-17
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-17
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		3e-17
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		3e-17
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		4e-17
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-17
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		5e-17
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		5e-17
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		5e-17
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		7e-17
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		7e-17
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		7e-17
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		7e-17
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		8e-17
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		1e-16
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		1e-16
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-16
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		1e-16
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		1e-16
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-16
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		3e-16
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		3e-16
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		3e-16
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		3e-16
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		4e-16
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		1e-15
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		1e-15
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		1e-15
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		1e-15
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		2e-15
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		2e-15
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		2e-15
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-15
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		2e-15
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		3e-15
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		3e-15
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		3e-15
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		4e-15
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		6e-15
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		7e-15
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		1e-14
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		1e-14
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		1e-14
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		1e-14
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-14
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		3e-14
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		3e-14
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		4e-14
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		5e-14
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-14
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		8e-14
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		8e-14
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-13
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		1e-13
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-13
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		2e-13
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		2e-13
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		2e-13
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-13
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		2e-13
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		2e-13
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		3e-13
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		3e-13
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		3e-13
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		4e-13
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		4e-13
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		5e-13
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		5e-13
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		6e-13
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		6e-13
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		6e-13
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		7e-13
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		1e-12
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		1e-12
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		1e-12
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-12
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		1e-12
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		1e-12
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		1e-12
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-12
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		2e-12
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		3e-12
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		3e-12
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		3e-12
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		3e-12
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		7e-12
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		7e-12
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		1e-11
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		1e-11
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		1e-11
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		2e-11
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		2e-11
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		3e-10
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		8e-10
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		1e-09
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		1e-09
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		2e-09
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		2e-09
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		4e-09
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		6e-09
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		6e-09
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		5e-08
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		6e-08
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		6e-08
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		1e-07
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		2e-07
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		2e-07
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		2e-07
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		3e-07
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		5e-07
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		6e-07
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		7e-07
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		9e-07
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		1e-06
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		2e-06
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		3e-06
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		3e-06
2ptg_A	319	Crystal Structure Of Eimeria Tenella Enoyl Reductas		9e-06
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		2e-05
1dfg_A	261	X-Ray Structure Of Escherichia Coli Enoyl Reductase		3e-05
1qsg_A	265	Crystal Structure Of Enoyl Reductase Inhibition By		3e-05
1c14_A	262	Crystal Structure Of E Coli Enoyl Reductase-nad+-tr		3e-05
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		3e-05
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		4e-05
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		5e-05
3pje_A	270	Structure Of Enr G93s Mutant-Nad+-Triclosan Complex		6e-05
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		6e-05
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		9e-05
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		9e-05
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		1e-04
2o2s_A	315	The Structure Of T. Gondii Enoyl Acyl Carrier Prote		1e-04
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		1e-04
3pjd_A	270	Structure Of Enr G93a Mutant-Nad+-Triclosan Complex		1e-04
1cwu_A	296	Brassica Napus Enoyl Acp Reductase A138g Mutant Com		2e-04
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		2e-04
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		2e-04
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		2e-04
1d7o_A	297	Crystal Structure Of Brassica Napus Enoyl Acyl Carr		2e-04
1eno_A	312	Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLE		2e-04
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		3e-04
2o50_A	315	The Crystal Structure Of Toxoplasma Gondii Enoyl Ac		3e-04
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		3e-04
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		3e-04
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		3e-04
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		3e-04
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		3e-04
3pjf_A	270	Structure Of Enr G93v Mutant-Nad+-Triclosan Complex		3e-04
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		3e-04
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		3e-04
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		4e-04
3k2e_A	296	Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) R		5e-04
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		5e-04
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		5e-04
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		5e-04
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		6e-04
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		6e-04
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		6e-04
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		6e-04
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		7e-04
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		7e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  219 bits (557), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/275 (48%), Positives = 178/275 (64%), Gaps = 11/275 (4%)
Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M ++++ DSS    RL  +VA+ITGGA GIGE+T +LF ++GAKV IAD+ D+ GQ+VC 
Sbjct: 1   MGSTSTPDSS--TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN 58
Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           ++G      F HCDVTK+EDV + VD T+ K G LDIM  N G+       I EA   +F
Sbjct: 59  NIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDF 118
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-PHAYTGSKHAVLGLN 179
           ++V DINV G F   KHAAR+MIP  KG+I+   S++    G G  H YT +KHAVLGL 
Sbjct: 119 KRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLT 178
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHL-PEEERTEDAMVGFRNFVARNANMQGTEL 238
            ++  ELG+YGIRVNCVSPY VA+ L       +  R E+          + AN++GT L
Sbjct: 179 TSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEE-------LAHQAANLKGTLL 231
Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
            A DVA+AV +LA DE++Y+SG NL++DGG+T  N
Sbjct: 232 RAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTN 266

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  151 bits (381), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VAL++GGA G+G S VR     GAKV   D+ D  G+ +   L       + H D
Sbjct: 4   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL--ADAARYVHLD 61
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT+     +AVD  V  FG L ++VNNAGI       I +  L+E++++ D+N+ GVF G
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN--IGTIEDYALTEWQRILDVNLTGVFLG 119
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           ++   + M    +G+II+I S+ G  G +  H YT +K AV GL K+ A ELG  GIRVN
Sbjct: 120 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            + P  V T +    +PE+         F+  + R A          +V+N V++LASDE
Sbjct: 180 SIHPGLVKTPMT-DWVPEDI--------FQTALGRAAE-------PVEVSNLVVYLASDE 223
Query: 255 ARYISGTNLMVDGG 268
           + Y +G   +VDGG
Sbjct: 224 SSYSTGAEFVVDGG 237

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 135/254 (53%), Gaps = 20/254 (7%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VAL++GGA G G S VR     GAKV   D+ D  G+     L       + H D
Sbjct: 4   RLTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAEL--ADAARYVHLD 61
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT+     +AVD  V  FG L ++VNNAGI       I +  L+E++++ D+N+ GVF G
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN--IGTIEDYALTEWQRILDVNLTGVFLG 119
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           ++   +      +G+II+I S+ G  G +  H YT +K AV GL K+ A ELG  GIRVN
Sbjct: 120 IRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            + P  V T       P  +   + +  F+  + R A          +V+N V++LASDE
Sbjct: 180 SIHPGLVKT-------PXTDWVPEDI--FQTALGRAAE-------PVEVSNLVVYLASDE 223
Query: 255 ARYISGTNLMVDGG 268
           + Y +G   +VDGG
Sbjct: 224 SSYSTGAEFVVDGG 237

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score =  144 bits (364), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 140/266 (52%), Gaps = 9/266 (3%)
Query: 7   TDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGE 65
           T +S    R   RV LITGG +G+G +T       GAK+ + DV  + L       L   
Sbjct: 2   TATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA 61
Query: 66  PDT--FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV 123
           PD        DV+ E  V + V  T E+FG +D   NNAGI G   P       +EF+KV
Sbjct: 62  PDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNP-TESFTAAEFDKV 120
Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNV 182
             IN++GVF G++   +IM  Q  G +++  SV G I G+G  + Y  +KH V+GL +N 
Sbjct: 121 VSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG-IRGIGNQSGYAAAKHGVVGLTRNS 179
Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
           A E G+YGIR+N ++P A+ T +    + + +  E+       F+  N + +  E  A +
Sbjct: 180 AVEYGRYGIRINAIAPGAIWTPMVENSMKQLD-PENPRKAAEEFIQVNPSKRYGE--APE 236
Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           +A  V FL SD+A Y++ T + +DGG
Sbjct: 237 IAAVVAFLLSDDASYVNATVVPIDGG 262

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  134 bits (338), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 132/258 (51%), Gaps = 9/258 (3%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCH 72
           Q L  +V ++TG  +GIG +  + F  + + V   ++ ++   Q+ Q L G   +     
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV+K++DV   V  T E +  +D++ NNAGI     P + E     +E+V  +N+   F
Sbjct: 63  ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTP-VAEVSDELWERVLAVNLYSAF 121
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +  +    IM+ Q KG I++  S+AG  GG     YT +KH ++GL +++AA  G  GIR
Sbjct: 122 YSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIR 181
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
              V P  V T + L      E     +    +  +R A  +       D+AN ++FLAS
Sbjct: 182 AVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPE-------DIANVIVFLAS 234
Query: 253 DEARYISGTNLMVDGGFT 270
           DEA +++G  ++VDGG T
Sbjct: 235 DEASFVNGDAVVVDGGLT 252

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score =  131 bits (329), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 137/258 (53%), Gaps = 14/258 (5%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGEPDTFF-CHCDVT 76
           RVA++TG ++G G +    F   G +V   D+  + L +          D       DV 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGM 135
            E DV +A+  T+E+FG +D++VNNAGI+G +    +    + +F+KV  +NV+G+F G 
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M+ Q  G I++I SVA  +   G  AYT SK AVL L K+VA +    GIR N 
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNA 182
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V P  + T +    L + E  +  +          A +   E+ TA  VA+AV+FLA ++
Sbjct: 183 VCPGMIETPMTQWRLDQPELRDQVL----------ARIPQKEIGTAAQVADAVMFLAGED 232
Query: 255 ARYISGTNLMVDGGFTSV 272
           A Y++G  L++DG +T++
Sbjct: 233 ATYVNGAALVMDGAYTAI 250

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 127/256 (49%), Gaps = 15/256 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+VAL+TG + GIG +      K GA V +  A  +    + V +      D      
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV   EDV + V  TV+ FG +DI+VNNAG++      +      E++ V + N+KGVF 
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNL--LMRMKEEEWDTVINTNLKGVFL 119
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             K  +R M+ Q  G I++I SV G  G  G   Y  +K  V+GL K  A EL    I V
Sbjct: 120 CTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITV 179
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N ++P  +AT +    L E  + E         +      Q  E  A D+ANAV F ASD
Sbjct: 180 NAIAPGFIATDMTDV-LDENIKAE--------MLKLIPAAQFGE--AQDIANAVTFFASD 228
Query: 254 EARYISGTNLMVDGGF 269
           +++YI+G  L VDGG 
Sbjct: 229 QSKYITGQTLNVDGGM 244

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 128/255 (50%), Gaps = 15/255 (5%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VAL+TGGA+G+G   V+L    GAKV  +D+ +  GQQ+   LG    + F   D
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG--ERSMFVRHD 60
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP-DIREADLSEFEKVFDINVKGVFH 133
           V+ E D    +     + GTL+++VNNAGI     P D+    L +F ++  IN + VF 
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGI---LLPGDMETGRLEDFSRLLKINTESVFI 117
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK--YGI 191
           G +     M  +T G+II++ SV+  +       Y+ SK AV  L +  A    K  Y I
Sbjct: 118 GCQQGIAAM-KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAI 176
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN + P  + T +  A LP+    E  +   +       N  G       +A  VLFLA
Sbjct: 177 RVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPK------LNRAGRAYMPERIAQLVLFLA 230
Query: 252 SDEARYISGTNLMVD 266
           SDE+  +SG+ L  D
Sbjct: 231 SDESSVMSGSELHAD 245

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 128/257 (49%), Gaps = 16/257 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+  +ITGGA G+G    R     GA+V +ADV D  G    + LG      + H DV
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG--DAARYQHLDV 60
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T EED    V    E+FG++D +VNNAGIS      +    +  F KV +IN+ GVF GM
Sbjct: 61  TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMF--LETESVERFRKVVEINLTGVFIGM 118
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K     M     G+I++I S AG +G     +Y  SK  V GL+K  A ELG   IRVN 
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNF-VARNANMQGTELTANDVANAVLFLASDE 254
           V P     G+    +  E         + N  + R  N  G      ++A AV+ L SD 
Sbjct: 179 VHP-----GMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPG------EIAGAVVKLLSDT 227
Query: 255 ARYISGTNLMVDGGFTS 271
           + Y++G  L VDGG+T+
Sbjct: 228 SSYVTGAELAVDGGWTT 244

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 127/262 (48%), Gaps = 21/262 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L GR A++TGG+ GIG +  R   K GA V IAD+     Q V   L  E   F    DV
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL--ENGGFAVEVDV 67
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHG 134
           TK   V +A+   ++  G  D++  NAG+S   P  DI +    E++  FD+N +GVF  
Sbjct: 68  TKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITD---EEWDFNFDVNARGVFLA 124
Query: 135 MKHAAR-IMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            + A R  +   TKG I++  S+A  +G      Y+ SK AV G  + +A E+    IRV
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRV 184
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT-------ANDVANA 246
           NCV P  V T +       +ER        R         +   LT         DVA+ 
Sbjct: 185 NCVCPGFVKTAM-------QEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADV 237
Query: 247 VLFLASDEARYISGTNLMVDGG 268
           V+FLASD AR+++G  + V GG
Sbjct: 238 VVFLASDAARFMTGQGINVTGG 259

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 126/257 (49%), Gaps = 17/257 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+  +ITGGA G+G    R     GA+V +ADV D  G    + LG      + H DV
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG--DAARYQHLDV 60
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T EED    V    E+FG++D +VNNAGIS      +    +  F KV +IN+ GVF GM
Sbjct: 61  TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMF--LETESVERFRKVVEINLTGVFIGM 118
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K     M     G+I++I S AG +G     +Y  SK  V GL+K  A ELG   IRVN 
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-QGTELTANDVANAVLFLASDE 254
           V P        + + P    T     G R       N   G      ++A AV+ L SD 
Sbjct: 179 VHP-------GMTYTPMTAET-----GIRQGEGNYPNTPMGRVGEPGEIAGAVVKLLSDT 226
Query: 255 ARYISGTNLMVDGGFTS 271
           + Y++G  L VDGG+T+
Sbjct: 227 SSYVTGAELAVDGGWTT 243

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 141/262 (53%), Gaps = 19/262 (7%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD--TFFCH 72
           RL G+VA+ITGG  GIG +    F + GAKV I D   ++G++  +S+ G PD   FF H
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSV-GTPDQIQFFQH 61
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D + E+      D T + FG +  +VNNAGI  A    + E   +E+ K+  +N+ GVF
Sbjct: 62  -DSSDEDGWTKLFDATEKAFGPVSTLVNNAGI--AVNKSVEETTTAEWRKLLAVNLDGVF 118
Query: 133 HGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE--LGKY 189
            G +   + M  +  G +II++ S+ G +G     AY  SK AV  ++K+ A +  L  Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            +RVN V P  + T L +  LP     E+AM        R     G     ND+A   ++
Sbjct: 179 DVRVNTVHPGYIKTPL-VDDLP---GAEEAM------SQRTKTPMGHIGEPNDIAYICVY 228
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           LAS+E+++ +G+  +VDGG+T+
Sbjct: 229 LASNESKFATGSEFVVDGGYTA 250

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  124 bits (312), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 135/264 (51%), Gaps = 19/264 (7%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           RV ++TGG +GIG +T  LF K+GA V +ADV ++   +V   +G +   F    DV+  
Sbjct: 28  RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKA--FGVRVDVSSA 85
Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           +D  S V+ T  K+G +D++VNNAG       ++       ++++  +NVKG+F   K+ 
Sbjct: 86  KDAESXVEKTTAKWGRVDVLVNNAGF--GTTGNVVTIPEETWDRIXSVNVKGIFLCSKYV 143
Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSP 198
             +      G+II+  S           AY  SK A+  L +  A +  K GIRVN V+P
Sbjct: 144 IPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAP 203
Query: 199 YAVATG-----LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
             + +       A A  P + R++        F AR    +    TA ++A A LFLASD
Sbjct: 204 GTIDSPYFTKIFAEAKDPAKLRSD--------FNARAVXDRXG--TAEEIAEAXLFLASD 253
Query: 254 EARYISGTNLMVDGGFTSVNHSLR 277
            +R+ +G+ L VDGG +  NH ++
Sbjct: 254 RSRFATGSILTVDGGSSIGNHLVK 277

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  124 bits (311), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 131/256 (51%), Gaps = 21/256 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           + AL+TG + GIG S      + G  V +  A  ++     V +      D+F    +V 
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 70
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++
Sbjct: 71  DADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQ 128
Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
            A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V
Sbjct: 129 KATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAV 188
Query: 197 SPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           +P  + + +  A    L E+  T+  +  F           G +    D+AN V FLASD
Sbjct: 189 APGFIVSDMTDALSDELKEQMLTQIPLARF-----------GQD---TDIANTVAFLASD 234
Query: 254 EARYISGTNLMVDGGF 269
           +A+YI+G  + V+GG 
Sbjct: 235 KAKYITGQTIHVNGGM 250

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score =  122 bits (305), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 140/262 (53%), Gaps = 19/262 (7%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD--TFFCH 72
           RL G+VA+ITGG  GIG +    F + GAKV I     ++G++  +S+ G PD   FF H
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV-GTPDQIQFFQH 61
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D + E+      D T + FG +  +VNNAGI  A    + E   +E+ K+  +N+ GVF
Sbjct: 62  -DSSDEDGWTKLFDATEKAFGPVSTLVNNAGI--AVNKSVEETTTAEWRKLLAVNLDGVF 118
Query: 133 HGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE--LGKY 189
            G +   + M  +  G +II++ S+ G +G     AY  SK AV  ++K+ A +  L  Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            +RVN V P  + T L +  LP     E+AM        R     G     ND+A   ++
Sbjct: 179 DVRVNTVHPGYIKTPL-VDDLP---GAEEAM------SQRTKTPMGHIGEPNDIAYICVY 228
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           LAS+E+++ +G+  +VDGG+T+
Sbjct: 229 LASNESKFATGSEFVVDGGYTA 250

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score =  121 bits (304), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 137/257 (53%), Gaps = 18/257 (7%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+  L+TGGA GIG +  + F + GA V + D++   G++V +++GG     F   D+  
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGGA----FFQVDLED 60
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E +    V+      G +D++VNNA I+ AP   +    L E+ +V ++N+    H    
Sbjct: 61  ERERVRFVEEAAYALGRVDVLVNNAAIA-APGSAL-TVRLPEWRRVLEVNLTAPMHLSAL 118
Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
           AAR M     G I+++ SV G        AY  SK  ++ L +++A +L    IRVN V+
Sbjct: 119 AAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVA 178
Query: 198 PYAVATGL---ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           P A+AT     A+A  P+ ERT       R++   +A  +  +    +VA AVLFLAS++
Sbjct: 179 PGAIATEAVLEAIALSPDPERTR------RDWEDLHALRRLGK--PEEVAEAVLFLASEK 230
Query: 255 ARYISGTNLMVDGGFTS 271
           A +I+G  L VDGG T+
Sbjct: 231 ASFITGAILPVDGGMTA 247

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score =  121 bits (303), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 138/259 (53%), Gaps = 23/259 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCH-C 73
           L G+ +LITG ++GIG +  RL HK G+KV I+       ++  +SLG    D +    C
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN----EEKLKSLGNALKDNYTIEVC 67
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           ++  +E+ CS +   + K   LDI+V NAGI+      IR  D  +F+KV DIN+K  F 
Sbjct: 68  NLANKEE-CSNL---ISKTSNLDILVCNAGITSDTLA-IRMKD-QDFDKVIDINLKANFI 121
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + A + MI +  G II+I S+ G  G  G   Y  SK  ++G+ K+++ E+   GI V
Sbjct: 122 LNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITV 181
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  + + +    L E++R  +A+V             GT     DVA AV FLAS+
Sbjct: 182 NAVAPGFIKSDMT-DKLNEKQR--EAIVQKIPL--------GTYGIPEDVAYAVAFLASN 230
Query: 254 EARYISGTNLMVDGGFTSV 272
            A YI+G  L V+GG   V
Sbjct: 231 NASYITGQTLHVNGGMLMV 249

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score =  121 bits (303), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 129/255 (50%), Gaps = 21/255 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           + AL+TG + GIG S      + G  V +  A  ++     V +      D+F    +V 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 64
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++
Sbjct: 65  DADEVKAXIKEVVSQFGSLDVLVNNAGITRDNL--LXRXKEQEWDDVIDTNLKGVFNCIQ 122
Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
            A    + Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V
Sbjct: 123 KATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAV 182
Query: 197 SPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           +P  + +    A    L E+  T+  +  F          Q T     D+AN V FLASD
Sbjct: 183 APGFIVSDXTDALSDELKEQXLTQIPLARF---------GQDT-----DIANTVAFLASD 228
Query: 254 EARYISGTNLMVDGG 268
           +A+YI+G  + V+GG
Sbjct: 229 KAKYITGQTIHVNGG 243

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score =  121 bits (303), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 131/268 (48%), Gaps = 21/268 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFF 70
           ++  G+V L+TG    IG +T     + G  + + D+     ++   S+   G E  ++ 
Sbjct: 3   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 62
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
           C  DVT EE V   VD  V  FG +D + NNAG  GA  P +++    +F +V  INV G
Sbjct: 63  C--DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAP-VQDYPSDDFARVLTINVTG 119
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            FH +K  +R MI Q  G I++  S+AG  G     AY  SK A++ L +  A +L  Y 
Sbjct: 120 AFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYN 179
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA---------- 240
           IRVN +SP  +  G     + E +    A VG + F + +  +   ++            
Sbjct: 180 IRVNAISPGYMGPGF----MWERQVELQAKVGSQYF-STDPKVVAQQMIGSVPMRRYGDI 234
Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
           N++   V FL  D++ +++G NL + GG
Sbjct: 235 NEIPGVVAFLLGDDSSFMTGVNLPIAGG 262

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 130/255 (50%), Gaps = 17/255 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG          +V
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM--ALNV 67
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E + + +    ++FG +DI+VNNAGI+      +      E+  + + N+  +F   
Sbjct: 68  TNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R M+ + +G II++ SV G +G  G   Y  +K  V+G  K++A E+   G+ VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V+P A+ T +  A L +E+RT           A  A +    L    ++A+AV FLAS E
Sbjct: 186 VAPGAIETDMTKA-LNDEQRT-----------ATLAQVPAGRLGDPREIASAVAFLASPE 233
Query: 255 ARYISGTNLMVDGGF 269
           A YI+G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 128/258 (49%), Gaps = 20/258 (7%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC---QSLGGEPDTFFC 71
           RL G+ A+ITG   GIG+     F   GA V ++D+  +    V    Q LGG+   F C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ--AFAC 65
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            CD+T E+++ +  D  + K G +DI+VNNAG  G P P   +  +++F + +++NV   
Sbjct: 66  RCDITSEQELSALADFAISKLGKVDILVNNAG-GGGPKP--FDMPMADFRRAYELNVFSF 122
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           FH  +  A  M     G I++I S+A     +   +Y  SK A   L +N+A +LG+  I
Sbjct: 123 FHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182
Query: 192 RVNCVSPYAVAT-GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           RVN ++P A+ T  L     PE E+        R                 D+ANA LFL
Sbjct: 183 RVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLG-----------QPQDIANAALFL 231
Query: 251 ASDEARYISGTNLMVDGG 268
            S  A ++SG  L V GG
Sbjct: 232 CSPAASWVSGQILTVSGG 249

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 127/255 (49%), Gaps = 15/255 (5%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G++AL+TG + GIG +        GAKV      +N  Q +   LG          +VT 
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML--NVTD 62
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
              + S ++    +FG +DI+VNNAGI+      +R  D  E+  + + N+  VF   K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNLL-MRMKD-EEWNDIIETNLSSVFRLSKA 120
Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
             R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A E+   GI VN V+
Sbjct: 121 VMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA 180
Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY 257
           P  + T +  A L +++R      G    V       G    A ++ANAV FLASDEA Y
Sbjct: 181 PGFIETDMTRA-LSDDQRA-----GILAQVP-----AGRLGGAQEIANAVAFLASDEAAY 229
Query: 258 ISGTNLMVDGGFTSV 272
           I+G  L V+GG   V
Sbjct: 230 ITGETLHVNGGMYMV 244

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 19/257 (7%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L  R+AL+TG + GIG +        GAKV +  A       + V        + F    
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV++E +V +     +E++G LD++VNNAGI+        + D  +++ V D+N+ GVF 
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRD--DWQSVLDLNLGGVFL 143
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + AA+IM+ Q  G II+I SV G +G  G   Y+ +K  V+GL K VA EL   GI V
Sbjct: 144 CSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITV 203
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  +AT +  + L  E+  E   +G                 A +VA  V FLA+D
Sbjct: 204 NAVAPGFIATDMT-SELAAEKLLEVIPLGRYG-------------EAAEVAGVVRFLAAD 249
Query: 254 -EARYISGTNLMVDGGF 269
             A YI+G  + +DGG 
Sbjct: 250 PAAAYITGQVINIDGGL 266

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 129/255 (50%), Gaps = 17/255 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG          +V
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM--ALNV 67
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E + + +    ++FG +DI+VNNAGI+      +      E+  + + N+  +F   
Sbjct: 68  TNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R M+ + +G II++ SV G +G  G   Y  +K  V+G  K++A E+   G+ VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V+P  + T +  A L +E+RT           A  A +    L    ++A+AV FLAS E
Sbjct: 186 VAPGFIETDMTKA-LNDEQRT-----------ATLAQVPAGRLGDPREIASAVAFLASPE 233
Query: 255 ARYISGTNLMVDGGF 269
           A YI+G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 136/257 (52%), Gaps = 15/257 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L GR AL+TG   G+GE+  R  H  GA V +   ++   +++   LG     F    ++
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELG--ERIFVFPANL 62
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  E V +      E+ G +DI+VNNAGI+      +R +D  +++ V  +N+  VF+  
Sbjct: 63  SDREAVKALGQKAEEEMGGVDILVNNAGIT-RDGLFVRMSD-EDWDAVLTVNLTSVFNLT 120
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M+ +  G II+I S+ G  G  G   Y  SK  ++G +K++A E+    + VNC
Sbjct: 121 RELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNC 180
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           ++P  + + +    L E+++  DA++G       N  M+   + A D+A AV++LASDEA
Sbjct: 181 IAPGFIESAMT-GKLNEKQK--DAIMG-------NIPMKRMGVGA-DIAAAVVYLASDEA 229
Query: 256 RYISGTNLMVDGGFTSV 272
            Y++G  L V+GG   +
Sbjct: 230 AYVTGQTLHVNGGMAMI 246

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 136/257 (52%), Gaps = 15/257 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L GR AL+TG   G+GE+  R  H  GA V +   ++   +++   LG     F    ++
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELG--ERIFVFPANL 65
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  E V +      E+ G +DI+VNNAGI+      +R +D  +++ V  +N+  VF+  
Sbjct: 66  SDREAVKALGQKAEEEMGGVDILVNNAGIT-RDGLFVRMSD-EDWDAVLTVNLTSVFNLT 123
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M+ +  G II+I S+ G  G  G   Y  SK  ++G +K++A E+    + VNC
Sbjct: 124 RELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNC 183
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           ++P  + + +    L E+++  DA++G       N  M+   + A D+A AV++LASDEA
Sbjct: 184 IAPGFIESAMT-GKLNEKQK--DAIMG-------NIPMKRMGVGA-DIAAAVVYLASDEA 232
Query: 256 RYISGTNLMVDGGFTSV 272
            Y++G  L V+GG   +
Sbjct: 233 AYVTGQTLHVNGGMAMI 249

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L  +V ++TG + GIG +    F   G+KV    + D           GE       CDV
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP----------GEAKYDHIECDV 55
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  + V +++D   +++G++ ++VNNAGI       I    + E+ ++ D+N+ G ++  
Sbjct: 56  TNPDQVKASIDHIFKEYGSISVLVNNAGIES--YGKIESMSMGEWRRIIDVNLFGYYYAS 113
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K A   MI     +I++I SV  +I      AY  SKHAV+GL K++A +     +R N 
Sbjct: 114 KFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNA 172
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL------TANDVANAVLF 249
           V P  + T L +    E E   D M      + +  +  G E          +VA+AV F
Sbjct: 173 VCPATIDTPL-VRKAAELEVGSDPM-----RIEKKISEWGHEHPMQRIGKPQEVASAVAF 226
Query: 250 LASDEARYISGTNLMVDGGFT 270
           LAS EA +I+GT L VDGG +
Sbjct: 227 LASREASFITGTCLYVDGGLS 247

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L  +V ++TG + GIG +    F   G+KV    + D           GE       CDV
Sbjct: 13  LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP----------GEAKYDHIECDV 62
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  + V +++D   +++G++ ++VNNAGI       I    + E+ ++ D+N+ G ++  
Sbjct: 63  TNPDQVKASIDHIFKEYGSISVLVNNAGIES--YGKIESMSMGEWRRIIDVNLFGYYYAS 120
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K A   MI     +I++I SV  +I      AY  SKHAV+GL K++A +     +R N 
Sbjct: 121 KFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNA 179
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL------TANDVANAVLF 249
           V P  + T L +    E E   D M      + +  +  G E          +VA+AV F
Sbjct: 180 VCPATIDTPL-VRKAAELEVGSDPM-----RIEKKISEWGHEHPMQRIGKPQEVASAVAF 233
Query: 250 LASDEARYISGTNLMVDGGFT 270
           LAS EA +I+GT L VDGG +
Sbjct: 234 LASREASFITGTCLYVDGGLS 254

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 127/255 (49%), Gaps = 15/255 (5%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G++AL+TG + GIG +        GAKV      +N  Q +   LG          +VT 
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML--NVTD 62
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
              + S ++    +FG +DI+VNNAGI+      +R  D  E+  + + N+  VF   K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNLL-MRMKD-EEWNDIIETNLSSVFRLSKA 120
Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
             R M+ +  G II+I SV G +G  G   +  +K  ++G +K++A E+   GI VN V+
Sbjct: 121 VMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVA 180
Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY 257
           P  + T +  A L +++R      G    V       G    A ++ANAV FLASDEA Y
Sbjct: 181 PGFIETDMTRA-LSDDQRA-----GILAQVP-----AGRLGGAQEIANAVAFLASDEAAY 229
Query: 258 ISGTNLMVDGGFTSV 272
           I+G  L V+GG   V
Sbjct: 230 ITGETLHVNGGMYMV 244

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 132/261 (50%), Gaps = 18/261 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFC 71
           L GRVAL+TGG+ G+G    +   + G  V +A    +      Q++ +  G E   F  
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF-- 76
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            CDV+  E+V   ++   EKFG LD +VN AGI+     +  E  L EF +V ++N+ G 
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAE--EFPLDEFRQVIEVNLFGT 134
Query: 132 FHGMKHAARIMIPQTKGTIISICSVA-GAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           ++  + A  ++      +II+I S+    +      AY  SK  V  L K +A E G+YG
Sbjct: 135 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 194
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVN ++P    T +  A   + E+         +++ +   + G      D+    +FL
Sbjct: 195 IRVNVIAPGWYRTKMTEAVFSDPEKL--------DYMLKRIPL-GRTGVPEDLKGVAVFL 245
Query: 251 ASDEARYISGTNLMVDGGFTS 271
           AS+EA+Y++G  + VDGG+T+
Sbjct: 246 ASEEAKYVTGQIIFVDGGWTA 266

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score =  114 bits (284), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 133/261 (50%), Gaps = 17/261 (6%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
           RL  RVA++TGGA  IG + V    + GA+V IAD+ + +  +  + L  E  D      
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS--EFEKVFDINVKGV 131
           DVT  E V +AV    E+ G +DI+V  AGI      +++  D++  ++ K  DIN+ G+
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGIC---ISEVKAEDMTDGQWLKQVDINLNGM 126
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKY 189
           F   +   RIM+ Q +G I++I S++G I        AY  SK  V    +++AAE   +
Sbjct: 127 FRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPH 186
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIR N V+P  + T L    + + E  +  + G            G     ++VA+ V F
Sbjct: 187 GIRANAVAPTYIETTLTRFGMEKPELYDAWIAG---------TPMGRVGQPDEVASVVQF 237
Query: 250 LASDEARYISGTNLMVDGGFT 270
           LASD A  ++G  + VD GFT
Sbjct: 238 LASDAASLMTGAIVNVDAGFT 258

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  114 bits (284), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 17/255 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG          +V
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM--ALNV 67
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E + + +    ++FG +DI+VNNAGI+      +      E+  + + N+  +F   
Sbjct: 68  TNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R M+ + +G II++ SV G +G  G   +  +K  V+G  K++A E+   G+ VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V+P  + T +  A L +E+RT           A  A +    L    ++A+AV FLAS E
Sbjct: 186 VAPGFIETDMTKA-LNDEQRT-----------ATLAQVPAGRLGDPREIASAVAFLASPE 233
Query: 255 ARYISGTNLMVDGGF 269
           A YI+G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 17/255 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG          +V
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM--ALNV 67
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E + + +    ++FG +DI+VNNA I+      +      E+  + + N+  +F   
Sbjct: 68  TNPESIEAVLKAITDEFGGVDILVNNAAITRDNL--LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R M+ + +G II++ SV G +G  G   Y  +K  V+G  K++A E+   G+ VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V+P  + T +  A L +E+RT           A  A +    L    ++A+AV FLAS E
Sbjct: 186 VAPGFIETDMTKA-LNDEQRT-----------ATLAQVPAGRLGDPREIASAVAFLASPE 233
Query: 255 ARYISGTNLMVDGGF 269
           A YI+G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 17/255 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG          +V
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM--ALNV 67
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E + + +    ++FG +DI+VNNA I+      +      E+  + + N+  +F   
Sbjct: 68  TNPESIEAVLKAITDEFGGVDILVNNADITRDNL--LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R M+ + +G II++ SV G +G  G   Y  +K  V+G  K++A E+   G+ VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V+P  + T +  A L +E+RT           A  A +    L    ++A+AV FLAS E
Sbjct: 186 VAPGFIETDMTKA-LNDEQRT-----------ATLAQVPAGRLGDPREIASAVAFLASPE 233
Query: 255 ARYISGTNLMVDGGF 269
           A YI+G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score =  112 bits (280), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 22/263 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL----GQQVCQSLGGEPDTFFC 71
           L  +V +ITGG+TG+G +    F +  AKV I    +       ++  +  GG+      
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQ--AIIV 70
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DVTKEEDV + V   +++FGTLD+M+NNAG+   P P   E  L  + KV D N+ G 
Sbjct: 71  QGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVEN-PVPS-HELSLDNWNKVIDTNLTGA 128
Query: 132 FHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           F G + A +  +    KG +I++ SV   I       Y  SK  +  + + +A E    G
Sbjct: 129 FLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKG 188
Query: 191 IRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           IRVN + P A+ T +       P +    ++M+    ++ +            +VA    
Sbjct: 189 IRVNNIGPGAMNTPINAEKFADPVQRADVESMIPM-GYIGK----------PEEVAAVAA 237
Query: 249 FLASDEARYISGTNLMVDGGFTS 271
           FLAS +A Y++G  L  DGG T 
Sbjct: 238 FLASSQASYVTGITLFADGGMTK 260

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 22/263 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL----GQQVCQSLGGEPDTFFC 71
           L  +V +ITGG+TG+G +    F +  AKV I    +       ++  +  GG+      
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQ--AIIV 70
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DVTKEEDV + V   +++FGTLD+M+NNAG+   P P   E  L  + KV D N+ G 
Sbjct: 71  QGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVEN-PVPS-HELSLDNWNKVIDTNLTGA 128
Query: 132 FHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           F G + A +  +    KG +I++ SV   I       Y  SK  +  + + +A E    G
Sbjct: 129 FLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKG 188
Query: 191 IRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           IRVN + P A+ T +       P +    ++M+    ++ +            +VA    
Sbjct: 189 IRVNNIGPGAMNTPINAEKFADPVQRADVESMIPM-GYIGK----------PEEVAAVAA 237
Query: 249 FLASDEARYISGTNLMVDGGFTS 271
           FLAS +A Y++G  L  DGG T 
Sbjct: 238 FLASSQASYVTGITLFADGGMTK 260

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 22/263 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL----GQQVCQSLGGEPDTFFC 71
           L  +V +ITGG+TG+G +    F +  AKV I    +       ++  +  GG+      
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQ--AIIV 70
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DVTKEEDV + V   +++FGTLD+M+NNAG+   P P   E  L  + KV D N+ G 
Sbjct: 71  QGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVEN-PVPS-HELSLDNWNKVIDTNLTGA 128
Query: 132 FHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           F G + A +  +    KG +I++ SV   I       Y  SK  +  + + +A E    G
Sbjct: 129 FLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKG 188
Query: 191 IRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           IRVN + P A+ T +       P +    ++M+    ++ +            +VA    
Sbjct: 189 IRVNNIGPGAMNTPINAEKFADPVQRADVESMIPM-GYIGK----------PEEVAAVAA 237
Query: 249 FLASDEARYISGTNLMVDGGFTS 271
           FLAS +A Y++G  L  DGG T 
Sbjct: 238 FLASSQASYVTGITLFADGGMTK 260

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 18/259 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCD 74
           L G+ ALITG +TGIG+     + + GA+V +A    +  Q V   + G         CD
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT+ + V   +D    + G +DI V NAGI       + +  L EF+++ D NV GVF  
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA--MLDMPLEEFQRIQDTNVTGVFLT 147
Query: 135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHA--YTGSKHAVLGLNKNVAAELGKYGI 191
            + AAR M+ Q   GTII+  S++G I  +      Y  SK AV+ L K +A EL  + I
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQI 207
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN VSP  + T L        E   D    +   +      +  ELT        L+LA
Sbjct: 208 RVNSVSPGYIRTELV-------EPLADYHALWEPKIPLGRMGRPEELT-----GLYLYLA 255
Query: 252 SDEARYISGTNLMVDGGFT 270
           S  + Y++G+++++DGG+T
Sbjct: 256 SAASSYMTGSDIVIDGGYT 274

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 127/265 (47%), Gaps = 31/265 (11%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF----- 69
           +L G+ A++TG + G+G++        GA + +       G     SL    + F     
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLN------GSPASTSLDATAEEFKAAGI 55
Query: 70  ---FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVF 124
                  DV   EDV + V   ++ FG +DI+VNNAGI+     D     +SE  ++ V 
Sbjct: 56  NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGIT----RDTLMLKMSEKDWDDVL 111
Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           + N+K  +   K  ++IM+ Q  G II+I S+AG IG  G   Y  SK  ++G  K++A 
Sbjct: 112 NTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAK 171
Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E    GI  N V+P  + T +    LP++ +     +   N   +         T  +VA
Sbjct: 172 EFAAKGIYCNAVAPGIIKTDMT-DVLPDKVKE----MYLNNIPLKRFG------TPEEVA 220
Query: 245 NAVLFLASDEARYISGTNLMVDGGF 269
           N V FLASD++ YI+G  + +DGG 
Sbjct: 221 NVVGFLASDDSNYITGQVINIDGGL 245

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 127/264 (48%), Gaps = 22/264 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTF 69
           + L G+V +ITG +TG+G+S    F    AKV +     + + N   +  + +GGE    
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE--AI 60
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               DVT E DV + V   +++FG LD+M+NNAG+   P     E  LS++ KV D N+ 
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSS-HEMSLSDWNKVIDTNLT 118
Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + K +A E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAP 178
Query: 189 YGIRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            GIRVN + P A+ T +       PE+    ++M+             G      ++A  
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-----------GYIGEPEEIAAV 227
Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
             +LAS EA Y++G  L  DGG T
Sbjct: 228 AAWLASSEASYVTGITLFADGGMT 251

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 133/256 (51%), Gaps = 22/256 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           V ++TG + GIG++      K G KV +     A   + + +Q+ ++ GG+  TF    D
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI-EAYGGQAITF--GGD 59
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+KE DV + +   ++ +GT+D++VNNAGI+      +     S++++V D+N+ GVF  
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLC 117
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            + A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A E     I VN
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA-SD 253
            V P  +A+ +  A L E+   E  ++G            G      +VA  V FLA S 
Sbjct: 178 VVCPGFIASDMT-AKLGED--MEKKILGTIPL--------GRTGQPENVAGLVEFLALSP 226
Query: 254 EARYISGTNLMVDGGF 269
            A YI+G    +DGG 
Sbjct: 227 AASYITGQAFTIDGGI 242

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 12/265 (4%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD--VQDNLGQQVCQSLGGEPDTFFC 71
           Q    + A+ITG  +GIG +  R   K GA + +      D +     +  G    T   
Sbjct: 21  QSXXTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH 80
Query: 72  H-CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
           H  D TK  ++        ++FG  DI+VNNAG+       I +  + +++++  +N+  
Sbjct: 81  HPADXTKPSEIADXXAXVADRFGGADILVNNAGVQF--VEKIEDFPVEQWDRIIAVNLSS 138
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            FH ++ A      +  G II+I S  G +      AY  +KH + GL K VA E+ + G
Sbjct: 139 SFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESG 198
Query: 191 IRVNCVSPYAVATGLALAHLPEEER----TEDAMVGFRNFVARNANMQGTELTANDVANA 246
           + VN + P  V T L    +P++ R    TE+ ++   N V          +T   VA+ 
Sbjct: 199 VTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVI---NEVXLKGQPTKKFITVEQVASL 255
Query: 247 VLFLASDEARYISGTNLMVDGGFTS 271
            L+LA D+A  I+GT++  DGG+T+
Sbjct: 256 ALYLAGDDAAQITGTHVSXDGGWTA 280

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 128/264 (48%), Gaps = 22/264 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTF 69
           + L G+V +ITG +TG+G+S    F    AKV +     + + N   +  + +GGE    
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE--AI 60
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               DVT E DV + V   +++FG LD+M+NNAG++  P     E  LS++ KV D N+ 
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLAN-PVSS-HEMSLSDWNKVIDTNLT 118
Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + + +A E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178
Query: 189 YGIRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            GIRVN + P A+ T +       PE+    ++M+             G      ++A  
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-----------GYIGEPEEIAAV 227
Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
             +LAS EA Y++G  L  DGG T
Sbjct: 228 AAWLASSEASYVTGITLFADGGMT 251

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 127/264 (48%), Gaps = 22/264 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTF 69
           + L G+V +ITG +TG+G+S    F    AKV +     + + N   +  + +GGE    
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE--AI 60
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               DVT E DV + V   +++FG LD+M+NNAG+   P     E  LS++ KV D N+ 
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSS-HEMSLSDWNKVIDTNLT 118
Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + + +A E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178
Query: 189 YGIRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            GIRVN + P A+ T +       PE+    ++M+             G      ++A  
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-----------GYIGEPEEIAAV 227
Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
             +LAS EA Y++G  L  DGG T
Sbjct: 228 AAWLASSEASYVTGITLFADGGMT 251

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 127/264 (48%), Gaps = 22/264 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTF 69
           + L G+V +ITG +TG+G+S    F    AKV +     + + N   +  + +GGE    
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE--AI 60
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               DVT E DV + V   +++FG LD+M+NNAG+   P     E  LS++ KV D N+ 
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSS-HEMSLSDWNKVIDTNLT 118
Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + + +A E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178
Query: 189 YGIRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            GIRVN + P A+ T +       PE+    ++M+             G      ++A  
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-----------GYIGEPEEIAAV 227
Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
             +LAS EA Y++G  L  DGG T
Sbjct: 228 AAWLASSEASYVTGITLFADGGMT 251

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 22/260 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VA++TG   GIG +  R     G  V  AD+  +        +G       C  DV
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG--CGAAACRVDV 84
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           + E+ + + VD  V  FG +D +V NAG+       + +  + +F++V  IN++G +   
Sbjct: 85  SDEQQIIAMVDACVAAFGGVDKLVANAGV--VHLASLIDTTVEDFDRVIAINLRGAWLCT 142
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           KHAA  MI +  G I+++ S+AG +   G  AY  SK  ++ L++  AAEL   GIR N 
Sbjct: 143 KHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNT 202
Query: 196 VSPYAVATGLALAHLPEEERTEDAMV-------GFRNFVARNANMQGTELTANDVANAVL 248
           + P  V T +        ++T  AM        G R+ +AR   +QG      ++A  V+
Sbjct: 203 LLPAFVDTPM--------QQTAMAMFDGALGAGGARSMIAR---LQGRMAAPEEMAGIVV 251
Query: 249 FLASDEARYISGTNLMVDGG 268
           FL SD+A  I+GT  + DGG
Sbjct: 252 FLLSDDASMITGTTQIADGG 271

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 121/238 (50%), Gaps = 19/238 (7%)
Query: 35  VRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT 94
           VR F   GA+V I D  ++ G+ + Q L   P   F  CDVT+E+DV + V  T+ +FG 
Sbjct: 26  VRAFVNSGARVVICDKDESGGRALEQEL---PGAVFILCDVTQEDDVKTLVSETIRRFGR 82
Query: 95  LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC 154
           LD +VNNAG    P     E     F ++ ++N+ G +   K A   +  +++G +I+I 
Sbjct: 83  LDCVVNNAG-HHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR-KSQGNVINIS 140
Query: 155 SVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA--LAHLPE 212
           S+ GAIG      Y  +K AV  + K +A +   YG+RVNC+SP  + T L   LA L  
Sbjct: 141 SLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMP 200
Query: 213 EERT--EDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
           + R    + M+         A   G      +V  A +FLAS EA + +G  L+V GG
Sbjct: 201 DPRASIREGML---------AQPLGRMGQPAEVGAAAVFLAS-EANFCTGIELLVTGG 248

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 134/279 (48%), Gaps = 33/279 (11%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV---QDNLG--QQVCQSLGGEPD-- 67
           R+ G+VA I+G A G G S      + GA +   D+    +NL       + L    D  
Sbjct: 12  RVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLV 71
Query: 68  ------TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSE 119
                       DV   E + SAVD  VE+ G LDI+V NAG+   G     IR+   + 
Sbjct: 72  KDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRD---NV 128
Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           ++ + DIN+ GV+H +K     ++   +G +I+   SV G         Y  +KH V+GL
Sbjct: 129 WQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGL 188
Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLAL------AHLPEEERTEDAMVGFRNFVARNAN 232
            +  A ELG + IRVN V P  V+T + +         P+ E       G  +F   +  
Sbjct: 189 MRAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENP-----GPDDFAPISQM 243
Query: 233 MQGTELT---ANDVANAVLFLASDEARYISGTNLMVDGG 268
           M    +    A+D++NAVLFLASDE+RY++G +L VD G
Sbjct: 244 MHTLPVPWVDASDISNAVLFLASDESRYVTGVSLPVDAG 282

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 13/214 (6%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC 71
           AV+ + G VA+ITGGA+G+G ST +     GA   + DV ++ G+   + LGG  +  F 
Sbjct: 4   AVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGG--NCIFA 61
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD----LSEFEKVFDIN 127
             +VT E++V +A+ L  EKFG +D+ VN AGI+ A      + +    L +F++V ++N
Sbjct: 62  PANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVN 121
Query: 128 VKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + G F+ ++  A +M          +G II+  SVA   G +G  AY+ SK  ++G+   
Sbjct: 122 LIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 181
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 215
           +A +L   GIRV  ++P   AT L L  LP++ R
Sbjct: 182 IARDLAPIGIRVVTIAPGLFATPL-LTTLPDKVR 214

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 13/214 (6%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC 71
           AV+ + G VA+ITGGA+G+G ST +     GA   + DV ++ G+   + LGG  +  F 
Sbjct: 3   AVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGG--NCIFA 60
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD----LSEFEKVFDIN 127
             +VT E++V +A+ L  EKFG +D+ VN AGI+ A      + +    L +F++V ++N
Sbjct: 61  PANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVN 120
Query: 128 VKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + G F+ ++  A +M          +G II+  SVA   G +G  AY+ SK  ++G+   
Sbjct: 121 LIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 180
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 215
           +A +L   GIRV  ++P   AT L L  LP++ R
Sbjct: 181 IARDLAPIGIRVVTIAPGLFATPL-LTTLPDKVR 213

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 134/276 (48%), Gaps = 39/276 (14%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFF 70
           R   +VA+ITG + GIG +T  LF + GAKV I    A+  +   QQ+  +   E +   
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-----DLSEFEKVFD 125
              DVT +      +  T+ KFG LDI+VNNA   GA  PD +        +  ++   +
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNA---GAAIPDSQSKTGTAQSIESYDATLN 119
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA------YTGSKHAVLGLN 179
           +N++ V    K A    +  TKG I++I S+A      G HA      Y+ +K A+    
Sbjct: 120 LNLRSVIALTKKAVP-HLSSTKGEIVNISSIAS-----GLHATPDFPYYSIAKAAIDQYT 173
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAH-LPEEERTEDAMVGFRNFVARNANMQ---- 234
           +N A +L ++GIRVN +SP  VATG   A  +PEE          + F +  A M+    
Sbjct: 174 RNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETS--------KKFYSTMATMKECVP 225
Query: 235 -GTELTANDVANAVLFLASDE-ARYISGTNLMVDGG 268
            G      D+A  + FLA  + + YI G  L+VDGG
Sbjct: 226 AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG 261

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 131/281 (46%), Gaps = 38/281 (13%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV---QDNLGQQVCQSLGGEPDTFFC 71
           RL G+VA ITG A G G +      + GA +   D+   Q NL         G P+    
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNL-----DYAQGSPEELKE 97
Query: 72  HCDVTKEE------------DVCS---AVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD 116
              + +E+            D+ S    VD  + +FG +DI+V+N GIS     ++    
Sbjct: 98  TVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQG--EVVSLT 155
Query: 117 LSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAV 175
             ++  +   N+ G +H  +     MI + +G ++I + S  G  G  G   Y  SKH V
Sbjct: 156 DQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGV 215
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAH------LP--EEERTEDAMVGFRNFV 227
            GL  ++A E+G++ IRVN V+P AV T +AL        LP  E    EDA   F    
Sbjct: 216 QGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLT 275
Query: 228 ARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
                +    +   DV+NAV +LASDEARYI G  + VDGG
Sbjct: 276 L----LPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score =  108 bits (270), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 119/214 (55%), Gaps = 13/214 (6%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC 71
           AV+ + G VA+ITGGA+G+G ST +     GA   + DV ++ G+   + LGG  +  F 
Sbjct: 4   AVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGG--NCIFA 61
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD----LSEFEKVFDIN 127
             +VT E++V +A+ L  EKFG +D+ VN AGI+ A      + +    L +F++V ++N
Sbjct: 62  PANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVN 121
Query: 128 VKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + G F+ ++  A +M          +G II+  SVA   G +G  AY+ SK  ++G+   
Sbjct: 122 LIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 181
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 215
           +A +L   GIRV  ++P   AT L L  LP+  R
Sbjct: 182 IARDLAPIGIRVVTIAPGLFATPL-LTTLPDTVR 214

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 125/256 (48%), Gaps = 18/256 (7%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL  +  LITG A GIG +T+ LF K GA++   D+++   ++  +++G  P       D
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP----VVXD 57
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V     V       +   G LD +V+ AGI+        +  L ++E V  +N+ G F  
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFH--WKXPLEDWELVLRVNLTGSFLV 115
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K A+     +  G+I+   S    +G LG   Y  S   V+GL + +A ELG++GIRVN
Sbjct: 116 AKAASEAXREKNPGSIVLTASRV-YLGNLGQANYAASXAGVVGLTRTLALELGRWGIRVN 174
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            ++P  + T    A +PE+ R        +   A      G  L   +VA A LFL SDE
Sbjct: 175 TLAPGFIET-RXTAKVPEKVRE-------KAIAATPLGRAGKPL---EVAYAALFLLSDE 223
Query: 255 ARYISGTNLMVDGGFT 270
           + +I+G  L VDGG T
Sbjct: 224 SSFITGQVLFVDGGRT 239

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 125/254 (49%), Gaps = 17/254 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG   +      +V
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG--DNGKGXALNV 64
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E + + +    ++FG +DI+VNNAGI+      +      E+  + + N+  +F   
Sbjct: 65  TNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LXRXKEEEWSDIXETNLTSIFRLS 122
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R    + +G II++ SV G  G  G   Y  +K  V+G  K+ A E+   G+ VN 
Sbjct: 123 KAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVNT 182
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V+P  + T    A L +E+RT           A  A +    L    ++A+AV FLAS E
Sbjct: 183 VAPGFIETDXTKA-LNDEQRT-----------ATLAQVPAGRLGDPREIASAVAFLASPE 230
Query: 255 ARYISGTNLMVDGG 268
           A YI+G  L V+GG
Sbjct: 231 AAYITGETLHVNGG 244

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score =  107 bits (267), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 123/257 (47%), Gaps = 12/257 (4%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDV 75
           +VAL+TG   GIG++      K G  V IAD  D   + V   +   GG         DV
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH--AVAVKVDV 60
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  + V +AV+   +  G  D++VNNAG+  AP   I        +KV++INVKGV  G+
Sbjct: 61  SDRDQVFAAVEQARKTLGGFDVIVNNAGV--APSTPIESITPEIVDKVYNINVKGVIWGI 118
Query: 136 KHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           + A      +  G  II+ CS AG +G      Y+ SK AV GL +  A +L   GI VN
Sbjct: 119 QAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVN 178
Query: 195 CVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
              P  V T +   +     E   +    G   F  R    + +E    DVA  V +LAS
Sbjct: 179 GYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSE--PEDVAACVSYLAS 236
Query: 253 DEARYISGTNLMVDGGF 269
            ++ Y++G +L++DGG 
Sbjct: 237 PDSDYMTGQSLLIDGGM 253

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score =  106 bits (264), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 116/252 (46%), Gaps = 25/252 (9%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-HCDVTK 77
           R  L+TGG  GIG +  R F   G KV I               G  P+ F    CD+T 
Sbjct: 22  RSVLVTGGNRGIGLAIARAFADAGDKVAI-----------TYRSGEPPEGFLAVKCDITD 70
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            E V  A     E  G +++++ NAG++      +      +F  V + N+ G F  +K 
Sbjct: 71  TEQVEQAYKEIEETHGPVEVLIANAGVTKDQL--LMRMSEEDFTSVVETNLTGTFRVVKR 128
Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
           A R M+   KG ++ I SV G +G  G   Y  SK  ++G  +++A ELG   I  N V+
Sbjct: 129 ANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVA 188
Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY 257
           P  V T +    L +E+R         N V++     G      ++A  V FLASD+A Y
Sbjct: 189 PGFVDTDMTKV-LTDEQRA--------NIVSQVP--LGRYARPEEIAATVRFLASDDASY 237
Query: 258 ISGTNLMVDGGF 269
           I+G  + VDGG 
Sbjct: 238 ITGAVIPVDGGL 249

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 120/257 (46%), Gaps = 16/257 (6%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGGEPDTFFCH 72
           QRL  ++A+ITGGA GIG +    F   GA + IAD V     +   ++LG    T    
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLT--VK 60
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDV++  DV +     +  FG  DI+VNNAGI   P     E    +++K F+INV   F
Sbjct: 61  CDVSQPGDVEAFGKQVISTFGRCDILVNNAGIY--PLIPFDELTFEQWKKTFEINVDSGF 118
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K     M     G II++ S    +       Y  +K A +G  + +A++LGK GI 
Sbjct: 119 LMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGIT 178
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVG-FRNFVARNANMQGTELTANDVANAVLFLA 251
           VN ++P  V T         E     AM     N +     +Q       D+  A  FLA
Sbjct: 179 VNAIAPSLVRTATT------EASALSAMFDVLPNMLQAIPRLQ----VPLDLTGAAAFLA 228
Query: 252 SDEARYISGTNLMVDGG 268
           SD+A +I+G  L VDGG
Sbjct: 229 SDDASFITGQTLAVDGG 245

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 133/262 (50%), Gaps = 17/262 (6%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +RL G+ ALITG A GIG +    + + GA V IAD+     +Q    +G  P  +    
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG--PAAYAVQX 61
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDI-READLSEFEKVFDINVKGV 131
           DVT+++ + +A+  TVE  G LDI+VNNA +   AP  +I RE+    +EK+F INV G 
Sbjct: 62  DVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRES----YEKLFAINVAGT 117
Query: 132 FHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
              ++ AAR  I Q + G II+  S AG  G      Y  +K AV+ L ++   +L K+ 
Sbjct: 118 LFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHR 177
Query: 191 IRVNCVSPYAVATGLALAHLPEEE----RTEDAMVGFRNFVARNANMQGTELTANDVANA 246
           I VN ++P  V  G    H    +    R E+   G +  +   A   G   TA D+   
Sbjct: 178 INVNAIAP-GVVDG---EHWDGVDALFARYENRPRGEKKRLVGEAVPFGRXGTAEDLTGX 233
Query: 247 VLFLASDEARYISGTNLMVDGG 268
            +FLAS E+ YI      VDGG
Sbjct: 234 AIFLASAESDYIVSQTYNVDGG 255

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 131/256 (51%), Gaps = 22/256 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVC-IADVQ---DNLGQQVCQS-LGGEPDTFFCHC 73
           +VA++TG + GIG +      + GA V   A  +   + +G    Q+ L G         
Sbjct: 29  QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL---- 84
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           +V     V + V+ T+++FG L+++VNNAGI+      +R  D  E++ V D N+K VF 
Sbjct: 85  NVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLA-MRMKD-DEWDAVIDTNLKAVFR 142
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +   R M+    G I++I SV G+ G  G   Y  +K  V G+ + +A E+G  GI V
Sbjct: 143 LSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITV 202
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           NCV+P  + T +    LP+E++T            +     G   +  D+A+AV FLAS 
Sbjct: 203 NCVAPGFIDTDMT-KGLPQEQQT----------ALKTQIPLGRLGSPEDIAHAVAFLASP 251
Query: 254 EARYISGTNLMVDGGF 269
           +A YI+GT L V+GG 
Sbjct: 252 QAGYITGTTLHVNGGM 267

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 132/257 (51%), Gaps = 28/257 (10%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDVT 76
           VA++TG A GIG +    F K GA V + D++    + V  ++   GG+       C+VT
Sbjct: 14  VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK--AIGLECNVT 71
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            E+   + +   +++FG + ++VNNAG  G P P   +  +S+FE  F +N+  +F   +
Sbjct: 72  DEQHREAVIKAALDQFGKITVLVNNAG-GGGPKP--FDMPMSDFEWAFKLNLFSLFRLSQ 128
Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
            AA  M     G I++I S+AG    +   +Y  SK AV  L +N+A ++G  GIRVN +
Sbjct: 129 LAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAI 188
Query: 197 SPYAVAT-GLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLA 251
           +P A+ T  LA    PE ER               A ++ T L     A D+ANA LFL 
Sbjct: 189 APGAIKTDALATVLTPEIER---------------AMLKHTPLGRLGEAQDIANAALFLC 233
Query: 252 SDEARYISGTNLMVDGG 268
           S  A +ISG  L V GG
Sbjct: 234 SPAAAWISGQVLTVSGG 250

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 117/217 (53%), Gaps = 17/217 (7%)
Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-QVCQSL 62
           +N    +P V  L  +V LITG   G+G+   + F K+GAKV + D +D        ++ 
Sbjct: 309 ANDASGAPTVS-LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAA 367
Query: 63  GGE--PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS-- 118
           GGE  PD      DV K+ +    +   ++K+GT+DI+VNNAGI      D   A +S  
Sbjct: 368 GGEAWPD----QHDVAKDSEAI--IKNVIDKYGTIDILVNNAGI----LRDRSFAKMSKQ 417
Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           E++ V  +++ G F+  + A    + +  G II+I S +G  G  G   Y+ SK  +LGL
Sbjct: 418 EWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGL 477
Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 215
           +K +A E  K  I+VN V+P+A  T + L+ + E+++
Sbjct: 478 SKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQDK 513

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 131/265 (49%), Gaps = 24/265 (9%)
Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
           ++    +VA++TGG++GIG + V    ++GAKV    + +     V        D F   
Sbjct: 9   MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVS-------DHF--K 59
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT EE+V  AV+ T +K+G +DI+VNNAGI       +   ++  + ++ D+NV G +
Sbjct: 60  IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEI--WRRIIDVNVNGSY 117
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K+   +M+    G+II+I SV          AY  SKHA+LGL ++VA +     IR
Sbjct: 118 LMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIR 176
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT------ANDVANA 246
            N V P  + T + +    + E  ED      N V R     G +          +VA  
Sbjct: 177 CNAVCPGTIMTPMVI-KAAKMEVGED-----ENAVERKIEEWGRQHPMGRIGRPEEVAEV 230
Query: 247 VLFLASDEARYISGTNLMVDGGFTS 271
           V FLASD + +I+G  L VDGG  S
Sbjct: 231 VAFLASDRSSFITGACLTVDGGLLS 255

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 126/258 (48%), Gaps = 15/258 (5%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +L GR AL+TG   GIGE+  R FH  GA V +   +++  +++   LG   D F    +
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG--KDVFVFSAN 81
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           ++  + +    ++   +   +DI+VNNAGI+      +R  D  +++ V  +N+      
Sbjct: 82  LSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLF-VRMQD-QDWDDVLAVNLTAASTL 139
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            +     M+ +  G II+I S+ G +G  G   Y  +K  ++G +K +A E+    I VN
Sbjct: 140 TRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVN 199
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           C++P  + + +      +++    AM+  +                 ++A A ++LASDE
Sbjct: 200 CIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMG-----------IGEEIAFATVYLASDE 248
Query: 255 ARYISGTNLMVDGGFTSV 272
           A Y++G  L ++GG   +
Sbjct: 249 AAYLTGQTLHINGGMAMI 266

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 124/274 (45%), Gaps = 29/274 (10%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ---------------QVCQ 60
           L G+VA ITG A G G +        GA +   D+ D +                 ++ +
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
            +G          DV   E + +A+   +++ G LDI+V NAGI+     D        +
Sbjct: 71  DIGSR--IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGD------DGW 122
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAG--AIGGLGPHA--YTGSKHAV 175
             V D+N+ GV+H +K A   ++ Q T G+I+ I S AG   +G   P +  Y  +KH V
Sbjct: 123 HDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGV 182
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           +GL +  A  L    IRVN + P  V T +       E   + A          NA M  
Sbjct: 183 VGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNA-MPV 241
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
             L   DVANAV +L SD+ARYI+G  L VD GF
Sbjct: 242 EVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 129/268 (48%), Gaps = 31/268 (11%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+ ALITG A GIG +    + + GA+V IAD+     +     +G  P       D
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG--PAACAIALD 59
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDI-READLSEFEKVFDINVKGVF 132
           VT +  +   V   ++++G++DI+VNNA +   AP  +I RE+    ++++F INV G  
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRES----YDRLFAINVSGTL 115
Query: 133 HGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
             M+  AR MI   + G II++ S AG  G      Y  +K AV+ L ++    L ++GI
Sbjct: 116 FMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGI 175
Query: 192 RVNCVSPYAV---------ATGLALAHLP--EEERTEDAMVGFRNFVARNANMQGTELTA 240
            VN ++P  V         A      +LP  E++R   A V F           G    A
Sbjct: 176 NVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF-----------GRMGRA 224
Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
            D+    +FLA+ EA YI      VDGG
Sbjct: 225 EDLTGMAIFLATPEADYIVAQTYNVDGG 252

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-------------QDNLGQQVCQS 61
           ++ G+VA ITG A G G S      + GA +   DV              D+L + V Q 
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFE 121
                       DV   + + +AVD  V + G LDI++ NA ++      +   D   + 
Sbjct: 85  EALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGT-RLNRMDPKTWR 143
Query: 122 KVFDINVKGVFHGMKHAARIMIP-----QTKGTIISICSVAGAIGGLGPHAYTGSKHAVL 176
            + D+N+ G +      AR+ IP     +  G+I+   S+ G  G      Y  SKH + 
Sbjct: 144 DMIDVNLNGAWI----TARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLH 199
Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAH------LPEEER--TEDAMVGFRNFVA 228
           GL + +A ELG   IRVN V P +VAT + L         P+ E    ED  V  R    
Sbjct: 200 GLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV 259
Query: 229 RNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
               +    +   D++NA+LFL SD+ARYI+G +L VDGG
Sbjct: 260 ----LPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score =  104 bits (259), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----GGEPDTFFCHCD 74
           +VA++TGGA GIG          G  + +AD+     +Q  +++      +    F   D
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQ-EEQAAETIKLIEAADQKAVFVGLD 61
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           VT + +  SA+D   EK G  D++VNNAGI+   P  ++ E DL   ++++ +NV  VF 
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDL---KQIYSVNVFSVFF 118
Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           G++ A+R       KG II+  S+A   G     AY+ +K AV GL +  A EL   G  
Sbjct: 119 GIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHT 178
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ-GTELTANDVANAVLFLA 251
           VN  +P  V TG+      E  +     +G  NF   ++++  G      DVA  V FLA
Sbjct: 179 VNAYAPGIVGTGMWEQIDAELSKINGKPIG-ENFKEYSSSIALGRPSVPEDVAGLVSFLA 237
Query: 252 SDEARYISGTNLMVDGG 268
           S+ + Y++G  ++VDGG
Sbjct: 238 SENSNYVTGQVMLVDGG 254

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score =  103 bits (258), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 132/259 (50%), Gaps = 26/259 (10%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHC---- 73
           +VAL+TG   GIG    ++  K  + V CI+  Q     + C S+  E  +F        
Sbjct: 45  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ-----KSCDSVVDEIKSFGYESSGYA 99
Query: 74  -DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV+K+E++   ++  + +   +DI+VNNAGI+        + D  E+E V   N+  +F
Sbjct: 100 GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKND--EWEDVLRTNLNSLF 157
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +  +  ++ MI    G II+I S+ G  G +G   Y+ SK  V+G  K++A EL    I 
Sbjct: 158 YITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNIT 217
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLA 251
           VN ++P  +++ +    + E+ +        +N +   +N+    + T  +VAN   FL+
Sbjct: 218 VNAIAPGFISSDMT-DKISEQIK--------KNII---SNIPAGRMGTPEEVANLACFLS 265
Query: 252 SDEARYISGTNLMVDGGFT 270
           SD++ YI+G   ++DGG +
Sbjct: 266 SDKSGYINGRVFVIDGGLS 284

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score =  103 bits (258), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE 79
           VA++TGGA+G+G +T +     GA+V + D++   G+ V   LG      F   DVT E 
Sbjct: 11  VAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDR--ARFAAADVTDEA 65
Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA--DLSEFEKVFDINVKGVFHGMKH 137
            V SA+DL  E  GTL I+VN AG   A     R+    L+ F K+ DIN+ G F+ ++ 
Sbjct: 66  AVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRL 124
Query: 138 AARIMIP--------QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           AA  +          + +G II+  SVA   G +G  AY+ SK  V+G+   +A +L  +
Sbjct: 125 AAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASH 184
Query: 190 GIRVNCVSPYAVATGLALAHLPEEER 215
            IRV  ++P    T L LA LPEE R
Sbjct: 185 RIRVMTIAPGLFDTPL-LASLPEEAR 209

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 120/262 (45%), Gaps = 10/262 (3%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGE--PDTFFCH 72
           L G+VA++TG  +GIG          GA + +    D    ++V   L  +      +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++K E V   VD  V + G +DI+VNNAGI       I +    +++ +  +N+  VF
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLSAVF 119
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           HG   A   M  Q  G II+I S  G +      AY  +KH V+G  K  A E    GI 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179
Query: 193 VNCVSPYAVATGLA---LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            N + P  V T L    ++ L E+   +           +  ++Q   +T   +    +F
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ--FVTPEQLGGTAVF 237
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           LASD A  I+GT + VDGG+T+
Sbjct: 238 LASDAAAQITGTTVSVDGGWTA 259

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC 71
           A + + G VA+ITGGA+G+G +T       GA   + D+ ++ G+   + LG   +  F 
Sbjct: 4   ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN--NCVFA 61
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREAD---LSEFEKVFDIN 127
             DVT E+DV +A+ L   KFG +D+ VN AGI+  +   ++++     L +F++V D+N
Sbjct: 62  PADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVN 121
Query: 128 VKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + G F+ ++  A  M          +G II+  SVA   G +G  AY+ SK  ++G+   
Sbjct: 122 LMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 181
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 215
           +A +L   GIRV  ++P    T L L  LPE+ R
Sbjct: 182 IARDLAPIGIRVMTIAPGLFGTPL-LTSLPEKVR 214

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 129/261 (49%), Gaps = 14/261 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL---GQQVCQSLGGEPDTFFCH 72
           L G++AL+TG + GIG +    + K GA +   D+   L   G    ++ G     + C 
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVC- 90
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT E+ + + V     + G +DI+VNNAGI     P I E   ++F +V DI++   F
Sbjct: 91  -DVTDEDGIQAMVAQIESEVGIIDILVNNAGII-RRVPMI-EMTAAQFRQVIDIDLNAPF 147
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K     MI +  G II+ICS+   +G     AY  +K  +  L KN+A+E G+  I+
Sbjct: 148 IVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQ 207
Query: 193 VNCVSPYAVATGLALAHLPEEERTED-AMVGFRNF-VARNANMQGTELTANDVANAVLFL 250
            N + P  +AT       P  E  +D +   F  F +A+    +  E  A D+    +FL
Sbjct: 208 CNGIGPGYIATPQT---APLRELQKDGSRHPFDQFIIAKTPAARWGE--AEDLMGPAVFL 262
Query: 251 ASDEARYISGTNLMVDGGFTS 271
           ASD + +++G  L VDGG  +
Sbjct: 263 ASDASNFVNGHILYVDGGILA 283

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 117/252 (46%), Gaps = 30/252 (11%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G++AL+TG + GIG +        GAKV      +N  Q +   LG          +VT 
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML--NVTD 62
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
              + S ++    +FG +DI+VNNAGI+      +R  D  E+  + + N+  VF   K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNLL-MRMKD-EEWNDIIETNLSSVFRLSKA 120
Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
             R M+ +  G II+I          G   Y  +K  ++G +K++A E+   GI VN V+
Sbjct: 121 VMRAMMKKRHGRIITIG---------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVA 171
Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY 257
           P  +            E ++D   G    V       G    A ++ANAV FLASDEA Y
Sbjct: 172 PGFI------------ETSDDQRAGILAQVP-----AGRLGGAQEIANAVAFLASDEAAY 214
Query: 258 ISGTNLMVDGGF 269
           I+G  L V+GG 
Sbjct: 215 ITGETLHVNGGM 226

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
           LITG + GIGE+T RL H  G +V +    +   Q +   L G         DV +E D 
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG---ALPLPGDVREEGDW 65
Query: 82  CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI 141
             AV    E FG L  +VNNAG+ G   P + E  L E+  V D N+ G F G++HA   
Sbjct: 66  ARAVAAMEEAFGELSALVNNAGV-GVMKP-VHELTLEEWRLVLDTNLTGAFLGIRHAVPA 123
Query: 142 MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAV 201
           ++ +  GTI+++ S+AG     G  AY  SK  +LGL      +L +  +RV  V P +V
Sbjct: 124 LLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSV 183
Query: 202 ATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            TG                       A N   Q  +L   DVA AVLF
Sbjct: 184 DTGF----------------------AGNTPGQAWKLKPEDVAQAVLF 209

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 127/269 (47%), Gaps = 24/269 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT------- 68
           L G+ A++TG  +GIG +      K GA V I    +  GQ   + +  E  T       
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVI----NGFGQP--EDIERERSTLESKFGV 55
Query: 69  --FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFD 125
             ++ + D++  +     +    E  G LDI+VNNAGI   AP   I E  + ++  +  
Sbjct: 56  KAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAP---IEEFPVDKWNAIIA 112
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           +N+  VFHG   A  IM  Q  G II+I S  G +  +   AY  +KH V+GL K  A E
Sbjct: 113 LNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALE 172
Query: 186 LGKYGIRVNCVSPYAVATGLALAHLP--EEERTEDAMVGFRNFVA-RNANMQGTELTAND 242
               GI  N + P  V T L    +    +++  D     R  +A +  ++Q   +T   
Sbjct: 173 NAGKGITCNAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQ--FVTPEQ 230
Query: 243 VANAVLFLASDEARYISGTNLMVDGGFTS 271
           +  A +FL+S  A  ++GT L +DGG+T+
Sbjct: 231 LGGAAVFLSSAAADQMTGTTLSLDGGWTA 259

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 120/262 (45%), Gaps = 10/262 (3%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGE--PDTFFCH 72
           L G+VA++TG  +GIG          GA + +    D    ++V   L  +      +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++K E V   VD  V + G +DI+VNNAGI       I +    +++ +  +N+  VF
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLSAVF 119
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           HG   A   M  Q  G II+I S  G +      AY  +KH V+G  K  A E    GI 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179
Query: 193 VNCVSPYAVATGLA---LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            N + P  V + L    ++ L E+   +           +  ++Q   +T   +    +F
Sbjct: 180 ANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ--FVTPEQLGGTAVF 237
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           LASD A  I+GT + VDGG+T+
Sbjct: 238 LASDAAAQITGTTVSVDGGWTA 259

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 121/258 (46%), Gaps = 10/258 (3%)
Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGGEPDTFFC 71
           + RL G++A++TG ++GIG +   LF + GAKV +     N L +   +  GG  +    
Sbjct: 3   MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAAL 62
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV  E    + V+L V +FG LD   NNAG  GA   +I    +  + +  D N+   
Sbjct: 63  AGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGA-MGEISSLSVEGWRETLDTNLTSA 121
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYG 190
           F   K+    +     G++    S  G   G  G   Y  SK  ++GL + +A ELG  G
Sbjct: 122 FLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARG 181
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVN + P    T    A+LP         V   + + R A  +       ++A A L+L
Sbjct: 182 IRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPE-------EIAEAALYL 234
Query: 251 ASDEARYISGTNLMVDGG 268
           ASD A +++G  L+ DGG
Sbjct: 235 ASDGASFVTGAALLADGG 252

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 132/270 (48%), Gaps = 30/270 (11%)
Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF 70
           P    L G+VALITG  +G GE   + F K GAKV I D      ++V   +G       
Sbjct: 2   PGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDA--ALA 59
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL---SEFEKVFDIN 127
              D++KE DV +AV+  + KFG +DI+VNNAGI   P    + A+L    EF+++  +N
Sbjct: 60  VAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKP----QNAELVEPEEFDRIVGVN 115
Query: 128 VKGVFHGMKHAARIMIPQ-----TKGTIISICSVAGAIGGLGPHA----YTGSKHAVLGL 178
           V+GV+         +IP       KG    I +VA + G   P      Y  +K  V+ +
Sbjct: 116 VRGVYLMTSK----LIPHFKENGAKGQECVILNVA-STGAGRPRPNLAWYNATKGWVVSV 170
Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            K +A EL    IRV  ++P A  T L    + E+  +E+    FR+ +       G  L
Sbjct: 171 TKALAIELAPAKIRVVALNPVAGETPLLTTFMGED--SEEIRKKFRDSIP-----MGRLL 223
Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
             +D+A A  FL S +A  I+G  L VDGG
Sbjct: 224 KPDDLAEAAAFLCSPQASMITGVALDVDGG 253

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 119/262 (45%), Gaps = 10/262 (3%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGE--PDTFFCH 72
           L G+VA++TG  +GIG          GA + +    D    ++V   L  +      +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++K E V   VD  V + G +DI+VNNAGI       I +    +++ +  +N+  VF
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLSAVF 119
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           HG   A   M  Q  G II+I S  G +      AY  +KH V+G  K  A E    GI 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179
Query: 193 VNCVSPYAVATGLA---LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            N + P  V   L    ++ L E+   +           +  ++Q   +T   +    +F
Sbjct: 180 ANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ--FVTPEQLGGTAVF 237
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           LASD A  I+GT + VDGG+T+
Sbjct: 238 LASDAAAQITGTTVSVDGGWTA 259

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 115/212 (54%), Gaps = 13/212 (6%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC 71
           A + + G VA+ITGGA+G+G +T       GA   + D+ ++ G+   + LG   +  F 
Sbjct: 4   ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN--NCVFA 61
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREAD---LSEFEKVFDIN 127
             DVT E+DV +A+ L   KFG +D+ VN AGI+  +   ++++     L +F++V D+N
Sbjct: 62  PADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVN 121
Query: 128 VKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + G F+ ++  A  M          +G II+  SVA   G +G  AY+ SK  ++G+   
Sbjct: 122 LMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 181
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
           +A +L   GIRV  ++P    T L L  LPE+
Sbjct: 182 IARDLAPIGIRVMTIAPGLFGTPL-LTSLPEK 212

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 115/212 (54%), Gaps = 13/212 (6%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC 71
           A + + G VA+ITGGA+G+G +T       GA   + D+ ++ G+   + LG   +  F 
Sbjct: 6   ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN--NCVFA 63
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREAD---LSEFEKVFDIN 127
             DVT E+DV +A+ L   KFG +D+ VN AGI+  +   ++++     L +F++V D+N
Sbjct: 64  PADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVN 123
Query: 128 VKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + G F+ ++  A  M          +G II+  SVA   G +G  AY+ SK  ++G+   
Sbjct: 124 LMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 183
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
           +A +L   GIRV  ++P    T L L  LPE+
Sbjct: 184 IARDLAPIGIRVMTIAPGLFGTPL-LTSLPEK 214

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 126/284 (44%), Gaps = 39/284 (13%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-----------------QDNLGQQ 57
           R+ G+VA +TG A G G S      + GA +   D+                  ++L + 
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67
Query: 58  VCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREA 115
                G          DV   + + +AVD  VE+ G LDI+V NAGI   G       E 
Sbjct: 68  ADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEE 127
Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG----S 171
           D +E     DIN+ GV+  +K     MI   +G  I + S   ++GGL  + +TG    +
Sbjct: 128 DWTEM---IDINLAGVWKTVKAGVPHMIAGGRGGSIILTS---SVGGLKAYPHTGHYVAA 181
Query: 172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT------GLALAHLPEEERT-EDAMVGFR 224
           KH V+GL +    ELG++ IRVN V P  V T      G      P+ E    D M    
Sbjct: 182 KHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPIC 241
Query: 225 NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
                   +    +   D++NAVLF ASDEARYI+G  L +D G
Sbjct: 242 QMF---HTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 126/233 (54%), Gaps = 20/233 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           ++ +ITG ++GIGE+  R F + G  + +      L ++V   ++L   P+T     DVT
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLL------LARRVERLKALN-LPNTLCAQVDVT 69
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            +    +A+    + +G  D +VNNAG+      D +EA+  E++++FD+NV G+ +GM+
Sbjct: 70  DKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEAN--EWQRMFDVNVLGLLNGMQ 127
Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
                M  +  GTII+I S+AG        AY G+K AV  +++NV  E+    +RV  +
Sbjct: 128 AVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTI 187
Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           +P AV T L L+H   ++  +D    +R       +M G  L A+DVA AVLF
Sbjct: 188 APSAVKTEL-LSHTTSQQ-IKDGYDAWR------VDMGGV-LAADDVARAVLF 231

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 15/257 (5%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCH 72
           +L G+V+L+TG   GIG +        G+ V I        + V + +  +         
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            ++  EE +  A +        +DI+VNNAGI+           L ++E+V  +N+ G F
Sbjct: 64  MNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKL--FLRMSLLDWEEVLKVNLTGTF 121
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +++ R MI Q  G I++I SV G  G +G   Y+ +K  ++G  K++A EL    + 
Sbjct: 122 LVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVL 181
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN V+P  + T +      E ++     +    F            +  +VAN VLFL S
Sbjct: 182 VNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFG-----------SPEEVANVVLFLCS 230
Query: 253 DEARYISGTNLMVDGGF 269
           + A YI+G  + V+GG 
Sbjct: 231 ELASYITGEVIHVNGGM 247

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 123/256 (48%), Gaps = 27/256 (10%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF-CHCD 74
            V R  L+TGG  GIG +  +     G KV            V     G P   F   CD
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVA-----------VTHRGSGAPKGLFGVECD 61
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT  + V  A     E  G ++++V+NAG+S A    +R  +  +FEKV + N+ G F  
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTE-EKFEKVINANLTGAFRV 119
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYGIRV 193
            + A+R M     G +I I SV+G+  G+G  A Y  SK  V+G+ +++A EL K  +  
Sbjct: 120 AQRASRSMQRNKFGRMIFIGSVSGSW-GIGNQANYAASKAGVIGMARSIARELSKANVTA 178
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  + T +  A    +ER +   + F    A+         T  +VA  V FLAS+
Sbjct: 179 NVVAPGYIDTDMTRAL---DERIQQGALQF--IPAKRVG------TPAEVAGVVSFLASE 227
Query: 254 EARYISGTNLMVDGGF 269
           +A YISG  + VDGG 
Sbjct: 228 DASYISGAVIPVDGGM 243

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 117/257 (45%), Gaps = 15/257 (5%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +RL G+ AL+TG A GIG++        GA V ++D+     +    S+G +        
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARA--IAA 59
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D++    V +         G +DI+VNNA I   P     + DL  + K+ D+N+ G F 
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASI--VPFVAWDDVDLDHWRKIIDVNLTGTFI 117
Query: 134 GMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +     M    K G +ISI S     G     AY  +K  V+G  + +A ELGKY I 
Sbjct: 118 VTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNIT 177
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            N V+P  + +    A  P  E           FV     M+G +     +A+ V FLAS
Sbjct: 178 ANAVTPGLIESDGVKAS-PHNEAF--------GFVEMLQAMKG-KGQPEHIADVVSFLAS 227
Query: 253 DEARYISGTNLMVDGGF 269
           D+AR+I+G  L VD G 
Sbjct: 228 DDARWITGQTLNVDAGM 244

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 119/255 (46%), Gaps = 16/255 (6%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDV 75
           R ALITG + GIG +      + G  + I   Q+    +         G P       ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
            + E   + V    E  G LD +VNNAGI+      +R  D  ++E V + N+  VF   
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLL-VRMKD-EDWEAVLEANLSAVFRTT 119
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           + A ++M+    G I++I SV G +G  G   Y  SK  ++G  + VA E  + GI VN 
Sbjct: 120 REAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNA 179
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V+P  + T +    LP+E   ++A    +   A      G      +VA AV FL S++A
Sbjct: 180 VAPGFIETEMT-ERLPQE--VKEAY--LKQIPA------GRFGRPEEVAEAVAFLVSEKA 228
Query: 256 RYISGTNLMVDGGFT 270
            YI+G  L VDGG T
Sbjct: 229 GYITGQTLCVDGGLT 243

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 134/271 (49%), Gaps = 23/271 (8%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFF 70
           R  G+  +ITG + GIG S   +F K GA+V I     D  +   QQ+ ++         
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DVT+       ++ T+ KFG +DI+VNNAG + A      +  +  ++K F +N + 
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG------SKHAVLGLNKNVAA 184
           V   M    +  + +TKG I+++ S+       GP A++G      +K A+    +  A 
Sbjct: 143 VIE-MTQKTKEHLIKTKGEIVNVSSIVA-----GPQAHSGYPYYACAKAALDQYTRCTAI 196
Query: 185 ELGKYGIRVNCVSPYAVATGLALAH-LPEEERTE-DAMVGFRNFVARNANMQGTELTAND 242
           +L ++G+RVN VSP AVATG   A  LPE    +  + +G R       +    E    +
Sbjct: 197 DLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE----E 252
Query: 243 VANAVLFLAS-DEARYISGTNLMVDGGFTSV 272
           +AN ++FLA  + + YI G +++ DGG T V
Sbjct: 253 IANIIVFLADRNLSSYIIGQSIVADGGSTLV 283

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 28/263 (10%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+V ++T  A GIG++    F + GAKV   D+ ++  Q++ +  G +        D
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVL----D 58
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           VTK++ +    D    +   LD++ N AG +      D  E D   ++   ++NV+ ++ 
Sbjct: 59  VTKKKQI----DQFANEVERLDVLFNVAGFVHHGTVLDCEEKD---WDFSMNLNVRSMYL 111
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGIR 192
            +K     M+ Q  G II++ SVA ++ G+     Y+ +K AV+GL K+VAA+  + GIR
Sbjct: 112 MIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR 171
Query: 193 VNCVSPYAVATGLALAHL-----PEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
            NCV P  V T      +     PEE R +        F+ R     G   TA ++A   
Sbjct: 172 CNCVCPGTVDTPSLQERIQARGNPEEARND--------FLKRQKT--GRFATAEEIAMLC 221
Query: 248 LFLASDEARYISGTNLMVDGGFT 270
           ++LASDE+ Y++G  +++DGG++
Sbjct: 222 VYLASDESAYVTGNPVIIDGGWS 244

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 126/260 (48%), Gaps = 15/260 (5%)
Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
           V RL G  A +TG  +GIG    R F   GA++ + D +     +  Q LG         
Sbjct: 6   VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIV- 64
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT + +  +A     E    + I+VN+AGI  A   D  E D + + +V  +NV G+F
Sbjct: 65  ADVT-DAEAMTAAAAEAEAVAPVSILVNSAGI--ARLHDALETDDATWRQVMAVNVDGMF 121
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA--YTGSKHAVLGLNKNVAAELGKYG 190
              +   R M+ +  G I+++ S++G I      A  Y  SK AV  L + +AAE    G
Sbjct: 122 WASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRG 181
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           +RVN ++P  VAT + L      ER E     F  ++  +    G     +++A A LFL
Sbjct: 182 VRVNALAPGYVATEMTLKM---RERPEL----FETWL--DMTPMGRCGEPSEIAAAALFL 232
Query: 251 ASDEARYISGTNLMVDGGFT 270
           AS  A Y++G  L VDGG+T
Sbjct: 233 ASPAASYVTGAILAVDGGYT 252

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 128/270 (47%), Gaps = 27/270 (10%)
Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS 61
           S+  +T +  A    V R  L+TGG  GIG +  +     G KV            V   
Sbjct: 19  SHMTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVA-----------VTHR 67
Query: 62  LGGEPDTFF-CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
             G P   F    DVT  + V  A     E  G ++++V+NAG+S A    +R  +  +F
Sbjct: 68  GSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTE-EKF 125
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLN 179
           EKV + N+ G F   + A+R M     G +I I SV+G + G+G  A Y  SK  V+G+ 
Sbjct: 126 EKVINANLTGAFRVAQRASRSMQRNKFGRMIFIASVSG-LWGIGNQANYAASKAGVIGMA 184
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           +++A EL K  +  N V+P  + T +  A    +ER +   + F    A+         T
Sbjct: 185 RSIARELSKANVTANVVAPGYIDTDMTRAL---DERIQQGALQF--IPAKRVG------T 233
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGF 269
             +VA  V FLAS++A YISG  + VDGG 
Sbjct: 234 PAEVAGVVSFLASEDASYISGAVIPVDGGM 263

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 118/258 (45%), Gaps = 20/258 (7%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCHC 73
           L  R  L+TGG  GIG     +F + GA V +A         V   LG  G  +      
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS--EFEKVFDINVKGV 131
           DV+       A    V+ FG LD++  NAGI     P+ R   ++  +  +V D+NVKG 
Sbjct: 99  DVSDPGSCADAARTVVDAFGALDVVCANAGI----FPEARLDTMTPEQLSEVLDVNVKGT 154
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYG 190
            + ++     +    +G +I   S+ G + G  G   Y  SK A LG  +  A EL   G
Sbjct: 155 VYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRG 214
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           + VN + P  + T   L  + EE         + + +AR+  M G   +  D+ +   FL
Sbjct: 215 VTVNAILPGNILT-EGLVDMGEE---------YISGMARSIPM-GMLGSPVDIGHLAAFL 263
Query: 251 ASDEARYISGTNLMVDGG 268
           A+DEA YI+G  ++VDGG
Sbjct: 264 ATDEAGYITGQAIVVDGG 281

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 14/259 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCD 74
           L GR AL+TG + G+G +        GA++ I     +   Q  Q       D      D
Sbjct: 24  LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFD 83
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFH 133
           VT E ++  A     E+   +DI+VNNAGI    P  ++  AD   +++V D N+   F 
Sbjct: 84  VTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETAD---WQRVIDTNLTSAFM 140
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + AA+ MIP+  G I++I S+   +       YT +K  +  L + +AAE  +YGI+ 
Sbjct: 141 IGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQA 200
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N + P  + T +  A +   E   DA V  R    R    Q       ++    +FL++ 
Sbjct: 201 NAIGPGYMLTDMNQALIDNPEF--DAWVKARTPAKRWGKPQ-------ELVGTAVFLSAS 251
Query: 254 EARYISGTNLMVDGGFTSV 272
            + Y++G  + VDGG  SV
Sbjct: 252 ASDYVNGQIIYVDGGMLSV 270

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 24/260 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCH 72
           L GR A++TG  +GIG +    + + GA V      D + ++V   +   GG  +     
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGGGSAEAV--- 84
Query: 73  CDVTKEEDVCSAVDLTVEKFGT--LDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVK 129
             V    D+  A ++  E   T  +D++VNNAGI + AP  ++    L  + +V  +N+ 
Sbjct: 85  --VADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEV---SLGRWREVLTVNLD 139
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             +   +     M+    G I++I S+    GG    AY  SKHAV+GL + +A+E    
Sbjct: 140 AAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGR 199
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+ VN ++P  V T    A   ++ER  +         AR     G   T  D+    +F
Sbjct: 200 GVGVNALAPGYVVTANTAALRADDERAAE-------ITARIP--AGRWATPEDMVGPAVF 250
Query: 250 LASDEARYISGTNLMVDGGF 269
           LASD A Y+ G  L VDGG+
Sbjct: 251 LASDAASYVHGQVLAVDGGW 270

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 122/257 (47%), Gaps = 33/257 (12%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC--HCDV 75
           G+  L+TGG++GIG +    F + GA+V               +LG + D      H  +
Sbjct: 11  GQQVLVTGGSSGIGAAIAMQFAELGAEVV--------------ALGLDADGVHAPRHPRI 56
Query: 76  TKEE-DVCSAVDLT--VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            +EE D+  +  L    E    LD++VNNAGIS     D  E DL+ FE+V  +N+    
Sbjct: 57  RREELDITDSQRLQRLFEALPRLDVLVNNAGIS----RDREEYDLATFERVLRLNLSAAM 112
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
                 AR ++ Q  G+I++I S+    G     AY+ SK A++ L +++A E     IR
Sbjct: 113 LA-SQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIR 171
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN ++P  + T L      + E T   M   R  +AR          A +VA+A  FL  
Sbjct: 172 VNAIAPGWIDTPLGAGLKADVEATRRIMQ--RTPLARWGE-------APEVASAAAFLCG 222
Query: 253 DEARYISGTNLMVDGGF 269
             A +++G  L VDGG+
Sbjct: 223 PGASFVTGAVLAVDGGY 239

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 131/273 (47%), Gaps = 33/273 (12%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFF 70
           R   +  +ITG + GIG +T  LF + GA V I    ++  +   Q + +S   E     
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI-----READLSEFEKVFD 125
              DVT E+     ++ T+++FG +D++VNNAG   A  PD       +  +  + K   
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAG---AAIPDAFGTTGTDQGIDIYHKTLK 119
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA------YTGSKHAVLGLN 179
           +N++ V   M    +  +  +KG I+++ S+       GP A      Y  +K A+    
Sbjct: 120 LNLQAVIE-MTKKVKPHLVASKGEIVNVSSIVA-----GPQAQPDFLYYAIAKAALDQYT 173
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAH-LPEEERTEDAMVGFRNFVARNAN--MQGT 236
           ++ A +L K+GIRVN VSP  V TG   A  +P++   +     F NF+A +      G 
Sbjct: 174 RSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQK-----FYNFMASHKECIPIGA 228
Query: 237 ELTANDVANAVLFLAS-DEARYISGTNLMVDGG 268
                 +AN +LFLA  + + YI G +++ DGG
Sbjct: 229 AGKPEHIANIILFLADRNLSFYILGQSIVADGG 261

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 121/284 (42%), Gaps = 44/284 (15%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV--------------QDNLGQQVCQ 60
           +L GRVA ITG A G G +        GA +   D+               D+L + V  
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRL 67
Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
                        D    + +   VD  V   G LDI+V NAG++     D  +    +F
Sbjct: 68  VEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWD--DITPEDF 125
Query: 121 EKVFDINVKGVFHG-MKHAARIMIPQTKGTIISICSVAGAIGGLGPHA--YTGSKHAVLG 177
             V DINV G ++  M  A RI+     G+II I S AG    + P    YT SKHAV G
Sbjct: 126 RDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM--KMQPFMIHYTASKHAVTG 183
Query: 178 LNKNVAAELGKYGIRVNCVSPYAV-----------ATGLALAHLPEEERTEDAMVGFRNF 226
           L +  AAELGK+ IRVN V P  V           A G A+   P+            ++
Sbjct: 184 LARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF--LPDW 241
Query: 227 VARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           VA             D+A+ V +LASDE+R ++   + VD G T
Sbjct: 242 VAE----------PEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 128/272 (47%), Gaps = 24/272 (8%)
Query: 9   SSPAVQR---LVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGG 64
           +S  V+R   L  +VAL+T    GIG +  R   + GA V ++   Q+N+ + V    G 
Sbjct: 2   ASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE 61
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP---DIREADLSEFE 121
                   C V K ED    V + V   G +DI+V+NA ++    P   +I +A    ++
Sbjct: 62  GLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVN----PFFGNIIDATEEVWD 117
Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLN 179
           K+  +NVK      K     M  +  G+++ + SV        LGP  Y  SK A+LGL 
Sbjct: 118 KILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP--YNVSKTALLGLT 175
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           KN+A EL    IRVNC++P  + T  +     ++ R E      R  + R  N +     
Sbjct: 176 KNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLR--IRRLGNPE----- 228
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
             D A  V FL S++A YI+G  ++V GG  S
Sbjct: 229 --DCAGIVSFLCSEDASYITGETVVVGGGTAS 258

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 124/275 (45%), Gaps = 21/275 (7%)
Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVC 59
           M++S  T   P    L  +VAL+T    GIG +  R   + GA V ++   Q N+ Q V 
Sbjct: 2   MASSGMTRRDP----LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVA 57
Query: 60  QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP---DIREAD 116
              G         C V K ED    V   V+  G +DI+V+NA ++    P    I +  
Sbjct: 58  TLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVN----PFFGSIMDVT 113
Query: 117 LSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL 176
              ++K  DINVK      K     M  +  G+++ + S+A      G   Y  SK A+L
Sbjct: 114 EEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALL 173
Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT 236
           GL K +A EL    IRVNC++P  + T  +     ++E+ E      R  + R    +  
Sbjct: 174 GLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLR--IRRLGEPE-- 229
Query: 237 ELTANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
                D A  V FL S++A YI+G  ++V GG  S
Sbjct: 230 -----DCAGIVSFLCSEDASYITGETVVVGGGTPS 259

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 122/256 (47%), Gaps = 27/256 (10%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF-CHCD 74
            V R  L+TGG  GIG +  +     G KV            V     G P   F    D
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVA-----------VTHRGSGAPKGLFGVEVD 61
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT  + V  A     E  G ++++V+NAG+S A    +R  +  +FEKV + N+ G F  
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTE-EKFEKVINANLTGAFRV 119
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYGIRV 193
            + A+R M     G +I I SV+G + G+G  A Y  SK  V+G+ +++A EL K  +  
Sbjct: 120 AQRASRSMQRNKFGRMIFIGSVSG-LWGIGNQANYAASKAGVIGMARSIARELSKANVTA 178
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  + T +  A    +ER +   + F    A+         T  +VA  V FLAS+
Sbjct: 179 NVVAPGYIDTDMTRAL---DERIQQGALQF--IPAKRVG------TPAEVAGVVSFLASE 227
Query: 254 EARYISGTNLMVDGGF 269
           +A YISG  + VDGG 
Sbjct: 228 DASYISGAVIPVDGGM 243

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 15/260 (5%)
Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF 70
           P   R   +V ++TG   GIG++      + GA V +AD+     + V + +  +  T  
Sbjct: 2   PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAI 61
Query: 71  -CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD-IREADLSEFEKVFDINV 128
               DV+  E   +  D T+ +FG +D +VNNA I G    D +   D   ++K   +N+
Sbjct: 62  SVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNL 121
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            G     +   + M  +  G I++  S A     L  + Y  +K  + GL + ++ ELG 
Sbjct: 122 DGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQQLSRELGG 178
Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
             IR+N ++P  + T       P +E  +D + G    ++R         T +D+    L
Sbjct: 179 RNIRINAIAPGPIDTEANRTTTP-KEMVDDIVKGLP--LSRMG-------TPDDLVGMCL 228
Query: 249 FLASDEARYISGTNLMVDGG 268
           FL SDEA +I+G    VDGG
Sbjct: 229 FLLSDEASWITGQIFNVDGG 248

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 94.0 bits (232), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 114/256 (44%), Gaps = 15/256 (5%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +RL G+ AL+TG A GIG++        GA V ++D+     +    S+G +        
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARA--IAA 59
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D++    V +         G +DI+VNNA I   P     + DL  + K+ D+N+ G F 
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASI--VPFVAWDDVDLDHWRKIIDVNLTGTFI 117
Query: 134 GMKHAA-RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +    +       G +ISI S     G     AY  +K  V+G  + +A ELGKY I 
Sbjct: 118 VTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNIT 177
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            N V+P  + +    A  P  E       GF   +         E     +A+ V FLAS
Sbjct: 178 ANAVTPGLIESDGVKAS-PHNE-----AFGFVEXLQAXKGKGQPE----HIADVVSFLAS 227
Query: 253 DEARYISGTNLMVDGG 268
           D+AR+I+G  L VD G
Sbjct: 228 DDARWITGQTLNVDAG 243

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 24/266 (9%)
Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGG 64
           S A+Q   G+  LITG + GIG    +     G KV I     A+V D L  ++ +    
Sbjct: 22  SNAMQ-FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--- 77
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF 124
                    D   E D   A+   V+  G L  +VNNAG+         + +  +F  V 
Sbjct: 78  GYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTE--DFHHVI 135
Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           D N+   F G + A ++M     G+++++ S+ G  G +G   Y+ SK  ++ ++K+ A 
Sbjct: 136 DNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAY 195
Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDV 243
           E     IR N V+P  + T +  A+L +E + +        +V    N+    L +A +V
Sbjct: 196 EGALRNIRFNSVTPGFIETDMN-ANLKDELKAD--------YVK---NIPLNRLGSAKEV 243
Query: 244 ANAVLFLASDEARYISGTNLMVDGGF 269
           A AV FL SD + YI+G  L V+GG 
Sbjct: 244 AEAVAFLLSDHSSYITGETLKVNGGL 269

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 18/258 (6%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+  L+TG A+GIG + + LF + GA +   D ++ L  +   +L  E        D
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVV--AD 60
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+  + V +     +E+FG L  + + AG++ +         L  +EKV  +N+ G F  
Sbjct: 61  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALS--WNLPLEAWEKVLRVNLTGSFLV 118
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            + A  ++  +  G+++   SVAG +G  G   Y   K  V+GL + +A EL + G+RVN
Sbjct: 119 ARKAGEVL--EEGGSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVRVN 175
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            + P  + T +  A LP     ++            A+  G      +VA A LFL S+E
Sbjct: 176 VLLPGLIQTPMT-AGLPPWAWEQEV----------GASPLGRAGRPEEVAQAALFLLSEE 224
Query: 255 ARYISGTNLMVDGGFTSV 272
           + YI+G  L VDGG + V
Sbjct: 225 SAYITGQALYVDGGRSIV 242

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 12/254 (4%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L  +VA+ITG   GIG  T R+  + GA+V +AD+ +        S+G          D+
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGR--GAVHHVVDL 66
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T E  V + +D T++ FG LDI+ NNA  S      + +  +  ++  F +N +G     
Sbjct: 67  TNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMC 126
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K+A   +I    G I++I S           AY  +K A+  L + VA + G++G+R N 
Sbjct: 127 KYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNA 186
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           ++P  V T      LP+            +  A + ++ G     +++A  V FLASD A
Sbjct: 187 IAPGLVRTPRLEVGLPQP---------IVDIFATH-HLAGRIGEPHEIAELVCFLASDRA 236
Query: 256 RYISGTNLMVDGGF 269
            +I+G  +  D G 
Sbjct: 237 AFITGQVIAADSGL 250

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL------GQQVCQSL-------GG 64
           GRV ++TG   GIG +    F   GA+V + D+   L      G    QS+       GG
Sbjct: 27  GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG 86
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEK 122
           E        +V   +     +   VE FG LD++VNNAGI      D   A+ SE  F+ 
Sbjct: 87  E--AVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI----VRDRMIANTSEEEFDA 140
Query: 123 VFDINVKGVFHGMKHAARIMIPQTK------GTIISICSVAGAIGGLGPHAYTGSKHAVL 176
           V  +++KG F  M+HAA      +K      G II+  S AG  G +G   Y+ +K  + 
Sbjct: 141 VIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIA 200
Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT 236
            L    AAE+G+YG+ VN ++P A  T +      E   T+D     ++F A        
Sbjct: 201 TLTLVGAAEMGRYGVTVNAIAPSA-RTRMTETVFAEMMATQD-----QDFDA-------- 246
Query: 237 ELTANDVANAVLFLASDEARYISGTNLMVDGG 268
            +   +V+  V++L S EAR ++G    V+GG
Sbjct: 247 -MAPENVSPLVVWLGSAEARDVTGKVFEVEGG 277

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 119/271 (43%), Gaps = 25/271 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD-------- 67
           L GRVA ITG A G G S        GA +   D+   +   V  +     D        
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 68  ------TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFE 121
                       DV  +  +   V   +E+FG LD++V NAG+       + E    +++
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLS--WGRVWELTDEQWD 130
Query: 122 KVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
            V  +N+ G +  ++     MI     G+I+ + S AG     G   Y+ SKH +  L  
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190
Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--- 237
            +A ELG+YGIRVN + PY+V T +      E E   +      +FV     M       
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPMI-----EPEAMMEIFARHPSFVHSFPPMPVQPNGF 245
Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGG 268
           +TA++VA+ V +LA D +  ++GT + VD G
Sbjct: 246 MTADEVADVVAWLAGDGSGTLTGTQIPVDKG 276

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 21/258 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           L GR  L+TG   GIG  TV+  H  GA+V  ++  Q +L   V +  G EP    C  D
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP---VC-VD 60
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +   E    A +  +   G +D++VNNA +  A      E     F++ F++N++ V   
Sbjct: 61  LGDWE----ATERALGSVGPVDLLVNNAAV--ALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            +  AR +I +   G I+++ S            Y  +K A+  L K +A ELG + IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  V T +  A   +  + +  +         N    G       V NA+LFL SD
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTML---------NRIPLGKFAEVEHVVNAILFLLSD 225
Query: 254 EARYISGTNLMVDGGFTS 271
            +   +G+ L V+GGF +
Sbjct: 226 RSGMTTGSTLPVEGGFWA 243

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 21/258 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           L GR  L+TG   GIG  TV+  H  GA+V  ++  Q +L   V +  G EP    C  D
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP---VC-VD 60
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +   E    A +  +   G +D++VNNA +  A      E     F++ F++N++ V   
Sbjct: 61  LGDWE----ATERALGSVGPVDLLVNNAAV--ALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            +  AR +I +   G I+++ S            Y  +K A+  L K +A ELG + IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  V T +  A   +  + +  +         N    G       V NA+LFL SD
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTML---------NRIPLGKFAEVEHVVNAILFLLSD 225
Query: 254 EARYISGTNLMVDGGFTS 271
            +   +G+ L V+GGF +
Sbjct: 226 RSGMTTGSTLPVEGGFWA 243

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 27/267 (10%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----EPDTFF 70
           RL   +AL+TG  +GIG +        GA V   D+     Q+  + LGG    E     
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTL-----DIMVNNAGISGAPCPDIREADLSE--FEKV 123
            H     +     A    +E+          ++V+ AGI+     D     +SE  ++KV
Sbjct: 64  NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT----QDEFLLHMSEDDWDKV 119
Query: 124 FDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
             +N+KG F   + AA+ ++    +G+II+I S+ G +G +G   Y  SK  V+GL +  
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTA 179
Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
           A ELG++GIR N V P  +AT       P  ++    +V     +    ++   E    D
Sbjct: 180 ARELGRHGIRCNSVLPGFIAT-------PMTQKVPQKVVDKITEMIPMGHLGDPE----D 228
Query: 243 VANAVLFLASDEARYISGTNLMVDGGF 269
           VA+ V FLAS+++ YI+GT++ V GG 
Sbjct: 229 VADVVAFLASEDSGYITGTSVEVTGGL 255

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 115/256 (44%), Gaps = 25/256 (9%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           G  AL+TG   GIG  TV+  H  GAKV  +     +L     +  G EP        V 
Sbjct: 7   GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEP--------VC 58
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            +     A +  +   G +D++VNNA +         E     F++ F +N++ VF   +
Sbjct: 59  VDLGDWDATEKALGGIGPVDLLVNNAAL--VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ 116
Query: 137 HAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
             AR MI +   G+I+++ S+   +       Y+ +K A+  L K +A ELG + IRVN 
Sbjct: 117 MVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNS 176
Query: 196 VSPYAVAT--GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           V+P  V T  G  ++  PE  R        R F               DV N++LFL SD
Sbjct: 177 VNPTVVLTDMGKKVSADPEFARKLKERHPLRKFA-----------EVEDVVNSILFLLSD 225
Query: 254 EARYISGTNLMVDGGF 269
            +   SG  ++VD G+
Sbjct: 226 RSASTSGGGILVDAGY 241

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 21/265 (7%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI---ADVQDNLGQQVCQSLGGEPDTFFCH 72
           L G+ AL+TG  +GIG    ++  + GA + +    D    L +     +          
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGV----KAVHHP 57
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGV 131
            D++    + +   L   +FG +DI+VNNAGI   AP   + +  L  ++K+  +N+  V
Sbjct: 58  ADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAP---VEQFPLESWDKIIALNLSAV 114
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           FHG + A   M  +  G II+I SV G +G  G  AY  +KH V+GL K V  E     +
Sbjct: 115 FHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNV 174
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE-----LTANDVANA 246
             N + P     G  L  L +++  + A  G     A++  +   +     +T   +   
Sbjct: 175 TCNAICP-----GWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGEL 229
Query: 247 VLFLASDEARYISGTNLMVDGGFTS 271
           VLFL S+    + G    VDGG+ +
Sbjct: 230 VLFLCSEAGSQVRGAAWNVDGGWLA 254

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 124/255 (48%), Gaps = 14/255 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCD 74
           L G+VAL+TG + GIG++      + GA V       +  +++ ++L     +      D
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLD 84
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+ +E V + ++   +  G   I+VNNAGI+      +R  D  E+  V + N+  ++  
Sbjct: 85  VSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLL-VRMKD-DEWFDVVNTNLNSLYRL 142
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K   R M     G II+I SV GA+G  G   Y  +K  + G  + +A E+G   I VN
Sbjct: 143 SKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVN 202
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V+P  + T +    LPE +R  +A++G            G    A ++A  V FLASD 
Sbjct: 203 AVAPGFIDTDMT-RELPEAQR--EALLGQIPL--------GRLGQAEEIAKVVGFLASDG 251
Query: 255 ARYISGTNLMVDGGF 269
           A Y++G  + V+GG 
Sbjct: 252 AAYVTGATVPVNGGM 266

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 16/254 (6%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+ A++ GG  G G +TVR   + GA+V +    ++   ++ +  G  P       D+  
Sbjct: 8   GKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFG--PRVHALRSDIAD 65
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGMK 136
             ++        +  G +D++  NAG+S   P   + EA    +++ F +N KG F  ++
Sbjct: 66  LNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEAS---YDRQFAVNTKGAFFTVQ 122
Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
               ++  +  G+I+   SVA   G  G   Y+ SK A++     +AAEL   GIRVN V
Sbjct: 123 RLTPLI--REGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSV 180
Query: 197 SPYAVATGL-ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           SP  + T    +A + E ER E   +G  N      N      TA++VA AVLFLA  EA
Sbjct: 181 SPGFIDTPTKGVAGITEAERAEFKTLG-DNITPXKRNG-----TADEVARAVLFLAF-EA 233
Query: 256 RYISGTNLMVDGGF 269
            + +G  L VDGG 
Sbjct: 234 TFTTGAKLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 16/254 (6%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+ A++ GG  G G +TVR   + GA+V +    ++   ++ +  G  P       D+  
Sbjct: 7   GKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFG--PRVHALRSDIAD 64
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGMK 136
             ++        +  G +D++  NAG+S   P   + EA    +++ F +N KG F  ++
Sbjct: 65  LNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEAS---YDRQFAVNTKGAFFTVQ 121
Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
               ++  +  G+I+   SVA   G  G   Y+ SK A++     +AAEL   GIRVN V
Sbjct: 122 RLTPLI--REGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSV 179
Query: 197 SPYAVATGL-ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           SP  + T    +A + E ER E   +G  N      N      TA++VA AVLFLA  EA
Sbjct: 180 SPGFIDTPTKGVAGITEAERAEFKTLG-DNITPXKRNG-----TADEVARAVLFLAF-EA 232
Query: 256 RYISGTNLMVDGGF 269
            + +G  L VDGG 
Sbjct: 233 TFTTGAKLAVDGGL 246

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 111/246 (45%), Gaps = 21/246 (8%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPD-TFFCHCD 74
           G+VAL+TG A GIG +        GAKV + D     G Q   +L    EP  T F  CD
Sbjct: 7   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 66
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V  ++ +       V+ FG LDI+VNNAG++              +EK   IN+  V  G
Sbjct: 67  VADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE----------KNWEKTLQINLVSVISG 116
Query: 135 MKHAARIMIPQT---KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN--VAAELGKY 189
                  M  Q     G II++ S+AG +       Y  SKH ++G  ++  +AA L   
Sbjct: 117 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNS 176
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+R+N + P  V T  A+    E+E      + +++ +       G  L    +AN ++ 
Sbjct: 177 GVRLNAICPGFVNT--AILESIEKEENMGQYIEYKDHIKDMIKYYGI-LDPPLIANGLIT 233
Query: 250 LASDEA 255
           L  D+A
Sbjct: 234 LIEDDA 239

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 121/266 (45%), Gaps = 40/266 (15%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           L GR AL+TG  TG+G++        GA+V C A    +    +    GG          
Sbjct: 7   LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDF- 65
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF-----EKVFDINVK 129
                D  +A D   +     DI+VNNAGI       IR AD  EF     ++V D+N+K
Sbjct: 66  ----ADPLAAKDSFTD--AGFDILVNNAGI-------IRRADSVEFSELDWDEVMDVNLK 112
Query: 130 GVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            +F   +  A+ ++ + + G +++I S+    GG+   +YT +KH V GL K +A E   
Sbjct: 113 ALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAA 172
Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-----QGTELTANDV 243
            GI VN ++P  +          E   TE      R   ARN  +      G    + D+
Sbjct: 173 KGINVNAIAPGYI----------ETNNTE----ALRADAARNKAILERIPAGRWGHSEDI 218
Query: 244 ANAVLFLASDEARYISGTNLMVDGGF 269
           A A +FL+S  A Y+ G  L VDGG+
Sbjct: 219 AGAAVFLSSAAADYVHGAILNVDGGW 244

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +L G VALITGGA+G+G + V  F   GA+V + D      +++  + GG  +      D
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGG--NAVGVVGD 59
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADL-SEFEKVFDINVKGV 131
           V   +D   A +  +  FG +D ++ NAGI        D+ E  + + F+ +F +NVKG 
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            H +K     ++  ++G+++   S AG     G   YT +KHAV+GL + +A EL  + +
Sbjct: 120 IHAVKACLPALV-SSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-V 177
Query: 192 RVNCVSPYAVATGL 205
           RVN V+P  + T L
Sbjct: 178 RVNGVAPGGMNTDL 191

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI---ADVQDNLGQQVCQSLGGEPDTFFCH 72
           L G+VA +TG + GIG +    + + GA V I   +   D   + + ++ G     +   
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAY--K 89
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           C+++  + V   +    + FGT+D+ V NAG++    P+I   +   + K+  +++ GV+
Sbjct: 90  CNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVY 149
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH---AYTGSKHAVLGLNKNVAAELGKY 189
           +   +  +I     KG++I   S++G I  + P     Y  +K A   L K++A E   +
Sbjct: 150 YCSHNIGKIFKKNGKGSLIITSSISGKIVNI-PQLQAPYNTAKAACTHLAKSLAIEWAPF 208
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT-------AND 242
             RVN +SP  + T +                   +F +++   +  +LT         +
Sbjct: 209 A-RVNTISPGYIDTDIT------------------DFASKDMKAKWWQLTPLGREGLTQE 249
Query: 243 VANAVLFLASDEARYISGTNLMVDGGFT 270
           +    L+LAS+ + + +G+++++DGG+T
Sbjct: 250 LVGGYLYLASNASTFTTGSDVVIDGGYT 277

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 25/265 (9%)
Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
           +++  G  A+++GGA G+GE+TVR  H  G  V IAD+    G+ +   LG   +  F  
Sbjct: 25  IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAE--FVS 82
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIRE----ADLSEFEKVFDINV 128
            +VT E+ V +A++    + G L   V   G  G     ++     AD+  F K  D+ +
Sbjct: 83  TNVTSEDSVLAAIE-AANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYL 141
Query: 129 KGVFHGMKH-AARIMIPQT-----KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
            G ++  +  AA I   +      +G ++   S+AG  G +G  AY  +K  V+GL    
Sbjct: 142 NGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAA 201
Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
           A +L   GIRVN ++P  + T +       E   E+A+  F    A N        T ++
Sbjct: 202 ARDLSSAGIRVNTIAPGTMKTPIM------ESVGEEALAKF----AANIPFPKRLGTPDE 251
Query: 243 VANAVLFLASDEARYISGTNLMVDG 267
            A+A  FL ++   YI+G  + +DG
Sbjct: 252 FADAAAFLLTNG--YINGEVMRLDG 274

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 122/276 (44%), Gaps = 29/276 (10%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIAD-------------VQDNLGQQVCQSLGG 64
           G+ ALITGGA G+G S      + GA + I D               D+L + V      
Sbjct: 10  GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT 69
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKV 123
                    DV     + S V    +  G +DI + NAGIS  A  P++  A   ++++V
Sbjct: 70  GRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESA---QWDEV 126
Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
              N+ G F+ +   A  MI +  G I+++ S+ G        +Y  SK  V+GL K  A
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAA 186
Query: 184 AELGKYGIRVNCVSPYAVATGLALAHL------PEEERT--EDAMVGFRNFVARNANMQG 235
            +L  YGI VN V+P  + T +           P+ E+   +D    F +   + A    
Sbjct: 187 HDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF-- 244
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
             L   +V  AVLFL  + + +I+GT L +D G T+
Sbjct: 245 --LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 25/259 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----QSLGGEPDTFFC 71
           L G+ A +TGG+ GIG +  +     GA V +  V      Q      +  GG       
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGR--AVAI 86
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKG 130
             D    E +  A+  TVE  G LDI+VN+AGI   AP   + E  +++F++V  +N + 
Sbjct: 87  RADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP---LEETTVADFDEVXAVNFRA 143
Query: 131 VFHGMKHAARIMIPQTKGTIISICS-VAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            F  ++ A+R +     G II+I S +A  +   G   Y+ SK A+ GL K +A +LG  
Sbjct: 144 PFVAIRSASRHL--GDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPR 201
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GI VN V P +  T    A     E   + +              G+     D+A  V +
Sbjct: 202 GITVNIVHPGSTDTDXNPADGDHAEAQRERIA------------TGSYGEPQDIAGLVAW 249
Query: 250 LASDEARYISGTNLMVDGG 268
           LA  + ++++G +L +DGG
Sbjct: 250 LAGPQGKFVTGASLTIDGG 268

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 126/269 (46%), Gaps = 33/269 (12%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDT 68
           Q  + +V LITGG+ GIG ++  L  + G  V +     +   D + +Q+ ++ GG+   
Sbjct: 21  QSXLSKVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREA-GGQ--A 77
Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                DV KE +V +  +    + G L  +VNNAG+       +    L   ++ F+INV
Sbjct: 78  LAVQADVAKEREVLAXFETVDAQLGRLSALVNNAGVVD-QTTRVDGITLERLQRXFEINV 136
Query: 129 KGVFHGMKHAARIMIPQ---TKGTIISICSVAGAIGGLGPHA-YTGSKHAV----LGLNK 180
            G F   + A +    +   + G+I+++ S A  +G  G +  Y  +K A+    LGL K
Sbjct: 137 FGSFLCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAK 196
Query: 181 NVAAELGKYGIRVNCVSPYAVATGL-ALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
            VA E    GIRVN V P  + T + A   LP   R           VA     Q    T
Sbjct: 197 EVATE----GIRVNAVRPGIIETDIHASGGLPNRARD----------VAPQVPXQRAG-T 241
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
           A +VA A+++L  D+A Y +G  L V GG
Sbjct: 242 AREVAEAIVWLLGDQASYTTGALLDVTGG 270

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 18/263 (6%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           QRL  ++A+ITG  +GIG +  + F   GA+V I   + ++       +GG         
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGG------GAV 78
Query: 74  DVTKEEDVCSAVDLTVEKF----GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
            +  +    + +D   EK     G +D++  NAG  G+  P + E    +++  FD NVK
Sbjct: 79  GIQADSANLAELDRLYEKVKAEAGRIDVLFVNAG-GGSXLP-LGEVTEEQYDDTFDRNVK 136
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           GV   ++ A  ++   +  +++   S AG+ G      Y  SK A+    +N   +L   
Sbjct: 137 GVLFTVQKALPLLARGS--SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDR 194
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIR+N +SP    T   L  L  ++  +    G  N +A      G    A +VA A LF
Sbjct: 195 GIRINTLSPGPTET-TGLVELAGKDPVQQQ--GLLNALAAQVPX-GRVGRAEEVAAAALF 250
Query: 250 LASDEARYISGTNLMVDGGFTSV 272
           LASD++ +++G  L VDGG   V
Sbjct: 251 LASDDSSFVTGAELFVDGGSAQV 273

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 30/256 (11%)
Query: 16  LVGRVALITGGA-TGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQ--SLG-GEPDTFF 70
           L G+V L+T  A TGIG +T R     GA V I+D  +  LG+   Q   LG G  +   
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVK 129
           C  DVT  E V + +  TVEK G LD++VNNAG+ G  P  D+ +    E+++V ++ + 
Sbjct: 80  C--DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTD---EEWDRVLNVTLT 134
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA---YTGSKHAVLGLNKNVAAEL 186
            V    + A R       G +  I + A  +G    H+   Y  +K  V+ L +  A E 
Sbjct: 135 SVMRATRAALRYFRGVDHGGV--IVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEA 192
Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVA 244
            ++G+R+N VSP       ++A     E+T  +       + R A+ +  G      +VA
Sbjct: 193 VEFGVRINAVSP-------SIARHKFLEKTSSS-----ELLDRLASDEAFGRAAEPWEVA 240
Query: 245 NAVLFLASDEARYISG 260
             + FLASD + Y++G
Sbjct: 241 ATIAFLASDYSSYMTG 256

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 114/253 (45%), Gaps = 18/253 (7%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           +VAL+TG + GIG          GA V          ++   S   +   F     V   
Sbjct: 6   KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSX--KEKGFKARGLVLNI 63
Query: 79  EDVCSAVDLTVEKFG---TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
            D+ S  +   E       +DI+VNNAGI+          D  E++ V + N+  +F   
Sbjct: 64  SDIESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSED--EWQSVINTNLSSIFRXS 121
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R    +  G IISI SV G+ G  G   Y  +K  V+G +K++A E+    I VN 
Sbjct: 122 KECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNV 181
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V+P  +AT      L +E+++         F+A      G      D+A AV FLAS+EA
Sbjct: 182 VAPGFIATD-XTDKLTDEQKS---------FIATKI-PSGQIGEPKDIAAAVAFLASEEA 230
Query: 256 RYISGTNLMVDGG 268
           +YI+G  L V+GG
Sbjct: 231 KYITGQTLHVNGG 243

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 21/256 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV-----CQSLGGEPDTFFCHC 73
           R+A +TGG  GIG S  +  HK G +V +A    N  ++V      ++LG   D +    
Sbjct: 14  RIAYVTGGMGGIGTSICQRLHKDGFRV-VAGCGPNSPRRVKWLEDQKALG--FDFYASEG 70
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           +V   +    A D    + G +D++VNNAGI+       R+    +++ V D N+  +F+
Sbjct: 71  NVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVV--FRKMTREDWQAVIDTNLTSLFN 128
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             K     M+ +  G II+I SV G  G  G   Y+ +K  + G   ++A E+   G+ V
Sbjct: 129 VTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTV 188
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N VSP  + T +  A  P+      A +  R              + +++ + V +LAS+
Sbjct: 189 NTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRL-----------GSPDEIGSIVAWLASE 237
Query: 254 EARYISGTNLMVDGGF 269
           E+ + +G +  ++GG 
Sbjct: 238 ESGFSTGADFSLNGGL 253

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD----NLGQQVCQSLGGEPDTF 69
           ++L G+  LITGG +GIG +    F K GA + IA + +    N  +Q  +  G +    
Sbjct: 43  EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK--CV 100
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               D++ E+     V  TV + G+L+I+VNN      P   +      + EK F IN+ 
Sbjct: 101 LLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVA-QQYPQQGLEYITAEQLEKTFRINIF 159
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             FH  K A   +  +    II+  S+    G      Y+ +K A++   ++++  L + 
Sbjct: 160 SYFHVTKAALSHL--KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQK 217
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRVN V+P  + T L  +   E++ ++     F + V      Q  EL     A A ++
Sbjct: 218 GIRVNGVAPGPIWTPLIPSSFDEKKVSQ-----FGSNVPXQRPGQPYEL-----APAYVY 267
Query: 250 LASDEARYISGTNLMVDGG 268
           LAS ++ Y++G  + V+GG
Sbjct: 268 LASSDSSYVTGQXIHVNGG 286

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 123/260 (47%), Gaps = 28/260 (10%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT---FFCHC-D 74
           RVA +TGG  G+G +  R  H  G  V ++  + N    V   L  E D    F  +  D
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN--DHVSTWLMHERDAGRDFKAYAVD 83
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDINVK 129
           V   E      +  +  FG +D+++NNAGI+       R+A        +++ V   ++ 
Sbjct: 84  VADFESCERCAEKVLADFGKVDVLINNAGIT-------RDATFMKMTKGDWDAVMRTDLD 136
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            +F+  K     M+ +  G I++I SV G+ G  G   Y  +K  + G  K +A E  K 
Sbjct: 137 AMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKR 196
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GI VN VSP  +AT +  A +P++    +A +  +  V R           ++VA  + F
Sbjct: 197 GITVNTVSPGYLATAMVEA-VPQD--VLEAKILPQIPVGRLGR-------PDEVAALIAF 246
Query: 250 LASDEARYISGTNLMVDGGF 269
           L SD+A +++G +L ++GG 
Sbjct: 247 LCSDDAGFVTGADLAINGGM 266

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 20/271 (7%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGEPDT-----F 69
           L G+VA++TGGATGIG++ V+   + G+ V IA  + + L     +     P T      
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
              C++  EE+V + V  T++ FG ++ +VNN G  G             +  V + N+ 
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG--GQFLSPAEHISSKGWHAVLETNLT 133
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           G F+  K      + +  G+I++I     A   L  H+   ++  V  L K++A E    
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHS-GAARAGVYNLTKSLALEWACS 192
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERT--EDAMVGFRNFVARNANMQGTELTANDVANAV 247
           GIR+NCV+P  + +  A+ +     ++  E +   F+   A+   +        +V++ V
Sbjct: 193 GIRINCVAPGVIYSQTAVENYGSWGQSFFEGS---FQKIPAKRIGV------PEEVSSVV 243
Query: 248 LFLASDEARYISGTNLMVDGGFTSVNHSLRV 278
            FL S  A +I+G ++ VDGG +   HS  V
Sbjct: 244 CFLLSPAASFITGQSVDVDGGRSLYTHSYEV 274

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 8/253 (3%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           VALITG  +GIG +T       G  V  +   +  + +   + +G          DV+ E
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89
Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
               +AV   V KFG LDI+V NAGI+G   P I +    E+++   +N++G F  +   
Sbjct: 90  LQXRNAVRDLVLKFGHLDIVVANAGINGVWAP-IDDLKPFEWDETIAVNLRGTFLTLHLT 148
Query: 139 ARIMIPQTKGTIISICSVAGA--IGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
              +  +  G I+ + S+ G       G  AYT +K A + + + +A ELGK+ IRVN V
Sbjct: 149 VPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAV 208
Query: 197 SPYAVATGLAL-AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
            P A+ T ++    L  EE T   +   +  V       G    + DVA  + FL S+ A
Sbjct: 209 CPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPG---RSEDVAELIRFLVSERA 265
Query: 256 RYISGTNLMVDGG 268
           R+++G+ + +DGG
Sbjct: 266 RHVTGSPVWIDGG 278

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD----NLGQQVCQSLGGEPDTF 69
           ++L G+  LITGG +GIG +    F K GA + IA + +    N  +Q  +  G +    
Sbjct: 43  EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK--CV 100
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               D++ E+     V  TV + G+L+I+VNN      P   +      + EK F IN+ 
Sbjct: 101 LLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVA-QQYPQQGLEYITAEQLEKTFRINIF 159
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             FH  K A   +  +    II+  S+    G      Y+ +K A++   ++++  L + 
Sbjct: 160 SYFHVTKAALSHL--KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQK 217
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRVN V+P  + T L  +   E++ ++     F + V      Q  EL     A A ++
Sbjct: 218 GIRVNGVAPGPIWTPLIPSSFDEKKVSQ-----FGSNVPMQRPGQPYEL-----APAYVY 267
Query: 250 LASDEARYISGTNLMVDGG 268
           LAS ++ Y++G  + V+GG
Sbjct: 268 LASSDSSYVTGQMIHVNGG 286

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 87.4 bits (215), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 97/194 (50%), Gaps = 23/194 (11%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI--------ADVQDNLGQQVCQSLGGE 65
            +L G   LITGGA+G+G + V  F   GAKV +        A+++ + G  V   +G  
Sbjct: 1   MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVG-- 58
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADL-SEFEK 122
                   DV   ED   A    V +FG +D ++ NAGI        D+ E  L + F++
Sbjct: 59  --------DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDE 110
Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           VF INVKG  H +K     ++  ++G +I   S AG     G   YT +KHA++GL + +
Sbjct: 111 VFHINVKGYIHAVKACLPALV-ASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVREL 169
Query: 183 AAELGKYGIRVNCV 196
           A EL  Y +RVN V
Sbjct: 170 AFELAPY-VRVNGV 182

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 87.4 bits (215), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 117/262 (44%), Gaps = 21/262 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKV--CIADVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           + A +TG ++GIG +  R     G  V  C  D + N+   V        D     CDVT
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAK-NVSAAVDGLRAAGHDVDGSSCDVT 83
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             ++V +AV   VE+FG + I+VN+AG +G    +  + D + +  V D N+ GVF   +
Sbjct: 84  STDEVHAAVAAAVERFGPIGILVNSAGRNGGG--ETADLDDALWADVLDTNLTGVFRVTR 141
Query: 137 HAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
              R   M     G I++I S  G  G +    YT SKH V+G  K+V  EL K GI VN
Sbjct: 142 EVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVN 201
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR------NANMQ-GTELTANDVANAV 247
            V P  V T       P  ER  +          +      NA +  G   T  +VA  V
Sbjct: 202 AVCPGYVET-------PMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLV 254
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L +D A  I+   L V GG 
Sbjct: 255 GYLVTDAAASITAQALNVCGGL 276

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 19/222 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC-DVTK 77
           +V LITG + GIGE   R     GAK+ +   +    + +   +     T      DVT 
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTD 64
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
              V +     V+ +G +D++VNNAG+   P   +    + E+E++ D+N+KGV  G+  
Sbjct: 65  RHSVAAFAQAAVDTWGRIDVLVNNAGVM--PLSPLAAVKVDEWERMIDVNIKGVLWGIGA 122
Query: 138 AARIMIPQTKGTIISICSVAGAIGGLG--PHA--YTGSKHAVLGLNKNVAAELGKYGIRV 193
              IM  Q  G II+I    G+IG L   P A  Y  +K AV  ++  +  E     IRV
Sbjct: 123 VLPIMEAQRSGQIINI----GSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRV 176
Query: 194 NCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANM 233
            CV+P  V + LA  + H    E T  AM  +R    + A++
Sbjct: 177 TCVNPGVVESELAGTITH----EETMAAMDTYRAIALQPADI 214

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 85
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAELADELWLDVVETNLTGVFRV 141
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 202 VNAVCPGWVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 256
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 257 AYLIGPGAAAVTAQALNVCGGL 278

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 113/270 (41%), Gaps = 44/270 (16%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV------------CIADVQDNLGQQVCQSLG 63
           L GR  ++TGG  GIG     +F + GA V            C+AD+ D LG        
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADL-DQLGSG------ 60
Query: 64  GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS--EFE 121
                     DV+      +     VE+FG +D++  NAG+     PD   A ++  +  
Sbjct: 61  ---KVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGV----FPDAPLATMTPEQLN 113
Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNK 180
            +F +NV G F+ ++     +I    G ++   S+ G I G  G   Y  +K A LG  +
Sbjct: 114 GIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMR 173
Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM--QGTEL 238
             A EL  + I VN +             +P    TE  +     ++A  A     G   
Sbjct: 174 TAAIELAPHKITVNAI-------------MPGNIMTEGLLENGEEYIASMARSIPAGALG 220
Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
           T  D+ +   FLA+ EA YI+G  + VDGG
Sbjct: 221 TPEDIGHLAAFLATKEAGYITGQAIAVDGG 250

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 85
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAELADELWLDVVETNLTGVFRV 141
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 202 VNAVCPGFVETPMAASVREHFSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 256
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 257 AYLIGPGAAAVTAQALNVCGGL 278

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 35/264 (13%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           V L+TGG+ GIG +  RL  + G +V +      +  D +   + +S GGE        D
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-GGE--AVAIPGD 84
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF-- 132
           V    D+ +       +FG LD +VNNAGI   P   + E  +   E+   +NV G    
Sbjct: 85  VGNAADIAAXFSAVDRQFGRLDGLVNNAGIVDYP-QRVDEXSVERIERXLRVNVTGSILC 143
Query: 133 --HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAV----LGLNKNVAAE 185
               ++  +R+   Q  G I+++ S A  +G    +  Y  SK A+    +GL + VAAE
Sbjct: 144 AAEAVRRXSRLYSGQ-GGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAE 202
Query: 186 LGKYGIRVNCVSPYAVATGL-ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
               GIRVN V P  + T L A   LP+  R     V  +                 +VA
Sbjct: 203 ----GIRVNAVRPGIIETDLHASGGLPDRAREXAPSVPXQR-----------AGXPEEVA 247
Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           +A+L+L S  A Y++G+ L V GG
Sbjct: 248 DAILYLLSPSASYVTGSILNVSGG 271

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 8   VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 65
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 66  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGAT----AELADELWLDVVETNLTGVFRV 121
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 122 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 181
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 182 VNAVCPGFVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 236
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 237 AYLIGPGAAAVTAQALNVCGGL 258

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 81
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 82  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAELADELWLDVVETNLTGVFRV 137
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 198 VNAVCPGFVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 252
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 253 AYLIGPGAAAVTAQALNVCGGL 274

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 85
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAELADELWLDVVETNLTGVFRV 141
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 202 VNAVCPGFVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 256
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 257 AYLIGPGAAAVTAQALNVCGGL 278

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 85
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAELADELWLDVVETNLTGVFRV 141
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 202 VNAVCPGFVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 256
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 257 AYLIGPGAAAVTAQALNVCGGL 278

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 107/253 (42%), Gaps = 15/253 (5%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVT 76
           R ALIT G  G+G+         G  V +    D    +  +      E    F   DVT
Sbjct: 8   RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVT 67
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
           K+ED+   V+  +  FG +D ++NNAG        + + +  E+ ++   N+  VFH +K
Sbjct: 68  KKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLK 127
Query: 137 HAARIMIPQTKGTIIS--ICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
               +M  Q  G II+        A G +   A+  +K  ++ L K VA E  +YGI  N
Sbjct: 128 LVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITAN 187
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V P  +   +  A + E           R     N  + G   T  D+A  + FL  D+
Sbjct: 188 MVCPGDIIGEMKEATIQEA----------RQLKEHNTPI-GRSGTGEDIARTISFLCEDD 236
Query: 255 ARYISGTNLMVDG 267
           +  I+GT + V G
Sbjct: 237 SDMITGTIIEVTG 249

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 81
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 82  SVPEIEALVAAVVERYGPVDVLVNNAGRLGGGAT----AELADELWLDVVETNLTGVFRV 137
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 198 VNAVCPGFVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 252
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 253 AYLIGPGAAAVTAQALNVCGGL 274

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 85
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRLGGGAT----AELADELWLDVVETNLTGVFRV 141
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 202 VNAVCPGFVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 256
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 257 AYLIGPGAAAVTAQALNVCGGL 278

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVC--QSLGGEPDT 68
           +++   GR A +TGGA G+G   VR     G KV IAD+ QD++ + +   ++ G  P+ 
Sbjct: 2   SLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEV 61
Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                DV   E    A D    +FG + I+ NNAG++      I E+   +++ +  +N+
Sbjct: 62  MGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVN--LFQPIEESSYDDWDWLLGVNL 119
Query: 129 KGVFHGMKHAARIMIPQTK------GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
            GV +G+      M+ + K      G +++  S+A  +    P  Y  +K AV GL++++
Sbjct: 120 HGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESL 179
Query: 183 AAELGKYGIRVNCVSP 198
              L KY I V+ + P
Sbjct: 180 HYSLLKYEIGVSVLCP 195

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 112/257 (43%), Gaps = 20/257 (7%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH----C 73
           G+   +TG   GIG +T   F + GAKV   D          Q+   E   F        
Sbjct: 7   GKNVWVTGAGKGIGYATALAFVEAGAKVTGFD----------QAFTQEQYPFATEVMDVA 56
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D  +   VC  +    E+   LD +VN AGI      D  +    ++++ F +NV G F+
Sbjct: 57  DAAQVAQVCQRLLAETER---LDALVNAAGILRMGATD--QLSKEDWQQTFAVNVGGAFN 111
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +        Q  G I+++ S A     +G  AY  SK A+  L  +V  EL   G+R 
Sbjct: 112 LFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRC 171
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N VSP +  T +       ++  E  + GF         + G      ++AN +LFLASD
Sbjct: 172 NVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPL-GKIARPQEIANTILFLASD 230
Query: 254 EARYISGTNLMVDGGFT 270
            A +I+  +++VDGG T
Sbjct: 231 LASHITLQDIVVDGGST 247

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 116/260 (44%), Gaps = 31/260 (11%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R AL+TGG+ GIG +        G +V IA       ++  QSLG  P       D+ K+
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNP---EEAAQSLGAVP----LPTDLEKD 55
Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS----EFEKVFDINVKGVFHG 134
            D    V   +E  G L ++V+ A +      ++R+  L     E+ +V  +++   F  
Sbjct: 56  -DPKGLVKRALEALGGLHVLVHAAAV------NVRKPALELSYEEWRRVLYLHLDVAFLL 108
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGP---HAYTGSKHAVLGLNKNVAAELGKYGI 191
            + AA  M     G ++ I SV     G GP    AYT +K A+LGL + +A E  + GI
Sbjct: 109 AQAAAPHMAEAGWGRVLFIGSVTTFTAG-GPVPIPAYTTAKTALLGLTRALAKEWARLGI 167
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN + P  V T      LP  +  E     +    AR     G      ++A     L 
Sbjct: 168 RVNLLCPGYVETEFT---LPLRQNPEL----YEPITARIP--MGRWARPEEIARVAAVLC 218
Query: 252 SDEARYISGTNLMVDGGFTS 271
            DEA Y++G  + VDGGF +
Sbjct: 219 GDEAEYLTGQAVAVDGGFLA 238

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 122/268 (45%), Gaps = 28/268 (10%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCH 72
           RL G+VAL+TG   GIG +      + GAKV +  A+   +  + V +      D     
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGV 131
            D+ +  ++    D  V  FG LDI V+N+G+ S     D+ E    EF++VF +N +G 
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTE---EEFDRVFSLNTRGQ 131
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYG 190
           F   + A R +     G I+   S       +  H+ Y+GSK AV    +  + + G   
Sbjct: 132 FFVAREAYRHLT--EGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKK 189
Query: 191 IRVNCVSPYAVATGL----ALAHLPE------EERTEDAMVGFRNFVARNANMQGTELTA 240
           I VN V+P    T +    +  ++P       E+R +  M    + + RN   Q      
Sbjct: 190 ITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQ--MAAHASPLHRNGWPQ------ 241
Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
            DVAN V FL S E  +++G  L +DGG
Sbjct: 242 -DVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 113/242 (46%), Gaps = 28/242 (11%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-----PDTFF 70
           L G+VALITG ++GIGE+T     +  A    A        +  ++LG E          
Sbjct: 5   LQGKVALITGASSGIGEATA----RALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHV 60
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
              DV   + V +AV  TVE  G LDI+VNNAGI    P  D   AD +++ ++ D N+ 
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVED---ADTTDWTRMIDTNLL 117
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           G+ + M  AA   + ++KGT++ + S+AG +       Y  +K  V   ++ +  E+ + 
Sbjct: 118 GLMY-MTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTER 176
Query: 190 GIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           G+RV  + P    T L   + H   +E  E  +   R            +L A D+A AV
Sbjct: 177 GVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIR------------KLQAQDIAEAV 224
Query: 248 LF 249
            +
Sbjct: 225 RY 226

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 124/287 (43%), Gaps = 44/287 (15%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL--------GQQVCQSLGGEP 66
           R+  +V L+TGGA G G S      + GA + + D+  ++          +  +  G E 
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66
Query: 67  D-----TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFE 121
           +      +    DV     V   +   V +FG LD++V NAGI    CP      +  F 
Sbjct: 67  EKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGI----CPLGAHLPVQAFA 122
Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-----------YTG 170
             FD++  GV + + HAA   +  +  +II+  SVAG I    P             Y+ 
Sbjct: 123 DAFDVDFVGVINTV-HAALPYL-TSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSY 180
Query: 171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP---------EEERTEDAMV 221
           +K  V      +AA+L    IR N + P  V T + L   P         E     DA++
Sbjct: 181 AKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDM-LNSAPMYRQFRPDLEAPSRADALL 239
Query: 222 GFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
            F    A    M    + A+D++NAV FLASDE+RY++G    VD G
Sbjct: 240 AFPAMQA----MPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDT 68
           P    L G+VAL+TG   GIG        + G KV +  A+  ++  + V        D 
Sbjct: 22  PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDA 81
Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                +V   ED+    +  V+ FG LDI+ +N+G+       +++    EF++VF IN 
Sbjct: 82  ACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV--VSFGHVKDVTPEEFDRVFTINT 139
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELG 187
           +G F   + A + +  +  G +I + S+ G    +  HA Y+GSK A+    + +A ++ 
Sbjct: 140 RGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA 197
Query: 188 KYGIRVNCVSPYAVATGLALA----HLPEEERTEDAMVGFRNFVARNANMQGTELT---- 239
              I VN V+P  + T +  A    ++P  E   +        V   A +Q + L     
Sbjct: 198 DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSN------EEVDEYAAVQWSPLRRVGL 251
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             D+A  V FLAS++  +++G  + +DGG
Sbjct: 252 PIDIARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDT 68
           P    L G+VAL+TG   GIG        + G KV +  A+  ++  + V        D 
Sbjct: 22  PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDA 81
Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                +V   ED+    +  V+ FG LDI+ +N+G+       +++    EF++VF IN 
Sbjct: 82  ACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV--VSFGHVKDVTPEEFDRVFTINT 139
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELG 187
           +G F   + A + +  +  G +I + S+ G    +  HA Y+GSK A+    + +A ++ 
Sbjct: 140 RGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA 197
Query: 188 KYGIRVNCVSPYAVATGLALA----HLPEEERTEDAMVGFRNFVARNANMQGTELT---- 239
              I VN V+P  + T +  A    ++P  E   +        V   A +Q + L     
Sbjct: 198 DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSN------EEVDEYAAVQWSPLRRVGL 251
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             D+A  V FLAS++  +++G  + +DGG
Sbjct: 252 PIDIARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 13/259 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCD 74
           L G+ AL+TG A G+G +        GA+V + D++  L  +   +L  +  D      D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT E  + +A      +   +DI++NNAGI       + E +L  ++KV D N+   F  
Sbjct: 67  VTDELAIEAAFSKLDAEGIHVDILINNAGIQ--YRKPMVELELENWQKVIDTNLTSAFLV 124
Query: 135 MKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            + AA+ MI +  G  II+I S+           YT +K  +  L  ++AAE  ++ I+ 
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT 184
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N + P  + T +  A + +++        F ++V  +   Q        +  A+ FL+S 
Sbjct: 185 NAIGPGYILTDMNTALIEDKQ--------FDSWVKSSTPSQRWGRPEELIGTAI-FLSSK 235
Query: 254 EARYISGTNLMVDGGFTSV 272
            + YI+G  + VDGG+ +V
Sbjct: 236 ASDYINGQIIYVDGGWLAV 254

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 68/277 (24%)
Query: 22  LITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           L+TGG+ GIG++ V L  ++     I  D+Q        QS   E +  F   D+TK++D
Sbjct: 8   LVTGGSKGIGKAVVELLLQNKNHTVINIDIQ--------QSFSAE-NLKFIKADLTKQQD 58
Query: 81  VCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDINV-------KGV 131
           + + +D+   K  + D +  NAGI   G+    I + D+   +KV D+NV       KG+
Sbjct: 59  ITNVLDII--KNVSFDGIFLNAGILIKGS----IFDIDIESIKKVLDLNVWSSIYFIKGL 112
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            + +K  A I+   +       C +A         AYT SK A+    K++A +L KY I
Sbjct: 113 ENNLKVGASIVFNGSDQ-----CFIAKP----NSFAYTLSKGAIAQXTKSLALDLAKYQI 163
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL------------- 238
           RVN V P  V T L                 +RN + + AN  G                
Sbjct: 164 RVNTVCPGTVDTDL-----------------YRNLIQKYANNVGISFDEAQKQEEKEFPL 206
Query: 239 ----TANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
                  ++A  V+FL SD++++ +G  + +DGG+T+
Sbjct: 207 NRIAQPQEIAELVIFLLSDKSKFXTGGLIPIDGGYTA 243

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 10/198 (5%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + + G + LITG   GIG  T   F K  +K+ + D+  +  ++    C+ LG +  TF 
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
             C  +  ED+ S+      + G + I+VNNAG+      D+      + EK F++NV  
Sbjct: 87  VDC--SNREDIYSSAKKVKAEIGDVSILVNNAGV--VYTSDLFATQDPQIEKTFEVNVLA 142
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY- 189
            F   K     M     G I+++ S AG +      AY  SK A +G +K +  EL    
Sbjct: 143 HFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQ 202
Query: 190 --GIRVNCVSPYAVATGL 205
             G++  C+ P  V TG 
Sbjct: 203 ITGVKTTCLCPNFVNTGF 220

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCDVT 76
           GR A++TGGA+GIG +T   F + GA++ ++DV     +Q    L G+  D     CDV 
Sbjct: 31  GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVR 90
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHGM 135
             +++    D      G +D++ +NAGI  A P   +   D   +  V DI++ G  H +
Sbjct: 91  HLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDD---WRWVIDIDLWGSIHAV 147
Query: 136 K-HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +    R++   T G I    S AG +   G   Y  +K+ V+GL + +A E+   GI V+
Sbjct: 148 EAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVS 207
Query: 195 CVSPYAVATGL 205
            + P  V T L
Sbjct: 208 VLCPMVVETKL 218

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 122/268 (45%), Gaps = 28/268 (10%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCH 72
           RL G+VAL+TG   GIG +      + GAKV +  A+   +  + V +      D     
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGV 131
            D+ +  ++    D  V  FG LDI V+N+G+ S     D+ E    EF++VF +N +G 
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTE---EEFDRVFSLNTRGQ 131
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYG 190
           F   + A R +     G I+   S       +  H+ ++GSK AV    +  + + G   
Sbjct: 132 FFVAREAYRHLT--EGGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKK 189
Query: 191 IRVNCVSPYAVATGL----ALAHLPE------EERTEDAMVGFRNFVARNANMQGTELTA 240
           I VN V+P    T +    +  ++P       E+R +  M    + + RN   Q      
Sbjct: 190 ITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQ--MAAHASPLHRNGWPQ------ 241
Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
            DVAN V FL S E  +++G  L +DGG
Sbjct: 242 -DVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D+T E++   AVD      G L  +V+ AG S    P I + D   + +  D+NV G  
Sbjct: 70  TDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGP-ITQVDSEAWRRTVDLNVNGTM 128
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           + +KHAAR M+    G+ + I S+A +       AY  +K AV  L +  A ELG   +R
Sbjct: 129 YVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVR 188
Query: 193 VNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           VN + P  + T L  A     E + D AM      + R   ++       DVAN  +FL 
Sbjct: 189 VNSIRPGLIRTDLVAAITESAELSSDYAMC---TPLPRQGEVE-------DVANMAMFLL 238
Query: 252 SDEARYISGTNLMVDGG 268
           SD A +++G  + VDGG
Sbjct: 239 SDAASFVTGQVINVDGG 255

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 18/262 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA-----DVQDNLGQQVCQSLGGEPDTFF 70
           L G  AL+TGG+ GIG   V      GA V        ++ D L Q   +    E     
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV-- 64
Query: 71  CHCDVTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
             CD++   +    ++     F G L+I+VNNAGI      + ++  + ++  +  IN +
Sbjct: 65  --CDLSSRSERQELMNTVANHFHGKLNILVNNAGI--VIYKEAKDYTVEDYSLIMSINFE 120
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             +H    A   +    +G ++ I SV+GA+       Y  +K A+  L + +A E  K 
Sbjct: 121 AAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD 180
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            IRVN V P  +AT L    + + E+ E+        + R A  +  E    ++A  V F
Sbjct: 181 NIRVNGVGPGVIATSLVEMTIQDPEQKEN----LNKLIDRCALRRMGE--PKELAAMVAF 234
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           L    A Y++G  + VDGG  +
Sbjct: 235 LCFPAASYVTGQIIYVDGGLMA 256

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 122/298 (40%), Gaps = 68/298 (22%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI----------------------------ADVQ 51
           VAL+TG A  +G S     H  G  VC+                            AD+ 
Sbjct: 9   VALVTGAAKRLGSSIAEALHAEGYTVCLHYHRSAADASTLAATLNARRPNSAITVQADLS 68
Query: 52  DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD 111
           +       ++ G  P T F  C         + VD     +G  D++VNNA  S  P P 
Sbjct: 69  NVATASFSETDGSVPVTLFSRCS--------ALVDACYMHWGRCDVLVNNAS-SFYPTPL 119
Query: 112 IRE---------ADLSEFE----KVFDINVKGVFHGMKHAARIMI---PQTKGTIISICS 155
           +R+          D    E     +F  N    +  +K  A+ +     + +GT  SI +
Sbjct: 120 LRKDAGEGGSSVGDKESLEVAAADLFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVN 179
Query: 156 VAGAIGG---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE 212
           +  A+     LG   YT +K A+ GL ++ A EL    IRVN VSP        L+ LP+
Sbjct: 180 MVDAMTSQPLLGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSP-------GLSVLPD 232
Query: 213 EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                D     +    R   +     +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 233 -----DMPFSVQEDYRRKVPLYQRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGGYS 285

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 18/262 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA-----DVQDNLGQQVCQSLGGEPDTFF 70
           L G  AL+TGG+ GIG   V      GA V        ++ D L Q   +    E     
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV-- 63
Query: 71  CHCDVTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
             CD++   +    ++     F G L+I+VNNAGI      + ++  + ++  +  IN +
Sbjct: 64  --CDLSSRSERQELMNTVANHFHGKLNILVNNAGI--VIYKEAKDYTVEDYSLIMSINFE 119
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             +H    A   +    +G ++ I SV+GA+       Y  +K A+  L + +A E  K 
Sbjct: 120 AAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD 179
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            IRVN V P  +AT L    + + E+ E+        + R A  +  E    ++A  V F
Sbjct: 180 NIRVNGVGPGVIATSLVEMTIQDPEQKEN----LNKLIDRCALRRMGE--PKELAAMVAF 233
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           L    A Y++G  + VDGG  +
Sbjct: 234 LCFPAASYVTGQIIYVDGGLMA 255

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 127/279 (45%), Gaps = 31/279 (11%)
Query: 6   STDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVC---QS 61
           S+  S A + L G+VAL TG   GIG        + GA V +         ++V    + 
Sbjct: 9   SSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK 68
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFE 121
           LG +        D++K  +V +  D  V  FG LD +++N+G+    C ++ E     F+
Sbjct: 69  LGAQ--GVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME-VWCDEL-EVTQELFD 124
Query: 122 KVFDINVKGVF----HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVL 176
           KVF++N +G F     G+KH  R       G II   S+A  + G+  HA Y GSK AV 
Sbjct: 125 KVFNLNTRGQFFVAQQGLKHCRR------GGRIILTSSIAAVMTGIPNHALYAGSKAAVE 178
Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN-----A 231
           G  +  A + G  G+ VNC++P  V T      + +E     A  G++           A
Sbjct: 179 GFCRAFAVDCGAKGVTVNCIAPGGVKT-----DMFDENSWHYAPGGYKGMPQEKIDEGLA 233
Query: 232 NMQGTELTAN--DVANAVLFLASDEARYISGTNLMVDGG 268
           NM   +      D+  AV  L  +E+ +I+G  + + GG
Sbjct: 234 NMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 115/271 (42%), Gaps = 42/271 (15%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV------------CIADVQDNLGQQVCQSLG 63
           L  +  L+TGG  GIG + V  F   GA +            C++  Q   G QV  S+ 
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-GFQVTGSV- 69
Query: 64  GEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-TLDIMVNNAG-ISGAPCPDIREADLSEFE 121
                    CD +   +    +      FG  LDI++NN G I   P  D    D S   
Sbjct: 70  ---------CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFS--- 117
Query: 122 KVFDI--NVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
             F I  N++  +H  + A  ++     G II + S+AG +       Y+ +K A+  L 
Sbjct: 118 --FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLA 175
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           +N+A E    GIR N V+P  +AT LA A   +E         F+  V     + G    
Sbjct: 176 RNLACEWASDGIRANAVAPAVIATPLAEAVYDDE---------FKKVVISRKPL-GRFGE 225
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFT 270
             +V++ V FL    A YI+G  + VDGG T
Sbjct: 226 PEEVSSLVAFLCMPAASYITGQTICVDGGLT 256

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 119/262 (45%), Gaps = 32/262 (12%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCHCDVT 76
           +VA ITGG +GIG     +F +HG    IA           + L G           DV 
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR 87
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
               V +AVD  +++FG +DI++N A      CP       + F+ V DI+  G F+  +
Sbjct: 88  APPAVMAAVDQALKEFGRIDILINCAA-GNFLCP-AGALSFNAFKTVMDIDTSGTFNVSR 145
Query: 137 HAARIMIPQTKGTIISICSVAGAIG-GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
                      G I++I +  G  G  L  HA + +K AV  + +++A E G   IRVN 
Sbjct: 146 VLYEKFFRDHGGVIVNITATLGNRGQALQVHAGS-AKAAVDAMTRHLAVEWGPQNIRVNS 204
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN---------DVANA 246
           ++P  ++             TE    G R      A++  T++TA+         ++A++
Sbjct: 205 LAPGPISG------------TE----GLRRLGGPQASLS-TKVTASPLQRLGNKTEIAHS 247
Query: 247 VLFLASDEARYISGTNLMVDGG 268
           VL+LAS  A Y++G  L+ DGG
Sbjct: 248 VLYLASPLASYVTGAVLVADGG 269

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-----PDTFF 70
           L G+VALITG ++GIGE+T     +  A    A        +  ++LG E          
Sbjct: 5   LQGKVALITGASSGIGEATA----RALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHV 60
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
              DV   + V +AV  TVE  G LDI+VNNAGI    P  D   AD +++ +  D N+ 
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVED---ADTTDWTRXIDTNLL 117
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           G+ +  + AA   + ++KGT++   S+AG +       Y  +K  V   ++ +  E+ + 
Sbjct: 118 GLXYXTR-AALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTER 176
Query: 190 GIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           G+RV  + P    T L   + H   +E  E  +   R            +L A D+A AV
Sbjct: 177 GVRVVVIEPGTTDTELRGHITHTATKEXYEQRISQIR------------KLQAQDIAEAV 224
Query: 248 LF 249
            +
Sbjct: 225 RY 226

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 28/252 (11%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           +V +ITG + GIG   VR +     +V          + +  S   +PD      D++K 
Sbjct: 29  KVVVITGASQGIGAGLVRAYRDRNYRVVATS------RSIKPS--ADPDIHTVAGDISKP 80
Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           E     V   +E+FG +D +VNNAG+  A  P + E    +++    +NV G FH  + A
Sbjct: 81  ETADRIVREGIERFGRIDSLVNNAGVFLA-KPFV-EXTQEDYDHNLGVNVAGFFHITQRA 138
Query: 139 ARIMIPQTKGTIISICSVAGAIGGLG-PHAYTG-SKHAVLGLNKNVAAELGKYGIRVNCV 196
           A   + Q  G I+SI +       +G P A    +K  +  + +++A E  + G+RVN V
Sbjct: 139 AAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGVRVNAV 198
Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
           SP  + T       P E  T   + G  + V R   ++       DV +AVL+L  + A 
Sbjct: 199 SPGVIKT----PXHPAE--THSTLAGL-HPVGRXGEIR-------DVVDAVLYL--EHAG 242
Query: 257 YISGTNLMVDGG 268
           +I+G  L VDGG
Sbjct: 243 FITGEILHVDGG 254

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 28/257 (10%)
Query: 17  VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           + R  ++TGG  GIG+     F + G KVC  D+ +       +     P+ F+ H DV 
Sbjct: 1   MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---RPNLFYFHGDVA 57
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNA--GISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
               +   V+  +EK   +D++VNNA  G  G     + E    EF+ +  + +K  +  
Sbjct: 58  DPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYE----EFDYILSVGLKAPYE- 112
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +    R  + + KG II+I S           AY  +K  ++ L   +A  LG   + VN
Sbjct: 113 LSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVN 171
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           C++P     G       +E   ED            A   G   T  D++N VLFL   +
Sbjct: 172 CIAP-----GWINVTEQQEFTQEDCA----------AIPAGKVGTPKDISNMVLFLCQQD 216
Query: 255 ARYISGTNLMVDGGFTS 271
             +I+G  ++VDGG + 
Sbjct: 217 --FITGETIIVDGGMSK 231

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 26/278 (9%)
Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA--DVQD------N 53
           S + + D    V RL G+ ALITG   GIG    R F   GA++ ++  DV +       
Sbjct: 4   SMTTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRA 63
Query: 54  LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR 113
           LG+Q         D      D+ + +          E FG LD++VNNAGIS  P P + 
Sbjct: 64  LGEQFGT------DVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGIS-HPQP-VV 115
Query: 114 EADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSK 172
           + D   F+    +N++          + M+   +G  II++ S A        +AY  SK
Sbjct: 116 DTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSK 175
Query: 173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
             ++   K +A ELG +GIR N V P  V T +      +E ++          +AR   
Sbjct: 176 AGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSA-------PMIARIP- 227
Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
             G     ++V++AV++LASD A  I+G ++ VDGG+T
Sbjct: 228 -LGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYT 264

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 104/201 (51%), Gaps = 10/201 (4%)
Query: 8   DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA--DVQDNLG-QQVCQSLGG 64
           D    +  L G+VA++TG + GIG +  R     GA+V +   DV+     ++   + GG
Sbjct: 19  DDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG 78
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEK 122
           E ++  C  D++  + + +     +   G  D++VNNAG+   G P   ++ A   E++ 
Sbjct: 79  EAESHAC--DLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPA---EWDA 133
Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           +  +N+K  +  ++  A  MI   +G II+I S+AG        AYT SK  + GL  + 
Sbjct: 134 LIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSA 193
Query: 183 AAELGKYGIRVNCVSPYAVAT 203
           A EL ++ +RV+ V+P +V T
Sbjct: 194 AEELRQHQVRVSLVAPGSVRT 214

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 25/264 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHC 73
            V +  ++TGG  GIG +  R     GA V +         +V + +G E    T    C
Sbjct: 12  FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 71
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVF 132
           DV+  + V   +       G +  ++ NAG+S   P  ++   D   F  V+D+NV GVF
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHED---FAFVYDVNVFGVF 128
Query: 133 HGMKHAARIMI-PQTKGTIISICSVAGAI-------GGLGPHAYTGSKHAVLGLNKNVAA 184
           +  +  A++ +  Q KG+I+   S++  I       G L    Y  SK A   L K +AA
Sbjct: 129 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAA 188
Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E    GIRVN +SP  V T    AH+ ++ R   A     + +  N   Q  E+T     
Sbjct: 189 EWASAGIRVNALSPGYVNTD-QTAHMDKKIRDHQA-----SNIPLNRFAQPEEMT----G 238
Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
            A+L L SD A Y++G    +DGG
Sbjct: 239 QAILLL-SDHATYMTGGEYFIDGG 261

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 125/266 (46%), Gaps = 41/266 (15%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI------------ADVQDNLGQQV--CQSLGG 64
           + AL+TG + G+G++      ++G  + I            A+  + LG +V   ++  G
Sbjct: 5   KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVG 64
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF 124
           +P          K +++   +D   E FG LD+ VNNA  SG   P + E + + ++   
Sbjct: 65  QP---------AKIKEMFQQID---ETFGRLDVFVNNAA-SGVLRP-VMELEETHWDWTM 110
Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVA 183
           +IN K +    + AA++M     G I+SI S+ G+I  L  +   G SK A+  L + +A
Sbjct: 111 NINAKALLFCAQEAAKLMEKNGGGHIVSISSL-GSIRYLENYTTVGVSKAALEALTRYLA 169
Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLP-EEERTEDAMVGFRNFVARNANMQGTELTAND 242
            EL    I VN VS  A+ T  AL H P  E+  ED         AR     G  +   D
Sbjct: 170 VELSPKQIIVNAVSGGAIDTD-ALKHFPNREDLLED---------ARQNTPAGRMVEIKD 219
Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           + + V FL S +A  I G  ++VDGG
Sbjct: 220 MVDTVEFLVSSKADMIRGQTIIVDGG 245

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 23/252 (9%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGE--PDTFF 70
           RL  R AL+TGG +GIG +    + + GA V I     ++   QQV ++L  E       
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQV-KALIEECGRKAVL 104
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D++ E    S V    E  G LDI+   AG   A  P+I++    +F++ F +NV  
Sbjct: 105 LPGDLSDESFARSLVHKAREALGGLDILALVAGKQTA-IPEIKDLTSEQFQQTFAVNVFA 163
Query: 131 VFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHA--YTGSKHAVLGLNKNVAAELG 187
           +F   + A  ++    KG +II+  S+        PH   Y  +K A+L  ++ +A ++ 
Sbjct: 164 LFWITQEAIPLL---PKGASIITTSSIQAY--QPSPHLLDYAATKAAILNYSRGLAKQVA 218
Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           + GIRVN V+P  + T L ++      +T+D +  F          Q  EL     A   
Sbjct: 219 EKGIRVNIVAPGPIWTALQISG----GQTQDKIPQFGQQTPMKRAGQPAEL-----APVY 269
Query: 248 LFLASDEARYIS 259
           ++LAS E+ Y++
Sbjct: 270 VYLASQESSYVT 281

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEP--DTFFCHCDVTK 77
           A+ITGGA  IG S     H+ G +V +     +   Q++   L          C  D++ 
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 73
Query: 78  EE---DVCS-AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL--SEFEKVFDINVKGV 131
                D C   +D +   FG  D++VNNA  +  P P +   D   +   K  D  V  +
Sbjct: 74  SSSLLDCCEDIIDCSFRAFGRCDVLVNNAS-AYYPTPLLPGDDTNGAADAKPIDAQVAEL 132
Query: 132 FHGMKHAARIMIP-----QTKG--------TIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           F     A   +I      Q +G        +++++C     +   G   YT +KHA+ GL
Sbjct: 133 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 192
Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLAL--AHLPEEERTEDAMVGFRNFVARNANMQGT 236
            +  A EL    IRVN V+P     GL+L    +P+E + E     +R    R   +  +
Sbjct: 193 TRAAALELAPRHIRVNAVAP-----GLSLLPPAMPQETQEE-----YR----RKVPLGQS 238
Query: 237 ELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           E +A  +A+A+ FL S +A YI+GT L VDGG 
Sbjct: 239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 39/273 (14%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEP--DTFFCHCDVTK 77
           A+ITGGA  IG S     H+ G +V +     +   Q++   L          C  D++ 
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 73
Query: 78  EE---DVCS-AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL--SEFEKVFDINVKGV 131
                D C   +D +   FG  D++VNNA  +  P P +   D   +   K  D  V  +
Sbjct: 74  SSSLLDCCEDIIDCSFRAFGRCDVLVNNAS-AYYPTPLLPGDDTNGAADAKPIDAQVAEL 132
Query: 132 FHGMKHAARIMIP-----QTKG--------TIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           F     A   +I      Q +G        +++++C     +   G   YT +KHA+ GL
Sbjct: 133 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDLPLPGFCVYTXAKHALGGL 192
Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLAL--AHLPEEERTEDAMVGFRNFVARNANMQGT 236
            +  A EL    IRVN V+P     GL+L     P+E + E     +R    R   +  +
Sbjct: 193 TRAAALELAPRHIRVNAVAP-----GLSLLPPAXPQETQEE-----YR----RKVPLGQS 238
Query: 237 ELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           E +A  +A+A+ FL S +A YI+GT L VDGG 
Sbjct: 239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 10/213 (4%)
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI-READLSEFEKV 123
           +P   +   ++  +     AV  T+  FG LD +VNNAG++     D  R+A ++  E+ 
Sbjct: 54  QPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERN 113
Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
             I+    ++ M H     +  T+G I++I S     G      Y  SK A L L +  A
Sbjct: 114 L-IH----YYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWA 168
Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
             L ++G+RVN V P  V T L    +   E  E  +      +A    +     T +++
Sbjct: 169 VALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAE----IAAKVPLGRRFTTPDEI 224
Query: 244 ANAVLFLASDEARYISGTNLMVDGGFTSVNHSL 276
           A+  +FL S  A + +G  L VDGG+T ++ +L
Sbjct: 225 ADTAVFLLSPRASHTTGEWLFVDGGYTHLDRAL 257

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 30/260 (11%)
Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVC-----IADVQDNLGQQVCQSLG 63
           + P ++R   R+AL+TG + GIG +  R   + G KV      + ++++   +  C+S  
Sbjct: 23  ARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAE--CKS-A 79
Query: 64  GEPDTFFCH-CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD-IREADLSEFE 121
           G P T   + CD++ EED+ S       +   +DI +NNAG++    PD +     S ++
Sbjct: 80  GYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLAR---PDTLLSGSTSGWK 136
Query: 122 KVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAG--AIGGLGPHAYTGSKHAVLG 177
            +F++NV  +    + A + M  +    G II+I S++G   +     H Y+ +K+AV  
Sbjct: 137 DMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTA 196
Query: 178 LNKNVAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           L + +  EL   +  IR  C+SP  V T  A      ++  E A   +            
Sbjct: 197 LTEGLRQELREAQTHIRATCISPGVVETQFAFKL--HDKDPEKAAATYEQMKC------- 247
Query: 236 TELTANDVANAVLFLASDEA 255
             L   DVA AV+++ S  A
Sbjct: 248 --LKPEDVAEAVIYVLSTPA 265

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 30/215 (13%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-----DNLGQQVC-------QSL 62
           R  GRVA++TG   G+G     LF + GAKV + D+      D   Q+         +  
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75
Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL----- 117
           GGE        D     D    ++  ++ FG +DI+VNNAGI       +R+  L     
Sbjct: 76  GGE-----AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGI-------LRDRSLVKTSE 123
Query: 118 SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG 177
            ++  V D+++KG F   + A   M  Q  G II   S +G  G  G   YT +K  ++G
Sbjct: 124 QDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIG 183
Query: 178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE 212
           L   VA E  +  +  N + P A A+ +    LP+
Sbjct: 184 LANTVAIEGARNNVLCNVIVPTA-ASRMTEGILPD 217

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 27/267 (10%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCHC 73
           L G  AL+TGG+ GIG + V      GA+V      +    + C  +  E   +     C
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDE-CLEIWREKGLNVEGSVC 77
Query: 74  DVTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADLSEF-EKVFDINVKGV 131
           D+    +    +      F G L+I+VNNAG+       +   +  +F EK ++I +   
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGV-------VIHKEAKDFTEKDYNIIMGTN 130
Query: 132 FHGMKHAARIMIPQTK----GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           F    H ++I  P  K    G +I + S+AG         Y+ SK A+  + K++A E  
Sbjct: 131 FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 190
Query: 188 KYGIRVNCVSPYAVATGL---ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           K  IRVN V+P  + T L   A+   P ++   D      NF+ +     G      +V+
Sbjct: 191 KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEID------NFIVKTP--MGRAGKPQEVS 242
Query: 245 NAVLFLASDEARYISGTNLMVDGGFTS 271
             + FL    A YI+G  +  DGGFT+
Sbjct: 243 ALIAFLCFPAASYITGQIIWADGGFTA 269

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
            ITG  +G GE+  R F + G  + +   ++   Q +   L  +        DV      
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAX 84
Query: 82  CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI 141
            +AVD   E+F TL  ++NNAG++    P  +  DL +++   D N+KG+     ++ R+
Sbjct: 85  SAAVDNLPEEFATLRGLINNAGLALGTDP-AQSCDLDDWDTXVDTNIKGLL----YSTRL 139
Query: 142 MIPQ-----TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
           ++P+        +I+++ SVAG     G H Y G+K  V   + N+  +L   G+RV  +
Sbjct: 140 LLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNL 199
Query: 197 SP 198
            P
Sbjct: 200 EP 201

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 117/261 (44%), Gaps = 32/261 (12%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI------ADVQDNLGQQVCQSLGGEPDTFFCH 72
           +VA++TG + GIG +        G  V I      A  ++  G+   ++ GG+  T    
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGK--IEAAGGKALT--AQ 83
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV+    V        E FG +D++VNNAGI   P   I E   + F++V  +N+KG F
Sbjct: 84  ADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIX--PLTTIAETGDAVFDRVIAVNLKGTF 141
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKYG 190
           + ++ AA+ +  +  G II+  +    +G L P    Y  +K  V      ++ EL    
Sbjct: 142 NTLREAAQRL--RVGGRIINXST--SQVGLLHPSYGIYAAAKAGVEAXTHVLSKELRGRD 197
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL--TANDVANAVL 248
           I VN V+P   AT L L    +E R             R A +   E   T  D+A AV 
Sbjct: 198 ITVNAVAPGPTATDLFLEGKSDEVRD------------RFAKLAPLERLGTPQDIAGAVA 245
Query: 249 FLASDEARYISGTNLMVDGGF 269
           FLA  +  +++G  L  +GG 
Sbjct: 246 FLAGPDGAWVNGQVLRANGGI 266

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 114/257 (44%), Gaps = 21/257 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF-CHCDVTK 77
           +V +ITGG++G G+     F K GA+V I        ++    +   P        DV  
Sbjct: 7   KVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRN 66
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            +D+   ++   EKFG +DI++NNA      CP   +  ++ +  V +I + G F+  + 
Sbjct: 67  TDDIQKXIEQIDEKFGRIDILINNAA-GNFICP-AEDLSVNGWNSVINIVLNGTFYCSQA 124
Query: 138 AARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRVNC 195
             +  I +  KG II+  +      G G      +K  VL   K +A E G KYGIRVN 
Sbjct: 125 IGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNA 184
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLA 251
           ++P  +            ERT  A   + +       +Q   L    T  ++A    +L 
Sbjct: 185 IAPGPI------------ERTGGADKLWISEEXAKRTIQSVPLGRLGTPEEIAGLAYYLC 232
Query: 252 SDEARYISGTNLMVDGG 268
           SDEA YI+GT    DGG
Sbjct: 233 SDEAAYINGTCXTXDGG 249

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
           V +L  RV ++TG ++G+G +  R   + GA V   D++   G++    LG      F +
Sbjct: 2   VXQLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAELGAA--VRFRN 59
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI--READ--LSEFEKVFDINV 128
            DVT E D  +A+    ++FG +  +VN AG   AP   I  R     L  F +   +N+
Sbjct: 60  ADVTNEADATAALAFAKQEFGHVHGLVNCAGT--APGEKILGRSGPHALDSFARTVAVNL 117
Query: 129 KGVFHGMKHAARIMI---PQT---KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
            G F+ ++ AA +     P     +G I++  S+A   G +G  AY  SK  V  L    
Sbjct: 118 IGTFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPA 177
Query: 183 AAELGKYGIRVNCVSP 198
           A EL ++GIRV  ++P
Sbjct: 178 ARELARFGIRVVTIAP 193

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 17/261 (6%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDV 75
           G+VA+ITG ++GIG +    F K GA + +   Q +   +  +SL  +          DV
Sbjct: 7   GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV 66
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              E V + V+     FG  DI+VNNAG        I EA   +++  ++++V       
Sbjct: 67  ATPEGVDAVVESVRSSFGGADILVNNAGTGSNET--IMEAADEKWQFYWELHVMAAVR-- 122
Query: 136 KHAARIMIPQTK----GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              AR ++P  +    G II   S+           Y  +K A++  +K +A E+ K  I
Sbjct: 123 --LARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNI 180
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT---ELTANDVANAVL 248
           RVNC++P  + T   +     +E T+D    ++ ++   A+         +  ++AN  +
Sbjct: 181 RVNCINPGLILTPDWIK--TAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFV 238
Query: 249 FLASDEARYISGTNLMVDGGF 269
           FL S+ A Y  G+   VDGG 
Sbjct: 239 FLCSERATYSVGSAYFVDGGM 259

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 40/257 (15%)
Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
           L+   + GIG +   +  + GA+V I    + L ++            +  CD+ K+   
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR--------YVVCDLRKD--- 71
Query: 82  CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI 141
              +DL  EK   +DI+V NAG  G       E    +F++  D     +F  M    R 
Sbjct: 72  ---LDLLFEKVKEVDILVLNAG--GPKAGFFDELTNEDFKEAID----SLFLNMIKIVRN 122
Query: 142 MIPQTK----GTIISICS--VAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
            +P  K    G I++I S  V   I  L  +    ++ A+ G  K ++ E+  YGI VNC
Sbjct: 123 YLPAMKEKGWGRIVAITSFSVISPIENL--YTSNSARMALTGFLKTLSFEVAPYGITVNC 180
Query: 196 VSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           V+P    T      L EE++ + ++ +  R                 ++A+ V FL S++
Sbjct: 181 VAPGWTETERVKELLSEEKKKQVESQIPMRRMA-----------KPEEIASVVAFLCSEK 229
Query: 255 ARYISGTNLMVDGGFTS 271
           A Y++G  ++VDGG + 
Sbjct: 230 ASYLTGQTIVVDGGLSK 246

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 6/209 (2%)
Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----QSLGGE 65
            P    L  R+ L+TG + GIG      + ++GA V +    +   +QV     +  G +
Sbjct: 6   QPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQ 65
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
           P  F         ED           +  LD +++NAG+ G  CP + E D   ++ V  
Sbjct: 66  PQWFILDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-MSEQDPQVWQDVMQ 124
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           +NV   F   +    +++    G+++   S  G  G     AY  SK A  G+ + +A E
Sbjct: 125 VNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADE 184
Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEE 214
             +  +RVNC++P    T +  +  P E+
Sbjct: 185 YQQR-LRVNCINPGGTRTAMRASAFPTED 212

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 116/264 (43%), Gaps = 25/264 (9%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPD 67
           ++QR   R  ++ G    IG +    F + GA V +    A           + LG    
Sbjct: 2   SLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RS 59
Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
                 D+T   +V +A+    +KFG +  +V+ AG   A    I E D + + +V D+N
Sbjct: 60  ALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIAR-KTIAEMDEAFWHQVLDVN 118
Query: 128 VKGVFHGMKHAARIMIPQTK--GTIISICSVAGAIGG-LGPHAYTGSKHAVLGLNKNVAA 184
           +  +F   K A    +P+    G I++  S AG  GG  G  AY  SK AV+   + +A 
Sbjct: 119 LTSLFLTAKTA----LPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAK 174
Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E+G   IRVN V P  ++T         E R   A           A     E ++ DVA
Sbjct: 175 EVGPK-IRVNAVCPGMISTTFHDTFTKPEVRERVA----------GATSLKREGSSEDVA 223
Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
             V FLASD+A Y++G    ++GG
Sbjct: 224 GLVAFLASDDAAYVTGACYDINGG 247

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 27/265 (10%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  LITG + GIG +T RLF + GAKV +       N+ + +  S+  +        
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIA-SMRADGGDAAFFA 63
Query: 74  DVTKEEDVCSA-VDLTVEKFGTLDIMVNNAG--ISGAPCPDIREADLSEFEKVFDINVKG 130
                 + C   VD  V KFG +D+++NNAG  +   P P+I   D + ++ V D N++ 
Sbjct: 64  ADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEI---DDTFYDAVMDANIRS 120
Query: 131 VFHGMKHAARIMIPQTKGT-----IISICSVAGAIGGLGPHAYTGSKHAVL-GLNKNVAA 184
           V    K A   +    K +     +IS  S+AG  GG       G+  A L  ++KN   
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVD 180
Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
              K G+R N VSP  V T          ++T+D     R+ ++    M G   TA ++A
Sbjct: 181 FHTKDGVRFNIVSPGTVDTAF------HADKTQDV----RDRISNGIPM-GRFGTAEEMA 229
Query: 245 NAVLFLASDEAR-YISGTNLMVDGG 268
            A LF AS  A  YI+G  L ++GG
Sbjct: 230 PAFLFFASHLASGYITGQVLDINGG 254

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDV 75
           G+VA+ITG ++GIG +    F K GA + +   Q +   +  +SL  +          DV
Sbjct: 7   GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV 66
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              E V + V+     FG  DI+VNNAG        I EA   +++  +++ V       
Sbjct: 67  ATPEGVDAVVESVRSSFGGADILVNNAGTGSNET--IMEAADEKWQFYWELLVMAAVR-- 122
Query: 136 KHAARIMIPQTK----GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              AR ++P  +    G II   S+           Y  +K A++  +K +A E+ K  I
Sbjct: 123 --LARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNI 180
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT---ELTANDVANAVL 248
           RVNC++P  + T   +     +E T+D    ++ ++   A+         +  ++AN  +
Sbjct: 181 RVNCINPGLILTPDWIK--TAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFV 238
Query: 249 FLASDEARYISGTNLMVDGGF 269
           FL S+ A Y  G+   VDGG 
Sbjct: 239 FLCSERATYSVGSAYFVDGGM 259

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 5/209 (2%)
Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE---- 65
            P    L  R+ L+TG + GIG      + ++GA V +    +   ++V Q +  E    
Sbjct: 6   QPKQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQ 65
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
           P  F         E+     D     +  LD +++NAG+ G   P + E D   ++ V  
Sbjct: 66  PQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGP-MSEQDPQIWQDVMQ 124
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           +NV   F   +    +++    G+++   S  G  G     AY  SK A  G+ + +A E
Sbjct: 125 VNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADE 184
Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEE 214
                +RVNC++P    T +  +  P E+
Sbjct: 185 YQNRSLRVNCINPGGTRTSMRASAFPTED 213

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 8   DSSPAV---QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQS 61
           DS+P     + L G+VA++TG A GIG +   +F + GA V   DV+   +NL +   + 
Sbjct: 200 DSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK- 258
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-----GTLDIMVNNAGISGAPCPDIREAD 116
           +GG         DVT ++    AVD   E       G  DI+VNNAGI+      +   D
Sbjct: 259 VGGTA----LWLDVTADD----AVDKISEHLRDHHGGKADILVNNAGITRDKL--LANMD 308
Query: 117 LSEFEKVFDINVKGVFH---GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH 173
            + ++ V  +N+        G+     I      G +I + S+AG  G  G   Y  +K 
Sbjct: 309 DARWDAVLAVNLLAPLRLTEGLVGNGSI---GEGGRVIGLSSIAGIAGNRGQTNYATTKA 365
Query: 174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM 233
            ++G+ + +A  L   GI +N V+P  + T +  A +P   R     VG R     N+ +
Sbjct: 366 GMIGITQALAPGLAAKGITINAVAPGFIETQMT-AAIPLATRE----VGRR----LNSLL 416
Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDG 267
           QG +    DVA A+ + AS  +  ++G  + V G
Sbjct: 417 QGGQPV--DVAEAIAYFASPASNAVTGNVIRVCG 448

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 8   DSSPAV---QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQS 61
           DS+P     + L G+VA++TG A GIG +   +F + GA V   DV+   +NL +   + 
Sbjct: 184 DSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK- 242
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-----GTLDIMVNNAGISGAPCPDIREAD 116
           +GG         DVT ++    AVD   E       G  DI+VNNAGI+      +   D
Sbjct: 243 VGGTA----LWLDVTADD----AVDKISEHLRDHHGGKADILVNNAGITRDKL--LANMD 292
Query: 117 LSEFEKVFDINVKGVFH---GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH 173
            + ++ V  +N+        G+     I      G +I + S+AG  G  G   Y  +K 
Sbjct: 293 DARWDAVLAVNLLAPLRLTEGLVGNGSI---GEGGRVIGLSSIAGIAGNRGQTNYATTKA 349
Query: 174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM 233
            ++G+ + +A  L   GI +N V+P  + T +  A +P   R     VG R     N+ +
Sbjct: 350 GMIGITQALAPGLAAKGITINAVAPGFIETQMT-AAIPLATRE----VGRR----LNSLL 400
Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDG 267
           QG +    DVA A+ + AS  +  ++G  + V G
Sbjct: 401 QGGQPV--DVAEAIAYFASPASNAVTGNVIRVCG 432

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 8   DSSPAV---QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQS 61
           DS+P     + L G+VA++TG A GIG +   +F + GA V   DV+   +NL +   + 
Sbjct: 221 DSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK- 279
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-----GTLDIMVNNAGISGAPCPDIREAD 116
           +GG         DVT ++    AVD   E       G  DI+VNNAGI+      +   D
Sbjct: 280 VGGTA----LWLDVTADD----AVDKISEHLRDHHGGKADILVNNAGITRDKL--LANMD 329
Query: 117 LSEFEKVFDINVKGVFH---GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH 173
            + ++ V  +N+        G+     I      G +I + S+AG  G  G   Y  +K 
Sbjct: 330 DARWDAVLAVNLLAPLRLTEGLVGNGSI---GEGGRVIGLSSIAGIAGNRGQTNYATTKA 386
Query: 174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM 233
            ++G+ + +A  L   GI +N V+P  + T +  A +P   R     VG R     N+ +
Sbjct: 387 GMIGITQALAPGLAAKGITINAVAPGFIETQMT-AAIPLATRE----VGRR----LNSLL 437
Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDG 267
           QG +    DVA A+ + AS  +  ++G  + V G
Sbjct: 438 QGGQPV--DVAEAIAYFASPASNAVTGNVIRVCG 469

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 8   DSSPAV---QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQS 61
           DS+P     + L G+VA++TG A GIG +   +F + GA V   DV+   +NL +   + 
Sbjct: 208 DSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK- 266
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-----GTLDIMVNNAGISGAPCPDIREAD 116
           +GG         DVT ++    AVD   E       G  DI+VNNAGI+      +   D
Sbjct: 267 VGGTA----LWLDVTADD----AVDKISEHLRDHHGGKADILVNNAGITRDKL--LANMD 316
Query: 117 LSEFEKVFDINVKGVFH---GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH 173
            + ++ V  +N+        G+     I      G +I + S+AG  G  G   Y  +K 
Sbjct: 317 DARWDAVLAVNLLAPLRLTEGLVGNGSI---GEGGRVIGLSSIAGIAGNRGQTNYATTKA 373
Query: 174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM 233
            ++G+ + +A  L   GI +N V+P  + T +  A +P   R     VG R     N+ +
Sbjct: 374 GMIGITQALAPGLAAKGITINAVAPGFIETQMT-AAIPLATRE----VGRR----LNSLL 424
Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDG 267
           QG +    DVA A+ + AS  +  ++G  + V G
Sbjct: 425 QGGQPV--DVAEAIAYFASPASNAVTGNVIRVCG 456

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 28/273 (10%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+ ALITG A    I     + FH+ GA++        L ++V +   G        C
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKC 78
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV+ +ED+ +      E +G+LDI+V++  I+ AP  + +   +    + F I +    +
Sbjct: 79  DVSLDEDIKNLKKFLEENWGSLDIIVHS--IAYAPKEEFKGGVIDTSREGFKIAMDISVY 136
Query: 134 GMKHAARIMIPQTKGT--IISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAELGKYG 190
            +    R ++P  +G    I   S  GA   +  +   G +K A+    + +A ++ K+G
Sbjct: 137 SLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHG 196
Query: 191 IRVNCVSPYAVATGLALA----HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            R+N +S   V T  A +    HL  E  T+              N  G  +T  DV + 
Sbjct: 197 HRINAISAGPVKTLAAYSITGFHLLMEHTTK-------------VNPFGKPITIEDVGDT 243
Query: 247 VLFLASDEARYISGTNLMVDGGFTSVNHSLRVF 279
            +FL SD AR I+G  + VD G+    H + VF
Sbjct: 244 AVFLCSDWARAITGEVVHVDNGY----HIMGVF 272

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 8   DSSPAV---QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQS 61
           DS+P     + L G+VA++TG A GIG +   +F + GA V   DV+   +NL +   + 
Sbjct: 192 DSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK- 250
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-----GTLDIMVNNAGISGAPCPDIREAD 116
           +GG         DVT ++    AVD   E       G  DI+VNNAGI+      +   D
Sbjct: 251 VGGTA----LWLDVTADD----AVDKISEHLRDHHGGKADILVNNAGITRDKL--LANMD 300
Query: 117 LSEFEKVFDINVKGVFH---GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH 173
            + ++ V  +N+        G+     I      G +I + S+AG  G  G   Y  +K 
Sbjct: 301 DARWDAVLAVNLLAPLRLTEGLVGNGSI---GEGGRVIGLSSIAGIAGNRGQTNYATTKA 357
Query: 174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM 233
            ++G+ + +A  L   GI +N V+P  + T +  A +P   R     VG R     N+ +
Sbjct: 358 GMIGITQALAPGLAAKGITINAVAPGFIETQMT-AAIPLATRE----VGRR----LNSLL 408
Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDG 267
           QG +    DVA A+ + AS  +  ++G  + V G
Sbjct: 409 QGGQPV--DVAEAIAYFASPASNAVTGNVIRVCG 440

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 22/262 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L GR+AL+TGG+ GIG+   +   + GA+V I              L    D      D+
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADL 86
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           + E           E    LDI+VNNAG S      +    +S +EKV  +NV  VF  +
Sbjct: 87  SSEAGARRLAQALGELSARLDILVNNAGTSWGAA--LESYPVSGWEKVMQLNVTSVFSCI 144
Query: 136 KHAARIM----IPQTKGTIISICSVAGAIGGLG--PHAYTGSKHAVLGLNKNVAAELGKY 189
           +    ++      +    +I+I SVAG I  +G   +AY  SK A+  L++ +A EL   
Sbjct: 145 QQLLPLLRRSASAENPARVINIGSVAG-ISAMGEQAYAYGPSKAALHQLSRMLAKELVGE 203
Query: 190 GIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
            I VN ++P    + +   +A+ P+    + A +             G      ++A   
Sbjct: 204 HINVNVIAPGRFPSRMTRHIANDPQALEADSASIPM-----------GRWGRPEEMAALA 252
Query: 248 LFLASDEARYISGTNLMVDGGF 269
           + LA     Y++G  + +DGGF
Sbjct: 253 ISLAGTAGAYMTGNVIPIDGGF 274

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----QSLGGEPDTFFCHCD 74
           R+ L+TG + GIG      + ++GA V +    +   +QV     +  G +P  F     
Sbjct: 11  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL 70
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
               E+        V  +  LD +++NAG+ G  CP + E +   ++ V  INV   F  
Sbjct: 71  TCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCP-MSEQNPQVWQDVMQINVNATFML 129
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            +    +++    G+++   S  G  G     AY  SK A  G+ + +A E  +  +RVN
Sbjct: 130 TQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVN 188
Query: 195 CVSPYAVATGLALAHLPEEE 214
           C++P    T +  +  P E+
Sbjct: 189 CINPGGTRTAMRASAFPTED 208

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 31/268 (11%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFC 71
           L  +V +I+G    +G +  R   + GA + +A    +  +++ +QV  +          
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT---GRRALSV 65
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             D+T +  V   VD T++ +G +D+++NNA       P ++    + FE + D     V
Sbjct: 66  GTDITDDAQVAHLVDETMKAYGRVDVVINNA----FRVPSMKPFANTTFEHMRDAIELTV 121
Query: 132 FHGMK--HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           F  ++        + ++KG ++++ S+          AY  +K A+L +++ +A ELG+ 
Sbjct: 122 FGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEK 181
Query: 190 GIRVNCVSPYAVATGLALAHLPEE-----ERTEDAMVGFRNFVARNANMQGTEL----TA 240
           GIRVN V P  +  G   ++   +        ED           NA   G++L    T 
Sbjct: 182 GIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIY---------NAAAAGSDLKRLPTE 232
Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
           ++VA+A+LF+ASD A  I+G  L V+ G
Sbjct: 233 DEVASAILFMASDLASGITGQALDVNCG 260

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 41/278 (14%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           A++TG A  IG +     H+ G +V I     A+   +L  ++ +          C  D+
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN--TAVVCQADL 83
Query: 76  TKEEDVCSAVDLTVEK----FGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVKG 130
           T    + ++ +  +      FG  D++VNNA  +  P P ++ + + +   K  +  V  
Sbjct: 84  TNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVAE 142
Query: 131 VFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHAV 175
           +  G    A  ++  +     KGT          I+++C        +    Y   KHA+
Sbjct: 143 LI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHAL 201
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           +GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   +  
Sbjct: 202 VGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLGR 249
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
            E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 250 REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 287

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 41/278 (14%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           A++TG A  IG +     H+ G +V I     A+   +L  ++ +          C  D+
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN--TAVVCQADL 63
Query: 76  TKEEDVCSAVDLTVEK----FGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVKG 130
           T    + ++ +  +      FG  D++VNNA  +  P P ++ + + +   K  +  V  
Sbjct: 64  TNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVAE 122
Query: 131 VFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHAV 175
           +  G    A  ++  +     KGT          I+++C        +    Y   KHA+
Sbjct: 123 LI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHAL 181
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           +GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   +  
Sbjct: 182 VGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLGR 229
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
            E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 230 REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 267

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 103/269 (38%), Gaps = 24/269 (8%)
Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG 63
           SN+    P    L  R+ L+TG + GIG      + ++GA V +    +   ++V Q + 
Sbjct: 1   SNAXHYQPKQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIA 60
Query: 64  GE----PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
            E    P  F         E+     D     +  LD +++NAG+ G   P   E D   
Sbjct: 61  DEQHVQPQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGP-XSEQDPQI 119
Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
           ++ V  +NV   F   +    +++    G+++   S  G  G     AY  SK A  G  
Sbjct: 120 WQDVXQVNVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXX 179
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           + +A E     +RVNC++P    T    +  P    TED                    T
Sbjct: 180 QVLADEYQNRSLRVNCINPGGTRTSXRASAFP----TEDPQ---------------KLKT 220
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             D+    L+L  D++R  +G       G
Sbjct: 221 PADIXPLYLWLXGDDSRRKTGXTFDAQPG 249

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 41/278 (14%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           A++TG A  IG +     H+ G +V I     A+   +L  ++ +          C  D+
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN--TAVVCQADL 83
Query: 76  TKEEDVCSAVDLTVEK----FGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVKG 130
           T    + ++ +  +      FG  D++VNNA  +  P P ++ + + +   K  +  V  
Sbjct: 84  TNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVAE 142
Query: 131 VFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHAV 175
           +  G    A  ++  +     KGT          I+++C        +    Y   KHA+
Sbjct: 143 LI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHAL 201
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           +GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   +  
Sbjct: 202 VGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLGR 249
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
            E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 250 REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 287

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R AL+TGGA+G+G +        G +V + D++            GE D  +   DVT+E
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----------GE-DLIYVEGDVTRE 51
Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD--LSEFEKVFDINVKGVFHGMK 136
           EDV  AV    E+   L  +V+ AG+  A     +E    L  F +V ++N+ G F+ ++
Sbjct: 52  EDVRRAVARAQEE-APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 110
Query: 137 HAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            AA  M          +G I++  SVA   G +G  AY  SK  V+ L    A EL  +G
Sbjct: 111 LAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWG 170
Query: 191 IRVNCVSPYAVATGLALAHLPEEER 215
           IRV  V+P    T L L  LPE+ +
Sbjct: 171 IRVVTVAPGLFDTPL-LQGLPEKAK 194

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 116/273 (42%), Gaps = 45/273 (16%)
Query: 16  LVGRVALITGGATGIGESTVRLF---------HKHGAKVC-----IADVQDNLGQQVCQS 61
           L  +V +I GG   +G  T + F         H H AK       + D  ++ G +V   
Sbjct: 9   LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVA-- 66
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEF 120
                       D++ EE+V    D   ++FG +DI +N  G +   P  +  EA   EF
Sbjct: 67  --------LYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEA---EF 115
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC-SVAGAIGGLGPHAYTGSKHAVLGLN 179
           + +  IN K  +  +K AA+ M P   G II+I  S+  A  G     Y G+K  V    
Sbjct: 116 DAMDTINNKVAYFFIKQAAKHMNPN--GHIITIATSLLAAYTGFYS-TYAGNKAPVEHYT 172
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           +  + EL K  I VN ++P  + T        +E +   A           +   G +LT
Sbjct: 173 RAASKELMKQQISVNAIAPGPMDTSFFYG---QETKESTAF--------HKSQAMGNQLT 221
Query: 240 A-NDVANAVLFLASDEARYISGTNLMVDGGFTS 271
              D+A  + FL +D   +I+G  +  +GG+T+
Sbjct: 222 KIEDIAPIIKFLTTD-GWWINGQTIFANGGYTT 253

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 18/280 (6%)
Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHG---AKVCIADVQDNLGQQVCQ 60
           S+ +    A +RL  +  LITG + GIG++T   + +      K+ +A  +    +++ +
Sbjct: 19  SHMSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKK 78
Query: 61  SLGGEPDTFFCHC---DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL 117
           ++  E      H    D+T+ E +   ++   ++F  +DI+VNNAG        + +   
Sbjct: 79  TIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG-KALGSDRVGQIAT 137
Query: 118 SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG 177
            + + VFD NV  + +  +    I   +  G I+++ S+AG         Y  SK AV  
Sbjct: 138 EDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGA 197
Query: 178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
              ++  EL    IRV  ++P  V T  +L      E             A+N     T 
Sbjct: 198 FTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQ-----------AKNVYKDTTP 246
Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLR 277
           L A+DVA+ +++  S +   +    L+      S +H  R
Sbjct: 247 LMADDVADLIVYATSRKQNTVIADTLIFPTNQASPHHIFR 286

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           ++A++TG  +G+G +        G  V +A  + +  Q+    +G   D      DVT  
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGD--DALCVPTDVTDP 86
Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           + V +    TVEKFG +D++ NNAG +GAP     +   +++++V D N+ G F   + A
Sbjct: 87  DSVRALFTATVEKFGRVDVLFNNAG-TGAPAIPXEDLTFAQWKQVVDTNLTGPFLCTQEA 145
Query: 139 ARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
            R+   Q    G II+  S++          YT +KHA+ GL K+ +
Sbjct: 146 FRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTS 192

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 20/246 (8%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFCHC 73
           G+V ++TG + GIG        K GA V I     D    + Q+  QSLGG+     C  
Sbjct: 5   GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEA-QSLGGQCVPVVC-- 61
Query: 74  DVTKEEDVCSAVD-LTVEKFGTLDIMVNNAGISGAPCPDIR-----EADLSEFEKVFDIN 127
           D ++E +V S  + +  E+ G LD++VNNA        + R     E   S ++ + ++ 
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           ++G +    + AR+M+P  +G I+ I S  G++  +    Y   K A   L  + A EL 
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISS-PGSLQYMFNVPYGVGKAACDKLAADCAHELR 180
Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           ++G+    + P  V T L   H+ +EE  +D +   + F +  ++ + TEL+       V
Sbjct: 181 RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPV--LKQFKSAFSSAETTELS----GKCV 234
Query: 248 LFLASD 253
           + LA+D
Sbjct: 235 VALATD 240

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 31/272 (11%)
Query: 6   STDSSPAV---QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVC 59
           + DS+P     + L G+VA++TG A GIG +   +F + GA V   DV    ++L ++V 
Sbjct: 198 AADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDL-KRVA 256
Query: 60  QSLGGEPDTFFCHCDVTKEEDVCS-AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS 118
             +GG   T     DVT ++ V      +T    G +DI+VNNAGI+      +   D  
Sbjct: 257 DKVGGTALTL----DVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKL--LANMDEK 310
Query: 119 EFEKVFDINV---KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
            ++ V  +N+   + +  G+     I      G +I + S+AG  G  G   Y  +K  +
Sbjct: 311 RWDAVIAVNLLAPQRLTEGLVGNGTI---GEGGRVIGLSSMAGIAGNRGQTNYATTKAGM 367
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           +GL + +A  L   GI +N V+P  + T +  A +P   R     VG R     N+  QG
Sbjct: 368 IGLAEALAPVLADKGITINAVAPGFIETKMTEA-IPLATRE----VGRR----LNSLFQG 418
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDG 267
            +    DVA  + + AS  +  ++G  + V G
Sbjct: 419 GQPV--DVAELIAYFASPASNAVTGNTIRVCG 448

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI------ADVQDNLGQQVCQSLGGEPDTFFCH 72
           R  L+TG + GIG +  R     G  + +      A  Q+ L   V     G   +F   
Sbjct: 27  RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSF--- 83
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGV 131
            DV   E     ++  + + G    +V+NAGI+  A  P +   D   ++ V   N+   
Sbjct: 84  -DVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDD---WDAVIHTNLDSF 139
Query: 132 FHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           ++ ++     MI  +  G II++ SV+G +G  G   Y+ +K  ++G  K +A EL K  
Sbjct: 140 YNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRK 199
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           I VNC++P  + TG+        E  E A+    + +      Q     A +VA    +L
Sbjct: 200 ITVNCIAPGLIDTGMI-------EMEESALKEAMSMIPMKRMGQ-----AEEVAGLASYL 247
Query: 251 ASDEARYISGTNLMVDGGF 269
            SD A Y++   + ++GG 
Sbjct: 248 MSDIAGYVTRQVISINGGM 266

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 6/209 (2%)
Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----QSLGGE 65
            P    L  R+ L+TG + GIG      + ++GA V +    +   +QV     +  G +
Sbjct: 4   QPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQ 63
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
           P  F         E+           +  LD +++NAG+ G  CP + E +   ++ V  
Sbjct: 64  PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-MSEQNPQVWQDVMQ 122
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           +NV   F   +    +++    G+++   S  G  G     AY  SK A  G+ + +A E
Sbjct: 123 VNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADE 182
Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEE 214
             +  +RVNC++P    T +  +  P E+
Sbjct: 183 YQQR-LRVNCINPGGTRTAMRASAFPTED 210

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 43/279 (15%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           A++TG A  IG +     H+ G +V I     +   +   SL  E +    +  V  + D
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVI---HYHNSAEAAVSLADELNKERSNTAVVXQAD 82
Query: 81  VCSA----------VDLTVEKFGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVK 129
           + ++          ++     FG  D++VNNA  +  P P ++ + + +   K  +  V 
Sbjct: 83  LTNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVA 141
Query: 130 GVFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHA 174
            +  G    A  ++  +     KGT          I+++C        +    Y   KHA
Sbjct: 142 ELI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHA 200
Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           ++GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   + 
Sbjct: 201 LVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLG 248
Query: 235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
             E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 249 RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 287

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 43/279 (15%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           A++TG A  IG +     H+ G +V I     +   +   SL  E +    +  V  + D
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVI---HYHNSAEAAVSLADELNKERSNTAVVXQAD 62
Query: 81  VCSA----------VDLTVEKFGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVK 129
           + ++          ++     FG  D++VNNA  +  P P ++ + + +   K  +  V 
Sbjct: 63  LTNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVA 121
Query: 130 GVFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHA 174
            +  G    A  ++  +     KGT          I+++C        +    Y   KHA
Sbjct: 122 ELI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHA 180
Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           ++GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   + 
Sbjct: 181 LVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLG 228
Query: 235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
             E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 229 RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 267

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 13/233 (5%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE 79
           + L+TG   G GE   R F + G KV     +    Q++   LG   + +    DV    
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGD--NLYIAQLDVRNRA 59
Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA 139
            +   +     ++  +DI+VNNAG++    P   +A + ++E + D N KG+ +  +   
Sbjct: 60  AIEEMLASLPAEWCNIDILVNNAGLALGMEP-AHKASVEDWETMIDTNNKGLVYMTRAVL 118
Query: 140 RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPY 199
             M+ +  G II+I S AG+    G + Y  +K  V   + N+  +L    +RV  + P 
Sbjct: 119 PGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPG 178
Query: 200 AVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            V  G   +++  +     A   ++N VA         LT  DV+ AV ++++
Sbjct: 179 LVG-GTEFSNVRFKGDDGKAEKTYQNTVA---------LTPEDVSEAVWWVST 221

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 43/279 (15%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           A++TG A  IG +     H+ G +V I     +   +   SL  E +    +  V  + D
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVI---HYHNSAEAAVSLADELNKERSNTAVVXQAD 62
Query: 81  VCSA----------VDLTVEKFGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVK 129
           + ++          ++     FG  D++VNNA  +  P P ++ + + +   K  +  V 
Sbjct: 63  LTNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVA 121
Query: 130 GVFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHA 174
            +  G    A  ++  +     KGT          I+++C        +    Y   KHA
Sbjct: 122 ELI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 180
Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           ++GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   + 
Sbjct: 181 LVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLG 228
Query: 235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
             E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 229 RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 267

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 25/265 (9%)
Query: 16  LVGRVALITG--GATGIGESTVRLFHKHGAKVCIADVQDNLG-----QQVCQSLGGEPDT 68
           L G+V ++TG  G  G+G    R   + GA V I       G     +++ ++ G +   
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
           + C  D    E     V   V  FG +D  + NAG +      I +  +  +  V  +++
Sbjct: 78  YKCQVD--SYESCEKLVKDVVADFGQIDAFIANAGATADS--GILDGSVEAWNHVVQVDL 133
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAEL 186
            G FH  K        +  G+++   S++G I        +Y  +K   + + +++A E 
Sbjct: 134 NGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEW 193
Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
             +  RVN +SP  + TGL+     E ++   +M+             G +  A ++  A
Sbjct: 194 RDFA-RVNSISPGYIDTGLSDFVPKETQQLWHSMIPM-----------GRDGLAKELKGA 241
Query: 247 VLFLASDEARYISGTNLMVDGGFTS 271
            ++ ASD + Y +G +L++DGG+T+
Sbjct: 242 YVYFASDASTYTTGADLLIDGGYTT 266

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 25/263 (9%)
Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----QSLGGE 65
            P    L  R+ L+TG + GIG      + ++GA V +    +   +QV     +  G +
Sbjct: 25  QPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQ 84
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
           P  F         E+        V  +  LD +++NAG+ G  CP   E +   ++ V  
Sbjct: 85  PQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCP-XSEQNPQVWQDVXQ 143
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           INV   F   +    +++    G+++   S  G  G     AY  SK A  G  + +A E
Sbjct: 144 INVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADE 203
Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
             +  +RVNC++P    T    +  P    TED                    T  D+  
Sbjct: 204 YQQR-LRVNCINPGGTRTAXRASAFP----TEDPQ---------------KLKTPADIXP 243
Query: 246 AVLFLASDEARYISGTNLMVDGG 268
             L+L  D++R  +G       G
Sbjct: 244 LYLWLXGDDSRRKTGXTFDAQPG 266

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 43/279 (15%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           A++TG A  IG +     H+ G +V I     +   +   SL  E +    +  V  + D
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVI---HYHNSAEAAVSLADELNKERSNTAVVXQAD 82
Query: 81  VCSA----------VDLTVEKFGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVK 129
           + ++          ++     FG  D++VNNA  +  P P ++ + + +   K  +  V 
Sbjct: 83  LTNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVA 141
Query: 130 GVFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHA 174
            +  G    A  ++  +     KGT          I+++C        +    Y   KHA
Sbjct: 142 ELI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 200
Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           ++GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   + 
Sbjct: 201 LVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLG 248
Query: 235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
             E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 249 RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 287

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL---------GQQVCQSLGGE 65
           R  GRV L+TG   G+G +    F + GA V + D+  +            +V + +   
Sbjct: 27  RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 86
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKV 123
                 + D  +E +    V   ++ FG +D++VNNAGI      D   A +S+  ++ +
Sbjct: 87  GGKAVANYDSVEEGE--KVVKTALDAFGRIDVVVNNAGI----LRDRSFARISDEDWDII 140
Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
             ++++G F   + A   M  Q  G II   S +G  G  G   Y+ +K  +LGL  ++A
Sbjct: 141 HRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLA 200
Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEE 213
            E  K  I  N ++P A  + +    +PE+
Sbjct: 201 IEGRKSNIHCNTIAPNA-GSRMTQTVMPED 229

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 6/209 (2%)
Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----QSLGGE 65
            P    L  R+ L+TG + GIG      + ++GA V +    +   +QV     +  G +
Sbjct: 4   QPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQ 63
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
           P  F         E+           +  LD +++NAG+ G  CP   E +   ++ V  
Sbjct: 64  PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-XSEQNPQVWQDVXQ 122
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           +NV   F   +    +++    G+++   S  G  G     AY  SK A  G  + +A E
Sbjct: 123 VNVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADE 182
Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEE 214
             +  +RVNC++P    T +  +  P E+
Sbjct: 183 YQQR-LRVNCINPGGTRTAMRASAFPTED 210

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 25/263 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQV--CQSLGGEPDTFFC 71
           L G+VAL+TG + GIG +  +     GA V I   + ++   + V   QS GG   +   
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 72  HCD-VTKEEDVCSAVDLTVE-KFGT--LDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
           + + +   E + S++D  ++ + G+   DI++NNAGI   P   I E     F++   +N
Sbjct: 65  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI--GPGAFIEETTEQFFDRXVSVN 122
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
            K  F  ++ A   +   ++  II+I S A  I      AY+ +K A+      +A +LG
Sbjct: 123 AKAPFFIIQQALSRLRDNSR--IINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQLG 180
Query: 188 KYGIRVNCVSPYAVAT--GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
             GI VN + P  V T     L   P  ++    +  F        N  G      D+A+
Sbjct: 181 ARGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAF--------NRLG---EVEDIAD 229
Query: 246 AVLFLASDEARYISGTNLMVDGG 268
              FLAS ++R+++G  + V GG
Sbjct: 230 TAAFLASPDSRWVTGQLIDVSGG 252

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 17/256 (6%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFCHC 73
           G+VA ITGG TG+G+    L    GA+  IA    DV     +Q+    G +       C
Sbjct: 26  GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAI--QC 83
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV-F 132
           DV   + V + V   ++  G  +I++NNA  +G           + ++ + DI + G  F
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNA--AGNFISPTERLSPNAWKTITDIVLNGTAF 141
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             ++   +++  Q     +SI ++    G         +K  V  ++K++AAE GKYG+R
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 201
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            N + P  + T  A + L      E  M+G R    R         T  ++AN   FL S
Sbjct: 202 FNVIQPGPIKTKGAFSRLDPTGTFEKEMIG-RIPCGRLG-------TVEELANLAAFLCS 253
Query: 253 DEARYISGTNLMVDGG 268
           D A +I+G  +  DGG
Sbjct: 254 DYASWINGAVIKFDGG 269

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 118/297 (39%), Gaps = 66/297 (22%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI----------------------------ADVQ 51
           VAL+TG A  +G S     H  G  VC+                            AD+ 
Sbjct: 8   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 67
Query: 52  DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI------- 104
           +     V  + G  P T F  C           V      +G  D++VNNA         
Sbjct: 68  NVATAPVSGADGSAPVTLFTRC--------AELVAACYTHWGRCDVLVNNASSFYPTPLL 119
Query: 105 -----SGAPCPDIREADLSEFEKVFDINVKGVFHGMK---HAARIMIPQTKGTIISICSV 156
                   PC   REA  +    +F  N    +  +K   H       + +GT  SI ++
Sbjct: 120 RNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM 179
Query: 157 AGAIGG---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
             A+     LG   YT +K A+ GL ++ A EL    IRVN V P     GL++     +
Sbjct: 180 VDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-----GLSVL---VD 231
Query: 214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           +       G R+ V     +   + +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 232 DMPPAVWEGHRSKVP----LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 284

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 118/297 (39%), Gaps = 66/297 (22%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI----------------------------ADVQ 51
           VAL+TG A  +G S     H  G  VC+                            AD+ 
Sbjct: 27  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 86
Query: 52  DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI------- 104
           +     V  + G  P T F  C           V      +G  D++VNNA         
Sbjct: 87  NVATAPVSGADGSAPVTLFTRC--------AELVAACYTHWGRCDVLVNNASSFYPTPLL 138
Query: 105 -----SGAPCPDIREADLSEFEKVFDINVKGVFHGMK---HAARIMIPQTKGTIISICSV 156
                   PC   REA  +    +F  N    +  +K   H       + +GT  SI ++
Sbjct: 139 RNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM 198
Query: 157 AGAIGG---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
             A+     LG   YT +K A+ GL ++ A EL    IRVN V P     GL++     +
Sbjct: 199 VDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-----GLSVL---VD 250
Query: 214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           +       G R+ V     +   + +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 251 DMPPAVWEGHRSKVP----LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 303

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 118/297 (39%), Gaps = 66/297 (22%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI----------------------------ADVQ 51
           VAL+TG A  +G S     H  G  VC+                            AD+ 
Sbjct: 11  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 70
Query: 52  DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI------- 104
           +     V  + G  P T F  C           V      +G  D++VNNA         
Sbjct: 71  NVATAPVSGADGSAPVTLFTRC--------AELVAACYTHWGRCDVLVNNASSFYPTPLL 122
Query: 105 -----SGAPCPDIREADLSEFEKVFDINVKGVFHGMK---HAARIMIPQTKGTIISICSV 156
                   PC   REA  +    +F  N    +  +K   H       + +GT  SI ++
Sbjct: 123 RNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM 182
Query: 157 AGAIGG---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
             A+     LG   YT +K A+ GL ++ A EL    IRVN V P     GL++     +
Sbjct: 183 VDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-----GLSVL---VD 234
Query: 214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           +       G R+ V     +   + +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 235 DMPPAVWEGHRSKVP----LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 118/297 (39%), Gaps = 66/297 (22%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI----------------------------ADVQ 51
           VAL+TG A  +G S     H  G  VC+                            AD+ 
Sbjct: 48  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 107
Query: 52  DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI------- 104
           +     V  + G  P T F  C           V      +G  D++VNNA         
Sbjct: 108 NVATAPVSGADGSAPVTLFTRC--------AELVAACYTHWGRCDVLVNNASSFYPTPLL 159
Query: 105 -----SGAPCPDIREADLSEFEKVFDINVKGVFHGMK---HAARIMIPQTKGTIISICSV 156
                   PC   REA  +    +F  N    +  +K   H       + +GT  SI ++
Sbjct: 160 RNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM 219
Query: 157 AGAIGG---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
             A+     LG   YT +K A+ GL ++ A EL    IRVN V P     GL++     +
Sbjct: 220 VDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-----GLSVL---VD 271
Query: 214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           +       G R+ V     +   + +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 272 DMPPAVWEGHRSKVP----LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 17/264 (6%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFF--C 71
           +L G+ AL+TG   GIG++        GA V I    ++N+ + + +     PD      
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKG 130
             D+  E+  C  V   +EK+  +DI++NN GI       DI + D   + K+F++N+  
Sbjct: 67  VADLGTEQG-CQDV---IEKYPKVDILINNLGIFEPVEYFDIPDED---WFKLFEVNIXS 119
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
                +   +  I + +G +I I S A          Y+ +K   L L++++A       
Sbjct: 120 GVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTN 179
Query: 191 IRVNCVSP-----YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
           + VN + P       V T L   +  E+   E+A   F     R  ++    +   ++A+
Sbjct: 180 VTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXK-ENRPTSIIQRLIRPEEIAH 238
Query: 246 AVLFLASDEARYISGTNLMVDGGF 269
            V FL+S  +  I+G+ L +DGG 
Sbjct: 239 LVTFLSSPLSSAINGSALRIDGGL 262

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 27/202 (13%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL---------GQQVCQSLGGE 65
           R  GRV L+TG   G+G +    F + GA V + D+  +            +V + +   
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65
Query: 66  PDTFFCHCDVTK--EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS----- 118
                 + D  +  E+ V +A+D     FG +D++VNNAGI       +R+   S     
Sbjct: 66  GGKAVANYDSVEAGEKLVKTALDT----FGRIDVVVNNAGI-------LRDRSFSRISDE 114
Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           +++ +  ++++G F   + A      Q  G II   S +G  G  G   Y+ +K  +LGL
Sbjct: 115 DWDIIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGL 174
Query: 179 NKNVAAELGKYGIRVNCVSPYA 200
              +  E  K  I  N ++P A
Sbjct: 175 ANTLVIEGRKNNIHCNTIAPNA 196

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 92  FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTII 151
            G LDI+VNNAG+       I E   +++     +NV+  F   + A  +      G I+
Sbjct: 92  LGRLDIVVNNAGVISRG--RITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIV 149
Query: 152 SICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP 211
           ++ S  G   G G   Y  +K A+  L +    +    GIR+N V P  V T        
Sbjct: 150 NVASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFA 209
Query: 212 EEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
           +     D  V     + R   + G      D+A+ VLFLASD ARY+ G+ + V+GG
Sbjct: 210 KRGFDPDRAVAE---LGRTVPL-GRIAEPEDIADVVLFLASDAARYLCGSLVEVNGG 262

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 116/297 (39%), Gaps = 66/297 (22%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI----------------------------ADVQ 51
           VAL+TG A  +G       H  G  VC+                            AD+ 
Sbjct: 8   VALVTGAAKRLGSGIAEGLHAEGYAVCLHYHRSAAEANTLAATLNARRPNSAIPVQADLS 67
Query: 52  DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI------- 104
           +        + G  P T F  C      D+ +A       +G  D++VNNA         
Sbjct: 68  NVAKAPAGGADGAAPVTLFKRC-----ADLVAAC---YTHWGRCDVLVNNASSFYPTPLL 119
Query: 105 -----SGAPCPDIREADLSEFEKVFDINVKGVFHGMK---HAARIMIPQTKGTIISICSV 156
                   PC   REA  +    +F  N    +  +K   H       + +GT  SI ++
Sbjct: 120 RKDEDGHVPCVGDREAMEAAAADLFGSNAMAPYFLIKAFAHRVADTPAEQRGTNYSIVNM 179
Query: 157 AGAIGG---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
             A+     LG   YT +K A+ GL ++ A EL    IRVN V P     GL++      
Sbjct: 180 VDAMTSQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-----GLSVL----- 229
Query: 214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
              +D     R        +   + +A +V++ V+FL S +A+Y++GT + VDGG++
Sbjct: 230 --ADDMPPAVREDYRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYVTGTCVKVDGGYS 284

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLGQQVCQSLGGEPDTFFC-HCDVT 76
           +V L+TG ++G G +        G  V   A   + L   V       PD       DVT
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----PDRAEAISLDVT 61
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             E +       + ++G +D++VNNAG +        E    E   +F+++V     G  
Sbjct: 62  DGERIDVVAADVLARYGRVDVLVNNAGRTQVGA--FEETTERELRDLFELHV----FGPA 115
Query: 137 HAARIMIPQTK----GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              R ++PQ +    G++++I S  G +   G  AY+ +K A+  L++ +A E+  +GI+
Sbjct: 116 RLTRALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIK 175
Query: 193 VNCVSPYAVATGL---ALAHLPEE 213
           V  V P A  T L     A+  EE
Sbjct: 176 VLIVEPGAFRTNLFGKGAAYFSEE 199

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFCHC 73
           G+VA ITGG TG+G+    L    GA+  IA    DV     +Q+    G +       C
Sbjct: 26  GKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQTGNKVHAI--QC 83
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV-F 132
           DV   + V + V   ++  G  +I++NNA  +G           + ++ + DI + G  F
Sbjct: 84  DVRDPDXVQNTVSELIKVAGHPNIVINNA--AGNFISPTERLSPNAWKTITDIVLNGTAF 141
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             ++   +++  Q     +SI ++    G         +K  V   +K++AAE GKYG R
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAAEWGKYGXR 201
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            N + P  + T  A + L      E   +G R    R         T  ++AN   FL S
Sbjct: 202 FNVIQPGPIKTKGAFSRLDPTGTFEKEXIG-RIPCGRLG-------TVEELANLAAFLCS 253
Query: 253 DEARYISGTNLMVDGG 268
           D A +I+G  +  DGG
Sbjct: 254 DYASWINGAVIKFDGG 269

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 24/264 (9%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKV--CIADVQDNLGQQ--VCQSLGGEPDTFFCHCDV 75
           VA++TGG++GIG +TV L  + GA V  C  D +     +  + Q   G    F   CDV
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGA-RLFASVCDV 68
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF----EKVFDINVKGV 131
                V +  +      G   I+VNNAG          +  +S F    ++ +   ++  
Sbjct: 69  LDALQVRAFAEACERTLGCASILVNNAG----------QGRVSTFAETTDEAWSEELQLK 118
Query: 132 FHGMKHAARIMIPQ--TKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELG 187
           F  + H  R  +PQ  ++     +C  +       PH  A + ++  V  L +++A E  
Sbjct: 119 FFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFA 178
Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANA 246
             G+RVN +    V +G         E  E     +   +ARN  +    L    + A A
Sbjct: 179 PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARA 238
Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
           +LFLAS  + Y +G+++ V GG +
Sbjct: 239 ILFLASPLSAYTTGSHIDVSGGLS 262

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLGQ---QVCQSLGGEPDTFFCHCDV 75
           +A+ITG + GIG          G +V  IA  + NL +   ++ +S     +      D+
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDI 68
Query: 76  TKEEDVCSAVDLTV----EKFGTLDIMVNNAGISGAPCPDIREADLSE----FEKVFDIN 127
           T     C+  D  +    +K+G +DI+VN A           +  LSE    F K+ +IN
Sbjct: 69  TD----CTKADTEIKDIHQKYGAVDILVNAAAX-------FXDGSLSEPVDNFRKIXEIN 117
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           V   +  +K    I   Q  G I ++ S A   G      Y  +K A+LGL +++  EL 
Sbjct: 118 VIAQYGILKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELA 177
Query: 188 KYGIRVNCVSPYAVATGLA 206
             GIRV  + P  V T  A
Sbjct: 178 PLGIRVTTLCPGWVNTDXA 196

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF--CHCDV 75
           GR+AL+TGG TG+G    +     G  V I   + ++       +GG          CDV
Sbjct: 33  GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDV 92
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              + V +       +F  LD++VNNAG +  P P + E    ++  +   N+ G F   
Sbjct: 93  GDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVP-LEEVTFEQWNGIVAANLTGAFLCT 151
Query: 136 KHAARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
           +HA R    QT   G II+  S++          YT +KHA+ GL K+ A
Sbjct: 152 QHAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTA 201

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +VA+ITG + GIGE+  R   + G  + +     D  + +  ++ Q  G E   F+ H D
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE--VFYHHLD 60
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI 104
           V+K E V       +E+FG +D++V NAG+
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAGL 90

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +VA+ITG + GIGE+  R   + G  + +     D  + +  ++ Q  G E   F+ H D
Sbjct: 25  KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE--VFYHHLD 82
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI 104
           V+K E V       +E+FG +D++V NAG+
Sbjct: 83  VSKAESVEEFSKKVLERFGDVDVVVANAGL 112

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 31/217 (14%)
Query: 20  VALITGGATGIGESTVRLF------HKHGAKVCI------ADVQDNLGQQVCQSLGGEPD 67
           + LITG   GIG +    F      H     V +      AD++    +  C++ G   D
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLE--CRAEGALTD 61
Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFD 125
           T     D++   DV       VE++G +D +VNNAG+   GA   D+ E D   F+   +
Sbjct: 62  TI--TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA-LSDLTEED---FDYTMN 115
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
            N+KG F   +    +M  Q  G I  I SVA          Y  SK    GL + +   
Sbjct: 116 TNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLY 175
Query: 186 LGKYGIRVNCVSPYAVATGL---------ALAHLPEE 213
             K  +R+  V P AV T +         AL  +PE+
Sbjct: 176 ARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPED 212

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 116/273 (42%), Gaps = 46/273 (16%)
Query: 23  ITGGATGIGESTVRLFHKHGAKVC-----IADVQDNL----GQQ-----VCQSLGGEPDT 68
           ITG A+GIG +   L  + G  V       AD++ +L    G++     V    GG  D 
Sbjct: 6   ITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDG 65
Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
             C          C+ V +T    G L + VN  G+S A    + EA LS  ++   + V
Sbjct: 66  LVC----------CAGVGVTAANSG-LVVAVNYFGVS-ALLDGLAEA-LSRGQQPAAVIV 112
Query: 129 KGVFHGMKHAARI-----MIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNV 182
             +      AA +     M+   +   I +    G       H AY GSK+AV  L +  
Sbjct: 113 GSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQT-----HLAYAGSKYAVTCLARRN 167
Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
             +    G+R+N V+P AV T L  A   +    E      R FVA     +G+E    +
Sbjct: 168 VVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGEST----RRFVAPLG--RGSE--PRE 219
Query: 243 VANAVLFLASDEARYISGTNLMVDGGFTSVNHS 275
           VA A+ FL   +A +I G+ L VDGG  ++  +
Sbjct: 220 VAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 108/261 (41%), Gaps = 21/261 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           L G+ ALIT G  G G +TV LF + GA+V   A  +            G P+  F   D
Sbjct: 9   LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------GLPEELFVEAD 58
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +T +E      + T ++ G +D++V+  G S A           ++     +N+      
Sbjct: 59  LTTKEGCAIVAEATRQRLGGVDVIVHXLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRL 118
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN---KNVAAELGKYGI 191
            +      + +  G ++ + S+   +    P + T    A   L+   K  + E+   G+
Sbjct: 119 DRQLVPDXVARGSGVVVHVTSIQRVLPL--PESTTAYAAAKAALSTYSKAXSKEVSPKGV 176
Query: 192 RVNCVSPYAVAT--GLALAHLPEEERTEDAMVGFRNFVARNAN--MQGTELTANDVANAV 247
           RV  VSP  + T   + LA    ++   D + G +  +         G      +VAN +
Sbjct: 177 RVVRVSPGWIETEASVRLAERLAKQAGTD-LEGGKKIIXDGLGGIPLGRPAKPEEVANLI 235
Query: 248 LFLASDEARYISGTNLMVDGG 268
            FLASD A  I+G    +DGG
Sbjct: 236 AFLASDRAASITGAEYTIDGG 256

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 120/264 (45%), Gaps = 26/264 (9%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQ--SLGGEPDTFFCHCD 74
           G++A++T G++G+G ++     ++GA++ + +  ++ L     +  SL           D
Sbjct: 7   GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGD 66
Query: 75  VTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCP-DIREADLSEFEKVFDINVKG 130
           + +  D+    D   EK    G  DI+V +   +G P P    E  + ++++ + +  + 
Sbjct: 67  IREPGDI----DRLFEKARDLGGADILVYS---TGGPRPGRFMELGVEDWDESYRLLARS 119
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG----SKHAVLGLNKNVAAEL 186
                + AA  M+ +  G ++ I    G++  L P          +  V+G+ + +A EL
Sbjct: 120 AVWVGRRAAEQMVEKGWGRMVYI----GSVTLLRPWQDLALSNIMRLPVIGVVRTLALEL 175
Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMV--GFRNFVARNANMQGTELTANDVA 244
             +G+ VN V P  + T    +   E  R     V    ++  +R     G      ++A
Sbjct: 176 APHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIP--MGRVGKPEELA 233
Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           + V FLAS++A +I+G  + VDGG
Sbjct: 234 SVVAFLASEKASFITGAVIPVDGG 257

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF 226
           AY GSK+A+    +  AA  G+ G+R+N ++P A  T L  A L ++ R  +++  F   
Sbjct: 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL-QDPRYGESIAKFVPP 212
Query: 227 VARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
           + R A         +++A+ + FL S  A Y+ G  +++DGG  +V
Sbjct: 213 MGRRAE-------PSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV 251

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 25/263 (9%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-H 72
           L G+  LI G A    I     +     GA++     Q    ++  + L  E   F C H
Sbjct: 12  LYGKRGLILGLANNRSIAWGIAKTASSAGAELAFT-YQGEAXKKRVEPLAEEVKGFVCGH 70
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKG 130
           CDV+    + +  +   +K+G LD +V+  G S       R  D+SE  F    +I+V  
Sbjct: 71  CDVSDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNISVYS 130
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
           +    K A ++      G+I+++ +  GA   +  +   G   A L  + K +A +LG  
Sbjct: 131 LTALTKRAEKLX--SDGGSILTL-TYYGAEKVVPNYNVXGVAKAALEASVKYLAVDLGPK 187
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR---NANMQGTELTANDVANA 246
            IRVN +S   + T LA + + +          FR  +     NA ++ T +T  +V ++
Sbjct: 188 HIRVNAISAGPIKT-LAASGIGD----------FRYILKWNEYNAPLRRT-VTIEEVGDS 235
Query: 247 VLFLASDEARYISGTNLMVDGGF 269
            L+L SD +R ++G    VD G+
Sbjct: 236 ALYLLSDLSRSVTGEVHHVDSGY 258

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 35/209 (16%)
Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----------Q 60
           P   RL G    ITG + GIG++      K GA + IA        ++           +
Sbjct: 38  PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE 97
Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           ++GG+     C  DV  E+ + +AV+  ++KFG +DI+VNNA  S     +  +      
Sbjct: 98  AVGGK--ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNA--SAISLTNTLDTPTKRL 153
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIIS-ICSVAGAIGGLGP-----H-AYTGSKH 173
           + + ++N +G +     A++  IP  K + ++ I +++  +  L P     H AYT +K+
Sbjct: 154 DLMMNVNTRGTY----LASKACIPYLKKSKVAHILNISPPL-NLNPVWFKQHCAYTIAKY 208
Query: 174 A----VLGLNKNVAAELGKYGIRVNCVSP 198
                VLG+ +    E     I VN + P
Sbjct: 209 GMSMYVLGMAEEFKGE-----IAVNALWP 232

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 16/208 (7%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----------GGE 65
           L G+   ITG + GIG +      + GA V IA        ++  ++          GG+
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
                  CD+ +E+ V +AV  TV+ FG +DI+VNNA  S        +     F+    
Sbjct: 64  --GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNA--SAIWLRGTLDTPXKRFDLXQQ 119
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPH-AYTGSKHAVLGLNKNVA 183
           +N +G F   +     ++      I+++           G H  YT +K     +   +A
Sbjct: 120 VNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLA 179
Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLP 211
           AE G  G+ +N + P  V    A+  LP
Sbjct: 180 AEFGPQGVAINALWPRTVIATDAINXLP 207

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 20  VALITGGATGIGESTVR-LFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTK 77
           VAL+TGG  GIG + VR L       V +       GQ   Q L  E     F   D+  
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            + + +  D   +++G LD++VNNAGI+       + AD + F    ++ +K  F G + 
Sbjct: 66  LQSIRALRDFLRKEYGGLDVLVNNAGIA------FKVADPTPFHIQAEVTMKTNFFGTRD 119
Query: 138 AARIMIP--QTKGTIISICSV 156
               ++P  + +G ++++ S+
Sbjct: 120 VXTELLPLIKPQGRVVNVSSI 140

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 37/268 (13%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN----LGQQV------CQSLGGE 65
           L GR AL+TG + GIG +        GA V +  V+      + Q++       Q L G+
Sbjct: 31  LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGD 90
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
                   D+ +  +  + VD+ V         +N +    A    +   DL+ F+    
Sbjct: 91  LSEAGAGTDLIERAEAIAPVDILV---------INASAQINATLSALTPNDLA-FQ--LA 138
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH----AYTGSKHAVLGLNKN 181
           +N+      ++ A   M+ +  G ++SI    G+I  L P     AY  +K A   L ++
Sbjct: 139 VNLGSTVDMLQSALPKMVARKWGRVVSI----GSINQLRPKSVVTAYAATKAAQHNLIQS 194
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
            A +     + +N ++P     GL       + R +D   G+  +V R  N  G      
Sbjct: 195 QARDFAGDNVLLNTLAP-----GLVDTDRNADRRAQDPE-GWDEYV-RTLNWMGRAGRPE 247
Query: 242 DVANAVLFLASDEARYISGTNLMVDGGF 269
           ++  A LFLAS+   +++G  + + GG+
Sbjct: 248 EMVGAALFLASEACSFMTGETIFLTGGY 275

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 20  VALITGGATGIGESTVR-LFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTK 77
           VAL+TGG  GIG + VR L       V +       GQ   Q L  E     F   D+  
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            + + +  D   +++G LD++VNNAGI+       + AD + F    ++ +K  F G + 
Sbjct: 66  LQSIRALRDFLRKEYGGLDVLVNNAGIA------FKVADPTPFHIQAEVTMKTNFFGTRD 119
Query: 138 AARIMIP--QTKGTIISICSV 156
               ++P  + +G ++++ S+
Sbjct: 120 VCTELLPLIKPQGRVVNVSSI 140

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 17  VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG--QQVCQSLGGEPDTFFCHCD 74
           +G+V L+TG + GIG+S V +         +  V  +    +++ +  G     F+   D
Sbjct: 1   MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDR--FFYVVGD 58
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +T++  +   V+  V+  G +D +V NAG+   P  ++ E D++ ++K++DIN    F  
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVL-EPVQNVNEIDVNAWKKLYDIN----FFS 113
Query: 135 MKHAARIMIPQ---TKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
           +     I +P+   T G ++ + S A  +      AY  SK A+
Sbjct: 114 IVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAAL 157

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 21/261 (8%)
Query: 16  LVGRVALITG--GATGIGESTVRLFHKHGAKVCIADVQDNL---GQQVCQSLGGEPDTFF 70
           L G+ AL+ G      +G +      + GA+V ++   + L    +++ ++LGG      
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGG---ALL 62
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DVT++E++ +      E FG LD +V+    +     + R  D    + +  + V  
Sbjct: 63  FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSA 122
Query: 131 VFHGMKHAARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
             + +   AR   P  +  G I+++   A        +    +K A+    + +A ELG 
Sbjct: 123 --YSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGP 180
Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            G+RVN +S   V T  A        R+        + VA+ A ++   +T  +V N  L
Sbjct: 181 KGVRVNAISAGPVRTVAA--------RSIPGFTKMYDRVAQTAPLR-RNITQEEVGNLGL 231
Query: 249 FLASDEARYISGTNLMVDGGF 269
           FL S  A  I+G  + VD G+
Sbjct: 232 FLLSPLASGITGEVVYVDAGY 252

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 21/261 (8%)
Query: 16  LVGRVALITG--GATGIGESTVRLFHKHGAKVCIADVQDNL---GQQVCQSLGGEPDTFF 70
           L G+ AL+ G      +G +      + GA+V ++   + L    +++ ++LGG      
Sbjct: 6   LSGKKALVXGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGG---ALL 62
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DVT++E++ +      E FG LD +V+    +     + R  D    + +  + V  
Sbjct: 63  FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAXEGRYIDTRRQDWLLALEVSA 122
Query: 131 VFHGMKHAARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
             + +   AR   P  +  G I+++   A        +    +K A+    + +A ELG 
Sbjct: 123 --YSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVXAIAKAALEASVRYLAYELGP 180
Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            G+RVN +S   V T +A   +P   +  D        VA+ A ++   +T  +V N  L
Sbjct: 181 KGVRVNAISAGPVRT-VAARSIPGFTKXYDR-------VAQTAPLR-RNITQEEVGNLGL 231
Query: 249 FLASDEARYISGTNLMVDGGF 269
           FL S  A  I+G  + VD G+
Sbjct: 232 FLLSPLASGITGEVVYVDAGY 252

>pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase Length = 319

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 128/312 (41%), Gaps = 57/312 (18%)
Query: 16  LVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQD--NLGQQVCQSLGGEPDTFFC 71
           L G+ A + G A   G G +  +L    GA+V +       ++ ++  +S   E D+F+ 
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66
Query: 72  HCDVTK--EEDVCSAVDLTVEKFGTLDIMVNN--------------AGISGAPCPDIREA 115
               +K   E     VDL  +K   LD + +               AG+ G    ++ EA
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEA 126
Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--------- 166
             ++  ++ DI V  + +G +    ++    KG + ++ S + +   L  H         
Sbjct: 127 VRADVGQI-DILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGG 185
Query: 167 -----AYTGSKHAVLGLN--------------KNVAAELGK-YGIRVNCVS--PYAVATG 204
                +Y  S+  + G                + +A E G+   +RVNC+S  P      
Sbjct: 186 SALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAA 245
Query: 205 LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLM 264
            A+    ++   + A+    ++   NA +Q  EL ++DV  A LFL S  AR ++G  L 
Sbjct: 246 SAIGKAGDKTFIDLAI----DYSEANAPLQ-KELESDDVGRAALFLLSPLARAVTGATLY 300
Query: 265 VDGGFTSVNHSL 276
           VD G  ++  +L
Sbjct: 301 VDNGLHAMGQAL 312

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 103/257 (40%), Gaps = 17/257 (6%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGG-EPDTFFCHCDVTK 77
           VA++TGG  GIG    R     G  + I  + D  G   V   L G      F   D+  
Sbjct: 31  VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD 90
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
                + VD  V +FG +D +VNNAGI+     D  +     F+ +  +N++G     + 
Sbjct: 91  LSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQA 150
Query: 138 AARIMI---PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
             +  +    +   +II+I SV+          Y  SK  +   ++ +A  L + GI V 
Sbjct: 151 VLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRLAETGIAVF 210
Query: 195 CVSPYAVATGLALAHLPEEE-RTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
            V P  + +    A   + +   E  +V  R +               D+ N V  LA  
Sbjct: 211 EVRPGIIRSDXTAAVSGKYDGLIESGLVPXRRWG-----------EPEDIGNIVAGLAGG 259
Query: 254 EARYISGTNLMVDGGFT 270
           +  + +G+ +  DGG +
Sbjct: 260 QFGFATGSVIQADGGLS 276

>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 107/263 (40%), Gaps = 22/263 (8%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 62
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKG 130
           DV ++  + +      + +   D  V++ G +     D   +       F+   DI+   
Sbjct: 63  DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 122
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
            F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G  
Sbjct: 123 -FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 179
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVANAV 247
           G+RVN +S   + T LA + + +          FR  +A    +      +T  DV N+ 
Sbjct: 180 GVRVNAISAGPIRT-LAASGIKD----------FRKMLAHCEAVTPIRRTVTIEDVGNSA 228
Query: 248 LFLASDEARYISGTNLMVDGGFT 270
            FL SD +  ISG  + VDGGF+
Sbjct: 229 AFLCSDLSAGISGEVVHVDGGFS 251

>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 107/263 (40%), Gaps = 22/263 (8%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 66
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKG 130
           DV ++  + +      + +   D  V++ G +     D   +       F+   DI+   
Sbjct: 67  DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 126
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
            F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G  
Sbjct: 127 -FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 183
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVANAV 247
           G+RVN +S   + T LA + + +          FR  +A    +      +T  DV N+ 
Sbjct: 184 GVRVNAISAGPIRT-LAASGIKD----------FRKMLAHCEAVTPIRRTVTIEDVGNSA 232
Query: 248 LFLASDEARYISGTNLMVDGGFT 270
            FL SD +  ISG  + VDGGF+
Sbjct: 233 AFLCSDLSAGISGEVVHVDGGFS 255

>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 107/263 (40%), Gaps = 22/263 (8%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 63
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKG 130
           DV ++  + +      + +   D  V++ G +     D   +       F+   DI+   
Sbjct: 64  DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 123
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
            F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G  
Sbjct: 124 -FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 180
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVANAV 247
           G+RVN +S   + T LA + + +          FR  +A    +      +T  DV N+ 
Sbjct: 181 GVRVNAISAGPIRT-LAASGIKD----------FRKMLAHCEAVTPIRRTVTIEDVGNSA 229
Query: 248 LFLASDEARYISGTNLMVDGGFT 270
            FL SD +  ISG  + VDGGF+
Sbjct: 230 AFLCSDLSAGISGEVVHVDGGFS 252

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGE-PDTFFCHCDVT 76
           RVAL+TG   GIG + VR   +  A   +   +D   GQ   + L  E     F   D+ 
Sbjct: 5   RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDII 64
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             + + +  D   +++G LD++VNNA I+       +  + + F    ++ +K  F G +
Sbjct: 65  DLQSIRALCDFLRKEYGGLDVLVNNAAIA------FQLDNPTPFHIQAELTMKTNFMGTR 118
Query: 137 HAARIMIP--QTKGTIISICSVAG 158
           +    ++P  + +G ++++ S  G
Sbjct: 119 NVCTELLPLIKPQGRVVNVSSTEG 142

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV--CQSLGG-----EPDTFFC 71
           ++ LITG ++G G  T       G +V  A  +D +G+     +++ G     + D    
Sbjct: 6   KIILITGASSGFGRLTAEALAGAGHRVY-ASXRDIVGRNASNVEAIAGFARDNDVDLRTL 64
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNA-----GISGAPCPDIREADLSEFEKVFDI 126
             DV  +  V  A+D  + + G +D++++NA     G + A  P+       +F +++DI
Sbjct: 65  ELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTPE-------QFAELYDI 117
Query: 127 NVKGVFHGMKHAARIMIP----QTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNK 180
           NV       +   R  +P    Q  G +I I S + A GG  P+   Y  +K A   +  
Sbjct: 118 NVLST----QRVNRAALPHXRRQKHGLLIWISSSSSA-GGTPPYLAPYFAAKAAXDAIAV 172
Query: 181 NVAAELGKYGIRVNCVSPYAVATG 204
             A EL ++GI  + + P A  +G
Sbjct: 173 QYARELSRWGIETSIIVPGAFTSG 196

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 25/263 (9%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-H 72
           L G+  LI G A    I     +   + GA++      D L ++V + L  E   F   H
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV-EPLAEELGAFVAGH 87
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKG 130
           CDV     + +  +   +K+G LD +V+  G S       R  D SE  F     I+V  
Sbjct: 88  CDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYS 147
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
           +    + A ++M     G+I+++ +  GA   +  +   G   A L  + K +A +LG  
Sbjct: 148 LTAVSRRAEKLM--ADGGSILTL-TYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQ 204
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR---NANMQGTELTANDVANA 246
            IRVN +S   + T LA + + +          FR  +     NA ++ T +T ++V + 
Sbjct: 205 NIRVNAISAGPIKT-LAASGIGD----------FRYILKWNEYNAPLRRT-VTIDEVGDV 252
Query: 247 VLFLASDEARYISGTNLMVDGGF 269
            L+  SD +R ++G     D G+
Sbjct: 253 GLYFLSDLSRSVTGEVHHADSGY 275

>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 110/265 (41%), Gaps = 26/265 (9%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 63
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP----DIREADLSE-FEKVFDINV 128
           DV ++  + +      + +   D  V++  IS AP      D   A   E F+   DI+ 
Sbjct: 64  DVAEDASIDTMFAELGKVWPKFDGFVHS--ISFAPGDQLDGDYVNAVTREGFKIAHDISS 121
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELG 187
              F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G
Sbjct: 122 YS-FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG 178
Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVAN 245
             G+RVN +S   + T LA + + +          FR  +A    +      +T  DV N
Sbjct: 179 PEGVRVNAISAGPIRT-LAASGIKD----------FRKMLAHCEAVTPIRRTVTIEDVGN 227
Query: 246 AVLFLASDEARYISGTNLMVDGGFT 270
           +  FL SD +  ISG  + VDGGF+
Sbjct: 228 SAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 29/195 (14%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +    +   Q+V   C  LG       
Sbjct: 5   EMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAAS---- 60
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEF------- 120
            H      ED+  A    V+     G LD+++ N          I +  LS F       
Sbjct: 61  AHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILN---------HITQTSLSLFHDDIHSV 111
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
            +V ++N    +  M  AA  M+ Q+ G+I  I S+AG +       Y+ SK A+ G   
Sbjct: 112 RRVMEVNFLS-YVVMSTAALPMLKQSNGSIAVISSLAGKVTYPMVAPYSASKFALDGFFS 170
Query: 181 NVAAELGKYGIRVNC 195
            +  EL  Y  +VN 
Sbjct: 171 TIRTEL--YITKVNV 183

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 15/188 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +    +   Q+V   C  LG       
Sbjct: 14  EMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAAS---- 69
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A    V+     G LD+++ N  I+        + D+    +V ++N
Sbjct: 70  AHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILN-HITQTSLSLFHD-DIHSVRRVMEVN 127
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  M  AA  M+ Q+ G+I  I S+AG +       Y+ SK A+ G    +  EL 
Sbjct: 128 FLS-YVVMSTAALPMLKQSNGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTEL- 185
Query: 188 KYGIRVNC 195
            Y  +VN 
Sbjct: 186 -YITKVNV 192

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 24/220 (10%)
Query: 8   DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKV--------CIADVQDNLGQQVC 59
           D S   + L GRV L+TG A GIG +  R +  HGA V         +A+V D +     
Sbjct: 4   DYSAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKS--- 60
Query: 60  QSLGGEPDTFFCHCDV-----TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIRE 114
               G+P       ++      +  ++ + V+    +FG LD +++NA I G   P + +
Sbjct: 61  ---AGQPQPLIIALNLENATAQQYRELAARVE---HEFGRLDGLLHNASIIGPRTP-LEQ 113
Query: 115 ADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA 174
               +F +V  +NV   F   +    ++      +I    S  G  G     AY  SK A
Sbjct: 114 LPDEDFXQVXHVNVNATFXLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFA 173
Query: 175 VLGLNKNVAAEL-GKYGIRVNCVSPYAVATGLALAHLPEE 213
             GL + +A EL G   +R N ++P A  TG      P+E
Sbjct: 174 TEGLXQTLADELEGVTAVRANSINPGATRTGXRAQAYPDE 213

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 23/215 (10%)
Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQV------CQ 60
           P    L G+   I+GG+ GIG +  +     GA V +    A+    L   +       +
Sbjct: 2   PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE 61
Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
             GG+        D+   + V +AV  TVE+FG +DI VNNA  S      I E  L  F
Sbjct: 62  EAGGQ--ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNA--SAINLGSIEEVPLKRF 117
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGT----IISIC-SVAGAIGGLGPHAYTGSKHAV 175
           + +  I V+G +      ++  IP  KG     I+++   +      L P  Y  +K+ +
Sbjct: 118 DLMNGIQVRGTY----AVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGM 173
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHL 210
                 +A EL   GI  N + P       A+ +L
Sbjct: 174 TLCALGIAEELRDAGIASNTLWPRTTVATAAVQNL 208

>pdb|2O2S|A Chain A, The Structure Of T. Gondii Enoyl Acyl Carrier Protein Reductase In Complex With Nad And Triclosan Length = 315

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRV 193
           ++H   IM        +S  +    + G G    + +K A+    + +A E G KYG+RV
Sbjct: 161 LQHFGPIMNEGGSAVTLSYLAAERVVPGYG-GGMSSAKAALESDTRTLAWEAGQKYGVRV 219
Query: 194 NCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           N +S  P       A+    E+   + A+    ++   NA ++  +L ++DV  A LFL 
Sbjct: 220 NAISAGPLKSRAASAIGKSGEKSFIDYAI----DYSYNNAPLR-RDLHSDDVGGAALFLL 274
Query: 252 SDEARYISGTNLMVDGGFTSVNHSL 276
           S  AR +SG  L VD G  ++  ++
Sbjct: 275 SPLARAVSGVTLYVDNGLHAMGQAV 299

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 113/274 (41%), Gaps = 45/274 (16%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFC 71
           L GR  ++ G A    I     R  H+ GA++      + L + V +  G     D+   
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIIL 64
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            CDVT + ++ +      E+ G +       GI+       +E  + E+    + N  G 
Sbjct: 65  PCDVTNDAEIETCFASIKEQVGVIH------GIAHCIAFANKEELVGEY---LNTNRDGF 115
Query: 132 F--HGMK--------HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
              H +          AAR M+ +  G+I+++  + G +     +    +K ++    K 
Sbjct: 116 LLAHNISSYSLTAVVKAARPMMTE-GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKY 174
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF------VARNANMQG 235
           +AA+LGK  IRVN +S   +             RT  A  G  +F      +   A ++ 
Sbjct: 175 LAADLGKENIRVNSISAGPI-------------RTLSAK-GISDFNSILKDIEERAPLRR 220
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           T  T  +V +   FL SD +R I+G NL VD GF
Sbjct: 221 TT-TPEEVGDTAAFLFSDMSRGITGENLHVDSGF 253

>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 110/265 (41%), Gaps = 26/265 (9%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 63
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP----DIREADLSE-FEKVFDINV 128
           DV ++  + +      + +   D  V++  I+ AP      D   A   E F+   DI+ 
Sbjct: 64  DVAEDASIDTMFAELGKVWPKFDGFVHS--IAFAPGDQLDGDYVNAVTREGFKIAHDISS 121
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELG 187
              F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G
Sbjct: 122 YS-FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG 178
Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVAN 245
             G+RVN +S   + T LA + + +          FR  +A    +      +T  DV N
Sbjct: 179 PEGVRVNAISAGPIRT-LAASGIKD----------FRKMLAHCEAVTPIRRTVTIEDVGN 227
Query: 246 AVLFLASDEARYISGTNLMVDGGFT 270
           +  FL SD +  ISG  + VDGGF+
Sbjct: 228 SAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|1CWU|A Chain A, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed With Nad+ And Thienodiazaborine Length = 296

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
           V  A +   + FG++DI+V++ G        + E     +      +       + H   
Sbjct: 105 VQEAAECVRQDFGSIDILVHSLGNGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP 164
Query: 141 IMIPQTKGTIISICSVAGA--IGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRVNCVS 197
           IM P   G  IS+  +A    I G G    + +K A+    + +A E G K  IRVN +S
Sbjct: 165 IMNP--GGASISLTYIASERIIPGYG-GGMSSAKAALESDTRVLAFEAGRKQNIRVNTIS 221
Query: 198 --PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
             P       A+  +       D M+    +   NA +Q T LTA++V NA  FL S  A
Sbjct: 222 AGPLGSRAAKAIGFI-------DTMI---EYSYNNAPIQKT-LTADEVGNAAAFLVSPLA 270
Query: 256 RYISGTNLMVDGGFTSVNHSL 276
             I+G  + VD G  S+  +L
Sbjct: 271 SAITGATIYVDNGLNSMGVAL 291

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 33/271 (12%)
Query: 13  VQRLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPD 67
           ++ L G+  ++ G A    I     R  H  GAK+      + L + V     +L G+ +
Sbjct: 1   MELLQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQ-E 59
Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLD------IMVNNAGISGAPCPDIREADLSEFE 121
           +    CDVT +E++ +  +   ++ GT+          N   + G      R+     F 
Sbjct: 60  SLVLPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDG----FL 115
Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
              +I+   +    + A ++M     G I+++  + G       +    +K ++    K 
Sbjct: 116 LAQNISAFSLTAVAREAKKVMTE--GGNILTLTYLGGERVVKNYNVMGVAKASLEASVKY 173
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG---TEL 238
           +A +LG++GIRVN +S   + T  A              VG  N + R    +       
Sbjct: 174 LANDLGQHGIRVNAISAGPIRTLSAKG------------VGDFNSILREIEERAPLRRTT 221
Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGF 269
           T  +V +  +FL SD AR ++G N+ VD G+
Sbjct: 222 TQEEVGDTAVFLFSDLARGVTGENIHVDSGY 252

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 20/204 (9%)
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNN--AGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           E++    ++      G +DI+V+N  A +   P       D  +  +   I    + + +
Sbjct: 56  EQEPVELIEAVTSALGHVDILVSNDIAPVEWRPIDKYAVEDYRDMVEALQIKPFALANAV 115
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPH----AYTGSKHAVLGLNKNVAAELGKYGI 191
              A  M  +  G II I S A      GP      Y  ++     L   ++ ELG++ I
Sbjct: 116 ---ASQMKRRKSGHIIFITSAAS----FGPWKELSTYASARAGASALANALSKELGEHNI 168
Query: 192 RVNCVSPYAVATGLALAHLPEEE-RTEDAMVGF-RNFVARNANMQGTELTANDVANAVLF 249
            V  ++P  V +G +  + P E  +T    V + R + A      GT+    ++   V F
Sbjct: 169 PVFAIAPNGVDSGDSPYYYPSEPWKTSPEHVAWVRKYTA--LQRLGTQ---KELGELVTF 223
Query: 250 LASDEARYISGTNLMVDGGFTSVN 273
           LAS    Y++G    + GGF  V 
Sbjct: 224 LASGSCDYLTGQVFWLAGGFPVVE 247

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 33/271 (12%)
Query: 13  VQRLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPD 67
           ++ L G+  ++ G A    I     R  H  GAK+      + L + V     +L G+ +
Sbjct: 1   MELLQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQ-E 59
Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLD------IMVNNAGISGAPCPDIREADLSEFE 121
           +    CDVT +E++ +  +   ++ GT+          N   + G      R+     F 
Sbjct: 60  SLVLPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDG----FL 115
Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
              +I+   +    + A ++M     G I+++  + G       +    +K ++    K 
Sbjct: 116 LAQNISAFSLTAVAREAKKVMTE--GGNILTLTYLGGERVVKNYNVMGVAKASLEASVKY 173
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG---TEL 238
           +A +LG++GIRVN +S   + T  A              VG  N + R    +       
Sbjct: 174 LANDLGQHGIRVNAISAGPIRTLSAKG------------VGDFNSILREIEERAPLRRTT 221
Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGF 269
           T  +V +  +FL SD AR ++G N+ VD G+
Sbjct: 222 TQEEVGDTAVFLFSDLARGVTGENIHVDSGY 252

>pdb|1D7O|A Chain A, Crystal Structure Of Brassica Napus Enoyl Acyl Carrier Protein Reductase Complexed With Nad And Triclosan Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 27/205 (13%)
Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG----MK 136
           V  A +   + FG++DI+V+    S A  P++ +  L    K +   +    +     + 
Sbjct: 106 VQEAAECVRQDFGSIDILVH----SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161
Query: 137 HAARIMIPQTKGTIISICSVAGA--IGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRV 193
           H   IM P   G  IS+  +A    I G G    + +K A+    + +A E G K  IRV
Sbjct: 162 HFLPIMNP--GGASISLTYIASERIIPGYG-GGMSSAKAALESDTRVLAFEAGRKQNIRV 218
Query: 194 NCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           N +S  P       A+  +       D M+    +   NA +Q T LTA++V NA  FL 
Sbjct: 219 NTISAGPLGSRAAKAIGFI-------DTMI---EYSYNNAPIQKT-LTADEVGNAAAFLV 267
Query: 252 SDEARYISGTNLMVDGGFTSVNHSL 276
           S  A  I+G  + VD G  S+  +L
Sbjct: 268 SPLASAITGATIYVDNGLNSMGVAL 292

>pdb|1ENO|A Chain A, Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLEX AT PH 8.0 AND Room Temperature Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 27/205 (13%)
Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG----MK 136
           V  A +   + FG++DI+V+    S A  P++ +  L    K +   +    +     + 
Sbjct: 116 VQEAAECVRQDFGSIDILVH----SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 171
Query: 137 HAARIMIPQTKGTIISICSVAGA--IGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRV 193
           H   IM P   G  IS+  +A    I G G    + +K A+    + +A E G K  IRV
Sbjct: 172 HFLPIMNP--GGASISLTYIASERIIPGYG-GGMSSAKAALESDTRVLAFEAGRKQNIRV 228
Query: 194 NCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           N +S  P       A+  +       D M+    +   NA +Q T LTA++V NA  FL 
Sbjct: 229 NTISAGPLGSRAAKAIGFI-------DTMI---EYSYNNAPIQKT-LTADEVGNAAAFLV 277
Query: 252 SDEARYISGTNLMVDGGFTSVNHSL 276
           S  A  I+G  + VD G  S+  +L
Sbjct: 278 SPLASAITGATIYVDNGLNSMGVAL 302

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 65
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 66  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 123
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 124 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 180
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 181 -YSVSRVNV 188

>pdb|2O50|A Chain A, The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl Carrier Protein Reductase Length = 315

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 169 TGSKHAVLGLNKNVAAELG-KYGIRVNCVS--PYAVATGLALAHLPEEERTEDAMVGFRN 225
           + +K A+    + +A E G KYG+RVN +S  P       A+    E+   + A+    +
Sbjct: 194 SSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAI----D 249
Query: 226 FVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           +   NA ++  +L ++DV  A LFL S  AR +SG  L VD G 
Sbjct: 250 YSYNNAPLR-RDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 79
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 80  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 137
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 138 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 194
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 195 -YSVSRVNV 202

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 11  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 66
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 67  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 124
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 125 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 181
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 182 -YSVSRVNV 189

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 30  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 85
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 86  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 143
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 144 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKE-- 200
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 201 -YSVSRVNV 208

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 13  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 68
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 69  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 126
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 127 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 183
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 184 -YSVSRVNV 191

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 20  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 75
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 76  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 133
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 134 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 190
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 191 -YSVSRVNV 198

>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 109/265 (41%), Gaps = 26/265 (9%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 63
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP----DIREADLSE-FEKVFDINV 128
           DV ++  + +      + +   D  V++  I  AP      D   A   E F+   DI+ 
Sbjct: 64  DVAEDASIDTMFAELGKVWPKFDGFVHS--IVFAPGDQLDGDYVNAVTREGFKIAHDISS 121
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELG 187
              F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G
Sbjct: 122 YS-FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG 178
Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVAN 245
             G+RVN +S   + T LA + + +          FR  +A    +      +T  DV N
Sbjct: 179 PEGVRVNAISAGPIRT-LAASGIKD----------FRKMLAHCEAVTPIRRTVTIEDVGN 227
Query: 246 AVLFLASDEARYISGTNLMVDGGFT 270
           +  FL SD +  ISG  + VDGGF+
Sbjct: 228 SAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 5   EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 60
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 61  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 118
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 119 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 175
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 176 -YSVSRVNV 183

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 30  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 85
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 86  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 143
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 144 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKE-- 200
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 201 -YSVSRVNV 208

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 65
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 66  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 123
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 124 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKE-- 180
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 181 -YSVSRVNV 188

>pdb|3K2E|A Chain A, Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) Reductase From Anaplasma Phagocytophilum At 1.9a Resolution Length = 296

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 99/235 (42%), Gaps = 21/235 (8%)
Query: 41  HGAKVCIADVQDNLGQQV---CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI 97
            GA+V +  + +   ++V    +SLG +       CDV+  E V +   +  E++G+LD 
Sbjct: 55  QGAEVALTYLSETFKKRVDPLAESLGVK---LTVPCDVSDAESVDNMFKVLAEEWGSLDF 111
Query: 98  MVNNAGISGAPCPDIREAD--LSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS 155
           +V+    S       R  D  L  F     I+     +    A  +M   T G  I   S
Sbjct: 112 VVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLM---TNGGSILTLS 168
Query: 156 VAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE 214
             GA   +  +   G   A L  + K +A +LGK  IRVN +S   V T LA + + +  
Sbjct: 169 YYGAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRT-LASSGISDFH 227
Query: 215 RTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
                   + + + RN        T +DV  A L+L SD  R  +G  + VD G+
Sbjct: 228 YIL-TWNKYNSPLRRNT-------TLDDVGGAALYLLSDLGRGTTGETVHVDCGY 274

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 79
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 80  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSL-NLFHDDIHHVRKSMEVN 137
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 138 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 194
Query: 188 KYGI-RVN 194
            Y + RVN
Sbjct: 195 -YSVSRVN 201

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 27  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 82
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 83  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 140
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 141 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 197
Query: 188 KYGI-RVN 194
            Y + RVN
Sbjct: 198 -YSVSRVN 204

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 33/174 (18%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL--GGEPDTFFCHCDVT 76
           R A++TGG  GIG    +    +G  V +       G +  + L      +  F   DVT
Sbjct: 13  RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVT 72
Query: 77  KE-EDVCSAVDLTVEKFGTLDIMVNNAGISG---------APCPDIREADLSEFEKVFDI 126
                + S  D     FG LDI+VNNAG++G         A   DI E D  E  K+++ 
Sbjct: 73  DPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGE-DSEELVKIYEK 131
Query: 127 N----------------VKGVFHGMKHAARIMIPQTKGT----IISICSVAGAI 160
                            +K  ++G+K    ++IP  + +    I+++ S  G++
Sbjct: 132 PEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSL 185

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Query: 19  RVALITGGATGIGESTVR-LFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVT 76
           RVAL+TG   GIG +  R L  +    V +       GQ   Q L  E     F   D+ 
Sbjct: 3   RVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDID 62
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             + + +  D   +++G L+++VNNA ++       +  D   F+   ++ +K  F   +
Sbjct: 63  DLQSIRALRDFLRKEYGGLNVLVNNAAVA------FKSDDPMPFDIKAEMTLKTNFFATR 116
Query: 137 HAARIMIPQTK--GTIISICSV 156
           +    ++P  K  G +++I S+
Sbjct: 117 NMCNELLPIMKPHGRVVNISSL 138

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 13/179 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 7   EMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAAS---- 62
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A +   E     G LD+++ N  +           ++    K  ++N
Sbjct: 63  AHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLT--FFHGEIDNVRKSMEVN 120
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
               F  +  AA  M+ Q++G+I  + SVAG I       Y+ SK A+ G    + +E 
Sbjct: 121 FHS-FVVLSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF 178

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 13/179 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 5   EMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAAS---- 60
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A +   E     G LD+++ N  +           ++    K  ++N
Sbjct: 61  AHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLT--FFHGEIDNVRKSMEVN 118
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
               F  +  AA  M+ Q++G+I  + SVAG I       Y+ SK A+ G    + +E 
Sbjct: 119 FHS-FVVLSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF 176

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 13/179 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 7   EMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAAS---- 62
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A +   E     G LD+++ N  +           ++    K  ++N
Sbjct: 63  AHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLT--FFHGEIDNVRKSMEVN 120
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
               F  +  AA  M+ Q++G+I  + SVAG I       Y+ SK A+ G    + +E 
Sbjct: 121 FHS-FVVLSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF 178

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 99/266 (37%), Gaps = 71/266 (26%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE 79
           V ++ GG +GIG    +        V +A  Q  L                   D++ E+
Sbjct: 8   VYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGL-------------------DISDEK 48
Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA 139
            V        E  G  D ++  AG S AP   + + ++++ +  FD    G     KH A
Sbjct: 49  SVYH----YFETIGAFDHLIVTAG-SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGA 103
Query: 140 RIM-----IPQTKG----TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           R +     I  T G     +++   V  AI             A+    K +A EL    
Sbjct: 104 RYLKQGGSITLTSGMLSRKVVANTYVKAAINA-----------AIEATTKVLAKELAP-- 150
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL--------TAND 242
           IRVN +SP     GL      +    +D          R+A  Q T+          A+D
Sbjct: 151 IRVNAISP-----GLTKTEAYKGMNADD----------RDAMYQRTQSHLPVGKVGEASD 195
Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           +A A LF   +   Y++GT + VDGG
Sbjct: 196 IAMAYLFAIQNS--YMTGTVIDVDGG 219

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 13/179 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 28  EMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAAS---- 83
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A +   E     G LD+++ N  +           ++    K  ++N
Sbjct: 84  AHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLT--FFHGEIDNVRKSMEVN 141
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
               F  +  AA  M+ Q++G+I  + SVAG I       Y+ SK A+ G    + +E 
Sbjct: 142 FHS-FVVLSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF 199

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	280
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-132
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-110
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-103
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-100
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	4e-98
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	5e-98
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-97
4dqx_A	277	Probable oxidoreductase protein; structural genomi	9e-97
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-96
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	4e-94
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	6e-94
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	7e-94
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-93
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-92
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	7e-91
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-90
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	4e-89
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	9e-88
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-87
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	6e-87
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-86
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	9e-86
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-85
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-85
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	3e-85
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	3e-84
1spx_A	278	Short-chain reductase family member (5L265); paral	6e-84
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-83
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-82
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-82
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-81
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	5e-81
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-80
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-80
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	4e-80
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	7e-80
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	9e-80
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-79
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	4e-79
1xhl_A	297	Short-chain dehydrogenase/reductase family member	8e-79
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-78
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	4e-78
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	7e-78
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	9e-78
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-77
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	1e-77
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-77
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-77
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	4e-77
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	4e-77
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	6e-77
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	7e-77
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-76
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-75
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	4e-74
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	7e-74
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	8e-74
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-73
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-73
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-73
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-73
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-73
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	7e-73
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-72
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-72
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-72
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-72
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-72
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	1e-71
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-71
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-71
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	4e-71
1xq1_A	266	Putative tropinone reducatse; structural genomics,	4e-71
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	7e-71
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-70
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-70
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	4e-70
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	6e-70
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	7e-70
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-69
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-69
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-69
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-69
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	4e-69
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	6e-69
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	8e-69
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-68
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-68
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	3e-68
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	8e-67
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-66
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	3e-66
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	3e-66
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	3e-66
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-66
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	6e-66
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-65
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	8e-65
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-64
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-64
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-64
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-64
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-64
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	3e-64
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	3e-64
3rih_A	293	Short chain dehydrogenase or reductase; structural	4e-64
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	6e-64
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-63
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	3e-63
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-63
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	9e-63
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-62
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-62
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-62
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-62
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-62
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	8e-62
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-61
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	8e-61
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-60
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-60
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-60
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-60
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	4e-60
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	4e-60
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	5e-60
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	5e-60
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	6e-60
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	8e-60
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-59
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-59
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	5e-59
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	6e-59
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	7e-59
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-58
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-58
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-58
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-58
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-58
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-58
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-58
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-58
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	5e-58
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	5e-58
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-58
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	1e-57
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-57
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	6e-57
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-56
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	7e-56
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	1e-55
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-55
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	3e-55
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	3e-55
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	5e-55
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	9e-55
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-54
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-53
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	4e-53
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-52
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-52
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	5e-52
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-52
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	7e-52
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	4e-51
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	6e-51
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-50
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-49
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	5e-49
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-48
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	7e-48
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	3e-47
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-46
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	6e-44
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	8e-45
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	6e-44
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	4e-40
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-38
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	1e-37
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	6e-37
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	7e-37
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-34
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	6e-27
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	4e-25
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-24
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	5e-24
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	4e-21
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	5e-21
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	7e-21
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	1e-20
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	2e-20
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	5e-20
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	1e-19
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-19
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	2e-19
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-19
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	2e-19
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-15
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	1e-14
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	2e-13
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	1e-12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-11
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	5e-10
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	1e-06

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  374 bits (964), Expect = e-132
 Identities = 131/277 (47%), Positives = 178/277 (64%), Gaps = 9/277 (3%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M ++++ DSS    RL  +VA+ITGGA GIGE+T +LF ++GAKV IAD+ D+ GQ+VC 
Sbjct: 1   MGSTSTPDSST--NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN 58

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           ++G      F HCDVTK+EDV + VD T+ K G LDIM  N G+       I EA   +F
Sbjct: 59  NIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDF 118

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-PHAYTGSKHAVLGLN 179
           ++V DINV G F   KHAAR+MIP  KG+I+   S++    G G  H YT +KHAVLGL 
Sbjct: 119 KRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLT 178

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
            ++  ELG+YGIRVNCVSPY VA+ L       +    + +        + AN++GT L 
Sbjct: 179 TSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEEL------AHQAANLKGTLLR 232

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSL 276
           A DVA+AV +LA DE++Y+SG NL++DGG+T  N + 
Sbjct: 233 AEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAF 269

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  318 bits (817), Expect = e-110
 Identities = 94/258 (36%), Positives = 136/258 (52%), Gaps = 20/258 (7%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+VAL++GGA G+G S VR     GAKV   D+ D  G+ +   L       + H 
Sbjct: 3   GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA--ARYVHL 60

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT+     +AVD  V  FG L ++VNNAGI       I +  L+E++++ D+N+ GVF 
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG--TIEDYALTEWQRILDVNLTGVFL 118

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           G++   + M    +G+II+I S+ G  G +  H YT +K AV GL K+ A ELG  GIRV
Sbjct: 119 GIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRV 178

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N + P  V T +    +PE+                     G      +V+N V++LASD
Sbjct: 179 NSIHPGLVKTPM-TDWVPEDIF---------------QTALGRAAEPVEVSNLVVYLASD 222

Query: 254 EARYISGTNLMVDGGFTS 271
           E+ Y +G   +VDGG  +
Sbjct: 223 ESSYSTGAEFVVDGGTVA 240

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  299 bits (768), Expect = e-103
 Identities = 86/261 (32%), Positives = 125/261 (47%), Gaps = 17/261 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+VAL+TGGA+G+G   V+L    GAKV  +D+ +  GQQ+   LG    + F   
Sbjct: 2   NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER--SMFVRH 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV+ E D    +     + GTL+++VNNAGI      D+    L +F ++  IN + VF 
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFI 117

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK--YGI 191
           G +     M     G+II++ SV+  +       Y+ SK AV  L +  A    K  Y I
Sbjct: 118 GCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAI 176

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVLF 249
           RVN + P  + T +  A LP+    E         V  +  +   G       +A  VLF
Sbjct: 177 RVNSIHPDGIYTPMMQASLPKGVSKE--------MVLHDPKLNRAGRAYMPERIAQLVLF 228

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LASDE+  +SG+ L  D    
Sbjct: 229 LASDESSVMSGSELHADNSIL 249

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  291 bits (748), Expect = e-100
 Identities = 92/257 (35%), Positives = 123/257 (47%), Gaps = 14/257 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L G+  +ITGGA G+G    R     GA+V +ADV D  G    + LG      + H D
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA--ARYQHLD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT EED    V    E+FG++D +VNNAGIS      +    +  F KV +IN+ GVF G
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM--FLETESVERFRKVVEINLTGVFIG 117

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           MK     M     G+I++I S AG +G     +Y  SK  V GL+K  A ELG   IRVN
Sbjct: 118 MKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVN 177

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V P    T +       +                     G E    ++A AV+ L SD 
Sbjct: 178 SVHPGMTYTPMTAETGIRQGEGNYPNTPMGRV--------GNE--PGEIAGAVVKLLSDT 227

Query: 255 ARYISGTNLMVDGGFTS 271
           + Y++G  L VDGG+T+
Sbjct: 228 SSYVTGAELAVDGGWTT 244

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  287 bits (738), Expect = 4e-98
 Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 12/258 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             L  +VA+ITG   GIG  T R+  + GA+V +AD+ +        S+G          
Sbjct: 7   AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRG--AVHHVV 64

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D+T E  V + +D T++ FG LDI+ NNA  S      + +  +  ++  F +N +G   
Sbjct: 65  DLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             K+A   +I    G I++I S           AY  +K A+  L + VA + G++G+R 
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRC 184

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N ++P  V T      LP+             F   +    G     +++A  V FLASD
Sbjct: 185 NAIAPGLVRTPRLEVGLPQPIV--------DIFATHHL--AGRIGEPHEIAELVCFLASD 234

Query: 254 EARYISGTNLMVDGGFTS 271
            A +I+G  +  D G  +
Sbjct: 235 RAAFITGQVIAADSGLLA 252

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  287 bits (738), Expect = 5e-98
 Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 8/270 (2%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           +        S     L G+VA++TG   GIG +  R     G  V  AD+  +       
Sbjct: 12  LEAQTQGPGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAAT 71

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
            +G       C  DV+ E+ + + VD  V  FG +D +V NAG+       + +  + +F
Sbjct: 72  KIGCG--AAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLA--SLIDTTVEDF 127

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           ++V  IN++G +   KHAA  MI +  G I+++ S+AG +   G  AY  SK  ++ L++
Sbjct: 128 DRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSR 187

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
             AAEL   GIR N + P  V T +    +   +    A           A +QG     
Sbjct: 188 ITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARS----MIARLQGRMAAP 243

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFT 270
            ++A  V+FL SD+A  I+GT  + DGG  
Sbjct: 244 EEMAGIVVFLLSDDASMITGTTQIADGGTI 273

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  286 bits (735), Expect = 1e-97
 Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 7/267 (2%)

Query: 7   TDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---G 63
           T +S    R   RV LITGG +G+G +T       GAK+ + DV     +    ++    
Sbjct: 2   TATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA 61

Query: 64  GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV 123
            + +      DV+ E  V + V  T E+FG +D   NNAGI G   P       +EF+KV
Sbjct: 62  PDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNP-TESFTAAEFDKV 120

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
             IN++GVF G++   +IM  Q  G +++  SV G  G      Y  +KH V+GL +N A
Sbjct: 121 VSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSA 180

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            E G+YGIR+N ++P A+ T + + +  ++   E+       F+  N         A ++
Sbjct: 181 VEYGRYGIRINAIAPGAIWTPM-VENSMKQLDPENPRKAAEEFIQVNP--SKRYGEAPEI 237

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFT 270
           A  V FL SD+A Y++ T + +DGG +
Sbjct: 238 AAVVAFLLSDDASYVNATVVPIDGGQS 264

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  284 bits (730), Expect = 9e-97
 Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 13/277 (4%)

Query: 3   NSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL 62
           +  + +       L  RV ++TGG +GIG +T  LF K+GA V +ADV ++   +V   +
Sbjct: 12  DLGTENLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI 71

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK 122
           G +   F    DV+  +D  S V+ T  K+G +D++VNNAG       ++       +++
Sbjct: 72  GSK--AFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTG--NVVTIPEETWDR 127

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           +  +NVKG+F   K+   +M     G+II+  S           AY  SK A+  L + +
Sbjct: 128 IMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAM 187

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA--RNANMQGTELTA 240
           A +  K GIRVN V+P  + +        E +        F       R         TA
Sbjct: 188 AMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMG-------TA 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLR 277
            ++A A+LFLASD +R+ +G+ L VDGG +  NH ++
Sbjct: 241 EEIAEAMLFLASDRSRFATGSILTVDGGSSIGNHLVK 277

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  283 bits (726), Expect = 2e-96
 Identities = 84/258 (32%), Positives = 126/258 (48%), Gaps = 15/258 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           R  G+V ++TGG  GIG   VR F   GA+V I D  ++ G+ + Q L G     F  CD
Sbjct: 6   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG---AVFILCD 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT+E+DV + V  T+ +FG LD +VNNAG    P     E     F ++ ++N+ G +  
Sbjct: 63  VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQR-PEETSAQGFRQLLELNLLGTYTL 121

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K A   +  +++G +I+I S+ GAIG      Y  +K AV  + K +A +   YG+RVN
Sbjct: 122 TKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 180

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFV--ARNANMQGTELTANDVANAVLFLAS 252
           C+SP  + T L             ++          R            +V  A +FLAS
Sbjct: 181 CISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMG-------QPAEVGAAAVFLAS 233

Query: 253 DEARYISGTNLMVDGGFT 270
           + A + +G  L+V GG  
Sbjct: 234 E-ANFCTGIELLVTGGAE 250

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  277 bits (712), Expect = 4e-94
 Identities = 80/271 (29%), Positives = 122/271 (45%), Gaps = 14/271 (5%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFF 70
            RL G++A++TG ++GIG +   LF + GAKV +     N   ++   +   GGE     
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE--AAA 61

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV  E    + V+L V +FG LD   NNAG  GA    I    +  + +  D N+  
Sbjct: 62  LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGE-ISSLSVEGWRETLDTNLTS 120

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKY 189
            F   K+    +     G++    S  G   G  G   Y  SK  ++GL + +A ELG  
Sbjct: 121 AFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGAR 180

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRVN + P    T    A+LP         V   + + R A          ++A A L+
Sbjct: 181 GIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIA-------RPEEIAEAALY 233

Query: 250 LASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           LASD A +++G  L+ DGG +    +  ++ 
Sbjct: 234 LASDGASFVTGAALLADGGASVTKAAENLYF 264

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  276 bits (709), Expect = 6e-94
 Identities = 80/261 (30%), Positives = 131/261 (50%), Gaps = 15/261 (5%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+VA+ITGG  GIG +    F + GAKV I     ++G++  +S+G      F   
Sbjct: 2   NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQH 61

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D + E+      D T + FG +  +VNNAGI+      + E   +E+ K+  +N+ GVF 
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFF 119

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG--KYG 190
           G +   + M  +    +II++ S+ G +G     AY  SK AV  ++K+ A +     Y 
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYD 179

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           +RVN V P  + T L +  LP  E         +  +             ND+A   ++L
Sbjct: 180 VRVNTVHPGYIKTPL-VDDLPGAEEAMSQRT--KTPMGHIG-------EPNDIAYICVYL 229

Query: 251 ASDEARYISGTNLMVDGGFTS 271
           AS+E+++ +G+  +VDGG+T+
Sbjct: 230 ASNESKFATGSEFVVDGGYTA 250

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  276 bits (709), Expect = 7e-94
 Identities = 82/266 (30%), Positives = 122/266 (45%), Gaps = 18/266 (6%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF 70
           P    L G+VALITG  +G GE   + F K GAKV I D      ++V   +G       
Sbjct: 2   PGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDA--ALA 59

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D++KE DV +AV+  + KFG +DI+VNNAGI   P       +  EF+++  +NV+G
Sbjct: 60  VAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQN-AELVEPEEFDRIVGVNVRG 118

Query: 131 VFHGMKHAARIMIPQTKG----TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
           V+                     I+++ S            Y  +K  V+ + K +A EL
Sbjct: 119 VYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIEL 178

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV--ARNANMQGTELTANDVA 244
               IRV  ++P A  T L    + E+  +E+    FR+ +   R           +D+A
Sbjct: 179 APAKIRVVALNPVAGETPLLTTFMGED--SEEIRKKFRDSIPMGRLL-------KPDDLA 229

Query: 245 NAVLFLASDEARYISGTNLMVDGGFT 270
            A  FL S +A  I+G  L VDGG +
Sbjct: 230 EAAAFLCSPQASMITGVALDVDGGRS 255

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  274 bits (704), Expect = 3e-93
 Identities = 80/262 (30%), Positives = 132/262 (50%), Gaps = 13/262 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           Q L  +V ++TG  +GIG +  + F  + + V   ++ ++   Q+    + +G E     
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE--VLG 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV+K++DV   V  T E +  +D++ NNAGI     P + E     +E+V  +N+  
Sbjct: 61  VKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTP-VAEVSDELWERVLAVNLYS 119

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            F+  +    IM+ Q KG I++  S+AG  GG     YT +KH ++GL +++AA  G  G
Sbjct: 120 AFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQG 179

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IR   V P  V T + L      E     +    +  +R A          D+AN ++FL
Sbjct: 180 IRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLA-------EPEDIANVIVFL 232

Query: 251 ASDEARYISGTNLMVDGGFTSV 272
           ASDEA +++G  ++VDGG T +
Sbjct: 233 ASDEASFVNGDAVVVDGGLTVL 254

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  272 bits (699), Expect = 2e-92
 Identities = 83/259 (32%), Positives = 135/259 (52%), Gaps = 12/259 (4%)

Query: 17  VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCHCD 74
           + RVA++TG ++G G +    F   G +V   D+     ++  ++              D
Sbjct: 1   MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRAD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           V  E DV +A+  T+E+FG +D++VNNAGI+G +    +    + +F+KV  +NV+G+F 
Sbjct: 61  VADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           G +     M+ Q  G I++I SVA  +   G  AYT SK AVL L K+VA +    GIR 
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V P  + T +      ++    D ++  R              TA  VA+AV+FLA +
Sbjct: 181 NAVCPGMIETPM-TQWRLDQPELRDQVLA-RIPQKEIG-------TAAQVADAVMFLAGE 231

Query: 254 EARYISGTNLMVDGGFTSV 272
           +A Y++G  L++DG +T++
Sbjct: 232 DATYVNGAALVMDGAYTAI 250

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  269 bits (689), Expect = 7e-91
 Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 11/263 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           ++  G+V L+TG    IG +T     + G  + + D+     ++     +  G E     
Sbjct: 3   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE--ARS 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
             CDVT EE V   VD  V  FG +D + NNAG  GA  P +++    +F +V  INV G
Sbjct: 61  YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAP-VQDYPSDDFARVLTINVTG 119

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            FH +K  +R MI Q  G I++  S+AG  G     AY  SK A++ L +  A +L  Y 
Sbjct: 120 AFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYN 179

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE-----LTANDVAN 245
           IRVN +SP  +  G       E +    +     +       M G+         N++  
Sbjct: 180 IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPG 239

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
            V FL  D++ +++G NL + GG
Sbjct: 240 VVAFLLGDDSSFMTGVNLPIAGG 262

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  268 bits (688), Expect = 1e-90
 Identities = 81/258 (31%), Positives = 124/258 (48%), Gaps = 12/258 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +    +VA++TGG++GIG + V    ++GAKV    + +     V               
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF---------KI 60

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT EE+V  AV+ T +K+G +DI+VNNAGI       +       + ++ D+NV G + 
Sbjct: 61  DVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYS--PLHLTPTEIWRRIIDVNVNGSYL 118

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             K+   +M+    G+II+I SV          AY  SKHA+LGL ++VA +     IR 
Sbjct: 119 MAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRC 177

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V P  + T + +     E   ++  V  +       +  G      +VA  V FLASD
Sbjct: 178 NAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASD 237

Query: 254 EARYISGTNLMVDGGFTS 271
            + +I+G  L VDGG  S
Sbjct: 238 RSSFITGACLTVDGGLLS 255

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  264 bits (677), Expect = 4e-89
 Identities = 81/258 (31%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
              G+  L+TGGA GIG +  + F + GA V + D++   G++V +++GG     F   D
Sbjct: 3   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGGA----FFQVD 57

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +  E +    V+      G +D++VNNA I+           L E+ +V ++N+    H 
Sbjct: 58  LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG--SALTVRLPEWRRVLEVNLTAPMHL 115

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
              AAR M     G I+++ SV G        AY  SK  ++ L +++A +L    IRVN
Sbjct: 116 SALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVN 175

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA--RNANMQGTELTANDVANAVLFLAS 252
            V+P A+AT   L  +      E     + +  A  R            +VA AVLFLAS
Sbjct: 176 AVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLG-------KPEEVAEAVLFLAS 228

Query: 253 DEARYISGTNLMVDGGFT 270
           ++A +I+G  L VDGG T
Sbjct: 229 EKASFITGAILPVDGGMT 246

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  262 bits (671), Expect = 9e-88
 Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 12/262 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFC 71
                VALITG  +GIG +T       G  V          ++V       GG+      
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQ--AIAL 82

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV+ E  + +AV   V KFG LDI+V NAGI+G   P I +    E+++   +N++G 
Sbjct: 83  EADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAP-IDDLKPFEWDETIAVNLRGT 141

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           F  +      +  +  G I+ + S+ G       G  AYT +K A + + + +A ELGK+
Sbjct: 142 FLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKH 201

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVL 248
            IRVN V P A+ T ++        R E+       +      +   +   + DVA  + 
Sbjct: 202 HIRVNAVCPGAIETNISDNTK---LRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIR 258

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           FL S+ AR+++G+ + +DGG  
Sbjct: 259 FLVSERARHVTGSPVWIDGGQG 280

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  260 bits (667), Expect = 3e-87
 Identities = 77/260 (29%), Positives = 110/260 (42%), Gaps = 14/260 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDT-FF 70
               R  L+TGG +GIG+         GA V I     +      Q L   G       +
Sbjct: 8   SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D+T E++   AVD      G L  +V+ AG S    P I + D   + +  D+NV G
Sbjct: 68  EPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGP-ITQVDSEAWRRTVDLNVNG 126

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
             + +KHAAR M+    G+ + I S+A +       AY  +K AV  L +  A ELG   
Sbjct: 127 TMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASW 186

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           +RVN + P  + T L  A + E              + R            DVAN  +FL
Sbjct: 187 VRVNSIRPGLIRTDLV-AAITESAELSSDYAM-CTPLPRQG-------EVEDVANMAMFL 237

Query: 251 ASDEARYISGTNLMVDGGFT 270
            SD A +++G  + VDGG  
Sbjct: 238 LSDAASFVTGQVINVDGGQM 257

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  259 bits (663), Expect = 6e-87
 Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 21/261 (8%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             L  +V ++TG + GIG +    F   G+KV    + D    +               C
Sbjct: 4   SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY----------DHIEC 53

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT  + V +++D   +++G++ ++VNNAGI       I    + E+ ++ D+N+ G ++
Sbjct: 54  DVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYG--KIESMSMGEWRRIIDVNLFGYYY 111

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             K A   MI     +I++I SV  +I      AY  SKHAV+GL K++A +     +R 
Sbjct: 112 ASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRC 170

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLF 249
           N V P  + T L +    E E   D M   +     +       +       +VA+AV F
Sbjct: 171 NAVCPATIDTPL-VRKAAELEVGSDPMRIEK---KISEWGHEHPMQRIGKPQEVASAVAF 226

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LAS EA +I+GT L VDGG +
Sbjct: 227 LASREASFITGTCLYVDGGLS 247

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  257 bits (660), Expect = 2e-86
 Identities = 87/261 (33%), Positives = 123/261 (47%), Gaps = 11/261 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +RL G+ ALITG A GIG +    + + GA V IAD+     +Q    +G     +    
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPA--AYAVQM 61

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           DVT+++ + +A+  TVE  G LDI+VNNA +   AP  +I       +EK+F INV G  
Sbjct: 62  DVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRES---YEKLFAINVAGTL 118

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
             ++ AAR MI Q   G II++ S AG  G      Y  +K AV+ L ++   +L K+ I
Sbjct: 119 FTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRI 178

Query: 192 RVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            VN ++P  V       +  L             R          G   TA D+    +F
Sbjct: 179 NVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVP--FGRMGTAEDLTGMAIF 236

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LAS E+ YI      VDGG  
Sbjct: 237 LASAESDYIVSQTYNVDGGNW 257

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  257 bits (658), Expect = 9e-86
 Identities = 83/280 (29%), Positives = 121/280 (43%), Gaps = 27/280 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---------------- 58
           R+ G+VA +TG A G G S      + GA +   D+   +   V                
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67

Query: 59  ---CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA 115
               +             DV   + + +AVD  VE+ G LDI+V NAGI       + + 
Sbjct: 68  ADLVKGHNRR--IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDT-LDKT 124

Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHA 174
              ++ ++ DIN+ GV+  +K     MI   + G+II   SV G         Y  +KH 
Sbjct: 125 SEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHG 184

Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           V+GL +    ELG++ IRVN V P  V T +       +    D      + +A    M 
Sbjct: 185 VVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMF 244

Query: 235 GTE----LTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
            T     +   D++NAVLF ASDEARYI+G  L +D G  
Sbjct: 245 HTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC 284

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  255 bits (655), Expect = 1e-85
 Identities = 86/263 (32%), Positives = 127/263 (48%), Gaps = 26/263 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFC 71
           RL G+ A+ITG   GIG+     F   GA V ++D+  +    V    Q LGG+   F C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ--AFAC 65

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            CD+T E+++ +  D  + K G +DI+VNNAG  G    D+  AD   F + +++NV   
Sbjct: 66  RCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMAD---FRRAYELNVFSF 122

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           FH  +  A  M     G I++I S+A     +   +Y  SK A   L +N+A +LG+  I
Sbjct: 123 FHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAV 247
           RVN ++P A+ T    + +  E                   +Q T +       D+ANA 
Sbjct: 183 RVNGIAPGAILTDALKSVITPE--------------IEQKMLQHTPIRRLGQPQDIANAA 228

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
           LFL S  A ++SG  L V GG  
Sbjct: 229 LFLCSPAASWVSGQILTVSGGGV 251

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  256 bits (656), Expect = 1e-85
 Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 9/260 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +L G VALITGGA+G+G + V  F   GA+V + D      +++  + GG         D
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGN--AVGVVGD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP---DIREADLSEFEKVFDINVKGV 131
           V   +D   A +  +  FG +D ++ NAGI            +   + F+ +F +NVKG 
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            H +K     ++   +G+++   S AG     G   YT +KHAV+GL + +A EL    +
Sbjct: 120 IHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HV 177

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN V+P  + T L             + V   + +     + G      +   A +F A
Sbjct: 178 RVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI-GRMPALEEYTGAYVFFA 236

Query: 252 SDEA-RYISGTNLMVDGGFT 270
           +       +G  L  DGG  
Sbjct: 237 TRGDSLPATGALLNYDGGMG 256

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  254 bits (651), Expect = 3e-85
 Identities = 76/257 (29%), Positives = 135/257 (52%), Gaps = 16/257 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+V ++T  A GIG++    F + GAKV   D+ ++  Q++ +  G +        D
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQ----TRVLD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VTK++ +    D    +   LD++ N AG        + + +  +++   ++NV+ ++  
Sbjct: 59  VTKKKQI----DQFANEVERLDVLFNVAGFVHHG--TVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +K     M+ Q  G II++ SVA ++ G+     Y+ +K AV+GL K+VAA+  + GIR 
Sbjct: 113 IKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRC 172

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           NCV P  V T      +      E+A     +F+ R     G   TA ++A   ++LASD
Sbjct: 173 NCVCPGTVDTPSLQERIQARGNPEEAR---NDFLKRQK--TGRFATAEEIAMLCVYLASD 227

Query: 254 EARYISGTNLMVDGGFT 270
           E+ Y++G  +++DGG++
Sbjct: 228 ESAYVTGNPVIIDGGWS 244

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  252 bits (647), Expect = 3e-84
 Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 18/263 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           QRL  ++A+ITG  +GIG +  + F   GA+V I   + ++       +GG         
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGG--AVGIQA 82

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           D     ++    +    + G +D++  NAG     P  ++ E     ++  FD NVKGV 
Sbjct: 83  DSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQ---YDDTFDRNVKGVL 139

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             ++ A  ++      +++   S AG+ G      Y  SK A+    +N   +L   GIR
Sbjct: 140 FTVQKALPLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIR 197

Query: 193 VNCVSPYAVAT-GLALAHLPEEERTEDAMVGFRNFVA--RNANMQGTELTANDVANAVLF 249
           +N +SP    T GL      +  + +  +      V   R          A +VA A LF
Sbjct: 198 INTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVG-------RAEEVAAAALF 250

Query: 250 LASDEARYISGTNLMVDGGFTSV 272
           LASD++ +++G  L VDGG   V
Sbjct: 251 LASDDSSFVTGAELFVDGGSAQV 273

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  252 bits (645), Expect = 6e-84
 Identities = 78/268 (29%), Positives = 120/268 (44%), Gaps = 11/268 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPD-TF 69
            R   +VA+ITG + GIG +T  LF + GAKV I        ++      + G       
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD--IREADLSEFEKVFDIN 127
               DVT +      +  T+ KFG LDI+VNNAG +             +  ++   ++N
Sbjct: 62  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAEL 186
           ++ V    K A   +   TKG I++I S+A  +        Y+ +K A+    +N A +L
Sbjct: 122 LRSVIALTKKAVPHLS-STKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDL 180

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            ++GIRVN +SP  VATG   A    EE ++                 G      D+A  
Sbjct: 181 IQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP--AGVMGQPQDIAEV 238

Query: 247 VLFLASDE-ARYISGTNLMVDGGFTSVN 273
           + FLA  + + YI G  L+VDGG + + 
Sbjct: 239 IAFLADRKTSSYIIGHQLVVDGGSSLIM 266

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  250 bits (641), Expect = 2e-83
 Identities = 85/272 (31%), Positives = 113/272 (41%), Gaps = 20/272 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT------ 68
           +L GRVA ITG A G G +        GA +   D+   L   V        D       
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRL 67

Query: 69  --------FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSE 119
                        D    + +   VD  V   G LDI+V NAG++      DI   D   
Sbjct: 68  VEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPED--- 124

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           F  V DINV G ++ +   A  +I   + G+II I S AG         YT SKHAV GL
Sbjct: 125 FRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGL 184

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            +  AAELGK+ IRVN V P  V T +    +              + V     +     
Sbjct: 185 ARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF-LPDWVA 243

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGFT 270
              D+A+ V +LASDE+R ++   + VD G T
Sbjct: 244 EPEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  248 bits (635), Expect = 2e-82
 Identities = 73/265 (27%), Positives = 114/265 (43%), Gaps = 23/265 (8%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP---DTFF 70
             + G+VAL+TG A GIG +        GAKV + D     G Q   +L  +     T F
Sbjct: 3   HMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF 62

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
             CDV  ++ +       V+ FG LDI+VNNAG++        E +   +EK   IN+  
Sbjct: 63  IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN-------NEKN---WEKTLQINLVS 112

Query: 131 VFHGMKHAARIMIPQTKG---TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA--AE 185
           V  G       M  Q  G    II++ S+AG +       Y  SKH ++G  ++ A  A 
Sbjct: 113 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN 172

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
           L   G+R+N + P  V T + L  + +EE     +    +            L    +AN
Sbjct: 173 LMNSGVRLNAICPGFVNTAI-LESIEKEENMGQYIEYKDHIKDMIK--YYGILDPPLIAN 229

Query: 246 AVLFLASDEARYISGTNLMVDGGFT 270
            ++ L  D+A  ++G  + +     
Sbjct: 230 GLITLIEDDA--LNGAIMKITTSKG 252

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  247 bits (633), Expect = 2e-82
 Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 13/259 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
           RL  RVA++TGGA  IG + V    + GA+V IAD+ + +  +  + L  E  D      
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT  E V +AV    E+ G +DI+V  AGI  +      +    ++ K  DIN+ G+F 
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVK-AEDMTDGQWLKQVDINLNGMFR 128

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKYGI 191
             +   RIM+ Q +G I++I S++G I        AY  SK  V    +++AAE   +GI
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGI 188

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           R N V+P  + T L      E+    DA +             G     ++VA+ V FLA
Sbjct: 189 RANAVAPTYIETTL-TRFGMEKPELYDAWI--------AGTPMGRVGQPDEVASVVQFLA 239

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD A  ++G  + VD GFT
Sbjct: 240 SDAASLMTGAIVNVDAGFT 258

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  245 bits (629), Expect = 1e-81
 Identities = 75/276 (27%), Positives = 121/276 (43%), Gaps = 23/276 (8%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+++         + L  +VAL+T    GIG +  R   + GA V ++  +     +   
Sbjct: 1   MASTGVERR----KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVA 56

Query: 61  SLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
           +L GE        C V K ED    V + V   G +DI+V+NA ++      I +A    
Sbjct: 57  TLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGN-IIDATEEV 115

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
           ++K+  +NVK      K     M  +  G+++ + SV           Y  SK A+LGL 
Sbjct: 116 WDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLT 175

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL- 238
           KN+A EL    IRVNC++P  + T  +   L  ++  ++ M             +   + 
Sbjct: 176 KNLAVELAPRNIRVNCLAPGLIKTNFSQV-LWMDKARKEYM------------KESLRIR 222

Query: 239 ---TANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
                 D A  V FL S++A YI+G  ++V GG  S
Sbjct: 223 RLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTAS 258

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  244 bits (625), Expect = 5e-81
 Identities = 72/262 (27%), Positives = 108/262 (41%), Gaps = 26/262 (9%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           Q   G+VAL+TG A GIG + V      GA+V +AD           ++ G         
Sbjct: 24  QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADR----------AVAGIAADLHLPG 73

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           D+ +               G LDI+VNNAG+       +  +AD   +     +NV+  F
Sbjct: 74  DLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDAD---WSLSLGVNVEAPF 130

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              + A  +M     G I+++ S  G   G G   Y  +K A+  L + +  +    GIR
Sbjct: 131 RICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIR 190

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           +N V P  V T +      +     D         A     +   L       D+A+ VL
Sbjct: 191 INAVCPNEVNTPMLRTGFAKRGFDPDR--------AVAELGRTVPLGRIAEPEDIADVVL 242

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           FLASD ARY+ G+ + V+GG  
Sbjct: 243 FLASDAARYLCGSLVEVNGGKA 264

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  242 bits (620), Expect = 2e-80
 Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 15/262 (5%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
             L  +V +I+G    +G +  R   + GA + +A       + V       G       
Sbjct: 7   GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR--ALS 64

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D+T +  V   VD T++ +G +D+++NNA    +  P              ++ V G
Sbjct: 65  VGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKP-FANTTFEHMRDAIELTVFG 123

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
               ++     +  ++KG ++++ S+          AY  +K A+L +++ +A ELG+ G
Sbjct: 124 ALRLIQGFTPALE-ESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKG 182

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANA 246
           IRVN V P  +  G     L      +    G       NA   G++L    T ++VA+A
Sbjct: 183 IRVNSVLPGYIWGGT----LKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASA 238

Query: 247 VLFLASDEARYISGTNLMVDGG 268
           +LF+ASD A  I+G  L V+ G
Sbjct: 239 ILFMASDLASGITGQALDVNCG 260

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  242 bits (619), Expect = 2e-80
 Identities = 86/269 (31%), Positives = 129/269 (47%), Gaps = 26/269 (9%)

Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGE 65
           S  +   L   VA++TG A GIG +    F K GA V + D++    + V  ++   GG+
Sbjct: 3   SYESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK 62

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
                  C+VT E+   + +   +++FG + ++VNNAG  G    D+  +D   FE  F 
Sbjct: 63  --AIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSD---FEWAFK 117

Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           +N+  +F   + AA  M     G I++I S+AG    +   +Y  SK AV  L +N+A +
Sbjct: 118 LNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFD 177

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TAN 241
           +G  GIRVN ++P A+ T      L  E                 A ++ T L     A 
Sbjct: 178 VGPMGIRVNAIAPGAIKTDALATVLTPE--------------IERAMLKHTPLGRLGEAQ 223

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFT 270
           D+ANA LFL S  A +ISG  L V GG  
Sbjct: 224 DIANAALFLCSPAAAWISGQVLTVSGGGV 252

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  241 bits (618), Expect = 4e-80
 Identities = 80/271 (29%), Positives = 125/271 (46%), Gaps = 16/271 (5%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG 63
           + + D    V RL G+ ALITG   GIG    R F   GA++ ++    +      ++LG
Sbjct: 6   TTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALG 65

Query: 64  GEP--DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEF 120
            +   D      D+ + +          E FG LD++VNNAGIS   P  D        F
Sbjct: 66  EQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQL---F 122

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
           +    +N++          + M+   + G II++ S A        +AY  SK  ++   
Sbjct: 123 DATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMAT 182

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           K +A ELG +GIR N V P  V T +    +  +E     M+  R  + R A        
Sbjct: 183 KVLARELGPHGIRANSVCPTVVLTEM-GQRVWGDEAKSAPMIA-RIPLGRFA-------V 233

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFT 270
            ++V++AV++LASD A  I+G ++ VDGG+T
Sbjct: 234 PHEVSDAVVWLASDAASMINGVDIPVDGGYT 264

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  242 bits (620), Expect = 7e-80
 Identities = 80/292 (27%), Positives = 122/292 (41%), Gaps = 25/292 (8%)

Query: 1   MSNSNSTDSSPAV--QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV 58
           M    +    P     ++ G+VA ITG A G G S      + GA +   DV   L    
Sbjct: 9   MGTLEAQTQGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVK 68

Query: 59  ---------------CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG 103
                           ++LG          DV   + + +AVD  V + G LDI++ NA 
Sbjct: 69  LPMSTPDDLAETVRQVEALGRR--IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAA 126

Query: 104 ISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI-PQTKGTIISICSVAGAIGG 162
           ++      +   D   +  + D+N+ G +   + A   ++  +  G+I+   S+ G  G 
Sbjct: 127 LASEGTR-LNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA 185

Query: 163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG 222
                Y  SKH + GL + +A ELG   IRVN V P +VAT + L          D    
Sbjct: 186 ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENP 245

Query: 223 FRNFVARNANMQGTE----LTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                   +          +   D++NA+LFL SD+ARYI+G +L VDGG  
Sbjct: 246 TVEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL 297

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  241 bits (618), Expect = 9e-80
 Identities = 74/272 (27%), Positives = 116/272 (42%), Gaps = 21/272 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT------ 68
            L GRVA ITG A G G S        GA +   D+   +   V  +     D       
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 69  --------FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSE 119
                        DV  +  +   V   +E+FG LD++V NAG+       ++ +     
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQ--- 128

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           ++ V  +N+ G +  ++     MI     G+I+ + S AG     G   Y+ SKH +  L
Sbjct: 129 WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTAL 188

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
              +A ELG+YGIRVN + PY+V T + +      E          +F           +
Sbjct: 189 TNTLAIELGEYGIRVNSIHPYSVETPM-IEPEAMMEIFARHPSFVHSFPPMPV-QPNGFM 246

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           TA++VA+ V +LA D +  ++GT + VD G  
Sbjct: 247 TADEVADVVAWLAGDGSGTLTGTQIPVDKGAL 278

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  239 bits (613), Expect = 1e-79
 Identities = 69/258 (26%), Positives = 119/258 (46%), Gaps = 24/258 (9%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
               L+TGG+ GIG++ V L  ++     I  D+Q +   +  +         F   D+T
Sbjct: 4   MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLK---------FIKADLT 54

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
           K++D+ + +D  + K  + D +  NAGI       I + D+   +KV D+NV    + +K
Sbjct: 55  KQQDITNVLD--IIKNVSFDGIFLNAGILIKG--SIFDIDIESIKKVLDLNVWSSIYFIK 110

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
                +  +   +I+   S    I      AYT SK A+  + K++A +L KY IRVN V
Sbjct: 111 GLENNL--KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTV 168

Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLAS 252
            P  V T L    + +         G     A+    +   L       ++A  V+FL S
Sbjct: 169 CPGTVDTDLYRNLIQKYANNV----GISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLS 224

Query: 253 DEARYISGTNLMVDGGFT 270
           D++++++G  + +DGG+T
Sbjct: 225 DKSKFMTGGLIPIDGGYT 242

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  239 bits (612), Expect = 4e-79
 Identities = 77/273 (28%), Positives = 116/273 (42%), Gaps = 18/273 (6%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGA-TGIGESTVRLFHKHGAKVCIADVQDNLGQQVC 59
           M+ S +         L G+V L+T  A TGIG +T R     GA V I+D  +    +  
Sbjct: 5   MNLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETR 64

Query: 60  QSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREAD 116
             L   G        CDVT  E V + +  TVEK G LD++VNNAG+ G  P  D+ + +
Sbjct: 65  DQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEE 124

Query: 117 LSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
              +++V ++ +  V    + A R        G I++  SV G         Y  +K  V
Sbjct: 125 ---WDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGV 181

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           + L +  A E  ++G+R+N VSP              E    D +        R A    
Sbjct: 182 MALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELL--DRLAS-DEAFGRAA---- 234

Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGG 268
                 +VA  + FLASD + Y++G  + V   
Sbjct: 235 ---EPWEVAATIAFLASDYSSYMTGEVVSVSSQ 264

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  239 bits (613), Expect = 8e-79
 Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 9/265 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFC 71
           R  G+  +ITG + GIG S   +F K GA+V I    ++  ++        G   +    
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82

Query: 72  H-CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DVT+       ++ T+ KFG +DI+VNNAG + A      +  +  ++K F +N + 
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142

Query: 131 VFHGMKHAARIMIPQTKGTIISICS-VAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           V    +     +I +TKG I+++ S VAG     G   Y  +K A+    +  A +L ++
Sbjct: 143 VIEMTQKTKEHLI-KTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+RVN VSP AVATG   A    E  ++       +         G      ++AN ++F
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP--VGHCGKPEEIANIIVF 259

Query: 250 LAS-DEARYISGTNLMVDGGFTSVN 273
           LA  + + YI G +++ DGG T V 
Sbjct: 260 LADRNLSSYIIGQSIVADGGSTLVM 284

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  238 bits (610), Expect = 1e-78
 Identities = 79/290 (27%), Positives = 118/290 (40%), Gaps = 46/290 (15%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ---------------QVC 59
           R+  +V L+TGGA G G S      + GA + + D+  ++                    
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66

Query: 60  QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
           +  G +   +    DV     V   +   V +FG LD++V NAGI    CP      +  
Sbjct: 67  EKTGRK--AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGI----CPLGAHLPVQA 120

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHAY 168
           F   FD++  GV + +  A   +      +II+  SVAG I            G G   Y
Sbjct: 121 FADAFDVDFVGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGY 178

Query: 169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL--------ALAHLPEEERTEDAM 220
           + +K  V      +AA+L    IR N + P  V T +              E     DA+
Sbjct: 179 SYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADAL 238

Query: 221 VGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           + F    A    M    + A+D++NAV FLASDE+RY++G    VD G  
Sbjct: 239 LAFPAMQA----MPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAM 284

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  236 bits (605), Expect = 4e-78
 Identities = 77/267 (28%), Positives = 120/267 (44%), Gaps = 28/267 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQV---CQSLGGEPDTF 69
           + L G+V +ITG +TG+G+S    F    AKV +      +    V    + +GGE    
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE--AI 60

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINV 128
               DVT E DV + V   +++FG LD+M+NNAG+       ++  +D   + KV D N+
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD---WNKVIDTNL 117

Query: 129 KGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
            G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + + +A E  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDV 243
             GIRVN + P A+ T +  A    +      +                 +       ++
Sbjct: 178 PKGIRVNNIGPGAINTPI-NAEKFADPEQRADV------------ESMIPMGYIGEPEEI 224

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFT 270
           A    +LAS EA Y++G  L  DGG T
Sbjct: 225 AAVAAWLASSEASYVTGITLFADGGMT 251

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  236 bits (604), Expect = 7e-78
 Identities = 91/262 (34%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L GR A++TGG+ GIG +  R   K GA V IAD+     Q V   L      F    D
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENG--GFAVEVD 66

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           VTK   V +A+   ++  G  D++  NAG+S   P  DI + +   ++  FD+N +GVF 
Sbjct: 67  VTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEE---WDFNFDVNARGVFL 123

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             + A R  +   TKG I++  S+A  +G      Y+ SK AV G  + +A E+    IR
Sbjct: 124 ANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIR 183

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           VNCV P  V T    A    E   E  + G      R   +  T L       DVA+ V+
Sbjct: 184 VNCVCPGFVKT----AMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVV 239

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           FLASD AR+++G  + V GG  
Sbjct: 240 FLASDAARFMTGQGINVTGGVR 261

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  236 bits (604), Expect = 9e-78
 Identities = 84/276 (30%), Positives = 118/276 (42%), Gaps = 29/276 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---------------C 59
            L G+VA ITG A G G +        GA +   D+ D +                    
Sbjct: 10  PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV 69

Query: 60  QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
           + +G          DV   E + +A+   +++ G LDI+V NAGI+         A    
Sbjct: 70  EDIGSR--IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPM------SAGDDG 121

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPH----AYTGSKHA 174
           +  V D+N+ GV+H +K A   ++ Q T G+I+ I S AG  G          Y  +KH 
Sbjct: 122 WHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHG 181

Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           V+GL +  A  L    IRVN + P  V T + + +    E             A    M 
Sbjct: 182 VVGLMRVYANLLAGQMIRVNSIHPSGVETPM-INNEFTREWLAKMAAATDTPGAMGNAMP 240

Query: 235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
              L   DVANAV +L SD+ARYI+G  L VD GF 
Sbjct: 241 VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL 276

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  235 bits (603), Expect = 1e-77
 Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 11/268 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPD-TF 69
            R   +  +ITG + GIG +T  LF + GA V I        ++        G       
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDIN 127
               DVT E+     ++ T+++FG +D++VNNAG +   A      +  +  + K   +N
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 121

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICS-VAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
           ++ V    K     ++  +KG I+++ S VAG         Y  +K A+    ++ A +L
Sbjct: 122 LQAVIEMTKKVKPHLV-ASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDL 180

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            K+GIRVN VSP  V TG     +   ++       F         + G       +AN 
Sbjct: 181 AKFGIRVNSVSPGMVETGF-TNAMGMPDQASQKFYNFMASHKECIPI-GAAGKPEHIANI 238

Query: 247 VLFLASDEA-RYISGTNLMVDGGFTSVN 273
           +LFLA      YI G +++ DGG + V 
Sbjct: 239 ILFLADRNLSFYILGQSIVADGGTSLVM 266

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  235 bits (601), Expect = 1e-77
 Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 25/267 (9%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPD 67
           P   R   +V ++TG   GIG++      + GA V +AD+     + V     + GG   
Sbjct: 2   PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT-- 59

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG----APCPDIREADLSEFEKV 123
                 DV+  E   +  D T+ +FG +D +VNNA I G         I       ++K 
Sbjct: 60  AISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEY---YKKF 116

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
             +N+ G     +   + M  +  G I++  S A  +       Y  +K  + GL + ++
Sbjct: 117 MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLS 173

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            ELG   IR+N ++P  + T       P+E    D +V     ++R         T +D+
Sbjct: 174 RELGGRNIRINAIAPGPIDTEANRTTTPKEMV--DDIVK-GLPLSRMG-------TPDDL 223

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFT 270
               LFL SDEA +I+G    VDGG  
Sbjct: 224 VGMCLFLLSDEASWITGQIFNVDGGQI 250

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  235 bits (601), Expect = 2e-77
 Identities = 59/264 (22%), Positives = 107/264 (40%), Gaps = 14/264 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP---DTFFC 71
            L   VA++TGG++GIG +TV L  + GA V          +    +L         F  
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKG 130
            CDV     V +  +      G   I+VNNAG    +   +  +     + +   +    
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEA---WSEELQLKFFS 121

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           V H ++     +  +    I+ + S+  +       A + ++  V  L +++A E    G
Sbjct: 122 VIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKG 181

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANA 246
           +RVN +    V +G       E     +  + +  + A+ A  +   L       + A A
Sbjct: 182 VRVNGILIGLVESGQ-WRRRFEARE--ERELDWAQWTAQLARNKQIPLGRLGKPIEAARA 238

Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
           +LFLAS  + Y +G+++ V GG +
Sbjct: 239 ILFLASPLSAYTTGSHIDVSGGLS 262

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  234 bits (600), Expect = 3e-77
 Identities = 69/283 (24%), Positives = 115/283 (40%), Gaps = 26/283 (9%)

Query: 1   MSNSNSTDSSPAVQ---RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ 57
           M  S  +  +   +    L G  AL+TGG+ GIG + V      GA+V      +    +
Sbjct: 1   MEESKVSMMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDE 60

Query: 58  V---CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTLDIMVNNAGIS-GAPCPDI 112
                +  G         CD+    +    +      F G L+I+VNNAG+       D 
Sbjct: 61  CLEIWREKGLN--VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDF 118

Query: 113 READLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK 172
            E D   +  +   N +  +H  + A  ++     G +I + S+AG         Y+ SK
Sbjct: 119 TEKD---YNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK 175

Query: 173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
            A+  + K++A E  K  IRVN V+P  + T L    + +    ++ +  F         
Sbjct: 176 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNF--------- 226

Query: 233 MQGTEL----TANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
           +  T +       +V+  + FL    A YI+G  +  DGGFT+
Sbjct: 227 IVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTA 269

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  233 bits (597), Expect = 4e-77
 Identities = 80/259 (30%), Positives = 116/259 (44%), Gaps = 16/259 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCH 72
           QRL  ++A+ITGGA GIG +    F   GA + IAD+      +   ++LG         
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRR--VLTVK 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGV 131
           CDV++  DV +     +  FG  DI+VNNAGI    P  ++       ++K F+INV   
Sbjct: 61  CDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQ---WKKTFEINVDSG 117

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F   K     M     G II++ S    +       Y  +K A +G  + +A++LGK GI
Sbjct: 118 FLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGI 177

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            VN ++P  V T              D +      + R            D+  A  FLA
Sbjct: 178 TVNAIAPSLVRTAT-TEASALSAM-FDVLPNMLQAIPRLQ-------VPLDLTGAAAFLA 228

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD+A +I+G  L VDGG  
Sbjct: 229 SDDASFITGQTLAVDGGMV 247

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  233 bits (598), Expect = 4e-77
 Identities = 84/261 (32%), Positives = 121/261 (46%), Gaps = 14/261 (5%)

Query: 17  VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFCHC 73
           + +VAL+TG   GIG++      K G  V IAD  D   + V       GG         
Sbjct: 1   MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH--AVAVKV 58

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           DV+  + V +AV+   +  G  D++VNNAG++   P   I        +KV++INVKGV 
Sbjct: 59  DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEI---VDKVYNINVKGVI 115

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            G++ A      +   G II+ CS AG +G      Y+ SK AV GL +  A +L   GI
Sbjct: 116 WGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGI 175

Query: 192 RVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            VN   P  V T +   +     E   +    G   F  R     G      DVA  V +
Sbjct: 176 TVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRIT--LGRLSEPEDVAACVSY 233

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LAS ++ Y++G +L++DGG  
Sbjct: 234 LASPDSDYMTGQSLLIDGGMV 254

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  233 bits (597), Expect = 6e-77
 Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 16/262 (6%)

Query: 17  VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-----QVCQSLGGEPDTFFC 71
           + +VA++TGGA GIG          G  + +AD+     Q     ++ ++   +    F 
Sbjct: 1   MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK--AVFV 58

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKG 130
             DVT + +  SA+D   EK G  D++VNNAGI+   P  ++ E D    ++++ +NV  
Sbjct: 59  GLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEED---LKQIYSVNVFS 115

Query: 131 VFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           VF G++ A+R       KG II+  S+A   G     AY+ +K AV GL +  A EL   
Sbjct: 116 VFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPK 175

Query: 190 GIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           G  VN  +P  V TG+   +     +   +     F+ + +  A   G      DVA  V
Sbjct: 176 GHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIA--LGRPSVPEDVAGLV 233

Query: 248 LFLASDEARYISGTNLMVDGGF 269
            FLAS+ + Y++G  ++VDGG 
Sbjct: 234 SFLASENSNYVTGQVMLVDGGM 255

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  233 bits (596), Expect = 7e-77
 Identities = 73/260 (28%), Positives = 117/260 (45%), Gaps = 18/260 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
               G+ A++ GG  G+G +TVR   + GA+V +    ++   ++ +  G          
Sbjct: 4   GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPR--VHALRS 61

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           D+    ++        +  G +D++  NAG+S   P   + EA    +++ F +N KG F
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEAS---YDRQFAVNTKGAF 118

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             ++    ++  +  G+I+   SVA   G  G   Y+ SK A++     +AAEL   GIR
Sbjct: 119 FTVQRLTPLI--REGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIR 176

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA--RNANMQGTELTANDVANAVLFL 250
           VN VSP  + T         E    +      N     RN        TA++VA AVLFL
Sbjct: 177 VNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNG-------TADEVARAVLFL 229

Query: 251 ASDEARYISGTNLMVDGGFT 270
           A + A + +G  L VDGG  
Sbjct: 230 AFE-ATFTTGAKLAVDGGLG 248

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  232 bits (595), Expect = 1e-76
 Identities = 59/267 (22%), Positives = 104/267 (38%), Gaps = 25/267 (9%)

Query: 8   DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----G 63
              P    L  R+ L+TG + GIG      + ++GA V +    +   +QV   +    G
Sbjct: 2   HYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG 61

Query: 64  GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV 123
            +P  F         E+           +  LD +++NAG+ G  CP + E +   ++ V
Sbjct: 62  RQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-MSEQNPQVWQDV 120

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
             +NV   F   +    +++    G+++   S  G  G     AY  SK A  G+ + +A
Sbjct: 121 MQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA 180

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            E  +  +RVNC++P    T +  +  P E+              +         T  D+
Sbjct: 181 DEYQQ-RLRVNCINPGGTRTAMRASAFPTED------------PQKLK-------TPADI 220

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFT 270
               L+L  D++R  +G       G  
Sbjct: 221 MPLYLWLMGDDSRRKTGMTFDAQPGRK 247

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  229 bits (586), Expect = 4e-75
 Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 18/253 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +   ++A++TG  +G+G +        G  V +A  + +  Q+    +G +        D
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDD--ALCVPTD 82

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT  + V +    TVEKFG +D++ NNAG      P + +   +++++V D N+ G F  
Sbjct: 83  VTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIP-MEDLTFAQWKQVVDTNLTGPFLC 141

Query: 135 MKHAARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            + A R+M  Q    G II+  S++          YT +KHA+ GL K+ + +   + I 
Sbjct: 142 TQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIA 201

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
              +      T +A   +       D  +                +    VA+AV+++AS
Sbjct: 202 CGQIDIGNADTPMA-QKMKAGVPQADLSI-----------KVEPVMDVAHVASAVVYMAS 249

Query: 253 D-EARYISGTNLM 264
                 +    +M
Sbjct: 250 LPLDANVQFMTIM 262

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  225 bits (577), Expect = 4e-74
 Identities = 71/258 (27%), Positives = 116/258 (44%), Gaps = 21/258 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L GR  L+TG   GIG  TV+  H  GA+V            + +   G         D
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG---IEPVCVD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFH 133
           +   E    A +  +   G +D++VNNA ++   P  ++ +     F++ F++N++ V  
Sbjct: 61  LGDWE----ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEA---FDRSFEVNLRAVIQ 113

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +  AR +I +   G I+++ S            Y  +K A+  L K +A ELG + IR
Sbjct: 114 VSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIR 173

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN V+P  V T +  A   +  + +  M+  R  + + A           V NA+LFL S
Sbjct: 174 VNAVNPTVVMTSMGQATWSDPHKAK-TMLN-RIPLGKFA-------EVEHVVNAILFLLS 224

Query: 253 DEARYISGTNLMVDGGFT 270
           D +   +G+ L V+GGF 
Sbjct: 225 DRSGMTTGSTLPVEGGFW 242

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  225 bits (577), Expect = 7e-74
 Identities = 77/259 (29%), Positives = 121/259 (46%), Gaps = 17/259 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G  A +TG  +GIG    R F   GA++ + D +     +  Q LG          D
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAA-VAARIVAD 66

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFH 133
           VT  E + +A     E    + I+VN+AGI+      +  +A    + +V  +NV G+F 
Sbjct: 67  VTDAEAMTAAAA-EAEAVAPVSILVNSAGIARLHDALETDDAT---WRQVMAVNVDGMFW 122

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKYGI 191
             +   R M+ +  G I+++ S++G I        +Y  SK AV  L + +AAE    G+
Sbjct: 123 ASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGV 182

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN ++P  VAT +    + E     +  +     + R           +++A A LFLA
Sbjct: 183 RVNALAPGYVATEMT-LKMRERPELFETWLD-MTPMGRCG-------EPSEIAAAALFLA 233

Query: 252 SDEARYISGTNLMVDGGFT 270
           S  A Y++G  L VDGG+T
Sbjct: 234 SPAASYVTGAILAVDGGYT 252

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  225 bits (575), Expect = 8e-74
 Identities = 70/259 (27%), Positives = 121/259 (46%), Gaps = 21/259 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
              G  AL+TG   GIG  TV+  H  GAKV      ++    + +   G         D
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG---IEPVCVD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFH 133
           +   +    A +  +   G +D++VNNA +    P  ++ +     F++ F +N++ VF 
Sbjct: 61  LGDWD----ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEA---FDRSFSVNLRSVFQ 113

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +  AR MI +   G+I+++ S+   +       Y+ +K A+  L K +A ELG + IR
Sbjct: 114 VSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIR 173

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN V+P  V T +      + E     +   R+ + + A ++       DV N++LFL S
Sbjct: 174 VNSVNPTVVLTDMGKKVSADPEFAR-KLKE-RHPLRKFAEVE-------DVVNSILFLLS 224

Query: 253 DEARYISGTNLMVDGGFTS 271
           D +   SG  ++VD G+ +
Sbjct: 225 DRSASTSGGGILVDAGYLA 243

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  225 bits (576), Expect = 1e-73
 Identities = 71/266 (26%), Positives = 107/266 (40%), Gaps = 24/266 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFC 71
            L G  AL+TGG+ GIG   V      GA V                 +S G +      
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK--VEAS 63

Query: 72  HCDVTKEEDVCSAVDLTVEKF-GTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
            CD++   +    ++     F G L+I+VNNAGI       D    D   +  +  IN +
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVED---YSLIMSINFE 120

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             +H    A   +    +G ++ I SV+GA+       Y  +K A+  L + +A E  K 
Sbjct: 121 AAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD 180

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVAN 245
            IRVN V P  +AT L    + + E+ E            N  +    L       ++A 
Sbjct: 181 NIRVNGVGPGVIATSLVEMTIQDPEQKE----------NLNKLIDRCALRRMGEPKELAA 230

Query: 246 AVLFLASDEARYISGTNLMVDGGFTS 271
            V FL    A Y++G  + VDGG  +
Sbjct: 231 MVAFLCFPAASYVTGQIIYVDGGLMA 256

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  225 bits (576), Expect = 1e-73
 Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 28/261 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+  L+TG A+GIG + + LF + GA +   D ++ L  +   +L  E        D
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE--AIAVVAD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           V+  + V +     +E+FG L  + + AG++  A   ++       +EKV  +N+ G F 
Sbjct: 61  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEA---WEKVLRVNLTGSFL 117

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + A  ++  +  G+++   SVAG +G  G   Y   K  V+GL + +A EL + G+RV
Sbjct: 118 VARKAGEVL--EEGGSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVRV 174

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLF 249
           N + P  + T +  A LP                A    +  + L       +VA A LF
Sbjct: 175 NVLLPGLIQTPM-TAGLPPW--------------AWEQEVGASPLGRAGRPEEVAQAALF 219

Query: 250 LASDEARYISGTNLMVDGGFT 270
           L S+E+ YI+G  L VDGG +
Sbjct: 220 LLSEESAYITGQALYVDGGRS 240

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  225 bits (576), Expect = 2e-73
 Identities = 61/265 (23%), Positives = 119/265 (44%), Gaps = 27/265 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFC 71
            L G+VA +TG + GIG +    + + GA V I        ++        G    +   
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH--SKAY 88

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            C+++  + V   +    + FGT+D+ V NAG++    P+I   +   + K+  +++ GV
Sbjct: 89  KCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGV 148

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKY 189
           ++   +  +I     KG++I   S++G I  +      Y  +K A   L K++A E   +
Sbjct: 149 YYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPF 208

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVAN 245
             RVN +SP  + T +      ++               +    Q T L       ++  
Sbjct: 209 A-RVNTISPGYIDTDIT-DFASKD--------------MKAKWWQLTPLGREGLTQELVG 252

Query: 246 AVLFLASDEARYISGTNLMVDGGFT 270
             L+LAS+ + + +G+++++DGG+T
Sbjct: 253 GYLYLASNASTFTTGSDVVIDGGYT 277

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  225 bits (575), Expect = 2e-73
 Identities = 84/263 (31%), Positives = 129/263 (49%), Gaps = 24/263 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFC 71
            L G+ ALITG +TGIG+     + + GA+V +A    +  Q V   +   GG+      
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK--ALPI 86

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKG 130
            CDVT+ + V   +D    + G +DI V NAGI       D+   +   F+++ D NV G
Sbjct: 87  RCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEE---FQRIQDTNVTG 143

Query: 131 VFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELG 187
           VF   + AAR M+ Q   GTII+  S++G I  +      Y  SK AV+ L K +A EL 
Sbjct: 144 VFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELA 203

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
            + IRVN VSP  + T L    L +           +  + R            ++    
Sbjct: 204 PHQIRVNSVSPGYIRTELV-EPLAD---YHALWEP-KIPLGRMG-------RPEELTGLY 251

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
           L+LAS  + Y++G+++++DGG+T
Sbjct: 252 LYLASAASSYMTGSDIVIDGGYT 274

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  225 bits (575), Expect = 2e-73
 Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 18/265 (6%)

Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-- 66
            +       GR+AL+TGG TG+G    +     G  V I   + ++       +GG    
Sbjct: 24  MAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN 83

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDI 126
                 CDV   + V +       +F  LD++VNNAG +  P P + E    ++  +   
Sbjct: 84  IVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVP-LEEVTFEQWNGIVAA 142

Query: 127 NVKGVFHGMKHAARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           N+ G F   +HA R+M  QT   G II+  S++          YT +KHA+ GL K+ A 
Sbjct: 143 NLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTAL 202

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           +   + I    +     AT +  A +       +  V                +    +A
Sbjct: 203 DGRMHDIACGQIDIGNAATDMT-ARMSTGVLQANGEV-----------AAEPTIPIEHIA 250

Query: 245 NAVLFLASDEAR-YISGTNLMVDGG 268
            AV+++AS      +    +M    
Sbjct: 251 EAVVYMASLPLSANVLTMTVMATRM 275

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  222 bits (569), Expect = 7e-73
 Identities = 43/256 (16%), Positives = 80/256 (31%), Gaps = 20/256 (7%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
            +AL+T      G + V    + G  V   D       +  +     P           E
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENP-----GTIALAE 56

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAP-CPDIREADLSEFEKVFDINVKGVFHGMKH 137
           +     VD T++    +D +V+N  I        +     ++  ++F+         ++ 
Sbjct: 57  QKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQS 116

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
           A   +      ++I I S  G         Y  ++ A + L ++ A  L + GI +  + 
Sbjct: 117 AIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIG 176

Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLASD 253
           P                          N   R    +   L      +++   + FLAS 
Sbjct: 177 PNFFNN----------PTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASR 226

Query: 254 EARYISGTNLMVDGGF 269
            A  I G      GG+
Sbjct: 227 RAAPIVGQFFAFTGGY 242

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  222 bits (568), Expect = 1e-72
 Identities = 71/261 (27%), Positives = 106/261 (40%), Gaps = 22/261 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
              G+   +TG   GIG +T   F + GAKV   D                  T     D
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAF-------TQEQYPFATE--VMD 54

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFH 133
           V     V       + +   LD +VN AGI        + + D   +++ F +NV G F+
Sbjct: 55  VADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKED---WQQTFAVNVGGAFN 111

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +        Q  G I+++ S A     +G  AY  SK A+  L  +V  EL   G+R 
Sbjct: 112 LFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRC 171

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLF 249
           N VSP +  T +    L   +  E+  +             G  L       ++AN +LF
Sbjct: 172 NVVSPGSTDTDM-QRTLWVSDDAEEQRIR----GFGEQFKLGIPLGKIARPQEIANTILF 226

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LASD A +I+  +++VDGG T
Sbjct: 227 LASDLASHITLQDIVVDGGST 247

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  223 bits (571), Expect = 1e-72
 Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 24/270 (8%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGEP--DTFF 70
           Q ++ + A+ITG  +GIG +  R   K GA + +      +  + V   + G        
Sbjct: 21  QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH 80

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVK 129
              D+TK  ++   + +  ++FG  DI+VNNAG+       D        ++++  +N+ 
Sbjct: 81  HPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQ---WDRIIAVNLS 137

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             FH ++ A   M  +  G II+I S  G +      AY  +KH ++GL K VA E+ + 
Sbjct: 138 SSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAES 197

Query: 190 GIRVNCVSPYAVATGL---------ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           G+ VN + P  V T L             + EE+   + M      +          +T 
Sbjct: 198 GVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVM------LKGQP--TKKFITV 249

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFT 270
             VA+  L+LA D+A  I+GT++ +DGG+T
Sbjct: 250 EQVASLALYLAGDDAAQITGTHVSMDGGWT 279

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  224 bits (572), Expect = 2e-72
 Identities = 81/278 (29%), Positives = 121/278 (43%), Gaps = 28/278 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ---------------QVC 59
           RL G+VA ITG A G G +      + GA +   D+                     ++ 
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102

Query: 60  QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
           +  G          DV     + + VD  + +FG +DI+V+N GI            L++
Sbjct: 103 EEQGRR--IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGI----SNQGEVVSLTD 156

Query: 120 --FEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVL 176
             +  +   N+ G +H  +     MI + + G++I + S  G  G  G   Y  SKH V 
Sbjct: 157 QQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQ 216

Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT 236
           GL  ++A E+G++ IRVN V+P AV T +AL     +          R   A   +    
Sbjct: 217 GLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTL 276

Query: 237 E----LTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                +   DV+NAV +LASDEARYI G  + VDGG  
Sbjct: 277 LPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  222 bits (567), Expect = 2e-72
 Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 25/266 (9%)

Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV--- 58
           S+ +  D    +  L G+VA++TG + GIG +  R     GA+V +        + V   
Sbjct: 13  SSGHIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVERE 72

Query: 59  CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS 118
             + GGE       CD++  + + +     +   G  D++VNNAG+     P       +
Sbjct: 73  IVAAGGE--AESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHT-MKPA 129

Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           E++ +  +N+K  +  ++  A  MI   +G II+I S+AG        AYT SK  + GL
Sbjct: 130 EWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGL 189

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
             + A EL ++ +RV+ V+P +V T      L  ++    A                  +
Sbjct: 190 MTSAAEELRQHQVRVSLVAPGSVRTEFG-VGLSAKKSALGA------------------I 230

Query: 239 TANDVANAVLFLASDEARYISGTNLM 264
             +D+A+ V  LA+   +      L+
Sbjct: 231 EPDDIADVVALLATQADQSFISEVLV 256

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  220 bits (564), Expect = 4e-72
 Identities = 70/257 (27%), Positives = 110/257 (42%), Gaps = 7/257 (2%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCD 74
           L G+ AL+TG  +GIG    ++  + GA + +    D           G +        D
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVK--AVHHPAD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           ++    + +   L   +FG +DI+VNNAGI   AP           ++K+  +N+  VFH
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLES---WDKIIALNLSAVFH 116

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           G + A   M  +  G II+I SV G +G  G  AY  +KH V+GL K V  E     +  
Sbjct: 117 GTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTC 176

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N + P  V T L    + +        +  ++ +          +T   +   VLFL S+
Sbjct: 177 NAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSE 236

Query: 254 EARYISGTNLMVDGGFT 270
               + G    VDGG+ 
Sbjct: 237 AGSQVRGAAWNVDGGWL 253

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  220 bits (564), Expect = 1e-71
 Identities = 72/277 (25%), Positives = 109/277 (39%), Gaps = 27/277 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ---------------QVC 59
              G+ ALITGGA G+G S      + GA + I D  +N                   + 
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66

Query: 60  QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
           +  G    +     DV     + S V    +  G +DI + NAGI           ++  
Sbjct: 67  EKTGRRCISA--KVDVKDRAALESFVAEAEDTLGGIDIAITNAGI----STIALLPEVES 120

Query: 120 --FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG 177
             +++V   N+ G F+ +   A  MI +  G I+++ S+ G        +Y  SK  V+G
Sbjct: 121 AQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIG 180

Query: 178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--- 234
           L K  A +L  YGI VN V+P  + T +            D        V          
Sbjct: 181 LTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQ 240

Query: 235 -GTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
               L   +V  AVLFL  + + +I+GT L +D G T
Sbjct: 241 YAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  220 bits (563), Expect = 1e-71
 Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)

Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT 68
           S   +++  G  A+++GGA G+GE+TVR  H  G  V IAD+    G+ +   LG     
Sbjct: 21  SMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNR--A 78

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP---DIREADLSEFEKVFD 125
            F   +VT E+ V +A++   +       +V + G   A      D   AD+  F K  D
Sbjct: 79  EFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTID 138

Query: 126 INVKGVFHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
           + + G ++  +  A  +          +G ++   S+AG  G +G  AY  +K  V+GL 
Sbjct: 139 LYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLT 198

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
              A +L   GIRVN ++P  + T + +  + EE            F  R         T
Sbjct: 199 IAAARDLSSAGIRVNTIAPGTMKTPI-MESVGEEAL--AKFAANIPFPKRLG-------T 248

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
            ++ A+A  FL ++   YI+G  + +DG 
Sbjct: 249 PDEFADAAAFLLTN--GYINGEVMRLDGA 275

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  219 bits (561), Expect = 2e-71
 Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 19/263 (7%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
             +  +V +ITGG++G+G+     F K GA+V I        ++     +   G+     
Sbjct: 2   NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ--ILT 59

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
              DV   +D+   ++   EKFG +DI++NNA  +   P  D+       +  V +I + 
Sbjct: 60  VQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNG---WNSVINIVLN 116

Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG- 187
           G F+  +   +  I +  KG II++ +      G G      +K  VL + K +A E G 
Sbjct: 117 GTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGR 176

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           KYGIRVN ++P  +        L   E      +     + R    +       ++A   
Sbjct: 177 KYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQ-SVPLGRLGTPE-------EIAGLA 228

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
            +L SDEA YI+GT + +DGG  
Sbjct: 229 YYLCSDEAAYINGTCMTMDGGQH 251

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  218 bits (558), Expect = 4e-71
 Identities = 63/262 (24%), Positives = 102/262 (38%), Gaps = 25/262 (9%)

Query: 7   TDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---- 62
            D S   + L GRV L+TG A GIG +  R +  HGA V +    +    +V   +    
Sbjct: 3   FDYSAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG 62

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK 122
             +P     + +    +           +FG LD +++NA I G   P + +    +F +
Sbjct: 63  QPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTP-LEQLPDEDFMQ 121

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           V  +NV   F   +    ++      +I    S  G  G     AY  SK A  GL + +
Sbjct: 122 VMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTL 181

Query: 183 AAEL-GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           A EL G   +R N ++P A  TG+     P+    E+ +                     
Sbjct: 182 ADELEGVTAVRANSINPGATRTGMRAQAYPD----ENPL---------------NNPAPE 222

Query: 242 DVANAVLFLASDEARYISGTNL 263
           D+    L+L   ++  I+G  L
Sbjct: 223 DIMPVYLYLMGPDSTGINGQAL 244

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  218 bits (559), Expect = 4e-71
 Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 28/265 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFC 71
            L  +  L+TGG  GIG + V  F   GA +      +    +     Q  G +      
Sbjct: 11  SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ--VTGS 68

Query: 72  HCDVTKEEDVCSAVDLTVEKFG-TLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
            CD +   +    +      FG  LDI++NN G     P  D    D   F      N++
Sbjct: 69  VCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAED---FSFHISTNLE 125

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             +H  + A  ++     G II + S+AG +       Y+ +K A+  L +N+A E    
Sbjct: 126 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD 185

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVAN 245
           GIR N V+P  +AT LA   + ++E              +   +    L       +V++
Sbjct: 186 GIRANAVAPAVIATPLA-EAVYDDE-------------FKKVVISRKPLGRFGEPEEVSS 231

Query: 246 AVLFLASDEARYISGTNLMVDGGFT 270
            V FL    A YI+G  + VDGG T
Sbjct: 232 LVAFLCMPAASYITGQTICVDGGLT 256

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  217 bits (556), Expect = 7e-71
 Identities = 55/255 (21%), Positives = 110/255 (43%), Gaps = 11/255 (4%)

Query: 17  VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG--QQVCQSLGGEPDTFFCHCD 74
           +G+V L+TG + GIG+S V +         +  V  +    +++ +  G     F+   D
Sbjct: 1   MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRF--FYVVGD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +T++  +   V+  V+  G +D +V NAG+   P  ++ E D++ ++K++DIN   +   
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLE-PVQNVNEIDVNAWKKLYDINFFSIVSL 117

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +  A   +  +T G ++ + S A  +      AY  SK A+      +A E  +  ++  
Sbjct: 118 VGIALPELK-KTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAI 174

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V+P  V T +   ++ E      +M   +  + R        L ++  A     LA   
Sbjct: 175 AVAPGIVDTDMQ-VNIRENVG-PSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHG 232

Query: 255 -ARYISGTNLMVDGG 268
               ++G  L  +  
Sbjct: 233 IPDGVNGQYLSYNDP 247

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  216 bits (554), Expect = 2e-70
 Identities = 65/262 (24%), Positives = 103/262 (39%), Gaps = 27/262 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQ---SLGGEPDTFFC 71
              + AL+TG + G+G++      ++G  + I   +      +  +    LG +      
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK--VLVV 59

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKG 130
             +V +   +        E FG LD+ VNNA      P  ++ E     ++   +IN K 
Sbjct: 60  KANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETH---WDWTMNINAKA 116

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           +    + AA++M     G I+SI S+              SK A+  L + +A EL    
Sbjct: 117 LLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQ 176

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANA 246
           I VN VS  A+ T   L H P  E   +               Q T         D+ + 
Sbjct: 177 IIVNAVSGGAIDTDA-LKHFPNREDLLEDA------------RQNTPAGRMVEIKDMVDT 223

Query: 247 VLFLASDEARYISGTNLMVDGG 268
           V FL S +A  I G  ++VDGG
Sbjct: 224 VEFLVSSKADMIRGQTIIVDGG 245

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  218 bits (557), Expect = 2e-70
 Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 15/259 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCHC 73
             G+VA ITGG TG+G+    L    GA+  IA  + ++ +   + +  +         C
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVF 132
           DV   + V + V   ++  G  +I++NNA  +  +P   +       ++ + DI + G  
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNA---WKTITDIVLNGTA 140

Query: 133 HGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
                  + +I  Q     +SI ++    G         +K  V  ++K++AAE GKYG+
Sbjct: 141 FVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGM 200

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           R N + P  + T  A + L      E  M+G R    R   ++       ++AN   FL 
Sbjct: 201 RFNVIQPGPIKTKGAFSRLDPTGTFEKEMIG-RIPCGRLGTVE-------ELANLAAFLC 252

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD A +I+G  +  DGG  
Sbjct: 253 SDYASWINGAVIKFDGGEE 271

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  216 bits (552), Expect = 4e-70
 Identities = 78/268 (29%), Positives = 114/268 (42%), Gaps = 24/268 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGE--PDTFFCH 72
           L G+VA++TG  +GIG          GA + +    D    ++V   L  +      +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGV 131
            D++K E V   VD  V + G +DI+VNNAGI   A   D        ++ +  +N+  V
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEK---WDAILALNLSAV 118

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           FHG   A   M  Q  G II+I S  G +      AY  +KH V+G  K  A E    GI
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178

Query: 192 RVNCVSPYAVATGL---------ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
             N + P  V T L             + +E    + +        +        +T   
Sbjct: 179 TANAICPGWVRTPLVEKQISALAEKNGVDQETAARELL------SEKQP--SLQFVTPEQ 230

Query: 243 VANAVLFLASDEARYISGTNLMVDGGFT 270
           +    +FLASD A  I+GT + VDGG+T
Sbjct: 231 LGGTAVFLASDAAAQITGTTVSVDGGWT 258

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  216 bits (552), Expect = 6e-70
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 14/256 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCHC 73
           L  +VA ITGG +GIG     +F +HG    IA           + L G           
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVF 132
           DV     V +AVD  +++FG +DI++N A  +   P   +       F+ V DI+  G F
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNA---FKTVMDIDTSGTF 141

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +  +           G I++I +  G  G         +K AV  + +++A E G   IR
Sbjct: 142 NVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIR 201

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN ++P  ++    L  L   + +    V   + + R  N         ++A++VL+LAS
Sbjct: 202 VNSLAPGPISGTEGLRRLGGPQASLSTKVT-ASPLQRLGNKT-------EIAHSVLYLAS 253

Query: 253 DEARYISGTNLMVDGG 268
             A Y++G  L+ DGG
Sbjct: 254 PLASYVTGAVLVADGG 269

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  215 bits (551), Expect = 7e-70
 Identities = 72/269 (26%), Positives = 112/269 (41%), Gaps = 29/269 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV----CQSLGGEPDTFF 70
             V +  ++TGG  GIG +  R     GA V +         +V     +  G +  T  
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK--TKA 68

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
             CDV+  + V   +       G +  ++ NAG+S   P  ++   D   F  V+D+NV 
Sbjct: 69  YQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHED---FAFVYDVNVF 125

Query: 130 GVFHGMKHAARIMIP-QTKGTIISICSVAGAI-------GGLGPHAYTGSKHAVLGLNKN 181
           GVF+  +  A++ +  Q KG+I+   S++  I       G L    Y  SK A   L K 
Sbjct: 126 GVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKG 185

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           +AAE    GIRVN +SP  V T    AH+ ++ R              +           
Sbjct: 186 LAAEWASAGIRVNALSPGYVNTDQT-AHMDKKIRDH----------QASNIPLNRFAQPE 234

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFT 270
           ++    + L SD A Y++G    +DGG  
Sbjct: 235 EMTGQAILLLSDHATYMTGGEYFIDGGQL 263

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  214 bits (548), Expect = 1e-69
 Identities = 44/258 (17%), Positives = 85/258 (32%), Gaps = 21/258 (8%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
             A++T      G  +     + G  V   D       ++ ++        +       E
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-EAFAET----YPQLKPMSE 56

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           ++    ++     +G +D++V+N   +    P  + A   ++    +      F  +   
Sbjct: 57  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAV-EDYRGAVEALQIRPFALVNAV 115

Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSP 198
           A  M  +  G II I S            YT ++     L   ++ ELG+Y I V  + P
Sbjct: 116 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 175

Query: 199 YAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLAS 252
             + +            +   +               + T L    T  ++   V FLAS
Sbjct: 176 NYLHSEDSPYFYPTEPWKTNPE---------HVAHVKKVTALQRLGTQKELGELVAFLAS 226

Query: 253 DEARYISGTNLMVDGGFT 270
               Y++G    + GGF 
Sbjct: 227 GSCDYLTGQVFWLAGGFP 244

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  214 bits (548), Expect = 1e-69
 Identities = 83/272 (30%), Positives = 120/272 (44%), Gaps = 37/272 (13%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG----QQVCQSLGGEPDTF 69
             L G+  LITG + GIG +T RLF + GAKV +   +            ++ GG+    
Sbjct: 3   PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGD--AA 60

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG--APCPDIREADLSEFEKVFDIN 127
           F   D+   E     VD  V KFG +D+++NNAG      P P+I +     ++ V D N
Sbjct: 61  FFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTF---YDAVMDAN 117

Query: 128 VKGVFHGMKHAARIMIPQTK-----GTIISICSVAGAIGG-LGPHAYTGSKHAVLGLNKN 181
           ++ V    K A   +    K       +IS  S+AG  GG  G   Y  +K  +  ++KN
Sbjct: 118 IRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKN 177

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL--- 238
                 K G+R N VSP  V T    A   ++ R  D +              G  +   
Sbjct: 178 WVDFHTKDGVRFNIVSPGTVDTAF-HADKTQDVR--DRI------------SNGIPMGRF 222

Query: 239 -TANDVANAVLFLASDEA-RYISGTNLMVDGG 268
            TA ++A A LF AS  A  YI+G  L ++GG
Sbjct: 223 GTAEEMAPAFLFFASHLASGYITGQVLDINGG 254

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  214 bits (547), Expect = 2e-69
 Identities = 48/260 (18%), Positives = 84/260 (32%), Gaps = 28/260 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVC-QSLGGEPDTFFCH 72
            L  +  +      GIG  T R   K   K   I D  +N       +++  + +  F  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 73  CDVT-KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            DVT    +    +    ++  T+DI++N AGI       + +      E+   IN  G+
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGI-------LDDHQ---IERTIAINFTGL 111

Query: 132 FHGMKHAARIMIPQTKG---TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            +           +  G    I +ICSV G         Y+ SK AV+    ++A     
Sbjct: 112 VNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPI 171

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            G+    ++P    T L +         E  +            +     T+       +
Sbjct: 172 TGVTAYSINPGITRTPL-VHTFNSWLDVEPRV--------AELLLSHPTQTSEQCGQNFV 222

Query: 249 FLASDEARYISGTNLMVDGG 268
                     +G    +D G
Sbjct: 223 KAIEANK---NGAIWKLDLG 239

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  213 bits (545), Expect = 4e-69
 Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 15/261 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
            L G+ AL+TG A G+G +        GA+V + D++  L  +   +L  +  D      
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVF 132
           DVT E  + +A      +   +DI++NNAGI    P  ++   +   ++KV D N+   F
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELEN---WQKVIDTNLTSAF 122

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              + AA+ MI + + G II+I S+           YT +K  +  L  ++AAE  ++ I
Sbjct: 123 LVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNI 182

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           + N + P  + T +  A + +++              R    +       ++    +FL+
Sbjct: 183 QTNAIGPGYILTDMNTALIEDKQFDSWVKS--STPSQRWGRPE-------ELIGTAIFLS 233

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           S  + YI+G  + VDGG+ +V
Sbjct: 234 SKASDYINGQIIYVDGGWLAV 254

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  214 bits (548), Expect = 6e-69
 Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 24/274 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD--------VQDNLGQQVCQSLGGEP 66
            L G+VA++TGGATGIG++ V+   + G+ V IA           D L   +  +     
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQAR- 73

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFD 125
                 C++  EE+V + V  T++ FG ++ +VNN G    +P   I       +  V +
Sbjct: 74  -VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKG---WHAVLE 129

Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
            N+ G F+  K      + +  G+I++I  V    G         ++  V  L K++A E
Sbjct: 130 TNLTGTFYMCKAVYSSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALE 188

Query: 186 LGKYGIRVNCVSPYAVATGLALAHL-PEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
               GIR+NCV+P  + +  A+ +     +   +     +    R    +       +V+
Sbjct: 189 WACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQ-KIPAKRIGVPE-------EVS 240

Query: 245 NAVLFLASDEARYISGTNLMVDGGFTSVNHSLRV 278
           + V FL S  A +I+G ++ VDGG +   HS  V
Sbjct: 241 SVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEV 274

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  212 bits (543), Expect = 8e-69
 Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 30/259 (11%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           R   +V +ITG + GIG   VR +     +V               S   +        D
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK------PSADPD--IHTVAGD 76

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           ++K E     V   +E+FG +D +VNNAG+    P  ++ + D   ++    +NV G FH
Sbjct: 77  ISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQED---YDHNLGVNVAGFFH 133

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIG--GLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
             + AA  M+ Q  G I+SI +        G+     + +K  +  + +++A E  + G+
Sbjct: 134 ITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGV 193

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN VSP  + T +     P E      + G  + V R            DV +AVL+L 
Sbjct: 194 RVNAVSPGVIKTPM----HPAETH--STLAG-LHPVGRMG-------EIRDVVDAVLYL- 238

Query: 252 SDEARYISGTNLMVDGGFT 270
            + A +I+G  L VDGG  
Sbjct: 239 -EHAGFITGEILHVDGGQN 256

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  212 bits (542), Expect = 1e-68
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 11/262 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCH 72
            + G+VA+ITG ++GIG +    F K GA + +   Q +   +  +SL  +         
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV   E V + V+     FG  DI+VNNAG        I EA   +++  +++ V    
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNE--TIMEAADEKWQFYWELLVMAAV 121

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +     M  +  G II   S+           Y  +K A++  +K +A E+ K  IR
Sbjct: 122 RLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIR 181

Query: 193 VNCVSPYAVATGLALAHLPE--EERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVL 248
           VNC++P  + T   +    E  ++   D     ++    +A ++      +  ++AN  +
Sbjct: 182 VNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFA---SPEELANFFV 238

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           FL S+ A Y  G+   VDGG  
Sbjct: 239 FLCSERATYSVGSAYFVDGGML 260

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  211 bits (540), Expect = 2e-68
 Identities = 74/259 (28%), Positives = 111/259 (42%), Gaps = 17/259 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +RL G+ AL+TG A GIG++        GA V ++D+     +    S+G +        
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKK--ARAIAA 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           D++    V +         G +DI+VNNA I       D+       + K+ D+N+ G F
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDH---WRKIIDVNLTGTF 116

Query: 133 HGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              +     M    K G +ISI S     G     AY  +K  V+G  + +A ELGKY I
Sbjct: 117 IVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNI 176

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
             N V+P  + +   +   P  E      V     +               +A+ V FLA
Sbjct: 177 TANAVTPGLIESDG-VKASPHNEA--FGFVEMLQAMKGKG-------QPEHIADVVSFLA 226

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD+AR+I+G  L VD G  
Sbjct: 227 SDDARWITGQTLNVDAGMV 245

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  211 bits (540), Expect = 3e-68
 Identities = 79/261 (30%), Positives = 128/261 (49%), Gaps = 16/261 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCH 72
            L GRVAL+TGG+ G+G    +   + G  V +A        +  Q L  +   +T    
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 77

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGV 131
           CDV+  E+V   ++   EKFG LD +VN AGI+   P  +    +   F +V ++N+ G 
Sbjct: 78  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDE---FRQVIEVNLFGT 134

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYG 190
           ++  + A  ++      +II+I S+      +    AY  SK  V  L K +A E G+YG
Sbjct: 135 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 194

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVN ++P    T +    +  +    D M+  R  + R    +       D+    +FL
Sbjct: 195 IRVNVIAPGWYRTKMT-EAVFSDPEKLDYMLK-RIPLGRTGVPE-------DLKGVAVFL 245

Query: 251 ASDEARYISGTNLMVDGGFTS 271
           AS+EA+Y++G  + VDGG+T+
Sbjct: 246 ASEEAKYVTGQIIFVDGGWTA 266

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  207 bits (529), Expect = 8e-67
 Identities = 55/266 (20%), Positives = 97/266 (36%), Gaps = 27/266 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTF 69
                 +A+ITG + GIG          G +V +        + +  ++ +S     +  
Sbjct: 3   LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPI 62

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               D+T      + +    +K+G +DI+VN A +            +  F K+ +INV 
Sbjct: 63  VLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDG---SLSEPVDNFRKIMEINVI 119

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             +  +K    IM  Q  G I ++ S A   G      Y  +K A+LGL +++  EL   
Sbjct: 120 AQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPL 179

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRV  + P  V T +A        + E+                   +  +D+ N +  
Sbjct: 180 GIRVTTLCPGWVNTDMA-KKAGTPFKDEEM------------------IQPDDLLNTIRC 220

Query: 250 LASDEAR-YISGTNLMVDGGFTSVNH 274
           L +      I      +       +H
Sbjct: 221 LLNLSENVCIKDIVFEMKKSIIEGHH 246

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  207 bits (529), Expect = 2e-66
 Identities = 73/259 (28%), Positives = 114/259 (44%), Gaps = 18/259 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ--QVCQSLGGEPDTFFCH 72
            L GR A++TG  +GIG +    + + GA V      D + +        GG        
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGS--AEAVV 85

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGV 131
            D+   E   +  +  +     +D++VNNAGI   AP  ++       + +V  +N+   
Sbjct: 86  ADLADLEGAANVAE-ELAATRRVDVLVNNAGIIARAPAEEVSLGR---WREVLTVNLDAA 141

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           +   +     M+    G I++I S+    GG    AY  SKHAV+GL + +A+E    G+
Sbjct: 142 WVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGV 201

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            VN ++P  V T    A   ++ER  +     R    R A       T  D+    +FLA
Sbjct: 202 GVNALAPGYVVTANTAALRADDERAAEITA--RIPAGRWA-------TPEDMVGPAVFLA 252

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD A Y+ G  L VDGG+ 
Sbjct: 253 SDAASYVHGQVLAVDGGWL 271

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  205 bits (525), Expect = 3e-66
 Identities = 40/262 (15%), Positives = 88/262 (33%), Gaps = 38/262 (14%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
             + +  L+ GG+  +G   V+ F          D ++N                     
Sbjct: 19  SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-----------HSFTIK 67

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
            + EE++ S ++    K   +D  V  AG   +      +  L   + + D+N+   F  
Sbjct: 68  DSGEEEIKSVIEKINSKSIKVDTFVCAAGG-WSGGNASSDEFLKSVKGMIDMNLYSAFAS 126

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG--KYGIR 192
               A+++     G  +   + A      G  AY  +K A   + K++A+E G    G  
Sbjct: 127 AHIGAKLL--NQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGST 184

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL-FLA 251
              + P  + T     ++ +    +                       ++VA  +  +  
Sbjct: 185 SLGILPVTLDTPTNRKYMSDANFDDWT-------------------PLSEVAEKLFEWST 225

Query: 252 SDEARYISGTNLMVD--GGFTS 271
           + ++R  +G+ +  +     T+
Sbjct: 226 NSDSRPTNGSLVKFETKSKVTT 247

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  207 bits (528), Expect = 3e-66
 Identities = 66/296 (22%), Positives = 116/296 (39%), Gaps = 47/296 (15%)

Query: 3   NSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQ 57
           + +S+   P    +    A++TG A  IG +     H+ G +V I     A+   +L  +
Sbjct: 8   HHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADE 67

Query: 58  VCQSLGGEPDTFFCHCDVTKEEDVCSAV----DLTVEKFGTLDIMVNNAGIS-GAPCPDI 112
           + +          C  D+T    + ++     +     FG  D++VNNA      P    
Sbjct: 68  LNKERSNT--AVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQG 125

Query: 113 READL-------SEFEKVFDINVKGVFHGMKHAARIM------IPQTKGTIISICSVAGA 159
              D        ++  ++   N    F      A+           +  +I+++C     
Sbjct: 126 DHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVD 185

Query: 160 IGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA 219
              +    Y   KHA++GL ++ A EL  YGIRVN V+P           + EE      
Sbjct: 186 QPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLL---PVAMGEE------ 236

Query: 220 MVGFRNFVARNANMQGTEL-----TANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                    ++   +   L     +A  +A+AV+FL S  A+YI+G+ + VDGG +
Sbjct: 237 --------EKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  206 bits (527), Expect = 3e-66
 Identities = 66/285 (23%), Positives = 110/285 (38%), Gaps = 37/285 (12%)

Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLG 63
           +  + +      A+ITGGA  IG S     H+ G +V +           L  ++  +  
Sbjct: 2   NETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA 61

Query: 64  GEPDTFFCHCDVTKEEDVCSA----VDLTVEKFGTLDIMVNNAGI---------SGAPCP 110
           G      C  D++    +       +D +   FG  D++VNNA                 
Sbjct: 62  GS--AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGA 119

Query: 111 DIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-----QTKGTIISICSVAGAIGGLGP 165
              +   ++  ++F  N       ++  AR             +++++C     +   G 
Sbjct: 120 ADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGF 179

Query: 166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRN 225
             YT +KHA+ GL +  A EL    IRVN V+P       A+    +EE      +G   
Sbjct: 180 CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLG--- 236

Query: 226 FVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                   +    +A  +A+A+ FL S +A YI+GT L VDGG  
Sbjct: 237 ------QSEA---SAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  206 bits (527), Expect = 3e-66
 Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 27/267 (10%)

Query: 15  RLVGRVALITG--GATGIGESTVRLFHKHGAKVCIADVQ-----DNLGQQVCQSLGGEPD 67
            L G+V ++TG  G  G+G    R   + GA V I         +   +++ ++ G +  
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIK-- 74

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDI 126
                C V   E     V   V  FG +D  + NAG +  +   D        +  V  +
Sbjct: 75  AKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEA---WNHVVQV 131

Query: 127 NVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAA 184
           ++ G FH  K        +  G+++   S++G I        +Y  +K   + + +++A 
Sbjct: 132 DLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLAN 191

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E   +  RVN +SP  + TGL+   +P+E +       + + +       G +  A ++ 
Sbjct: 192 EWRDF-ARVNSISPGYIDTGLS-DFVPKETQQL-----WHSMIP-----MGRDGLAKELK 239

Query: 245 NAVLFLASDEARYISGTNLMVDGGFTS 271
            A ++ ASD + Y +G +L++DGG+T+
Sbjct: 240 GAYVYFASDASTYTTGADLLIDGGYTT 266

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  205 bits (524), Expect = 6e-66
 Identities = 76/266 (28%), Positives = 112/266 (42%), Gaps = 29/266 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQV---CQSLGGEPDTF 69
           QR   R  ++ G    IG +    F + GA V +       G        + LG      
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS--AL 61

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               D+T   +V +A+    +KFG +  +V+ AG   A    I E D + + +V D+N+ 
Sbjct: 62  AIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKT-IAEMDEAFWHQVLDVNLT 120

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGK 188
            +F   K A   M     G I++  S AG  GG  G  AY  SK AV+   + +A E+G 
Sbjct: 121 SLFLTAKTALPKMAKG--GAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP 178

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVA 244
             IRVN V P  ++T        + E  E                  T L    ++ DVA
Sbjct: 179 -KIRVNAVCPGMISTTF-HDTFTKPEVRERVA-------------GATSLKREGSSEDVA 223

Query: 245 NAVLFLASDEARYISGTNLMVDGGFT 270
             V FLASD+A Y++G    ++GG  
Sbjct: 224 GLVAFLASDDAAYVTGACYDINGGVL 249

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  205 bits (524), Expect = 1e-65
 Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 19/263 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQV---CQSLGGEPDTFF 70
           +    VA++TGG  GIG    R     G  + I  + D  G   V      LG      F
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR--VIF 83

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D+       + VD  V +FG +D +VNNAGI+     D  +     F+ +  +N++G
Sbjct: 84  LRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRG 143

Query: 131 VFHGMKHAARIMI---PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
                +   + M+    +   +II+I SV+  +       Y  SK  +   ++ +A  L 
Sbjct: 144 TVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLA 203

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           + GI V  V P  + + +  A +  +      +      + R            D+ N V
Sbjct: 204 ETGIAVFEVRPGIIRSDM-TAAVSGKYD--GLIESGLVPMRRWG-------EPEDIGNIV 253

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
             LA  +  + +G+ +  DGG +
Sbjct: 254 AGLAGGQFGFATGSVIQADGGLS 276

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  202 bits (517), Expect = 8e-65
 Identities = 71/263 (26%), Positives = 106/263 (40%), Gaps = 28/263 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCH 72
            L GR  ++TGG  GIG     +F + GA V +A             L   G        
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKG 130
            DV+      +     VE+FG +D++  NAG+     PD   A ++      +F +NV G
Sbjct: 67  TDVSDRAQCDALAGRAVEEFGGIDVVCANAGVF----PDAPLATMTPEQLNGIFAVNVNG 122

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGG-LGPHAYTGSKHAVLGLNKNVAAELGKY 189
            F+ ++     +I    G ++   S+ G I G  G   Y  +K A LG  +  A EL  +
Sbjct: 123 TFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPH 182

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVAN 245
            I VN + P  + T   L    EE                 +  +        T  D+ +
Sbjct: 183 KITVNAIMPGNIMTEG-LLENGEE--------------YIASMARSIPAGALGTPEDIGH 227

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
              FLA+ EA YI+G  + VDGG
Sbjct: 228 LAAFLATKEAGYITGQAIAVDGG 250

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  201 bits (513), Expect = 2e-64
 Identities = 55/252 (21%), Positives = 91/252 (36%), Gaps = 34/252 (13%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADV--------QDNLGQQV--CQSLGGEPDT 68
            + LITG   GIG +    F +        +           +L +    C++ G   DT
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                D++   DV       VE++G +D +VNNAG+       + +    +F+   + N+
Sbjct: 63  I--TADISDMADVRRLTTHIVERYGHIDCLVNNAGV--GRFGALSDLTEEDFDYTMNTNL 118

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           KG F   +    +M  Q  G I  I SVA          Y  SK    GL + +     K
Sbjct: 119 KGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARK 178

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
             +R+  V P AV T +    + +E +                      +   D+A  V+
Sbjct: 179 CNVRITDVQPGAVYTPMW-GKVDDEMQ-------------------ALMMMPEDIAAPVV 218

Query: 249 FLASDEARYISG 260
                 +R +  
Sbjct: 219 QAYLQPSRTVVE 230

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  203 bits (518), Expect = 2e-64
 Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 5/247 (2%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCH 72
               GR A++TGGA+GIG +T   F + GA++ ++DV     +Q    L G+  D     
Sbjct: 27  SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV 86

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDV   +++    D      G +D++ +NAGI  A    + + +  ++  V DI++ G  
Sbjct: 87  CDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAG--PLAQMNHDDWRWVIDIDLWGSI 144

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           H ++     ++ Q T G I    S AG +   G   Y  +K+ V+GL + +A E+   GI
Sbjct: 145 HAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGI 204

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            V+ + P  V T L +++       +  M             Q   ++A+DVA       
Sbjct: 205 GVSVLCPMVVETKL-VSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAI 263

Query: 252 SDEARYI 258
                YI
Sbjct: 264 LANRLYI 270

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  202 bits (516), Expect = 2e-64
 Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 18/262 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L GR+AL+TGG+ GIG+   +   + GA+V I              L    D      D
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPAD 85

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFH 133
           ++ E           E    LDI+VNNAG S GA       +    +EKV  +NV  VF 
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSG---WEKVMQLNVTSVFS 142

Query: 134 GMKHAARIM----IPQTKGTIISICSVAGAIG-GLGPHAYTGSKHAVLGLNKNVAAELGK 188
            ++    ++      +    +I+I SVAG    G   +AY  SK A+  L++ +A EL  
Sbjct: 143 CIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVG 202

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
             I VN ++P    + +   H+  + +  +A       + R            ++A   +
Sbjct: 203 EHINVNVIAPGRFPSRMT-RHIANDPQALEADSA-SIPMGRWG-------RPEEMAALAI 253

Query: 249 FLASDEARYISGTNLMVDGGFT 270
            LA     Y++G  + +DGGF 
Sbjct: 254 SLAGTAGAYMTGNVIPIDGGFH 275

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  202 bits (515), Expect = 2e-64
 Identities = 76/263 (28%), Positives = 113/263 (42%), Gaps = 25/263 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQV---CQSLGGEPDTFFC 71
               V L+TGG+ GIG +  RL  + G +V +    +      V       GGE      
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGE--AVAI 81

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV    D+ +       +FG LD +VNNAGI   P   + E  +   E++  +NV G 
Sbjct: 82  PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQR-VDEMSVERIERMLRVNVTGS 140

Query: 132 FHGMKHAARIMIPQTK---GTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELG 187
                 A R M        G I+++ S+A  +G    +  Y  SK A+      +A E+ 
Sbjct: 141 ILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVA 200

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVAN 245
             GIRVN V P  + T L  +    +   E         +A +  MQ  G      +VA+
Sbjct: 201 AEGIRVNAVRPGIIETDLHASGGLPDRARE---------MAPSVPMQRAGM---PEEVAD 248

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
           A+L+L S  A Y++G+ L V GG
Sbjct: 249 AILYLLSPSASYVTGSILNVSGG 271

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  200 bits (512), Expect = 3e-64
 Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 23/256 (8%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R AL+TGG+ GIG +        G +V IA       ++  QSLG          D+ K+
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNP---EEAAQSLGAV----PLPTDLEKD 55

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            D    V   +E  G L ++V+ A ++   P  ++   +   + +V  +++   F   + 
Sbjct: 56  -DPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEE---WRRVLYLHLDVAFLLAQA 111

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           AA  M     G ++ I SV     G      AYT +K A+LGL + +A E  + GIRVN 
Sbjct: 112 AAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNL 171

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           + P  V T      L +     + +   R  + R A          ++A     L  DEA
Sbjct: 172 LCPGYVETEFT-LPLRQNPELYEPITA-RIPMGRWA-------RPEEIARVAAVLCGDEA 222

Query: 256 RYISGTNLMVDGGFTS 271
            Y++G  + VDGGF +
Sbjct: 223 EYLTGQAVAVDGGFLA 238

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  201 bits (513), Expect = 3e-64
 Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 24/268 (8%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF 70
            A + + G VA+ITGGA+G+G +T       GA   + D+ ++ G+   + LG      F
Sbjct: 5   AACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN--CVF 62

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA----PCPDIREADLSEFEKVFDI 126
              DVT E+DV +A+ L   KFG +D+ VN AGI+ A         +   L +F++V D+
Sbjct: 63  APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122

Query: 127 NVKGVFHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           N+ G F+ ++  A  M          +G II+  SVA   G +G  AY+ SK  ++G+  
Sbjct: 123 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 182

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
            +A +L   GIRV  ++P    T L L  LPE+    + +     F +R           
Sbjct: 183 PIARDLAPIGIRVMTIAPGLFGTPL-LTSLPEKVC--NFLASQVPFPSRLG-------DP 232

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
            + A+ V  +   E  +++G  + +DG 
Sbjct: 233 AEYAHLVQAII--ENPFLNGEVIRLDGA 258

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  202 bits (515), Expect = 4e-64
 Identities = 76/274 (27%), Positives = 114/274 (41%), Gaps = 28/274 (10%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG 63
           S        +  L  R  L+TGG  GIG     +F + GA V +A         V   LG
Sbjct: 27  SAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELG 86

Query: 64  --GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE-- 119
             G  +      DV+       A    V+ FG LD++  NAGI     P+ R   ++   
Sbjct: 87  ELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIF----PEARLDTMTPEQ 142

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-LGPHAYTGSKHAVLGL 178
             +V D+NVKG  + ++     +    +G +I   S+ G + G  G   Y  SK A LG 
Sbjct: 143 LSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGF 202

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            +  A EL   G+ VN + P  + T   L  + EE                +   +   +
Sbjct: 203 MRTAAIELAPRGVTVNAILPGNILTEG-LVDMGEE--------------YISGMARSIPM 247

Query: 239 ----TANDVANAVLFLASDEARYISGTNLMVDGG 268
               +  D+ +   FLA+DEA YI+G  ++VDGG
Sbjct: 248 GMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG 281

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  200 bits (510), Expect = 6e-64
 Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 24/263 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +L  RV ++TG ++G+G +  R+  + GA V   D++   G++    LG      F + D
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAA--VRFRNAD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR---EADLSEFEKVFDINVKGV 131
           VT E D  +A+    ++FG +  +VN AG        +       L  F +   +N+ G 
Sbjct: 62  VTNEADATAALAFAKQEFGHVHGLVNCAGT-APGEKILGRSGPHALDSFARTVAVNLIGT 120

Query: 132 FHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           F+ ++ AA +M          +G I++  S+A   G +G  AY  SK  V  L    A E
Sbjct: 121 FNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARE 180

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
           L ++GIRV  ++P    T + +A +P++ +  DA+     F  R          A + A 
Sbjct: 181 LARFGIRVVTIAPGIFDTPM-MAGMPQDVQ--DALAASVPFPPRLG-------RAEEYAA 230

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
            V  +   E   ++G  + +DG 
Sbjct: 231 LVKHIC--ENTMLNGEVIRLDGA 251

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  199 bits (508), Expect = 1e-63
 Identities = 60/256 (23%), Positives = 91/256 (35%), Gaps = 12/256 (4%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC---HCDVT 76
           V  ITG A+GIG +   L  + G  V   D      +    + GG           C   
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGV 62

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            +  VC A          L + VN  G+S             +      +          
Sbjct: 63  LDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGA 122

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
               ++     G       +A    G    AY GSK+AV  L +    +    G+R+N V
Sbjct: 123 AELPMVEAMLAGDEARAIELAE-QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVV 181

Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
           +P AV T L L     + R  ++   F   + R +          +VA A+ FL   +A 
Sbjct: 182 APGAVETPL-LQASKADPRYGESTRRFVAPLGRGS-------EPREVAEAIAFLLGPQAS 233

Query: 257 YISGTNLMVDGGFTSV 272
           +I G+ L VDGG  ++
Sbjct: 234 FIHGSVLFVDGGMDAL 249

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  198 bits (505), Expect = 3e-63
 Identities = 82/263 (31%), Positives = 124/263 (47%), Gaps = 36/263 (13%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL  +  LITG A GIG +T+ LF K GA++   D+++   ++  +++G  P       D
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP----VVMD 57

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDINVK 129
           V     V       +   G LD +V+ AGI        R+         ++E V  +N+ 
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGI-------TRDNFHWKMPLEDWELVLRVNLT 110

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           G F   K A+  M  +  G+I+   S    +G LG   Y  S   V+GL + +A ELG++
Sbjct: 111 GSFLVAKAASEAMREKNPGSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGRW 169

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVAN 245
           GIRVN ++P  + T +  A +PE+               R   +  T L       +VA 
Sbjct: 170 GIRVNTLAPGFIETRM-TAKVPEK--------------VREKAIAATPLGRAGKPLEVAY 214

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
           A LFL SDE+ +I+G  L VDGG
Sbjct: 215 AALFLLSDESSFITGQVLFVDGG 237

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  199 bits (508), Expect = 3e-63
 Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 19/271 (7%)

Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGG 64
            P    L G+VAL+TG   GIG        + G KV +      +  + +   + +  G 
Sbjct: 21  GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAI-KKNGS 79

Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF 124
           +        +V   ED+    +  V+ FG LDI+ +N+G+       +++    EF++VF
Sbjct: 80  D--AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV--VSFGHVKDVTPEEFDRVF 135

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVA 183
            IN +G F   + A + +  +  G +I + S+ G    +  HA Y+GSK A+    + +A
Sbjct: 136 TINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMA 193

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----T 239
            ++    I VN V+P  + T +  A   E     + +      V   A +Q + L     
Sbjct: 194 IDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSN--EEVDEYAAVQWSPLRRVGL 251

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFT 270
             D+A  V FLAS++  +++G  + +DGG  
Sbjct: 252 PIDIARVVCFLASNDGGWVTGKVIGIDGGAC 282

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  197 bits (504), Expect = 9e-63
 Identities = 61/271 (22%), Positives = 100/271 (36%), Gaps = 37/271 (13%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV----------CQSLGG 64
            L G+   ITG + GIG +      + GA V IA        ++            + GG
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKV 123
           +       CD+ +E+ V +AV  TV+ FG +DI+VNNA         D        F+ +
Sbjct: 63  Q--GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKR---FDLM 117

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-GLGPH-AYTGSKHAVLGLNKN 181
             +N +G F   +     ++      I+++           G H  YT +K  +  +   
Sbjct: 118 QQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLG 177

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           +AAE G  G+ +N + P  V    A+  LP  +    A                      
Sbjct: 178 LAAEFGPQGVAINALWPRTVIATDAINMLPGVDA---AACR----------------RPE 218

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFTSV 272
            +A+A   + + EA    G  L+ D      
Sbjct: 219 IMADAAHAVLTREAAGFHGQFLIDDEVLAQA 249

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  197 bits (504), Expect = 1e-62
 Identities = 72/281 (25%), Positives = 116/281 (41%), Gaps = 27/281 (9%)

Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS 61
            +S        +      VAL+TG  +GIG    R   K G +V +    +   +   + 
Sbjct: 6   HSSGLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE 65

Query: 62  L---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADL 117
           L   G E D     CDV    ++ + V   VE++G +D++VNNAG  G     ++ +   
Sbjct: 66  LREAGVEADGR--TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL- 122

Query: 118 SEFEKVFDINVKGVFHGMKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
             +  V + N+ GVF   K   +   M+ +  G I++I S  G  G +    Y+ SKH V
Sbjct: 123 --WLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 180

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVAT----GLALAHLPEEERTEDAMVGFRNFVARNA 231
           +G  K +  EL + GI VN V P  V T     +   +    E + +         A + 
Sbjct: 181 VGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEE--------AFDR 232

Query: 232 NMQGTEL----TANDVANAVLFLASDEARYISGTNLMVDGG 268
                 +      ++VA  V +L    A  ++   L V GG
Sbjct: 233 ITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 273

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  197 bits (503), Expect = 1e-62
 Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 30/277 (10%)

Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQ 56
            +  + +          +VA++TG + GIG +        G  V I     A   + +  
Sbjct: 11  VDLGTENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAG 70

Query: 57  QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD 116
           ++ ++ GG+        DV+    V        E FG +D++VNNAGI   P   I E  
Sbjct: 71  KI-EAAGGK--ALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGI--MPLTTIAETG 125

Query: 117 LSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL 176
            + F++V  +N+KG F+ ++ AA+ +  +  G II++ +    +       Y  +K  V 
Sbjct: 126 DAVFDRVIAVNLKGTFNTLREAAQRL--RVGGRIINMSTSQVGLLHPSYGIYAAAKAGVE 183

Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT 236
            +   ++ EL    I VN V+P   AT L L    +E               R+   +  
Sbjct: 184 AMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDE--------------VRDRFAKLA 229

Query: 237 EL----TANDVANAVLFLASDEARYISGTNLMVDGGF 269
            L    T  D+A AV FLA  +  +++G  L  +GG 
Sbjct: 230 PLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI 266

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  195 bits (499), Expect = 2e-62
 Identities = 43/260 (16%), Positives = 93/260 (35%), Gaps = 26/260 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           +     ++TG  +G+G +      + G +V +   +    QQ    LG          D+
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNA--VIGIVADL 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              EDV  A    VE  G  +++++ AG        +      +  +V + N+       
Sbjct: 59  AHHEDVDVAFAAAVEWGGLPELVLHCAGT--GEFGPVGVYTAEQIRRVMESNLVSTILVA 116

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +   R++  +  G + ++ S A  +G      Y  SK  + G  +++ AEL    +R+  
Sbjct: 117 QQTVRLIG-ERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVN 175

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF-LASDE 254
           + P  + +                      +   +       +T  D A  +L  L +  
Sbjct: 176 LYPSGIRSEF--------------------WDNTDHVDPSGFMTPEDAAAYMLDALEARS 215

Query: 255 ARYISGTNLMVDGGFTSVNH 274
           + +++   +  + G    +H
Sbjct: 216 SCHVTDLFIGRNEGHHHHHH 235

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  196 bits (501), Expect = 2e-62
 Identities = 64/270 (23%), Positives = 109/270 (40%), Gaps = 27/270 (10%)

Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-------ADVQDNLGQQVCQS 61
           S      L  +V +I GG   +G  T + F      + +       +D  + L  ++ + 
Sbjct: 2   SLTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDEL-ED 60

Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEF 120
            G +        D++ EE+V    D   ++FG +DI +N  G     P  +  EA+   F
Sbjct: 61  QGAK--VALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAE---F 115

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           + +  IN K  +  +K AA+ M     G II+I +   A        Y G+K  V    +
Sbjct: 116 DAMDTINNKVAYFFIKQAAKHM--NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTR 173

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
             + EL K  I VN ++P  + T         +E T            ++  M       
Sbjct: 174 AASKELMKQQISVNAIAPGPMDTSFFYG-QETKESTA---------FHKSQAMGNQLTKI 223

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFT 270
            D+A  + FL +D   +I+G  +  +GG+T
Sbjct: 224 EDIAPIIKFLTTD-GWWINGQTIFANGGYT 252

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  196 bits (500), Expect = 3e-62
 Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 20/279 (7%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLG 55
           M +  +   +    RL G+VAL+TG   GIG +      + GAKV +         + + 
Sbjct: 1   MPHVENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVV 60

Query: 56  QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA 115
            ++ ++LG +        D+ +  ++    D  V  FG LDI V+N+G+       +++ 
Sbjct: 61  SEI-KALGSD--AIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV--VSFGHLKDV 115

Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHA 174
              EF++VF +N +G F   + A R +     G I+   S       +  H+ Y+GSK A
Sbjct: 116 TEEEFDRVFSLNTRGQFFVAREAYRHLTEG--GRIVLTSSNTSKDFSVPKHSLYSGSKGA 173

Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           V    +  + + G   I VN V+P    T +             +    +    +     
Sbjct: 174 VDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQ---RQQMAAH 230

Query: 235 GTEL----TANDVANAVLFLASDEARYISGTNLMVDGGF 269
            + L       DVAN V FL S E  +++G  L +DGG 
Sbjct: 231 ASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  195 bits (498), Expect = 8e-62
 Identities = 83/276 (30%), Positives = 117/276 (42%), Gaps = 19/276 (6%)

Query: 3   NSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL 62
           + +S            + A +TG ++GIG +  R     G  V                L
Sbjct: 9   HHSSGLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGL 68

Query: 63  ---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLS 118
              G + D     CDVT  ++V +AV   VE+FG + I+VN+AG +G     D+ +A   
Sbjct: 69  RAAGHDVDGS--SCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDAL-- 124

Query: 119 EFEKVFDINVKGVFHGMKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL 176
            +  V D N+ GVF   +   R   M     G I++I S  G  G +    YT SKH V+
Sbjct: 125 -WADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVV 183

Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVAT----GLALAHLPEEERTEDAMVGFRNFVARNAN 232
           G  K+V  EL K GI VN V P  V T     +   +      TE  +     F A+   
Sbjct: 184 GFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVH--ERFNAKIP- 240

Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
             G   T  +VA  V +L +D A  I+   L V GG
Sbjct: 241 -LGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG 275

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  195 bits (497), Expect = 1e-61
 Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 19/277 (6%)

Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQ 56
           ++  S+  S A + L G+VAL TG   GIG        + GA V +     +   + +  
Sbjct: 5   ADITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVA 64

Query: 57  QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD 116
           ++ + LG +        D++K  +V +  D  V  FG LD +++N+G+      D  E  
Sbjct: 65  EL-KKLGAQ--GVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGM--EVWCDELEVT 119

Query: 117 LSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAV 175
              F+KVF++N +G F   +   +    +  G II   S+A  + G+  HA Y GSK AV
Sbjct: 120 QELFDKVFNLNTRGQFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAV 177

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
            G  +  A + G  G+ VNC++P  V T +   +           +         ANM  
Sbjct: 178 EGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM-- 235

Query: 236 TEL----TANDVANAVLFLASDEARYISGTNLMVDGG 268
             L       D+  AV  L  +E+ +I+G  + + GG
Sbjct: 236 NPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  191 bits (489), Expect = 8e-61
 Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 29/260 (11%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG          +V
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDN--GKGMALNV 64

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKGVF 132
           T  E + + +    ++FG +DI+VNNAGI+     D   +R  +  E+  + + N+  +F
Sbjct: 65  TNPESIEAVLKAITDEFGGVDILVNNAGIT----RDNLLMRMKE-EEWSDIMETNLTSIF 119

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K   R M+ + +G II++ SV G +G  G   Y  +K  V+G  K++A E+   G+ 
Sbjct: 120 RLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVT 179

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           VN V+P  + T +    L +E               R A +            ++A+AV 
Sbjct: 180 VNTVAPGFIETDMT-KALNDE--------------QRTATLAQVPAGRLGDPREIASAVA 224

Query: 249 FLASDEARYISGTNLMVDGG 268
           FLAS EA YI+G  L V+GG
Sbjct: 225 FLASPEAAYITGETLHVNGG 244

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  193 bits (493), Expect = 2e-60
 Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 12/255 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFF 70
           +   GR A +TGGA G+G   VR     G KV IAD++ +   +   +L   G  P+   
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV   E    A D    +FG + I+ NNAG+       I E+   +++ +  +N+ G
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGV--NLFQPIEESSYDDWDWLLGVNLHG 121

Query: 131 VFHGMKHAARIMI------PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           V +G+      M+       Q  G +++  S+A  +    P  Y  +K AV GL++++  
Sbjct: 122 VVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHY 181

Query: 185 ELGKYGIRVNCVSPYAVATGLAL-AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            L KY I V+ + P  V + +     +  +    +     +  V R A +    +  + +
Sbjct: 182 SLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVI 241

Query: 244 ANAVLFLASDEARYI 258
              V+        +I
Sbjct: 242 GARVIEAMKANRLHI 256

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  191 bits (487), Expect = 2e-60
 Identities = 46/245 (18%), Positives = 82/245 (33%), Gaps = 21/245 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFC 71
                   + G    IG    + F   G  V            +   +   GG       
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGR--IVAR 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             D   E++V + ++   +    L++ + N G      P I E     F KV+++     
Sbjct: 62  SLDARNEDEVTAFLN-AADAHAPLEVTIFNVGA-NVNFP-ILETTDRVFRKVWEMACWAG 118

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F   + +AR+M+   +G I    + A   GG G  A+  +K  +  + +++A EL    I
Sbjct: 119 FVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNI 178

Query: 192 RV-NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
            V + +    V T   +    E+   +DA+                 +    VA A   L
Sbjct: 179 HVAHLIIDSGVDTAW-VRERREQMFGKDALANPDLL-----------MPPAAVAGAYWQL 226

Query: 251 ASDEA 255
                
Sbjct: 227 YQQPK 231

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  191 bits (488), Expect = 2e-60
 Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 25/273 (9%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQV 58
           +    S      L G+ A +TGG+ GIG +  +     GA V +     A+    +  ++
Sbjct: 17  NLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEI 76

Query: 59  CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS 118
            +  GG         D    E +  A+  TVE  G LDI+VN+AGI       + E  ++
Sbjct: 77  -EQAGGR--AVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGI--WHSAPLEETTVA 131

Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS-VAGAIGGLGPHAYTGSKHAVLG 177
           +F++V  +N +  F  ++ A+R +     G II+I S +A  +   G   Y+ SK A+ G
Sbjct: 132 DFDEVMAVNFRAPFVAIRSASRHL--GDGGRIITIGSNLAELVPWPGISLYSASKAALAG 189

Query: 178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
           L K +A +LG  GI VN V P +  T +  A   +    +   +   ++        G  
Sbjct: 190 LTKGLARDLGPRGITVNIVHPGSTDTDMNPA-DGDHAEAQRERIATGSY--------GE- 239

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
               D+A  V +LA  + ++++G +L +DGG  
Sbjct: 240 --PQDIAGLVAWLAGPQGKFVTGASLTIDGGAN 270

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  190 bits (484), Expect = 4e-60
 Identities = 75/238 (31%), Positives = 104/238 (43%), Gaps = 27/238 (11%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
             +    LITG + GIGE+T RL H  G +V +    +   Q +   L G         D
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG---ALPLPGD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V +E D   AV    E FG L  +VNNAG+       + E  L E+  V D N+ G F G
Sbjct: 59  VREEGDWARAVAAMEEAFGELSALVNNAGV--GVMKPVHELTLEEWRLVLDTNLTGAFLG 116

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           ++HA   ++ +  GTI+++ S+AG     G  AY  SK  +LGL      +L +  +RV 
Sbjct: 117 IRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVV 176

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            V P +V TG A  + P +                        L   DVA AVLF   
Sbjct: 177 NVLPGSVDTGFA-GNTPGQAWK---------------------LKPEDVAQAVLFALE 212

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  191 bits (488), Expect = 4e-60
 Identities = 62/273 (22%), Positives = 98/273 (35%), Gaps = 35/273 (12%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV----------CQ 60
           P    L G+   I+GG+ GIG +  +     GA V +         ++           +
Sbjct: 2   PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE 61

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
             GG+        D+   + V +AV  TVE+FG +DI VNNA         I E  L  F
Sbjct: 62  EAGGQ--ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASA--INLGSIEEVPLKRF 117

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-LGPHAYTGSKHAVLGLN 179
           + +  I V+G +   +     M  +    I+++          L P  Y  +K+ +    
Sbjct: 118 DLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCA 177

Query: 180 KNVAAELGKYGIRVNCVSP-YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
             +A EL   GI  N + P   VAT      L  +E    AM   R              
Sbjct: 178 LGIAEELRDAGIASNTLWPRTTVATAAVQNLLGGDE----AMARSR-------------- 219

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
                A+A   + +  + Y  G  L+ +     
Sbjct: 220 KPEVYADAAYVVLNKPSSYT-GNTLLCEDVLLE 251

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  190 bits (485), Expect = 4e-60
 Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 19/261 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ---SLGGEPDTFFC 71
            + G+V ++TG + GIG        K GA V I     +  + V Q   SLGG+      
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQ--CVPV 59

Query: 72  HCDVTKEEDVCSAVD-LTVEKFGTLDIMVNNAGISGAPCPDIR-----EADLSEFEKVFD 125
            CD ++E +V S  + +  E+ G LD++VNNA        + R     E   S ++ + +
Sbjct: 60  VCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINN 119

Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           + ++G +    + AR+M+P  +G I+ I S    +  +    Y   K A   L  + A E
Sbjct: 120 VGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS-LQYMFNVPYGVGKAACDKLAADCAHE 178

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
           L ++G+    + P  V T L   H+ +EE  +D ++        +A       T      
Sbjct: 179 LRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAE------TTELSGK 232

Query: 246 AVLFLASDEAR-YISGTNLMV 265
            V+ LA+D     +SG  L  
Sbjct: 233 CVVALATDPNILSLSGKVLPS 253

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  189 bits (483), Expect = 5e-60
 Identities = 42/263 (15%), Positives = 81/263 (30%), Gaps = 33/263 (12%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
                R  L+ GG   +G   V+ F      V   DV +N                    
Sbjct: 3   ASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN-------EEASASVIVKMTD 55

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
             T++ D  +A    +     +D ++  AG   A      ++     + ++  ++     
Sbjct: 56  SFTEQADQVTAEVGKLLGDQKVDAILCVAGG-WAGGNAKSKSLFKNCDLMWKQSIWTSTI 114

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG--KYGI 191
               A + +  +  G +    + A   G  G   Y  +K AV  L +++A +      G 
Sbjct: 115 SSHLATKHL--KEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 172

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
               V P  + T +    +PE +        F ++                +        
Sbjct: 173 AAIAVLPVTLDTPMNRKSMPEAD--------FSSWT-----------PLEFLVETFHDWI 213

Query: 252 SDEARYISGTNLMV--DGGFTSV 272
           +   R  SG+ + V    G T +
Sbjct: 214 TGNKRPNSGSLIQVVTTDGKTEL 236

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  190 bits (485), Expect = 5e-60
 Identities = 69/270 (25%), Positives = 105/270 (38%), Gaps = 39/270 (14%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV----CQSLGGEPDTFF 70
               R ALIT G  G+G+         G  V +    D    +      + +       F
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEER--LQF 61

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL------SEFEKVF 124
              DVTK+ED+   V+  +  FG +D ++NNAG      P + E          E+ ++ 
Sbjct: 62  VQADVTKKEDLHKIVEEAMSHFGKIDFLINNAG------PYVFERKKLVDYEEDEWNEMI 115

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTII--SICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
             N+  VFH +K    +M  Q  G II         A G +   A+  +K  ++ L K V
Sbjct: 116 QGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTV 175

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL---- 238
           A E  +YGI  N V P  +   +      +E              AR      T +    
Sbjct: 176 AYEEAEYGITANMVCPGDIIGEM-KEATIQE--------------ARQLKEHNTPIGRSG 220

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
           T  D+A  + FL  D++  I+GT + V G 
Sbjct: 221 TGEDIARTISFLCEDDSDMITGTIIEVTGA 250

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  190 bits (485), Expect = 6e-60
 Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 41/274 (14%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-------- 65
            RL   +AL+TG  +GIG +        GA V   D+     Q+  + LGG         
Sbjct: 3   NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPR 62

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFG-TLDIMVNNAGISGAPCPDIREADL-----SE 119
            +      DV++       ++     F     ++V+ AGI        ++  L      +
Sbjct: 63  GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI-------TQDEFLLHMSEDD 115

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           ++KV  +N+KG F   + AA+ ++    +G+II+I S+ G +G +G   Y  SK  V+GL
Sbjct: 116 WDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGL 175

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            +  A ELG++GIR N V P  +AT +    +P++                +   +   +
Sbjct: 176 TQTAARELGRHGIRCNSVLPGFIATPM-TQKVPQK--------------VVDKITEMIPM 220

Query: 239 ----TANDVANAVLFLASDEARYISGTNLMVDGG 268
                  DVA+ V FLAS+++ YI+GT++ V GG
Sbjct: 221 GHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG 254

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  190 bits (484), Expect = 8e-60
 Identities = 45/260 (17%), Positives = 93/260 (35%), Gaps = 31/260 (11%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L     LITG +  +G        +HG +V I+   ++      +  G        + D
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVA----LYGD 79

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
            + E  + + +DL   +  +L  +V+NA        +    +   F ++F +++   +  
Sbjct: 80  FSCETGIMAFIDLLKTQTSSLRAVVHNASEWL---AETPGEEADNFTRMFSVHMLAPYLI 136

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
             H   ++       I+ I       G     AY  +K  +  L  + AA      ++VN
Sbjct: 137 NLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVN 195

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFL 250
            ++P  +          + +              R   +  + L     A  +  ++ +L
Sbjct: 196 GIAPALLMF--------QPKDDAA---------YRANALAKSALGIEPGAEVIYQSLRYL 238

Query: 251 ASDEARYISGTNLMVDGGFT 270
               + Y++GT L V+GG  
Sbjct: 239 LD--STYVTGTTLTVNGGRH 256

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  189 bits (483), Expect = 1e-59
 Identities = 71/270 (26%), Positives = 129/270 (47%), Gaps = 29/270 (10%)

Query: 6   STDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE 65
            T    ++ +L GR AL+TG   GIGE+  R FH  GA V +   +++  +++   LG +
Sbjct: 15  QTQGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKD 74

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEK 122
              F    +++  + +    ++   +   +DI+VNNAGI+     D   +R  D  +++ 
Sbjct: 75  VFVF--SANLSDRKSIKQLAEVAEREMEGIDILVNNAGIT----RDGLFVRMQD-QDWDD 127

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           V  +N+       +     M+ +  G II+I S+ G +G  G   Y  +K  ++G +K +
Sbjct: 128 VLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKAL 187

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL---- 238
           A E+    I VNC++P  + + +    L E+               + A M    +    
Sbjct: 188 AQEIASRNITVNCIAPGFIKSAMT-DKLNEK--------------QKEAIMAMIPMKRMG 232

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
              ++A A ++LASDEA Y++G  L ++GG
Sbjct: 233 IGEEIAFATVYLASDEAAYLTGQTLHINGG 262

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  188 bits (479), Expect = 3e-59
 Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 37/267 (13%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQ---SLGGEPDTFF 70
           +L G+ A++TG + G+G++        GA + +             +   + G       
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVA- 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFD 125
              DV   EDV + V   ++ FG +DI+VNNAGI+       R+  +      +++ V +
Sbjct: 61  -KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGIT-------RDTLMLKMSEKDWDDVLN 112

Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
            N+K  +   K  ++IM+ Q  G II+I S+AG IG  G   Y  SK  ++G  K++A E
Sbjct: 113 TNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKE 172

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TAN 241
               GI  N V+P  + T +    LP++               +   +    L    T  
Sbjct: 173 FAAKGIYCNAVAPGIIKTDM-TDVLPDK--------------VKEMYLNNIPLKRFGTPE 217

Query: 242 DVANAVLFLASDEARYISGTNLMVDGG 268
           +VAN V FLASD++ YI+G  + +DGG
Sbjct: 218 EVANVVGFLASDDSNYITGQVINIDGG 244

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  187 bits (478), Expect = 5e-59
 Identities = 81/264 (30%), Positives = 126/264 (47%), Gaps = 28/264 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            +   VA++TGGA+G+G +T +     GA+V + D++   G+ V   LG      F   D
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDR--ARFAAAD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIRE--ADLSEFEKVFDINVKGVF 132
           VT E  V SA+D   E  GTL I+VN AG   A     R+    L+ F K+ DIN+ G F
Sbjct: 61  VTDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSF 119

Query: 133 HGMKHAARIMI--------PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           + ++ AA  +          + +G II+  SVA   G +G  AY+ SK  V+G+   +A 
Sbjct: 120 NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAR 179

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           +L  + IRV  ++P    T L LA LPEE R   ++       +R           ++  
Sbjct: 180 DLASHRIRVMTIAPGLFDTPL-LASLPEEAR--ASLGKQVPHPSRLG-------NPDEYG 229

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
              + +   E   ++G  + +DG 
Sbjct: 230 ALAVHII--ENPMLNGEVIRLDGA 251

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  188 bits (481), Expect = 6e-59
 Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 19/259 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-----QQVCQSLGGEPDTF 69
           RL  R AL+TGG +GIG +    + + GA V I  +          + + +  G +    
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKA--V 103

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               D++ E    S V    E  G LDI+   AG      P+I++    +F++ F +NV 
Sbjct: 104 LLPGDLSDESFARSLVHKAREALGGLDILALVAGK-QTAIPEIKDLTSEQFQQTFAVNVF 162

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            +F   + A  ++      +II+  S+           Y  +K A+L  ++ +A ++ + 
Sbjct: 163 ALFWITQEAIPLLPKG--ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRVN V+P  + T L ++    +++      G +  + R            ++A   ++
Sbjct: 221 GIRVNIVAPGPIWTALQISGGQTQDKIPQ--FGQQTPMKRAG-------QPAELAPVYVY 271

Query: 250 LASDEARYISGTNLMVDGG 268
           LAS E+ Y++     V GG
Sbjct: 272 LASQESSYVTAEVHGVCGG 290

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  188 bits (480), Expect = 7e-59
 Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 36/280 (12%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+  +             +VAL+TG   GIG    ++  K  + V            V  
Sbjct: 27  MNLLSENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVD 86

Query: 61  SL---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL 117
            +   G E   +    DV+K+E++   ++  + +   +DI+VNNAGI+       R+   
Sbjct: 87  EIKSFGYESSGY--AGDVSKKEEISEVINKILTEHKNVDILVNNAGIT-------RDNLF 137

Query: 118 -----SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK 172
                 E+E V   N+  +F+  +  ++ MI    G II+I S+ G  G +G   Y+ SK
Sbjct: 138 LRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSK 197

Query: 173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
             V+G  K++A EL    I VN ++P  +++ +    + E+               +   
Sbjct: 198 AGVIGFTKSLAKELASRNITVNAIAPGFISSDM-TDKISEQ--------------IKKNI 242

Query: 233 MQGTEL----TANDVANAVLFLASDEARYISGTNLMVDGG 268
           +         T  +VAN   FL+SD++ YI+G   ++DGG
Sbjct: 243 ISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 282

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  186 bits (475), Expect = 1e-58
 Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 33/264 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFFC 71
           L G+V+L+TG   GIG +        G+ V I     +    + +++    G +      
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGV-- 62

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINV 128
             ++  EE +  A +        +DI+VNNAGI+     D   +R +   ++E+V  +N+
Sbjct: 63  EMNLLSEESINKAFEEIYNLVDGIDILVNNAGIT----RDKLFLRMSL-LDWEEVLKVNL 117

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            G F   +++ R MI Q  G I++I SV G  G +G   Y+ +K  ++G  K++A EL  
Sbjct: 118 TGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAP 177

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVA 244
             + VN V+P  + T +  A L EE               +    +   L    +  +VA
Sbjct: 178 RNVLVNAVAPGFIETDMT-AVLSEE--------------IKQKYKEQIPLGRFGSPEEVA 222

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           N VLFL S+ A YI+G  + V+GG
Sbjct: 223 NVVLFLCSELASYITGEVIHVNGG 246

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  186 bits (475), Expect = 1e-58
 Identities = 58/286 (20%), Positives = 104/286 (36%), Gaps = 62/286 (21%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
            + +I+G ATGIG +T ++    G ++   D++D                     D++  
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI----------------ADLSTA 45

Query: 79  EDVCSAV-DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E    A+ D+  +    +D +V  AG+                  V  +N  G    M  
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGPQT---------KVLGNVVSVNYFGATELMDA 96

Query: 138 AARIMIPQ---------------------------TKGTIISICSVAGAIGGL-GPHAYT 169
               +                                G      ++    G   G  AY 
Sbjct: 97  FLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA 156

Query: 170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR 229
           GSK+A+    +  AA  G+ G+R+N ++P A  T L L    ++ R  +++  F   + R
Sbjct: 157 GSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL-LQAGLQDPRYGESIAKFVPPMGR 215

Query: 230 NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHS 275
            A         +++A+ + FL S  A Y+ G  +++DGG  +V   
Sbjct: 216 RA-------EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAVMRP 254

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  186 bits (476), Expect = 1e-58
 Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 36/277 (12%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL- 62
           + +       + L  +VA++TG + GIG +      + GA V      +   + +  +  
Sbjct: 14  AQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK 73

Query: 63  --GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL--- 117
             G E        +V     V + V+ T+++FG L+++VNNAGI+       ++      
Sbjct: 74  QAGLEGRGA--VLNVNDATAVDALVESTLKEFGALNVLVNNAGIT-------QDQLAMRM 124

Query: 118 --SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
              E++ V D N+K VF   +   R M+    G I++I SV G+ G  G   Y  +K  V
Sbjct: 125 KDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGV 184

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
            G+ + +A E+G  GI VNCV+P  + T +    LP+E               + A    
Sbjct: 185 AGMTRALAREIGSRGITVNCVAPGFIDTDM-TKGLPQE--------------QQTALKTQ 229

Query: 236 TEL----TANDVANAVLFLASDEARYISGTNLMVDGG 268
             L    +  D+A+AV FLAS +A YI+GT L V+GG
Sbjct: 230 IPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGG 266

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  186 bits (474), Expect = 2e-58
 Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 28/261 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH-CD 74
           L  +VAL+TG + GIG          GA V          ++   S+  +         +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKGV 131
           ++  E + +       +   +DI+VNNAGI+     D   +R ++  E++ V + N+  +
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGIT----RDNLMMRMSE-DEWQSVINTNLSSI 117

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F   K   R M+ +  G IISI SV G+ G  G   Y  +K  V+G +K++A E+    I
Sbjct: 118 FRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNI 177

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAV 247
            VN V+P  +AT +    L +E               ++               D+A AV
Sbjct: 178 TVNVVAPGFIATDMT-DKLTDE--------------QKSFIATKIPSGQIGEPKDIAAAV 222

Query: 248 LFLASDEARYISGTNLMVDGG 268
            FLAS+EA+YI+G  L V+GG
Sbjct: 223 AFLASEEAKYITGQTLHVNGG 243

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  188 bits (480), Expect = 2e-58
 Identities = 65/307 (21%), Positives = 103/307 (33%), Gaps = 54/307 (17%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQV 58
           S        +      VAL+TG A  +G S     H  G  VC+     A   + L   +
Sbjct: 32  SGLVPRGSHMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL 91

Query: 59  CQSLGGEPDTFFCHCDVTKEED-----------------VCSAVDLTVEKFGTLDIMVNN 101
                          D++                         V      +G  D++VNN
Sbjct: 92  NARRPNS--AITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNN 149

Query: 102 AGISG-APCPDIREAD-----------LSEFEKVFDINVKGVFHGMKHAARIMIP----- 144
           A      P     E              +    +F  N    +  +K  A  +       
Sbjct: 150 ASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKH 209

Query: 145 -QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT 203
             T  +II++         LG   YT +K A+ GL ++ A EL    IRVN V P     
Sbjct: 210 RGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 269

Query: 204 GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNL 263
              +  +P                     +   + +A +V++ V+FL S +A+YI+GT +
Sbjct: 270 ---VDDMPPAVWEG---------HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCV 317

Query: 264 MVDGGFT 270
            VDGG++
Sbjct: 318 KVDGGYS 324

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  186 bits (474), Expect = 2e-58
 Identities = 87/260 (33%), Positives = 128/260 (49%), Gaps = 33/260 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+ +LITG ++GIG +  RL HK G+KV I+   +   + +  +L          C++
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIE--VCNL 69

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKGVF 132
             +E         + K   LDI+V NAGI+     D   IR  D  +F+KV DIN+K  F
Sbjct: 70  ANKE----ECSNLISKTSNLDILVCNAGIT----SDTLAIRMKD-QDFDKVIDINLKANF 120

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              + A + MI +  G II+I S+ G  G  G   Y  SK  ++G+ K+++ E+   GI 
Sbjct: 121 ILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGIT 180

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           VN V+P  + + +    L E+               R A +Q   L       DVA AV 
Sbjct: 181 VNAVAPGFIKSDMT-DKLNEK--------------QREAIVQKIPLGTYGIPEDVAYAVA 225

Query: 249 FLASDEARYISGTNLMVDGG 268
           FLAS+ A YI+G  L V+GG
Sbjct: 226 FLASNNASYITGQTLHVNGG 245

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  186 bits (475), Expect = 2e-58
 Identities = 58/264 (21%), Positives = 114/264 (43%), Gaps = 21/264 (7%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCH 72
           L G+ AL+TG   GIG++        GA V I   ++    +  + +     +       
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D+  E+         +EK+  +DI++NN GI      +  +    ++ K+F++N+    
Sbjct: 68  ADLGTEQGC----QDVIEKYPKVDILINNLGIFEPV--EYFDIPDEDWFKLFEVNIMSGV 121

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +   + MI + +G +I I S A  +       Y+ +K   L L++++A       + 
Sbjct: 122 RLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVT 181

Query: 193 VNCVSPYAVAT----GLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVA 244
           VN + P +  T     +  +  P E+ T +     + F+    N   + +       ++A
Sbjct: 182 VNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAE--KRFMK--ENRPTSIIQRLIRPEEIA 237

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           + V FL+S  +  I+G+ L +DGG
Sbjct: 238 HLVTFLSSPLSSAINGSALRIDGG 261

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  187 bits (476), Expect = 2e-58
 Identities = 64/296 (21%), Positives = 101/296 (34%), Gaps = 54/296 (18%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTF 69
                VAL+TG A  +G S     H  G  VC+     A   + L   +           
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS--AI 63

Query: 70  FCHCDVTKEED-----------------VCSAVDLTVEKFGTLDIMVNNAGISG-APCPD 111
               D++                         V      +G  D++VNNA      P   
Sbjct: 64  TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR 123

Query: 112 IREAD-----------LSEFEKVFDINVKGVFHGMKHAARIMIP------QTKGTIISIC 154
             E              +    +F  N    +  +K  A  +         T  +II++ 
Sbjct: 124 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 183

Query: 155 SVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE 214
                   LG   YT +K A+ GL ++ A EL    IRVN V P        +  +P   
Sbjct: 184 DAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL---VDDMPPAV 240

Query: 215 RTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                             +   + +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 241 WEG---------HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  186 bits (474), Expect = 5e-58
 Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 27/262 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA------DVQDNLGQQVCQSLGGEPDT 68
           +L G+  LITGG +GIG +    F K GA + IA      D  +   +Q  +  G +   
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANET--KQYVEKEGVKCVL 101

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                D++ E+     V  TV + G+L+I+VNN      P   +      + EK F IN+
Sbjct: 102 L--PGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQ-YPQQGLEYITAEQLEKTFRINI 158

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
              FH  K A   +  +    II+  S+    G      Y+ +K A++   ++++  L +
Sbjct: 159 FSYFHVTKAALSHL--KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQ 216

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA--RNANMQGTELTANDVANA 246
            GIRVN V+P  + T L  +   E++     +  F + V   R            ++A A
Sbjct: 217 KGIRVNGVAPGPIWTPLIPSSFDEKK-----VSQFGSNVPMQRPG-------QPYELAPA 264

Query: 247 VLFLASDEARYISGTNLMVDGG 268
            ++LAS ++ Y++G  + V+GG
Sbjct: 265 YVYLASSDSSYVTGQMIHVNGG 286

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  184 bits (470), Expect = 5e-58
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 37/266 (13%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQV---CQSLGGEPDTFFC 71
           L G+VAL+TG + GIG +      K GA V +     +    +V    + LG +      
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAV-- 59

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDI 126
             DV   EDV + V  TV+ FG +DI+VNNAG++       ++  L      E++ V + 
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGVT-------KDNLLMRMKEEEWDTVINT 112

Query: 127 NVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
           N+KGVF   K  +R M+ Q  G I++I SV G  G  G   Y  +K  V+GL K  A EL
Sbjct: 113 NLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKEL 172

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TAND 242
               I VN ++P  +AT +    L E                +   ++         A D
Sbjct: 173 ASRNITVNAIAPGFIATDM-TDVLDEN--------------IKAEMLKLIPAAQFGEAQD 217

Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           +ANAV F ASD+++YI+G  L VDGG
Sbjct: 218 IANAVTFFASDQSKYITGQTLNVDGG 243

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  184 bits (470), Expect = 6e-58
 Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 33/264 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSL---GGEPDTFFC 71
            + + AL+TG + GIG S      + G  V +         + V + +   G +      
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI-- 59

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINV 128
             +V   ++V + +   V +FG+LD++VNNAGI+     D   +R  +  E++ V D N+
Sbjct: 60  QANVADADEVKAMIKEVVSQFGSLDVLVNNAGIT----RDNLLMRMKE-QEWDDVIDTNL 114

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL  
Sbjct: 115 KGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELAS 174

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVA 244
            GI VN V+P  + + +    L +E               +   +    L       D+A
Sbjct: 175 RGITVNAVAPGFIVSDM-TDALSDE--------------LKEQMLTQIPLARFGQDTDIA 219

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           N V FLASD+A+YI+G  + V+GG
Sbjct: 220 NTVAFLASDKAKYITGQTIHVNGG 243

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  183 bits (468), Expect = 1e-57
 Identities = 55/238 (23%), Positives = 91/238 (38%), Gaps = 24/238 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L  ++A++TG   G+G   V+   +      +    ++L   + +  G EP       D
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHL-AALAEIEGVEP----IESD 56

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           + KE      VD  ++    +D +V+ A +  A    I    ++E+    D+NV      
Sbjct: 57  IVKEVLEEGGVD-KLKNLDHVDTLVHAAAV--ARDTTIEAGSVAEWHAHLDLNVIVPAEL 113

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            +     +     G +I I S AG     G   Y  SKHA+ GL      E    GIRV+
Sbjct: 114 SRQLLPALR-AASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVS 172

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            VSP    T + L  L + + T                     +   ++ANA+ F+  
Sbjct: 173 TVSPGPTNTPM-LQGLMDSQGTN--------------FRPEIYIEPKEIANAIRFVID 215

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  183 bits (468), Expect = 1e-57
 Identities = 80/270 (29%), Positives = 118/270 (43%), Gaps = 37/270 (13%)

Query: 6   STDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE 65
           +T +  A    V R  L+TGG  GIG +  +     G KV +            +  G  
Sbjct: 3   ATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH----------RGSGAP 52

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEK 122
              F    DVT  + V  A     E  G ++++V+NAG+S     D   +R  +  +FEK
Sbjct: 53  KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS----ADAFLMRMTE-EKFEK 107

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           V + N+ G F   + A+R M     G +I I SV+G  G      Y  SK  V+G+ +++
Sbjct: 108 VINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSI 167

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL---- 238
           A EL K  +  N V+P  + T +    L E                +   +Q        
Sbjct: 168 ARELSKANVTANVVAPGYIDTDMT-RALDER--------------IQQGALQFIPAKRVG 212

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
           T  +VA  V FLAS++A YISG  + VDGG
Sbjct: 213 TPAEVAGVVSFLASEDASYISGAVIPVDGG 242

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  181 bits (463), Expect = 6e-57
 Identities = 78/260 (30%), Positives = 118/260 (45%), Gaps = 30/260 (11%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLG--GEPDTFFCHCDV 75
           R ALITG + GIG +      + G  + I         ++V +     G P       ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKGVF 132
            + E   + V    E  G LD +VNNAGI+     D   +R  D  ++E V + N+  VF
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGIT----RDTLLVRMKD-EDWEAVLEANLSAVF 116

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              + A ++M+    G I++I SV G +G  G   Y  SK  ++G  + VA E  + GI 
Sbjct: 117 RTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGIT 176

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           VN V+P  + T +    LP+E               + A ++           +VA AV 
Sbjct: 177 VNAVAPGFIETEMT-ERLPQE--------------VKEAYLKQIPAGRFGRPEEVAEAVA 221

Query: 249 FLASDEARYISGTNLMVDGG 268
           FL S++A YI+G  L VDGG
Sbjct: 222 FLVSEKAGYITGQTLCVDGG 241

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  180 bits (460), Expect = 2e-56
 Identities = 52/264 (19%), Positives = 107/264 (40%), Gaps = 22/264 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP---DTFFCH 72
           + G++A++T G++G+G ++     ++GA++ +        +     +             
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D+ +  D+    +      G  DI+V + G  G       E  + ++++ + +  +   
Sbjct: 65  GDIREPGDIDRLFE-KARDLGGADILVYSTG--GPRPGRFMELGVEDWDESYRLLARSAV 121

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              + AA  M+ +  G ++ I SV               +  V+G+ + +A EL  +G+ 
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181

Query: 193 VNCVSPYAVAT----GLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVA 244
           VN V P  + T     LA         T +         A  +      +       ++A
Sbjct: 182 VNAVLPSLILTDRVRSLAEERARRSGITVEE--------ALKSMASRIPMGRVGKPEELA 233

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           + V FLAS++A +I+G  + VDGG
Sbjct: 234 SVVAFLASEKASFITGAVIPVDGG 257

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  179 bits (457), Expect = 7e-56
 Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 37/260 (14%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
            + R  L+TGG  GIG +  R F   G KV I        +                CD+
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGF----------LAVKCDI 68

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKGVF 132
           T  E V  A     E  G +++++ NAG++     D   +R ++  +F  V + N+ G F
Sbjct: 69  TDTEQVEQAYKEIEETHGPVEVLIANAGVT----KDQLLMRMSE-EDFTSVVETNLTGTF 123

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +K A R M+   KG ++ I SV G +G  G   Y  SK  ++G  +++A ELG   I 
Sbjct: 124 RVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNIT 183

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
            N V+P  V T +    L +E               R   +    L       ++A  V 
Sbjct: 184 FNVVAPGFVDTDMT-KVLTDE--------------QRANIVSQVPLGRYARPEEIAATVR 228

Query: 249 FLASDEARYISGTNLMVDGG 268
           FLASD+A YI+G  + VDGG
Sbjct: 229 FLASDDASYITGAVIPVDGG 248

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  179 bits (457), Expect = 1e-55
 Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 39/282 (13%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG----Q 56
           M    +    P       RVA +TGG  G+G +  R  H  G  V ++  + N       
Sbjct: 9   MGTLEAQTQGPGSM-QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWL 67

Query: 57  QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD 116
              +  G +   +    DV   E      +  +  FG +D+++NNAGI+       R+A 
Sbjct: 68  MHERDAGRDFKAY--AVDVADFESCERCAEKVLADFGKVDVLINNAGIT-------RDAT 118

Query: 117 L-----SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS 171
                  +++ V   ++  +F+  K     M+ +  G I++I SV G+ G  G   Y  +
Sbjct: 119 FMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASA 178

Query: 172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA 231
           K  + G  K +A E  K GI VN VSP  +AT + +  +P++                 A
Sbjct: 179 KAGIHGFTKTLALETAKRGITVNTVSPGYLATAM-VEAVPQD--------------VLEA 223

Query: 232 NMQGT----EL-TANDVANAVLFLASDEARYISGTNLMVDGG 268
            +        L   ++VA  + FL SD+A +++G +L ++GG
Sbjct: 224 KILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGG 265

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  178 bits (454), Expect = 2e-55
 Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 37/267 (13%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG----QQVCQSLGGEPDTFF 70
            +  R+A +TGG  GIG S  +  HK G +V      ++       +  ++LG +     
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS- 68

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFD 125
              +V   +    A D    + G +D++VNNAGI+       R+         +++ V D
Sbjct: 69  -EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGIT-------RDVVFRKMTREDWQAVID 120

Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
            N+  +F+  K     M+ +  G II+I SV G  G  G   Y+ +K  + G   ++A E
Sbjct: 121 TNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQE 180

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TAN 241
           +   G+ VN VSP  + T + +  +  +                   +    +    + +
Sbjct: 181 VATKGVTVNTVSPGYIGTDM-VKAIRPD--------------VLEKIVATIPVRRLGSPD 225

Query: 242 DVANAVLFLASDEARYISGTNLMVDGG 268
           ++ + V +LAS+E+ + +G +  ++GG
Sbjct: 226 EIGSIVAWLASEESGFSTGADFSLNGG 252

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  177 bits (451), Expect = 3e-55
 Identities = 84/264 (31%), Positives = 129/264 (48%), Gaps = 38/264 (14%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSL---GGEPDTFFCHCD 74
            V ++TG + GIG++      K G KV +         ++V + +   GG+  TF    D
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITF--GGD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDINVK 129
           V+KE DV + +   ++ +GT+D++VNNAGI+       R+  L     S++++V D+N+ 
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGIT-------RDTLLIRMKKSQWDEVIDLNLT 112

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           GVF   + A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A E    
Sbjct: 113 GVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASR 172

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVAN 245
            I VN V P  +A+ +  A L E+                   +    L       +VA 
Sbjct: 173 NINVNVVCPGFIASDM-TAKLGED--------------MEKKILGTIPLGRTGQPENVAG 217

Query: 246 AVLFLA-SDEARYISGTNLMVDGG 268
            V FLA S  A YI+G    +DGG
Sbjct: 218 LVEFLALSPAASYITGQAFTIDGG 241

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  178 bits (453), Expect = 3e-55
 Identities = 90/268 (33%), Positives = 131/268 (48%), Gaps = 39/268 (14%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQ---SLGGEPDTF 69
             L  R+AL+TG + GIG +        GAKV +          +V     + GGE    
Sbjct: 24  LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAV 83

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVF 124
               DV++E +V +     +E++G LD++VNNAGI+       R+  L      +++ V 
Sbjct: 84  --KADVSQESEVEALFAAVIERWGRLDVLVNNAGIT-------RDTLLLRMKRDDWQSVL 134

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           D+N+ GVF   + AA+IM+ Q  G II+I SV G +G  G   Y+ +K  V+GL K VA 
Sbjct: 135 DLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAK 194

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTED---AMVGFRNFVARNANMQGTELTAN 241
           EL   GI VN V+P  +AT +  + L  E+  E       G                 A 
Sbjct: 195 ELASRGITVNAVAPGFIATDM-TSELAAEKLLEVIPLGRYG----------------EAA 237

Query: 242 DVANAVLFLASD-EARYISGTNLMVDGG 268
           +VA  V FLA+D  A YI+G  + +DGG
Sbjct: 238 EVAGVVRFLAADPAAAYITGQVINIDGG 265

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  177 bits (450), Expect = 5e-55
 Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 32/258 (12%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R AL+TGGA+G+G +        G +V + D++      +           +   DVT+E
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI-----------YVEGDVTRE 51

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIRE--ADLSEFEKVFDINVKGVFHGMK 136
           EDV  AV    ++   L  +V+ AG+  A     +E    L  F +V ++N+ G F+ ++
Sbjct: 52  EDVRRAVA-RAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 110

Query: 137 HAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            AA  M          +G I++  SVA   G +G  AY  SK  V+ L    A EL  +G
Sbjct: 111 LAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWG 170

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRV  V+P    T L L  LPE+ +   ++     F  R            + A  VL +
Sbjct: 171 IRVVTVAPGLFDTPL-LQGLPEKAK--ASLAAQVPFPPRLG-------RPEEYAALVLHI 220

Query: 251 ASDEARYISGTNLMVDGG 268
              E   ++G  + +DG 
Sbjct: 221 L--ENPMLNGEVVRLDGA 236

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  176 bits (448), Expect = 9e-55
 Identities = 37/256 (14%), Positives = 81/256 (31%), Gaps = 32/256 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           +     ++ GG   +G + +  F K+G  V   D+  N        + G       + + 
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDG-------NKNW 53

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T++E        +  +   +D +   AG   A      +  +   + +   +V       
Sbjct: 54  TEQEQSILEQTASSLQGSQVDGVFCVAGG-WAGGSASSKDFVKNADLMIKQSVWSSAIAA 112

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY--GIRV 193
           K A   +  +  G +    + A          Y  +K AV  L  ++AA+         V
Sbjct: 113 KLATTHL--KPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAV 170

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
             + P  + T +    +P  + +                        + ++  +L   ++
Sbjct: 171 LTIMPVTLDTPMNRKWMPNADHSSWT-------------------PLSFISEHLLKWTTE 211

Query: 254 -EARYISGTNLMVDGG 268
             +R  SG  L +   
Sbjct: 212 TSSRPSSGALLKITTE 227

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  176 bits (449), Expect = 2e-54
 Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 6/195 (3%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCD 74
           + G + LITG   GIG  T   F K  +K+ + D+  +  ++      G          D
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 88

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
            +  ED+ S+      + G + I+VNNAG+      D+      + EK F++NV   F  
Sbjct: 89  CSNREDIYSSAKKVKAEIGDVSILVNNAGV--VYTSDLFATQDPQIEKTFEVNVLAHFWT 146

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL---GKYGI 191
            K     M     G I+++ S AG +      AY  SK A +G +K +  EL      G+
Sbjct: 147 TKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGV 206

Query: 192 RVNCVSPYAVATGLA 206
           +  C+ P  V TG  
Sbjct: 207 KTTCLCPNFVNTGFI 221

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  173 bits (442), Expect = 1e-53
 Identities = 68/271 (25%), Positives = 113/271 (41%), Gaps = 33/271 (12%)

Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEP 66
           A   L G+VAL+TG + GIG +  +     GA V I      +  +    ++ QS GG  
Sbjct: 1   ANSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI-QSNGGS- 58

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKF------GTLDIMVNNAGISG-APCPDIREADLSE 119
             F    ++     V +       +          DI++NNAGI   A   +  E     
Sbjct: 59  -AFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQF--- 114

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
           F+++  +N K  F  ++ A   +  +    II+I S A  I      AY+ +K A+  + 
Sbjct: 115 FDRMVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSMTKGAINTMT 172

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTE 237
             +A +LG  GI VN + P  V T +    L +           + +    +     G  
Sbjct: 173 FTLAKQLGARGITVNAILPGFVKTDMNAELLSDPM--------MKQYATTISAFNRLG-- 222

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGG 268
               D+A+   FLAS ++R+++G  + V GG
Sbjct: 223 -EVEDIADTAAFLASPDSRWVTGQLIDVSGG 252

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  173 bits (441), Expect = 4e-53
 Identities = 44/251 (17%), Positives = 88/251 (35%), Gaps = 30/251 (11%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQV---CQSLGGEPDTF 69
           + L G+  ++TG + GIG        K GA V +    ++ L Q+V   C  LG      
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETL-QKVVSHCLELGA-ASAH 81

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
           +    +         V    +  G LD+++ N   +     ++   D+    K  ++N  
Sbjct: 82  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN--TSLNLFHDDIHHVRKSMEVNFL 139

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG-- 187
                   A   M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E    
Sbjct: 140 SYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 198

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           +  + +       + T  A+                    A +  +        + A  +
Sbjct: 199 RVNVSITLCVLGLIDTETAMK-------------------AVSGIVHMQAAPKEECALEI 239

Query: 248 LFLASDEARYI 258
           +   +     +
Sbjct: 240 IKGGALRQEEV 250

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  171 bits (435), Expect = 2e-52
 Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 24/258 (9%)

Query: 5   NSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQ 60
               + P ++R   R+AL+TG + GIG +  R   + G KV          + L  + C+
Sbjct: 19  QGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAE-CK 77

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           S G         CD++ EED+ S       +   +DI +NNAG+  A    +     S +
Sbjct: 78  SAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL--ARPDTLLSGSTSGW 135

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQ--TKGTIISICSVAG--AIGGLGPHAYTGSKHAVL 176
           + +F++NV  +    + A + M  +    G II+I S++G   +     H Y+ +K+AV 
Sbjct: 136 KDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVT 195

Query: 177 GLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
            L + +  EL   +  IR  C+SP  V T  A     ++   E A   +           
Sbjct: 196 ALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKD--PEKAAATYEQMKC------ 247

Query: 235 GTELTANDVANAVLFLAS 252
              L   DVA AV+++ S
Sbjct: 248 ---LKPEDVAEAVIYVLS 262

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  170 bits (432), Expect = 3e-52
 Identities = 59/260 (22%), Positives = 106/260 (40%), Gaps = 36/260 (13%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           +  +  L+   + GIG +   +  + GA+V I        +++ +  G         CD+
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR----NEELLKRSGHRYVV----CDL 68

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP-DIREADLSEFEKVFDINVKGVFHG 134
            K       +DL  EK   +DI+V NAG    P      E    +F++  D     +   
Sbjct: 69  RK------DLDLLFEKVKEVDILVLNAGG---PKAGFFDELTNEDFKEAIDSLFLNMIKI 119

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +++    M  +  G I++I S +        +    ++ A+ G  K ++ E+  YGI VN
Sbjct: 120 VRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVN 179

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFL 250
           CV+P    T      L EE               +        +       ++A+ V FL
Sbjct: 180 CVAPGWTETERVKELLSEE--------------KKKQVESQIPMRRMAKPEEIASVVAFL 225

Query: 251 ASDEARYISGTNLMVDGGFT 270
            S++A Y++G  ++VDGG +
Sbjct: 226 CSEKASYLTGQTIVVDGGLS 245

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  170 bits (432), Expect = 5e-52
 Identities = 70/253 (27%), Positives = 119/253 (47%), Gaps = 24/253 (9%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSL 62
           ++ T      +  + ++ +ITG ++GIGE+  R F + G  + + A   + L     ++L
Sbjct: 2   ASMTGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-----KAL 56

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK 122
               +T     DVT +    +A+    + +G  D +VNNAG+       I   + +E+++
Sbjct: 57  NLP-NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGM--MLLGQIDTQEANEWQR 113

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           +FD+NV G+ +GM+     M  +  GTII+I S+AG        AY G+K AV  +++NV
Sbjct: 114 MFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENV 173

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ---GTELT 239
             E+    +RV  ++P AV T L             +    +         +   G  L 
Sbjct: 174 REEVAASNVRVMTIAPSAVKTELL------------SHTTSQQIKDGYDAWRVDMGGVLA 221

Query: 240 ANDVANAVLFLAS 252
           A+DVA AVLF   
Sbjct: 222 ADDVARAVLFAYQ 234

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  172 bits (438), Expect = 5e-52
 Identities = 53/276 (19%), Positives = 98/276 (35%), Gaps = 36/276 (13%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV----- 58
              +   P   RL G    ITG + GIG++      K GA + IA        ++     
Sbjct: 31  GRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIY 90

Query: 59  -----CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR 113
                 +++GG+     C  DV  E+ + +AV+  ++KFG +DI+VNNA        +  
Sbjct: 91  TAAEEIEAVGGK--ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASA--ISLTNTL 146

Query: 114 EADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL--GPHAYTGS 171
           +      + + ++N +G +   K     +       I++I               AYT +
Sbjct: 147 DTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIA 206

Query: 172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA 231
           K+ +      +A E  K  I VN + P       A+  L                     
Sbjct: 207 KYGMSMYVLGMAEEF-KGEIAVNALWPKTAIHTAAMDMLGGPGIESQCR----------- 254

Query: 232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDG 267
                    + +A+A   +     +  +G  ++ + 
Sbjct: 255 -------KVDIIADAAYSIFQK-PKSFTGNFVIDEN 282

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  168 bits (428), Expect = 7e-52
 Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 32/240 (13%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFCHC 73
            +VA+ITG + GIGE+  R   + G  + +     D  + +  ++ Q  G E   F+ H 
Sbjct: 2   MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE--VFYHHL 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV+K E V       +E+FG +D++V NAG+       + E    EF ++ ++N+ GV+ 
Sbjct: 60  DVSKAESVEEFSKKVLERFGDVDVVVANAGL--GYFKRLEELSEEEFHEMIEVNLLGVWR 117

Query: 134 GMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            +K     +       +++   V+   I   G   Y  +K A   L +    E     +R
Sbjct: 118 TLKAFLDSLKRTGGLALVTTSDVSARLIPYGG--GYVSTKWAARALVRTFQIE--NPDVR 173

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
              + P AV T                              +   L  +++A AV  L  
Sbjct: 174 FFELRPGAVDTYFGG-------------------SKPGKPKEKGYLKPDEIAEAVRCLLK 214

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  167 bits (426), Expect = 4e-51
 Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 21/240 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCH-C 73
           ++ +V LITG + GIGE   R     GAK+ + A  Q  + + +   +     T      
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARI-EAIATEIRDAGGTALAQVL 60

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           DVT    V +     V+ +G +D++VNNAG+   +P   +    + E+E++ D+N+KGV 
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSP---LAAVKVDEWERMIDVNIKGVL 117

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            G+     IM  Q  G II+I S+           Y  +K AV  ++  +  E     IR
Sbjct: 118 WGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIR 175

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           V CV+P  V + LA     EE              A     +   L   D+A AV  +  
Sbjct: 176 VTCVNPGVVESELAGTITHEETM------------AAMDTYRAIALQPADIARAVRQVIE 223

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  166 bits (423), Expect = 6e-51
 Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 20/243 (8%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCH 72
             L G+VALITG ++GIGE+T R     GA V I A   + L + +   L          
Sbjct: 3   SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKL-RALGDELTAAGAKVHVL 61

Query: 73  -CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV   + V +AV  TVE  G LDI+VNNAGI       + +AD +++ ++ D N+ G+
Sbjct: 62  ELDVADRQGVDAAVASTVEALGGLDILVNNAGI--MLLGPVEDADTTDWTRMIDTNLLGL 119

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            +  + A   ++ ++KGT++ + S+AG +       Y  +K  V   ++ +  E+ + G+
Sbjct: 120 MYMTRAALPHLL-RSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGV 178

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-MQGTE-LTANDVANAVLF 249
           RV  + P    T L               +            +     L A D+A AV +
Sbjct: 179 RVVVIEPGTTDTELR------------GHITHTATKEMYEQRISQIRKLQAQDIAEAVRY 226

Query: 250 LAS 252
             +
Sbjct: 227 AVT 229

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  170 bits (434), Expect = 3e-50
 Identities = 71/276 (25%), Positives = 115/276 (41%), Gaps = 30/276 (10%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG--QQV 58
           +  ++ST  +   + L G+VA++TG A GIG +   +F + GA V   DV       ++V
Sbjct: 196 VGAADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRV 255

Query: 59  CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-TLDIMVNNAGISGAPCPDIREADL 117
              +GG         DVT ++ V        E  G  +DI+VNNAGI+       R+  L
Sbjct: 256 ADKVGGTA----LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGIT-------RDKLL 304

Query: 118 -----SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK 172
                  ++ V  +N+       +           G +I + S+AG  G  G   Y  +K
Sbjct: 305 ANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTK 364

Query: 173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
             ++GL + +A  L   GI +N V+P  + T +    +P   R           V R  N
Sbjct: 365 AGMIGLAEALAPVLADKGITINAVAPGFIETKMT-EAIPLATRE----------VGRRLN 413

Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
                    DVA  + + AS  +  ++G  + V G 
Sbjct: 414 SLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQ 449

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  164 bits (416), Expect = 2e-49
 Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 20/258 (7%)

Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAK----VCIADVQDNLGQQ 57
             S+ +    A +RL  +  LITG + GIG++T   + +        +  A   + L ++
Sbjct: 17  RGSHMSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKL-EE 75

Query: 58  VCQSLGGEPDTFFCH---CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIRE 114
           + +++  E      H    D+T+ E +   ++   ++F  +DI+VNNAG +      + +
Sbjct: 76  LKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDR-VGQ 134

Query: 115 ADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA 174
               + + VFD NV  + +  +    I   +  G I+++ S+AG         Y  SK A
Sbjct: 135 IATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFA 194

Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           V     ++  EL    IRV  ++P  V T  +L      E  E A   +++         
Sbjct: 195 VGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNE--EQAKNVYKDTTP------ 246

Query: 235 GTELTANDVANAVLFLAS 252
              L A+DVA+ +++  S
Sbjct: 247 ---LMADDVADLIVYATS 261

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  162 bits (412), Expect = 5e-49
 Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 15/250 (6%)

Query: 5   NSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLG 63
           + +         +     ITG  +G GE+  R F + G  + +    ++ L Q +   L 
Sbjct: 8   HHSSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERL-QALAGELS 66

Query: 64  GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV 123
            +        DV     + +AVD   E+F TL  ++NNAG++    P  +  DL +++ +
Sbjct: 67  AKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDP-AQSCDLDDWDTM 125

Query: 124 FDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
            D N+KG+ +  +     +I    G +I+++ SVAG     G H Y G+K  V   + N+
Sbjct: 126 VDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNL 185

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
             +L   G+RV  + P    +  +L     ++        +              +   D
Sbjct: 186 RCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ--ARYDKTYAGAHP---------IQPED 234

Query: 243 VANAVLFLAS 252
           +A  + ++ +
Sbjct: 235 IAETIFWIMN 244

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  163 bits (414), Expect = 1e-48
 Identities = 82/292 (28%), Positives = 126/292 (43%), Gaps = 48/292 (16%)

Query: 5   NSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG--------- 55
             T    ++  + GRV ++TG   GIG +    F   GA+V + D+   L          
Sbjct: 14  AQTQGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSA 73

Query: 56  -QQVCQ---SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD 111
            Q V     + GGE        +V   +     +   VE FG LD++VNNAGI       
Sbjct: 74  AQSVVDEITAAGGE--AVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI------- 124

Query: 112 IREADL-----SEFEKVFDINVKGVFHGMKHAARIMIPQTK------GTIISICSVAGAI 160
           +R+  +      EF+ V  +++KG F  M+HAA      +K      G II+  S AG  
Sbjct: 125 VRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ 184

Query: 161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAM 220
           G +G   Y+ +K  +  L    AAE+G+YG+ VN ++P A  T +      E   T+D  
Sbjct: 185 GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPSA-RTRMTETVFAEMMATQDQD 243

Query: 221 VGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
                            +   +V+  V++L S EAR ++G    V+GG   V
Sbjct: 244 FDA--------------MAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRV 281

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  158 bits (403), Expect = 7e-48
 Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 19/236 (8%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           + L+TG   G GE   R F + G KV      Q+ L Q++   LG     +    DV   
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL-QELKDELGDN--LYIAQLDVRNR 58

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
             +   +     ++  +DI+VNNAG++    P   +A + ++E + D N KG+ +  +  
Sbjct: 59  AAIEEMLASLPAEWCNIDILVNNAGLALGMEP-AHKASVEDWETMIDTNNKGLVYMTRAV 117

Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSP 198
              M+ +  G II+I S AG+    G + Y  +K  V   + N+  +L    +RV  + P
Sbjct: 118 LPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177

Query: 199 YAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-MQGTE-LTANDVANAVLFLAS 252
             V              TE + V F+    +     Q T  LT  DV+ AV ++++
Sbjct: 178 GLVGG------------TEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVST 221

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  157 bits (399), Expect = 3e-47
 Identities = 44/260 (16%), Positives = 90/260 (34%), Gaps = 22/260 (8%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHK---HGAKVCIADVQDNLGQQVCQSLGGEPDTFF 70
             L   V ++TG + G G +      +    G+ + ++   +++ +Q+ + LG +     
Sbjct: 2   DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK 61

Query: 71  CH---CDVTKEEDVCSAVDLTVEKFGT----LDIMVNNAGISG-APCPDIREADLSEFEK 122
                 D+  E  V   +    E          +++NNA   G      +   DL+E   
Sbjct: 62  VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121

Query: 123 VFDINVKGVFHGMKHAARIMI--PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
            + +N+  +              P    T+++I S+       G   Y   K A   L +
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQ 181

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
            +AAE  +  +RV   +P  +   +      E  +  +     +   +      G  +  
Sbjct: 182 VLAAE--EPSVRVLSYAPGPLDNDMQ-QLARETSKDPELRSKLQKLKS-----DGALVDC 233

Query: 241 NDVANAVLFLASDEARYISG 260
              A  +L L   +  + SG
Sbjct: 234 GTSAQKLLGLLQKDT-FQSG 252

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  162 bits (413), Expect = 2e-46
 Identities = 72/280 (25%), Positives = 113/280 (40%), Gaps = 51/280 (18%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG---------QQVCQ---SL 62
               +V +ITG   G+G+     F K GAKV + D+   L            V       
Sbjct: 5   DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN 64

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-----DL 117
           GG       + +V    D    V+  V+ FGT+ +++NNAGI       +R+A       
Sbjct: 65  GGV--AVADYNNVL---DGDKIVETAVKNFGTVHVIINNAGI-------LRDASMKKMTE 112

Query: 118 SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG 177
            +++ V D+++ G F   K A      Q  G I++  S AG  G  G   Y  +K A+LG
Sbjct: 113 KDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLG 172

Query: 178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
             + +A E  KY I+ N ++P A  + +  + +P                         +
Sbjct: 173 FAETLAKEGAKYNIKANAIAPLA-RSRMTESIMPPPML--------------------EK 211

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLR 277
           L    VA  VL+L+S E   ++G    V  GF +     R
Sbjct: 212 LGPEKVAPLVLYLSSAEN-ELTGQFFEVAAGFYAQIRWER 250

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  156 bits (396), Expect = 6e-44
 Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 37/273 (13%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
                +  S      L  +V LITG   G+G+   + F K+GAKV + D +D    +   
Sbjct: 305 RKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVD 362

Query: 61  ---SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD--IREA 115
              + GGE   +    DV   +D  + +   ++K+GT+DI+VNNAGI      D    + 
Sbjct: 363 EIKAAGGE--AWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGI----LRDRSFAKM 414

Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
              E++ V  +++ G F+  + A    + +  G II+I S +G  G  G   Y+ SK  +
Sbjct: 415 SKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGI 474

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           LGL+K +A E  K  I+VN V+P+A  T + L+ + E+++                    
Sbjct: 475 LGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQDK-------------------- 513

Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGG 268
               A+ VA  +++L +D+   ++G    + GG
Sbjct: 514 NLYHADQVAPLLVYLGTDDV-PVTGETFEIGGG 545

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  152 bits (387), Expect = 8e-45
 Identities = 64/275 (23%), Positives = 106/275 (38%), Gaps = 51/275 (18%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG---------QQVCQ---SL 62
           R  GRV L+TG   G+G +    F + GA V + D+  +            +V +     
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-----DL 117
           GG+      +  V   E     V   ++ FG +D++VNNAGI       +R+        
Sbjct: 66  GGK--AVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGI-------LRDRSFSRISD 113

Query: 118 SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG 177
            +++ +  ++++G F   + A   M  Q  G II   S +G  G  G   Y+ +K  +LG
Sbjct: 114 EDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLG 173

Query: 178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
           L   +  E  K  I  N ++P A  + +    +PE+                        
Sbjct: 174 LANTLVIEGRKNNIHCNTIAPNA-GSRMTETVMPEDLV--------------------EA 212

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
           L    VA  VL+L  +     +G    V  G+   
Sbjct: 213 LKPEYVAPLVLWLCHESC-EENGGLFEVGAGWIGK 246

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  148 bits (375), Expect = 6e-44
 Identities = 42/251 (16%), Positives = 90/251 (35%), Gaps = 30/251 (11%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           + +ITG ++G+G    +L+   G    +    +  L   V   L       +   D+   
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL-STVTNCLSNN--VGYRARDLASH 59

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           ++V    +   +       +V++AG        ++E D  + + + + N+    + ++  
Sbjct: 60  QEVEQLFE---QLDSIPSTVVHSAGS--GYFGLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSP 198
            +    Q    ++ I S A          Y   K AV GL ++V  EL    +++  V P
Sbjct: 115 VKRYKDQ-PVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYP 173

Query: 199 YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR-Y 257
             +AT          E +  ++                 ++A D A  +    ++    Y
Sbjct: 174 GGMATEFW-------ETSGKSLDTSS------------FMSAEDAALMIHGALANIGNGY 214

Query: 258 ISGTNLMVDGG 268
           +S   +  +G 
Sbjct: 215 VSDITVNREGH 225

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  146 bits (369), Expect = 4e-40
 Identities = 73/293 (24%), Positives = 115/293 (39%), Gaps = 51/293 (17%)

Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV---------QD 52
            + +   SS    R  GRVA++TG   G+G     LF + GAKV + D+           
Sbjct: 3   HHHHHMSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQ 62

Query: 53  NLGQQVCQ---SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPC 109
                V       GGE      +  V     V   ++  ++ FG +DI+VNNAGI     
Sbjct: 63  RAADIVVDEIRKAGGE--AVADYNSVIDGAKV---IETAIKAFGRVDILVNNAGI----- 112

Query: 110 PDIREA-----DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG 164
             +R+         ++  V D+++KG F   + A   M  Q  G II   S +G  G  G
Sbjct: 113 --LRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG 170

Query: 165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR 224
              YT +K  ++GL   VA E  +  +  N + P A A+ +    LP+            
Sbjct: 171 QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTA-ASRMTEGILPDILF--------- 220

Query: 225 NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLR 277
                       EL    +A  V +L  +     +G+ +    G+ +  H +R
Sbjct: 221 -----------NELKPKLIAPVVAYLCHESCE-DNGSYIESAAGWATKLHMVR 261

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  136 bits (343), Expect = 3e-38
 Identities = 57/259 (22%), Positives = 99/259 (38%), Gaps = 28/259 (10%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKV-----CIADVQDNLGQQVCQSLGGEPDTFFC- 71
            ++ LITG ++G G  T       G +V      I     +  + +              
Sbjct: 5   KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTL 64

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVK 129
             DV  +  V  A+D  + + G +D++++NAG    G            +F +++DINV 
Sbjct: 65  ELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGP----AEAFTPEQFAELYDINVL 120

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIG---GLGPHAYTGSKHAVLGLNKNVAAEL 186
                 + A   M  Q  G +I I S + A G    L P  Y  +K A+  +    A EL
Sbjct: 121 STQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAP--YFAAKAAMDAIAVQYAREL 178

Query: 187 GKYGIRVNCVSPYAVATGLA----------LAHLPEEERTEDAMVGFRNFVARNANMQGT 236
            ++GI  + + P A  +G             A   E E   +A +G        A +   
Sbjct: 179 SRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLG-EEIKKAFAAIVPP 237

Query: 237 ELTANDVANAVLFLASDEA 255
           +   + VA+A++ +    +
Sbjct: 238 DADVSLVADAIVRVVGTAS 256

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  130 bits (330), Expect = 1e-37
 Identities = 26/190 (13%), Positives = 59/190 (31%), Gaps = 28/190 (14%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
               L+ G +  +G +      K    +       ++                   D+T 
Sbjct: 3   AMKILLIGASGTLGSAVKERLEKKAEVITAGRHSGDV-----------------TVDITN 45

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGMK 136
            + +        E+ G +D +V+  G +  +P  ++               + G  + + 
Sbjct: 46  IDSI----KKMYEQVGKVDAIVSATGSATFSPLTELTPEK---NAVTISSKLGGQINLVL 98

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
                +  +  G+      +      +   +   +  AV    K+ A E+ + GIR+N V
Sbjct: 99  LGIDSLNDK--GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTV 155

Query: 197 SPYAVATGLA 206
           SP  +     
Sbjct: 156 SPNVLEESWD 165

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  129 bits (326), Expect = 6e-37
 Identities = 45/236 (19%), Positives = 79/236 (33%), Gaps = 37/236 (15%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
            LITG   G+G +  R     G  + ++  +     ++ + +G          D+  E  
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVGARALP----ADLADEL- 55

Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
                   +E+ G LD++V+  G +G     +REA     E++   ++      +KH   
Sbjct: 56  ---EAKALLEEAGPLDLLVHAVGKAGRA--SVREAGRDLVEEMLAAHLLTAAFVLKH--- 107

Query: 141 IMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA 200
               Q     +   +    +   G  AY  +K A+    +    EL + G+ +  V   A
Sbjct: 108 -ARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPA 166

Query: 201 VATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
           VATG                       A         L+  + A  VL     E  
Sbjct: 167 VATG---------------------LWAPLGGPPKGALSPEEAARKVLEGLFREPV 201

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  131 bits (331), Expect = 7e-37
 Identities = 56/251 (22%), Positives = 95/251 (37%), Gaps = 15/251 (5%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-HCDVTK 77
           +V L+TG ++G G +        G  V I   +    + +   +   PD       DVT 
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTV-IGTARR--TEALDDLVAAYPDRAEAISLDVTD 62

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAG--ISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
            E +       + ++G +D++VNNAG    GA      E    E   +F+++V G     
Sbjct: 63  GERIDVVAADVLARYGRVDVLVNNAGRTQVGA----FEETTERELRDLFELHVFGPARLT 118

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M  +  G++++I S  G +   G  AY+ +K A+  L++ +A E+  +GI+V  
Sbjct: 119 RALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLI 178

Query: 196 VSPYAVATG-LALAHLPEEERTEDAMVGFRNFVARNANMQGTELT-ANDVANAVLFLASD 253
           V P A  T           E                    G++       A A+      
Sbjct: 179 VEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDT 238

Query: 254 E---ARYISGT 261
           E    R   G 
Sbjct: 239 EKTPLRLALGG 249

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  125 bits (317), Expect = 2e-34
 Identities = 53/260 (20%), Positives = 87/260 (33%), Gaps = 22/260 (8%)

Query: 19  RVALITGGATGIGESTVRLFHK---HGAKVCIA-----DVQDNLGQQVCQSLGGEPDTFF 70
            V LITG ++GIG               KV  A       Q  L +              
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKV-YATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV   + V +A +   E  G +D++V NAG+ G   P +          V D+NV G
Sbjct: 62  LQLDVRDSKSVAAARERVTE--GRVDVLVCNAGL-GLLGP-LEALGEDAVASVLDVNVVG 117

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
               ++     M  +  G ++   SV G +G      Y  SK A+ GL +++A  L  +G
Sbjct: 118 TVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFG 177

Query: 191 IRVNCVSPYAVATGLA------LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           + ++ +    V T            + +          ++         +       +VA
Sbjct: 178 VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA 237

Query: 245 NAVLFLASDE---ARYISGT 261
              L          RY +  
Sbjct: 238 EVFLTALRAPKPTLRYFTTE 257

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  105 bits (264), Expect = 6e-27
 Identities = 58/321 (18%), Positives = 91/321 (28%), Gaps = 102/321 (31%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCH 72
               R A++TGG  GIG    +    +G  V +       G +  + L      +  F  
Sbjct: 9   VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68

Query: 73  CDVTKEED-VCSAVDLTVEKFGTLDIMVNNAGISGAPCP--------------------- 110
            DVT     + S  D     FG LDI+VNNAG++G                         
Sbjct: 69  LDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKI 128

Query: 111 -------DIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL 163
                  ++        E+   IN  GV    +    ++       I+++ S  G++  +
Sbjct: 129 YEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYV 188

Query: 164 GPH-------------------------------------------AYTGSKHAVLGLNK 180
                                                         AYT SK  +    +
Sbjct: 189 SNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
            +A ++     +VNCV P  V T                M                  TA
Sbjct: 249 VLANKIP--KFQVNCVCPGLVKTE---------------MNYGIGN-----------YTA 280

Query: 241 NDVANAVLFLASDEARYISGT 261
            + A  V+ +A       SG 
Sbjct: 281 EEGAEHVVRIALFPDDGPSGF 301

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 99.3 bits (248), Expect = 4e-25
 Identities = 41/206 (19%), Positives = 72/206 (34%), Gaps = 23/206 (11%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
              ++TG   GIG   V+   K       IA  +D       +S+            VT 
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVL-PLTVTC 62

Query: 78  EEDVCSAVDLTVEKFG--TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF--- 132
           ++ + + V    E  G   L +++NNAG+         E + +   +  D+N   V    
Sbjct: 63  DKSLDTFVSKVGEIVGSDGLSLLINNAGVLL-SYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 133 --------HGMKHAARIMIPQTKGTIISICSVAGAIG-------GLGPHAYTGSKHAVLG 177
                   +     +   +  ++  +I+I S  G+I             AY  SK A+  
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 178 LNKNVAAELGKYGIRVNCVSPYAVAT 203
             + +A +L    + V    P  V T
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQT 207

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 98.2 bits (245), Expect = 2e-24
 Identities = 53/238 (22%), Positives = 81/238 (34%), Gaps = 55/238 (23%)

Query: 18  GRVALITGGATGIGESTVR-LFHKHGAKVCIA--DVQDNLGQQVCQSLGGE-PDTFFCHC 73
             VAL+TGG  GIG + VR L       V +   DV    GQ   Q L  E     F   
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVT--RGQAAVQQLQAEGLSPRFHQL 61

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D+   + + +  D   +++G LD++VNNAGI+             + E     N  G   
Sbjct: 62  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAF--KVADPTPFHIQAEVTMKTNFFGTRD 119

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIG-------------------------------- 161
                  ++ PQ  G ++++ S+                                     
Sbjct: 120 VCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 177

Query: 162 ---------GLGPHAYTGSKHAVLGLNKNVAAELGKY----GIRVNCVSPYAVATGLA 206
                    G    AY  +K  V  L++  A +L +      I +N   P  V T +A
Sbjct: 178 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA 235

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 96.7 bits (241), Expect = 5e-24
 Identities = 42/222 (18%), Positives = 69/222 (31%), Gaps = 21/222 (9%)

Query: 2   SNSNSTDSSPAVQRLVG-RVALITGGATGIGESTVRLFHKHGAKVC--IADVQDNLGQQV 58
           S+ +   SS  V R       LITG   G+G   V+                ++    + 
Sbjct: 4   SHHHHHHSSGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE 63

Query: 59  CQSLGGEPDTFFCH-CDVTKEEDVCSAVDLTVEKFGT--LDIMVNNAGISGAPCPDIREA 115
            + L            D+   +     V           L+++ NNAGI+      I   
Sbjct: 64  LEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKS-ARITAV 122

Query: 116 DLSEFEKVFDINVKGVF-----------HGMKHAARIMIPQTKGTIISICSVAGAIG--- 161
              E       N                   K      +   +  II++ S+ G+I    
Sbjct: 123 RSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT 182

Query: 162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT 203
             G +AY  SK A+    K+++ +L    I    + P  V T
Sbjct: 183 DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKT 224

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 89.2 bits (222), Expect = 4e-21
 Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 64/283 (22%)

Query: 16  LVGRVALITGGAT------GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           L G+ ALITG A       GI +S    FH+ GA++        L ++V    +  G + 
Sbjct: 19  LEGKRALITGVANERSIAYGIAKS----FHREGAQLAFTYATPKLEKRVREIAKGFGSD- 73

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI--READLSE--FEK 122
                 CDV+ +ED+ +      E +G+LDI+V+   I+ AP  +      D S   F+ 
Sbjct: 74  --LVVKCDVSLDEDIKNLKKFLEENWGSLDIIVH--SIAYAPKEEFKGGVIDTSREGFKI 129

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLG 177
             DI+V      +      ++    G I+++             +Y G++       V+G
Sbjct: 130 AMDISVYS-LIALTRELLPLMEGRNGAIVTL-------------SYYGAEKVVPHYNVMG 175

Query: 178 LNK-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NF 226
           + K      V   A ++ K+G R+N +S   V T LA   +           GF      
Sbjct: 176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKT-LAAYSIT----------GFHLLMEH 224

Query: 227 VARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
             +        +T  DV +  +FL SD AR I+G  + VD G+
Sbjct: 225 TTKVNPFGKP-ITIEDVGDTAVFLCSDWARAITGEVVHVDNGY 266

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 89.2 bits (222), Expect = 5e-21
 Identities = 57/281 (20%), Positives = 109/281 (38%), Gaps = 59/281 (20%)

Query: 16  LVGRVALITGGAT------GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           L  +  +I G A       G+ +       + GAK+     ++   +++    + L   P
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKV----LDQLGAKLVFTYRKERSRKELEKLLEQLNQ-P 84

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVF 124
           +      DV  +E+V +  +   +  G +D + ++   +       R ++ S   F    
Sbjct: 85  EAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQ 144

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGLN 179
           DI+       + H A+ ++P+  G+I++               Y G + A     V+G+ 
Sbjct: 145 DISSYS-LTIVAHEAKKLMPE-GGSIVAT-------------TYLGGEFAVQNYNVMGVA 189

Query: 180 K-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVA 228
           K     NV   A +LG   IRVN +S   + T L+   +           GF      + 
Sbjct: 190 KASLEANVKYLALDLGPDNIRVNAISAGPIRT-LSAKGVG----------GFNTILKEIE 238

Query: 229 RNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
             A ++   +   +V     +L SD +  ++G N+ VD GF
Sbjct: 239 ERAPLKRN-VDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 278

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 88.0 bits (219), Expect = 7e-21
 Identities = 61/278 (21%), Positives = 107/278 (38%), Gaps = 55/278 (19%)

Query: 16  LVGRVALITGGAT------GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF 69
           L G+ AL+ G          I         + GA+V ++   + L  +  +         
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAK----LKEAGAEVALSYQAERLRPEAEKLAEALGGAL 61

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDIN 127
               DVT++E++ +      E FG LD +V+    +     + R  D     +    +++
Sbjct: 62  LFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVS 121

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGLNK-- 180
                  +   A  ++ +  G I+++              Y  S+       V+ + K  
Sbjct: 122 AYS-LVAVARRAEPLLRE-GGGIVTL-------------TYYASEKVVPKYNVMAIAKAA 166

Query: 181 ---NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVARNA 231
              +V   A ELG  G+RVN +S   V T +A   +P          GF    + VA+ A
Sbjct: 167 LEASVRYLAYELGPKGVRVNAISAGPVRT-VAARSIP----------GFTKMYDRVAQTA 215

Query: 232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
            ++   +T  +V N  LFL S  A  I+G  + VD G+
Sbjct: 216 PLRRN-ITQEEVGNLGLFLLSPLASGITGEVVYVDAGY 252

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 87.7 bits (218), Expect = 1e-20
 Identities = 59/280 (21%), Positives = 97/280 (34%), Gaps = 46/280 (16%)

Query: 16  LVGRVALITGGATG--IGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGGEPDTFFCH 72
           L G+  L++G  T   I     R+  + GA++ +       L Q++   L  +       
Sbjct: 5   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLL--E 62

Query: 73  CDVTKEEDVCSAVDLTVEKFGT---LDIMVNNAGISGAPCPDIREADLSE-----FEKVF 124
            DV  EE + S      E  G    LD +V+   I   P   +      +       K  
Sbjct: 63  LDVQNEEHLASLAGRVTEAIGAGNKLDGVVH--SIGFMPQTGMGINPFFDAPYADVSKGI 120

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA----VLGLNK 180
            I+    +  M  A   ++              G+I G+    +  S+       + + K
Sbjct: 121 HISAYS-YASMAKALLPIMNP-----------GGSIVGM---DFDPSRAMPAYNWMTVAK 165

Query: 181 -----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVAR 229
                     A E GKYG+R N V+   + T LA++ +      E+A    +       +
Sbjct: 166 SALESVNRFVAREAGKYGVRSNLVAAGPIRT-LAMSAIVGGALGEEAGAQIQLLEEGWDQ 224

Query: 230 NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
            A +      A  VA  V  L SD     +G  +  DGG 
Sbjct: 225 RAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 87.3 bits (217), Expect = 2e-20
 Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 68/285 (23%)

Query: 16  LVGRVALITGGAT------GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF 69
           L G+  LITG  +      GI ++     H+ GA++           +V +         
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKA----MHREGAELAFT-YVGQFKDRVEKLCAEFNPAA 78

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI---------READLSEF 120
              CDV  ++++        + +  LD +V+   I+ AP   +         RE     F
Sbjct: 79  VLPCDVISDQEIKDLFVELGKVWDGLDAIVH--SIAFAPRDQLEGNFIDCVTREG----F 132

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----V 175
               DI+    F  +    R M+     +++++              Y G++ A      
Sbjct: 133 SIAHDISAYS-FAALAKEGRSMMKNRNASMVAL-------------TYIGAEKAMPSYNT 178

Query: 176 LGLNK-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR--- 224
           +G+ K      V   A  LG+ GI+VN VS   + T LA + +            F+   
Sbjct: 179 MGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKT-LAASGIS----------NFKKML 227

Query: 225 NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           ++ A  + ++   +   +V N V FL SD A  I+G  + VD G+
Sbjct: 228 DYNAMVSPLKKN-VDIMEVGNTVAFLCSDMATGITGEVVHVDAGY 271

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 86.1 bits (214), Expect = 5e-20
 Identities = 64/281 (22%), Positives = 109/281 (38%), Gaps = 59/281 (20%)

Query: 16  LVGRVALITGG------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           L GR  ++ G       A GI  S     H+ GA++      + L + V     +L    
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARS----LHEAGARLIFTYAGERLEKSVHELAGTLDRND 60

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVF 124
            +    CDVT + ++ +      E+ G +  + +    +          + +   F    
Sbjct: 61  -SIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAH 119

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGLN 179
           +I+       +  AAR M+ +  G+I+++              Y G +       V+G+ 
Sbjct: 120 NISSYS-LTAVVKAARPMMTE-GGSIVTL-------------TYLGGELVMPNYNVMGVA 164

Query: 180 K-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVA 228
           K     +V   AA+LGK  IRVN +S   + T L+   +            F      + 
Sbjct: 165 KASLDASVKYLAADLGKENIRVNSISAGPIRT-LSAKGIS----------DFNSILKDIE 213

Query: 229 RNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
             A ++ T  T  +V +   FL SD +R I+G NL VD GF
Sbjct: 214 ERAPLRRT-TTPEEVGDTAAFLFSDMSRGITGENLHVDSGF 253

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 85.3 bits (212), Expect = 1e-19
 Identities = 61/278 (21%), Positives = 111/278 (39%), Gaps = 55/278 (19%)

Query: 16  LVGRVALITGGAT------GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF 69
           L G+  LI G A       GI +S        GA +    + ++L ++V          +
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQS----CFNQGATLAFTYLNESLEKRVRPIAQELNSPY 59

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDIN 127
               DV+KEE   S  +   +  G+LD +V++   +     +    + S+  F    +I+
Sbjct: 60  VYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEIS 119

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGLNK-- 180
           V      + +  + ++     +++++              Y GS        V+GL K  
Sbjct: 120 VYS-LIELTNTLKPLLNN-GASVLTLS-------------YLGSTKYMAHYNVMGLAKAA 164

Query: 181 ---NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVARNA 231
               V   A +LGK+ IRVN +S   + T LA + +            FR    +   NA
Sbjct: 165 LESAVRYLAVDLGKHHIRVNALSAGPIRT-LASSGIA----------DFRMILKWNEINA 213

Query: 232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
            ++   ++  +V NA ++L S  +  +SG    VD G+
Sbjct: 214 PLRKN-VSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY 250

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 85.4 bits (212), Expect = 1e-19
 Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 65/283 (22%)

Query: 16  LVGRVALITGG------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           L G+  LI G       A GI ++      + GA++      D L ++V    + LG   
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKA----AREAGAELAFTYQGDALKKRVEPLAEELGAF- 83

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI--READLSE--FEK 122
                HCDV     + +  +   +K+G LD +V+   I  +   ++  R  D SE  F  
Sbjct: 84  --VAGHCDVADAASIDAVFETLEKKWGKLDFLVH--AIGFSDKDELTGRYIDTSEANFTN 139

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLG 177
              I+V      +   A  ++    G+I+++              Y G++       V+G
Sbjct: 140 TMLISVYS-LTAVSRRAEKLMAD-GGSILTLT-------------YYGAEKVMPNYNVMG 184

Query: 178 LNK-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NF 226
           + K     +V   A +LG   IRVN +S   + T LA + +            FR    +
Sbjct: 185 VAKAALEASVKYLAVDLGPQNIRVNAISAGPIKT-LAASGIG----------DFRYILKW 233

Query: 227 VARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
              NA ++ T +T ++V +  L+  SD +R ++G     D G+
Sbjct: 234 NEYNAPLRRT-VTIDEVGDVGLYFLSDLSRSVTGEVHHADSGY 275

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 85.0 bits (211), Expect = 2e-19
 Identities = 66/283 (23%), Positives = 118/283 (41%), Gaps = 65/283 (22%)

Query: 16  LVGRVALITGG------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           + G+  +I G       A GI ++        GA+V +  + +   ++V    +SLG + 
Sbjct: 28  MEGKKGVIIGVANDKSLAWGIAKA----VCAQGAEVALTYLSETFKKRVDPLAESLGVK- 82

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI--READLSE--FEK 122
                 CDV+  E V +   +  E++G+LD +V+   ++ +   ++  R  D S   F  
Sbjct: 83  --LTVPCDVSDAESVDNMFKVLAEEWGSLDFVVH--AVAFSDKNELKGRYVDTSLGNFLT 138

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLG 177
              I+    F  +   A  ++    G+I+++              Y G++       V+G
Sbjct: 139 SMHISCYS-FTYIASKAEPLMTN-GGSILTLS-------------YYGAEKVVPHYNVMG 183

Query: 178 LNK-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NF 226
           + K     +V   A +LGK  IRVN +S   V T LA + +            F     +
Sbjct: 184 VCKAALEASVKYLAVDLGKQQIRVNAISAGPVRT-LASSGIS----------DFHYILTW 232

Query: 227 VARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
              N+ ++    T +DV  A L+L SD  R  +G  + VD G+
Sbjct: 233 NKYNSPLRRN-TTLDDVGGAALYLLSDLGRGTTGETVHVDCGY 274

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 84.2 bits (209), Expect = 2e-19
 Identities = 68/288 (23%), Positives = 109/288 (37%), Gaps = 74/288 (25%)

Query: 16  LVGRVALITGG------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           L G+  L+TG       A GI ++      + GA++    V D    ++       G E 
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKA----CKREGAELAFTYVGDRFKDRITEFAAEFGSE- 66

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI---------READL 117
                 CDV  +  + +        + +LD +V+   I  AP   I         RE   
Sbjct: 67  --LVFPCDVADDAQIDALFASLKTHWDSLDGLVH--SIGFAPREAIAGDFLDGLTREN-- 120

Query: 118 SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA--- 174
             F    DI+    F  +  AA  M+     +++++              Y G++ A   
Sbjct: 121 --FRIAHDISAYS-FPALAKAALPMLSD-DASLLTLS-------------YLGAERAIPN 163

Query: 175 --VLGLNK-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR 224
              +GL K     +V   A  LG  G+RVN +S   + T LA + +            F 
Sbjct: 164 YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKT-LAASGIK----------SFG 212

Query: 225 ---NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
              +FV  N+ ++   +T   V NA  FL SD A  ++   + VD GF
Sbjct: 213 KILDFVESNSPLKRN-VTIEQVGNAGAFLLSDLASGVTAEVMHVDSGF 259

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 84.1 bits (209), Expect = 2e-19
 Identities = 69/282 (24%), Positives = 110/282 (39%), Gaps = 62/282 (21%)

Query: 16  LVGRVALITGG------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           L G+  L+TG       A GI ++     H+ GA++      D L  +V      LG + 
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQA----MHREGAELAFTYQNDKLKGRVEEFAAQLGSD- 61

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE---FEKV 123
                 CDV ++  + +      + +   D  V++ G +     D    +      F+  
Sbjct: 62  --IVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIA 119

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGL 178
            DI+    F  M  A R M+      ++++              Y G++ A     V+GL
Sbjct: 120 HDISSYS-FVAMAKACRSMLNP-GSALLTLS-------------YLGAERAIPNYNVMGL 164

Query: 179 NK-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFV 227
            K     NV   A  +G  G+RVN +S   + T LA + +            FR      
Sbjct: 165 AKASLEANVRYMANAMGPEGVRVNAISAGPIRT-LAASGIK----------DFRKMLAHC 213

Query: 228 ARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
                ++ T +T  DV N+  FL SD +  ISG  + VDGGF
Sbjct: 214 EAVTPIRRT-VTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 254

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 57/279 (20%), Positives = 95/279 (34%), Gaps = 60/279 (21%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+   + D    +     R  +ITG  +G+G  T R   + GA V +A      G+   +
Sbjct: 3   MTGWTAAD----LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR 58

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           ++ G+ +      D+     V        +     D+++NNAGI     P     D   F
Sbjct: 59  TMAGQVE--VRELDLQDLSSVRRF----ADGVSGADVLINNAGI--MAVPYALTVD--GF 108

Query: 121 EKVFDINVKGVFHGMKHAA--RIMIPQTKGTIISICSVAGAIGGLGPH------------ 166
           E     N  G      H A   +++P+    ++++ S+A   G +               
Sbjct: 109 ESQIGTNHLG------HFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPW 162

Query: 167 -AYTGSKHAVLGLNKNV--AAELGK------YGIRVNCVSPYAVATGLALAHLPEEERTE 217
            AY+ SK A      N+   +EL +        +R     P    T L       +    
Sbjct: 163 LAYSQSKLA------NLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQ-GASGRKLGDA 215

Query: 218 DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
                 R  VA +A   G        A   L+ AS +  
Sbjct: 216 LMSAATR-VVATDA-DFG--------ARQTLYAASQDLP 244

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 71.3 bits (175), Expect = 1e-14
 Identities = 58/308 (18%), Positives = 102/308 (33%), Gaps = 76/308 (24%)

Query: 16  LVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD------ 67
           L G+ A + G A   G G +  +     GA+V +      LG        G  D      
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 68  -------------------TFFCHCDVTKEEDVCSAVDLTV--------EKFGTLDIMVN 100
                                    D+   +        T+        +  G +DI+V+
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH 126

Query: 101 NAGISGAPCPDIREADLSE--FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG 158
              ++  P       + S   +      +       ++H   IM     G+ +++     
Sbjct: 127 --SLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEG--GSAVTL----- 177

Query: 159 AIGGLGPHAYTGSKHA------VLGLNK-----NV---AAELG-KYGIRVNCVSPYAVAT 203
                   +Y  ++         +   K     +    A E G KYG+RVN +S   + +
Sbjct: 178 --------SYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKS 229

Query: 204 GLALAHLPEEERTE--DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 261
             A + + +       D  +   ++   NA ++   L ++DV  A LFL S  AR +SG 
Sbjct: 230 -RAASAIGKSGEKSFIDYAI---DYSYNNAPLRRD-LHSDDVGGAALFLLSPLARAVSGV 284

Query: 262 NLMVDGGF 269
            L VD G 
Sbjct: 285 TLYVDNGL 292

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 66/311 (21%), Positives = 100/311 (32%), Gaps = 88/311 (28%)

Query: 16  LVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD------ 67
           L G+ A I G A   G G +  +     GA++ +      L         G+ D      
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 68  -------------------TFFCHCDV--------TKEEDVCSAVDLTVEKFGTLDIMVN 100
                                    DV        +    V  A +   + FG++DI+V+
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 101 NAGISGAPCPDIR----EADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV 156
               S A  P++     E     +      +       + H   IM P   G  IS+   
Sbjct: 126 ----SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPG--GASISL--- 176

Query: 157 AGAIGGLGPHAYTGSKHAVLGLN--------------KNVAAELG-KYGIRVNCVSPYAV 201
                      Y  S+  + G                + +A E G K  IRVN +S   +
Sbjct: 177 ----------TYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPL 226

Query: 202 ATGLALAHLPEEERTEDAMVGFR---NFVARNANMQGTELTANDVANAVLFLASDEARYI 258
            +  A            A+        +   NA +Q T LTA++V NA  FL S  A  I
Sbjct: 227 GS-RAAK----------AIGFIDTMIEYSYNNAPIQKT-LTADEVGNAAAFLVSPLASAI 274

Query: 259 SGTNLMVDGGF 269
           +G  + VD G 
Sbjct: 275 TGATIYVDNGL 285

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 66.0 bits (161), Expect = 1e-12
 Identities = 44/230 (19%), Positives = 83/230 (36%), Gaps = 53/230 (23%)

Query: 69  FFCHCDVTKEEDVCSAVDLTV--------EKFGTLDIMVNNAGISGAPCPDI--READLS 118
                +V+  +        T+           G +DI+V+    S A  P++       S
Sbjct: 100 QDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVH----SLANGPEVTKPLLQTS 155

Query: 119 E--FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL 176
              +      +       ++H   +M     G+ +++             +Y  S+  + 
Sbjct: 156 RKGYLAAVSSSSYSFVSLLQHFLPLMKE--GGSALAL-------------SYIASEKVIP 200

Query: 177 GLN--------------KNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEEERTE--DA 219
           G                + +A E G+   +RVNC+S   + +  A + + +       D 
Sbjct: 201 GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKS-RAASAIGKAGDKTFIDL 259

Query: 220 MVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
            +   ++   NA +Q   L ++DV  A LFL S  AR ++G  L VD G 
Sbjct: 260 AI---DYSEANAPLQKE-LESDDVGRAALFLLSPLARAVTGATLYVDNGL 305

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 63.0 bits (153), Expect = 1e-11
 Identities = 22/164 (13%), Positives = 47/164 (28%), Gaps = 15/164 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           + G+ A++  G   +G  +  L    GA+V +   + +  Q    S+           + 
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET 176

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
             +     AV            +             +     + ++    I +   ++  
Sbjct: 177 ADDASRAEAV-------KGAHFVFTAGA------IGLELLPQAAWQNESSIEIVADYNAQ 223

Query: 136 KHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
                  I  T KG         GA+ G+G       +  +  L
Sbjct: 224 PPLGIGGIDATDKGKEYGGKRAFGAL-GIGGLKLKLHRACIAKL 266

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 58.0 bits (140), Expect = 5e-10
 Identities = 47/345 (13%), Positives = 92/345 (26%), Gaps = 117/345 (33%)

Query: 18  GRVALITGGA------TGIGESTVRLFHKHGAKVCIADVQDNLGQQV------------- 58
             +  I G         GI +       K   K+            +             
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKE----LSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMI 57

Query: 59  --------------------CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM 98
                                 +   E        ++ +   +    +L  +K+G ++++
Sbjct: 58  IDKDKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINML 117

Query: 99  VNNAGISGAPCPDI--READLSE--FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC 154
           V+    S A   ++     + S   +      +   +    K+   IM PQ   +IIS+ 
Sbjct: 118 VH----SLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQ--SSIISLT 171

Query: 155 SVAGAIGGLGPHAYTGSKHA------VLGLNK-----NV---AAELG-KYGIRVNCVSPY 199
                        Y  S+         +   K     +    A  LG  Y IR+N +S  
Sbjct: 172 -------------YHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAG 218

Query: 200 AVAT-----------------------------------GLALAHLPEEERTEDAMVGFR 224
            + +                                   G          +    +    
Sbjct: 219 PLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAI 278

Query: 225 NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
            +  + A ++   L + D+ +   FL S E+R I+G  + VD G 
Sbjct: 279 EYSEKYAPLRQK-LLSTDIGSVASFLLSRESRAITGQTIYVDNGL 322

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 48.2 bits (114), Expect = 1e-06
 Identities = 41/304 (13%), Positives = 78/304 (25%), Gaps = 67/304 (22%)

Query: 18  GRVALITGGATGIGEST-VRLFHKHGAKVCI---------------ADVQDNLGQQVCQS 61
            +  L+ G ++G G ++ +      GA                            +  ++
Sbjct: 61  PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA 120

Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-TLDIMVNNAGISGAPCPDIREADLSEF 120
            G    +   + D   +      ++L   + G  +D++V +        P   E   S  
Sbjct: 121 AGLYSKSI--NGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSAL 178

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG---------------LGP 165
           + +                 I       +   I      +GG               L  
Sbjct: 179 KPIGQ-TYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLAD 237

Query: 166 HA------YTGSK-------HAVLGLNK--------NVAAELGKYGIRVNCVSPYAVATG 204
            A      Y G++       H  LG  K         + A L K+G   N     +V T 
Sbjct: 238 GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVT- 296

Query: 205 LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLM 264
            A A +P              +++    +   +         +  L  +      G    
Sbjct: 297 QASAAIP----------VMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERLYRQDGQPAE 346

Query: 265 VDGG 268
           VD  
Sbjct: 347 VDEQ 350

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	280
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.94
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.93
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.93
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.93
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.93
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.93
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.93
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.92
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.92
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.92
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.92
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.91
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.91
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.91
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.91
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.91
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.91
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.9
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.9
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.9
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.9
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.9
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.9
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.9
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.9
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.9
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.9
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.9
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.9
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.89
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.89
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.89
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.89
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.89
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.89
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.89
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.89
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.88
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.88
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.88
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.88
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.88
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.87
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.87
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.87
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.87
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.87
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.87
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.87
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.87
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.86
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.86
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.86
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.85
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.84
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.84
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.84
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.84
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.84
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.83
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.83
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.83
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.82
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.82
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.81
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.81
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.8
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.79
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.78
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.77
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.77
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.74
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.74
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.72
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.69
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.68
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.65
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.65
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.64
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.62
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.61
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.6
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.42
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.38
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.12
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.08
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.94
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.92
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.74
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.68
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.67
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.64
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.6
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.57
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.55
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.55
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.54
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.53
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.51
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.45
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.44
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.33
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.33
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.32
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.32
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.31
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.29
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.27
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.27
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.27
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.26
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.25
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.19
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.17
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.14
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.13
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.12
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.1
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.1
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.08
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.05
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.98
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.98
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.96
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.95
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.93
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.92
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.9
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.9
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.9
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.89
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.87
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.87
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.83
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.81
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.79
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.79
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.79
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.74
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.73
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.69
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.68
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.67
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.62
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.62
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.6
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.6
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.59
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.57
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.54
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.53
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.52
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.5
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.5
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.49
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.48
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.47
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.47
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.45
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.42
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.42
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.38
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.37
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.37
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.36
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.32
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.32
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.31
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.27
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.27
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.2
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.16
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.15
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.13
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.12
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.1
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.1
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	97.07
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.06
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.06
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.0
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.98
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.96
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.91
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.89
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.88
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.86
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.78
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.78
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.75
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.73
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.68
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.68
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.66
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.66
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.65
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.62
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.6
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.59
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.58
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.57
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.47
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.44
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.44
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.39
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.36
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.34
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.33
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.3
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.23
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.22
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.16
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.13
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.11
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.06
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.04
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.03
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.02
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.01
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.99
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.97
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.95
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.93
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.92
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.9
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.9
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.88
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.88
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	95.86
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.81
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.81
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.81
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	95.8
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.78
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.76
1lnq_A	336	MTHK channels, potassium channel related protein;	95.76
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.74
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.71
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.7
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.69
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.66
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.63
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.63
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.6
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.58
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.58
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	95.58
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.56
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.56
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.55
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.54
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.53
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.51
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.5
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.48
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.47
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.45
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.44
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.43
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	95.4
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.39
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	95.37
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.33
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.31
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.2
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.19
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.13

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=7.1e-60  Score=398.00  Aligned_cols=251  Identities=31%  Similarity=0.529  Sum_probs=226.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.. ..++.++.||++++++++++++++.++|
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            479999999999999999999999999999999999999999888888754 3678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      |+||+||||||+.... .++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.++..+.++..+|++||
T Consensus        83 G~iDiLVNNAGi~~~~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asK  161 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGV-TPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAK  161 (254)
T ss_dssp             SCCCEEEECCCCCCTT-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred             CCCCEEEECCcccCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHH
Confidence            9999999999986432 679999999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+.+|+|+||.||+++|||||+|+||+++|++.......++..      ...+ .+..++.+|+.+|+|+|++++||+|
T Consensus       162 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~------~~~~-~~~~~~~~R~g~pediA~~v~fLaS  234 (254)
T 4fn4_A          162 HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELG------MRTL-TKLMSLSSRLAEPEDIANVIVFLAS  234 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHH------HHHH-HHHHTTCCCCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHH------HHHH-HhcCCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999976654432211      1222 2233455999999999999999999


Q ss_pred             CCCCceeecEEEeCCCcccc
Q 023553          253 DEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +.+.|+||++|.+|||++++
T Consensus       235 d~a~~iTG~~i~VDGG~t~~  254 (254)
T 4fn4_A          235 DEASFVNGDAVVVDGGLTVL  254 (254)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             chhcCCcCCEEEeCCCcccC
Confidence            99999999999999999864

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=6.1e-59  Score=392.53  Aligned_cols=249  Identities=28%  Similarity=0.399  Sum_probs=225.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.. ..++.++.||++++++++++++++.++
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999988888777754 357889999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +|+||+||||||+...  .++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||++||.++..+.++..+|++
T Consensus        84 ~G~iDiLVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~a  161 (255)
T 4g81_D           84 GIHVDILINNAGIQYR--KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTA  161 (255)
T ss_dssp             TCCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHH
T ss_pred             CCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHH
Confidence            9999999999999766  899999999999999999999999999999999754 5799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+.+|+|+||.||+++|||||+|+||+++|++.......+        ...++..... |++|+.+|+|+|++++||
T Consensus       162 sKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~--------~~~~~~~~~~-Pl~R~g~pediA~~v~fL  232 (255)
T 4g81_D          162 AKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDK--------QFDSWVKSST-PSQRWGRPEELIGTAIFL  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCH--------HHHHHHHHHS-TTCSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCH--------HHHHHHHhCC-CCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999976543321        1223333333 449999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|+.++|+||++|.+|||+..+
T Consensus       233 ~S~~a~~iTG~~i~VDGG~~Av  254 (255)
T 4g81_D          233 SSKASDYINGQIIYVDGGWLAV  254 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGB
T ss_pred             hCchhCCCcCCEEEECCCeEee
Confidence            9999999999999999998754

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=9.1e-58  Score=386.75  Aligned_cols=257  Identities=26%  Similarity=0.348  Sum_probs=217.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |.++|+||++|||||++|||+++|+.|+++|++|++++|+.+..+...+......++.++.||++++++++++++++.++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998765544332233457889999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ||+||+||||||+...   ...+.+.++|++.+++|+.++++++|+++|+|+++ +|+||++||.++..+.++...|++|
T Consensus        81 ~G~iDiLVNnAGi~~~---~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~as  156 (258)
T 4gkb_A           81 FGRLDGLVNNAGVNDG---IGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCAS  156 (258)
T ss_dssp             HSCCCEEEECCCCCCC---CCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHH
T ss_pred             hCCCCEEEECCCCCCC---CCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHH
Confidence            9999999999998643   34478999999999999999999999999999654 5999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+.+|+|++|.|++++|||||+|+||+++|++.+.........+.   ....+ ....++.+|+.+|+|||++++||+
T Consensus       157 Kaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~---~~~~~-~~~~plg~R~g~peeiA~~v~fLa  232 (258)
T 4gkb_A          157 KGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEA---KLAEI-AAKVPLGRRFTTPDEIADTAVFLL  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------C---HHHHH-HTTCTTTTSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHH---HHHHH-HhcCCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998765443222111   11222 223334358999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcccccCcc
Q 023553          252 SDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      |+.++|+||++|.+|||++.+++|+
T Consensus       233 S~~a~~iTG~~i~VDGG~T~l~~s~  257 (258)
T 4gkb_A          233 SPRASHTTGEWLFVDGGYTHLDRAL  257 (258)
T ss_dssp             SGGGTTCCSCEEEESTTTTTSCTTC
T ss_pred             CchhcCccCCeEEECCCcchhhhhh
Confidence            9999999999999999999998875

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=2.9e-57  Score=385.61  Aligned_cols=250  Identities=27%  Similarity=0.408  Sum_probs=216.9

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |+..|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.  .++..++||++++++++++++++.++
T Consensus        23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG--GGAVGIQADSANLAELDRLYEKVKAE  100 (273)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            4456999999999999999999999999999999999999999998888875  46778899999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +|+||+||||||+...  .++.+.+.++|++++++|+.++++++|+++|+|++  .|+||+++|..+..+.++..+|++|
T Consensus       101 ~G~iDiLVNNAG~~~~--~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~as  176 (273)
T 4fgs_A          101 AGRIDVLFVNAGGGSM--LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAAS  176 (273)
T ss_dssp             HSCEEEEEECCCCCCC--CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHH
Confidence            9999999999998765  88999999999999999999999999999999954  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+.+|+|+||.||+++|||||+|+||+++|++..+.........   +...+..... .|++|+.+|+|+|++++||+
T Consensus       177 Kaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~---~~~~~~~~~~-~PlgR~g~peeiA~~v~FLa  252 (273)
T 4fgs_A          177 KAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQ---QGLLNALAAQ-VPMGRVGRAEEVAAAALFLA  252 (273)
T ss_dssp             HHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHH---HHHHHHHHHH-STTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhh---HHHHHHHHhc-CCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999877654332211   1122222333 34599999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++.|+||++|.+|||.++
T Consensus       253 Sd~a~~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          253 SDDSSFVTGAELFVDGGSAQ  272 (273)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CchhcCccCCeEeECcChhh
Confidence            99999999999999999875

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.6e-56  Score=372.36  Aligned_cols=239  Identities=29%  Similarity=0.401  Sum_probs=208.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.+.  +..+.+. ...++..+.||++|+++++++++     +
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~--~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~   77 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD--ETLDIIAKDGGNASALLIDFADPLAAKDSFT-----D   77 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----T
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH--HHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----h
Confidence            68999999999999999999999999999999999998642  2222222 23578899999999998876664     4


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++||+||||||+...  .++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..+.++..+|++|
T Consensus        78 g~iDiLVNNAGi~~~--~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~as  155 (247)
T 4hp8_A           78 AGFDILVNNAGIIRR--ADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAA  155 (247)
T ss_dssp             TCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHH
Confidence            899999999999866  8899999999999999999999999999999998764 6999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+.+|+|+||.||+++|||||+|+||+++|++......++..        .+.... ..|++|+.+|+|||++++||+
T Consensus       156 Kaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~--------~~~~~~-~~PlgR~g~peeiA~~v~fLa  226 (247)
T 4hp8_A          156 KHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAAR--------NKAILE-RIPAGRWGHSEDIAGAAVFLS  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHH--------HHHHHT-TCTTSSCBCTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHH--------HHHHHh-CCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999997654332211        111122 344599999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcc
Q 023553          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      |++++|+||++|.+|||++
T Consensus       227 Sd~a~~iTG~~i~VDGG~~  245 (247)
T 4hp8_A          227 SAAADYVHGAILNVDGGWL  245 (247)
T ss_dssp             SGGGTTCCSCEEEESTTGG
T ss_pred             CchhcCCcCCeEEECcccc
Confidence            9999999999999999986

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=4.8e-55  Score=364.81  Aligned_cols=233  Identities=29%  Similarity=0.439  Sum_probs=201.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ++||++|||||++|||+++|+.|+++|++|++++|+.+.+++.     ...++..+.||++|+++++++++    ++|+|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~----~~g~i   79 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP-----RHPRIRREELDITDSQRLQRLFE----ALPRL   79 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC-----CCTTEEEEECCTTCHHHHHHHHH----HCSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh-----hcCCeEEEEecCCCHHHHHHHHH----hcCCC
Confidence            5899999999999999999999999999999999998765421     23578889999999999876664    67999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |+||||||+.    .++.+.+.++|++++++|+.++++++|+++|.|+++ .|+||++||.++..+.++...|++||+|+
T Consensus        80 DiLVNNAGi~----~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav  154 (242)
T 4b79_A           80 DVLVNNAGIS----RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAI  154 (242)
T ss_dssp             SEEEECCCCC----CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHH
T ss_pred             CEEEECCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHH
Confidence            9999999985    457789999999999999999999999999998654 59999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      .+|+|+||.||+++|||||+|+||+++|||........+.       ...+ .+. .|++|+.+|+|+|++++||+|+++
T Consensus       155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~-------~~~~-~~~-~PlgR~g~peeiA~~v~fLaSd~a  225 (242)
T 4b79_A          155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEA-------TRRI-MQR-TPLARWGEAPEVASAAAFLCGPGA  225 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHH-------HHHH-HHT-CTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHH-------HHHH-Hhc-CCCCCCcCHHHHHHHHHHHhCchh
Confidence            9999999999999999999999999999998766543221       1112 222 445999999999999999999999


Q ss_pred             CceeecEEEeCCCccc
Q 023553          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      +|+||++|.+|||+..
T Consensus       226 ~~iTG~~l~VDGG~la  241 (242)
T 4b79_A          226 SFVTGAVLAVDGGYLC  241 (242)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCccCceEEECccHhh
Confidence            9999999999999864

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=4.8e-54  Score=360.96  Aligned_cols=230  Identities=27%  Similarity=0.467  Sum_probs=206.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +|+||||||++|||+++|+.|+++|++|++++|+++.+++..++   ..++.+++||++|+++++++++++.+++|+||+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---RPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            59999999999999999999999999999999998877765543   357888999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      ||||||+...  .++.+.+.++|++++++|+.++++++|+++|.|+++ +|+||++||..+..+.++..+|++||+|+.+
T Consensus        79 LVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKaal~~  155 (247)
T 3ged_A           79 LVNNACRGSK--GILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKGGIVA  155 (247)
T ss_dssp             EEECCCCCCC--CGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHHHHHH
Confidence            9999999766  889999999999999999999999999999999765 4999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCc
Q 023553          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~  257 (280)
                      |+|+||.|+++ |||||+|+||+++|++..+....             . . ...|++|+.+|+|||++++||+|+  .|
T Consensus       156 ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~~-------------~-~-~~~Pl~R~g~pediA~~v~fL~s~--~~  217 (247)
T 3ged_A          156 LTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQE-------------D-C-AAIPAGKVGTPKDISNMVLFLCQQ--DF  217 (247)
T ss_dssp             HHHHHHHHHTT-TSEEEEEEECSBCCCC---CCHH-------------H-H-HTSTTSSCBCHHHHHHHHHHHHHC--SS
T ss_pred             HHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHHH-------------H-H-hcCCCCCCcCHHHHHHHHHHHHhC--CC
Confidence            99999999997 99999999999999986544321             1 1 123459999999999999999984  69


Q ss_pred             eeecEEEeCCCccc
Q 023553          258 ISGTNLMVDGGFTS  271 (280)
Q Consensus       258 ~~G~~i~~dgG~~~  271 (280)
                      +||++|.+|||++.
T Consensus       218 iTG~~i~VDGG~s~  231 (247)
T 3ged_A          218 ITGETIIVDGGMSK  231 (247)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CCCCeEEECcCHHH
Confidence            99999999999874

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=2.1e-54  Score=367.17  Aligned_cols=249  Identities=25%  Similarity=0.363  Sum_probs=211.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.+..         ..+..++.||++++++++++++++.+++|
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   77 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG---------LPEELFVEADLTTKEGCAIVAEATRQRLG   77 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---------SCTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC---------CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            479999999999999999999999999999999999986521         12345788999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC-CCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~-~~~~Y~~sK  172 (280)
                      ++|+||||||+......++.+.+.++|++++++|+.++++++|+++|+|++++.|+||+++|..+..+.+ +...|++||
T Consensus        78 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asK  157 (261)
T 4h15_A           78 GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAK  157 (261)
T ss_dssp             SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHH
T ss_pred             CCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHH
Confidence            9999999999875544689999999999999999999999999999999998899999999999999876 578899999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh-hhhhhhHHHHh--hhccCCCCCCCHHHHHHHHHH
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVA--RNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +|+.+|+++||.|++++|||||+|+||+++|++............ ...+...++..  ....|++|+.+|+|||++++|
T Consensus       158 aal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~f  237 (261)
T 4h15_A          158 AALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAF  237 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999998765322111000 00011111111  123456999999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+|++++|+||++|.+|||+..
T Consensus       238 LaS~~a~~itG~~i~VDGG~v~  259 (261)
T 4h15_A          238 LASDRAASITGAEYTIDGGTVP  259 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTCSC
T ss_pred             HhCchhcCccCcEEEECCcCcc
Confidence            9999999999999999999853

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=3.6e-53  Score=359.89  Aligned_cols=249  Identities=19%  Similarity=0.237  Sum_probs=219.1

Q ss_pred             ccccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      |++|+||++|||||++  |||+++|+.|+++|++|++++|+++.+++..+.+..  ..++.++.||+++++++.++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4689999999999865  999999999999999999999999888877776643  347888999999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           89 VEKFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                      .+++|++|++|||||+...  ....+.+.+.++|...+++|+.+++.+++.+.+.+.  +.|+||++||..+..+.++..
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnisS~~~~~~~~~~~  158 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATTYLGGEFAVQNYN  158 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEECGGGTSCCTTTH
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEeccccccCcccch
Confidence            9999999999999998643  124677899999999999999999999999999874  469999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+|+.+|+++||.||+++|||||+|+||+++|++.......++        ..+..... .|++|+.+|+|||++
T Consensus       159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~--------~~~~~~~~-~Pl~R~g~peevA~~  229 (256)
T 4fs3_A          159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNT--------ILKEIKER-APLKRNVDQVEVGKT  229 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHH--------HHHHHHHH-STTSSCCCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHH--------HHHHHHhc-CCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999999876543321        11122233 345999999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCcccc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++||+|++++|+||++|.+|||++.+
T Consensus       230 v~fL~Sd~a~~iTG~~i~VDGG~~av  255 (256)
T 4fs3_A          230 AAYLLSDLSSGVTGENIHVDSGFHAI  255 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHhCchhcCccCCEEEECcCHHhc
Confidence            99999999999999999999999865

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=7.8e-51  Score=347.29  Aligned_cols=257  Identities=24%  Similarity=0.304  Sum_probs=221.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..   ..++.++.||++|++++.++++++.
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999888777666632   2358899999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|+
T Consensus        83 ~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRV--STFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATS  160 (265)
T ss_dssp             HHHCSCSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhH
Confidence            999999999999999765  789999999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh-hccCCCCCCCHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-NANMQGTELTANDVANAVL  248 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~i~  248 (280)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.................+.....+ ...+.+++.+|+|+|++++
T Consensus       161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  240 (265)
T 3lf2_A          161 AARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAIL  240 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999765432111000000111111111 1245599999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ||+++.+.++||++|.+|||++.
T Consensus       241 fL~s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          241 FLASPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HHHSGGGTTCCSEEEEESSSCCC
T ss_pred             HHhCchhcCcCCCEEEECCCCcC
Confidence            99999999999999999999875

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-50  Score=343.90  Aligned_cols=249  Identities=27%  Similarity=0.410  Sum_probs=222.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ++++++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++...  .++.++.||++++++++++++++.
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            456799999999999999999999999999999999999999888877776432  578899999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAY  168 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-~~~~~~~~Y  168 (280)
                      ++++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+. .+.++...|
T Consensus        84 ~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y  161 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFPD--APLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHY  161 (262)
T ss_dssp             HHHSCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHH
T ss_pred             HHhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhh
Confidence            999999999999999765  78899999999999999999999999999999988888999999999986 788899999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.....+.          +.....+. .+.+++.+|+|+|++++
T Consensus       162 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----------~~~~~~~~-~p~~r~~~p~dva~~v~  230 (262)
T 3pk0_A          162 GATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEE----------YIASMARS-IPAGALGTPEDIGHLAA  230 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHH----------HHHHHHTT-STTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHH----------HHHHHHhc-CCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999987643211          11111222 34489999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCccccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ||+++.+.++||++|.+|||+....
T Consensus       231 ~L~s~~~~~itG~~i~vdGG~~~~~  255 (262)
T 3pk0_A          231 FLATKEAGYITGQAIAVDGGQVLPE  255 (262)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTCCS
T ss_pred             HHhCccccCCcCCEEEECCCeecCc
Confidence            9999999999999999999988753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2.7e-50  Score=340.75  Aligned_cols=244  Identities=32%  Similarity=0.484  Sum_probs=219.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+.+..  ...++.+|++|+++++++++++.+++
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD--NGKGMALNVTNPESIEAVLKAITDEF   81 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG--GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc--cceEEEEeCCCHHHHHHHHHHHHHHc
Confidence            3568999999999999999999999999999999999999888887776643  46788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      |++|++|||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus        82 g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (248)
T 3op4_A           82 GGVDILVNNAGITRD--NLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAK  159 (248)
T ss_dssp             CCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHH
Confidence            999999999999865  788999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+++|+++++.|++++||+||+|+||+++|++.+...+.          ....... ..+.+++.+|+|+|++++||++
T Consensus       160 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----------~~~~~~~-~~p~~r~~~p~dva~~v~~L~s  228 (248)
T 3op4_A          160 AGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDE----------QRTATLA-QVPAGRLGDPREIASAVAFLAS  228 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHH----------HHHHHHH-TCTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHH----------HHHHHHh-cCCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999987654221          1111112 2344899999999999999999


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...++||+++.+|||+..
T Consensus       229 ~~~~~itG~~i~vdgG~~~  247 (248)
T 3op4_A          229 PEAAYITGETLHVNGGMYM  247 (248)
T ss_dssp             GGGTTCCSCEEEESTTSSC
T ss_pred             CccCCccCcEEEECCCeec
Confidence            9899999999999999875

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=7.8e-50  Score=342.15  Aligned_cols=254  Identities=29%  Similarity=0.422  Sum_probs=221.9

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .|+.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  ..+.++.+|++++++++++++++.+
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (271)
T 3tzq_B            4 SMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG--RGAVHHVVDLTNEVSVRALIDFTID   81 (271)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC--CCeEEEECCCCCHHHHHHHHHHHHH
Confidence            45667999999999999999999999999999999999999998888877773  4677889999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +++++|++|||||+.......+.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus        82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  161 (271)
T 3tzq_B           82 TFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYAC  161 (271)
T ss_dssp             HHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHH
Confidence            99999999999998744336788999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.....+..         ....... ..+.+++.+|+|+|++++||
T Consensus       162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~---------~~~~~~~-~~~~~r~~~p~dvA~~v~~L  231 (271)
T 3tzq_B          162 TKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQP---------IVDIFAT-HHLAGRIGEPHEIAELVCFL  231 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHH---------HHHHHHT-TSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHH---------HHHHHHh-cCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999876433221         1111222 23458999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccccCcc
Q 023553          251 ASDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      +++...++||++|.+|||+....+.+
T Consensus       232 ~s~~~~~itG~~i~vdGG~~~~~~~~  257 (271)
T 3tzq_B          232 ASDRAAFITGQVIAADSGLLAHLPGL  257 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTTTTBCTTH
T ss_pred             hCcccCCcCCCEEEECCCccccCCCc
Confidence            99999999999999999966555544

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=4e-50  Score=341.19  Aligned_cols=247  Identities=32%  Similarity=0.474  Sum_probs=220.4

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..++.++.+|++|+++++++++++.+
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999888877766643 35788999999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +++++|++|||||+...  .++ +.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++...|++
T Consensus        86 ~~g~id~lv~nAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  162 (256)
T 3gaf_A           86 QFGKITVLVNNAGGGGP--KPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGS  162 (256)
T ss_dssp             HHSCCCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHH
Confidence            99999999999999765  666 899999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.......+         ....... ..+.+++.+|+|+|++++||
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---------~~~~~~~-~~p~~r~~~~~dva~~~~~L  232 (256)
T 3gaf_A          163 SKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPE---------IERAMLK-HTPLGRLGEAQDIANAALFL  232 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHH---------HHHHHHT-TCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHH---------HHHHHHh-cCCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999876543211         1111122 23448999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCccc
Q 023553          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...++||++|.+|||+..
T Consensus       233 ~s~~~~~itG~~i~vdgG~~~  253 (256)
T 3gaf_A          233 CSPAAAWISGQVLTVSGGGVQ  253 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTSCC
T ss_pred             cCCcccCccCCEEEECCCccc
Confidence            999899999999999999865

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.8e-50  Score=346.09  Aligned_cols=250  Identities=28%  Similarity=0.399  Sum_probs=222.9

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .+++++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.. ..++.++.+|+++++++.++++++.+
T Consensus        20 ~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           20 IIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999999888887777643 35788899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus       100 ~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~a  177 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFR--KPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTV  177 (271)
T ss_dssp             HTCCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHH
T ss_pred             HCCCCCEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHH
Confidence            99999999999999765  7889999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.......        +.+..+..... +.+++.+|+|+|++++||
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~~-p~~r~~~pedva~~v~~L  248 (271)
T 4ibo_A          178 AKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN--------PEFDAWVKART-PAKRWGKPQELVGTAVFL  248 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC--------HHHHHHHHHHS-TTCSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC--------HHHHHHHHhcC-CCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999986543211        11222223333 348999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...++||++|.+|||+...
T Consensus       249 ~s~~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          249 SASASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGB
T ss_pred             hCccccCCCCcEEEECCCeecc
Confidence            9998999999999999998753

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.7e-50  Score=343.01  Aligned_cols=256  Identities=30%  Similarity=0.470  Sum_probs=223.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.+++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.. ..++.++.+|+++++++.++++++.++
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999988888887764 357889999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccchh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-~~~~~~~~Y~~  170 (280)
                      ++++|+||||||+.... .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+. .+.++...|++
T Consensus        83 ~g~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  161 (280)
T 3tox_A           83 FGGLDTAFNNAGALGAM-GEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAA  161 (280)
T ss_dssp             HSCCCEEEECCCCCCSC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHH
Confidence            99999999999987432 67889999999999999999999999999999998888999999999998 67888999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.....+....      ......... .+.+++.+|+|+|++++||
T Consensus       162 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~------~~~~~~~~~-~p~~r~~~pedvA~~v~~L  234 (280)
T 3tox_A          162 SKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAP------ETRGFVEGL-HALKRIARPEEIAEAALYL  234 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCT------HHHHHHHTT-STTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCH------HHHHHHhcc-CccCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999987653321111      011222222 3448999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccccCcc
Q 023553          251 ASDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      +++...++||++|.+|||+....+-.
T Consensus       235 ~s~~a~~itG~~i~vdGG~~~~~~a~  260 (280)
T 3tox_A          235 ASDGASFVTGAALLADGGASVTKAAE  260 (280)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGCC---
T ss_pred             hCccccCCcCcEEEECCCcccccccc
Confidence            99988999999999999998876644

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=3.6e-50  Score=343.29  Aligned_cols=247  Identities=26%  Similarity=0.463  Sum_probs=209.6

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ++++++++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+.+.  .++.++.+|++|+++++++++++.
T Consensus        19 ~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           19 PGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG--KDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             --CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--SSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEeecCCHHHHHHHHHHHH
Confidence            445678999999999999999999999999999999999999988888777664  468889999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.++...|+
T Consensus        97 ~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  174 (266)
T 3grp_A           97 REMEGIDILVNNAGITRD--GLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYC  174 (266)
T ss_dssp             HHHTSCCEEEECCCCC-------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHH
Confidence            999999999999999765  778899999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.....+.          ........ .+.+++.+|+|+|++++|
T Consensus       175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~----------~~~~~~~~-~p~~r~~~~edvA~~v~~  243 (266)
T 3grp_A          175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEK----------QKEAIMAM-IPMKRMGIGEEIAFATVY  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHH----------HHHHHHTT-CTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHH----------HHHHHHhc-CCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999997654221          11111222 344899999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++.+.++||++|.+|||+.+
T Consensus       244 L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3grp_A          244 LASDEAAYLTGQTLHINGGMAM  265 (266)
T ss_dssp             HHSGGGTTCCSCEEEESTTC--
T ss_pred             HhCccccCccCCEEEECCCeee
Confidence            9999899999999999999875

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.4e-49  Score=341.54  Aligned_cols=256  Identities=32%  Similarity=0.494  Sum_probs=223.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.  .++.++.+|++++++++++++++.++
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG--SKAFGVRVDVSSAKDAESMVEKTTAK   98 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999988888777754  46788999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus        99 ~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  176 (277)
T 4dqx_A           99 WGRVDVLVNNAGFGTT--GNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVAS  176 (277)
T ss_dssp             HSCCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHH
Confidence            9999999999998765  78889999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++|+++++.|++++||+||+|+||+++|++............    ....... ...+.+++.+|+|+|++++||+
T Consensus       177 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~----~~~~~~~-~~~~~~r~~~pedvA~~v~~L~  251 (277)
T 4dqx_A          177 KGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPA----KLRSDFN-ARAVMDRMGTAEEIAEAMLFLA  251 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHH----HHHHHHH-TTSTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchh----HHHHHHH-hcCcccCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999998543221111100    0111112 2234589999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcccccCcc
Q 023553          252 SDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      ++...++||++|.+|||+...++..
T Consensus       252 s~~~~~itG~~i~vdGG~~~~~~~~  276 (277)
T 4dqx_A          252 SDRSRFATGSILTVDGGSSIGNHLV  276 (277)
T ss_dssp             SGGGTTCCSCEEEESSSSSSCCTTC
T ss_pred             CCccCCCcCCEEEECCchhhhhccC
Confidence            9989999999999999999887654

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=4.7e-50  Score=342.66  Aligned_cols=249  Identities=30%  Similarity=0.417  Sum_probs=221.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .++++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..  ..++.++.||++|+++++++++++.
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   93 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA   93 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999888777666532  3578899999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      ++++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++...|
T Consensus        94 ~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  171 (266)
T 4egf_A           94 EAFGGLDVLVNNAGISHP--QPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAY  171 (266)
T ss_dssp             HHHTSCSEEEEECCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHH
Confidence            999999999999999865  7889999999999999999999999999999998765 6899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++..........        ...... ..+.+++.+|+|+|++++
T Consensus       172 ~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~--------~~~~~~-~~p~~r~~~p~dva~~v~  242 (266)
T 4egf_A          172 CTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAK--------SAPMIA-RIPLGRFAVPHEVSDAVV  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHH--------HHHHHT-TCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHH--------HHHHHh-cCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999997655432111        111122 234589999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ||+++...++||++|.+|||+..
T Consensus       243 ~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          243 WLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhcCccCcEEEECCCccC
Confidence            99999899999999999999875

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1e-49  Score=344.88  Aligned_cols=252  Identities=29%  Similarity=0.410  Sum_probs=223.5

Q ss_pred             CCcccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHH
Q 023553            8 DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus         8 ~~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~   85 (280)
                      ..+..++++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++...  .++.++.||++|++++++++
T Consensus        31 ~~~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~  110 (293)
T 3rih_A           31 AERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAA  110 (293)
T ss_dssp             ---CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHH
T ss_pred             cccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHH
Confidence            3444567899999999999999999999999999999999999999988888887653  47889999999999999999


Q ss_pred             HHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCC
Q 023553           86 DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLG  164 (280)
Q Consensus        86 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-~~~~~  164 (280)
                      +++.++++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+. .+.++
T Consensus       111 ~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~  188 (293)
T 3rih_A          111 RTVVDAFGALDVVCANAGIFPE--ARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPG  188 (293)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTT
T ss_pred             HHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCC
Confidence            9999999999999999999865  78899999999999999999999999999999988888999999999996 78889


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++.....+.          +.....+ ..+.+++.+|+|+|
T Consensus       189 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~----------~~~~~~~-~~p~~r~~~p~dvA  257 (293)
T 3rih_A          189 WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEE----------YISGMAR-SIPMGMLGSPVDIG  257 (293)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHH----------HHHHHHT-TSTTSSCBCHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHH----------HHHHHHh-cCCCCCCCCHHHHH
Confidence            999999999999999999999999999999999999999987654211          1111122 23458999999999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          245 NAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++++||+++.+.++||++|.+|||+...
T Consensus       258 ~~v~fL~s~~a~~itG~~i~vdGG~~~~  285 (293)
T 3rih_A          258 HLAAFLATDEAGYITGQAIVVDGGQVLP  285 (293)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTTTCB
T ss_pred             HHHHHHhCccccCCCCCEEEECCCccCC
Confidence            9999999999999999999999998763

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=3.7e-49  Score=335.60  Aligned_cols=250  Identities=24%  Similarity=0.309  Sum_probs=220.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++|++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++.. ..++.++.+|++++++++++++++.+++++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999997 8888877777776643 357889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+|
T Consensus        83 id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (258)
T 3oid_A           83 LDVFVNNAASGVL--RPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAA  160 (258)
T ss_dssp             CCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHH
Confidence            9999999998765  78899999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++|+++++.|++++||+||+|+||+++|++.......+.        ........ .+.+++.+|+|+|++++||+++.
T Consensus       161 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~p~~r~~~~~dva~~v~~L~s~~  231 (258)
T 3oid_A          161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNRED--------LLEDARQN-TPAGRMVEIKDMVDTVEFLVSSK  231 (258)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHH--------HHHHHHHH-CTTSSCBCHHHHHHHHHHHTSST
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHH--------HHHHHHhc-CCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999876543211        11111222 34489999999999999999999


Q ss_pred             CCceeecEEEeCCCcccccCccc
Q 023553          255 ARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      +.++||++|.+|||+....+.+.
T Consensus       232 ~~~itG~~i~vdGG~~~~~~~~~  254 (258)
T 3oid_A          232 ADMIRGQTIIVDGGRSLLVLEHH  254 (258)
T ss_dssp             TTTCCSCEEEESTTGGGBCC---
T ss_pred             cCCccCCEEEECCCccCCCCCCC
Confidence            99999999999999988766543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=9e-50  Score=337.31  Aligned_cols=244  Identities=31%  Similarity=0.445  Sum_probs=218.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.  .++.++.||++|+++++++++++.+.+|
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG--KKARAIAADISDPGSVKALFAEIQALTG   79 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--TTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            45889999999999999999999999999999999999998888877773  4688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||..+..+.++...|++||
T Consensus        80 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  157 (247)
T 3rwb_A           80 GIDILVNNASIVPF--VAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAK  157 (247)
T ss_dssp             CCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHH
Confidence            99999999999865  7889999999999999999999999999999998765 69999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+++|+++++.|++++||+||+|+||+++|++........         ...+. ....+.+++.+|+|+|++++||++
T Consensus       158 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~---------~~~~~-~~~~~~~r~~~pedva~~v~~L~s  227 (247)
T 3rwb_A          158 GGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNE---------AFGFV-EMLQAMKGKGQPEHIADVVSFLAS  227 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGG---------GHHHH-HHHSSSCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhH---------HHHHH-hcccccCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999876532211         11111 121334889999999999999999


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...++||++|.+|||+..
T Consensus       228 ~~~~~itG~~i~vdGG~~~  246 (247)
T 3rwb_A          228 DDARWITGQTLNVDAGMVR  246 (247)
T ss_dssp             GGGTTCCSCEEEESTTSSC
T ss_pred             ccccCCCCCEEEECCCccC
Confidence            9999999999999999864

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6e-50  Score=341.61  Aligned_cols=257  Identities=23%  Similarity=0.300  Sum_probs=219.8

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      |...+++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.. ..++.++.||++|+++++++++++.+
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            44568999999999999999999999999999999999999888887776643 35788999999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +++++|++|||||+.... .++.+.+.++|++.+++|+.++++++++++|.|.+++ |+||++||..+..+.++...|++
T Consensus        85 ~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~a  162 (264)
T 3ucx_A           85 AYGRVDVVINNAFRVPSM-KPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKM  162 (264)
T ss_dssp             HTSCCSEEEECCCSCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHH
T ss_pred             HcCCCcEEEECCCCCCCC-CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHH
Confidence            999999999999986432 7888999999999999999999999999999997654 99999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhh-hhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++............. ..+........ ..+.+++.+|+|+|++++|
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~p~dvA~~v~~  241 (264)
T 3ucx_A          163 AKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAA-GSDLKRLPTEDEVASAILF  241 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHT-TSSSSSCCBHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhc-cCCcccCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999987654321110000 00111222222 2345899999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...++||++|.+|||.++
T Consensus       242 L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          242 MASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HcCccccCCCCCEEEECCCccC
Confidence            9999899999999999999864

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-49  Score=342.74  Aligned_cols=256  Identities=29%  Similarity=0.408  Sum_probs=218.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .++++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++... .++.++.+|++|+++++++++++.+
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999999888888887643 5788999999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc--cCCCCccc
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI--GGLGPHAY  168 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~--~~~~~~~Y  168 (280)
                      ++|++|++|||||+.... .++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||.++..  +.++...|
T Consensus       102 ~~g~iD~lVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y  180 (283)
T 3v8b_A          102 KFGHLDIVVANAGINGVW-APIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAY  180 (283)
T ss_dssp             HHSCCCEEEECCCCCCCB-CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHH
T ss_pred             HhCCCCEEEECCCCCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHH
Confidence            999999999999986432 678899999999999999999999999999999888889999999999987  77889999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCC--CCCCCHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANA  246 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~  246 (280)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.............  . ...+.. ...+.  +++.+|+|+|++
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~--~-~~~~~~-~~~p~~~~r~~~pedvA~~  256 (283)
T 3v8b_A          181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETA--I-PVEWPK-GQVPITDGQPGRSEDVAEL  256 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHS--C-CCBCTT-CSCGGGTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhh--h-hhhhhh-hcCccccCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999997654322111000  0 000011 11222  889999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCcccc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++||+++.+.++||++|.+|||+...
T Consensus       257 v~fL~s~~a~~itG~~i~vdGG~~~~  282 (283)
T 3v8b_A          257 IRFLVSERARHVTGSPVWIDGGQGLL  282 (283)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHcCccccCCcCCEEEECcCcccc
Confidence            99999999999999999999998753

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=4.7e-50  Score=343.29  Aligned_cols=247  Identities=30%  Similarity=0.438  Sum_probs=219.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      |..++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+.+.. ..++.++.+|++|+++++++++++.+
T Consensus        22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            44568999999999999999999999999999999999999887777666532 34678899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus       102 ~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  179 (270)
T 3ftp_A          102 EFGALNVLVNNAGITQD--QLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAA  179 (270)
T ss_dssp             HHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHH
Confidence            99999999999998865  7788999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.......          ...... ...+.+++.+|+|+|++++||
T Consensus       180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----------~~~~~~-~~~p~~r~~~pedvA~~v~~L  248 (270)
T 3ftp_A          180 AKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQE----------QQTALK-TQIPLGRLGSPEDIAHAVAFL  248 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHH----------HHHHHH-TTCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHH----------HHHHHH-hcCCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999987654221          111112 233458999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCccc
Q 023553          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...++||++|.+|||+..
T Consensus       249 ~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          249 ASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             HSGGGTTCCSCEEEESTTSSC
T ss_pred             hCCCcCCccCcEEEECCCccc
Confidence            999899999999999999864

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=2.2e-49  Score=341.86  Aligned_cols=260  Identities=30%  Similarity=0.402  Sum_probs=215.8

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC----------------cchHHHHHHHhCC-CCCeEEEe
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ----------------DNLGQQVCQSLGG-EPDTFFCH   72 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~----------------~~~~~~~~~~~~~-~~~~~~~~   72 (280)
                      .+|+.+++||++|||||++|||+++|+.|+++|++|++++|+                .+.+++..+.+.. ..++.++.
T Consensus         3 ~~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (286)
T 3uve_A            3 GSMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAE   82 (286)
T ss_dssp             ---CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CCCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEE
Confidence            345667999999999999999999999999999999999887                4555555555543 35788999


Q ss_pred             cCCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEE
Q 023553           73 CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTII  151 (280)
Q Consensus        73 ~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv  151 (280)
                      ||++++++++++++++.+++|++|+||||||+.... .++.+.+.++|++++++|+.++++++++++|.|++++ .|+||
T Consensus        83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv  161 (286)
T 3uve_A           83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG-DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSII  161 (286)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEE
Confidence            999999999999999999999999999999987652 3588999999999999999999999999999997765 68999


Q ss_pred             EEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhh----hhhhhhhHHHH
Q 023553          152 SICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT----EDAMVGFRNFV  227 (280)
Q Consensus       152 ~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~----~~~~~~~~~~~  227 (280)
                      ++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++...........    ...........
T Consensus       162 ~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T 3uve_A          162 LTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPIC  241 (286)
T ss_dssp             EECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHH
T ss_pred             EECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999875311000000    00000011111


Q ss_pred             -hhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          228 -ARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       228 -~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                       .....+ +++++|+|+|++++||+++.+.++||++|.+|||+..
T Consensus       242 ~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          242 QMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             HTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence             112233 7899999999999999999999999999999999864

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=3.5e-49  Score=335.21  Aligned_cols=248  Identities=28%  Similarity=0.416  Sum_probs=217.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.+++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.  .++.++.+|++|++++.++++++.+.+
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG--PRVHALRSDIADLNEIAVLGAAAGQTL   80 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999999988888777663  468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||.++..+.++...|++||
T Consensus        81 g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  156 (255)
T 4eso_A           81 GAIDLLHINAGVSEL--EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASK  156 (255)
T ss_dssp             SSEEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHH
Confidence            999999999999765  78899999999999999999999999999999965  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+++|+++++.|++++||+||+|+||+++|++...........    ..+....... .+.+++.+|+|+|++++||++
T Consensus       157 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~~-~p~~r~~~pedvA~~v~~L~s  231 (255)
T 4eso_A          157 AALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAER----AEFKTLGDNI-TPMKRNGTADEVARAVLFLAF  231 (255)
T ss_dssp             HHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHH----HHHHHHHHHH-STTSSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhH----HHHHHHHhcc-CCCCCCcCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999875432211111    1122222223 345999999999999999999


Q ss_pred             CCCCceeecEEEeCCCcccc
Q 023553          253 DEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~  272 (280)
                      + +.++||+++.+|||+...
T Consensus       232 ~-~~~itG~~i~vdGG~~~~  250 (255)
T 4eso_A          232 E-ATFTTGAKLAVDGGLGQK  250 (255)
T ss_dssp             T-CTTCCSCEEEESTTTTTT
T ss_pred             c-CcCccCCEEEECCCcccc
Confidence            8 889999999999998764

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-49  Score=339.87  Aligned_cols=258  Identities=28%  Similarity=0.405  Sum_probs=215.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------cchHHHHHHHhC-CCCCeEEEecCCCCH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ------------DNLGQQVCQSLG-GEPDTFFCHCDVTKE   78 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~-~~~~~~~~~~D~~~~   78 (280)
                      .+.++++|++|||||++|||+++|+.|+++|++|++++|+            .+.+++..+.+. ...++.++.+|++++
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            4567999999999999999999999999999999999997            334444444443 235788999999999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        79 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      ++++++++++.+.+|++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  161 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTI--ALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG  161 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCC--CCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            99999999999999999999999999765  7889999999999999999999999999999998888899999999999


Q ss_pred             cccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc----chhhhhhhhhhHHHHhhhccCC
Q 023553          159 AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE----EERTEDAMVGFRNFVARNANMQ  234 (280)
Q Consensus       159 ~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  234 (280)
                      ..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.......    ......................
T Consensus       162 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (281)
T 3s55_A          162 HSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY  241 (281)
T ss_dssp             GSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSS
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccC
Confidence            999999999999999999999999999999999999999999999987532100    0000000001111111112222


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       235 ~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++.+|+|+|++++||+++...++||++|.+|||+..
T Consensus       242 ~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  278 (281)
T 3s55_A          242 APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA  278 (281)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc
Confidence            8899999999999999999899999999999999875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=3.1e-49  Score=343.09  Aligned_cols=258  Identities=29%  Similarity=0.415  Sum_probs=215.4

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------cchHHHHHHHhCC-CCCeEEEecCCCCH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ------------DNLGQQVCQSLGG-EPDTFFCHCDVTKE   78 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~-~~~~~~~~~D~~~~   78 (280)
                      |+.+++||++|||||++|||+++|+.|+++|++|++++|+            .+.+++..+++.. ..++.++.||++++
T Consensus        22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  101 (299)
T 3t7c_A           22 MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDF  101 (299)
T ss_dssp             CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence            5567999999999999999999999999999999999987            4555555555432 35788999999999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEcccc
Q 023553           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVA  157 (280)
Q Consensus        79 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~  157 (280)
                      +++.++++++.+.+|++|+||||||+.... .++.+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||..
T Consensus       102 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~  180 (299)
T 3t7c_A          102 DAMQAAVDDGVTQLGRLDIVLANAALASEG-TRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG  180 (299)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCCCCC-CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh
Confidence            999999999999999999999999987652 3488999999999999999999999999999987664 78999999999


Q ss_pred             ccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh----hhhhhhhhHHHH-hhhcc
Q 023553          158 GAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER----TEDAMVGFRNFV-ARNAN  232 (280)
Q Consensus       158 ~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~  232 (280)
                      +..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++..........    .......+.... .....
T Consensus       181 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (299)
T 3t7c_A          181 GLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVL  260 (299)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSS
T ss_pred             hccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhccc
Confidence            9999999999999999999999999999999999999999999999987532110000    000000011111 11222


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       233 ~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      + +++.+|+|+|++++||+++.+.++||++|.+|||+..
T Consensus       261 p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          261 P-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             S-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             C-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            3 7899999999999999999999999999999999864

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.8e-49  Score=339.59  Aligned_cols=252  Identities=30%  Similarity=0.333  Sum_probs=220.1

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      .|++++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++...    ..+.++.+|+++++++.++++
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   83 (281)
T 3svt_A            4 SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVD   83 (281)
T ss_dssp             ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999999999998888777766432    268889999999999999999


Q ss_pred             HHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        87 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                      ++.+.+|++|++|||||+.... .++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||..+..+.++..
T Consensus        84 ~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  162 (281)
T 3svt_A           84 AVTAWHGRLHGVVHCAGGSENI-GPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFG  162 (281)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCT
T ss_pred             HHHHHcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCCh
Confidence            9999999999999999985432 678899999999999999999999999999999888889999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|++
T Consensus       163 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~-~p~~r~~~~~dva~~  233 (281)
T 3svt_A          163 AYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAE--------LSSDYAMC-TPLPRQGEVEDVANM  233 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHH--------HHHHHHHH-CSSSSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHH--------HHHHHHhc-CCCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999998765322111        11111222 344899999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCcccc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++|+++...++||+++.+|||+...
T Consensus       234 ~~~l~s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          234 AMFLLSDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHhCcccCCCCCCEEEeCCChhcc
Confidence            99999998899999999999999876

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=2.3e-49  Score=337.07  Aligned_cols=255  Identities=35%  Similarity=0.458  Sum_probs=218.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |+.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  ..+.++.||+++++++.++++++.++
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~   79 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG--PAAYAVQMDVTRQDSIDAAIAATVEH   79 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999998888877774  45788999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +|++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++
T Consensus        80 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  157 (259)
T 4e6p_A           80 AGGLDILVNNAALFDL--APIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCA  157 (259)
T ss_dssp             SSSCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             cCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHH
Confidence            9999999999999765  7889999999999999999999999999999997765 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhh-hhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++............. ........... ..+.+++++|+|+|++++|
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~~~dva~~v~~  236 (259)
T 4e6p_A          158 TKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGE-AVPFGRMGTAEDLTGMAIF  236 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHH-HSTTSSCBCTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhc-cCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999986543100000000 00011111122 2345899999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...++||++|.+|||+..
T Consensus       237 L~s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          237 LASAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             TTSGGGTTCCSCEEEESTTSSC
T ss_pred             HhCCccCCCCCCEEEECcChhc
Confidence            9999899999999999999864

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-49  Score=340.76  Aligned_cols=257  Identities=30%  Similarity=0.388  Sum_probs=214.2

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-------------CcchHHHHHHHhCC-CCCeEEEecCCC
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-------------QDNLGQQVCQSLGG-EPDTFFCHCDVT   76 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-------------~~~~~~~~~~~~~~-~~~~~~~~~D~~   76 (280)
                      .|+.+++||++|||||++|||+++|+.|+++|++|++++|             +.+.+++..+.+.. ..++.++.+|++
T Consensus         4 ~m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   83 (277)
T 3tsc_A            4 SMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTR   83 (277)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             ccccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence            3556799999999999999999999999999999999998             45555555555432 357889999999


Q ss_pred             CHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEcc
Q 023553           77 KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICS  155 (280)
Q Consensus        77 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS  155 (280)
                      |+++++++++++.++++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++ .|+||++||
T Consensus        84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS  161 (277)
T 3tsc_A           84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAP--QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS  161 (277)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence            9999999999999999999999999999865  7888999999999999999999999999999998765 689999999


Q ss_pred             ccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh-hhhhhhHHHHhhhccCC
Q 023553          156 VAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQ  234 (280)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  234 (280)
                      ..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++............ ...+....... ...+ 
T Consensus       162 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-  239 (277)
T 3tsc_A          162 AAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLT-PFLP-  239 (277)
T ss_dssp             GGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTC-CSSS-
T ss_pred             HhhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhh-hccC-
Confidence            99999999999999999999999999999999999999999999999998654211000000 00000111111 1122 


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       235 ~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .++.+|+|+|++++||+++.+.++||++|.+|||+..
T Consensus       240 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          240 DWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            3789999999999999999999999999999999864

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=2.7e-49  Score=340.18  Aligned_cols=255  Identities=31%  Similarity=0.379  Sum_probs=216.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.. ..++.++.||++|+++++++++++.+++
T Consensus        20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999999999999999999888887777754 3578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHH--hcccCCCceEEEEccccccccCCCCccchh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR--IMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      |++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|  .|++++.|+||++||..+..+.++...|++
T Consensus       100 g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~a  177 (279)
T 3sju_A          100 GPIGILVNSAGRNGG--GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTA  177 (279)
T ss_dssp             CSCCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHH
Confidence            999999999999765  7888999999999999999999999999999  577777899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhh-hhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++............. ............ .+.+++.+|+|+|++++|
T Consensus       178 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~pedvA~~v~~  256 (279)
T 3sju_A          178 SKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAK-IPLGRYSTPEEVAGLVGY  256 (279)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTT-CTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhc-CCCCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999987643110000000 001111222222 344899999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++.+.++||++|.+|||+..
T Consensus       257 L~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          257 LVTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             HTSSGGGGCCSCEEEESTTCCC
T ss_pred             HhCccccCcCCcEEEECCCccC
Confidence            9999899999999999999875

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=5e-49  Score=338.80  Aligned_cols=257  Identities=28%  Similarity=0.488  Sum_probs=211.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++.++++|++|||||++|||+++|+.|+++|++|++++| +.+.+++..+++..  ..++.++.+|++++++++++++++
T Consensus        19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999 55666666665543  357889999999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .+++|++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.++...|
T Consensus        99 ~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  176 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFV--EKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAY  176 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHH
Confidence            9999999999999999765  78899999999999999999999999999999988888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhh--hhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED--AMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.....+.......  ..+........ ..+.+++++|+|+|++
T Consensus       177 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~~edvA~~  255 (281)
T 3v2h_A          177 VAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLK-GQPTKKFITVEQVASL  255 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----------------------------CCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHh-cCCCCCccCHHHHHHH
Confidence            99999999999999999999999999999999999997765432211100  00001111122 2345899999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCccc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++||+++.+.++||++|.+|||+..
T Consensus       256 v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          256 ALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHHHcCCCcCCCCCcEEEECCCccC
Confidence            9999999999999999999999863

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=8.3e-49  Score=335.59  Aligned_cols=265  Identities=26%  Similarity=0.371  Sum_probs=214.4

Q ss_pred             CCCCCCCCCcccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCH
Q 023553            1 MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKE   78 (280)
Q Consensus         1 ~~~~~~~~~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~   78 (280)
                      |+...+...+.++.+++||++|||||++|||+++|++|+++|++|++++++ .+..++..+++.. ..++.++.||++++
T Consensus         1 m~~~~~~~~~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   80 (270)
T 3is3_A            1 MPHVENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQV   80 (270)
T ss_dssp             ----------CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH
T ss_pred             CCCccccccccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH
Confidence            555555555666678999999999999999999999999999999998765 4455555555532 35788999999999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc-
Q 023553           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA-  157 (280)
Q Consensus        79 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~-  157 (280)
                      +++.++++++.++++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|.+  .|+||++||.. 
T Consensus        81 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~  156 (270)
T 3is3_A           81 PEIVKLFDQAVAHFGHLDIAVSNSGVVSF--GHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTS  156 (270)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchh
Confidence            99999999999999999999999999865  78899999999999999999999999999999965  68999999988 


Q ss_pred             ccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh--hhhhhhhhHHHHhhhccCCC
Q 023553          158 GAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVARNANMQG  235 (280)
Q Consensus       158 ~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  235 (280)
                      +..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++..........  .....+......... .+.+
T Consensus       157 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~  235 (270)
T 3is3_A          157 KDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHA-SPLH  235 (270)
T ss_dssp             TTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHH-STTC
T ss_pred             ccCCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhc-CCCC
Confidence            5678888999999999999999999999999999999999999999997632110000  000001122222222 3459


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       236 ~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++.+|+|+|++++||+++.+.++||++|.+|||+.
T Consensus       236 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          236 RNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             CCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCCC
Confidence            99999999999999999999999999999999973

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=3.5e-49  Score=339.12  Aligned_cols=252  Identities=27%  Similarity=0.342  Sum_probs=220.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.+++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..  ..++.++.+|++++++++++++++.+
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3458999999999999999999999999999999999998887776666532  35788999999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus       102 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  179 (277)
T 4fc7_A          102 EFGRIDILINCAAGNFL--CPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGS  179 (277)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHH
T ss_pred             HcCCCCEEEECCcCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHH
Confidence            99999999999998765  7888999999999999999999999999999998877899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++..........       ....... ..+.+++.+|+|+|++++||
T Consensus       180 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~-------~~~~~~~-~~p~~r~~~p~dvA~~v~fL  251 (277)
T 4fc7_A          180 AKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQA-------SLSTKVT-ASPLQRLGNKTEIAHSVLYL  251 (277)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHH-------HHHHHHH-TSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHH-------HHHHHhc-cCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999864432221110       1111122 23458999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccccC
Q 023553          251 ASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      +++.+.++||++|.+|||++...+
T Consensus       252 ~s~~~~~itG~~i~vdGG~~~~~~  275 (277)
T 4fc7_A          252 ASPLASYVTGAVLVADGGAWLTFP  275 (277)
T ss_dssp             HSGGGTTCCSCEEEESTTHHHHCC
T ss_pred             cCCccCCcCCCEEEECCCcccCCC
Confidence            999899999999999999976543

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=6.6e-49  Score=337.32  Aligned_cols=252  Identities=31%  Similarity=0.497  Sum_probs=217.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.  .++.++.+|++|++++.++++++.+++
T Consensus        24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG--CGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             ---CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--SSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            356899999999999999999999999999999999999998888877773  467889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus       102 g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  179 (277)
T 3gvc_A          102 GGVDKLVANAGVVHL--ASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSK  179 (277)
T ss_dssp             SSCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHH
Confidence            999999999999865  788899999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+++|+++++.|++++||+||+|+||+++|++.............  .......  ...+.+++.+|+|+|++++||++
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~r~~~pedvA~~v~~L~s  255 (277)
T 3gvc_A          180 AGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALG--AGGARSM--IARLQGRMAAPEEMAGIVVFLLS  255 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC--------CCHHHH--HHHHHSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHH--HHhhhhh--hhccccCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999986543221000000  0000000  01123789999999999999999


Q ss_pred             CCCCceeecEEEeCCCcccc
Q 023553          253 DEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++.++||++|.+|||+...
T Consensus       256 ~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          256 DDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             GGGTTCCSCEEEESTTGGGS
T ss_pred             CccCCccCcEEEECCcchhc
Confidence            98999999999999998653

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=9.4e-49  Score=330.83  Aligned_cols=243  Identities=33%  Similarity=0.519  Sum_probs=214.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +.+|++|||||++|||+++|+.|+++|++|++++++ .+..++..+++.. ..++.++.+|++|+++++++++++.++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            568999999999999999999999999999998875 4556655555532 35788899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus        82 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (246)
T 3osu_A           82 SLDVLVNNAGITRD--NLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKA  159 (246)
T ss_dssp             CCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence            99999999999765  7888999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+++|+++++.|++++||+||+|+||+++|++.....+.          ....... ..+.+++.+|+|+|+++++|+++
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----------~~~~~~~-~~p~~r~~~~~dva~~v~~l~s~  228 (246)
T 3osu_A          160 GVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDE----------LKEQMLT-QIPLARFGQDTDIANTVAFLASD  228 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHH----------HHHHHHT-TCTTCSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHH----------HHHHHHh-cCCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999987654221          1111122 23448999999999999999999


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...++||+++.+|||+.+
T Consensus       229 ~~~~itG~~i~vdgG~~~  246 (246)
T 3osu_A          229 KAKYITGQTIHVNGGMYM  246 (246)
T ss_dssp             GGTTCCSCEEEESTTSCC
T ss_pred             cccCCCCCEEEeCCCccC
Confidence            899999999999999863

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.6e-49  Score=339.56  Aligned_cols=252  Identities=23%  Similarity=0.339  Sum_probs=199.3

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .|+.++++|++|||||++|||+++|+.|+++|++|++++| +.+.+++..+++.. ..++.++.||++|+++++++++++
T Consensus        22 ~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           22 SMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             -CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            3556789999999999999999999999999999999996 66666666665543 357889999999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC---CceEEEEccccccccCCCC
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~isS~~~~~~~~~~  165 (280)
                      .++++++|+||||||+......++.+.+.++|++.+++|+.++++++++++|.|++++   .|+||++||..+..+.++.
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~  181 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER  181 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc
Confidence            9999999999999998533337888999999999999999999999999999997754   6899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHH
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++.....+..          .........+.+++.+|+|+|+
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----------~~~~~~~~~p~~r~~~pedvA~  251 (280)
T 4da9_A          182 LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY----------DGLIESGLVPMRRWGEPEDIGN  251 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------------CCBCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH----------HHHHhhcCCCcCCcCCHHHHHH
Confidence            999999999999999999999999999999999999999976543221          1111111234489999999999


Q ss_pred             HHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          246 AVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++||+++.+.++||++|.+|||+...
T Consensus       252 ~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          252 IVAGLAGGQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             HHHHHHTSTTGGGTTCEEEESTTCC--
T ss_pred             HHHHHhCccccCCCCCEEEECCCcccC
Confidence            999999999999999999999998764

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.4e-48  Score=331.87  Aligned_cols=249  Identities=27%  Similarity=0.401  Sum_probs=217.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++... .++.++.||+++++++.++++++.+++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999999988888887643 578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcc-cCCCceEEEEccccccccCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      |++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|. +.+.|+||++||..+..+.++...|++|
T Consensus        82 g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (257)
T 3imf_A           82 GRIDILINNAAGNFI--CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAA  159 (257)
T ss_dssp             SCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHH
Confidence            999999999998765  7889999999999999999999999999999994 4457999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHC-CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          172 KHAVLGLNKNVAAELG-KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       172 K~al~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      |+|+++|+++++.|++ ++||+||+|+||+++|++..........       ....... ..+.+++.+|+|+|++++||
T Consensus       160 Kaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~-------~~~~~~~-~~p~~r~~~pedvA~~v~~L  231 (257)
T 3imf_A          160 KAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEE-------MAKRTIQ-SVPLGRLGTPEEIAGLAYYL  231 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------C-------CSHHHHT-TSTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHH-------HHHHHHh-cCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999997 7799999999999999986543211110       0111112 23448999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...++||+++.+|||+...
T Consensus       232 ~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          232 CSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             HSGGGTTCCSCEEEESTTTTSC
T ss_pred             cCchhcCccCCEEEECCCcccC
Confidence            9998999999999999998764

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.6e-48  Score=334.77  Aligned_cols=245  Identities=34%  Similarity=0.501  Sum_probs=216.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.. ..++.++.||++|+++++++++++.++
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999888887777643 357888999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccC--CCCccc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGG--LGPHAY  168 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~--~~~~~Y  168 (280)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.  ++...|
T Consensus       107 ~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y  184 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSV--QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHY  184 (276)
T ss_dssp             HSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHH
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchH
Confidence            9999999999999865  7888999999999999999999999999999998766 4899999999988764  356889


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++......           ....... ..+.+++.+|+|+|++++
T Consensus       185 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-----------~~~~~~~-~~p~~r~~~pedvA~~v~  252 (276)
T 3r1i_A          185 CTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD-----------YHALWEP-KIPLGRMGRPEELTGLYL  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG-----------GHHHHGG-GSTTSSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH-----------HHHHHHh-cCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999998754311           1111122 234489999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ||+++.+.++||++|.+|||+..
T Consensus       253 fL~s~~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          253 YLASAASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHcCccccCccCcEEEECcCccC
Confidence            99999999999999999999863

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=5.9e-49  Score=338.23  Aligned_cols=255  Identities=29%  Similarity=0.419  Sum_probs=214.5

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-------------CcchHHHHHHHhCC-CCCeEEEecCCCC
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-------------QDNLGQQVCQSLGG-EPDTFFCHCDVTK   77 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-------------~~~~~~~~~~~~~~-~~~~~~~~~D~~~   77 (280)
                      ++.+++||++|||||++|||+++|+.|+++|++|++++|             +.+.+++..+.+.. ..++.++.+|+++
T Consensus         9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   88 (280)
T 3pgx_A            9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD   88 (280)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            456799999999999999999999999999999999998             55666666665543 3578899999999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccc
Q 023553           78 EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSV  156 (280)
Q Consensus        78 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~  156 (280)
                      +++++++++++.++++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||.
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSW--GRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSS  166 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcch
Confidence            999999999999999999999999999865  7888999999999999999999999999999998765 7999999999


Q ss_pred             cccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHH-HhhhccCCC
Q 023553          157 AGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF-VARNANMQG  235 (280)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  235 (280)
                      .+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.............  ...... ......+ .
T Consensus       167 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~  243 (280)
T 3pgx_A          167 AGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARH--PSFVHSFPPMPVQP-N  243 (280)
T ss_dssp             GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHC--GGGGGGSCCBTTBC-S
T ss_pred             hhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcC--chhhhhhhhcccCC-C
Confidence            99999999999999999999999999999999999999999999999986532100000000  000000 0011122 3


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       236 ~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++.+|+|+|++++||+++...++||++|.+|||+..
T Consensus       244 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          244 GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            689999999999999999999999999999999864

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-48  Score=333.13  Aligned_cols=244  Identities=27%  Similarity=0.387  Sum_probs=203.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .+.+++|++|||||++|||+++|+.|+++|++|+++++ +.+..++..+.+.. ..++.++.||++++++++++++++.+
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999854 55555555555432 35788899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..+..+.++...|++
T Consensus       102 ~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  177 (267)
T 3u5t_A          102 AFGGVDVLVNNAGIMPL--TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAA  177 (267)
T ss_dssp             HHSCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHH
Confidence            99999999999999765  78899999999999999999999999999999964  589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.......+         ....... ..+.+++.+|+|+|++++||
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---------~~~~~~~-~~p~~r~~~pedvA~~v~~L  247 (267)
T 3u5t_A          178 AKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDE---------VRDRFAK-LAPLERLGTPQDIAGAVAFL  247 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------------CHHHHHT-SSTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHH---------HHHHHHh-cCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999975532221         1111122 23448999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcc
Q 023553          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++...++||++|.+|||+.
T Consensus       248 ~s~~~~~itG~~i~vdGG~~  267 (267)
T 3u5t_A          248 AGPDGAWVNGQVLRANGGII  267 (267)
T ss_dssp             HSTTTTTCCSEEEEESSSCC
T ss_pred             hCccccCccCCEEEeCCCcC
Confidence            99999999999999999973

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=8.1e-49  Score=335.49  Aligned_cols=244  Identities=34%  Similarity=0.537  Sum_probs=214.9

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +.+++++|++|||||++|||+++|+.|+++|++|++++| +.+..++..+.+.. ..++.++.+|++|+++++++++++.
T Consensus        22 ~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           22 TALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             --CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999988 45555555555432 3578889999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +++|++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.++..+.++...|+
T Consensus       102 ~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  179 (269)
T 4dmm_A          102 ERWGRLDVLVNNAGITRD--TLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYS  179 (269)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHH
Confidence            999999999999999865  778899999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|+++++.|++++||+||+|+||+++|++......             .... ...+.+++.+|+|+|++++|
T Consensus       180 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------------~~~~-~~~p~~r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          180 AAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA-------------EKLL-EVIPLGRYGEAAEVAGVVRF  245 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH-------------HHHG-GGCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH-------------HHHH-hcCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999998643211             1111 22345899999999999999


Q ss_pred             hcCC-CCCceeecEEEeCCCccc
Q 023553          250 LASD-EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~-~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++ ...++||+++.+|||+.+
T Consensus       246 l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          246 LAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             HHHCGGGGGCCSCEEEESTTSCC
T ss_pred             HhCCcccCCCcCCEEEECCCeec
Confidence            9997 778999999999999865

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=2.7e-48  Score=330.57  Aligned_cols=255  Identities=32%  Similarity=0.462  Sum_probs=208.1

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      |.++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  .++.++.+|+++.++++++++++.+
T Consensus         2 p~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   79 (261)
T 3n74_A            2 PGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG--DAALAVAADISKEADVDAAVEAALS   79 (261)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHH
Confidence            44567899999999999999999999999999999999999998888877764  4688899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC----CceEEEEccccccccCCCCc
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT----KGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~g~iv~isS~~~~~~~~~~~  166 (280)
                      +++++|++|||||+.... .++.+.+.++|++.+++|+.++++++++++|.|++++    .++||++||..+..+.++..
T Consensus        80 ~~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  158 (261)
T 3n74_A           80 KFGKVDILVNNAGIGHKP-QNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLA  158 (261)
T ss_dssp             HHSCCCEEEECCCCCCCS-CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCH
T ss_pred             hcCCCCEEEECCccCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCcc
Confidence            999999999999987532 6788889999999999999999999999999997653    67899999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+|+++|+++++.|++++||+|++|+||+++|++..........      ........ ..+.+++.+|+|+|++
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~dva~~  231 (261)
T 3n74_A          159 WYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSE------EIRKKFRD-SIPMGRLLKPDDLAEA  231 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------CTTSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcH------HHHHHHhh-cCCcCCCcCHHHHHHH
Confidence            9999999999999999999999999999999999999997765432111      01111122 2344899999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCcccccCc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      +++|+++...++||++|.+|||+...+.+
T Consensus       232 ~~~l~s~~~~~itG~~i~vdgG~~~~~~~  260 (261)
T 3n74_A          232 AAFLCSPQASMITGVALDVDGGRSIGGRS  260 (261)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTTTC----
T ss_pred             HHHHcCCcccCcCCcEEEecCCcccCCCc
Confidence            99999998999999999999999887643

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.5e-48  Score=330.27  Aligned_cols=245  Identities=27%  Similarity=0.435  Sum_probs=198.9

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |++++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++.  .++.++.+|+++++++.++++++.++
T Consensus         1 M~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (257)
T 3tpc_A            1 MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG--AAVRFRNADVTNEADATAALAFAKQE   78 (257)
T ss_dssp             ---CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999988777666553  46788999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCC----CCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC------CCceEEEEcccccccc
Q 023553           92 FGTLDIMVNNAGISGAPCPDI----READLSEFEKVFDINVKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIG  161 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~g~iv~isS~~~~~~  161 (280)
                      +|++|+||||||+...  ..+    .+.+.++|++.+++|+.++++++++++|.|+++      +.|+||++||..+..+
T Consensus        79 ~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~  156 (257)
T 3tpc_A           79 FGHVHGLVNCAGTAPG--EKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG  156 (257)
T ss_dssp             HSCCCEEEECCCCCCC--CCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             cCCCCEEEECCCCCCC--CccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC
Confidence            9999999999998754  333    368899999999999999999999999999874      5789999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHH
Q 023553          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      .++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....+..          ........++.+++.+|+
T Consensus       157 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~----------~~~~~~~~p~~~r~~~~~  226 (257)
T 3tpc_A          157 QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDV----------QDALAASVPFPPRLGRAE  226 (257)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------------CCSSSSCSCBCHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHH----------HHHHHhcCCCCCCCCCHH
Confidence            9999999999999999999999999999999999999999999976543211          111112222238899999


Q ss_pred             HHHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          242 DVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       242 dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+|+++++|++.  .++||+++.+|||+...
T Consensus       227 dva~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          227 EYAALVKHICEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHHHHHHC--TTCCSCEEEESTTCCC-
T ss_pred             HHHHHHHHHccc--CCcCCcEEEECCCccCC
Confidence            999999999975  79999999999998764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=3.5e-48  Score=332.17  Aligned_cols=245  Identities=29%  Similarity=0.429  Sum_probs=211.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++||++|||||++|||+++|+.|+++|++|++++|++ ..++..+++. ...++.++.+|++|++++.++.+. .+.+
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-~~~~  104 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAEE-LAAT  104 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH-HHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-HHhc
Confidence            568999999999999999999999999999999999764 4444445443 345788899999999999999544 4567


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus       105 g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  182 (273)
T 3uf0_A          105 RRVDVLVNNAGIIAR--APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASK  182 (273)
T ss_dssp             SCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             CCCcEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHH
Confidence            999999999999865  788999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+++|+++++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|++++||++
T Consensus       183 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~p~~r~~~pedva~~v~~L~s  253 (273)
T 3uf0_A          183 HAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDE--------RAAEITAR-IPAGRWATPEDMVGPAVFLAS  253 (273)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHH--------HHHHHHHH-STTSSCBCGGGGHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHH--------HHHHHHhc-CCCCCCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999998765322211        11111222 334899999999999999999


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +.+.++||++|.+|||+..
T Consensus       254 ~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          254 DAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhcCCcCCEEEECcCccC
Confidence            9889999999999999864

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=5.6e-49  Score=337.47  Aligned_cols=249  Identities=21%  Similarity=0.295  Sum_probs=218.3

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ++.++++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.. ..++.++.+|+++++++.++++++.
T Consensus        26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (275)
T 4imr_A           26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAE  105 (275)
T ss_dssp             HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            345679999999999999999999999999999999999999888777766643 3578899999999999999999998


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +. +++|++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.+....|+
T Consensus       106 ~~-g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~  182 (275)
T 4imr_A          106 AI-APVDILVINASAQIN--ATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYA  182 (275)
T ss_dssp             HH-SCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             Hh-CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhH
Confidence            87 999999999998765  788999999999999999999999999999999888889999999999999888888899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.........      .....+.. ...+.+++.+|+|+|++++|
T Consensus       183 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~------~~~~~~~~-~~~p~~r~~~pedvA~~v~f  255 (275)
T 4imr_A          183 ATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDP------EGWDEYVR-TLNWMGRAGRPEEMVGAALF  255 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCH------HHHHHHHH-HHSTTCSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccCh------HHHHHHHh-hcCccCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999998654321110      11222222 22244899999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCc
Q 023553          250 LASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~  269 (280)
                      |+++.+.++||++|.+|||+
T Consensus       256 L~s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          256 LASEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             HHSGGGTTCCSCEEEESSCC
T ss_pred             HcCcccCCCCCCEEEeCCCC
Confidence            99999999999999999996

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=6.3e-48  Score=334.32  Aligned_cols=251  Identities=22%  Similarity=0.230  Sum_probs=214.5

Q ss_pred             ccccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ++++++|++|||||++  |||+++|+.|+++|++|++++|+.+..+...+.....+.+.++.||++|+++++++++++.+
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            3568999999999986  99999999999999999999999765444433332223467899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           91 KFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      ++|++|+||||||+...  ...++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.++...|
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~~Y  182 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYNVM  182 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTTHH
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCchhh
Confidence            99999999999998742  0156788999999999999999999999999999965  7999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.......        .......... .+.+++.+|+|+|++++
T Consensus       183 ~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~-~p~~r~~~pedvA~~v~  253 (296)
T 3k31_A          183 GVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDF--------HYILTWNKYN-SPLRRNTTLDDVGGAAL  253 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHH--------HHHHHHHHHH-STTSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccch--------HHHHHHHHhc-CCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999986543211        1112222223 34489999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCcccccC
Q 023553          249 FLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      ||+++.+.++||++|.+|||+...+.
T Consensus       254 fL~s~~a~~itG~~i~vdGG~~~~~~  279 (296)
T 3k31_A          254 YLLSDLGRGTTGETVHVDCGYHVVGM  279 (296)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             HHcCCccCCccCCEEEECCCccccCC
Confidence            99999889999999999999987754

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.2e-47  Score=327.54  Aligned_cols=251  Identities=29%  Similarity=0.388  Sum_probs=214.6

Q ss_pred             CCcccccccCCcEEEEEcCC-ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHH
Q 023553            8 DSSPAVQRLVGRVALITGGA-TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus         8 ~~~~~~~~l~~k~vlItGas-~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~   84 (280)
                      ...+.+.++++|++|||||+ +|||+++|++|+++|++|++++|+.+.+++..+++..  ..++.++.||++++++++++
T Consensus        12 ~~~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   91 (266)
T 3o38_A           12 KEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDAL   91 (266)
T ss_dssp             CCCCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHH
T ss_pred             cccccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHH
Confidence            33334567899999999997 6999999999999999999999999888887777643  25789999999999999999


Q ss_pred             HHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccccCC
Q 023553           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGL  163 (280)
Q Consensus        85 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~~~~  163 (280)
                      ++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|+++ ..++||++||..+..+.+
T Consensus        92 ~~~~~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  169 (266)
T 3o38_A           92 ITQTVEKAGRLDVLVNNAGLGGQ--TPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH  169 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT
T ss_pred             HHHHHHHhCCCcEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC
Confidence            99999999999999999998765  788899999999999999999999999999999876 678999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHH
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV  243 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  243 (280)
                      +...|++||+|+++|++.++.|++++||+|++|+||+++|++.......+.         ...... ..+.+++.+|+|+
T Consensus       170 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---------~~~~~~-~~~~~r~~~~~dv  239 (266)
T 3o38_A          170 SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSEL---------LDRLAS-DEAFGRAAEPWEV  239 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------------------------CCTTSSCCCHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHH---------HHHHHh-cCCcCCCCCHHHH
Confidence            999999999999999999999999999999999999999999765433211         111112 2334899999999


Q ss_pred             HHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          244 ANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       244 a~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+++++|+++...++||++|.+|||++
T Consensus       240 a~~i~~l~s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          240 AATIAFLASDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSCCC
T ss_pred             HHHHHHHcCccccCccCCEEEEcCCcC
Confidence            999999999888999999999999974

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.1e-47  Score=332.37  Aligned_cols=251  Identities=21%  Similarity=0.236  Sum_probs=209.7

Q ss_pred             ccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.+++||++|||||+  +|||+++|+.|+++|++|++++|+.+..+...+......++.++.||++++++++++++++.+
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence            456899999999999  569999999999999999999999654333322222224678899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           91 KFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      +++++|+||||||+...  ...++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.++...|
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y  183 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVM  183 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTHH
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHHH
Confidence            99999999999998751  0167889999999999999999999999999999964  7999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|++++
T Consensus       184 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~p~~r~~~pedvA~~v~  254 (293)
T 3grk_A          184 GVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRY--------ILKWNEYN-APLRRTVTIDEVGDVGL  254 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHH--------HHHHHHHH-STTSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHH--------HHHHHHhc-CCCCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999998765432211        11222222 34489999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCcccccC
Q 023553          249 FLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      ||+++...++||++|.+|||+...+.
T Consensus       255 ~L~s~~~~~itG~~i~vdGG~~~~~~  280 (293)
T 3grk_A          255 YFLSDLSRSVTGEVHHADSGYHVIGM  280 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGBCC
T ss_pred             HHcCccccCCcceEEEECCCcccCCC
Confidence            99999889999999999999987664

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=6e-48  Score=325.91  Aligned_cols=244  Identities=30%  Similarity=0.404  Sum_probs=219.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+.+.. ..++.++.+|++++++++++++++.+.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999999888877766643 35788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++...|++||+
T Consensus        82 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (247)
T 3lyl_A           82 AIDILVNNAGITRD--NLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKA  159 (247)
T ss_dssp             CCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHH
Confidence            99999999999865  7788999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+++|+++++.|++++||+|++|+||+++|++.....+.          ....... ..+.+++.+|+|+|+++++|+++
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~dva~~i~~l~s~  228 (247)
T 3lyl_A          160 GVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDE----------QKSFIAT-KIPSGQIGEPKDIAAAVAFLASE  228 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHH----------HHHHHHT-TSTTCCCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHH----------HHHHHhh-cCCCCCCcCHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999997664321          1111222 23348999999999999999999


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+++.+|||+.+
T Consensus       229 ~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          229 EAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             GGTTCCSCEEEESTTSSC
T ss_pred             CcCCccCCEEEECCCEec
Confidence            899999999999999875

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=6.8e-48  Score=326.72  Aligned_cols=239  Identities=23%  Similarity=0.350  Sum_probs=211.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCC--CCHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDV--TKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~--~~~~~~~~~~~~~   88 (280)
                      ...+++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..  ...+.++.+|+  ++++++.++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence            3468999999999999999999999999999999999999888777666532  23677889999  9999999999999


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .+.++++|+||||||+.... .++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++...|
T Consensus        87 ~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  165 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDV-CPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAY  165 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCC-SCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhCCCCCEEEECCccCCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchh
Confidence            99999999999999986432 67889999999999999999999999999999988888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+++|+++++.|+++. |+||+|+||+++|++.....+...                   ..++.+|+|+|++++
T Consensus       166 ~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~~~-------------------~~~~~~p~dva~~~~  225 (252)
T 3f1l_A          166 AASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTED-------------------PQKLKTPADIMPLYL  225 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTTCC-------------------GGGSBCTGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCccc-------------------hhccCCHHHHHHHHH
Confidence            999999999999999999987 999999999999998655433211                   034678999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCcccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ||+++...++||++|.+|||+...
T Consensus       226 ~L~s~~~~~itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          226 WLMGDDSRRKTGMTFDAQPGRKPG  249 (252)
T ss_dssp             HHHSGGGTTCCSCEEESSCC----
T ss_pred             HHcCccccCCCCCEEEeCCCcCCC
Confidence            999999999999999999998643

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=7.7e-48  Score=329.09  Aligned_cols=254  Identities=23%  Similarity=0.331  Sum_probs=215.1

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .|.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..   ...+.++.+|+++++++.+++  
T Consensus         3 ~m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~--   80 (267)
T 3t4x_A            3 AMHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI--   80 (267)
T ss_dssp             CCCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHH--
T ss_pred             ccccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHH--
Confidence            355679999999999999999999999999999999999999887776666532   346778899999999987665  


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~  167 (280)
                        ++++++|++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...
T Consensus        81 --~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  156 (267)
T 3t4x_A           81 --EKYPKVDILINNLGIFEP--VEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAH  156 (267)
T ss_dssp             --HHCCCCSEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHH
T ss_pred             --HhcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchH
Confidence              467999999999999865  7888999999999999999999999999999998888899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCC----cchhhhhhhhhhHHHHhhh--ccCCCCCCCHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP----EEERTEDAMVGFRNFVARN--ANMQGTELTAN  241 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  241 (280)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++......    .......  +....+....  ..+.+++++|+
T Consensus       157 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~r~~~pe  234 (267)
T 3t4x_A          157 YSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIE--EAEKRFMKENRPTSIIQRLIRPE  234 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHH--HHHHHHHHHHCTTCSSCSCBCTH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHH--HHHHHHhhccCCcccccCccCHH
Confidence            99999999999999999999999999999999999997654211    1100000  1112222222  22458999999


Q ss_pred             HHHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          242 DVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       242 dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+|++++||+++.+.++||++|.+|||+...
T Consensus       235 dvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          235 EIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            9999999999998999999999999998653

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=7.3e-48  Score=336.97  Aligned_cols=255  Identities=31%  Similarity=0.467  Sum_probs=213.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------cchHHHHHHHhC-CCCCeEEEecCCCCHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ------------DNLGQQVCQSLG-GEPDTFFCHCDVTKEE   79 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~-~~~~~~~~~~D~~~~~   79 (280)
                      +.+++||++|||||++|||+++|+.|+++|++|++++|+            .+.+++..+.+. ...++.++.+|+++++
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA  120 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            456899999999999999999999999999999999876            444555444443 2357889999999999


Q ss_pred             HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccc
Q 023553           80 DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAG  158 (280)
Q Consensus        80 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~  158 (280)
                      +++++++++.+.+|++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++ .|+||++||..+
T Consensus       121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~  198 (317)
T 3oec_A          121 SLQAVVDEALAEFGHIDILVSNVGISNQ--GEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVG  198 (317)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHh
Confidence            9999999999999999999999999865  7888999999999999999999999999999998765 689999999999


Q ss_pred             cccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCC------CcchhhhhhhhhhHHHHhhhcc
Q 023553          159 AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHL------PEEERTEDAMVGFRNFVARNAN  232 (280)
Q Consensus       159 ~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  232 (280)
                      ..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....      +......  .............
T Consensus       199 ~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  276 (317)
T 3oec_A          199 LRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPT--REDAAELFSQLTL  276 (317)
T ss_dssp             SSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCC--HHHHHHHHTTTCS
T ss_pred             cCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccc--hhHHHHHHhhhcc
Confidence            9999999999999999999999999999999999999999999999864310      0000000  0001111111111


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       233 ~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ..+++++|+|+|++++||+++.+.++||++|.+|||+..
T Consensus       277 ~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          277 LPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             SSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence            127889999999999999999999999999999999864

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.1e-47  Score=326.65  Aligned_cols=248  Identities=30%  Similarity=0.422  Sum_probs=204.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++++||++|||||++|||+++|++|+++|++|+++ .++.+..++..+++.. ..++.++.||++++++++++++++.+
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999998 5556666666555543 35788899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccch
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYT  169 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-~~~~~~~~Y~  169 (280)
                      ++|++|++|||||+.... .++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..+. .+.++...|+
T Consensus        83 ~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~  159 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIAR-KTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYA  159 (259)
T ss_dssp             HHCSEEEEEECCCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHH
T ss_pred             HhCCCCEEEECCCccCCC-CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHH
Confidence            999999999999987332 78899999999999999999999999999999965  6899999999998 6788899999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|+++++.|+++. |+||+|+||+++|++.......+         ....... ..+.+++.+|+|+|++++|
T Consensus       160 asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~---------~~~~~~~-~~p~~r~~~pedva~~v~~  228 (259)
T 3edm_A          160 TSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPE---------VRERVAG-ATSLKREGSSEDVAGLVAF  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC--------------------------------CCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChH---------HHHHHHh-cCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999887 99999999999999976543211         1111112 2234889999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccccC
Q 023553          250 LASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      |+++...++||++|.+|||+....+
T Consensus       229 L~s~~~~~itG~~i~vdGg~~~~~~  253 (259)
T 3edm_A          229 LASDDAAYVTGACYDINGGVLFSEG  253 (259)
T ss_dssp             HHSGGGTTCCSCEEEESBCSSBC--
T ss_pred             HcCccccCccCCEEEECCCcCCCCC
Confidence            9999999999999999999887654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=8.4e-48  Score=329.18  Aligned_cols=251  Identities=33%  Similarity=0.460  Sum_probs=212.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..++++|++|||||++|||+++|+.|+++|++|++++|+.+..         ......+.+|+++++++.++++++.+.+
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------VNVSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------TTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------cCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            3568999999999999999999999999999999999987653         1246678999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus        80 g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  157 (269)
T 3vtz_A           80 GRIDILVNNAGIEQY--SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSK  157 (269)
T ss_dssp             SCCCEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHH
Confidence            999999999998765  788899999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh-hhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER-TEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      +|+++|+++++.|+++ ||+||+|+||+++|++.......... .............. ..+.+++.+|+|+|++++||+
T Consensus       158 aa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~pedvA~~v~~L~  235 (269)
T 3vtz_A          158 HALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR-QHPMGRIGRPEEVAEVVAFLA  235 (269)
T ss_dssp             HHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH-HSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh-cCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999998 89999999999999986543211000 00000111111122 234589999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcccccCcc
Q 023553          252 SDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      ++.+.++||++|.+|||+....+.+
T Consensus       236 s~~~~~itG~~i~vdGG~~~~~~~~  260 (269)
T 3vtz_A          236 SDRSSFITGACLTVDGGLLSKLPIS  260 (269)
T ss_dssp             SGGGTTCCSCEEEESTTGGGBCCCC
T ss_pred             CCccCCCcCcEEEECCCccccCCCC
Confidence            9989999999999999998776543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-47  Score=326.06  Aligned_cols=241  Identities=30%  Similarity=0.451  Sum_probs=210.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++||++|||||++|||+++|+.|+++|++|++++++. +..++..+++.. ..++.++.+|++|+++++++++++.++
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999997664 555555555532 357889999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-CCCCccchh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-GLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-~~~~~~Y~~  170 (280)
                      +|++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+ .++...|++
T Consensus       107 ~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~a  182 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHS--APLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSA  182 (271)
T ss_dssp             HSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHH
T ss_pred             cCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHH
Confidence            9999999999999865  78999999999999999999999999999999954  689999999877665 688999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.......           ...... ..+.+++.+|+|+|++++||
T Consensus       183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-----------~~~~~~-~~~~~r~~~pedvA~~v~fL  250 (271)
T 3v2g_A          183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDH-----------AEAQRE-RIATGSYGEPQDIAGLVAWL  250 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSS-----------HHHHHH-TCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchh-----------HHHHHh-cCCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999987543211           111112 23448999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcc
Q 023553          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++...++||++|.+|||+.
T Consensus       251 ~s~~~~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          251 AGPQGKFVTGASLTIDGGAN  270 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTTT
T ss_pred             hCcccCCccCCEEEeCcCcc
Confidence            99999999999999999975

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2.8e-47  Score=327.94  Aligned_cols=255  Identities=28%  Similarity=0.392  Sum_probs=211.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+...  .++.++.+|+++++++.++++++.+++++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG--GNAVGVVGDVRSLQDQKRAAERCLAAFGK   79 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTB--TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999999999988887776653  57888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCC----CCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           95 LDIMVNNAGISGAPCPDI----READLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +|+||||||+.... ..+    .+.+.++|++++++|+.++++++++++|.|+++ .|+||++||..+..+.++...|++
T Consensus        80 iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  157 (281)
T 3zv4_A           80 IDTLIPNAGIWDYS-TALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTA  157 (281)
T ss_dssp             CCEEECCCCCCCTT-CCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSSSSSCHHHHH
T ss_pred             CCEEEECCCcCccc-cccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhccCCCCCchhHH
Confidence            99999999986432 222    244567899999999999999999999999765 499999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|+++. |+||+|+||+++|++......................... .+.+++.+|+|+|++++||
T Consensus       158 sKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~pedvA~~v~fL  235 (281)
T 3zv4_A          158 TKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSV-LPIGRMPALEEYTGAYVFF  235 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHT-CTTSSCCCGGGGSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhc-CCCCCCCCHHHHHHHHHHh
Confidence            9999999999999999987 9999999999999987543221100000000112222233 3459999999999999999


Q ss_pred             cC-CCCCceeecEEEeCCCcccccCc
Q 023553          251 AS-DEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       251 ~s-~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      ++ +.+.++||++|.+|||+...+..
T Consensus       236 ~s~~~~~~itG~~i~vdGG~~~~~~~  261 (281)
T 3zv4_A          236 ATRGDSLPATGALLNYDGGMGVRGFL  261 (281)
T ss_dssp             HSTTTSTTCSSCEEEESSSGGGCCSS
T ss_pred             hcccccccccCcEEEECCCCccccch
Confidence            99 78889999999999999876543

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=4.2e-48  Score=329.83  Aligned_cols=246  Identities=25%  Similarity=0.373  Sum_probs=206.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC---cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~---~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++++++|++|||||++|||+++|+.|+++|++|++++|+   .+.+++..+++.. ..++.++.||++|+++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998765   3455555555543 357889999999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .++++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|.  +.|+||++||..+..+.++...|
T Consensus        86 ~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~~g~iv~isS~~~~~~~~~~~~Y  161 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLK--KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITIATSLLAAYTGFYSTY  161 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCS--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEECCCHHHHHHCCCCC-
T ss_pred             HHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--CCCEEEEEechhhccCCCCCchh
Confidence            9999999999999999866  7889999999999999999999999999999993  46899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.......+.         ..... ...+.+++.+|+|+|++++
T Consensus       162 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~---------~~~~~-~~~~~~r~~~pedvA~~v~  231 (262)
T 3ksu_A          162 AGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKES---------TAFHK-SQAMGNQLTKIEDIAPIIK  231 (262)
T ss_dssp             ----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------------------CCCCSCCGGGTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHH---------HHHHH-hcCcccCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999765432211         11111 2234489999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCccccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ||+++ ..++||++|.+|||+....
T Consensus       232 ~L~s~-~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          232 FLTTD-GWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             HHHTT-TTTCCSCEEEESTTCCCC-
T ss_pred             HHcCC-CCCccCCEEEECCCccCCC
Confidence            99998 8899999999999987543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-47  Score=325.29  Aligned_cols=247  Identities=26%  Similarity=0.387  Sum_probs=213.4

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ...++++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+.+.. ..++.++.+|+++.++++++++++.
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVK   86 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999988 555555555444432 3578899999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      ++++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.++...|+
T Consensus        87 ~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  164 (256)
T 3ezl_A           87 AEVGEIDVLVNNAGITRD--VVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYS  164 (256)
T ss_dssp             HHTCCEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHH
T ss_pred             HhcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccH
Confidence            999999999999999865  788899999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|+++++.|++++||+|++|+||+++|++.....+..          ....... .+.+++.+|+|+|+++++
T Consensus       165 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----------~~~~~~~-~~~~~~~~~~dva~~~~~  233 (256)
T 3ezl_A          165 TAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDV----------LEKIVAT-IPVRRLGSPDEIGSIVAW  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHH----------HHHHHHH-STTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHH----------HHHHHhc-CCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999987653221          1111222 234889999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |++++..+++|+++.+|||+..
T Consensus       234 l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          234 LASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHSGGGTTCCSCEEEESTTSCC
T ss_pred             HhCCcccCCcCcEEEECCCEeC
Confidence            9999889999999999999875

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=5.6e-48  Score=331.73  Aligned_cols=253  Identities=33%  Similarity=0.435  Sum_probs=206.0

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------cchHHHHHHHhCC-CCCeEEEecCCCCH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ------------DNLGQQVCQSLGG-EPDTFFCHCDVTKE   78 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~-~~~~~~~~~D~~~~   78 (280)
                      ...+++||++|||||++|||+++|+.|+++|++|++++|+            .+.+++..+.+.. ..++.++.||++|+
T Consensus         7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   86 (278)
T 3sx2_A            7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR   86 (278)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            3457899999999999999999999999999999999987            4455554444432 35788999999999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEcccc
Q 023553           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVA  157 (280)
Q Consensus        79 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~  157 (280)
                      +++.++++++.+.++++|+||||||+...  .    .+.++|++++++|+.++++++++++|.|++++ .|+||++||.+
T Consensus        87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  160 (278)
T 3sx2_A           87 ESLSAALQAGLDELGRLDIVVANAGIAPM--S----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSA  160 (278)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCC--S----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCC--C----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHH
Confidence            99999999999999999999999998643  2    25899999999999999999999999997764 68999999999


Q ss_pred             ccccC----CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccC
Q 023553          158 GAIGG----LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM  233 (280)
Q Consensus       158 ~~~~~----~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (280)
                      +..+.    ++...|++||+|+++|+++++.|++++||+||+|+||+++|++...........................+
T Consensus       161 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  240 (278)
T 3sx2_A          161 GLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP  240 (278)
T ss_dssp             GTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS
T ss_pred             hcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC
Confidence            98876    67788999999999999999999999999999999999999987543211100000000000000111223


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       234 ~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                       +++.+|+|+|++++||+++..+++||++|.+|||+..
T Consensus       241 -~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          241 -VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             -CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             -cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence             6889999999999999999899999999999999863

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-47  Score=324.87  Aligned_cols=250  Identities=32%  Similarity=0.474  Sum_probs=214.6

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh-C-CCCCeEEEecCCCCHHHHHHHHHH
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL-G-GEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~-~-~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      ++...++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++ . ...++.++.||+++++++.+++++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   92 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEA   92 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            44456789999999999999999999999999999999999988777666554 1 124678889999999999999999


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc-ccccCCCCc
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA-GAIGGLGPH  166 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~-~~~~~~~~~  166 (280)
                      +.+.++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.. +..+.++..
T Consensus        93 ~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  170 (267)
T 1vl8_A           93 VKEKFGKLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNIS  170 (267)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCH
T ss_pred             HHHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCCh
Confidence            99999999999999998765  678899999999999999999999999999999887789999999999 888888899


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+++++|+++++.|++++||+|++|+||+++|++........       .....+ ... .+.+++++|+|+|++
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-------~~~~~~-~~~-~p~~~~~~p~dvA~~  241 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDP-------EKLDYM-LKR-IPLGRTGVPEDLKGV  241 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCH-------HHHHHH-HHT-CTTSSCBCGGGGHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccCh-------HHHHHH-Hhh-CCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999999999999865321100       001111 122 234889999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCcc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++|+++...+++|+++.+|||+.
T Consensus       242 v~~l~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          242 AVFLASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHcCccccCCcCCeEEECCCCC
Confidence            999999888899999999999975

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=7.7e-47  Score=323.89  Aligned_cols=253  Identities=25%  Similarity=0.368  Sum_probs=212.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.. ..++.++.+|+++++++.++++++.+.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            468899999999999999999999999999999999998877776665532 3468889999999999999999999999


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           93 -GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       +++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus        97 ~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  174 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS  174 (273)
T ss_dssp             TSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHH
Confidence             999999999998755  77889999999999999999999999999999987778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++|++.++.|++++||+||+|+||+++|++............   .....+ ... .+.+++.+|+|+|+++++|+
T Consensus       175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~-~~~-~p~~r~~~p~dvA~~v~~l~  249 (273)
T 1ae1_A          175 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQK---EEIDNF-IVK-TPMGRAGKPQEVSALIAFLC  249 (273)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CH---HHHHHH-HHH-STTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcH---HHHHHH-Hhc-CCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999998654322100000   001111 122 33488999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccccc
Q 023553          252 SDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ++...+++|+++.+|||+...+
T Consensus       250 s~~~~~~tG~~i~vdGG~~~~~  271 (273)
T 1ae1_A          250 FPAASYITGQIIWADGGFTANG  271 (273)
T ss_dssp             SGGGTTCCSCEEEESTTGGGCS
T ss_pred             CccccCcCCCEEEECCCcccCC
Confidence            9888899999999999987643

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=6.6e-47  Score=327.15  Aligned_cols=247  Identities=26%  Similarity=0.382  Sum_probs=213.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-HHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..+++||++|||||++|||+++|+.|+++|++|++++|+.+.. +...+.+. ...++.++.+|++|+++++++++++.+
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999999987643 33333333 235788999999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +++++|+||||||+.... .++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.++...|++
T Consensus       122 ~~g~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  198 (291)
T 3ijr_A          122 QLGSLNILVNNVAQQYPQ-QGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSA  198 (291)
T ss_dssp             HHSSCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHH
Confidence            999999999999987542 67888999999999999999999999999999954  589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.......+.        . .... ...+.+++.+|+|+|++++||
T Consensus       199 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~--------~-~~~~-~~~p~~r~~~p~dvA~~v~~L  268 (291)
T 3ijr_A          199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKK--------V-SQFG-SNVPMQRPGQPYELAPAYVYL  268 (291)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHH--------H-HHTT-TTSTTSSCBCGGGTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHH--------H-HHHH-ccCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998654332211        1 1111 223458999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...++||++|.+|||+...
T Consensus       269 ~s~~~~~itG~~i~vdGG~~~~  290 (291)
T 3ijr_A          269 ASSDSSYVTGQMIHVNGGVIVN  290 (291)
T ss_dssp             HSGGGTTCCSCEEEESSSCCCC
T ss_pred             hCCccCCCcCCEEEECCCcccC
Confidence            9999999999999999998754

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=5.8e-47  Score=327.97  Aligned_cols=246  Identities=26%  Similarity=0.360  Sum_probs=210.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc--hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN--LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+.+  ..++..+.+.. ..++.++.||++++++++++++++.+
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999998733  34444333322 35788899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||+.... .++.+.+.++|++.+++|+.++++++++++|.|.+  .|+||++||..+..+.++...|++
T Consensus       125 ~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~a  201 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAI-PEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAA  201 (294)
T ss_dssp             HHTCCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHHH
Confidence            999999999999986532 67889999999999999999999999999999954  589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++...........       .. .. ...+.+++.+|+|+|++++||
T Consensus       202 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~-------~~-~~-~~~p~~r~~~p~dvA~~v~~L  272 (294)
T 3r3s_A          202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKI-------PQ-FG-QQTPMKRAGQPAELAPVYVYL  272 (294)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGS-------TT-TT-TTSTTSSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHH-------HH-HH-hcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999854322211111       01 11 123448999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCccc
Q 023553          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...++||++|.+|||++.
T Consensus       273 ~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          273 ASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HSGGGTTCCSCEEEESTTCCC
T ss_pred             hCccccCCCCCEEEECCCccC
Confidence            999999999999999999875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=5.2e-47  Score=320.11  Aligned_cols=242  Identities=35%  Similarity=0.528  Sum_probs=212.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++|+++||||++|||+++++.|+++|++|++++| +.+.+++..+++.. ..++.++.+|+++++++.++++++.+.++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            67999999999999999999999999999999999 77666666555532 34688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus        82 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  159 (246)
T 2uvd_A           82 QVDILVNNAGVTKD--NLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKA  159 (246)
T ss_dssp             CCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHH
Confidence            99999999998754  6788999999999999999999999999999998777899999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      ++++|++.++.|++++||+|++|+||+++|++.....+.  .       ...+ ... .+.+++.+|+|+|+++++|+++
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~-------~~~~-~~~-~p~~~~~~~~dvA~~~~~l~s~  228 (246)
T 2uvd_A          160 GVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDEN--I-------KAEM-LKL-IPAAQFGEAQDIANAVTFFASD  228 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTT--H-------HHHH-HHT-CTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHH--H-------HHHH-Hhc-CCCCCCcCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999986543211  0       1111 112 2347899999999999999998


Q ss_pred             CCCceeecEEEeCCCcc
Q 023553          254 EARYISGTNLMVDGGFT  270 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++|+++.+|||+.
T Consensus       229 ~~~~~tG~~~~vdgG~~  245 (246)
T 2uvd_A          229 QSKYITGQTLNVDGGMV  245 (246)
T ss_dssp             GGTTCCSCEEEESTTSC
T ss_pred             hhcCCCCCEEEECcCcc
Confidence            88899999999999975

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=6.7e-47  Score=324.74  Aligned_cols=247  Identities=27%  Similarity=0.327  Sum_probs=215.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++...+++.++.+|++++++++++++++.+.+
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELS  103 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            34689999999999999999999999999999999999998888777777544478888999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCC----ceEEEEccccccccCCCCc-c
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK----GTIISICSVAGAIGGLGPH-A  167 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----g~iv~isS~~~~~~~~~~~-~  167 (280)
                      +++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++.    ++||++||..+..+.++.. .
T Consensus       104 g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~  181 (276)
T 2b4q_A          104 ARLDILVNNAGTSWG--AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYA  181 (276)
T ss_dssp             SCCSEEEECCCCCCC--CCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTT
T ss_pred             CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccc
Confidence            999999999998765  77889999999999999999999999999999976655    8999999999998888888 9


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |++||+|++.|++.++.|++++||+||+|+||+++|++.......  .       ...+......+.+++.+|+|+|+++
T Consensus       182 Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~-------~~~~~~~~~~p~~r~~~p~dvA~~v  252 (276)
T 2b4q_A          182 YGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND--P-------QALEADSASIPMGRWGRPEEMAALA  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC--H-------HHHHHHHHTSTTSSCCCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh--H-------HHHHHhhcCCCCCCcCCHHHHHHHH
Confidence            999999999999999999999999999999999999985432110  0       0111110123448899999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCcc
Q 023553          248 LFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+++...+++|+++.+|||+.
T Consensus       253 ~~l~s~~~~~~tG~~i~vdGG~~  275 (276)
T 2b4q_A          253 ISLAGTAGAYMTGNVIPIDGGFH  275 (276)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhCccccCCCCCEEEeCCCcc
Confidence            99999888899999999999975

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=3e-47  Score=326.08  Aligned_cols=247  Identities=27%  Similarity=0.398  Sum_probs=211.2

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+. +..+...+.+.. ..++.++.+|+++++++.++++++.
T Consensus        23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~  102 (271)
T 4iin_A           23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIV  102 (271)
T ss_dssp             -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999954 444444444432 3578899999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++...|+
T Consensus       103 ~~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  180 (271)
T 4iin_A          103 QSDGGLSYLVNNAGVVRD--KLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYS  180 (271)
T ss_dssp             HHHSSCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HhcCCCCEEEECCCcCCC--cccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhH
Confidence            999999999999999866  778899999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|++.|++.++.|++++||+|++|+||+++|++.....+...          ..... ..+.+++.+|+|+|+++++
T Consensus       181 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~----------~~~~~-~~~~~~~~~p~dvA~~i~~  249 (271)
T 4iin_A          181 ASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELK----------ADYVK-NIPLNRLGSAKEVAEAVAF  249 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------------CGG-GCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHH----------HHHHh-cCCcCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999999765432211          11111 2234889999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCccc
Q 023553          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...+++|+++.+|||+.+
T Consensus       250 l~s~~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          250 LLSDHSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             HHSGGGTTCCSCEEEESTTSCC
T ss_pred             HhCCCcCCCcCCEEEeCCCeeC
Confidence            9998889999999999999864

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=4.4e-47  Score=324.69  Aligned_cols=245  Identities=27%  Similarity=0.402  Sum_probs=211.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++|++|||||++|||+++|++|+++|++|++++ ++.+..++..+.+. ...++.++.||++|.++++++++++.+.+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            37899999999999999999999999999999998 45555555444443 34578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++...|++||
T Consensus       102 g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  179 (269)
T 3gk3_A          102 GKVDVLINNAGITRD--ATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAK  179 (269)
T ss_dssp             SCCSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCcCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHH
Confidence            999999999999865  778899999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+++|+++++.|++++||+|++|+||+++|++.....+....         .. .....+.+++.+|+|+|+++++|++
T Consensus       180 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~---------~~-~~~~~~~~~~~~p~dvA~~v~~L~s  249 (269)
T 3gk3_A          180 AGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLE---------AK-ILPQIPVGRLGRPDEVAALIAFLCS  249 (269)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC----------------CC-SGGGCTTSSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHH---------HH-hhhcCCcCCccCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999997654322110         00 1112334889999999999999999


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...++||++|.+|||+..
T Consensus       250 ~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          250 DDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             TTCTTCCSCEEEESTTSCC
T ss_pred             CCcCCeeCcEEEECCCEeC
Confidence            9999999999999999875

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-46  Score=316.63  Aligned_cols=239  Identities=33%  Similarity=0.496  Sum_probs=211.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+.    +.++.+|++++++++++++++.+++++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG----AHPVVMDVADPASVERGFAEALAHLGR   77 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT----CEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999999887777665442    678899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||.. ..+.++...|++||++
T Consensus        78 id~lvn~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a  154 (245)
T 1uls_A           78 LDGVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAG  154 (245)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHH
Confidence            9999999998755  778899999999999999999999999999999887789999999999 8888889999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++|+++++.|++++||+||+|+||+++|++.... +.. .       ...+ ... .+.+++.+|+|+|+++++|+++.
T Consensus       155 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~-~-------~~~~-~~~-~p~~~~~~~~dvA~~v~~l~s~~  223 (245)
T 1uls_A          155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-PEK-V-------REKA-IAA-TPLGRAGKPLEVAYAALFLLSDE  223 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-CHH-H-------HHHH-HHT-CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-CHH-H-------HHHH-Hhh-CCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999986542 110 0       1111 122 23488999999999999999988


Q ss_pred             CCceeecEEEeCCCccc
Q 023553          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ..+++|+++.+|||+..
T Consensus       224 ~~~~tG~~~~vdgG~~~  240 (245)
T 1uls_A          224 SSFITGQVLFVDGGRTI  240 (245)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             hcCCcCCEEEECCCccc
Confidence            88999999999999864

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.2e-46  Score=318.53  Aligned_cols=243  Identities=33%  Similarity=0.449  Sum_probs=205.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||+++++.|+++|++|++++|+. +.+++..+..  ..++.++.+|+++++++.++++++.+++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999998 6655433332  2468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus        81 g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  158 (249)
T 2ew8_A           81 GRCDILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTK  158 (249)
T ss_dssp             SCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHH
Confidence            999999999998755  678899999999999999999999999999999877789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccc-cCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLAL-AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      ++++.|+++++.|++++||+||+|+||+++|++.. .......   .   ....+   . .+.+++.+|+|+|+++++|+
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~---~~~~~---~-~~~~~~~~p~dva~~~~~l~  228 (249)
T 2ew8_A          159 AANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMF---D---VLPNM---L-QAIPRLQVPLDLTGAAAFLA  228 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------------CT---T-SSSCSCCCTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchh---h---HHHHh---h-CccCCCCCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999865 2210000   0   00111   0 23488999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcc
Q 023553          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++...+++|+++.+|||+.
T Consensus       229 s~~~~~~tG~~~~vdGG~~  247 (249)
T 2ew8_A          229 SDDASFITGQTLAVDGGMV  247 (249)
T ss_dssp             SGGGTTCCSCEEEESSSCC
T ss_pred             CcccCCCCCcEEEECCCcc
Confidence            9888899999999999975

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=5.7e-47  Score=322.79  Aligned_cols=251  Identities=30%  Similarity=0.461  Sum_probs=214.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.. ..++.++.||+++++++.++++++.+.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999998887777666643 3468889999999999999999999999


Q ss_pred             CCccEEEECCCCC-CCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           93 GTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|+||||||+. ..  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus        83 g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  160 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAF--APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTS  160 (262)
T ss_dssp             SCCCEEEECCCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHH
T ss_pred             CCCCEEEECCCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHH
Confidence            9999999999986 33  67888999999999999999999999999999987778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcc-------hhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE-------ERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      |+|+++|++.++.|++++||+||+|+||+++|++........       ...... .......... .+.+++.+|+|+|
T Consensus       161 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~p~~r~~~p~dvA  238 (262)
T 1zem_A          161 KGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDP-KVVAQQMIGS-VPMRRYGDINEIP  238 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSH-HHHHHHHHHT-STTSSCBCGGGSH
T ss_pred             HHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCH-HHHHHHHHhc-CCCCCCcCHHHHH
Confidence            999999999999999999999999999999999865420000       000000 0011111122 3448999999999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCC
Q 023553          245 NAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      ++++||+++...++||+++.+|||
T Consensus       239 ~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          239 GVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHcCchhcCcCCcEEecCCC
Confidence            999999998889999999999998

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=8.6e-47  Score=321.33  Aligned_cols=252  Identities=31%  Similarity=0.462  Sum_probs=208.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-HHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++|++|||||++|||+++++.|+++|++|++++|+.+. +++..+++..  ..++.++.+|+++++++.++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            679999999999999999999999999999999999877 6666555532  2467889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus        82 g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  159 (260)
T 1x1t_A           82 GRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHH
Confidence            999999999998755  678899999999999999999999999999999877789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh--hhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +++++|++.++.|++++||+||+|+||+++|++.....+....  ..........+.... .+.+++.+|+|+|+++++|
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~p~dva~~~~~l  238 (260)
T 1x1t_A          160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK-QPSLQFVTPEQLGGTAVFL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHH-CTTCCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhcc-CCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999987643221000  000000011110112 2348999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcc
Q 023553          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++...+++|+++.+|||+.
T Consensus       239 ~s~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          239 ASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HSGGGTTCCSCEEEESTTGG
T ss_pred             hChhhcCCCCCEEEECCCcc
Confidence            99888899999999999975

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.5e-46  Score=320.28  Aligned_cols=256  Identities=27%  Similarity=0.317  Sum_probs=216.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .+++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++..  ..++.++.+|+++++++.++++++.+
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3568899999999999999999999999999999999998877766555532  24688899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++
T Consensus        82 ~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  159 (263)
T 3ai3_A           82 SFGGADILVNNAGTGSN--ETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNV  159 (263)
T ss_dssp             HHSSCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHH
Confidence            99999999999998765  7788999999999999999999999999999998777899999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcch--hhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE--RTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ||+|++.|++.++.|++++||+|++|+||+++|++.....+...  ...........+ .....+.+++.+|+|+|++++
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~dvA~~~~  238 (263)
T 3ai3_A          160 TKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSV-ADEHAPIKRFASPEELANFFV  238 (263)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHH-HHHHCTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHH-HhcCCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999998653211000  000000001111 111024488999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+++...+++|+++.+|||+..
T Consensus       239 ~l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          239 FLCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             HHTSTTCTTCCSCEEEESTTCCC
T ss_pred             HHcCccccCCCCcEEEECCCccc
Confidence            99998888999999999999764

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=1.2e-46  Score=321.52  Aligned_cols=257  Identities=25%  Similarity=0.415  Sum_probs=218.5

Q ss_pred             CCCCCCCCC--cccccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchH-HHHHHHhCC--CCCeEEEec
Q 023553            1 MSNSNSTDS--SPAVQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGG--EPDTFFCHC   73 (280)
Q Consensus         1 ~~~~~~~~~--~~~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~--~~~~~~~~~   73 (280)
                      |++......  .+.++++++|++|||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++..  ..++.++.|
T Consensus         1 m~~~~~~~~~~~~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~   80 (267)
T 3gdg_A            1 MPGQQATKHESLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKC   80 (267)
T ss_dssp             CCCCCCCSCSSHHHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBC
T ss_pred             CCcccCCCCcccccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEec
Confidence            555554433  233567999999999999  9999999999999999999999886544 444444321  357888999


Q ss_pred             CCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEE
Q 023553           74 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISI  153 (280)
Q Consensus        74 D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~i  153 (280)
                      |++++++++++++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++
T Consensus        81 Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~i  158 (267)
T 3gdg_A           81 QVDSYESCEKLVKDVVADFGQIDAFIANAGATAD--SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVIT  158 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCC--SCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEE
Confidence            9999999999999999999999999999999866  77889999999999999999999999999999988888999999


Q ss_pred             ccccccccC--CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc
Q 023553          154 CSVAGAIGG--LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA  231 (280)
Q Consensus       154 sS~~~~~~~--~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (280)
                      ||..+..+.  ++...|++||+|+++|++.++.|+++. |+||+|+||+++|++.....+.          ....... .
T Consensus       159 sS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~-~  226 (267)
T 3gdg_A          159 ASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKE----------TQQLWHS-M  226 (267)
T ss_dssp             CCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHH----------HHHHHHT-T
T ss_pred             ccccccccCCCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHH----------HHHHHHh-c
Confidence            999998876  577899999999999999999999887 9999999999999997654221          1111122 2


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       232 ~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .+.+++.+|+|+|+++++|+++...++||++|.+|||+..
T Consensus       227 ~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          227 IPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             STTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             CCCCCCcCHHHHHhHhheeecCccccccCCEEEECCceec
Confidence            3458999999999999999999999999999999999864

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-46  Score=321.77  Aligned_cols=252  Identities=33%  Similarity=0.519  Sum_probs=214.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..   ..++.++.||+++++++.++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998877766555421   35788899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +++++|+||||||+.... .++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++
T Consensus        89 ~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  167 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAA  167 (267)
T ss_dssp             HHSCCSEEEECCCCCCCC-BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHH
T ss_pred             HcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHH
Confidence            999999999999986431 4678899999999999999999999999999998777899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccC--CCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAH--LPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ||+|+++|++.++.|++++||+||+|+||+++|++....  ........   .....+ ... .+.+++.+|+|+|++++
T Consensus       168 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---~~~~~~-~~~-~p~~r~~~~~dvA~~v~  242 (267)
T 1iy8_A          168 AKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPR---KAAEEF-IQV-NPSKRYGEAPEIAAVVA  242 (267)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHH---HHHHHH-HTT-CTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhh---hHHHHH-hcc-CCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999986532  00000000   000011 122 23488999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+++...+++|+++.+|||+..
T Consensus       243 ~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          243 FLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             HHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHcCccccCCCCCEEEECCCccc
Confidence            99998888999999999999764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.1e-47  Score=329.35  Aligned_cols=242  Identities=23%  Similarity=0.295  Sum_probs=211.6

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-------hHHHHHHHhCC-CCCeEEEecCCCCHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-------LGQQVCQSLGG-EPDTFFCHCDVTKEEDVC   82 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-------~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~   82 (280)
                      |+.+++++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++.. ..++.++.||++++++++
T Consensus         2 p~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   81 (285)
T 3sc4_A            2 PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVA   81 (285)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            4556789999999999999999999999999999999999976       34444444432 357889999999999999


Q ss_pred             HHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC
Q 023553           83 SAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG  162 (280)
Q Consensus        83 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~  162 (280)
                      ++++++.++++++|++|||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.
T Consensus        82 ~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  159 (285)
T 3sc4_A           82 AAVAKTVEQFGGIDICVNNASAINL--GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK  159 (285)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC
Confidence            9999999999999999999999865  78999999999999999999999999999999988888999999999998886


Q ss_pred             -CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCC-ceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCH
Q 023553          163 -LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPY-AVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       163 -~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                       ++...|++||+|+++|+++++.|++++||+||+|+|| .+.|++.......                  ..+.+++.+|
T Consensus       160 ~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~------------------~~~~~r~~~p  221 (285)
T 3sc4_A          160 WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG------------------DEAMARSRKP  221 (285)
T ss_dssp             GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS------------------CCCCTTCBCT
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc------------------cccccCCCCH
Confidence             7889999999999999999999999999999999999 6899886443211                  1123788999


Q ss_pred             HHHHHHHHHhcCCCCCceeecEEEeCCCccccc
Q 023553          241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       241 ~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      +|+|+++++|+++.. ++||+++.+|||+...+
T Consensus       222 edvA~~~~~l~s~~~-~~tG~~i~~dgg~~~~g  253 (285)
T 3sc4_A          222 EVYADAAYVVLNKPS-SYTGNTLLCEDVLLESG  253 (285)
T ss_dssp             HHHHHHHHHHHTSCT-TCCSCEEEHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCcc-cccceEEEEcCchhccC
Confidence            999999999999888 99999999999987654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=3.4e-47  Score=324.85  Aligned_cols=244  Identities=29%  Similarity=0.386  Sum_probs=209.1

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++++||++|||||++|||+++|+.|+++|++|++++|+.+..+.          ...+.+|+++.+++.++++++.+.
T Consensus        22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~----------~~~~~~Dv~~~~~~~~~~~~~~~~   91 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA----------DLHLPGDLREAAYADGLPGAVAAG   91 (266)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC----------SEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh----------hhccCcCCCCHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999999999998764321          234579999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus        92 ~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  169 (266)
T 3uxy_A           92 LGRLDIVVNNAGVISR--GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLT  169 (266)
T ss_dssp             HSCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHH
Confidence            9999999999999866  78889999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++|+++++.|++++||+||+|+||+++|++.+..........   ........+ ..+.+++.+|+|+|+++++|+
T Consensus       170 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~---~~~~~~~~~-~~p~~r~~~pedvA~~v~~L~  245 (266)
T 3uxy_A          170 KAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDP---DRAVAELGR-TVPLGRIAEPEDIADVVLFLA  245 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCH---HHHHHHHHT-TSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccc---hHHHHHHHh-cCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999998754322111100   001111222 234589999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...++||++|.+|||+..
T Consensus       246 s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          246 SDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             SGGGTTCCSCEEEESTTCCC
T ss_pred             CchhcCCcCCEEEECcCEeC
Confidence            99889999999999999864

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=4.6e-46  Score=317.77  Aligned_cols=255  Identities=22%  Similarity=0.268  Sum_probs=217.4

Q ss_pred             cccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        12 ~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      |++++++|++|||||+  +|||+++|+.|+++|++|++++|+....+...+....  ..++.++.||+++++++++++++
T Consensus         1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            3457899999999999  6799999999999999999999987554444333322  23688999999999999999999


Q ss_pred             HHHHhCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC
Q 023553           88 TVEKFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~  165 (280)
                      +.++++++|++|||||+....  ..++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++.
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  158 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNY  158 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTT
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCc
Confidence            999999999999999987521  267788999999999999999999999999999953  6899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHH
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|++||+|+++|+++++.|++++||+|++|+||+++|++.........        ........ .+.+++.+|+|+|+
T Consensus       159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~p~dva~  229 (266)
T 3oig_A          159 NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNS--------ILKDIEER-APLRRTTTPEEVGD  229 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHH--------HHHHHHHH-STTSSCCCHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHH--------HHHHHHhc-CCCCCCCCHHHHHH
Confidence            9999999999999999999999999999999999999998776533211        11111222 23488999999999


Q ss_pred             HHHHhcCCCCCceeecEEEeCCCcccccCccc
Q 023553          246 AVLFLASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      ++++|+++...+++|++|.+|||+....+.+.
T Consensus       230 ~v~~l~s~~~~~~tG~~i~vdGG~~~~~~~~~  261 (266)
T 3oig_A          230 TAAFLFSDMSRGITGENLHVDSGFHITARLEH  261 (266)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCCCCC-
T ss_pred             HHHHHcCCchhcCcCCEEEECCCeEEeeecCC
Confidence            99999998889999999999999998776653

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.1e-47  Score=324.60  Aligned_cols=244  Identities=29%  Similarity=0.415  Sum_probs=195.8

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      |+++++++|++|||||++|||+++|++|+++|++|++++|+.+...   +.+  ...+.++.+|++++++++++++.+.+
T Consensus         2 p~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (257)
T 3tl3_A            2 PGSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL--GDRARFAAADVTDEAAVASALDLAET   76 (257)
T ss_dssp             --------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT--CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999655433   233  24688899999999999999998877


Q ss_pred             HhCCccEEEECCCCCCCCC--CCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhccc--------CCCceEEEEccccccc
Q 023553           91 KFGTLDIMVNNAGISGAPC--PDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP--------QTKGTIISICSVAGAI  160 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--------~~~g~iv~isS~~~~~  160 (280)
                       ++++|++|||||+.....  .+..+.+.++|++++++|+.++++++++++|.|++        ++.|+||++||..+..
T Consensus        77 -~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tl3_A           77 -MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD  155 (257)
T ss_dssp             -HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred             -hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence             899999999999864310  12235889999999999999999999999999987        5678999999999999


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCH
Q 023553          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....+.          .........++.+++.+|
T Consensus       156 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~~~~r~~~p  225 (257)
T 3tl3_A          156 GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEE----------ARASLGKQVPHPSRLGNP  225 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHH----------HHHHHHHTSSSSCSCBCH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHH----------HHHHHHhcCCCCCCccCH
Confidence            9888999999999999999999999999999999999999999997654221          111112222333899999


Q ss_pred             HHHHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          241 NDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       241 ~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|+|+++++|++.  .++||++|.+|||+.+.
T Consensus       226 ~dva~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          226 DEYGALAVHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHHHHHHC--TTCCSCEEEESTTC---
T ss_pred             HHHHHHHHHHhcC--CCCCCCEEEECCCccCC
Confidence            9999999999975  79999999999998754

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=2e-46  Score=324.21  Aligned_cols=245  Identities=25%  Similarity=0.321  Sum_probs=210.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhC--CCCCeEEEecCCCCHH----------
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLG--GEPDTFFCHCDVTKEE----------   79 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~----------   79 (280)
                      +.++++|++|||||++|||+++|+.|+++|++|++++ |+.+.+++..+++.  ...++.++.+|+++++          
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            4568899999999999999999999999999999999 99887777666653  2357888999999999          


Q ss_pred             -------HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCC--------------HHHHHHHhhhhhhhHHHHHHHH
Q 023553           80 -------DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD--------------LSEFEKVFDINVKGVFHGMKHA  138 (280)
Q Consensus        80 -------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~  138 (280)
                             ++.++++++.+.++++|+||||||+...  .++.+.+              .++|++++++|+.+++.+++++
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  161 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  161 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHH
Confidence                   9999999999999999999999998765  6777888              9999999999999999999999


Q ss_pred             HHhcccCC------CceEEEEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc
Q 023553          139 ARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE  212 (280)
Q Consensus       139 ~~~l~~~~------~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~  212 (280)
                      +|.|++++      .|+||++||..+..+.++...|++||+|+++|++.++.|++++||+||+|+||+++|++ .  .+ 
T Consensus       162 ~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~-  237 (291)
T 1e7w_A          162 AHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--MP-  237 (291)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SC-
T ss_pred             HHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CC-
Confidence            99998776      69999999999999999999999999999999999999999999999999999999998 4  22 


Q ss_pred             chhhhhhhhhhHHHHhhhccCCC-CCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          213 EERTEDAMVGFRNFVARNANMQG-TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +..       ...+ ... .+.+ ++.+|+|+|++++||+++...++||+++.+|||+...
T Consensus       238 ~~~-------~~~~-~~~-~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          238 PAV-------WEGH-RSK-VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             HHH-------HHHH-HTT-CTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHH-------HHHH-Hhh-CCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence            110       1111 122 2336 8999999999999999988899999999999998754

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=2.2e-46  Score=318.81  Aligned_cols=240  Identities=20%  Similarity=0.248  Sum_probs=199.5

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ...++++++|++|||||++|||+++|+.|+++|++|++++|+.+...+..+...    +.++.+|+++++++.++++++.
T Consensus        19 ~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~Dv~~~~~v~~~~~~~~   94 (260)
T 3gem_A           19 FQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG----AVALYGDFSCETGIMAFIDLLK   94 (260)
T ss_dssp             --------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT----CEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC----CeEEECCCCCHHHHHHHHHHHH
Confidence            334577999999999999999999999999999999999999887655554432    6788999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|+||||||+...  .. .+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++...|+
T Consensus        95 ~~~g~iD~lv~nAg~~~~--~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  171 (260)
T 3gem_A           95 TQTSSLRAVVHNASEWLA--ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYC  171 (260)
T ss_dssp             HHCSCCSEEEECCCCCCC--CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHH
T ss_pred             HhcCCCCEEEECCCccCC--CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHH
Confidence            999999999999998765  33 567889999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|+++++.|+++ +|+||+|+||+++|++.....            ....... ..+.+++.+|+|+|++++|
T Consensus       172 asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~~------------~~~~~~~-~~p~~r~~~~edva~~v~~  237 (260)
T 3gem_A          172 ATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDAA------------YRANALA-KSALGIEPGAEVIYQSLRY  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC----------------------------CCSCCCCCTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCHH------------HHHHHHh-cCCCCCCCCHHHHHHHHHH
Confidence            9999999999999999998 699999999999998753211            0011111 2344899999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccc
Q 023553          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+  .+.++||++|.+|||+...
T Consensus       238 L~--~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          238 LL--DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             HH--HCSSCCSCEEEESTTTTTC
T ss_pred             Hh--hCCCCCCCEEEECCCcccC
Confidence            99  4679999999999998764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=5.8e-47  Score=326.60  Aligned_cols=253  Identities=28%  Similarity=0.402  Sum_probs=207.1

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------cchHHHHHHHhC-CCCCeEEEecCCCCH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ------------DNLGQQVCQSLG-GEPDTFFCHCDVTKE   78 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~-~~~~~~~~~~D~~~~   78 (280)
                      .+.+++||++|||||++|||+++|+.|+++|++|++++|+            .+.+++....+. ...++.++.||++++
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            3557999999999999999999999999999999999987            444444444432 235788999999999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        79 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      +++.++++++.+.++++|+||||||+...  .  .+.+.++|++.+++|+.++++++++++|+|  .+.|+||++||..+
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~  157 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPL--G--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVAG  157 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCC--C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCcc--c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccchh
Confidence            99999999999999999999999998754  3  348889999999999999999999999999  45689999999998


Q ss_pred             cccC-----------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh-----hhhhhhh
Q 023553          159 AIGG-----------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER-----TEDAMVG  222 (280)
Q Consensus       159 ~~~~-----------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-----~~~~~~~  222 (280)
                      ..+.           ++...|++||+|+++|+++++.|++++||+||+|+||+++|++..........     .......
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T 3pxx_A          158 LIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA  237 (287)
T ss_dssp             HHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred             cccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHH
Confidence            8765           66789999999999999999999999999999999999999997532100000     0000000


Q ss_pred             hHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          223 FRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ..........+ +++.+|+|+|++++||+|+.+.++||++|.+|||+..
T Consensus       238 ~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          238 LLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             HHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence            11111112223 7899999999999999999999999999999999864

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.1e-47  Score=328.46  Aligned_cols=252  Identities=24%  Similarity=0.345  Sum_probs=218.5

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGA---KVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~---~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~   84 (280)
                      .++.++++|++|||||++|||+++|+.|+++|+   +|++++|+.+.+++..+++..   ..++.++.||++|+++++++
T Consensus        26 ~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~  105 (287)
T 3rku_A           26 KAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPF  105 (287)
T ss_dssp             HHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHH
T ss_pred             cchhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHH
Confidence            345678999999999999999999999999998   999999999888877766632   45788899999999999999


Q ss_pred             HHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC
Q 023553           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        85 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~  164 (280)
                      ++++.+.+|++|+||||||+.... .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.++..+.++
T Consensus       106 ~~~~~~~~g~iD~lVnnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~  184 (287)
T 3rku_A          106 IENLPQEFKDIDILVNNAGKALGS-DRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPT  184 (287)
T ss_dssp             HHTSCGGGCSCCEEEECCCCCCCC-CCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCC
Confidence            999999999999999999987532 6788999999999999999999999999999998888899999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++..........      ........     ....+|+|+|
T Consensus       185 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~------~~~~~~~~-----~~p~~pedvA  253 (287)
T 3rku_A          185 GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEE------QAKNVYKD-----TTPLMADDVA  253 (287)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHH------HHHHHHTT-----SCCEEHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHH------HHHHhhcc-----cCCCCHHHHH
Confidence            999999999999999999999999999999999999999986443221111      01111111     2334899999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCCcccccC
Q 023553          245 NAVLFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      ++++||+++...+++|+++.+|||......
T Consensus       254 ~~v~~l~s~~~~~i~g~~i~v~~g~~~p~~  283 (287)
T 3rku_A          254 DLIVYATSRKQNTVIADTLIFPTNQASPHH  283 (287)
T ss_dssp             HHHHHHHTSCTTEEEEEEEEEETTEEETTE
T ss_pred             HHHHHHhCCCCCeEecceEEeeCCCCCCcc
Confidence            999999999999999999999999876544

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=9.5e-47  Score=321.04  Aligned_cols=253  Identities=21%  Similarity=0.270  Sum_probs=211.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++..   ..++.++.+|+++++++.++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999998877766655531   22688899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +++ +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus        83 ~~g-id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  159 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRP--GRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNI  159 (260)
T ss_dssp             TTC-CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             hcC-CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHH
Confidence            998 9999999998654  6788999999999999999999999999999998777899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhh-HHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      ||++++.|++.++.|++++||+|++|+||+++|++.................. ...... ..+.+++.+|+|+|+++++
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~~~dva~~v~~  238 (260)
T 2z1n_A          160 MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMAS-RIPMGRVGKPEELASVVAF  238 (260)
T ss_dssp             HTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------------------------CCTTSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHh-cCCCCCccCHHHHHHHHHH
Confidence            99999999999999999999999999999999998652211000000000000 011111 2234889999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcc
Q 023553          250 LASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+++...+++|+++.+|||+.
T Consensus       239 l~s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          239 LASEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             HTSGGGTTCCSCEEEESTTTT
T ss_pred             HhCccccCCCCCEEEeCCCcc
Confidence            999888899999999999975

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=2.9e-46  Score=318.09  Aligned_cols=250  Identities=26%  Similarity=0.366  Sum_probs=216.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.. ..++.++.+|+++++++.++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999998877766665532 3467889999999999999999999999


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           93 -GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       +++|++|||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus        85 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  162 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGAT  162 (260)
T ss_dssp             TTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHH
Confidence             899999999998754  67889999999999999999999999999999988778999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+++++|++.++.|++++||+||+|+||+++|++...........    .....+ ... .+.+++++|+|+|+++++|+
T Consensus       163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~----~~~~~~-~~~-~~~~~~~~~~dvA~~v~~l~  236 (260)
T 2ae2_A          163 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQK----ENLNKL-IDR-CALRRMGEPKELAAMVAFLC  236 (260)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHH----HHHHHH-HHT-STTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhH----HHHHHH-Hhc-CCCCCCCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999865432211110    101111 122 33488999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+++.+|||+..
T Consensus       237 s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          237 FPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CccccCCCCCEEEECCCccc
Confidence            98888999999999999764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=6.7e-47  Score=320.25  Aligned_cols=239  Identities=22%  Similarity=0.282  Sum_probs=202.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---C-CCeEEEecCCCCHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---E-PDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      |++++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..   . .++.++.||+++++++.+++++
T Consensus         1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999887777665521   2 5788999999999999999999


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~  167 (280)
                      +.++++++|+||||||+...  .++ +.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.++...
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  157 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFMD--GSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGI  157 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCCC--CCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTH
T ss_pred             HHHhcCCCCEEEECCCcCCC--CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcc
Confidence            99999999999999999765  566 788999999999999999999999999998888899999999999997777999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++........                   +.+++.+|+|+|+++
T Consensus       158 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-------------------~~~~~~~p~dva~~v  218 (250)
T 3nyw_A          158 YGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTPF-------------------KDEEMIQPDDLLNTI  218 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCCS-------------------CGGGSBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCCc-------------------ccccCCCHHHHHHHH
Confidence            9999999999999999999999999999999999999876543211                   115688999999999


Q ss_pred             HHhcCCCCC-ceeecEEEeCCCcccc
Q 023553          248 LFLASDEAR-YISGTNLMVDGGFTSV  272 (280)
Q Consensus       248 ~~l~s~~~~-~~~G~~i~~dgG~~~~  272 (280)
                      ++|+++... +++|..|.+|||....
T Consensus       219 ~~l~s~~~~~~~~~~~i~vd~~~~~~  244 (250)
T 3nyw_A          219 RCLLNLSENVCIKDIVFEMKKSIIEG  244 (250)
T ss_dssp             HHHHTSCTTEECCEEEEEEHHHHHC-
T ss_pred             HHHHcCCCceEeeEEEEEeecccccc
Confidence            999996444 6789999999997653

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=3.2e-46  Score=317.44  Aligned_cols=251  Identities=31%  Similarity=0.472  Sum_probs=212.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch--HHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL--GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~--~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++|++|||||++|||+++|+.|+++|++|++++|+.+.  +++..+.+.. ..++.++.+|+++++++.++++++.+.++
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            37999999999999999999999999999999999877  6666665543 35788899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCC-ceEEEEccccccccCCCCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++. |+||++||..+..+.++...|++||
T Consensus        81 ~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  158 (258)
T 3a28_C           81 GFDVLVNNAGIAQI--KPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTK  158 (258)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHH
Confidence            99999999998755  67889999999999999999999999999999987666 9999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhh--hhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA--MVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +++++|++.++.|++++||+||+|+||+++|++..............  ......+ ... .+.+++.+|+|+|+++++|
T Consensus       159 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~p~~r~~~p~dvA~~v~~l  236 (258)
T 3a28_C          159 FAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEY-SSS-IALGRPSVPEDVAGLVSFL  236 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHH-HTT-CTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHH-Hhc-CCCCCccCHHHHHHHHHHH
Confidence            99999999999999999999999999999999865421000000000  0001111 122 2348899999999999999


Q ss_pred             cCCCCCceeecEEEeCCCccc
Q 023553          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...+++|+++.+|||+..
T Consensus       237 ~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          237 ASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             HSGGGTTCCSCEEEESSSSCC
T ss_pred             hCcccCCCCCCEEEECCCEec
Confidence            998888999999999999753

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-46  Score=319.32  Aligned_cols=251  Identities=27%  Similarity=0.388  Sum_probs=207.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-HHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ++++.+|+++||||++|||+++|++|+++|++|++++|+.+.. +...+.+.. ..++.++.||+++++++.++++++.+
T Consensus         2 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            2 SLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999998876543 333333332 25788999999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccc-cc-cccCCCCccc
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV-AG-AIGGLGPHAY  168 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~-~~-~~~~~~~~~Y  168 (280)
                      .++++|++|||||+......++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||. .+ ..+.++...|
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y  161 (264)
T 3i4f_A           82 HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAF  161 (264)
T ss_dssp             HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHH
T ss_pred             HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchh
Confidence            999999999999953333377889999999999999999999999999999988888999999998 44 5566778899


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+++|+++++.|++++||+|++|+||+++|++.....+.          ...... ...+.+++.+|+|+|++++
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----------~~~~~~-~~~p~~r~~~~~dva~~v~  230 (264)
T 3i4f_A          162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQE----------ARQLKE-HNTPIGRSGTGEDIARTIS  230 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHH----------HHHC---------CCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHH----------HHHHHh-hcCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999987654321          111111 1233489999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCcccccC
Q 023553          249 FLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      +|+++...++||++|.+|||+...-+
T Consensus       231 ~l~s~~~~~itG~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          231 FLCEDDSDMITGTIIEVTGAVDVIHR  256 (264)
T ss_dssp             HHHSGGGTTCCSCEEEESCSCCCCC-
T ss_pred             HHcCcccCCCCCcEEEEcCceeeccC
Confidence            99999889999999999999987644

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=7.3e-47  Score=324.20  Aligned_cols=238  Identities=22%  Similarity=0.276  Sum_probs=205.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-------HHHHHHHhCC-CCCeEEEecCCCCHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-------GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-------~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~   85 (280)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+.+.       +++..+.+.. ..++.++.||+++++++.+++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            57899999999999999999999999999999999998753       3444443322 357888999999999999999


Q ss_pred             HHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc--CC
Q 023553           86 DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--GL  163 (280)
Q Consensus        86 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~--~~  163 (280)
                      +++.+++|++|++|||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+  .+
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  159 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWL--RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWG  159 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC--CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCcccC--CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCC
Confidence            9999999999999999999865  7888999999999999999999999999999998888899999999999887  67


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCC-ceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHH
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPY-AVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      +...|++||+|+++|+++++.|++++||+||+|+|| .++|++.......                    ...++.+|+|
T Consensus       160 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~~--------------------~~~~~~~ped  219 (274)
T 3e03_A          160 AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPGV--------------------DAAACRRPEI  219 (274)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------CC--------------------CGGGSBCTHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcccc--------------------cccccCCHHH
Confidence            788999999999999999999999999999999999 6899987322111                    0134679999


Q ss_pred             HHHHHHHhcCCCCCceeecEEEeCCCcccccC
Q 023553          243 VANAVLFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       243 va~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      +|+++++|+++...++||+++ +|||+....+
T Consensus       220 vA~~v~~l~s~~~~~itG~~i-~~~g~~~~~~  250 (274)
T 3e03_A          220 MADAAHAVLTREAAGFHGQFL-IDDEVLAQAG  250 (274)
T ss_dssp             HHHHHHHHHTSCCTTCCSCEE-EHHHHHHHTT
T ss_pred             HHHHHHHHhCccccccCCeEE-EcCcchhhcc
Confidence            999999999999999999999 8888776544

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=8.6e-47  Score=319.90  Aligned_cols=248  Identities=27%  Similarity=0.412  Sum_probs=183.2

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      |.++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..++.++.||++|+++++++++++.
T Consensus         2 p~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            2 PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999999888877776643 3578889999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCC-CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           90 EKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      +.++++|++|||||+... ...++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+.   ++...|
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y  158 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYY  158 (253)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchh
Confidence            999999999999998532 1256778999999999999999999999999999988888999999999887   456789


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+++|++.++.|++++||+|++|+||+++|++.+...+.+.         .....+. .+.+++.+|+|+|++++
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~dva~~~~  228 (253)
T 3qiv_A          159 GLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEM---------VDDIVKG-LPLSRMGTPDDLVGMCL  228 (253)
T ss_dssp             -CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------------------------------------CCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHH---------HHHHhcc-CCCCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999998765433211         1111112 22378899999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+++...+++|+++.+|||...
T Consensus       229 ~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          229 FLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             HHHSGGGTTCCSCEEEC------
T ss_pred             HHcCccccCCCCCEEEECCCeec
Confidence            99998889999999999999865

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-46  Score=317.65  Aligned_cols=241  Identities=31%  Similarity=0.499  Sum_probs=208.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.  .++.++.+|+++++++.++++++.+.+++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEALEEFGR   80 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999999988877766654  46788999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++++++|+.++++++++++|.| ++ .|+||++||..+. +.++...|++||++
T Consensus        81 iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a  155 (263)
T 2a4k_A           81 LHGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLG  155 (263)
T ss_dssp             CCEEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSH
T ss_pred             CcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHH
Confidence            9999999998755  678899999999999999999999999999999 54 7999999999998 77788899999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++|++.++.|++++||+|++|+||+++|++.....+  ..       ...+ ... .+.+++.+|+|+|+++++|+++.
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~-------~~~~-~~~-~p~~~~~~p~dvA~~v~~l~s~~  224 (263)
T 2a4k_A          156 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP--WA-------WEQE-VGA-SPLGRAGRPEEVAQAALFLLSEE  224 (263)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH--HH-------HHHH-HHT-STTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCH--HH-------HHHH-Hhc-CCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999998754311  00       1111 122 23488999999999999999988


Q ss_pred             CCceeecEEEeCCCccccc
Q 023553          255 ARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~~  273 (280)
                      ..+++|+.+.+|||+....
T Consensus       225 ~~~~tG~~i~vdgG~~~~~  243 (263)
T 2a4k_A          225 SAYITGQALYVDGGRSIVG  243 (263)
T ss_dssp             GTTCCSCEEEESTTTTTC-
T ss_pred             ccCCcCCEEEECCCccccC
Confidence            8899999999999987654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-46  Score=319.79  Aligned_cols=257  Identities=26%  Similarity=0.388  Sum_probs=216.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-C---CeEEEecCCCCHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-P---DTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~---~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++... .   ++.++.||++++++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988887776665432 2   688899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCC----CCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-CCC
Q 023553           91 KFGTLDIMVNNAGISGAPCPD----IREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-LGP  165 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-~~~  165 (280)
                      +++++|+||||||+...  .+    +.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+. ++.
T Consensus        83 ~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  159 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIP--DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDF  159 (280)
T ss_dssp             HHSCCCEEEECCCCCCC--CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSS
T ss_pred             hcCCCCEEEECCCCCCC--CCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcc
Confidence            99999999999998754  44    77899999999999999999999999999997665 999999999998887 888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHH
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++............. .......... ..+.+++.+|+|+|+
T Consensus       160 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~-~~p~~~~~~pedvA~  237 (280)
T 1xkq_A          160 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQK-FYNFMASHKE-CIPIGAAGKPEHIAN  237 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHH-HHHHHHHCTT-TCTTSSCBCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccc-hHHHHHHHHc-CCCCCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999987653211000000 0001111111 123488999999999


Q ss_pred             HHHHhcCCC-CCceeecEEEeCCCcccccCcc
Q 023553          246 AVLFLASDE-ARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       246 ~i~~l~s~~-~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      ++++|+++. ..+++|+++.+|||+....+++
T Consensus       238 ~v~~l~s~~~~~~~tG~~i~vdgG~~~~~~~~  269 (280)
T 1xkq_A          238 IILFLADRNLSFYILGQSIVADGGTSLVMGTQ  269 (280)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTGGGCBGGG
T ss_pred             HHHHhcCcccccCccCCeEEECCCcccccCcc
Confidence            999999877 7899999999999988765554

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-45  Score=313.73  Aligned_cols=248  Identities=31%  Similarity=0.481  Sum_probs=212.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++++|++|||||++|||+++++.|+++|++|++++|+.+. ++..+.+.   . .++.+|+++++++.++++++.+.++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~-~~~~~D~~~~~~~~~~~~~~~~~~g   76 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG---G-AFFQVDLEDERERVRFVEEAAYALG   76 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT---C-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh---C-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999999877 66555554   3 6789999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus        77 ~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  154 (256)
T 2d1y_A           77 RVDVLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG  154 (256)
T ss_dssp             CCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHH
Confidence            99999999998755  6788999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +++.|+++++.|++++||+||+|+||+++|++............   .....+ .. ..+.+++++|+|+|+++++|+++
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~-~~-~~~~~~~~~~~dvA~~~~~l~s~  229 (256)
T 2d1y_A          155 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPE---RTRRDW-ED-LHALRRLGKPEEVAEAVLFLASE  229 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC-----------CHHH-HT-TSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCH---HHHHHH-Hh-cCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999998654210000000   001111 11 22348899999999999999998


Q ss_pred             CCCceeecEEEeCCCccccc
Q 023553          254 EARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ...+++|+.+.+|||+...-
T Consensus       230 ~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          230 KASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             GGTTCCSCEEEESTTGGGBC
T ss_pred             hhcCCCCCEEEECCCccccc
Confidence            88899999999999986543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=3.4e-46  Score=320.57  Aligned_cols=255  Identities=27%  Similarity=0.390  Sum_probs=215.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |.++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.. ..++.++.||+++++++.++++++.+.
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3368999999999999999999999999999999999998877766665532 346888999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHh--cccCCCceEEEEccccccccCCCCccch
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.  |++++.|+||++||..+..+.++...|+
T Consensus        97 ~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  174 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYS  174 (277)
T ss_dssp             TCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHH
T ss_pred             hCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHH
Confidence            9999999999998754  67889999999999999999999999999999  8776779999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh--hhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE--DAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      +||+|++.|+++++.|++++||+|++|+||+++|++............  ........+ ... .+.+++++|+|+|+++
T Consensus       175 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~p~~r~~~~~dvA~~v  252 (277)
T 2rhc_B          175 ASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRI-TAR-VPIGRYVQPSEVAEMV  252 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHH-HHH-STTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHH-Hhc-CCCCCCcCHHHHHHHH
Confidence            999999999999999999999999999999999998643211000000  000001111 122 2348899999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCccc
Q 023553          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++|+++...+++|+++.+|||+..
T Consensus       253 ~~l~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          253 AYLIGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHhCchhcCCCCcEEEECCCccc
Confidence            999998888999999999999753

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.8e-46  Score=317.18  Aligned_cols=242  Identities=37%  Similarity=0.508  Sum_probs=213.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++  ..++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--GDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999999988877766655  246788899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|+||||||+...  .++.+.+.++|++++++|+.+++.+++.++|.|++++.|+||++||..+..+.++...|++||++
T Consensus        80 iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  157 (254)
T 1hdc_A           80 VDGLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             CCEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHH
Confidence            9999999998754  67888999999999999999999999999999987778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCC-CHHHHHHHHHHhcCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~i~~l~s~  253 (280)
                      +++|+++++.|++++||+|++|+||+++|++.....+.. .        ..+ .. ..+.+++. +|+|+|+++++|+++
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~--------~~~-~~-~~p~~~~~~~~~dvA~~v~~l~s~  226 (254)
T 1hdc_A          158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ-G--------EGN-YP-NTPMGRVGNEPGEIAGAVVKLLSD  226 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC-S--------TTS-CT-TSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhH-H--------HHH-Hh-cCCCCCCCCCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999865421110 0        000 11 12337788 999999999999998


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+.+.+|||+..
T Consensus       227 ~~~~~tG~~~~vdgG~~~  244 (254)
T 1hdc_A          227 TSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             GGTTCCSCEEEESTTTTT
T ss_pred             hhcCCCCCEEEECCCccc
Confidence            888999999999999865

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-46  Score=316.01  Aligned_cols=249  Identities=32%  Similarity=0.492  Sum_probs=211.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. ..++.++.+|+++++++.++++++.+.++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999998877766665532 24688899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      +||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.++...|++||+|+
T Consensus        82 ~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  159 (256)
T 1geg_A           82 VIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV  159 (256)
T ss_dssp             EEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHH
Confidence            99999998754  6788999999999999999999999999999998766 69999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhh--hhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT--EDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      ++|+++++.|++++||+||+|+||+++|++...........  .........+ ... .+.+++.+|+|+|+++++|+++
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~p~~r~~~p~dvA~~v~~l~s~  237 (256)
T 1geg_A          160 RGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEF-AKR-ITLGRLSEPEDVAACVSYLASP  237 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHH-HTT-CTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHH-Hhc-CCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999864321000000  0000001111 122 2348899999999999999998


Q ss_pred             CCCceeecEEEeCCCcc
Q 023553          254 EARYISGTNLMVDGGFT  270 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++|+++.+|||+.
T Consensus       238 ~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          238 DSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             GGTTCCSCEEEESSSSS
T ss_pred             cccCCCCCEEEeCCCcc
Confidence            88899999999999975

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=4.3e-46  Score=315.80  Aligned_cols=246  Identities=35%  Similarity=0.534  Sum_probs=215.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.  .++.++.+|++++++++++++.+.+.+++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG--ERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--TTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999999888877776663  46788999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|+||||||+...  .++.+.+.++|++++++|+.+++.+++.++|.|++++ |+||++||..+..+.++...|++||++
T Consensus        81 id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a  157 (253)
T 1hxh_A           81 LNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHH
Confidence            9999999998754  6788999999999999999999999999999998777 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCC--CeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh--hccCCCCCCCHHHHHHHHHHh
Q 023553          175 VLGLNKNVAAELGKY--GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR--NANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       175 l~~~~~~la~e~~~~--gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +++|++.++.|++++  ||+|++|+||+++|++.....+...        ...+...  ...+.+++.+|+|+|+++++|
T Consensus       158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--------~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l  229 (253)
T 1hxh_A          158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGV--------SKEMVLHDPKLNRAGRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTC--------CHHHHBCBTTTBTTCCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhh--------hHHHHhhhhccCccCCCCCHHHHHHHHHHH
Confidence            999999999999888  9999999999999998654221110        0110111  022347899999999999999


Q ss_pred             cCCCCCceeecEEEeCCCccccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      +++...+++|+++.+|||+..++
T Consensus       230 ~s~~~~~~tG~~~~vdgG~~~~~  252 (253)
T 1hxh_A          230 ASDESSVMSGSELHADNSILGMG  252 (253)
T ss_dssp             HSGGGTTCCSCEEEESSSCTTTT
T ss_pred             cCccccCCCCcEEEECCCccccC
Confidence            99888899999999999987654

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-46  Score=321.44  Aligned_cols=255  Identities=29%  Similarity=0.412  Sum_probs=214.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CC---CeEEEecCCCCHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EP---DTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~---~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.. ..   ++.++.+|+++++++.++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            3468999999999999999999999999999999999998887776665532 22   6888999999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCCCCCC--CCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-CCC
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPD--IREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-LGP  165 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-~~~  165 (280)
                      .++++++|+||||||+...  .+  +.+.+.++|++++++|+.+++.++++++|.|++++ |+||++||..+..+. ++.
T Consensus       101 ~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~  177 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLA--DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGY  177 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTS
T ss_pred             HHhcCCCCEEEECCCcCcC--CCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCc
Confidence            9999999999999998755  44  88899999999999999999999999999998766 999999999998888 889


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHH
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|++||+|+++|++.++.|++++||+||+|+||+++|++............. .......... ..+.+++.+|+|+|+
T Consensus       178 ~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~-~~p~~r~~~pedvA~  255 (297)
T 1xhl_A          178 PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDK-LYSFIGSRKE-CIPVGHCGKPEEIAN  255 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHH-HHHHHHHCTT-TCTTSSCBCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccc-hHHHHHHHHh-cCCCCCCcCHHHHHH
Confidence            99999999999999999999999999999999999999987654211100000 0001111111 123488999999999


Q ss_pred             HHHHhcCCC-CCceeecEEEeCCCcccc
Q 023553          246 AVLFLASDE-ARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       246 ~i~~l~s~~-~~~~~G~~i~~dgG~~~~  272 (280)
                      ++++|+++. ..+++|+++.+|||+...
T Consensus       256 ~v~~l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          256 IIVFLADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhCCcccCCccCcEEEECCCcccc
Confidence            999999877 789999999999998654

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.1e-46  Score=315.70  Aligned_cols=234  Identities=30%  Similarity=0.428  Sum_probs=205.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++++|++|||||++|||+++|+.|+++|++|++++|+.+...        ...+.++.+|+++++++.++++++.+++
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   94 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--------DPDIHTVAGDISKPETADRIVREGIERF   94 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--------STTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--------cCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence            45689999999999999999999999999999999999876432        1368889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc--CCCCccchh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--GLGPHAYTG  170 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~--~~~~~~Y~~  170 (280)
                      |++|++|||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+  .++...|++
T Consensus        95 g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~  172 (260)
T 3un1_A           95 GRIDSLVNNAGVFLA--KPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASL  172 (260)
T ss_dssp             SCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHH
Confidence            999999999999865  7889999999999999999999999999999999888899999999888644  345689999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.....             ...... ..+.+++.+|+|+|+++++|
T Consensus       173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-------------~~~~~~-~~p~~r~~~~~dva~av~~L  238 (260)
T 3un1_A          173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET-------------HSTLAG-LHPVGRMGEIRDVVDAVLYL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG-------------HHHHHT-TSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH-------------HHHHhc-cCCCCCCcCHHHHHHHHHHh
Confidence            9999999999999999999999999999999999864311             111112 23458999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                        ..+.+++|+++.+|||+...
T Consensus       239 --~~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          239 --EHAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             --HHCTTCCSCEEEESTTGGGC
T ss_pred             --cccCCCCCcEEEECCCeecc
Confidence              35679999999999998764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=9.4e-46  Score=314.87  Aligned_cols=248  Identities=29%  Similarity=0.394  Sum_probs=214.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.. ..++.++.||+++++++.++++++.+.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999998877766655532 3468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||+.... .++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..+..+.++...|++||
T Consensus        90 g~iD~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  168 (260)
T 2zat_A           90 GGVDILVSNAAVNPFF-GNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSK  168 (260)
T ss_dssp             SCCCEEEECCCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHH
Confidence            9999999999986422 567889999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +++++|++.++.|++++||+||+|+||+++|++.........        ........ .+.+++++|+|+|+++++|++
T Consensus       169 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~dva~~v~~l~s  239 (260)
T 2zat_A          169 TALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKA--------RKEYMKES-LRIRRLGNPEDCAGIVSFLCS  239 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHH--------HHHHHHHH-HTCSSCBCGGGGHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChH--------HHHHHHhc-CCCCCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999998643211110        01111122 234789999999999999999


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|+++.+|||+..
T Consensus       240 ~~~~~~tG~~~~vdgG~~~  258 (260)
T 2zat_A          240 EDASYITGETVVVGGGTAS  258 (260)
T ss_dssp             GGGTTCCSCEEEESTTCCC
T ss_pred             cccCCccCCEEEECCCccc
Confidence            8888999999999999754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=2.3e-45  Score=315.77  Aligned_cols=249  Identities=20%  Similarity=0.257  Sum_probs=211.5

Q ss_pred             cccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCc--chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQD--NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        12 ~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .|.++++|++|||||+  +|||+++|+.|+++|++|++++|+.  +.++++.+..   ..+.++.||+++++++++++++
T Consensus        20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~   96 (280)
T 3nrc_A           20 HMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF---NPAAVLPCDVISDQEIKDLFVE   96 (280)
T ss_dssp             --CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG---CCSEEEECCTTCHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc---CCceEEEeecCCHHHHHHHHHH
Confidence            3456899999999988  7899999999999999999999987  3333333322   3578899999999999999999


Q ss_pred             HHHHhCCccEEEECCCCCCCC--CCCCCC-CCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC
Q 023553           88 TVEKFGTLDIMVNNAGISGAP--CPDIRE-ADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~  164 (280)
                      +.+.++++|+||||||+....  ..++.+ .+.++|++.+++|+.++++++++++|.|+++ .|+||++||.++..+.++
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~  175 (280)
T 3nrc_A           97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPS  175 (280)
T ss_dssp             HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTT
T ss_pred             HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCC
Confidence            999999999999999987531  134444 8999999999999999999999999999755 699999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ...|++||+|+++|+++++.|++++||+|++|+||+++|++.........        ........ .+.+++.+|+|+|
T Consensus       176 ~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~p~~~~~~pedvA  246 (280)
T 3nrc_A          176 YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKK--------MLDYNAMV-SPLKKNVDIMEVG  246 (280)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHH--------HHHHHHHH-STTCSCCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHH--------HHHHHHhc-CCCCCCCCHHHHH
Confidence            99999999999999999999999999999999999999999766543211        11122222 3348899999999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCCccccc
Q 023553          245 NAVLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      +++++|+++...++||++|.+|||+...+
T Consensus       247 ~~v~~l~s~~~~~~tG~~i~vdgG~~~~~  275 (280)
T 3nrc_A          247 NTVAFLCSDMATGITGEVVHVDAGYHCVS  275 (280)
T ss_dssp             HHHHHTTSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHhCcccCCcCCcEEEECCCccccC
Confidence            99999999888999999999999998764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-45  Score=315.31  Aligned_cols=252  Identities=21%  Similarity=0.243  Sum_probs=207.7

Q ss_pred             cccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ...++++|++|||||+  +|||+++|+.|+++|++|++++|+....+...+.....+.+.++.||++++++++++++++.
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   87 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLK   87 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHH
Confidence            3457899999999998  99999999999999999999999865444333322223457889999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCC--CCCCCC-CCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           90 EKFGTLDIMVNNAGISGAP--CPDIRE-ADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                      ++++++|++|||||+....  ..++.+ .+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.++..
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  165 (271)
T 3ek2_A           88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYN  165 (271)
T ss_dssp             HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTT
T ss_pred             HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCcc
Confidence            9999999999999987531  033444 899999999999999999999999999964  68999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+|+++|+++++.|++++||+|++|+||+++|++.......+        .......... +.+++.+|+|+|++
T Consensus       166 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~pedva~~  236 (271)
T 3ek2_A          166 TMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFG--------KILDFVESNS-PLKRNVTIEQVGNA  236 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHH--------HHHHHHHHHS-TTSSCCCHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchH--------HHHHHHHhcC-CcCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999876542211        1122222233 34889999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCcccccC
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      +++|+++...++||++|.+|||+....+
T Consensus       237 i~~l~s~~~~~~tG~~i~vdgG~~~~~~  264 (271)
T 3ek2_A          237 GAFLLSDLASGVTAEVMHVDSGFNAVVG  264 (271)
T ss_dssp             HHHHHSGGGTTCCSEEEEESTTGGGBCC
T ss_pred             HHHHcCcccCCeeeeEEEECCCeeeehh
Confidence            9999998889999999999999987643

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=2.2e-45  Score=317.20  Aligned_cols=245  Identities=25%  Similarity=0.372  Sum_probs=205.8

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhC--CCCCeEEEecCCCC----HHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLG--GEPDTFFCHCDVTK----EEDVCSA   84 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~--~~~~~~~~~~D~~~----~~~~~~~   84 (280)
                      ...++++|++|||||++|||+++|+.|+++|++|++++|+. +.+++..+++.  ...++.++.+|+++    ++++.++
T Consensus        17 ~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~   96 (288)
T 2x9g_A           17 RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEI   96 (288)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHH
Confidence            34568899999999999999999999999999999999998 77766666553  23578889999999    9999999


Q ss_pred             HHHHHHHhCCccEEEECCCCCCCCCCCC-----CC-----CCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC------Cc
Q 023553           85 VDLTVEKFGTLDIMVNNAGISGAPCPDI-----RE-----ADLSEFEKVFDINVKGVFHGMKHAARIMIPQT------KG  148 (280)
Q Consensus        85 ~~~~~~~~g~id~li~~ag~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~g  148 (280)
                      ++++.+.++++|+||||||+...  .++     .+     .+.++|++.+++|+.+++.+++.++|.|++++      .|
T Consensus        97 ~~~~~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g  174 (288)
T 2x9g_A           97 INSCFRAFGRCDVLVNNASAFYP--TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNL  174 (288)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC--CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCE
T ss_pred             HHHHHHhcCCCCEEEECCCCCCC--CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCe
Confidence            99999999999999999998754  555     56     88899999999999999999999999998766      78


Q ss_pred             eEEEEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHh
Q 023553          149 TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA  228 (280)
Q Consensus       149 ~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  228 (280)
                      +||++||..+..+.++...|++||+|+++|++.++.|++++||+||+|+||+++|++ . ..  ...       ...+. 
T Consensus       175 ~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~--~~~-------~~~~~-  242 (288)
T 2x9g_A          175 SIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG--EEE-------KDKWR-  242 (288)
T ss_dssp             EEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC--HHH-------HHHHH-
T ss_pred             EEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC--hHH-------HHHHH-
Confidence            999999999999999999999999999999999999999999999999999999998 3 21  110       11121 


Q ss_pred             hhccCCCCC-CCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          229 RNANMQGTE-LTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       229 ~~~~~~~~~-~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .. .+.+++ .+|+|+|+++++|+++...+++|+++.+|||+..
T Consensus       243 ~~-~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          243 RK-VPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             HT-CTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hh-CCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence            12 234788 9999999999999998889999999999999864

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=3e-45  Score=315.52  Aligned_cols=253  Identities=26%  Similarity=0.428  Sum_probs=211.0

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-HHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +..+++++|++|||||++|||+++|+.|+++|++|++++|+.+. .++..+.+.. ..++.++.+|+++++++.++++++
T Consensus        22 ~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  101 (283)
T 1g0o_A           22 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA  101 (283)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHH
Confidence            44567899999999999999999999999999999999998654 3443343322 346888999999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC-Ccc
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-PHA  167 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~-~~~  167 (280)
                      .+.++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|  ++.|+||++||..+..+.++ ...
T Consensus       102 ~~~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~  177 (283)
T 1g0o_A          102 VKIFGKLDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAV  177 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHH
T ss_pred             HHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcc
Confidence            9999999999999998755  678899999999999999999999999999999  35689999999999887764 889


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc----chh-hhhhhhhhHHHHhhhccCCCCCCCHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE----EER-TEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.......    ... ..   .....+......+.+++.+|+|
T Consensus       178 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~r~~~p~d  254 (283)
T 1g0o_A          178 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSN---EEVDEYAAVQWSPLRRVGLPID  254 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCH---HHHHHHHHHHSCTTCSCBCHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCH---HHHHHHHhhcCCCCCCCcCHHH
Confidence            999999999999999999999999999999999999986542110    000 00   0111121111234589999999


Q ss_pred             HHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          243 VANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       243 va~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +|++++||+++...++||+++.+|||+.
T Consensus       255 vA~~v~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          255 IARVVCFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHhCccccCcCCCEEEeCCCcc
Confidence            9999999999888899999999999975

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1.7e-46  Score=329.13  Aligned_cols=247  Identities=30%  Similarity=0.472  Sum_probs=213.1

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC----------cchHHHHHHHhCC-CCCeEEEecCCCCH
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ----------DNLGQQVCQSLGG-EPDTFFCHCDVTKE   78 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~----------~~~~~~~~~~~~~-~~~~~~~~~D~~~~   78 (280)
                      +.++.+++||++|||||++|||+++|+.|+++|++|++++|+          .+..++..+++.. ..++.++.||++|+
T Consensus        19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW   98 (322)
T ss_dssp             ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH
T ss_pred             CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence            344567999999999999999999999999999999999987          5666666665543 35788899999999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC------CceEEE
Q 023553           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT------KGTIIS  152 (280)
Q Consensus        79 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~g~iv~  152 (280)
                      +++.++++++.+++|++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|.|.+.+      .|+||+
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~  176 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRD--RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIIN  176 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEE
Confidence            99999999999999999999999999865  7889999999999999999999999999999986432      389999


Q ss_pred             EccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc
Q 023553          153 ICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN  232 (280)
Q Consensus       153 isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (280)
                      +||..+..+.++...|++||+|+++|+++++.|++++||+||+|+|| +.|++...........              ..
T Consensus       177 isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~--------------~~  241 (322)
T 3qlj_A          177 TSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMAT--------------QD  241 (322)
T ss_dssp             ECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------------------
T ss_pred             EcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhc--------------cc
Confidence            99999999999999999999999999999999999999999999999 9999877654331110              00


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccccc
Q 023553          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       233 ~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ...++.+|+|+|++++||+++...++||++|.+|||+....
T Consensus       242 ~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~  282 (322)
T 3qlj_A          242 QDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVA  282 (322)
T ss_dssp             --CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEE
T ss_pred             cccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccC
Confidence            01356799999999999999989999999999999997754

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=8.2e-46  Score=327.12  Aligned_cols=242  Identities=20%  Similarity=0.257  Sum_probs=213.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-------HHHHHHHhCC-CCCeEEEecCCCCHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-------GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-------~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~   84 (280)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++.. ..++.++.||++|+++++++
T Consensus        40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            456899999999999999999999999999999999998764       3344444432 35788899999999999999


Q ss_pred             HHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc--C
Q 023553           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--G  162 (280)
Q Consensus        85 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~--~  162 (280)
                      ++++.++++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+  .
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~  197 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISL--TNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWF  197 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGT
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCC
Confidence            99999999999999999999865  7889999999999999999999999999999998888899999999999887  6


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCc-eeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHH
Q 023553          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA-VATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      ++...|++||+|+++|+++++.|++ +||+||+|+||+ ++|++.......                   .+.+++.+|+
T Consensus       198 ~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~~-------------------~~~~r~~~pe  257 (346)
T 3kvo_A          198 KQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGGP-------------------GIESQCRKVD  257 (346)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC---------------------CGGGCBCTH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhccc-------------------cccccCCCHH
Confidence            7889999999999999999999999 899999999995 999876432211                   1126788999


Q ss_pred             HHHHHHHHhcCCCCCceeecEEEeCCCcccccCcccc
Q 023553          242 DVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRV  278 (280)
Q Consensus       242 dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~  278 (280)
                      |+|+++++|+++ .+++||+++ +|||+....+.+|.
T Consensus       258 dvA~~v~~L~s~-~~~itG~~i-vdgg~~~~~g~~~~  292 (346)
T 3kvo_A          258 IIADAAYSIFQK-PKSFTGNFV-IDENILKEEGIENF  292 (346)
T ss_dssp             HHHHHHHHHHTS-CTTCCSCEE-EHHHHHHHTTCCCG
T ss_pred             HHHHHHHHHHhc-CCCCCceEE-ECCcEehhceeecc
Confidence            999999999999 889999999 99999888777765

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.7e-45  Score=314.56  Aligned_cols=244  Identities=23%  Similarity=0.386  Sum_probs=210.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.++.+|++|||||++|||+++|++|+++|++|++. .|+.+..++..+.+.. ..++.++.+|+++++++.++++++.+
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999665 5666666666655532 35788999999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcc-cCCCceEEEEccccccccCCCCccch
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .++++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.+++.|. +++.++||++||..+..+.++...|+
T Consensus       101 ~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  178 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIARD--AAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYS  178 (267)
T ss_dssp             HHCCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HhCCccEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhH
Confidence            99999999999999865  7888999999999999999999999999999886 56679999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|++.++.|++++||+|++|+||+++|++....   ..       ....+ ... .+.+++.+|+|+|+++++
T Consensus       179 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~-------~~~~~-~~~-~p~~~~~~~edva~~~~~  246 (267)
T 4iiu_A          179 AAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ES-------ALKEA-MSM-IPMKRMGQAEEVAGLASY  246 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HH-------HHHHH-HHT-CTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HH-------HHHHH-Hhc-CCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999987543   10       01111 122 334889999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcc
Q 023553          250 LASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+++...++||++|.+|||+.
T Consensus       247 L~s~~~~~itG~~i~vdGG~~  267 (267)
T 4iiu_A          247 LMSDIAGYVTRQVISINGGML  267 (267)
T ss_dssp             HHSGGGTTCCSCEEEESTTCC
T ss_pred             HhCCcccCccCCEEEeCCCcC
Confidence            999988999999999999973

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1e-45  Score=313.35  Aligned_cols=239  Identities=18%  Similarity=0.161  Sum_probs=195.6

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      |++++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.. ..++.++.||+++++++.++++++.+
T Consensus         1 M~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            1 MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             ----CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            34578999999999999999999999999999999999999988888777643 35788999999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      . +++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++
T Consensus        81 ~-g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  157 (252)
T 3h7a_A           81 H-APLEVTIFNVGANVN--FPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFAS  157 (252)
T ss_dssp             H-SCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHH
T ss_pred             h-CCceEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHH
Confidence            9 999999999999865  7889999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEE-EEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRV-NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v-~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      ||+|+++|+++++.|++++||+| |+|+||+++|++.....+....         .+ .. ..+.+ +.+|+|+|+++++
T Consensus       158 sKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~---------~~-~~-~~~~~-~~~pedvA~~~~~  225 (252)
T 3h7a_A          158 AKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFG---------KD-AL-ANPDL-LMPPAAVAGAYWQ  225 (252)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------CCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhh---------hh-hh-cCCcc-CCCHHHHHHHHHH
Confidence            99999999999999999999999 9999999999998765432110         00 11 11224 8999999999999


Q ss_pred             hcCCCCCceeecEEEe
Q 023553          250 LASDEARYISGTNLMV  265 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~  265 (280)
                      |++.+..+.+|++..-
T Consensus       226 l~s~~~~~~~~~i~~~  241 (252)
T 3h7a_A          226 LYQQPKSAWTFEMEIR  241 (252)
T ss_dssp             HHHCCGGGBCSEEEEB
T ss_pred             HHhCchhcceeeEEee
Confidence            9998888888887654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=2.6e-45  Score=313.75  Aligned_cols=253  Identities=24%  Similarity=0.226  Sum_probs=208.0

Q ss_pred             ccccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCcch-HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +.++++|++|||||  ++|||+++|+.|+++|++|++++|+.+. +++..+++.  .++.++.+|++++++++++++++.
T Consensus         2 m~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~   79 (269)
T 2h7i_A            2 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP--AKAPLLELDVQNEEHLASLAGRVT   79 (269)
T ss_dssp             CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS--SCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcC--CCceEEEccCCCHHHHHHHHHHHH
Confidence            34588999999999  9999999999999999999999998765 355444442  357788999999999999999999


Q ss_pred             HHhC---CccEEEECCCCCCCC---CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC
Q 023553           90 EKFG---TLDIMVNNAGISGAP---CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL  163 (280)
Q Consensus        90 ~~~g---~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~  163 (280)
                      +.+|   ++|+||||||+....   ..++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+ .+.+
T Consensus        80 ~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~~~  156 (269)
T 2h7i_A           80 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RAMP  156 (269)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SCCT
T ss_pred             HHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cccC
Confidence            9999   999999999987520   157888999999999999999999999999999965  489999999876 6777


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc--chhhhhhhhhhHHHHhhhccCCC-CCCCH
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE--EERTEDAMVGFRNFVARNANMQG-TELTA  240 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  240 (280)
                      .+..|++||+|+++|+++++.|++++||+||+|+||+++|++.......  .+................. +.+ ++.+|
T Consensus       157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~rr~~~p  235 (269)
T 2h7i_A          157 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA-PIGWNMKDA  235 (269)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC-TTCCCTTCC
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccC-CcccCCCCH
Confidence            8899999999999999999999999999999999999999986542110  0000000001111112222 347 69999


Q ss_pred             HHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          241 NDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       241 ~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+|++++||+++.+.++||+++.+|||+..
T Consensus       236 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          236 TPVAKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             HHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HHHHHHHHHHhCchhccCcceEEEecCCeee
Confidence            9999999999999899999999999999764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2.5e-45  Score=311.45  Aligned_cols=250  Identities=28%  Similarity=0.468  Sum_probs=209.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +++|++|||||++|||+++++.|+++|++|++++|+.+  ++..+++.. ..++.++.+|+++++++.++++++.+++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999999876  333333322 346888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||++
T Consensus        80 id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  157 (255)
T 2q2v_A           80 VDILVNNAGIQHV--APVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHG  157 (255)
T ss_dssp             CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHH
Confidence            9999999998754  67888999999999999999999999999999988878999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh-hhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +++|++.++.|++++||+|++|+||+++|++............ ........+... ..+.+++++|+|+|+++++|+++
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~dvA~~~~~l~s~  236 (255)
T 2q2v_A          158 VVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAE-KQPSLAFVTPEHLGELVLFLCSE  236 (255)
T ss_dssp             HHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTT-TCTTCCCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhc-cCCCCCCcCHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999998653210000000 000000111011 23448899999999999999998


Q ss_pred             CCCceeecEEEeCCCcc
Q 023553          254 EARYISGTNLMVDGGFT  270 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++|+++.+|||+.
T Consensus       237 ~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          237 AGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             ccCCCCCCEEEECCCcc
Confidence            88899999999999975

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.4e-45  Score=312.91  Aligned_cols=251  Identities=33%  Similarity=0.491  Sum_probs=213.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+.+..  ++.++.+|++|++++.++++++.+++|
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~d~~~v~~~~~~~~~~~g   85 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN--GGFAVEVDVTKRASVDAAMQKAIDALG   85 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT--CCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999999998887776665543  577889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.++...|++||
T Consensus        86 ~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (263)
T 3ak4_A           86 GFDLLCANAGVSTM--RPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASK  163 (263)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHH
Confidence            99999999998754  6788999999999999999999999999999998776 79999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcc--hhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE--ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ++++.|++.++.|++++||+|++|+||+++|++........  ............+ ... .+.+++++|+|+|+++++|
T Consensus       164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~p~~~~~~~~dvA~~v~~l  241 (263)
T 3ak4_A          164 FAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEY-VSL-TPLGRIEEPEDVADVVVFL  241 (263)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHH-HHT-CTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHH-Hhc-CCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999864321000  0000000001111 122 2348899999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcc
Q 023553          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++...+++|+++.+|||+.
T Consensus       242 ~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          242 ASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             HSGGGTTCCSCEEEESSSSS
T ss_pred             hCccccCCCCCEEEECcCEe
Confidence            99888899999999999975

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-45  Score=312.37  Aligned_cols=246  Identities=20%  Similarity=0.225  Sum_probs=206.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ||++|||||++|||+++|++|+++|  +.|++++|+.+.+++..+.+.  .++.++.+|++|+++++++++++.+++|++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG--DRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG--GGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC--CceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            7999999999999999999999985  789999999988887777663  468889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |+||||||+.... .++.+.+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..+.++...|++||+|+
T Consensus        80 d~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~  157 (254)
T 3kzv_A           80 DSLVANAGVLEPV-QNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAAL  157 (254)
T ss_dssp             CEEEEECCCCCCC-TTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHH
T ss_pred             cEEEECCcccCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHH
Confidence            9999999986432 6788999999999999999999999999999997655 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC-
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE-  254 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~-  254 (280)
                      ++|+++++.|+  +||+||+|+||+++|++.............. .......... .+.+++.+|+|+|++++||+++. 
T Consensus       158 ~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~r~~~p~dva~~v~~L~s~~~  233 (254)
T 3kzv_A          158 NHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMS-AEQLKMFRGL-KENNQLLDSSVPATVYAKLALHGI  233 (254)
T ss_dssp             HHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSC-HHHHHHHHHH-HTTC----CHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccC-HHHHHHHHHH-HhcCCcCCcccHHHHHHHHHhhcc
Confidence            99999999998  6899999999999999987654321100000 0111112222 23489999999999999999988 


Q ss_pred             CCceeecEEEeCCCccc
Q 023553          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ..++||+++.+|||...
T Consensus       234 ~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          234 PDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             CGGGTTCEEETTCGGGG
T ss_pred             cCCCCccEEEecCcccc
Confidence            48999999999999754

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-45  Score=322.65  Aligned_cols=243  Identities=25%  Similarity=0.314  Sum_probs=210.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhC--CCCCeEEEecCCCCHH------------
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLG--GEPDTFFCHCDVTKEE------------   79 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------   79 (280)
                      ++++|++|||||++|||+++|+.|+++|++|++++ |+.+.+++..+++.  ...++.++.+|+++++            
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            48899999999999999999999999999999999 99887777666553  2357888999999999            


Q ss_pred             -----HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCC--------------HHHHHHHhhhhhhhHHHHHHHHHH
Q 023553           80 -----DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD--------------LSEFEKVFDINVKGVFHGMKHAAR  140 (280)
Q Consensus        80 -----~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~  140 (280)
                           ++.++++++.+.++++|+||||||+...  .++.+.+              .++|++++++|+.+++.++++++|
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  200 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  200 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 9999999999999999999999998765  6777888              999999999999999999999999


Q ss_pred             hcccCC------CceEEEEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcch
Q 023553          141 IMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE  214 (280)
Q Consensus       141 ~l~~~~------~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~  214 (280)
                      .|.+++      .|+||++||..+..+.++...|++||+|++.|++.++.|++++||+||+|+||+++|++ .. .+  .
T Consensus       201 ~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~-~~--~  276 (328)
T 2qhx_A          201 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM-PP--A  276 (328)
T ss_dssp             HHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS-CH--H
T ss_pred             HHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc-cH--H
Confidence            998766      79999999999999999999999999999999999999999999999999999999998 32 21  0


Q ss_pred             hhhhhhhhhHHHHhhhccCCC-CCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          215 RTEDAMVGFRNFVARNANMQG-TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      .       ...+ ... .+.+ ++.+|+|+|+++++|+++...+++|++|.+|||+...
T Consensus       277 ~-------~~~~-~~~-~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  326 (328)
T 2qhx_A          277 V-------WEGH-RSK-VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  326 (328)
T ss_dssp             H-------HHHH-HTT-CTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             H-------HHHH-Hhh-CCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence            0       1111 122 2336 8999999999999999988899999999999998754

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=5.9e-46  Score=314.95  Aligned_cols=240  Identities=31%  Similarity=0.482  Sum_probs=199.0

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +....++++|+++||||++|||+++++.|+++|++|++++|+.+.++          .+.++.+|++|+++++++++++.
T Consensus        13 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~Dl~d~~~v~~~~~~~~   82 (253)
T 2nm0_A           13 GLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE----------GFLAVKCDITDTEQVEQAYKEIE   82 (253)
T ss_dssp             -------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------TSEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc----------cceEEEecCCCHHHHHHHHHHHH
Confidence            44456788999999999999999999999999999999999876432          26788999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+
T Consensus        83 ~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (253)
T 2nm0_A           83 ETHGPVEVLIANAGVTKD--QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYA  160 (253)
T ss_dssp             HHTCSCSEEEEECSCCTT--TC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHH
Confidence            999999999999998754  678889999999999999999999999999999877789999999999998888889999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|++.|++.++.|++++||+||+|+||+++|++.....+.  .       ...+ ... .+.+++.+|+|+|+++++
T Consensus       161 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--~-------~~~~-~~~-~p~~~~~~p~dvA~~i~~  229 (253)
T 2nm0_A          161 ASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDE--Q-------RANI-VSQ-VPLGRYARPEEIAATVRF  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------C-------HHHH-HTT-CTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHH--H-------HHHH-Hhc-CCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999986542110  0       0111 111 234789999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccc
Q 023553          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+++...+++|+++.+|||+...
T Consensus       230 l~s~~~~~~tG~~i~vdGG~~~~  252 (253)
T 2nm0_A          230 LASDDASYITGAVIPVDGGLGMG  252 (253)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTCC
T ss_pred             HhCccccCCcCcEEEECCccccC
Confidence            99988889999999999998653

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=4.7e-45  Score=310.68  Aligned_cols=238  Identities=39%  Similarity=0.634  Sum_probs=212.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..++..+.+..  .+.++.+|+++++++.++++++.++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD--AARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG--GEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc--CceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999999998887776665542  477889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus        81 ~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (260)
T 1nff_A           81 GLHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF  158 (260)
T ss_dssp             CCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence            99999999998755  6788899999999999999999999999999998777899999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      ++++|++.++.|++++||+|++|+||+++|++.. . ..+           .+ .  ..+.+++.+|+|+|+++++|+++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~~~-----------~~-~--~~~~~~~~~~~dvA~~v~~l~s~  222 (260)
T 1nff_A          159 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-VPE-----------DI-F--QTALGRAAEPVEVSNLVVYLASD  222 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-SCT-----------TC-S--CCSSSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-chh-----------hH-H--hCccCCCCCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999864 1 110           00 0  12347899999999999999998


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+++.+|||+..
T Consensus       223 ~~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          223 ESSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             cccCCcCCEEEECCCeec
Confidence            888999999999999865

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.1e-45  Score=312.16  Aligned_cols=237  Identities=31%  Similarity=0.413  Sum_probs=199.0

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ...++++|++|||||++|||+++++.|+++|++|++++|+.+..++          ...+.+|+++++++.++++++.+.
T Consensus         9 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~D~~~~~~~~~~~~~~~~~   78 (247)
T 1uzm_A            9 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG----------LFGVEVDVTDSDAVDRAFTAVEEH   78 (247)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT----------SEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH----------hcCeeccCCCHHHHHHHHHHHHHH
Confidence            3456889999999999999999999999999999999998765332          124789999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus        79 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  156 (247)
T 1uzm_A           79 QGPVEVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAAS  156 (247)
T ss_dssp             HSSCSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHH
Confidence            9999999999998754  67889999999999999999999999999999988778999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|++.|++.++.|++++||+|++|+||+++|++.....+ .         ........ .+.+++.+|+|+|+++++|+
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~---------~~~~~~~~-~p~~~~~~~~dvA~~~~~l~  225 (247)
T 1uzm_A          157 KAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE-R---------IQQGALQF-IPAKRVGTPAEVAGVVSFLA  225 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH-H---------HHHHHGGG-CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCH-H---------HHHHHHhc-CCCCCCcCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999998654211 0         01111112 23478999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+++.+|||+..
T Consensus       226 s~~~~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          226 SEDASYISGAVIPVDGGMGM  245 (247)
T ss_dssp             SGGGTTCCSCEEEESTTTTC
T ss_pred             CccccCCcCCEEEECCCccc
Confidence            98888999999999999764

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=5.5e-45  Score=310.35  Aligned_cols=253  Identities=21%  Similarity=0.244  Sum_probs=209.2

Q ss_pred             cccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        12 ~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +..++++|++|||||+  +|||+++++.|+++|++|++++|+.+ .++..+++.. .+.+.++.+|++++++++++++++
T Consensus         2 ~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             EEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHH
Confidence            3456889999999999  99999999999999999999999875 2222222211 123678899999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           89 VEKFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                      .++++++|+||||||+....  ..++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.++..
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  158 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYN  158 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCH
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCch
Confidence            99999999999999986420  146778999999999999999999999999999964  58999999999999989999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+|++.|++.++.|++++||+||+|+||+++|++.........        ......+. .+.+++.+|+|+|++
T Consensus       159 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--------~~~~~~~~-~p~~~~~~~~dva~~  229 (261)
T 2wyu_A          159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTK--------MYDRVAQT-APLRRNITQEEVGNL  229 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHH--------HHHHHHHH-STTSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHH--------HHHHHHhc-CCCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999998654321110        11111122 234889999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCcccccCcc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      +++|+++...+++|+++.+|||+...+.++
T Consensus       230 v~~l~s~~~~~~tG~~~~vdgG~~~~~~~~  259 (261)
T 2wyu_A          230 GLFLLSPLASGITGEVVYVDAGYHIMGMEL  259 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGBC---
T ss_pred             HHHHcChhhcCCCCCEEEECCCccccCCCC
Confidence            999999888899999999999998765443

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.6e-45  Score=312.26  Aligned_cols=244  Identities=25%  Similarity=0.355  Sum_probs=211.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++|++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++.. ..++.++.+|+++.++++++++++.+.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999885 6666666666655533 3578889999999999999999998776


Q ss_pred             C------CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           93 G------TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        93 g------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                      +      ++|++|||||+...  .++.+.+.++|++++++|+.+++.+++.++|.|.  +.++||++||..+..+.++..
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~iv~isS~~~~~~~~~~~  159 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR--DNSRIINISSAATRISLPDFI  159 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE--EEEEEEEECCGGGTSCCTTBH
T ss_pred             cccccCCcccEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC--CCCEEEEeCChhhccCCCCcc
Confidence            4      49999999998755  7788999999999999999999999999999994  358999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+|+++|+++++.|++++||+|++|+||+++|++.........        ...+.... .+.+++.+|+|+|++
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~dva~~  230 (255)
T 3icc_A          160 AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPM--------MKQYATTI-SAFNRLGEVEDIADT  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHH--------HHHHHHHT-STTSSCBCHHHHHHH
T ss_pred             hhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHH--------HHHhhhcc-CCcCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999876544321        12222222 334899999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCccc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++|+++...+++|+++.+|||+.+
T Consensus       231 ~~~l~s~~~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          231 AAFLASPDSRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSTTC
T ss_pred             HHHHhCcccCCccCCEEEecCCeeC
Confidence            9999999899999999999999863

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=4.4e-45  Score=309.06  Aligned_cols=246  Identities=28%  Similarity=0.354  Sum_probs=195.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++++|++|||||++|||+++++.|+++|++|++++|+.+.        ... .+.++.+|++|++++.++++++.++++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~-~~~~~~~D~~d~~~~~~~~~~~~~~~g   73 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQY-PFATEVMDVADAAQVAQVCQRLLAETE   73 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCC-SSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcC-CceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999998762        111 267889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus        74 ~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (250)
T 2fwm_X           74 RLDALVNAAGILRM--GATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKA  151 (250)
T ss_dssp             CCCEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCcCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHH
Confidence            99999999998755  6788999999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +++.|++.++.|++++||+|++|+||+++|++.......+.........+.... ....+.+++.+|+|+|+++++|+++
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~p~dvA~~v~~l~s~  230 (250)
T 2fwm_X          152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQF-KLGIPLGKIARPQEIANTILFLASD  230 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------CHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcc-cccCCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999986543211100000000000000 0012347899999999999999998


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+++.+|||+..
T Consensus       231 ~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          231 LASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             GGTTCCSCEEEESTTTTT
T ss_pred             cccCCCCCEEEECCCccc
Confidence            888999999999999764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-45  Score=311.02  Aligned_cols=241  Identities=33%  Similarity=0.500  Sum_probs=195.0

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ...++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+.+.  ..+.++.+|+++.+++.+++++    
T Consensus         8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~----   81 (249)
T 3f9i_A            8 HMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK--DNYTIEVCNLANKEECSNLISK----   81 (249)
T ss_dssp             -CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--SSEEEEECCTTSHHHHHHHHHT----
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc--cCccEEEcCCCCHHHHHHHHHh----
Confidence            3457899999999999999999999999999999999999998888877775  3678889999999998777664    


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      .+++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus        82 ~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  159 (249)
T 3f9i_A           82 TSNLDILVCNAGITSD--TLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCAS  159 (249)
T ss_dssp             CSCCSEEEECCC---------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHH
Confidence            4799999999998865  67778899999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++|+++++.|++++||+|++|+||+++|++.....+..          ....... .+.+++.+|+|+|+++++|+
T Consensus       160 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----------~~~~~~~-~~~~~~~~~~dva~~~~~l~  228 (249)
T 3f9i_A          160 KAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQ----------REAIVQK-IPLGTYGIPEDVAYAVAFLA  228 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHH----------HHHHHHH-CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHH----------HHHHHhc-CCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999876643211          1111122 23489999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+++.+|||+.+
T Consensus       229 s~~~~~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          229 SNNASYITGQTLHVNGGMLM  248 (249)
T ss_dssp             SGGGTTCCSCEEEESTTSSC
T ss_pred             CCccCCccCcEEEECCCEee
Confidence            98889999999999999875

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-45  Score=312.94  Aligned_cols=248  Identities=34%  Similarity=0.524  Sum_probs=211.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.   .+.++.||++|+++++++++++.++++
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP---GAVFILCDVTQEDDVKTLVSETIRRFG   81 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT---TEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CCeEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            34789999999999999999999999999999999999888777766654   377899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+.... .++.+.+.++|++.+++|+.++++++++++|.|+++ .|+||++||..+..+.++...|++||+
T Consensus        82 ~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  159 (270)
T 1yde_A           82 RLDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKG  159 (270)
T ss_dssp             CCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHH
Confidence            999999999986432 578889999999999999999999999999999654 599999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      ++++|+++++.|++++||+||+|+||+++|++............   ......  ....+.+++.+|+|+|++++||+++
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~--~~~~p~~r~~~p~dva~~v~~L~s~  234 (270)
T 1yde_A          160 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPR---ASIREG--MLAQPLGRMGQPAEVGAAAVFLASE  234 (270)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHH---HHHHHH--HHTSTTSSCBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchH---HHHHHH--hhcCCCCCCcCHHHHHHHHHHHccc
Confidence            99999999999999999999999999999998653211000000   001111  1123458899999999999999997


Q ss_pred             CCCceeecEEEeCCCcccc
Q 023553          254 EARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~  272 (280)
                       ..++||+++.+|||+...
T Consensus       235 -~~~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          235 -ANFCTGIELLVTGGAELG  252 (270)
T ss_dssp             -CTTCCSCEEEESTTTTSC
T ss_pred             -CCCcCCCEEEECCCeecc
Confidence             689999999999998654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=1.2e-44  Score=308.88  Aligned_cols=248  Identities=31%  Similarity=0.465  Sum_probs=210.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..++++|++|||||++|||+++++.|+++|++|++++|+.+.          ..++.++.+|++++++++++++++.+++
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------EAKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            346889999999999999999999999999999999998764          2467789999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus        73 g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  150 (264)
T 2dtx_A           73 GSISVLVNNAGIESY--GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSK  150 (264)
T ss_dssp             SCCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHH
Confidence            999999999998755  778899999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcch-hhhhhh-hhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE-RTEDAM-VGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ++++.|++.++.|++++ |+||+|+||+++|++......... ...... .....+ ... .+.+++++|+|+|+++++|
T Consensus       151 ~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~p~~~~~~p~dvA~~v~~l  227 (264)
T 2dtx_A          151 HAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEW-GHE-HPMQRIGKPQEVASAVAFL  227 (264)
T ss_dssp             HHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHH-HHH-STTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHH-Hhc-CCCCCCcCHHHHHHHHHHH
Confidence            99999999999999998 999999999999998654210000 000000 001111 112 2348899999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccccCc
Q 023553          251 ASDEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      +++...+++|+++.+|||+...-|.
T Consensus       228 ~s~~~~~~tG~~i~vdGG~~~~~p~  252 (264)
T 2dtx_A          228 ASREASFITGTCLYVDGGLSIRAPI  252 (264)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGCCCC
T ss_pred             hCchhcCCCCcEEEECCCcccCCCC
Confidence            9988889999999999998766553

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=6.1e-45  Score=312.40  Aligned_cols=242  Identities=28%  Similarity=0.405  Sum_probs=202.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC--CCCeEEEecCCCCH----HHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG--EPDTFFCHCDVTKE----EDVCSAVDL   87 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~--~~~~~~~~~D~~~~----~~~~~~~~~   87 (280)
                      ++++|++|||||++|||+++|+.|+++|++|++++| +.+.+++..+++..  ..++.++.+|++++    +++.+++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            467999999999999999999999999999999999 87777766665532  24688899999999    999999999


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCH-----------HHHHHHhhhhhhhHHHHHHHHHHhcccCCC------ceE
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADL-----------SEFEKVFDINVKGVFHGMKHAARIMIPQTK------GTI  150 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------g~i  150 (280)
                      +.+.++++|+||||||+...  .++.+.+.           ++|++.+++|+.++++++++++|.|. ++.      ++|
T Consensus        88 ~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~i  164 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYP--TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSV  164 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEE
T ss_pred             HHHhcCCCCEEEECCCCCCC--CCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEE
Confidence            99999999999999998765  67778888           99999999999999999999999997 555      899


Q ss_pred             EEEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh
Q 023553          151 ISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       151 v~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                      |++||..+..+.++...|++||+|+++|++.++.|++++||+||+|+||+++|+  . .... ..       ...+ ...
T Consensus       165 v~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~-~~~~-~~-------~~~~-~~~  232 (276)
T 1mxh_A          165 VNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--P-AMPQ-ET-------QEEY-RRK  232 (276)
T ss_dssp             EEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--S-SSCH-HH-------HHHH-HTT
T ss_pred             EEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--c-cCCH-HH-------HHHH-Hhc
Confidence            999999999999999999999999999999999999999999999999999999  2 1111 00       1111 122


Q ss_pred             ccCCCC-CCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          231 ANMQGT-ELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       231 ~~~~~~-~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                       .+.++ +.+|+|+|+++++|+++...+++|+++.+|||+...
T Consensus       233 -~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  274 (276)
T 1mxh_A          233 -VPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILA  274 (276)
T ss_dssp             -CTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -CCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchhcc
Confidence             23367 899999999999999988889999999999998653

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=4e-45  Score=311.57  Aligned_cols=242  Identities=26%  Similarity=0.368  Sum_probs=201.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.. ..++.++.||+++++++.++++++.+.+|+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999999888887777643 357888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+|
T Consensus        82 iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa  159 (264)
T 3tfo_A           82 IDVLVNNAGVMPL--SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFA  159 (264)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHH
Confidence            9999999999765  78899999999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++|+++++.|+ + ||+||+|+||+++|++............     .       ....+...+|+|+|+++++|++..
T Consensus       160 l~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~-----~-------~~~~~~~~~pedvA~~v~~l~s~~  225 (264)
T 3tfo_A          160 VRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAA-----M-------DTYRAIALQPADIARAVRQVIEAP  225 (264)
T ss_dssp             HHHHHHHHHHHC-S-SEEEEEEEECCC-----------------------------------CCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHH-----H-------HhhhccCCCHHHHHHHHHHHhcCC
Confidence            999999999998 4 9999999999999999765432211100     0       001133579999999999999999


Q ss_pred             CCceeecEEEeCCCccccc
Q 023553          255 ARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~~  273 (280)
                      ..+.+|+++-.++|.....
T Consensus       226 ~~~~~~~i~i~p~~~~~~~  244 (264)
T 3tfo_A          226 QSVDTTEITIRPTASGNAE  244 (264)
T ss_dssp             TTEEEEEEEEEECC-----
T ss_pred             ccCccceEEEecCcccccc
Confidence            9999999999999876544

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=4.4e-44  Score=307.00  Aligned_cols=256  Identities=49%  Similarity=0.786  Sum_probs=219.6

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +..+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++....++.++.+|+++++++.++++++.+
T Consensus         9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   88 (278)
T 2bgk_A            9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIA   88 (278)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            33456899999999999999999999999999999999999887777766665445788999999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC-CCccch
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYT  169 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~-~~~~Y~  169 (280)
                      .++++|++|||||+......++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+ +...|+
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~  168 (278)
T 2bgk_A           89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYT  168 (278)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHH
T ss_pred             HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchH
Confidence            9999999999999875433577889999999999999999999999999999887789999999999998887 788999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||++++.+++.++.|++++||++++|+||++.|++..........      ....+......+.+++.+|+|+|+++++
T Consensus       169 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (278)
T 2bgk_A          169 ATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSS------RVEELAHQAANLKGTLLRAEDVADAVAY  242 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHH------HHHHHHHHTCSSCSCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchh------HHHHhhhcccccccccCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999987654332111      0111222222334789999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccc
Q 023553          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+++...+++|+.+.+|||....
T Consensus       243 l~~~~~~~~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          243 LAGDESKYVSGLNLVIDGGYTRT  265 (278)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HcCcccccCCCCEEEECCccccc
Confidence            99987889999999999998764

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=9.5e-45  Score=309.71  Aligned_cols=243  Identities=28%  Similarity=0.373  Sum_probs=209.2

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |..++.+|++|||||++|||+++|+.|+++|++|++++|+.+.+++..     ...+.++.+|++|++++.++++++.+.
T Consensus        10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (266)
T 3p19_A           10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-----LPNTLCAQVDVTDKYTFDTAITRAEKI   84 (266)
T ss_dssp             -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-----cCCceEEEecCCCHHHHHHHHHHHHHH
Confidence            445688999999999999999999999999999999999977654321     236788999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +|++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.++..+.++...|++|
T Consensus        85 ~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as  162 (266)
T 3p19_A           85 YGPADAIVNNAGMMLL--GQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGT  162 (266)
T ss_dssp             HCSEEEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHH
Confidence            9999999999999765  78899999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++|+++++.|++++||+||+|+||+++|++..........        ..+. ....+.+++++|+|+|+++++|+
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~--------~~~~-~~~~~~~r~~~pedvA~av~~l~  233 (266)
T 3p19_A          163 KFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIK--------DGYD-AWRVDMGGVLAADDVARAVLFAY  233 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHH--------HHHH-HHHHHTTCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhh--------HHHH-hhcccccCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999997765432111        1111 11113388999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcc
Q 023553          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      +....+++++++....+..
T Consensus       234 ~~~~~~~~~~i~i~p~~~~  252 (266)
T 3p19_A          234 QQPQNVCIREIALAPTKQQ  252 (266)
T ss_dssp             HSCTTEEEEEEEEEETTCC
T ss_pred             cCCCCccceeeEEecCCCC
Confidence            9988899999888776654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.6e-45  Score=312.51  Aligned_cols=253  Identities=30%  Similarity=0.415  Sum_probs=202.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh---CC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~---~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+.+   .. ..++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988877776665   32 24688899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCC----CHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc-cccCCCC
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREA----DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGP  165 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~-~~~~~~~  165 (280)
                      ++|++|+||||||+...  .++.+.    +.++|++.+++|+.+++.++++++|.|++++ |+||++||..+ ..+.++.
T Consensus        83 ~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  159 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIP--DSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDF  159 (278)
T ss_dssp             HHSCCCEEEECCC---------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTS
T ss_pred             HcCCCCEEEECCCCCCC--cccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCc
Confidence            99999999999998754  567777    9999999999999999999999999997655 99999999998 8888889


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHH
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|++||+++++|++.++.|++++||+|++|+||+++|++....................+ ... .+.+++++|+|+|+
T Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~-~p~~~~~~~~dvA~  237 (278)
T 1spx_A          160 PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATM-KEC-VPAGVMGQPQDIAE  237 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHH-HHH-CTTSSCBCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHH-Hhc-CCCcCCCCHHHHHH
Confidence            9999999999999999999999999999999999999998654311100000000001111 122 23488999999999


Q ss_pred             HHHHhcCCCCCc-eeecEEEeCCCcccc
Q 023553          246 AVLFLASDEARY-ISGTNLMVDGGFTSV  272 (280)
Q Consensus       246 ~i~~l~s~~~~~-~~G~~i~~dgG~~~~  272 (280)
                      ++++|+++...+ ++|+++.+|||+...
T Consensus       238 ~v~~l~s~~~~~~~tG~~~~vdgG~~~~  265 (278)
T 1spx_A          238 VIAFLADRKTSSYIIGHQLVVDGGSSLI  265 (278)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHcCccccCcccCcEEEECCCcccc
Confidence            999999876666 999999999998653

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.8e-44  Score=310.33  Aligned_cols=243  Identities=30%  Similarity=0.505  Sum_probs=211.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.  .++.++.||++++++++++++++ +.+
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~-~~~  101 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG--NRAEFVSTNVTSEDSVLAAIEAA-NQL  101 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHH-TTS
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHH-HHh
Confidence            467999999999999999999999999999999999999998888887774  46889999999999999999999 788


Q ss_pred             CCccEEEEC-CCCCCCCCCCC-----CCCCHHHHHHHhhhhhhhHHHHHHHHHHhccc------CCCceEEEEccccccc
Q 023553           93 GTLDIMVNN-AGISGAPCPDI-----READLSEFEKVFDINVKGVFHGMKHAARIMIP------QTKGTIISICSVAGAI  160 (280)
Q Consensus        93 g~id~li~~-ag~~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~------~~~g~iv~isS~~~~~  160 (280)
                      +++|++||| ||+...  ..+     .+.+.++|++.+++|+.+++++++.++|.|.+      ++.|+||++||..+..
T Consensus       102 ~~id~lv~~aag~~~~--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  179 (281)
T 3ppi_A          102 GRLRYAVVAHGGFGVA--QRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE  179 (281)
T ss_dssp             SEEEEEEECCCCCCCC--CCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred             CCCCeEEEccCccccc--ccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence            999999999 555433  333     47889999999999999999999999999976      4678999999999999


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCH
Q 023553          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      +.++...|++||+|+++|+++++.|++++||+|++|+||+++|++.....+..         ...+ ....++.+++.+|
T Consensus       180 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---------~~~~-~~~~~~~~~~~~p  249 (281)
T 3ppi_A          180 GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEA---------LAKF-AANIPFPKRLGTP  249 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHH---------HHHH-HHTCCSSSSCBCH
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHH---------HHHH-HhcCCCCCCCCCH
Confidence            99999999999999999999999999999999999999999999976643211         1112 2222333789999


Q ss_pred             HHHHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          241 NDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       241 ~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|+|+++++|++.  .+++|++|.+|||+...
T Consensus       250 edvA~~v~~l~s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          250 DEFADAAAFLLTN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHHHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHHcC--CCcCCcEEEECCCcccC
Confidence            9999999999974  69999999999998764

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-44  Score=304.50  Aligned_cols=232  Identities=25%  Similarity=0.381  Sum_probs=206.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCC--CCHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDV--TKEEDVCSAVDLTV   89 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~--~~~~~~~~~~~~~~   89 (280)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++..  .....++.+|+  ++.+++.++++++.
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999999888877766632  23556666666  99999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+
T Consensus        90 ~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  168 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPR-TPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYG  168 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCCCEEEECCccCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhH
Confidence            9999999999999986432 678899999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      +||+|+++|+++++.|+++ +||+|++|+||+++|++.....+....                   .++.+|+|+|++++
T Consensus       169 ~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~-------------------~~~~~p~dva~~~~  229 (247)
T 3i1j_A          169 VSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDENP-------------------LNNPAPEDIMPVYL  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTSCG-------------------GGSCCGGGGTHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccccCc-------------------cCCCCHHHHHHHHH
Confidence            9999999999999999987 899999999999999987654432110                   34678999999999


Q ss_pred             HhcCCCCCceeecEEEe
Q 023553          249 FLASDEARYISGTNLMV  265 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~  265 (280)
                      ||++++..++||++|.+
T Consensus       230 ~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          230 YLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHSGGGTTCCSCEEEC
T ss_pred             HHhCchhccccCeeecC
Confidence            99999999999999986

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=4.8e-44  Score=308.32  Aligned_cols=247  Identities=23%  Similarity=0.311  Sum_probs=206.4

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++|++|||||+  +|||+++|+.|+++|++|++++|+.+ .++..+.+.. .+.+.++.+|+++++++.++++++.+.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4899999999999  99999999999999999999999875 2222222211 123678899999999999999999999


Q ss_pred             hCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           92 FGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      ++++|+||||||+....  ..++.+.+.++|++.+++|+.++++++++++|.|.++ .|+||++||..+..+.++...|+
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  175 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMG  175 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHH
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHH
Confidence            99999999999986420  1457789999999999999999999999999999654 59999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|++.++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|+++++
T Consensus       176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~-~p~~~~~~~~dva~~~~~  246 (285)
T 2p91_A          176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHL--------LMEHTTKV-NPFGKPITIEDVGDTAVF  246 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHH--------HHHHHHHH-STTSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHH--------HHHHHHhc-CCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999998654221110        11111122 234789999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccc
Q 023553          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+++...+++|+++.+|||+...
T Consensus       247 l~s~~~~~~tG~~~~vdgg~~~~  269 (285)
T 2p91_A          247 LCSDWARAITGEVVHVDNGYHIM  269 (285)
T ss_dssp             HTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HcCCcccCCCCCEEEECCCcccc
Confidence            99988889999999999998764

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.1e-44  Score=310.30  Aligned_cols=243  Identities=28%  Similarity=0.397  Sum_probs=202.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++|++|||||++|||+++|++|+++|++|+++ .|+.+..++..+.+.. ..++.++.+|++++++++++++++.+.++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999999887 6777766666655533 35788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC---CCceEEEEccccccccCC-CCccch
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ---TKGTIISICSVAGAIGGL-GPHAYT  169 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~g~iv~isS~~~~~~~~-~~~~Y~  169 (280)
                      ++|+||||||+.... .++.+.+.++|++++++|+.+++.+++.++|.|.+.   +.|+||++||.++..+.+ +...|+
T Consensus       104 ~id~li~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  182 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYP-QRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA  182 (272)
T ss_dssp             CCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHH
T ss_pred             CCCEEEECCCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhH
Confidence            999999999987542 678899999999999999999999999999999763   468999999999988776 667899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|+++++.|++++||+|++|+||+++|++........         ...... ...+.+++.+|+|+|+++++
T Consensus       183 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~edvA~~i~~  252 (272)
T 4e3z_A          183 ASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPD---------RAREMA-PSVPMQRAGMPEEVADAILY  252 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------------------CCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChH---------HHHHHh-hcCCcCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999865521111         001111 12234788999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCc
Q 023553          250 LASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~  269 (280)
                      |+++...+++|++|.+|||+
T Consensus       253 l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          253 LLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCCccccccCCEEeecCCC
Confidence            99988899999999999995

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=4.1e-45  Score=308.11  Aligned_cols=240  Identities=27%  Similarity=0.352  Sum_probs=201.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .++|++|||||++|||+++|+.|++ .|+.|++.+|+.+..         ...+.++.+|+++++++.++++.+.  +++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~   70 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------AENLKFIKADLTKQQDITNVLDIIK--NVS   70 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------CTTEEEEECCTTCHHHHHHHHHHTT--TCC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------cccceEEecCcCCHHHHHHHHHHHH--hCC
Confidence            4689999999999999999999999 789999999886521         1356789999999999999996554  689


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++++++|+.++++++++++|.|++.  |+||++||..+..+.++...|++||+|
T Consensus        71 id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa  146 (244)
T 4e4y_A           71 FDGIFLNAGILIK--GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGA  146 (244)
T ss_dssp             EEEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHH
T ss_pred             CCEEEECCccCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHH
Confidence            9999999999865  788999999999999999999999999999999653  899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhh-hhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +++|+++++.|++++||+||+|+||+++|++............. ........... ..+.+++.+|+|+|+++++|+++
T Consensus       147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~p~dvA~~v~~l~s~  225 (244)
T 4e4y_A          147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEK-EFPLNRIAQPQEIAELVIFLLSD  225 (244)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHT-TSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhh-cCCCCCCcCHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999987654221110000 00001111122 23458999999999999999999


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...++||+++.+|||+..
T Consensus       226 ~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          226 KSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             ccccccCCeEeECCCccC
Confidence            889999999999999864

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=3.2e-44  Score=307.87  Aligned_cols=248  Identities=19%  Similarity=0.233  Sum_probs=208.3

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++|++|||||+  +|||+++|+.|+++|++|++++|+.+ .++..+.+.. .+.+.++.+|+++++++.++++++.+.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999876 2222222211 123678899999999999999999999


Q ss_pred             hCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           92 FGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      ++++|+||||||+....  ..++.+.+.++|++++++|+.+++.++++++|.|++  .|+||++||..+..+.++...|+
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  159 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMG  159 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHHH
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhhH
Confidence            99999999999986420  146778999999999999999999999999999964  58999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|++.++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|+++++
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~p~~~~~~p~dva~~~~~  230 (275)
T 2pd4_A          160 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRM--------ILKWNEIN-APLRKNVSLEEVGNAGMY  230 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHH--------HHHHHHHH-STTSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHH--------HHHHHHhc-CCcCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999998654321110        11111122 234789999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccccC
Q 023553          250 LASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      |+++...+++|+++.+|||+...+.
T Consensus       231 l~s~~~~~~tG~~~~vdgg~~~~~~  255 (275)
T 2pd4_A          231 LLSSLSSGVSGEVHFVDAGYHVMGM  255 (275)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGBSS
T ss_pred             HhCccccCCCCCEEEECCCcccCCC
Confidence            9998888999999999999876543

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.4e-45  Score=307.32  Aligned_cols=242  Identities=30%  Similarity=0.503  Sum_probs=203.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.+.+++.. ++   .++.++.+|+++++++.    ++.+.+++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~---~~~~~~~~D~~~~~~~~----~~~~~~~~   74 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY---PGIQTRVLDVTKKKQID----QFANEVER   74 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS---TTEEEEECCTTCHHHHH----HHHHHCSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc---cCceEEEeeCCCHHHHH----HHHHHhCC
Confidence            478999999999999999999999999999999999987655443 22   26788999999999987    44556789


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC-CCccchhhHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~-~~~~Y~~sK~  173 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.+ +...|++||+
T Consensus        75 id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~  152 (246)
T 2ag5_A           75 LDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKA  152 (246)
T ss_dssp             CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred             CCEEEECCccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHH
Confidence            9999999998765  678889999999999999999999999999999877789999999999988877 8899999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +++.|++.++.|++++||+|++|+||+++|++............   .....+. .. .+.+++.+|+|+|+++++|+++
T Consensus       153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~~-~~-~~~~~~~~~~dvA~~v~~l~s~  227 (246)
T 2ag5_A          153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPE---EARNDFL-KR-QKTGRFATAEEIAMLCVYLASD  227 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHH---HHHHHHH-HT-CTTSSCEEHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcH---HHHHHHH-hc-CCCCCCCCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999998643211000000   0111121 22 2348899999999999999998


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+++.+|||+..
T Consensus       228 ~~~~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          228 ESAYVTGNPVIIDGGWSL  245 (246)
T ss_dssp             GGTTCCSCEEEECTTGGG
T ss_pred             cccCCCCCEEEECCCccC
Confidence            888999999999999753

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=2.6e-44  Score=306.86  Aligned_cols=247  Identities=20%  Similarity=0.235  Sum_probs=205.7

Q ss_pred             cccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .++++|++|||||+  +|||+++|+.|+++|++|++++|+. ..++..+++.. .+...++.+|+++++++.++++++.+
T Consensus         5 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            5 GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHH
Confidence            34889999999999  9999999999999999999999987 22222222211 12346789999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCC--CCCCCC-CCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023553           91 KFGTLDIMVNNAGISGAP--CPDIRE-ADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~  167 (280)
                      +++++|+||||||+....  ..++.+ .+.++|++.+++|+.++++++++++|.|.+  .|+||++||..+..+.++...
T Consensus        84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  161 (265)
T 1qsg_A           84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNV  161 (265)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTH
T ss_pred             HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchH
Confidence            999999999999986420  145667 899999999999999999999999999964  589999999999999899999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |++||+|++.|++.++.|++++||+|++|+||+++|++.........        ......... +.+++.+|+|+|+++
T Consensus       162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~~-p~~~~~~~~dva~~v  232 (265)
T 1qsg_A          162 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRK--------MLAHCEAVT-PIRRTVTIEDVGNSA  232 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHH--------HHHHHHHHS-TTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHH--------HHHHHHhcC-CCCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999998654321110        111111222 348899999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCcccc
Q 023553          248 LFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++|+++...+++|+++.+|||+...
T Consensus       233 ~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          233 AFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHhCchhcCccCCEEEECCCcCCC
Confidence            9999988889999999999998765

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.2e-44  Score=308.40  Aligned_cols=236  Identities=24%  Similarity=0.309  Sum_probs=190.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.++.+|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.  .++.++.||++|+++++++++++.+++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~  100 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG--DDALCVPTDVTDPDSVRALFTATVEKF  100 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT--SCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            456899999999999999999999999999999999999998888887775  467889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC--CceEEEEccccccccCCCCccchh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      |++|+||||||+.... .++.+.+.++|++.+++|+.++++++++++|.|++++  .|+||++||..+..+.++...|++
T Consensus       101 g~iD~lVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a  179 (272)
T 4dyv_A          101 GRVDVLFNNAGTGAPA-IPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTA  179 (272)
T ss_dssp             SCCCEEEECCCCCCCS-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHH
Confidence            9999999999986432 6788999999999999999999999999999998765  689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.+.........            ....+.+++.+|+|+|++++||
T Consensus       180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~------------~~~~~~~~~~~pedvA~~v~fL  247 (272)
T 4dyv_A          180 TKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQA------------DLSIKVEPVMDVAHVASAVVYM  247 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------------------CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhh------------hhcccccCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999976543221110            0112236789999999999999


Q ss_pred             cCCCCCceeecEE
Q 023553          251 ASDEARYISGTNL  263 (280)
Q Consensus       251 ~s~~~~~~~G~~i  263 (280)
                      ++.......++..
T Consensus       248 ~s~~~~~~~~~i~  260 (272)
T 4dyv_A          248 ASLPLDANVQFMT  260 (272)
T ss_dssp             HHSCTTSCCCEEE
T ss_pred             hCCCCcCccceEE
Confidence            9965554444433

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=2.8e-44  Score=302.14  Aligned_cols=235  Identities=30%  Similarity=0.414  Sum_probs=204.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +|+++||||++|||+++++.|+++|++|++++|+.+...   +++.    +.++.+|+++ +++.++++++.+.++++|+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~---~~~~----~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAA---QSLG----AVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH---HHHT----CEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HhhC----cEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            689999999999999999999999999999999977632   3331    6778999999 9999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC--CCCccchhhHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--LGPHAYTGSKHAV  175 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~--~~~~~Y~~sK~al  175 (280)
                      +|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.  ++...|++||+++
T Consensus        74 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~  151 (239)
T 2ekp_A           74 LVHAAAVNVR--KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL  151 (239)
T ss_dssp             EEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHH
Confidence            9999998755  77889999999999999999999999999999987778999999999998887  8889999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      +.|++.++.|++++||+|++|+||+++|++.......+       .....+ .. ..+.+++.+|+|+|+++++|+++..
T Consensus       152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-------~~~~~~-~~-~~p~~~~~~~~dvA~~~~~l~s~~~  222 (239)
T 2ekp_A          152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNP-------ELYEPI-TA-RIPMGRWARPEEIARVAAVLCGDEA  222 (239)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCH-------HHHHHH-HT-TCTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCH-------HHHHHH-Hh-cCCCCCCcCHHHHHHHHHHHcCchh
Confidence            99999999999999999999999999999865321100       001111 12 2234889999999999999999888


Q ss_pred             CceeecEEEeCCCccc
Q 023553          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      .+++|+.+.+|||+..
T Consensus       223 ~~~tG~~~~vdgG~~~  238 (239)
T 2ekp_A          223 EYLTGQAVAVDGGFLA  238 (239)
T ss_dssp             TTCCSCEEEESTTTTT
T ss_pred             cCCCCCEEEECCCccc
Confidence            8999999999999753

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=3.5e-45  Score=321.65  Aligned_cols=254  Identities=19%  Similarity=0.212  Sum_probs=207.0

Q ss_pred             CCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCc---------chHHHHHHHhCC----CCCeEEEecCCCCH--H
Q 023553           17 VGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQD---------NLGQQVCQSLGG----EPDTFFCHCDVTKE--E   79 (280)
Q Consensus        17 ~~k~vlItGas~--giG~~ia~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~----~~~~~~~~~D~~~~--~   79 (280)
                      ++|++|||||++  |||+++|++|+++|++|+++++++         +..+...+....    ...+.++.||+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  999999999999999999777654         222222222221    13467788999888  7


Q ss_pred             ------------------HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHh
Q 023553           80 ------------------DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI  141 (280)
Q Consensus        80 ------------------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  141 (280)
                                        ++.++++++.++++++|+||||||+......++.+.+.++|++++++|+.+++.++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999985433378999999999999999999999999999999


Q ss_pred             cccCCCceEEEEccccccccCCCCc-cchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCceeccccccCCCcchh----
Q 023553          142 MIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEEER----  215 (280)
Q Consensus       142 l~~~~~g~iv~isS~~~~~~~~~~~-~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~~~----  215 (280)
                      |+++  |+||++||..+..+.++.. .|++||+|+.+|+++|+.|+++ +||+||+|+||+++|++..........    
T Consensus       161 m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  238 (329)
T 3lt0_A          161 MKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN  238 (329)
T ss_dssp             EEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC---------
T ss_pred             HhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccccc
Confidence            9764  9999999999999999986 9999999999999999999998 899999999999999998765321100    


Q ss_pred             ---------------------hh----------hhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEE
Q 023553          216 ---------------------TE----------DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLM  264 (280)
Q Consensus       216 ---------------------~~----------~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~  264 (280)
                                           ..          ...+......... .+.+++.+|+|+|++++||+|+.+.++||++|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~  317 (329)
T 3lt0_A          239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKY-APLRQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ---------------------------------CHHHHHHHHHHHH-SSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             ccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhc-CcccCcCCHHHHHHHHHHHhCchhccccCcEEE
Confidence                                 00          0000112222223 344999999999999999999999999999999


Q ss_pred             eCCCccccc
Q 023553          265 VDGGFTSVN  273 (280)
Q Consensus       265 ~dgG~~~~~  273 (280)
                      +|||++.+.
T Consensus       318 vdGG~~~~~  326 (329)
T 3lt0_A          318 VDNGLNIMF  326 (329)
T ss_dssp             ESTTGGGCS
T ss_pred             EcCCeeEEe
Confidence            999998854

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=4.6e-44  Score=304.83  Aligned_cols=236  Identities=25%  Similarity=0.348  Sum_probs=203.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..++.++.+|+++++++.++++++.+.
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA  103 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            4568999999999999999999999999999999999999888877776643 357888999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|+||||||+.... .++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus       104 ~g~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  182 (262)
T 3rkr_A          104 HGRCDVLVNNAGVGWFG-GPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTAS  182 (262)
T ss_dssp             HSCCSEEEECCCCCCCS-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCccCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHH
Confidence            99999999999984332 67889999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++|+++++.|++++||+|++|+||+++|++........                   ...++++|+|+|+++++|+
T Consensus       183 Kaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-------------------~~~~~~~p~dvA~~v~~l~  243 (262)
T 3rkr_A          183 KWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAKK-------------------SALGAIEPDDIADVVALLA  243 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------------CCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccccc-------------------ccccCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999865432210                   1156789999999999999


Q ss_pred             CCCCCceeecEEEeCCC
Q 023553          252 SDEARYISGTNLMVDGG  268 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG  268 (280)
                      ++...+++|+++..+.|
T Consensus       244 s~~~~~~~g~~~i~p~~  260 (262)
T 3rkr_A          244 TQADQSFISEVLVRPTL  260 (262)
T ss_dssp             TCCTTCCEEEEEEECCC
T ss_pred             cCccccccCcEEecccc
Confidence            99899999999988765

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.4e-43  Score=299.44  Aligned_cols=245  Identities=32%  Similarity=0.498  Sum_probs=215.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..+.+....++.++.+|+++++++.++++.+.+.+++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999999998887777777654467889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCC-ceEEEEccccccccCCCCccchhhHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|++++. ++||++||..+..+.++...|++||+
T Consensus        83 id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (251)
T 1zk4_A           83 VSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHH
Confidence            9999999998754  67888999999999999999999999999999987766 89999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHC--CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          174 AVLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       174 al~~~~~~la~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      +++.+++.++.|+.  ++||++++|+||+++|++....... .        ....... ..+.+++.+|+|+|+++++|+
T Consensus       161 a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~--------~~~~~~~-~~~~~~~~~~~dva~~~~~l~  230 (251)
T 1zk4_A          161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA-E--------EAMSQRT-KTPMGHIGEPNDIAYICVYLA  230 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTH-H--------HHHTSTT-TCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCch-h--------hhHHHhh-cCCCCCCcCHHHHHHHHHHHc
Confidence            99999999999988  8899999999999999987653211 0        0010111 223478999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+.+.+|||+..
T Consensus       231 ~~~~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          231 SNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CcccccccCcEEEECCCccC
Confidence            98788999999999999853

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-44  Score=307.50  Aligned_cols=246  Identities=27%  Similarity=0.418  Sum_probs=211.9

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..+++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+.+.. ..++.++.+|++|+++++++++++.+
T Consensus        38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  117 (285)
T 2c07_A           38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT  117 (285)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999998877776666643 35788899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++
T Consensus       118 ~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a  195 (285)
T 2c07_A          118 EHKNVDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSS  195 (285)
T ss_dssp             HCSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             hcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHH
Confidence            99999999999998755  6788999999999999999999999999999998777799999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||++++.|++.++.|+++.||+|++|+||+++|++.....+.          ........ .+.+++.+|+|+|+++++|
T Consensus       196 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~dvA~~~~~l  264 (285)
T 2c07_A          196 SKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ----------IKKNIISN-IPAGRMGTPEEVANLACFL  264 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH----------HHHHHHTT-CTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHH----------HHHHHHhh-CCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999986543210          11111112 2347899999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcc
Q 023553          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++...+++|+++.+|||+.
T Consensus       265 ~~~~~~~~~G~~i~v~gG~~  284 (285)
T 2c07_A          265 SSDKSGYINGRVFVIDGGLS  284 (285)
T ss_dssp             HSGGGTTCCSCEEEESTTSC
T ss_pred             hCCCcCCCCCCEEEeCCCcc
Confidence            99888899999999999975

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.9e-43  Score=298.56  Aligned_cols=237  Identities=27%  Similarity=0.397  Sum_probs=204.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.. ..++.++.+|++++++++++++++.+.++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999998887776666532 34688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++ |+||++||..+..+.++...|++||+
T Consensus        84 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~  160 (247)
T 2jah_A           84 GLDILVNNAGIMLL--GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKF  160 (247)
T ss_dssp             CCSEEEECCCCCCC--CCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHH
Confidence            99999999998754  7788999999999999999999999999999997766 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCC--CCHHHHHHHHHHhc
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVANAVLFLA  251 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dva~~i~~l~  251 (280)
                      |+++|+++++.|++++||+||+|+||+++|++....... ..        .......  + +++  ++|+|+|+++++|+
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~--------~~~~~~~--~-~~~~~~~pedvA~~v~~l~  228 (247)
T 2jah_A          161 GVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHT-AT--------KEMYEQR--I-SQIRKLQAQDIAEAVRYAV  228 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCH-HH--------HHHHHHH--T-TTSCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccch-hh--------HHHHHhc--c-cccCCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999987543221 10        0111111  1 344  89999999999999


Q ss_pred             CCCCCceeecEEEeCC
Q 023553          252 SDEARYISGTNLMVDG  267 (280)
Q Consensus       252 s~~~~~~~G~~i~~dg  267 (280)
                      ++...+++++. .+++
T Consensus       229 s~~~~~~~~~i-~i~~  243 (247)
T 2jah_A          229 TAPHHATVHEI-FIRP  243 (247)
T ss_dssp             HSCTTEEEEEE-EEEE
T ss_pred             CCCccCccceE-EecC
Confidence            98888888774 4543

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.9e-43  Score=301.04  Aligned_cols=245  Identities=31%  Similarity=0.473  Sum_probs=207.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.  .++.++.+|+++++++.++++++.++++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG--NNCVFAPADVTSEKDVQTALALAKGKFG   85 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            45889999999999999999999999999999999999888887777663  4688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCC------CCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC------CCceEEEEcccccccc
Q 023553           94 TLDIMVNNAGISGAPCPDIR------EADLSEFEKVFDINVKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIG  161 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~g~iv~isS~~~~~~  161 (280)
                      ++|+||||||+...  .++.      +.+.++|++.+++|+.+++.++++++|.|+++      +.++||++||..+..+
T Consensus        86 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  163 (265)
T 2o23_A           86 RVDVAVNCAGIAVA--SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  163 (265)
T ss_dssp             CCCEEEECCCCCCC--CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             CCCEEEECCccCCC--CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC
Confidence            99999999998754  3333      37899999999999999999999999999876      6789999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHH
Q 023553          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      .++...|++||+|++.|++.++.|++++||+|++|+||+++|++.......          .........+..+++.+|+
T Consensus       164 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~  233 (265)
T 2o23_A          164 QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK----------VCNFLASQVPFPSRLGDPA  233 (265)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------------CHHHHTCSSSCSCBCHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH----------HHHHHHHcCCCcCCCCCHH
Confidence            999999999999999999999999999999999999999999986543111          0011111122227889999


Q ss_pred             HHHHHHHHhcCCCCCceeecEEEeCCCcccccC
Q 023553          242 DVANAVLFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       242 dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      |+|+++++|++  +.+++|+.+.+|||+....+
T Consensus       234 dva~~~~~l~~--~~~~~G~~i~vdgG~~~~~~  264 (265)
T 2o23_A          234 EYAHLVQAIIE--NPFLNGEVIRLDGAIRMQPG  264 (265)
T ss_dssp             HHHHHHHHHHH--CTTCCSCEEEESTTCCCCCC
T ss_pred             HHHHHHHHHhh--cCccCceEEEECCCEecCCC
Confidence            99999999995  46899999999999876544

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=4e-44  Score=308.18  Aligned_cols=245  Identities=24%  Similarity=0.339  Sum_probs=200.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..  ...+.++.||++|++++.++++++.+.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999999999999999888777666532  123588999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC--CceEEEEccccccccCCCCccch
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +|++|+||||||+.... .++.+.+.++|++++++|+.+++.++++++|.|++++  .|+||++||..+..+.++...|+
T Consensus       109 ~g~iD~lvnnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  187 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPP-VPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYT  187 (281)
T ss_dssp             HSCCSEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHH
Confidence            99999999999986432 6788999999999999999999999999999998765  68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+++|+++++.|++++||+||+|+||+++|++...........            ....+.+++.+|+|+|++++|
T Consensus       188 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~------------~~~~~~~~~~~pedvA~~v~f  255 (281)
T 4dry_A          188 ATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQA------------NGEVAAEPTIPIEHIAEAVVY  255 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECT------------TSCEEECCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhh------------hhcccccCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999976653321110            011123678999999999999


Q ss_pred             hcCCCCC-ceeecEEEeCCCccc
Q 023553          250 LASDEAR-YISGTNLMVDGGFTS  271 (280)
Q Consensus       250 l~s~~~~-~~~G~~i~~dgG~~~  271 (280)
                      |++.... .+++.++.-....+.
T Consensus       256 L~s~~~~~~i~~~~i~p~~~~~~  278 (281)
T 4dry_A          256 MASLPLSANVLTMTVMATRMPLV  278 (281)
T ss_dssp             HHHSCTTEEEEEEEEEETTSSCS
T ss_pred             HhCCCccCccccEEEEecccccc
Confidence            9995444 566766666655443

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=9.6e-44  Score=298.20  Aligned_cols=226  Identities=18%  Similarity=0.177  Sum_probs=193.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..  .+.++.+|++++++++++++++.+.++++|
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   79 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN--AVIGIVADLAHHEDVDVAFAAAVEWGGLPE   79 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG--GEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            479999999999999999999999999999999999988887777742  588899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|++++ ++||++||..+..+.++...|++||+|++
T Consensus        80 ~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~  156 (235)
T 3l6e_A           80 LVLHCAGTGEF--GPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMR  156 (235)
T ss_dssp             EEEEECCCC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHH
Confidence            99999999755  7888999999999999999999999999999997655 59999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC-CCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS-DEA  255 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s-~~~  255 (280)
                      +|+++++.|++++||+|++|+||+++|++.......                    ...++.+|+|+|++++++++ +..
T Consensus       157 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--------------------~~~~~~~pedvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          157 GFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHV--------------------DPSGFMTPEDAAAYMLDALEARSS  216 (235)
T ss_dssp             HHHHHHHHHTTTSSEEEEEEEEEEECCCC-------------------------------CBCHHHHHHHHHHHTCCCSS
T ss_pred             HHHHHHHHHhhccCCEEEEEeCCCccCcchhccCCC--------------------CCcCCCCHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999999986543211                    01478899999999999998 556


Q ss_pred             CceeecEEEeCC
Q 023553          256 RYISGTNLMVDG  267 (280)
Q Consensus       256 ~~~~G~~i~~dg  267 (280)
                      .+++|-.+.-..
T Consensus       217 ~~i~~i~~~~~~  228 (235)
T 3l6e_A          217 CHVTDLFIGRNE  228 (235)
T ss_dssp             EEEEEEEEEECC
T ss_pred             cceeeEEEecCC
Confidence            678887665444

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.1e-43  Score=301.89  Aligned_cols=249  Identities=31%  Similarity=0.455  Sum_probs=213.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.++++|++|||||++|||++++++|+++|++|++++| +.+..++..+.+.. ..++.++.+|+++++++.++++++.+
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999 76666665555432 34678899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccch
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|+
T Consensus        82 ~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  159 (261)
T 1gee_A           82 EFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA  159 (261)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHH
Confidence            99999999999998754  6778899999999999999999999999999998776 78999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|++.+++.++.+++++||++++|+||+++|++.........       ....+ ... .+.+++.+|+|+|+++++
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-------~~~~~-~~~-~~~~~~~~~~dva~~~~~  230 (261)
T 1gee_A          160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPE-------QRADV-ESM-IPMGYIGEPEEIAAVAAW  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHH-------HHHHH-HTT-CTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChh-------HHHHH-Hhc-CCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999998654211100       01111 112 234789999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccc
Q 023553          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+++...+++|+++.+|||+...
T Consensus       231 l~~~~~~~~~G~~~~v~gg~~~~  253 (261)
T 1gee_A          231 LASSEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhCccccCCCCcEEEEcCCcccC
Confidence            99987789999999999998653

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=5.2e-44  Score=304.89  Aligned_cols=253  Identities=26%  Similarity=0.347  Sum_probs=194.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.. ..++.++.+|++++++++++++++.+.
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            3568899999999999999999999999999999999998877766655532 346888999999999999999999999


Q ss_pred             h-CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           92 F-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      + +++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++
T Consensus        89 ~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  166 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSA  166 (266)
T ss_dssp             HTTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHH
T ss_pred             hCCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHH
Confidence            9 899999999998754  6788899999999999999999999999999998777899999999999988888999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||++++.|++.++.+++++||++++|+||++.|++....... ..       ...+ ... .+.+++++|+|+|+++++|
T Consensus       167 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~-------~~~~-~~~-~~~~~~~~~~dva~~~~~l  236 (266)
T 1xq1_A          167 TKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD-EF-------KKVV-ISR-KPLGRFGEPEEVSSLVAFL  236 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------------CCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCH-HH-------HHHH-Hhc-CCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999987543211 00       0011 111 2237889999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccccCccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      +++...+++|+++.+|||+...+-.++
T Consensus       237 ~~~~~~~~~G~~~~v~gG~~~~~~~~~  263 (266)
T 1xq1_A          237 CMPAASYITGQTICVDGGLTVNGFSYQ  263 (266)
T ss_dssp             TSGGGTTCCSCEEECCCCEEETTEEEC
T ss_pred             cCccccCccCcEEEEcCCccccccCCC
Confidence            998888999999999999887654443

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3.8e-43  Score=296.69  Aligned_cols=244  Identities=35%  Similarity=0.549  Sum_probs=211.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh-CC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL-GG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ .. ..++.++.+|++++++++++++++.+++++
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            3789999999999999999999999999999999988877776666 32 246888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCC---CCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           95 LDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        95 id~li~~ag~~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +|++|||||+...  .+   +.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++|
T Consensus        81 id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  158 (250)
T 2cfc_A           81 IDVLVNNAGITGN--SEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTS  158 (250)
T ss_dssp             CCEEEECCCCCCC--TTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHH
Confidence            9999999998754  44   788899999999999999999999999999987778999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++.|++.++.|++++||++++++||+++|++........        .+....... .+.+++.+|+|+|+++++|+
T Consensus       159 K~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~~~dva~~~~~l~  229 (250)
T 2cfc_A          159 KGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQP--------ELRDQVLAR-IPQKEIGTAAQVADAVMFLA  229 (250)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSH--------HHHHHHHTT-CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCH--------HHHHHHHhc-CCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999865421111        011111122 23478999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+++.+|||+..
T Consensus       230 ~~~~~~~~G~~~~v~gG~~~  249 (250)
T 2cfc_A          230 GEDATYVNGAALVMDGAYTA  249 (250)
T ss_dssp             STTCTTCCSCEEEESTTGGG
T ss_pred             CchhhcccCCEEEECCceec
Confidence            98888999999999999753

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=3e-43  Score=298.04  Aligned_cols=245  Identities=33%  Similarity=0.469  Sum_probs=212.1

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCe-EEEecCCCCHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT-FFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.  .++ .++.+|+++++++.++++++.+
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG--AAVAARIVADVTDAEAMTAAAAEAEA   82 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--ccceeEEEEecCCHHHHHHHHHHHHh
Confidence            3456899999999999999999999999999999999999887777666653  345 7889999999999999999988


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC--ccc
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP--HAY  168 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~--~~Y  168 (280)
                       ++++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+..  ..|
T Consensus        83 -~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  159 (254)
T 2wsb_A           83 -VAPVSILVNSAGIARL--HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSY  159 (254)
T ss_dssp             -HSCCCEEEECCCCCCC--BCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHH
T ss_pred             -hCCCcEEEECCccCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHH
Confidence             8999999999998765  67888999999999999999999999999999988778999999999998887777  899


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||++++.+++.++.+++++||++++|+||+++|++........       .....+. +. .+.+++.+|+|+|++++
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-------~~~~~~~-~~-~~~~~~~~~~dva~~~~  230 (254)
T 2wsb_A          160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERP-------ELFETWL-DM-TPMGRCGEPSEIAAAAL  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCH-------HHHHHHH-HT-STTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccCh-------HHHHHHH-hc-CCCCCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999865421110       0011121 22 23478999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCcc
Q 023553          249 FLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +|+++...+++|+++.+|||+.
T Consensus       231 ~l~~~~~~~~~G~~~~v~gG~~  252 (254)
T 2wsb_A          231 FLASPAASYVTGAILAVDGGYT  252 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhCcccccccCCEEEECCCEe
Confidence            9999878899999999999975

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-43  Score=301.43  Aligned_cols=248  Identities=27%  Similarity=0.385  Sum_probs=210.2

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHH
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      ++..+++++|++|||||++|||++++++|+++|++|++++|+.+...+..+.+..  ..++.++.+|+++++++++++++
T Consensus         6 ~~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~   85 (265)
T 1h5q_A            6 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ   85 (265)
T ss_dssp             CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHH
Confidence            3445678999999999999999999999999999999999976655444433321  24688899999999999999999


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCC--
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLG--  164 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~--  164 (280)
                      +.+.++++|++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.+.  
T Consensus        86 ~~~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  163 (265)
T 1h5q_A           86 IDADLGPISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL  163 (265)
T ss_dssp             HHHHSCSEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET
T ss_pred             HHHhcCCCCEEEECCCcCCC--CchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccc
Confidence            99999999999999998765  6788899999999999999999999999999997655 489999999988766542  


Q ss_pred             -----CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCC
Q 023553          165 -----PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT  239 (280)
Q Consensus       165 -----~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (280)
                           ...|++||++++.|++.++.|++++||++++|+||+++|++.....+.          ....... ..+.+++.+
T Consensus       164 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~-~~~~~~~~~  232 (265)
T 1h5q_A          164 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK----------IRDHQAS-NIPLNRFAQ  232 (265)
T ss_dssp             TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH----------HHHHHHH-TCTTSSCBC
T ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchh----------HHHHHHh-cCcccCCCC
Confidence                 678999999999999999999999999999999999999987654211          1111111 223478999


Q ss_pred             HHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          240 ANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       240 ~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+|+|+++++|+++...+++|+.+.+|||+.
T Consensus       233 ~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          233 PEEMTGQAILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             GGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence            9999999999999888899999999999975

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.6e-43  Score=322.69  Aligned_cols=243  Identities=26%  Similarity=0.337  Sum_probs=206.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc--hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN--LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ...+++|++|||||++|||+++|++|+++|++|++++|+..  .+++..+..    .+.++.||++++++++++++++.+
T Consensus       208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~----~~~~~~~Dvtd~~~v~~~~~~~~~  283 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV----GGTALTLDVTADDAVDKITAHVTE  283 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH----TCEEEECCTTSTTHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999998743  333333333    346789999999999999999999


Q ss_pred             HhCC-ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           91 KFGT-LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~g~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      ++++ +|++|||||+...  ..+.+.+.++|++++++|+.+++++.++++|.|++++.++||++||.++..+.+++..|+
T Consensus       284 ~~g~~id~lV~nAGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~Ya  361 (454)
T 3u0b_A          284 HHGGKVDILVNNAGITRD--KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYA  361 (454)
T ss_dssp             HSTTCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHH
T ss_pred             HcCCCceEEEECCcccCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHH
Confidence            9976 9999999999876  789999999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+++++|+++++.|++++||+||+|+||+++|++.........          ....+ ..+.+++.+|+|+|++++|
T Consensus       362 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~----------~~~~~-~~~l~r~g~pedvA~~v~f  430 (454)
T 3u0b_A          362 TTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATR----------EVGRR-LNSLFQGGQPVDVAELIAY  430 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------C----------HHHHH-SBTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhH----------HHHHh-hccccCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999765422111          11112 2234788999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccc
Q 023553          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+++.+.++||++|.+|||...+
T Consensus       431 L~s~~a~~itG~~i~vdGG~~lG  453 (454)
T 3u0b_A          431 FASPASNAVTGNTIRVCGQAMLG  453 (454)
T ss_dssp             HHCGGGTTCCSCEEEESSSBSCC
T ss_pred             HhCCccCCCCCcEEEECCccccc
Confidence            99999999999999999998753

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=2e-43  Score=297.90  Aligned_cols=244  Identities=29%  Similarity=0.452  Sum_probs=212.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+.+..  ..++.++.+|++++++++++++++.+
T Consensus         2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999998877766555432  34688899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||....  .++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++
T Consensus        82 ~~~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  159 (248)
T 2pnf_A           82 LVDGIDILVNNAGITRD--KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYST  159 (248)
T ss_dssp             HSSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             hcCCCCEEEECCCCCCC--CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHH
Confidence            99999999999998755  6778899999999999999999999999999998777899999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|++++.+++.++.|++++||++++++||+++|++...... .         ........ .+.+++.+|+|+|++++++
T Consensus       160 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~-~---------~~~~~~~~-~~~~~~~~~~dva~~~~~l  228 (248)
T 2pnf_A          160 TKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSE-E---------IKQKYKEQ-IPLGRFGSPEEVANVVLFL  228 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH-H---------HHHHHHHT-CTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccH-H---------HHHHHHhc-CCCCCccCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998754211 0         11111111 2337899999999999999


Q ss_pred             cCCCCCceeecEEEeCCCc
Q 023553          251 ASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~  269 (280)
                      +++...+++|+++.+|||+
T Consensus       229 ~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          229 CSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HSGGGTTCCSCEEEESTTC
T ss_pred             hCchhhcCCCcEEEeCCCc
Confidence            9877789999999999996

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.3e-43  Score=300.40  Aligned_cols=247  Identities=30%  Similarity=0.471  Sum_probs=208.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--------CCeEEEecCCCCHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--------PDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~   84 (280)
                      +.++++|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+...        .++.++.+|+++++++.++
T Consensus         2 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (264)
T 2pd6_A            2 QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL   81 (264)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence            34578999999999999999999999999999999999988877766655321        4678899999999999999


Q ss_pred             HHHHHHHhCCc-cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccC
Q 023553           85 VDLTVEKFGTL-DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGG  162 (280)
Q Consensus        85 ~~~~~~~~g~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~  162 (280)
                      ++.+.+.++++ |+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.
T Consensus        82 ~~~~~~~~g~i~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  159 (264)
T 2pd6_A           82 LEQVQACFSRPPSVVVSCAGITQD--EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN  159 (264)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC
T ss_pred             HHHHHHHhCCCCeEEEECCCcCCC--cchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC
Confidence            99999999999 999999998755  6788899999999999999999999999999997766 6899999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHH
Q 023553          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      ++...|++||++++.|++.++.+++++||++++|+||+++|++.....+..         ...+ ... .+.+++.+|+|
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---------~~~~-~~~-~~~~~~~~~~d  228 (264)
T 2pd6_A          160 VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKV---------VDKI-TEM-IPMGHLGDPED  228 (264)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------------CT-GGG-CTTCSCBCHHH
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHH---------HHHH-HHh-CCCCCCCCHHH
Confidence            999999999999999999999999999999999999999999865422110         0011 111 23378899999


Q ss_pred             HHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          243 VANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       243 va~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|+++++++++...+++|+.+.+|||+...
T Consensus       229 va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          229 VADVVAFLASEDSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTC---
T ss_pred             HHHHHHHHcCCcccCCCCCEEEECCCceec
Confidence            999999999887789999999999998754

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=5.1e-43  Score=297.58  Aligned_cols=248  Identities=34%  Similarity=0.460  Sum_probs=212.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+.. ..++.++.+|++|++++.++++++.+.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999998777666555532 346888999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC--ccch
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP--HAYT  169 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~--~~Y~  169 (280)
                      ++++|++|||||+.... .++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++.  ..|+
T Consensus        88 ~~~id~vi~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~  166 (260)
T 3awd_A           88 EGRVDILVACAGICISE-VKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYN  166 (260)
T ss_dssp             HSCCCEEEECCCCCCCS-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHH
T ss_pred             cCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccH
Confidence            99999999999987521 67888999999999999999999999999999987778999999999998887777  8999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||++++.|++.++.|++++||++++|+||+++|++.........       ....+. .. .+.+++.+|+|+|+++++
T Consensus       167 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-------~~~~~~-~~-~~~~~~~~~~dva~~~~~  237 (260)
T 3awd_A          167 ASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPE-------LYDAWI-AG-TPMGRVGQPDEVASVVQF  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHH-------HHHHHH-HT-CTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChH-------HHHHHH-hc-CCcCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999998652111100       011111 12 234789999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcc
Q 023553          250 LASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |++....+++|+.+.+|||+.
T Consensus       238 l~~~~~~~~~G~~~~v~gg~~  258 (260)
T 3awd_A          238 LASDAASLMTGAIVNVDAGFT  258 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HhCchhccCCCcEEEECCcee
Confidence            999877899999999999975

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=1.1e-43  Score=301.89  Aligned_cols=244  Identities=18%  Similarity=0.234  Sum_probs=204.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHH---cCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHK---HGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~---~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++++|++|||||++|||+++++.|++   +|++|++++|+.+.+++..+++..   ..++.++.+|+++++++.++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999   899999999998887776666532   346888999999999999999999


Q ss_pred             HH--HhCCcc--EEEECCCCCCCCCCCCCC-CCHHHHHHHhhhhhhhHHHHHHHHHHhcccC--CCceEEEEcccccccc
Q 023553           89 VE--KFGTLD--IMVNNAGISGAPCPDIRE-ADLSEFEKVFDINVKGVFHGMKHAARIMIPQ--TKGTIISICSVAGAIG  161 (280)
Q Consensus        89 ~~--~~g~id--~li~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~g~iv~isS~~~~~~  161 (280)
                      .+  .+|++|  +||||||+......++.+ .+.++|++++++|+.++++++++++|.|+++  +.|+||++||..+..+
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence            88  668899  999999986432245677 7899999999999999999999999999876  5699999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHH
Q 023553          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      .++...|++||+|+++|+++++.|+++  |+||+|+||+++|++.......... .    ..........+ .+++.+|+
T Consensus       163 ~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~-~----~~~~~~~~~~p-~~~~~~p~  234 (259)
T 1oaa_A          163 YKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKD-P----ELRSKLQKLKS-DGALVDCG  234 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSC-H----HHHHHHHHHHH-TTCSBCHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCC-h----hHHHHHHHhhh-cCCcCCHH
Confidence            999999999999999999999999974  9999999999999986542110000 0    01111112222 37899999


Q ss_pred             HHHHHHHHhcCCCCCceeecEEEeCC
Q 023553          242 DVANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       242 dva~~i~~l~s~~~~~~~G~~i~~dg  267 (280)
                      |+|+++++|+++ ..++||+++.+||
T Consensus       235 dvA~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          235 TSAQKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHHHHHHhh-ccccCCcEEeccC
Confidence            999999999985 6799999999987

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-43  Score=303.15  Aligned_cols=264  Identities=26%  Similarity=0.352  Sum_probs=216.2

Q ss_pred             CCCCCCCCCcccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC------CCCCeEEEecC
Q 023553            1 MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG------GEPDTFFCHCD   74 (280)
Q Consensus         1 ~~~~~~~~~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~------~~~~~~~~~~D   74 (280)
                      |.+.+......+...+++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.      ...++.++.+|
T Consensus         1 ~~~~~~~~~~~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D   80 (303)
T 1yxm_A            1 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN   80 (303)
T ss_dssp             ------CCCSBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECC
T ss_pred             CccccccCCccCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecC
Confidence            344444444445557899999999999999999999999999999999999887776665552      23578899999


Q ss_pred             CCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEc
Q 023553           75 VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~is  154 (280)
                      +++++++.++++.+.+.++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.+.+++.++||++|
T Consensus        81 ~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~is  158 (303)
T 1yxm_A           81 IRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNII  158 (303)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence            999999999999999999999999999997654  677889999999999999999999999999976655579999999


Q ss_pred             cccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCC
Q 023553          155 SVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ  234 (280)
Q Consensus       155 S~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (280)
                      |.. ..+.++...|+++|+++.++++.++.+++++||++++|+||+++|++.........  ..   ....+ ... .+.
T Consensus       159 S~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~---~~~~~-~~~-~p~  230 (303)
T 1yxm_A          159 VPT-KAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWG--QS---FFEGS-FQK-IPA  230 (303)
T ss_dssp             CCC-TTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG--GG---GGTTG-GGG-STT
T ss_pred             eec-ccCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccc--hH---HHHHH-Hhc-Ccc
Confidence            998 77888889999999999999999999999999999999999999996432221100  00   01111 111 234


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccccC
Q 023553          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       235 ~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      +++.+|+|+|+++++|+++...+++|+++.+|||......
T Consensus       231 ~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~~~  270 (303)
T 1yxm_A          231 KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTH  270 (303)
T ss_dssp             SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCBT
T ss_pred             cCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeecccc
Confidence            7899999999999999998888999999999999876544

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=4.7e-43  Score=293.73  Aligned_cols=230  Identities=23%  Similarity=0.272  Sum_probs=204.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  ...++.++.||+++++++.++++++.+.+++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            47999999999999999999999999999999999988877766553  2357889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++++++|+.++++++++++|.| +++.+++|+++|..+..+.++...|++||+|
T Consensus        81 id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa  157 (235)
T 3l77_A           81 VDVVVANAGLGYF--KRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSL-KRTGGLALVTTSDVSARLIPYGGGYVSTKWA  157 (235)
T ss_dssp             CSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH-HHHTCEEEEECCGGGSSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCccccc--cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCcEEEEecchhcccCCCcchHHHHHHH
Confidence            9999999999765  789999999999999999999999999999999 4456899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++|+++++.+  .+||+|++|+||+++|++..........                   .++.+|+|+|+++++|++..
T Consensus       158 ~~~~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~~-------------------~~~~~p~dva~~v~~l~~~~  216 (235)
T 3l77_A          158 ARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGKPKE-------------------KGYLKPDEIAEAVRCLLKLP  216 (235)
T ss_dssp             HHHHHHHHHHH--CTTSEEEEEEECSBSSSTTTCCSCCCGG-------------------GTCBCHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHhhc--CCCeEEEEEeCCccccccccccCCcccc-------------------cCCCCHHHHHHHHHHHHcCC
Confidence            99999999544  6789999999999999997665432110                   35789999999999999999


Q ss_pred             CCceeecEEEeCCCcc
Q 023553          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+++..|+|..
T Consensus       217 ~~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          217 KDVRVEELMLRSVYQR  232 (235)
T ss_dssp             TTCCCCEEEECCTTSC
T ss_pred             CCCccceEEEeecccC
Confidence            9999999999999974

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.9e-43  Score=297.99  Aligned_cols=243  Identities=30%  Similarity=0.480  Sum_probs=189.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++||||++|||++++++|+++|++|+++ .|+.+..++..+.+.. ..++.++.+|++++++++++++++.+.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999999998 5666666665555432 3568889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++||
T Consensus        82 ~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  159 (247)
T 2hq1_A           82 GRIDILVNNAGITRD--TLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASK  159 (247)
T ss_dssp             SCCCEEEECC-----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHH
Confidence            999999999998754  667788999999999999999999999999999877789999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ++++.+++.++.|++++||++++++||+++|++.....+ . .       ...+ ... .+.+++.+|+|+|++++++++
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~-~-------~~~~-~~~-~~~~~~~~~~dva~~~~~l~~  228 (247)
T 2hq1_A          160 AGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPD-K-V-------KEMY-LNN-IPLKRFGTPEEVANVVGFLAS  228 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH-H-H-------HHHH-HTT-STTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcch-H-H-------HHHH-Hhh-CCCCCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999998654311 0 0       1111 111 234789999999999999998


Q ss_pred             CCCCceeecEEEeCCCcc
Q 023553          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      +...+++|+.+++|||+.
T Consensus       229 ~~~~~~~G~~~~v~gG~~  246 (247)
T 2hq1_A          229 DDSNYITGQVINIDGGLV  246 (247)
T ss_dssp             GGGTTCCSCEEEESTTC-
T ss_pred             cccccccCcEEEeCCCcc
Confidence            877899999999999975

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=4e-43  Score=292.09  Aligned_cols=221  Identities=23%  Similarity=0.288  Sum_probs=190.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+.+                   +|++|++++++++++    ++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------~D~~~~~~v~~~~~~----~g   58 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------LDISDEKSVYHYFET----IG   58 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------CCTTCHHHHHHHHHH----HC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------cCCCCHHHHHHHHHH----hC
Confidence            4678999999999999999999999999999999999865                   799999999888774    48


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+.... .++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.++...|++||+
T Consensus        59 ~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~  135 (223)
T 3uce_A           59 AFDHLIVTAGSYAPA-GKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAINA  135 (223)
T ss_dssp             SEEEEEECCCCCCCC-SCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCC-CCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHHH
Confidence            999999999987432 78889999999999999999999999999999965  589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+++|+++++.|+++  |+||+|+||+++|++.........      .......... .+.+++.+|+|+|+++++|++ 
T Consensus       136 a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~dvA~~~~~l~~-  205 (223)
T 3uce_A          136 AIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDR------DAMYQRTQSH-LPVGKVGEASDIAMAYLFAIQ-  205 (223)
T ss_dssp             HHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHH------HHHHHHHHHH-STTCSCBCHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhH------HHHHHHHhhc-CCCCCccCHHHHHHHHHHHcc-
Confidence            999999999999987  999999999999999766543211      1111112222 334899999999999999997 


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                       +.+++|+++.+|||+..
T Consensus       206 -~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          206 -NSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             -CTTCCSCEEEESTTGGG
T ss_pred             -CCCCCCcEEEecCCeec
Confidence             47999999999999875

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.5e-43  Score=301.85  Aligned_cols=244  Identities=23%  Similarity=0.369  Sum_probs=201.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .+++ |++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++....++.++.+|++|++++.++++++.+.++
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFA   96 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4456 999999999999999999999999999999999988888777765445788899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCc-eEEEEccccccccCCCCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g-~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|+||||||+.... .++.+.+.++|++++++|+.+++.+++.++|.|++++.| +||++||..+..+.++...|++||
T Consensus        97 ~iD~lvnnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asK  175 (272)
T 2nwq_A           97 TLRGLINNAGLALGT-DPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTK  175 (272)
T ss_dssp             SCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHH
Confidence            999999999986421 678889999999999999999999999999999877778 999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+++|+++++.|++++||+||+|+||+++|++..........      ........     ...++|+|+|+++++|++
T Consensus       176 aa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~------~~~~~~~~-----~~~~~pedvA~~v~~l~s  244 (272)
T 2nwq_A          176 AFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQA------RYDKTYAG-----AHPIQPEDIAETIFWIMN  244 (272)
T ss_dssp             HHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------------C-----CCCBCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchH------HHHHhhcc-----CCCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999986542211100      00010001     235799999999999998


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      + ..+++|+.+.+|+|...
T Consensus       245 ~-~~~~~g~~i~v~~~~~~  262 (272)
T 2nwq_A          245 Q-PAHLNINSLEIMPVSQS  262 (272)
T ss_dssp             S-CTTEEEEEEEEEETTEE
T ss_pred             C-CccCccceEEEeeccCc
Confidence            5 56899999999998543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=3.1e-43  Score=307.42  Aligned_cols=257  Identities=21%  Similarity=0.235  Sum_probs=201.0

Q ss_pred             cccccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCc-----------chHHHHHHHhCCCC---CeEEEecCC
Q 023553           12 AVQRLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQD-----------NLGQQVCQSLGGEP---DTFFCHCDV   75 (280)
Q Consensus        12 ~~~~l~~k~vlItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~-----------~~~~~~~~~~~~~~---~~~~~~~D~   75 (280)
                      +.++++||++|||||  ++|||+++|+.|+++|++|++++|++           +.+++. +.+....   ...++.+|+
T Consensus         3 ~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~   81 (315)
T 2o2s_A            3 FPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLDA   81 (315)
T ss_dssp             -CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECCT
T ss_pred             CcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhccccccccccccccc
Confidence            456689999999999  89999999999999999999998763           122222 2222111   123333432


Q ss_pred             ------------C--------CHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHH
Q 023553           76 ------------T--------KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM  135 (280)
Q Consensus        76 ------------~--------~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  135 (280)
                                  +        ++++++++++++.+.+|++|+||||||+......++.+.+.++|++++++|+.++++++
T Consensus        82 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  161 (315)
T 2o2s_A           82 AFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLL  161 (315)
T ss_dssp             TCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence                        3        25688999999999999999999999976422267888999999999999999999999


Q ss_pred             HHHHHhcccCCCceEEEEccccccccCCCC-ccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCceeccccccCCCcc
Q 023553          136 KHAARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEE  213 (280)
Q Consensus       136 ~~~~~~l~~~~~g~iv~isS~~~~~~~~~~-~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~  213 (280)
                      ++++|.|++  .|+||++||.++..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++........
T Consensus       162 ~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~  239 (315)
T 2o2s_A          162 QHFGPIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSG  239 (315)
T ss_dssp             HHHSTTEEE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSS
T ss_pred             HHHHHHHhc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccc
Confidence            999999965  4899999999999888887 59999999999999999999985 8999999999999999865432111


Q ss_pred             hhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccccC
Q 023553          214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      ...  ............ .+.+++.+|+|+|++++||+++...++||+++.+|||+.....
T Consensus       240 ~~~--~~~~~~~~~~~~-~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  297 (315)
T 2o2s_A          240 EKS--FIDYAIDYSYNN-APLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMGQ  297 (315)
T ss_dssp             SSC--HHHHHHHHHHHH-SSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             cch--hHHHHHHHHhcc-CCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeeecc
Confidence            000  000111111122 3448999999999999999998889999999999999876543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=2.2e-42  Score=292.77  Aligned_cols=246  Identities=31%  Similarity=0.504  Sum_probs=212.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.. ..++.++.+|+++++++.++++++.+.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            3468899999999999999999999999999999999998877766655532 346888999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||....  .++ +.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++|
T Consensus        86 ~~~~d~vi~~Ag~~~~--~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  162 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASS  162 (255)
T ss_dssp             HSSCCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHH
Confidence            9999999999998754  445 7889999999999999999999999999987778999999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++.+++.++.+++++||++++++||++.|++........         ........ .+.+++++|+|+|+++++|+
T Consensus       163 K~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~dva~~~~~l~  232 (255)
T 1fmc_A          163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE---------IEQKMLQH-TPIRRLGQPQDIANAALFLC  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHH---------HHHHHHHT-CSSCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChH---------HHHHHHhc-CCcccCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999876532211         11111122 23478999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+++.+|||...
T Consensus       233 ~~~~~~~~G~~~~v~gg~~~  252 (255)
T 1fmc_A          233 SPAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             SGGGTTCCSCEEEESTTSCC
T ss_pred             CCccccCCCcEEEECCceec
Confidence            88778899999999999754

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.1e-42  Score=298.81  Aligned_cols=246  Identities=23%  Similarity=0.388  Sum_probs=208.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+.. ..++.++.+|+++++++.++++++.+.
T Consensus        29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999998766655544422 246888999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCC-CCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc--CCCCccc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--GLGPHAY  168 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~--~~~~~~Y  168 (280)
                      ++++|++|||||+.... .++. +.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+  .++...|
T Consensus       109 ~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  187 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQ-GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPY  187 (279)
T ss_dssp             HSCCSEEEECGGGSTTC---CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHH
T ss_pred             hCCCCEEEECCcccccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccH
Confidence            99999999999986431 3455 788899999999999999999999999998777899999999999887  7788899


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||++++.|++.++.|++++| +|++|+||+++|++.... .. ..       ...+. .. .+.+++.+|+|+|++++
T Consensus       188 ~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-~~-~~-------~~~~~-~~-~p~~~~~~~~dvA~~~~  255 (279)
T 3ctm_A          188 NTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-SK-DM-------KAKWW-QL-TPLGREGLTQELVGGYL  255 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-CH-HH-------HHHHH-HH-STTCSCBCGGGTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-Ch-HH-------HHHHH-Hh-CCccCCcCHHHHHHHHH
Confidence            9999999999999999999999 999999999999987422 11 10       11111 12 23478999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+++...+++|+++.+|||+..
T Consensus       256 ~l~s~~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          256 YLASNASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHhCccccCccCCEEEECCCeec
Confidence            99998888999999999999763

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=6.3e-43  Score=294.31  Aligned_cols=240  Identities=31%  Similarity=0.498  Sum_probs=207.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ||+++||||++|||++++++|+++|++|+++ +|+.+..++..+.+.. ..++.++.+|+++++++.++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999994 7887766665554432 2467888999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++||+++
T Consensus        81 d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (244)
T 1edo_A           81 DVVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGV  158 (244)
T ss_dssp             SEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCC--cCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHH
Confidence            999999998765  678889999999999999999999999999999877789999999999999989999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc-CCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA-SDE  254 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~-s~~  254 (280)
                      +.+++.++.+++++||++++++||+++|++.....+.          ....... ..+.+++.+|+|+|+++++|+ ++.
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~dva~~~~~l~~~~~  227 (244)
T 1edo_A          159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED----------MEKKILG-TIPLGRTGQPENVAGLVEFLALSPA  227 (244)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH----------HHHHHHT-SCTTCSCBCHHHHHHHHHHHHHCSG
T ss_pred             HHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChH----------HHHHHhh-cCCCCCCCCHHHHHHHHHHHhCCCc
Confidence            9999999999999999999999999999987653211          1111111 223478999999999999999 666


Q ss_pred             CCceeecEEEeCCCcc
Q 023553          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+++.+|||+.
T Consensus       228 ~~~~~G~~~~v~gG~~  243 (244)
T 1edo_A          228 ASYITGQAFTIDGGIA  243 (244)
T ss_dssp             GGGCCSCEEEESTTTT
T ss_pred             cCCcCCCEEEeCCCcc
Confidence            7799999999999975

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=1.3e-42  Score=292.39  Aligned_cols=241  Identities=28%  Similarity=0.387  Sum_probs=206.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.   ...++.+|+++++++.++++    .+
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP---GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC---CCCEEEEeCCCHHHHHHHHH----Hc
Confidence            457899999999999999999999999999999999999887776665543   34567999999999887776    56


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+.++...|++|
T Consensus        75 ~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 3d3w_A           75 GPVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             CCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCEEEECCccCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHH
Confidence            899999999998754  6788899999999999999999999999999997766 6999999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++.+++.++.|++++||++++|+||+++|++..........       ...+ ... .+.+++.+|+|+|+++++++
T Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~-------~~~~-~~~-~~~~~~~~~~dva~~~~~l~  223 (244)
T 3d3w_A          153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK-------AKTM-LNR-IPLGKFAEVEHVVNAILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTH-------HHHH-HHT-CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHH-------HHHH-Hhh-CCCCCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999986543221111       0111 111 23478999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+++.+|||++.
T Consensus       224 ~~~~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          224 SDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CccccCCCCCEEEECCCccC
Confidence            87778999999999999764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.7e-43  Score=298.33  Aligned_cols=236  Identities=18%  Similarity=0.156  Sum_probs=199.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-e--cCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIA-D--VQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~--r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +|++|||||++|||+++++.|+++|++|+++ +  |+.+.+++..+++ ..       +|+.++++++++++++.+.+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~~-------~~~~~~~~v~~~~~~~~~~~g~   72 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-PG-------TIALAEQKPERLVDATLQHGEA   72 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-TT-------EEECCCCCGGGHHHHHGGGSSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-CC-------CcccCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999999 6  9988887776665 11       1233777788889999999999


Q ss_pred             ccEEEECCCCCCCC-CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           95 LDIMVNNAGISGAP-CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|+||||||+.... ..++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus        73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  152 (244)
T 1zmo_A           73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARA  152 (244)
T ss_dssp             EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHH
T ss_pred             CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHH
Confidence            99999999986420 04678899999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceecccc---ccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA---LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      |+++|+++++.|++++||+||+|+||+++|++.   .... .+       +....+.... .+.+++.+|+|+|+++++|
T Consensus       153 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~-------~~~~~~~~~~-~p~~r~~~pe~vA~~v~~l  223 (244)
T 1zmo_A          153 ATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWE-NN-------PELRERVDRD-VPLGRLGRPDEMGALITFL  223 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHH-HC-------HHHHHHHHHH-CTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccccccc-ch-------HHHHHHHhcC-CCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999986   3211 00       0011111112 2348899999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcc
Q 023553          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++...++||+++.+|||+.
T Consensus       224 ~s~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          224 ASRRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             HTTTTGGGTTCEEEESTTCC
T ss_pred             cCccccCccCCEEEeCCCCC
Confidence            99988999999999999963

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=5.4e-43  Score=296.89  Aligned_cols=235  Identities=18%  Similarity=0.225  Sum_probs=198.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      |++|||||++|||+++++.|+++|++|++++|+.+.++...+ +.. ..++..+     |+++++++++++.+.++++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence            789999999999999999999999999999999887666544 321 2333333     666778889999999999999


Q ss_pred             EEECCCCC-CCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           98 MVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        98 li~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ||||||+. ..  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+|++
T Consensus        76 lv~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  153 (254)
T 1zmt_A           76 LVSNDIFAPEF--QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGAC  153 (254)
T ss_dssp             EEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHH
T ss_pred             EEECCCcCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHH
Confidence            99999987 43  6788999999999999999999999999999998777899999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCce---------eccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAV---------ATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      +|+++++.|++++||+||+|+||++         +|++....   .       .....+ ... .+.+++.+|+|+|+++
T Consensus       154 ~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~---~-------~~~~~~-~~~-~p~~~~~~p~dvA~~v  221 (254)
T 1zmt_A          154 TLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN---P-------EHVAHV-KKV-TALQRLGTQKELGELV  221 (254)
T ss_dssp             HHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC---H-------HHHHHH-HHH-SSSSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccC---h-------HHHHHH-hcc-CCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999         66654321   0       001111 122 2348899999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCccccc
Q 023553          248 LFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ++|+++...+++|+++.+|||+....
T Consensus       222 ~~l~s~~~~~~tG~~~~vdgG~~~~~  247 (254)
T 1zmt_A          222 AFLASGSCDYLTGQVFWLAGGFPMIE  247 (254)
T ss_dssp             HHHHTTSCGGGTTCEEEESTTCCCCC
T ss_pred             HHHhCcccCCccCCEEEECCCchhhc
Confidence            99999888899999999999987643

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=6.9e-43  Score=295.44  Aligned_cols=239  Identities=23%  Similarity=0.327  Sum_probs=195.5

Q ss_pred             CCCcccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHH
Q 023553            7 TDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus         7 ~~~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ...+++..++++|++|||||++|||+++|+.|+++|++|++++|+.+..+    .+   +.+.++ +|+  .+++.++++
T Consensus         8 ~~~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~---~~~~~~-~D~--~~~~~~~~~   77 (249)
T 1o5i_A            8 HHHHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS---GHRYVV-CDL--RKDLDLLFE   77 (249)
T ss_dssp             --------CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT---CSEEEE-CCT--TTCHHHHHH
T ss_pred             hhhhhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh---CCeEEE-eeH--HHHHHHHHH
Confidence            34556667899999999999999999999999999999999999874332    22   256667 999  445555555


Q ss_pred             HHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        87 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                      ++    .++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++..
T Consensus        78 ~~----~~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  151 (249)
T 1o5i_A           78 KV----KEVDILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLY  151 (249)
T ss_dssp             HS----CCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBH
T ss_pred             Hh----cCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCc
Confidence            44    489999999998754  678899999999999999999999999999999887789999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||++++.|++.++.|++++||+|++|+||+++|++.....+.  .       ....... ..+.+++++|+|+|++
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~-------~~~~~~~-~~p~~~~~~~~dvA~~  221 (249)
T 1o5i_A          152 TSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE--E-------KKKQVES-QIPMRRMAKPEEIASV  221 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH--H-------HHHHHHT-TSTTSSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchh--h-------HHHHHHh-cCCCCCCcCHHHHHHH
Confidence            9999999999999999999999999999999999999986432111  0       0101111 2234889999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCccc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++|+++...+++|+++.+|||+..
T Consensus       222 i~~l~s~~~~~~tG~~~~vdgG~~~  246 (249)
T 1o5i_A          222 VAFLCSEKASYLTGQTIVVDGGLSK  246 (249)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHcCccccCCCCCEEEECCCccc
Confidence            9999998888999999999999754

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=2e-42  Score=292.46  Aligned_cols=237  Identities=23%  Similarity=0.325  Sum_probs=197.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      |+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.  .++.++.+|++++++++++++++.+.++++|+|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            689999999999999999999999999999999888887777664  467889999999999999999998889999999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      |||||+.... .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+++++|
T Consensus        79 vnnAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  157 (248)
T 3asu_A           79 VNNAGLALGM-EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF  157 (248)
T ss_dssp             EECCCCCCCC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCcCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHH
Confidence            9999986321 668889999999999999999999999999999877789999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCcee-ccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCc
Q 023553          179 NKNVAAELGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~  257 (280)
                      +++++.|++++||+||+|+||+++ |++..........      ........     ....+|+|+|+++++|+++ ..+
T Consensus       158 ~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~------~~~~~~~~-----~~~~~p~dvA~~v~~l~s~-~~~  225 (248)
T 3asu_A          158 SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDG------KAEKTYQN-----TVALTPEDVSEAVWWVSTL-PAH  225 (248)
T ss_dssp             HHHHHHHTTTSCCEEEEEEECSBCC---------------------------------CCBCHHHHHHHHHHHHHS-CTT
T ss_pred             HHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchH------HHHHHHhc-----cCCCCHHHHHHHHHHHhcC-Ccc
Confidence            999999999999999999999999 9986432111000      00000001     2346999999999999986 568


Q ss_pred             eeecEEEeCCCcc
Q 023553          258 ISGTNLMVDGGFT  270 (280)
Q Consensus       258 ~~G~~i~~dgG~~  270 (280)
                      ++|+.+.++++..
T Consensus       226 ~~g~~i~v~~~~~  238 (248)
T 3asu_A          226 VNINTLEMMPVTQ  238 (248)
T ss_dssp             CCCCEEEECCTTC
T ss_pred             ceeeEEEEccccc
Confidence            9999999998843

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.1e-43  Score=297.56  Aligned_cols=246  Identities=24%  Similarity=0.286  Sum_probs=197.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH-h
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK-F   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   92 (280)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.. ..++.++.+|+++++++.++++++.+. +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46799999999999999999999999999999999998877766665532 246788999999999999999999886 8


Q ss_pred             CCccEEEECCC--CCC---CCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023553           93 GTLDIMVNNAG--ISG---APCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        93 g~id~li~~ag--~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~  167 (280)
                      +++|+||||||  +..   ....++.+.+.++|++++++|+.+++.+++.++|.|++++.|+||++||..+..+. +...
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~  160 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVP  160 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHH
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCc
Confidence            99999999995  320   01256788899999999999999999999999999988778999999999987754 4689


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++............      .........+.++..+|+|+|+++
T Consensus       161 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~pe~va~~v  234 (260)
T 2qq5_A          161 YGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQ------DPVLKQFKSAFSSAETTELSGKCV  234 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------------CHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccc------hhHHHHHHhhhccCCCHHHHHHHH
Confidence            99999999999999999999999999999999999998654332111100      000010111235567999999999


Q ss_pred             HHhcCCCC-CceeecEEEeCC
Q 023553          248 LFLASDEA-RYISGTNLMVDG  267 (280)
Q Consensus       248 ~~l~s~~~-~~~~G~~i~~dg  267 (280)
                      +||+++.. .++||+++..|+
T Consensus       235 ~~l~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          235 VALATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             HHHHTCTTGGGGTTCEEEHHH
T ss_pred             HHHhcCcccccccceeechhh
Confidence            99999876 489999998874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1e-42  Score=295.13  Aligned_cols=245  Identities=33%  Similarity=0.439  Sum_probs=209.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.++++|+++||||++|||++++++|+++|++|++++|+ .+.+++..+++.. ..++.++.+|++++++++++++++.+
T Consensus         2 ~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            2 FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999 7777666555532 34688899999999999999999999


Q ss_pred             HhCCccEEEECCCC-CCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC--C---ceEEEEccccccc-cCC
Q 023553           91 KFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--K---GTIISICSVAGAI-GGL  163 (280)
Q Consensus        91 ~~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~---g~iv~isS~~~~~-~~~  163 (280)
                      .++++|++|||||+ ...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++  .   ++||++||..+.. +.+
T Consensus        82 ~~g~id~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  159 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGR--KPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGP  159 (258)
T ss_dssp             HHSSCSEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCT
T ss_pred             HcCCCCEEEECCCCcCCc--CccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCC
Confidence            99999999999997 433  6788899999999999999999999999999987543  3   8999999999987 788


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHH
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV  243 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  243 (280)
                      +...|++||++++.+++.++.+++++||++++|+||+++|++.....+.          +....... .+.+++++|+|+
T Consensus       160 ~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~dv  228 (258)
T 3afn_B          160 GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQD----------VRDRISNG-IPMGRFGTAEEM  228 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHH----------HHHHHHTT-CTTCSCBCGGGT
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHH----------HHHHHhcc-CCCCcCCCHHHH
Confidence            8999999999999999999999999999999999999999986543110          11111122 234789999999


Q ss_pred             HHHHHHhcCCCCC-ceeecEEEeCCCcc
Q 023553          244 ANAVLFLASDEAR-YISGTNLMVDGGFT  270 (280)
Q Consensus       244 a~~i~~l~s~~~~-~~~G~~i~~dgG~~  270 (280)
                      |+++++++++... +++|+++.+|||+.
T Consensus       229 a~~~~~l~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          229 APAFLFFASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HHHHHHHHCHHHHTTCCSEEEEESTTSS
T ss_pred             HHHHHHHhCcchhccccCCEEeECCCcc
Confidence            9999999987666 89999999999974

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.3e-41  Score=295.22  Aligned_cols=249  Identities=25%  Similarity=0.340  Sum_probs=210.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+..  ..++.++.+|+++.+++.++++.+.+
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999998877766655532  24688899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcc-cCCCceEEEEccccccccCCCCccch
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|. +.+.++||++||..+..+.++...|+
T Consensus       101 ~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  178 (302)
T 1w6u_A          101 VAGHPNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA  178 (302)
T ss_dssp             HTCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhH
Confidence            99999999999998654  6788899999999999999999999999999997 44568999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceecc-ccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATG-LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      +||++++.|++.++.+++++||++++|+||+++|+ +.....+....       ...+ ... .+.+++++|+|+|++++
T Consensus       179 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-------~~~~-~~~-~p~~~~~~~~dva~~~~  249 (302)
T 1w6u_A          179 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF-------EKEM-IGR-IPCGRLGTVEELANLAA  249 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHH-------HHHH-HTT-CTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhh-------HHHH-Hhc-CCcCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999998 43332221110       0111 122 23478999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCcccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|+++...+++|+.+.+|||....
T Consensus       250 ~l~~~~~~~~~G~~~~v~gg~~~~  273 (302)
T 1w6u_A          250 FLCSDYASWINGAVIKFDGGEEVL  273 (302)
T ss_dssp             HHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHcCCcccccCCCEEEECCCeeec
Confidence            999987889999999999997643

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=3.1e-43  Score=307.93  Aligned_cols=257  Identities=20%  Similarity=0.253  Sum_probs=171.1

Q ss_pred             cccccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCc-----------chHHH-----------HHHHhCCCC-
Q 023553           12 AVQRLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQD-----------NLGQQ-----------VCQSLGGEP-   66 (280)
Q Consensus        12 ~~~~l~~k~vlItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~-----------~~~~~-----------~~~~~~~~~-   66 (280)
                      +.+++++|++|||||  ++|||+++|+.|+++|++|++++|++           +.+++           ..+++...+ 
T Consensus         3 ~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (319)
T 2ptg_A            3 LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV   82 (319)
T ss_dssp             CCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC------------------------------
T ss_pred             cccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc
Confidence            445689999999999  89999999999999999999998753           11111           112221111 


Q ss_pred             ---CeEEEecC--CCC------------------HHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHH
Q 023553           67 ---DTFFCHCD--VTK------------------EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV  123 (280)
Q Consensus        67 ---~~~~~~~D--~~~------------------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~  123 (280)
                         ...++.+|  +++                  ++++.++++++.++++++|+||||||+......++.+.+.++|+++
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~  162 (319)
T 2ptg_A           83 DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAA  162 (319)
T ss_dssp             --CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred             cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence               02333333  332                  3478999999999999999999999976322267889999999999


Q ss_pred             hhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC-ccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCce
Q 023553          124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAV  201 (280)
Q Consensus       124 ~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~-~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v  201 (280)
                      +++|+.++++++++++|+|++  .|+||++||..+..+.++. ..|++||+|+++|+++|+.|+++ +||+||+|+||++
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v  240 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPL  240 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             HhHhhHHHHHHHHHHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCc
Confidence            999999999999999999965  4899999999999888887 69999999999999999999985 8999999999999


Q ss_pred             eccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccccc
Q 023553          202 ATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       202 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      +|++..........  ............ ..+.+++.+|+|+|++++||+++...++||++|.+|||+...+
T Consensus       241 ~T~~~~~~~~~~~~--~~~~~~~~~~~~-~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  309 (319)
T 2ptg_A          241 KSRAASAIGKAGDK--TFIDLAIDYSEA-NAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAMG  309 (319)
T ss_dssp             C----------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC-
T ss_pred             cChhhhhcccccch--hhHHHHHHHHhc-cCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceeec
Confidence            99986543211000  000001011111 1234889999999999999999888999999999999987654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=6e-43  Score=328.98  Aligned_cols=230  Identities=28%  Similarity=0.449  Sum_probs=198.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc---------chHHHHHHHhCCC-CCeEEEecCCCCHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD---------NLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~   83 (280)
                      ++++||+++||||++|||+++|+.|+++|++|++++|+.         +.+++..+++... ...   .+|++|.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHH
Confidence            468899999999999999999999999999999998764         5555555555322 222   358888888889


Q ss_pred             HHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC
Q 023553           84 AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL  163 (280)
Q Consensus        84 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~  163 (280)
                      +++++.+.+|+||+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||.++..+.+
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~  158 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRD--ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF  158 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence            999999999999999999999765  788999999999999999999999999999999888889999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHH
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV  243 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  243 (280)
                      +...|++||+|+.+|+++|+.|++++||+||+|+|| +.|+|.....+.+            .        ....+|+|+
T Consensus       159 ~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~~------------~--------~~~~~pe~v  217 (604)
T 2et6_A          159 GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPPP------------M--------LEKLGPEKV  217 (604)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCHH------------H--------HTTCSHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCChh------------h--------hccCCHHHH
Confidence            999999999999999999999999999999999998 6898865432210            0        123589999


Q ss_pred             HHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          244 ANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       244 a~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |.+++||+++. .++||+++.+|||+.
T Consensus       218 A~~v~~L~s~~-~~itG~~~~vdgG~~  243 (604)
T 2et6_A          218 APLVLYLSSAE-NELTGQFFEVAAGFY  243 (604)
T ss_dssp             HHHHHHHTSSS-CCCCSCEEEEETTEE
T ss_pred             HHHHHHHhCCc-ccCCCCEEEECCCeE
Confidence            99999999988 899999999999975

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=5.2e-43  Score=294.74  Aligned_cols=226  Identities=16%  Similarity=0.114  Sum_probs=198.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--   92 (280)
                      ..++|++|||||++|||++++++|+++|++|++++|+.+..+         ....++.+|+++++++.++++++.+.+  
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   74 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------SASVIVKMTDSFTEQADQVTAEVGKLLGD   74 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            467999999999999999999999999999999999876532         134677899999999999999999999  


Q ss_pred             CCccEEEECCCCCCCCCCCC-CCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDI-READLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||+...  .++ .+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|++|
T Consensus        75 g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  150 (241)
T 1dhr_A           75 QKVDAILCVAGGWAG--GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMA  150 (241)
T ss_dssp             CCEEEEEECCCCCCC--BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             CCCCEEEEcccccCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHH
Confidence            799999999998754  566 78889999999999999999999999999965  4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHC--CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          172 KHAVLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       172 K~al~~~~~~la~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      |+|++.|++.++.|++  ++||+|++|+||+++|++.....+...                   ..++.+|+|+|+++++
T Consensus       151 K~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-------------------~~~~~~~~~vA~~v~~  211 (241)
T 1dhr_A          151 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEAD-------------------FSSWTPLEFLVETFHD  211 (241)
T ss_dssp             HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSC-------------------GGGSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcchh-------------------hccCCCHHHHHHHHHH
Confidence            9999999999999999  899999999999999998654322110                   0234578999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccc
Q 023553          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++++...+++|+.+.+|||....
T Consensus       212 l~~~~~~~~~G~~~~v~g~~~~~  234 (241)
T 1dhr_A          212 WITGNKRPNSGSLIQVVTTDGKT  234 (241)
T ss_dssp             HHTTTTCCCTTCEEEEEEETTEE
T ss_pred             HhcCCCcCccceEEEEeCCCCce
Confidence            99998999999999999987643

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=2e-42  Score=300.41  Aligned_cols=240  Identities=26%  Similarity=0.346  Sum_probs=198.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..++.++.||+++.+++.++++++.+.
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            3458999999999999999999999999999999999999988887777643 357889999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++...|++
T Consensus       106 ~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  183 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVA--GPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGV  183 (301)
T ss_dssp             HSSCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             CCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHH
Confidence            9999999999999865  7888999999999999999999999999999998766 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++++.|++++||+|++|+||+++|++.............. ................+++|+|+|++++.+
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~pedvA~~i~~~  262 (301)
T 3tjr_A          184 AKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGM-SATPEGAFGPLPTQDESVSADDVARLTADA  262 (301)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-----------------------CCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhcc-ccChhhhccccccccCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999875421110000000 000000000111225678999999999999


Q ss_pred             cCCCC
Q 023553          251 ASDEA  255 (280)
Q Consensus       251 ~s~~~  255 (280)
                      +....
T Consensus       263 l~~~~  267 (301)
T 3tjr_A          263 ILANR  267 (301)
T ss_dssp             HHHTC
T ss_pred             HhcCC
Confidence            87544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.2e-42  Score=325.09  Aligned_cols=230  Identities=30%  Similarity=0.524  Sum_probs=195.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++||+++||||++|||+++|+.|+++|++|++++++.  .++..+++. ...++..+.+|++  ++..++++++.+++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999998643  222333332 1245667788884  45667889999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      |+||+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||.++..+.++...|++||
T Consensus       394 G~iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asK  471 (604)
T 2et6_A          394 GTIDILVNNAGILRD--RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSK  471 (604)
T ss_dssp             SCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHH
Confidence            999999999999765  788999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+.+|+++|+.|++++||+||+|+||. +|+|.....+.+                    .....+|+|+|++++||++
T Consensus       472 aal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~~--------------------~~~~~~pe~vA~~v~~L~s  530 (604)
T 2et6_A          472 AGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQ--------------------DKNLYHADQVAPLLVYLGT  530 (604)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-----------------------------CCSSCGGGTHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCchh--------------------hccCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999996 999865432210                    0234689999999999999


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +... +||+++.+|||+..
T Consensus       531 ~~~~-itG~~~~vdGG~~~  548 (604)
T 2et6_A          531 DDVP-VTGETFEIGGGWIG  548 (604)
T ss_dssp             TTCC-CCSCEEEEETTEEE
T ss_pred             CccC-CCCcEEEECCCeeE
Confidence            9888 99999999999764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=5.9e-42  Score=288.41  Aligned_cols=240  Identities=30%  Similarity=0.450  Sum_probs=207.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEE-EecCCCCHHHHHHHHHHHHHHhCC
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFF-CHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-~~~~~~-~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +|+++||||++|||++++++|+++|++|+++ +|+.+..++..+.+.. ..++.. +.+|+++.++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            5899999999999999999999999999998 8887777666555432 235566 899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||++
T Consensus        81 ~d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  158 (245)
T 2ph3_A           81 LDTLVNNAGITRD--TLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAG  158 (245)
T ss_dssp             CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHH
Confidence            9999999998754  67888999999999999999999999999999987777999999999999888899999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      ++.+++.++.|++++||++++++||+++|++.....+.  .       ...+ ... .+.+++.+|+|+|++++++++..
T Consensus       159 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~-------~~~~-~~~-~~~~~~~~~~dva~~~~~l~~~~  227 (245)
T 2ph3_A          159 LIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQE--V-------KEAY-LKQ-IPAGRFGRPEEVAEAVAFLVSEK  227 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH--H-------HHHH-HHT-CTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHH--H-------HHHH-Hhc-CCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999987543210  0       1111 112 23478899999999999999887


Q ss_pred             CCceeecEEEeCCCcc
Q 023553          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+++.+|||+.
T Consensus       228 ~~~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          228 AGYITGQTLCVDGGLT  243 (245)
T ss_dssp             GTTCCSCEEEESTTCS
T ss_pred             cccccCCEEEECCCCC
Confidence            7899999999999964

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=2.3e-42  Score=299.51  Aligned_cols=251  Identities=24%  Similarity=0.250  Sum_probs=199.2

Q ss_pred             cccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcc-----------hHHHHHHHhCCCC--C-eEEEecC-
Q 023553           12 AVQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDN-----------LGQQVCQSLGGEP--D-TFFCHCD-   74 (280)
Q Consensus        12 ~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~-----------~~~~~~~~~~~~~--~-~~~~~~D-   74 (280)
                      +.+++++|++|||||+  +|||+++|+.|+++|++|++++|+..           .+++. +.+....  . ...+.+| 
T Consensus         2 ~~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   80 (297)
T 1d7o_A            2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECT
T ss_pred             CccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccce
Confidence            3456899999999999  99999999999999999999987531           11111 1121110  1 2333333 


Q ss_pred             -------CC----C--------HHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHH
Q 023553           75 -------VT----K--------EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM  135 (280)
Q Consensus        75 -------~~----~--------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  135 (280)
                             ++    +        +++++++++++.+.++++|+||||||+......++.+.+.++|++++++|+.++++++
T Consensus        81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  160 (297)
T 1d7o_A           81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence                   33    2        5688999999999999999999999975422267888999999999999999999999


Q ss_pred             HHHHHhcccCCCceEEEEccccccccCCCC-ccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCceeccccccCCCcc
Q 023553          136 KHAARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEE  213 (280)
Q Consensus       136 ~~~~~~l~~~~~g~iv~isS~~~~~~~~~~-~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~t~~~~~~~~~~  213 (280)
                      ++++|.|++  .|+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++.......+
T Consensus       161 ~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~  238 (297)
T 1d7o_A          161 SHFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID  238 (297)
T ss_dssp             HHHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHH
T ss_pred             HHHHHHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccH
Confidence            999999965  4899999999999988887 69999999999999999999985 8999999999999999865421100


Q ss_pred             hhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccccC
Q 023553          214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                              .+....... .+.+++.+|+|+|+++++|+++...+++|+++.+|||+...+.
T Consensus       239 --------~~~~~~~~~-~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~~~  290 (297)
T 1d7o_A          239 --------TMIEYSYNN-APIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGV  290 (297)
T ss_dssp             --------HHHHHHHHH-SSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             --------HHHHHhhcc-CCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceeecC
Confidence                    011111122 2348899999999999999998888999999999999876543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-41  Score=286.40  Aligned_cols=241  Identities=28%  Similarity=0.383  Sum_probs=205.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.+..++..++..   .+.++.+|++++++++++++    .+
T Consensus         2 ~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 1cyd_A            2 KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP---GIEPVCVDLGDWDATEKALG----GI   74 (244)
T ss_dssp             -CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc---CCCcEEecCCCHHHHHHHHH----Hc
Confidence            456889999999999999999999999999999999999887776655442   35567999999999887776    56


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++|
T Consensus        75 ~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 1cyd_A           75 GPVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSST  152 (244)
T ss_dssp             CCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCEEEECCcccCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHH
Confidence            789999999998754  6788899999999999999999999999999997766 6999999999999988889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++++.+++.++.+++++||++++++||++.|++..........       ...+ .+.. +.+++++|+|+|+++++++
T Consensus       153 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-------~~~~-~~~~-~~~~~~~~~dva~~~~~l~  223 (244)
T 1cyd_A          153 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEF-------ARKL-KERH-PLRKFAEVEDVVNSILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHH-------HHHH-HHHS-TTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHH-------HHHH-HhcC-CccCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999986543221111       0111 1122 3378999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+.+.+|||+..
T Consensus       224 ~~~~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          224 SDRSASTSGGGILVDAGYLA  243 (244)
T ss_dssp             SGGGTTCCSSEEEESTTGGG
T ss_pred             CchhhcccCCEEEECCCccC
Confidence            98888999999999999753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-41  Score=284.37  Aligned_cols=233  Identities=22%  Similarity=0.235  Sum_probs=209.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-------KVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++|++|||||++|||++++++|+++|+       +|++++|+.+.+++..+++.. ..++.++.+|+++++++.++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            378999999999999999999999999       999999998877777666543 346888999999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .+.++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|
T Consensus        81 ~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  158 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIY  158 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhCCCCCEEEEcCCcCCc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchh
Confidence            9999999999999998754  77888999999999999999999999999999987778999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+++++|++.++.+++++||++++|+||+++|++....... .              +     .++.+|+|+|++++
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~--------------~-----~~~~~~~dva~~~~  218 (244)
T 2bd0_A          159 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-M--------------Q-----ALMMMPEDIAAPVV  218 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-T--------------G-----GGSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcccc-c--------------c-----ccCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999987543211 0              0     25779999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++++....+++|+++..+||..+
T Consensus       219 ~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          219 QAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HHHTSCTTEEEEEEEEEETTCCC
T ss_pred             HHHhCCccccchheEEecccccc
Confidence            99999999999999999998665

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-41  Score=290.83  Aligned_cols=251  Identities=27%  Similarity=0.381  Sum_probs=209.2

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ..+++++|++|||||++|||++++++|+++|++|++++| +.+..++..+++.. ..++.++.+|++|++++.++++++.
T Consensus        15 ~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           15 ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999 66666655555432 3468889999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAY  168 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-~~~~~~~~Y  168 (280)
                      +.++++|++|||||+...  .++.+.+.++|++.+++|+.+++++++++++.|+ + +++||++||..+. .+.++...|
T Consensus        95 ~~~~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~~iv~~sS~~~~~~~~~~~~~Y  170 (274)
T 1ja9_A           95 SHFGGLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R-GGRIILTSSIAAVMTGIPNHALY  170 (274)
T ss_dssp             HHHSCEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E-EEEEEEECCGGGTCCSCCSCHHH
T ss_pred             HHcCCCCEEEECCCCCCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-CCEEEEEcChHhccCCCCCCchH
Confidence            999999999999998754  6788899999999999999999999999999997 3 3899999999998 777888999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc---c---hhhhhhhhhhHHHHhhhccCCCCCCCHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE---E---ERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      +++|++++.+++.++.+++.+||++++++||++.|++.......   .   ....   ......... ..+.+++++|+|
T Consensus       171 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~d  246 (274)
T 1ja9_A          171 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQ---EKIDEGLAN-MNPLKRIGYPAD  246 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCH---HHHHHHHHH-TSTTSSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCch---HHHHHHHHh-cCCCCCccCHHH
Confidence            99999999999999999999999999999999999986631100   0   0000   001111111 223478999999


Q ss_pred             HHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          243 VANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       243 va~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +|+++++|+++...+++|+++.+|||+.
T Consensus       247 va~~i~~l~~~~~~~~~G~~~~v~gG~~  274 (274)
T 1ja9_A          247 IGRAVSALCQEESEWINGQVIKLTGGGI  274 (274)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHhCcccccccCcEEEecCCcC
Confidence            9999999998877899999999999963

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=3.1e-42  Score=291.73  Aligned_cols=230  Identities=17%  Similarity=0.190  Sum_probs=197.1

Q ss_pred             CCcccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHH
Q 023553            8 DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus         8 ~~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .+++...+..+|++|||||++|||+++|+.|+++|++|++++|+.+..+           ...+.+|++|.+++++++++
T Consensus        12 ~~~~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~d~~d~~~v~~~~~~   80 (251)
T 3orf_A           12 SGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-----------DHSFTIKDSGEEEIKSVIEK   80 (251)
T ss_dssp             ----------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----------SEEEECSCSSHHHHHHHHHH
T ss_pred             ccccccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------ccceEEEeCCHHHHHHHHHH
Confidence            3344556677999999999999999999999999999999999987532           13578999999999999999


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~  167 (280)
                      +.+.++++|++|||||+.... ..+.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...
T Consensus        81 ~~~~~g~iD~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  157 (251)
T 3orf_A           81 INSKSIKVDTFVCAAGGWSGG-NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIA  157 (251)
T ss_dssp             HHTTTCCEEEEEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHH
T ss_pred             HHHHcCCCCEEEECCccCCCC-CcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCch
Confidence            999999999999999987652 33678889999999999999999999999999965  589999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHC--CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      |++||+|++.|++.++.|++  ++||+|++|+||+++|++.....+..                   +.+++.+|+|+|+
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~-------------------~~~~~~~~~dva~  218 (251)
T 3orf_A          158 YGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDA-------------------NFDDWTPLSEVAE  218 (251)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTTS-------------------CGGGSBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcccc-------------------cccccCCHHHHHH
Confidence            99999999999999999987  88999999999999999876543321                   1256789999999


Q ss_pred             HHHHhcCC-CCCceeecEEEeCCCcc
Q 023553          246 AVLFLASD-EARYISGTNLMVDGGFT  270 (280)
Q Consensus       246 ~i~~l~s~-~~~~~~G~~i~~dgG~~  270 (280)
                      ++++|++. ...+++|+++.+++|..
T Consensus       219 ~i~~l~~~~~~~~~tG~~i~v~~g~~  244 (251)
T 3orf_A          219 KLFEWSTNSDSRPTNGSLVKFETKSK  244 (251)
T ss_dssp             HHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred             HHHHHhcCccccCCcceEEEEecCCc
Confidence            99999998 88899999999998854

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=8.4e-42  Score=285.34  Aligned_cols=225  Identities=18%  Similarity=0.206  Sum_probs=187.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.  .++.++.+|++++++++++++++.+   ..|++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~l   76 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS--NNVGYRARDLASHQEVEQLFEQLDS---IPSTV   76 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCS--SCCCEEECCTTCHHHHHHHHHSCSS---CCSEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--hccCeEeecCCCHHHHHHHHHHHhh---cCCEE
Confidence            789999999999999999999999999999999998888877763  4677889999999999988886643   34999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      |||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|++++ ++||++||..+..+.++...|++||+|+++|
T Consensus        77 v~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  153 (230)
T 3guy_A           77 VHSAGSGYF--GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGL  153 (230)
T ss_dssp             EECCCCCCC--SCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEeCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHH
Confidence            999998765  7888999999999999999999999999999997655 4999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC-CCCCc
Q 023553          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS-DEARY  257 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s-~~~~~  257 (280)
                      ++.++.|++++||+|++|+||+++|++.......                   .+.+++.+|+|+|++++++++ +...+
T Consensus       154 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------------------~~~~~~~~~~dvA~~i~~l~~~~~~~~  214 (230)
T 3guy_A          154 IESVRLELKGKPMKIIAVYPGGMATEFWETSGKS-------------------LDTSSFMSAEDAALMIHGALANIGNGY  214 (230)
T ss_dssp             HHHHHHHTTTSSCEEEEEEECCC-----------------------------------CCCHHHHHHHHHHHCCEETTEE
T ss_pred             HHHHHHHHHhcCeEEEEEECCcccChHHHhcCCC-------------------CCcccCCCHHHHHHHHHHHHhCcCCCC
Confidence            9999999999999999999999999987653221                   012678999999999999987 67779


Q ss_pred             eeecEEEeCCCcc
Q 023553          258 ISGTNLMVDGGFT  270 (280)
Q Consensus       258 ~~G~~i~~dgG~~  270 (280)
                      ++|+.+..+.+..
T Consensus       215 itg~~~~~~~~~~  227 (230)
T 3guy_A          215 VSDITVNREGHHH  227 (230)
T ss_dssp             EEEEEEEC-----
T ss_pred             ccceeecCCCCCC
Confidence            9999999887643

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=8.7e-41  Score=287.26  Aligned_cols=245  Identities=21%  Similarity=0.267  Sum_probs=202.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+...  ..+.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYP--DRAEAISLDVTDGERIDVVAADVLARYGR   79 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCT--TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--CCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            3578999999999999999999999999999999999998888776653  46888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++||+|
T Consensus        80 id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (281)
T 3m1a_A           80 VDVLVNNAGRTQV--GAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAA  157 (281)
T ss_dssp             CSEEEECCCCEEE--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCcCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHH
Confidence            9999999998765  77889999999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc----chhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE----EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +++|++.++.|++++||+|++|+||+++|++.......    .............+.  ...+.+++.+|+|+|++++++
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~a~~~~  235 (281)
T 3m1a_A          158 LEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLV--QGSDGSQPGDPAKAAAAIRLA  235 (281)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHH--HC-----CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHH--hhccCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999986543221    000000001111111  122347889999999999999


Q ss_pred             cCCCCCceeecEEEeCCC
Q 023553          251 ASDEARYISGTNLMVDGG  268 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG  268 (280)
                      ++.+.   .|..+.+.++
T Consensus       236 ~~~~~---~~~~~~l~s~  250 (281)
T 3m1a_A          236 LDTEK---TPLRLALGGD  250 (281)
T ss_dssp             HHSSS---CCSEEEESHH
T ss_pred             HhCCC---CCeEEecCch
Confidence            97643   3556665544

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-42  Score=287.27  Aligned_cols=224  Identities=17%  Similarity=0.154  Sum_probs=196.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      ++|++|||||++|||++++++|+++|++|++++|+.+..+         ....++.+|+++++++.++++++.+.+  ++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   72 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGSQ   72 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999999976532         135667899999999999999999999  79


Q ss_pred             ccEEEECCCCCCCCCCCC-CCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           95 LDIMVNNAGISGAPCPDI-READLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|+||||||+...  .++ .+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.++...|++||+
T Consensus        73 id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~  148 (236)
T 1ooe_A           73 VDGVFCVAGGWAG--GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKA  148 (236)
T ss_dssp             EEEEEECCCCCCC--BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             CCEEEECCcccCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHH
Confidence            9999999998754  566 77889999999999999999999999999964  589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHC--CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH-Hh
Q 023553          174 AVLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL-FL  250 (280)
Q Consensus       174 al~~~~~~la~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~-~l  250 (280)
                      |+++|+++++.|++  ++||+|++|+||+++|++.....+...                   ..++.+|+|+|++++ +|
T Consensus       149 a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-------------------~~~~~~~~dvA~~i~~~l  209 (236)
T 1ooe_A          149 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNAD-------------------HSSWTPLSFISEHLLKWT  209 (236)
T ss_dssp             HHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCC-------------------GGGCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCCcc-------------------ccccCCHHHHHHHHHHHH
Confidence            99999999999998  899999999999999998654322110                   034568999999998 55


Q ss_pred             cCCCCCceeecEEEeCCCcccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...+++|+.+.+|||....
T Consensus       210 ~s~~~~~~~G~~~~v~gg~~~~  231 (236)
T 1ooe_A          210 TETSSRPSSGALLKITTENGTS  231 (236)
T ss_dssp             HCGGGCCCTTCEEEEEEETTEE
T ss_pred             cCCCcccccccEEEEecCCCcc
Confidence            5888889999999999997654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-41  Score=285.32  Aligned_cols=248  Identities=28%  Similarity=0.427  Sum_probs=201.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+..   ..++.++.+|++|++++.++++.+.+.
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999998877766666543   246788999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC---CceEEEEccccccccCCCCccc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      ++++|+||||||+..          .++|++.+++|+.+++.+++.++|.|++++   .|+||++||..+..+.++...|
T Consensus        84 ~g~id~lv~~Ag~~~----------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN----------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVY  153 (267)
T ss_dssp             HSCCCEEEECCCCCC----------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHH
T ss_pred             cCCCCEEEECCCCCC----------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchH
Confidence            999999999999752          256899999999999999999999997653   6899999999999998999999


Q ss_pred             hhhHHHHHHHHHHH--HHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          169 TGSKHAVLGLNKNV--AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       169 ~~sK~al~~~~~~l--a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      ++||++++.|++++  +.|++++||+|++|+||+++|++..........  ..............+ ..++++|+|+|++
T Consensus       154 ~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~dvA~~  230 (267)
T 2gdz_A          154 CASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENM--GQYIEYKDHIKDMIK-YYGILDPPLIANG  230 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHH--GGGGGGHHHHHHHHH-HHCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcccccccc--chhhhHHHHHHHHhc-cccCCCHHHHHHH
Confidence            99999999999995  689999999999999999999986543211100  000000000000001 1347799999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCcccccCccc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      +++|+++.  +++|+++.+|||.......|+
T Consensus       231 v~~l~s~~--~~~G~~~~v~gg~~~~~~~~~  259 (267)
T 2gdz_A          231 LITLIEDD--ALNGAIMKITTSKGIHFQDYG  259 (267)
T ss_dssp             HHHHHHCT--TCSSCEEEEETTTEEEECCCC
T ss_pred             HHHHhcCc--CCCCcEEEecCCCcccccCcC
Confidence            99999864  599999999999866554443

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=2.4e-40  Score=277.06  Aligned_cols=226  Identities=33%  Similarity=0.434  Sum_probs=192.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ..+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.   ++.++.+|+++++++.++++++.+.++++
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE---GALPLPGDVREEGDWARAVAAMEEAFGEL   79 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---hceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            357999999999999999999999999999999999888777666553   57788999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++
T Consensus        80 d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  157 (234)
T 2ehd_A           80 SALVNNAGVGVM--KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGL  157 (234)
T ss_dssp             CEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHH
Confidence            999999998754  678889999999999999999999999999999888889999999999999888999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      +.+++.++.|++++||++++|+||+++|++.... +.            .+         ...+|+|+|+++++++++..
T Consensus       158 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~------------~~---------~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          158 LGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT-PG------------QA---------WKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEECC--------------------------------------CCHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc-cc------------cc---------CCCCHHHHHHHHHHHhCCCc
Confidence            9999999999999999999999999999986431 00            00         03699999999999999888


Q ss_pred             CceeecEEEeCCC
Q 023553          256 RYISGTNLMVDGG  268 (280)
Q Consensus       256 ~~~~G~~i~~dgG  268 (280)
                      .+++|+++..+++
T Consensus       216 ~~~~g~~~~~~~~  228 (234)
T 2ehd_A          216 HAMVSEIELRPTR  228 (234)
T ss_dssp             SSCCCEEECCC--
T ss_pred             ccccceEEEeecC
Confidence            8999998766553

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=8e-41  Score=292.58  Aligned_cols=241  Identities=24%  Similarity=0.392  Sum_probs=191.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+..   ...+.++.+|+++++++.++++.+.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999888777666532   2378899999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC------CCceEEEEccccccccCC
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGL  163 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~g~iv~isS~~~~~~~~  163 (280)
                      +.++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|.++      +.|+||++||.++..+.+
T Consensus        83 ~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~  160 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNLF--QPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG  160 (319)
T ss_dssp             HHTCCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS
T ss_pred             HhCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC
Confidence            999999999999999765  789999999999999999999999999999999764      579999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhh-HHHHhhhccCCCCCCCHHH
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVARNANMQGTELTAND  242 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d  242 (280)
                      +...|++||+|+++|+++++.|++++||+|++|+||+|+|++.................. ..............++|++
T Consensus       161 ~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~  240 (319)
T 3ioy_A          161 SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDV  240 (319)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHH
Confidence            999999999999999999999999999999999999999999765322111100000000 0000111111112379999


Q ss_pred             HHHHHHHhcCCCC
Q 023553          243 VANAVLFLASDEA  255 (280)
Q Consensus       243 va~~i~~l~s~~~  255 (280)
                      +|+.++.++....
T Consensus       241 vA~~~~~al~~~~  253 (319)
T 3ioy_A          241 IGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHcCC
Confidence            9999999987644

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=1.1e-41  Score=321.47  Aligned_cols=236  Identities=27%  Similarity=0.410  Sum_probs=188.3

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec---------CcchHHHHHHHhCCCCCeEEEecCCCCHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV---------QDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV   81 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   81 (280)
                      ....+++||++|||||++|||+++|+.|+++|++|++++|         +.+.+++..+++.....  ...+|+++.+++
T Consensus        12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~D~~d~~~~   89 (613)
T 3oml_A           12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG--EAVADYNSVIDG   89 (613)
T ss_dssp             ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC--CEEECCCCGGGH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC--eEEEEeCCHHHH
Confidence            3456799999999999999999999999999999999987         56666666666543221  124799999999


Q ss_pred             HHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc
Q 023553           82 CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG  161 (280)
Q Consensus        82 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~  161 (280)
                      .++++++.+.++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.++..+
T Consensus        90 ~~~~~~~~~~~g~iDiLVnnAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~  167 (613)
T 3oml_A           90 AKVIETAIKAFGRVDILVNNAGILRD--RSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYG  167 (613)
T ss_dssp             HHHHC----------CEECCCCCCCC--CCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHCCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC
Confidence            99999999999999999999999866  7899999999999999999999999999999999888899999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHH
Q 023553          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      .++...|++||+|+++|+++++.|++++||+||+|+||.+ |++.....+...                    .+..+|+
T Consensus       168 ~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~~--------------------~~~~~pe  226 (613)
T 3oml_A          168 NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDIL--------------------FNELKPK  226 (613)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHHH--------------------HTTCCGG
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchhh--------------------hhcCCHH
Confidence            9999999999999999999999999999999999999974 666554433210                    2345899


Q ss_pred             HHHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          242 DVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       242 dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+|++++||+++. .++||+++.+|||+...
T Consensus       227 dvA~~v~~L~s~~-~~~tG~~i~vdGG~~~~  256 (613)
T 3oml_A          227 LIAPVVAYLCHES-CEDNGSYIESAAGWATK  256 (613)
T ss_dssp             GTHHHHHHTTSTT-CCCCSCEEEEETTEEEE
T ss_pred             HHHHHHHHhcCCC-cCCCceEEEECCCeEEE
Confidence            9999999999988 89999999999998753

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=2.7e-41  Score=295.39  Aligned_cols=232  Identities=26%  Similarity=0.408  Sum_probs=199.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec---------CcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV---------QDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   84 (280)
                      ++++||++|||||++|||+++|+.|+++|++|+++++         +.+..++..+++.....  ...+|+++.+++.++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~--~~~~D~~~~~~~~~~   82 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG--KAVANYDSVEAGEKL   82 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC--EEEEECCCGGGHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC--eEEEeCCCHHHHHHH
Confidence            4688999999999999999999999999999999754         55566655555532222  234899999999999


Q ss_pred             HHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC
Q 023553           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        85 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~  164 (280)
                      ++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++
T Consensus        83 ~~~~~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~  160 (319)
T 1gz6_A           83 VKTALDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG  160 (319)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC
Confidence            99999999999999999998765  6788899999999999999999999999999998877899999999999999899


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ...|++||+|++.|++.++.|++++||+||+|+||++ |++.....+..         .           ..+.+|+|+|
T Consensus       161 ~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~---------~-----------~~~~~p~dvA  219 (319)
T 1gz6_A          161 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPED---------L-----------VEALKPEYVA  219 (319)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHH---------H-----------HHHSCGGGTH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCChh---------h-----------hccCCHHHHH
Confidence            9999999999999999999999999999999999998 87754322210         0           1135899999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          245 NAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++++|+++ ..+++|+++.+|||+..
T Consensus       220 ~~~~~l~s~-~~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          220 PLVLWLCHE-SCEENGGLFEVGAGWIG  245 (319)
T ss_dssp             HHHHHHTST-TCCCCSCEEEEETTEEE
T ss_pred             HHHHHHhCc-hhhcCCCEEEECCCeEE
Confidence            999999987 45889999999999764

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-40  Score=283.22  Aligned_cols=246  Identities=27%  Similarity=0.375  Sum_probs=203.5

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHH
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ++.+.++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+.+..   ...+.++.+|+++++++.++++
T Consensus        24 ~~~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~  103 (279)
T 1xg5_A           24 RPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFS  103 (279)
T ss_dssp             CTTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHH
T ss_pred             cccccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHH
Confidence            3334568999999999999999999999999999999999998877766555432   2457888999999999999999


Q ss_pred             HHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCC--ceEEEEcccccc--ccC
Q 023553           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK--GTIISICSVAGA--IGG  162 (280)
Q Consensus        87 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--g~iv~isS~~~~--~~~  162 (280)
                      ++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.  ++||++||..+.  .+.
T Consensus       104 ~~~~~~g~iD~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (279)
T 1xg5_A          104 AIRSQHSGVDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL  181 (279)
T ss_dssp             HHHHHHCCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC
T ss_pred             HHHHhCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC
Confidence            999999999999999998755  67888999999999999999999999999999987663  899999999987  566


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHC--CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCH
Q 023553          163 LGPHAYTGSKHAVLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      ++...|+++|++++.|++.++.|++  ++||++++|+||+++|++...........      .    ..... ..++.+|
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~------~----~~~~~-~~~~~~~  250 (279)
T 1xg5_A          182 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEK------A----AATYE-QMKCLKP  250 (279)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHH------H----HHHHC----CBCH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhH------H----hhhcc-cccCCCH
Confidence            7788999999999999999999998  88999999999999999854332211100      0    01111 2567899


Q ss_pred             HHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          241 NDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       241 ~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      +|+|++++++++....+.+|++...++|
T Consensus       251 ~dvA~~i~~l~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          251 EDVAEAVIYVLSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             HHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             HHHHHHHHHHhcCCcceEeeeEEEccCC
Confidence            9999999999998777878865544443

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=3.8e-41  Score=291.06  Aligned_cols=233  Identities=21%  Similarity=0.209  Sum_probs=189.9

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++++||++|||||++|||+++|+.|+++|++|++++|+.+..++..+.+.  .++.++.+|++++++++++++++   
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~---   84 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA--GQVEVRELDLQDLSSVRRFADGV---   84 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSS--SEEEEEECCTTCHHHHHHHHHTC---
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--CCeeEEEcCCCCHHHHHHHHHhc---
Confidence            4567899999999999999999999999999999999999988887776653  57888999999999998888765   


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC---------
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG---------  162 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~---------  162 (280)
                       +++|+||||||+..+    ..+.+.++|++++++|+.++++++++++|.|.+    +||++||.++..+.         
T Consensus        85 -~~iD~lv~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~  155 (291)
T 3rd5_A           85 -SGADVLINNAGIMAV----PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWR  155 (291)
T ss_dssp             -CCEEEEEECCCCCSC----CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCS
T ss_pred             -CCCCEEEECCcCCCC----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCccccccc
Confidence             799999999998743    356788899999999999999999999999964    89999999987652         


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHHCCCC--eEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCC
Q 023553          163 ----LGPHAYTGSKHAVLGLNKNVAAELGKYG--IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT  236 (280)
Q Consensus       163 ----~~~~~Y~~sK~al~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (280)
                          ++...|++||+|++.|++.++.|++++|  |+|++|+||+++|++.+.......          ....+  .+.++
T Consensus       156 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~----------~~~~~--~~~~~  223 (291)
T 3rd5_A          156 SRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLG----------DALMS--AATRV  223 (291)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-------------------------------
T ss_pred             ccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHH----------HHHHH--HHHHH
Confidence                3456899999999999999999999887  999999999999999766422110          00011  12244


Q ss_pred             CCC-HHHHHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          237 ELT-ANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       237 ~~~-~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +.. |+|+|+++++|+++  .+++|+++.+|||+...
T Consensus       224 ~~~~~~~~A~~~~~l~~~--~~~~G~~~~vdgG~~~~  258 (291)
T 3rd5_A          224 VATDADFGARQTLYAASQ--DLPGDSFVGPRFGYLGR  258 (291)
T ss_dssp             -CHHHHHHHHHHHHHHHS--CCCTTCEEEETTSSSSC
T ss_pred             HhCCHHHHHHHHHHHHcC--CCCCCceeCCcccccCc
Confidence            444 99999999999987  48999999999998753

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-40  Score=276.94  Aligned_cols=224  Identities=19%  Similarity=0.195  Sum_probs=192.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC-
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   93 (280)
                      ++|+++||||++|||+++++.|+++|  ++|++++|+.+..+++.+ + ...++.++.+|+++++++.++++++.++++ 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c-cCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999999  999999999887766533 2 245788999999999999999999999998 


Q ss_pred             -CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC------C-----CceEEEEcccccccc
Q 023553           94 -TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ------T-----KGTIISICSVAGAIG  161 (280)
Q Consensus        94 -~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~g~iv~isS~~~~~~  161 (280)
                       ++|+||||||+..+ ..++.+.+.++|++.+++|+.+++.++++++|.|+++      +     .++||++||..+..+
T Consensus        80 ~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  158 (250)
T 1yo6_A           80 DGLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GCCCEEEECCCCCCC-BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCcEEEECCcccCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence             99999999998762 2678889999999999999999999999999999765      4     689999999999877


Q ss_pred             C-------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCC
Q 023553          162 G-------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ  234 (280)
Q Consensus       162 ~-------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (280)
                      .       ++...|++||++++.|++.++.+++++||++++|+||+++|++...                          
T Consensus       159 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------------  212 (250)
T 1yo6_A          159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------------------------  212 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------
T ss_pred             CcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC--------------------------
Confidence            6       5778999999999999999999999999999999999999998532                          


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       235 ~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ..+.+|+|+|+.++++++....+++|+++.+|||.
T Consensus       213 ~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          213 NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             ------HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            13468999999999999988788999999999985

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.9e-40  Score=275.15  Aligned_cols=230  Identities=30%  Similarity=0.440  Sum_probs=195.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++|++|||||++|||++++++|+++|++|++++|+.+ .          .++.++.+|+++++++.++++++ +.++++|
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d   68 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G----------EDLIYVEGDVTREEDVRRAVARA-QEEAPLF   68 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S----------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c----------cceEEEeCCCCCHHHHHHHHHHH-HhhCCce
Confidence            3789999999999999999999999999999999875 1          13478899999999999999999 8889999


Q ss_pred             EEEECCCCCCCCCCCCCCCC----HHHHHHHhhhhhhhHHHHHHHHHHhcccCC---C---ceEEEEccccccccCCCCc
Q 023553           97 IMVNNAGISGAPCPDIREAD----LSEFEKVFDINVKGVFHGMKHAARIMIPQT---K---GTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~---g~iv~isS~~~~~~~~~~~  166 (280)
                      ++|||||....  ..+.+.+    .++|++.+++|+.+++.++++++|.|.+++   .   ++||++||..+..+.++..
T Consensus        69 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  146 (242)
T 1uay_A           69 AVVSAAGVGLA--EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQA  146 (242)
T ss_dssp             EEEECCCCCCC--CCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCH
T ss_pred             EEEEcccccCc--ccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCc
Confidence            99999998755  4455444    459999999999999999999999997654   3   4999999999999989999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||++++.+++.++.|++++||++++|+||+++|++.....+.          +........++.+++.+|+|+|++
T Consensus       147 ~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~dva~~  216 (242)
T 1uay_A          147 AYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEK----------AKASLAAQVPFPPRLGRPEEYAAL  216 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHH----------HHHHHHTTCCSSCSCCCHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchh----------HHHHHHhhCCCcccCCCHHHHHHH
Confidence            9999999999999999999999999999999999999987653211          111111222222788999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCcccc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++++++.  .+++|+.+.+|||+...
T Consensus       217 ~~~l~~~--~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          217 VLHILEN--PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHHHC--TTCCSCEEEESTTCCCC
T ss_pred             HHHHhcC--CCCCCcEEEEcCCeecC
Confidence            9999976  78999999999998653

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=7.4e-40  Score=277.46  Aligned_cols=233  Identities=21%  Similarity=0.226  Sum_probs=192.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcc--hHHHHHHHhCCCCCeEEEecCCCCH-HHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDN--LGQQVCQSLGGEPDTFFCHCDVTKE-EDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~   90 (280)
                      ++++|+++||||++|||+++|++|+++|++ |++++|+.+  ..+++.+.. ...++.++.+|++++ +++.++++++.+
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN-PKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC-TTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhC-CCceEEEEEEecCCChHHHHHHHHHHHH
Confidence            578999999999999999999999999997 999999863  333333322 234678899999998 999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC---CceEEEEccccccccCCCCcc
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~isS~~~~~~~~~~~~  167 (280)
                      .++++|++|||||+.          +.++|++.+++|+.++++++++++|.|.+++   .|+||++||.++..+.++...
T Consensus        81 ~~g~id~lv~~Ag~~----------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (254)
T 1sby_A           81 QLKTVDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV  150 (254)
T ss_dssp             HHSCCCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred             hcCCCCEEEECCccC----------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchH
Confidence            999999999999974          2357899999999999999999999997654   589999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |++||++++.|++.++.+++++||+|++|+||+++|++...........    .....+...     ..+.+|+|+|+++
T Consensus       151 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~----~~~~~~~~~-----~~~~~~~dvA~~i  221 (254)
T 1sby_A          151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVE----PRVAELLLS-----HPTQTSEQCGQNF  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSC----TTHHHHHTT-----SCCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhh----HHHHHHHhc-----CCCCCHHHHHHHH
Confidence            9999999999999999999888999999999999999876432110000    001111111     2345899999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCcc
Q 023553          248 LFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++++   .+.+|+++.+|||+.
T Consensus       222 ~~~~~---~~~~G~~~~v~gG~~  241 (254)
T 1sby_A          222 VKAIE---ANKNGAIWKLDLGTL  241 (254)
T ss_dssp             HHHHH---HCCTTCEEEEETTEE
T ss_pred             HHHHH---cCCCCCEEEEeCCce
Confidence            99995   478999999999964

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1.4e-40  Score=293.42  Aligned_cols=247  Identities=12%  Similarity=-0.006  Sum_probs=200.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecCcchHH------------HHHHHhC-CCCCeEEEecCCCCHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQ------------QVCQSLG-GEPDTFFCHCDVTKEEDV   81 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~-~g~~Vi~~~r~~~~~~------------~~~~~~~-~~~~~~~~~~D~~~~~~~   81 (280)
                      ..+|++|||||++|||+++|+.|++ +|++|++++++.+..+            ...+.+. ....+..+.+|+++++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            5699999999999999999999999 9999999988754321            1122221 235678899999999999


Q ss_pred             HHHHHHHHHHhCCccEEEECCCCCCC-----------CCCCC---------------------CCCCHHHHHHHhhhhhh
Q 023553           82 CSAVDLTVEKFGTLDIMVNNAGISGA-----------PCPDI---------------------READLSEFEKVFDINVK  129 (280)
Q Consensus        82 ~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~n~~  129 (280)
                      .++++++.+.+|++|+||||||+...           ...++                     .+.+.++|++++++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            99999999999999999999998510           11444                     77899999999999999


Q ss_pred             hHH-HHHHHHHHh-cccCCCceEEEEccccccccCCCC--ccchhhHHHHHHHHHHHHHHHCCC-CeEEEEEeCCceecc
Q 023553          130 GVF-HGMKHAARI-MIPQTKGTIISICSVAGAIGGLGP--HAYTGSKHAVLGLNKNVAAELGKY-GIRVNCVSPYAVATG  204 (280)
Q Consensus       130 ~~~-~l~~~~~~~-l~~~~~g~iv~isS~~~~~~~~~~--~~Y~~sK~al~~~~~~la~e~~~~-gi~v~~v~pg~v~t~  204 (280)
                      +.+ .+++++.+. |+ .++|+||++||..+..+.+..  ..|++||+|+++|+++||.||+++ |||||+|+||++.|+
T Consensus       205 ~~~~~~~~~~~~~~m~-~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~  283 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVL-AEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ  283 (405)
T ss_dssp             HHHHHHHHHHHHHTCE-EEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred             hHHHHHHHHHHHHhhh-hCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence            998 788887754 54 346999999999999998887  999999999999999999999999 999999999999999


Q ss_pred             ccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccccCccc
Q 023553          205 LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      +.......+ ..       .....+   +.++++.|||+++++.+|+++   ++.|..+.+|++.+.---.|+
T Consensus       284 ~s~~ip~~p-~y-------~~~l~~---~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r~d~~e  342 (405)
T 3zu3_A          284 ASSAIPMMP-LY-------LSLLFK---VMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLRADYKE  342 (405)
T ss_dssp             HHHTSTTHH-HH-------HHHHHH---HHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEECCHHH
T ss_pred             hhhcCCCCc-HH-------HHHHHH---HHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCCCchhh
Confidence            976653321 11       111111   237788999999999999976   678899999998765444443

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=3.2e-40  Score=293.73  Aligned_cols=251  Identities=13%  Similarity=0.023  Sum_probs=198.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecCcchHHH------------HHHHhC-CCCCeEEEecCCCCHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQQ------------VCQSLG-GEPDTFFCHCDVTKEEDV   81 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~-~g~~Vi~~~r~~~~~~~------------~~~~~~-~~~~~~~~~~D~~~~~~~   81 (280)
                      ..+|++|||||++|||+++|+.|++ .|++|++++|+.+..++            ..+.+. ....+..+.+|+++++++
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            3599999999999999999999999 99999999988654321            112222 235678899999999999


Q ss_pred             HHHHHHHHHHh-CCccEEEECCCCCC-----------CCCCCC---------------------CCCCHHHHHHHhhhhh
Q 023553           82 CSAVDLTVEKF-GTLDIMVNNAGISG-----------APCPDI---------------------READLSEFEKVFDINV  128 (280)
Q Consensus        82 ~~~~~~~~~~~-g~id~li~~ag~~~-----------~~~~~~---------------------~~~~~~~~~~~~~~n~  128 (280)
                      .++++.+.+.+ |+||+||||||+..           ....++                     .+.+.++|++++++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence            99999999999 99999999999730           011334                     3689999999999999


Q ss_pred             hhHH-HHHHHHHHhcccCCCceEEEEccccccccCCCC--ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccc
Q 023553          129 KGVF-HGMKHAARIMIPQTKGTIISICSVAGAIGGLGP--HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL  205 (280)
Q Consensus       129 ~~~~-~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~--~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  205 (280)
                      .+.+ .+++++.+.+...++|+||++||..+..+.+..  ..|++||+|+.+|+++||.|++++|||||+|+||+++|++
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence            9987 788888765433446999999999999887766  8999999999999999999999999999999999999999


Q ss_pred             cccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCcee-ecEEEeCCCcccccCcccc
Q 023553          206 ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYIS-GTNLMVDGGFTSVNHSLRV  278 (280)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~-G~~i~~dgG~~~~~~~~~~  278 (280)
                      .......+ ..       .....+   +.++.+.|||+++++.+|+++.- |.+ |+...+|++..+----|++
T Consensus       299 ~~~ip~~~-~~-------~~~~~~---~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~r~d~~e~  360 (422)
T 3s8m_A          299 SAAIPVMP-LY-------ISMVYK---IMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRLRLDDWEL  360 (422)
T ss_dssp             GGGSTHHH-HH-------HHHHHH---HHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCEESCTTTT
T ss_pred             hhcCCCCh-HH-------HHHHHh---hhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCCccchhhC
Confidence            76543211 10       111111   23788999999999999998643 665 7777699987765444543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-39  Score=276.93  Aligned_cols=234  Identities=18%  Similarity=0.158  Sum_probs=199.5

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcC---CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHH
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHG---AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g---~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      .+...++++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+.+......++.++.+|++++++++++++
T Consensus        13 ~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   92 (267)
T 1sny_A           13 GLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVA   92 (267)
T ss_dssp             -------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHH
T ss_pred             cccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHH
Confidence            334466899999999999999999999999999   99999999987655433222223478899999999999999999


Q ss_pred             HHHHHhC--CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC------C-----CceEEEE
Q 023553           87 LTVEKFG--TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ------T-----KGTIISI  153 (280)
Q Consensus        87 ~~~~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~g~iv~i  153 (280)
                      ++.+.++  ++|+||||||+... ..++.+.+.++|++.+++|+.+++.++++++|.|.++      +     .++||++
T Consensus        93 ~~~~~~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i  171 (267)
T 1sny_A           93 DIEGVTKDQGLNVLFNNAGIAPK-SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM  171 (267)
T ss_dssp             HHHHHHGGGCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred             HHHHhcCCCCccEEEECCCcCCC-ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence            9999998  89999999998762 1678889999999999999999999999999999765      3     5899999


Q ss_pred             ccccccccCC---CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh
Q 023553          154 CSVAGAIGGL---GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       154 sS~~~~~~~~---~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                      ||..+..+.+   +...|++||++++.|++.++.+++++||++++|+||+++|++...                      
T Consensus       172 sS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------  229 (267)
T 1sny_A          172 SSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS----------------------  229 (267)
T ss_dssp             CCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT----------------------
T ss_pred             ecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC----------------------
Confidence            9999887753   677899999999999999999999999999999999999998532                      


Q ss_pred             ccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          231 ANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       231 ~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                          ....+|+++|+.++++++.....++|+++.+|||..
T Consensus       230 ----~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          230 ----SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             ----TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred             ----CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence                134689999999999998878889999999999863

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=2e-39  Score=284.11  Aligned_cols=249  Identities=21%  Similarity=0.230  Sum_probs=187.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-----cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-----DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~-----~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++++|+++||||++|||+++|+.|+++|++|++++|+     .+.++++.+.+.. ..++.++.+|++|++++.++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            3578999999999999999999999999999998776     3344444433322 357889999999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-CCCCcc
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-GLGPHA  167 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-~~~~~~  167 (280)
                      .+++|++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+ .++...
T Consensus        82 ~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~  159 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVF--GPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAP  159 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHH
T ss_pred             HHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchh
Confidence            9999999999999998765  7889999999999999999999999999999998888899999999999854 466789


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCC---Ccchhhhhhhh------hhHHHHhhhccCCCCCC
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHL---PEEERTEDAMV------GFRNFVARNANMQGTEL  238 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~~~~~~  238 (280)
                      |++||+|+++|+++++.|++++||+|++|+||+++|++.....   +..........      ...........+.....
T Consensus       160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (324)
T 3u9l_A          160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDA  239 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999999999999999987753221   11110000000      00011111112223457


Q ss_pred             CHHHHHHHHHHhcCCCCCceeecEEEeC
Q 023553          239 TANDVANAVLFLASDEARYISGTNLMVD  266 (280)
Q Consensus       239 ~~~dva~~i~~l~s~~~~~~~G~~i~~d  266 (280)
                      +|+++|++++.++..... .....+.++
T Consensus       240 ~p~~vA~aiv~~~~~~~~-~~~~~~~~g  266 (324)
T 3u9l_A          240 DVSLVADAIVRVVGTASG-KRPFRVHVD  266 (324)
T ss_dssp             CTHHHHHHHHHHHTSCTT-CCCSEEEEC
T ss_pred             CHHHHHHHHHHHhcCCCC-CCCeEEEeC
Confidence            899999999999865421 234556665

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=4.7e-40  Score=277.27  Aligned_cols=217  Identities=21%  Similarity=0.247  Sum_probs=157.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|++|||||++|||+++|+.|++ |+.|++++|+.+.+++..+    ...+.++.+|+++.++ .+.+.+..+.+++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~   75 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----IEGVEPIESDIVKEVL-EEGGVDKLKNLDH   75 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----STTEEEEECCHHHHHH-TSSSCGGGTTCSC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----hcCCcceecccchHHH-HHHHHHHHHhcCC
Confidence            57899999999999999999999998 9999999999887776654    2357889999998877 4445555566789


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.++...|++||+|
T Consensus        76 id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a  152 (245)
T 3e9n_A           76 VDTLVHAAAVARD--TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHA  152 (245)
T ss_dssp             CSEEEECC------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHH
T ss_pred             CCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHH
Confidence            9999999999865  7788899999999999999999999999999997654 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      ++.|+++++.|++++||+|++|+||+++|++..........               ....+++.+|+|+|+++++|++..
T Consensus       153 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---------------~~~~~~~~~p~dvA~~i~~l~~~~  217 (245)
T 3e9n_A          153 LRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGT---------------NFRPEIYIEPKEIANAIRFVIDAG  217 (245)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------CCGGGSCHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhhc---------------ccccccCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999987665432111               011256789999999999999765


Q ss_pred             C
Q 023553          255 A  255 (280)
Q Consensus       255 ~  255 (280)
                      .
T Consensus       218 ~  218 (245)
T 3e9n_A          218 E  218 (245)
T ss_dssp             T
T ss_pred             C
Confidence            4

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.9e-39  Score=273.90  Aligned_cols=221  Identities=27%  Similarity=0.403  Sum_probs=194.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++.. ..++.++.+|+++++++.++++++.+.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999998877766655532 347888999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++|
T Consensus       106 ~g~iD~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  183 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSS  183 (272)
T ss_dssp             TCCCSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHH
T ss_pred             CCCCcEEEECCCcCCC--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHH
Confidence            9999999999998765  67788889999999999999999999999999988888999999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHHC---CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          172 KHAVLGLNKNVAAELG---KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       172 K~al~~~~~~la~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      |++++.|++.++.|++   +.||+|++|+||+++|++....             ...        .+++.+|+|+|++++
T Consensus       184 K~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~-------------~~~--------~~~~~~~~dva~~i~  242 (272)
T 1yb1_A          184 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-------------STS--------LGPTLEPEEVVNRLM  242 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-------------HHH--------HCCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc-------------ccc--------ccCCCCHHHHHHHHH
Confidence            9999999999999996   6799999999999999984320             000        167889999999999


Q ss_pred             HhcCCCCC
Q 023553          249 FLASDEAR  256 (280)
Q Consensus       249 ~l~s~~~~  256 (280)
                      +++.....
T Consensus       243 ~~~~~~~~  250 (272)
T 1yb1_A          243 HGILTEQK  250 (272)
T ss_dssp             HHHHTTCS
T ss_pred             HHHHcCCC
Confidence            99976544

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=2.8e-38  Score=274.81  Aligned_cols=221  Identities=26%  Similarity=0.335  Sum_probs=187.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCH-HHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKE-EDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~-~~~~~~~~~~~~~   91 (280)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++...  .++.++.+|++++ ++++++++.+.+.
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999998888777776432  4788999999998 9999999999999


Q ss_pred             hCCccEEEECCCCCCCC----------------------------CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcc
Q 023553           92 FGTLDIMVNNAGISGAP----------------------------CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI  143 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~----------------------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~  143 (280)
                      ++++|+||||||+....                            ...+.+.+.++|++.+++|+.+++.++++++|.|+
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence            99999999999987420                            02456778999999999999999999999999998


Q ss_pred             cCCCceEEEEccccccccC-------------------------------------------CCCccchhhHHHHHHHHH
Q 023553          144 PQTKGTIISICSVAGAIGG-------------------------------------------LGPHAYTGSKHAVLGLNK  180 (280)
Q Consensus       144 ~~~~g~iv~isS~~~~~~~-------------------------------------------~~~~~Y~~sK~al~~~~~  180 (280)
                      +++.++||++||..+..+.                                           ++...|++||+|++.|++
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  248 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR  248 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHH
Confidence            8888999999999887653                                           355789999999999999


Q ss_pred             HHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceee
Q 023553          181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG  260 (280)
Q Consensus       181 ~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G  260 (280)
                      .++.++++  |+|++|+||+|+|++.+...                          ..++++.++.+++++.......+|
T Consensus       249 ~la~e~~~--i~v~~v~PG~v~T~~~~~~~--------------------------~~~~~~~a~~~~~~~~~~~~~~~g  300 (311)
T 3o26_A          249 VLANKIPK--FQVNCVCPGLVKTEMNYGIG--------------------------NYTAEEGAEHVVRIALFPDDGPSG  300 (311)
T ss_dssp             HHHHHCTT--SEEEEECCCSBCSGGGTTCC--------------------------SBCHHHHHHHHHHHHTCCSSCCCS
T ss_pred             HHHhhcCC--ceEEEecCCceecCCcCCCC--------------------------CCCHHHHHHHHHHHHhCCCCCCCc
Confidence            99999965  99999999999999865432                          237899999999988755444455


Q ss_pred             cEE
Q 023553          261 TNL  263 (280)
Q Consensus       261 ~~i  263 (280)
                      ..+
T Consensus       301 ~~~  303 (311)
T 3o26_A          301 FFY  303 (311)
T ss_dssp             CEE
T ss_pred             eEe
Confidence            444

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=5.1e-39  Score=282.02  Aligned_cols=243  Identities=20%  Similarity=0.226  Sum_probs=186.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH---HHHHHh----CCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ---QVCQSL----GGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~---~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ++|++|||||++|||+++|++|+++|++|++++|+....+   +..+..    ....++.++.+|+++++++.++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            4799999999999999999999999999988887654332   222222    112578889999999999999999873


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                        ++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.++...|+
T Consensus        81 --~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  156 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC  156 (327)
T ss_dssp             --TSCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             --cCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHH
Confidence              5899999999998754  678889999999999999999999999999999877789999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhh-----hhhhhhhHHHHhhhccCCCCC-CCHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT-----EDAMVGFRNFVARNANMQGTE-LTANDV  243 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~dv  243 (280)
                      +||+|+++|++.++.|++++||+|++|+||+++|++...........     ......+..+......+.+++ .+|+|+
T Consensus       157 aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  236 (327)
T 1jtv_A          157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEV  236 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHH
Confidence            99999999999999999999999999999999999976543221100     000000111111000011233 589999


Q ss_pred             HHHHHHhcCC---CCCceeecEE
Q 023553          244 ANAVLFLASD---EARYISGTNL  263 (280)
Q Consensus       244 a~~i~~l~s~---~~~~~~G~~i  263 (280)
                      |++++++++.   ..+|++|+.+
T Consensus       237 A~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          237 AEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHcCCCCCeEEEeCchH
Confidence            9999999874   3457777653

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1.2e-39  Score=276.46  Aligned_cols=221  Identities=25%  Similarity=0.358  Sum_probs=174.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      |++|||||++|||+++++.|+++|++|++++|+.+..+.         .   +.+|+++.++++++++++   .+++|+|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~---~~~Dl~~~~~v~~~~~~~---~~~id~l   66 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------D---LSTAEGRKQAIADVLAKC---SKGMDGL   66 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------C---TTSHHHHHHHHHHHHTTC---TTCCSEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------c---cccCCCCHHHHHHHHHHh---CCCCCEE
Confidence            789999999999999999999999999999998765321         1   568999999988777632   2899999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-------------------
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-------------------  159 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-------------------  159 (280)
                      |||||+....         +.|++.+++|+.+++.++++++|.|++++.++||++||..+.                   
T Consensus        67 v~~Ag~~~~~---------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           67 VLCAGLGPQT---------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EECCCCCTTC---------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EECCCCCCCc---------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence            9999986421         228999999999999999999999988778999999999987                   


Q ss_pred             ---------ccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh
Q 023553          160 ---------IGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       160 ---------~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                               .+.++...|++||+|++.|++.++.|++++||+|++|+||+++|++.........        ...+....
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~  209 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR--------YGESIAKF  209 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------------C
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchh--------HHHHHHhc
Confidence                     3444678999999999999999999999999999999999999998765422110        01111111


Q ss_pred             ccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          231 ANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       231 ~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ..+.+++.+|+|+|+++++|+++...+++|+.+.+|||+..
T Consensus       210 ~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          210 VPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             ccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            23347899999999999999998888999999999999754

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=2.7e-38  Score=283.36  Aligned_cols=250  Identities=12%  Similarity=0.018  Sum_probs=200.8

Q ss_pred             cCCcEEEEEcCCChHHHH--HHHHHHHcCCeEEEEecCcch------------HHHHHHHhC-CCCCeEEEecCCCCHHH
Q 023553           16 LVGRVALITGGATGIGES--TVRLFHKHGAKVCIADVQDNL------------GQQVCQSLG-GEPDTFFCHCDVTKEED   80 (280)
Q Consensus        16 l~~k~vlItGas~giG~~--ia~~l~~~g~~Vi~~~r~~~~------------~~~~~~~~~-~~~~~~~~~~D~~~~~~   80 (280)
                      +.+|++|||||++|||++  +++.|+++|++|++++|+.+.            .+...+... ....+..+.||++++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            679999999999999999  999999999999999987543            122222222 23568889999999999


Q ss_pred             HHHHHHHHHHHhCCccEEEECCCCCCC-----------CCCCC---------------------CCCCHHHHHHHhhhhh
Q 023553           81 VCSAVDLTVEKFGTLDIMVNNAGISGA-----------PCPDI---------------------READLSEFEKVFDINV  128 (280)
Q Consensus        81 ~~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~n~  128 (280)
                      ++++++++.+.+|+||+||||||....           ...++                     .+.+.++|++.+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            999999999999999999999997410           01233                     4679999999999999


Q ss_pred             hhHH-HHHHHHHHhcccCCCceEEEEccccccccCCCC--ccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCceecc
Q 023553          129 KGVF-HGMKHAARIMIPQTKGTIISICSVAGAIGGLGP--HAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATG  204 (280)
Q Consensus       129 ~~~~-~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~--~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~t~  204 (280)
                      .+.+ .+++.+++.+...+.|+||++||..+..+.+.+  ..|++||+|+++|+++|+.|+++ +|||||+|+||+++|+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            9888 778888776544557999999999999998888  99999999999999999999999 9999999999999999


Q ss_pred             ccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccccCcccc
Q 023553          205 LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRV  278 (280)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~  278 (280)
                      +..........        .....+   +.++.+.+|++++.+.+|+++  .+.+|+.+.+|||...---.|++
T Consensus       298 ~s~~ip~~p~y--------~~~~~~---~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r~d~~e~  358 (418)
T 4eue_A          298 ASAYIPTFPLY--------AAILYK---VMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLRMDDLEL  358 (418)
T ss_dssp             HHHTSTTHHHH--------HHHHHH---HHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEESCTTTT
T ss_pred             hhhcCCCCcHH--------HHHHHH---HHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceeeCChhhc
Confidence            97765332111        011111   125568899999999999976  56789999999977665555554

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=7.9e-37  Score=260.95  Aligned_cols=221  Identities=24%  Similarity=0.280  Sum_probs=188.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~-~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++|++|||||++|||+++++.|++ .|++|++++|+.+..++..+.+.. ..++.++.+|+++.+++.++++++.+.++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3689999999999999999999999 999999999998877766665532 24678899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCC-HHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------
Q 023553           94 TLDIMVNNAGISGAPCPDIREAD-LSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------  161 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-----------  161 (280)
                      ++|+||||||+...  .. ...+ .+++++.+++|+.+++++++.++|.|++  .|+||++||..+..+           
T Consensus        82 ~id~li~~Ag~~~~--~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~  156 (276)
T 1wma_A           82 GLDVLVNNAGIAFK--VA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQK  156 (276)
T ss_dssp             SEEEEEECCCCCCC--TT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             CCCEEEECCccccc--CC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhh
Confidence            99999999998754  22 3344 5899999999999999999999999865  489999999877632           


Q ss_pred             ------------------------------CCCCccchhhHHHHHHHHHHHHHHHCC----CCeEEEEEeCCceeccccc
Q 023553          162 ------------------------------GLGPHAYTGSKHAVLGLNKNVAAELGK----YGIRVNCVSPYAVATGLAL  207 (280)
Q Consensus       162 ------------------------------~~~~~~Y~~sK~al~~~~~~la~e~~~----~gi~v~~v~pg~v~t~~~~  207 (280)
                                                    ..+...|++||++++.|++.++.++++    +||+|++|+||+++|++..
T Consensus       157 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~  236 (276)
T 1wma_A          157 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  236 (276)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             ccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC
Confidence                                          012379999999999999999999987    7999999999999999854


Q ss_pred             cCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC--CCceeecEEEeCCC
Q 023553          208 AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE--ARYISGTNLMVDGG  268 (280)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~--~~~~~G~~i~~dgG  268 (280)
                      .                          .++.+|+|+|+++++|++.+  ..+++|+++. +++
T Consensus       237 ~--------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          237 P--------------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             T--------------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             c--------------------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence            2                          23569999999999999854  3689999998 554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=1.7e-36  Score=261.21  Aligned_cols=218  Identities=17%  Similarity=0.201  Sum_probs=186.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++..  ..++.++.+|+++++++.++++++.+.
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998887776655432  236788999999999999999999999


Q ss_pred             hCCccEEEEC-CCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           92 FGTLDIMVNN-AGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|++||| +|+..   ..+.+.+.++|++.+++|+.+++.++++++|.|.+. .|+||++||.++..+.++...|++
T Consensus       104 ~g~iD~li~naag~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  179 (286)
T 1xu9_A          104 MGGLDMLILNHITNTS---LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSA  179 (286)
T ss_dssp             HTSCSEEEECCCCCCC---CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             cCCCCEEEECCccCCC---CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHH
Confidence            9999999999 56643   345567899999999999999999999999998643 589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHH--CCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       171 sK~al~~~~~~la~e~--~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ||++++.|+++++.|+  ...||++++|+||+++|++........                .   .....+|+|+|+.++
T Consensus       180 sK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~----------------~---~~~~~~~~~vA~~i~  240 (286)
T 1xu9_A          180 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI----------------V---HMQAAPKEECALEII  240 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG----------------G---GGGCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcccc----------------c---cCCCCCHHHHHHHHH
Confidence            9999999999999999  678999999999999999865322110                0   023568999999999


Q ss_pred             HhcCCC
Q 023553          249 FLASDE  254 (280)
Q Consensus       249 ~l~s~~  254 (280)
                      ..+...
T Consensus       241 ~~~~~~  246 (286)
T 1xu9_A          241 KGGALR  246 (286)
T ss_dssp             HHHHTT
T ss_pred             HHHhcC
Confidence            988654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.2e-35  Score=300.29  Aligned_cols=241  Identities=20%  Similarity=0.264  Sum_probs=197.3

Q ss_pred             ccccCCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHh----CC-CCCeEEEecCCCCHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATG-IGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSL----GG-EPDTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus        13 ~~~l~~k~vlItGas~g-iG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~   85 (280)
                      .++++||++|||||++| ||+++|+.|+++|++|+++ .|+.+..++..+.+    .. ..++.++.||+++.+++.+++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            34689999999999998 9999999999999999998 56666655444333    22 356888999999999999999


Q ss_pred             HHHHHH-----hC-CccEEEECCCCCCCCCC-CCCCCC--HHHHHHHhhhhhhhHHHHHHHH--HHhcccCCCceEEEEc
Q 023553           86 DLTVEK-----FG-TLDIMVNNAGISGAPCP-DIREAD--LSEFEKVFDINVKGVFHGMKHA--ARIMIPQTKGTIISIC  154 (280)
Q Consensus        86 ~~~~~~-----~g-~id~li~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~g~iv~is  154 (280)
                      +++.+.     +| +||+||||||+...  . ++.+.+  .++|++++++|+.+++.+++.+  +|.|.+++.|+||++|
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~--~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnIS  827 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  827 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCC--SBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEEC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCC--CCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEc
Confidence            999988     66 99999999998754  5 788888  8999999999999999999998  7888777779999999


Q ss_pred             cccccccCCCCccchhhHHHHHHH-HHHHHHHHCCCCeEEEEEeCCcee-ccccccCCCcchhhhhhhhhhHHHHhhhcc
Q 023553          155 SVAGAIGGLGPHAYTGSKHAVLGL-NKNVAAELGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVARNAN  232 (280)
Q Consensus       155 S~~~~~~~~~~~~Y~~sK~al~~~-~~~la~e~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (280)
                      |..+..+  +...|++||+|+++| ++.++.+++++ |+||+|+||+++ |+|.....   .        ......+ .+
T Consensus       828 S~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~---~--------~~~~~~~-~p  892 (1887)
T 2uv8_A          828 PNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANN---I--------IAEGIEK-MG  892 (1887)
T ss_dssp             SCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CC---T--------THHHHHT-TS
T ss_pred             ChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccch---h--------HHHHHHh-cC
Confidence            9999877  678999999999999 99999999888 999999999999 88865310   0        0111111 11


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCC-CCceeecEEEeC--CCcccc
Q 023553          233 MQGTELTANDVANAVLFLASDE-ARYISGTNLMVD--GGFTSV  272 (280)
Q Consensus       233 ~~~~~~~~~dva~~i~~l~s~~-~~~~~G~~i~~d--gG~~~~  272 (280)
                        .++.+|+|+|+++++|+++. ..+++|+.+.+|  ||+...
T Consensus       893 --lr~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~  933 (1887)
T 2uv8_A          893 --VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  933 (1887)
T ss_dssp             --CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTS
T ss_pred             --CCCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeecc
Confidence              15669999999999999976 679999999875  997654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=1e-34  Score=237.41  Aligned_cols=200  Identities=17%  Similarity=0.140  Sum_probs=175.0

Q ss_pred             Cc-EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           18 GR-VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k-~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +| +++||||+++||++++++|+ +|++|++++|+.+                ++.+|++++++++++++.+    +++|
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------~~~~D~~~~~~~~~~~~~~----~~~d   60 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------DVTVDITNIDSIKKMYEQV----GKVD   60 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------SEECCTTCHHHHHHHHHHH----CCEE
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------ceeeecCCHHHHHHHHHHh----CCCC
Confidence            44 79999999999999999999 9999999999865                3679999999998888754    7999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||....  .++.+.+.++|++.+++|+.+++.+++++.+.|.+  .++||++||..+..+.++...|+++|++++
T Consensus        61 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~  136 (202)
T 3d7l_A           61 AIVSATGSATF--SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVT  136 (202)
T ss_dssp             EEEECCCCCCC--CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHH
Confidence            99999998754  67888999999999999999999999999999854  389999999999999899999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~  256 (280)
                      .+++.++.|+ ++||++++++||++.|++....                   . ..+..++++++|+|++++++++   .
T Consensus       137 ~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~-------------------~-~~~~~~~~~~~dva~~~~~~~~---~  192 (202)
T 3d7l_A          137 AFAKSAAIEM-PRGIRINTVSPNVLEESWDKLE-------------------P-FFEGFLPVPAAKVARAFEKSVF---G  192 (202)
T ss_dssp             HHHHHHTTSC-STTCEEEEEEECCBGGGHHHHG-------------------G-GSTTCCCBCHHHHHHHHHHHHH---S
T ss_pred             HHHHHHHHHc-cCCeEEEEEecCccCCchhhhh-------------------h-hccccCCCCHHHHHHHHHHhhh---c
Confidence            9999999999 7899999999999999974210                   0 0112578899999999999883   4


Q ss_pred             ceeecEEEeC
Q 023553          257 YISGTNLMVD  266 (280)
Q Consensus       257 ~~~G~~i~~d  266 (280)
                      +.+|+.+++|
T Consensus       193 ~~~G~~~~vd  202 (202)
T 3d7l_A          193 AQTGESYQVY  202 (202)
T ss_dssp             CCCSCEEEEC
T ss_pred             cccCceEecC
Confidence            7899999987

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.3e-36  Score=295.82  Aligned_cols=243  Identities=20%  Similarity=0.244  Sum_probs=200.5

Q ss_pred             cccccCCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-----CCCeEEEecCCCCHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATG-IGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-----EPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~g-iG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~   84 (280)
                      +.++++||++|||||++| ||+++|+.|+++|++|+++ +|+.+.+++..+++..     ..++.++.||+++.+++.++
T Consensus       470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            345689999999999998 9999999999999999998 5666665555555421     24688899999999999999


Q ss_pred             HHHHHHH-----hC-CccEEEECCCCCCCCCC-CCCCCC--HHHHHHHhhhhhhhHHHHHHHH--HHhcccCCCceEEEE
Q 023553           85 VDLTVEK-----FG-TLDIMVNNAGISGAPCP-DIREAD--LSEFEKVFDINVKGVFHGMKHA--ARIMIPQTKGTIISI  153 (280)
Q Consensus        85 ~~~~~~~-----~g-~id~li~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~g~iv~i  153 (280)
                      ++++.+.     +| ++|+||||||+...  . ++.+.+  .++|++++++|+.+++.+++.+  +|.|++++.|+||++
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~~--g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnI  627 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPM  627 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCCCC--SBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCC
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCC--CCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEE
Confidence            9999988     77 99999999998754  5 788888  8999999999999999999999  889977777899999


Q ss_pred             ccccccccCCCCccchhhHHHHHHH-HHHHHHHHCCCCeEEEEEeCCcee-ccccccCCCcchhhhhhhhhhHHHHhhhc
Q 023553          154 CSVAGAIGGLGPHAYTGSKHAVLGL-NKNVAAELGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVARNA  231 (280)
Q Consensus       154 sS~~~~~~~~~~~~Y~~sK~al~~~-~~~la~e~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (280)
                      ||.++..+  +...|++||+|+++| .+.++.++++. |+||+|+||+++ |++........           .... ..
T Consensus       628 SSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~~~-----------~~l~-~i  692 (1688)
T 2pff_A          628 SPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIA-----------EGIE-KM  692 (1688)
T ss_dssp             CSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTTCS-----------TTTS-SS
T ss_pred             EChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchHHH-----------HHHH-hC
Confidence            99999877  678999999999999 88889988887 999999999999 78754310000           0000 11


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCC-CCceeecEEEeC--CCccccc
Q 023553          232 NMQGTELTANDVANAVLFLASDE-ARYISGTNLMVD--GGFTSVN  273 (280)
Q Consensus       232 ~~~~~~~~~~dva~~i~~l~s~~-~~~~~G~~i~~d--gG~~~~~  273 (280)
                      +  .+..+|+|+|+++++|+++. ..+++|+.+.+|  ||+....
T Consensus       693 p--lR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~  735 (1688)
T 2pff_A          693 G--VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  735 (1688)
T ss_dssp             S--CCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSS
T ss_pred             C--CCCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecC
Confidence            1  15669999999999999987 678999999876  9976543

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=2.8e-34  Score=289.85  Aligned_cols=241  Identities=20%  Similarity=0.252  Sum_probs=196.9

Q ss_pred             ccccCCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEe-cCcchHHHHH----HHhCC-CCCeEEEecCCCCHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATG-IGESTVRLFHKHGAKVCIAD-VQDNLGQQVC----QSLGG-EPDTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus        13 ~~~l~~k~vlItGas~g-iG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~----~~~~~-~~~~~~~~~D~~~~~~~~~~~   85 (280)
                      .++++||++|||||++| ||+++|++|+++|++|++++ |+.+.+++..    +.+.. ..++.++.||+++.+++.+++
T Consensus       647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHH
Confidence            34689999999999999 99999999999999999995 5555544333    33332 346888999999999999999


Q ss_pred             HHHHHH---hC-CccEEEECCCCCCCCCC-CCCCCC--HHHHHHHhhhhhhhHHHHHHH--HHHhcccCCCceEEEEccc
Q 023553           86 DLTVEK---FG-TLDIMVNNAGISGAPCP-DIREAD--LSEFEKVFDINVKGVFHGMKH--AARIMIPQTKGTIISICSV  156 (280)
Q Consensus        86 ~~~~~~---~g-~id~li~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~l~~~~~g~iv~isS~  156 (280)
                      +++.+.   +| +||+||||||+...  . ++.+.+  .++|++++++|+.+++.+++.  +++.|.+++.|+||++||.
T Consensus       727 ~~i~~~~~~~G~~IDiLVnNAGi~~~--~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~  804 (1878)
T 2uv9_A          727 NYIYDTKNGLGWDLDYVVPFAAIPEN--GREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPN  804 (1878)
T ss_dssp             HHHHCSSSSCCCCCSEEEECCCCCCT--TCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSC
T ss_pred             HHHHHhhcccCCCCcEEEeCcccccC--CCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcch
Confidence            999988   88 99999999998754  5 788898  899999999999999999987  7888877777999999999


Q ss_pred             cccccCCCCccchhhHHHHHHHHHHHHH-HHCCCCeEEEEEeCCcee-ccccccCCCcchhhhhhhhhhHHHHhhhccCC
Q 023553          157 AGAIGGLGPHAYTGSKHAVLGLNKNVAA-ELGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVARNANMQ  234 (280)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~al~~~~~~la~-e~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (280)
                      ++..+  +...|++||+|+++|++.++. +++++ |+||+|+||+++ |+|....    ..       ......+ .++ 
T Consensus       805 ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~----~~-------~~~~~~~-~pl-  868 (1878)
T 2uv9_A          805 HGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN----NL-------VAEGVEK-LGV-  868 (1878)
T ss_dssp             SSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH----HH-------THHHHHT-TTC-
T ss_pred             hhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc----hh-------hHHHHHh-cCC-
Confidence            99877  478999999999999886655 47776 999999999999 9985431    00       1111111 111 


Q ss_pred             CCCCCHHHHHHHHHHhcCCCC-CceeecEEEe--CCCcccc
Q 023553          235 GTELTANDVANAVLFLASDEA-RYISGTNLMV--DGGFTSV  272 (280)
Q Consensus       235 ~~~~~~~dva~~i~~l~s~~~-~~~~G~~i~~--dgG~~~~  272 (280)
                       +..+|+|+|+++++|+++.. .++||+.+.+  |||+...
T Consensus       869 -r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          869 -RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             -CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             -CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence             55699999999999998776 7999999987  5997654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=6.7e-34  Score=233.19  Aligned_cols=200  Identities=23%  Similarity=0.250  Sum_probs=171.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      |+++||||++|||++++++|+++  +|++++|+.+..++..+.+..    .++.+|++|++++.+++++    ++++|++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~----~~~~~D~~~~~~~~~~~~~----~~~id~v   70 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA----RALPADLADELEAKALLEE----AGPLDLL   70 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC----EECCCCTTSHHHHHHHHHH----HCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC----cEEEeeCCCHHHHHHHHHh----cCCCCEE
Confidence            68999999999999999999999  999999998887777666542    6788999999999988876    6899999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      |||||....  .++.+.+.++|++.+++|+.+++++++++    ++++.++||++||..+..+.++...|+++|++++.+
T Consensus        71 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  144 (207)
T 2yut_A           71 VHAVGKAGR--ASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAY  144 (207)
T ss_dssp             EECCCCCCC--BCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHH
T ss_pred             EECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHH
Confidence            999998754  67888899999999999999999999988    234568999999999999988999999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      ++.++.+++++||++++++||++.|++....                     ..+.+++++|+|+|++++++++...
T Consensus       145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~---------------------~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          145 LEAARKELLREGVHLVLVRLPAVATGLWAPL---------------------GGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHTTTCEEEEECCCCBCSGGGGGG---------------------TSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHhhhCCEEEEEecCcccCCCcccc---------------------CCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999973211                     0112678999999999999997644

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=2e-34  Score=243.41  Aligned_cols=223  Identities=28%  Similarity=0.321  Sum_probs=181.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      |++|||||++|||+++++.|+++|++|++++|+.+..+.            .+.+|+++.++++++++++   .+++|+|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------~~~~D~~~~~~~~~~~~~~---~~~~d~v   66 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA------------DLSTPGGRETAVAAVLDRC---GGVLDGL   66 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------CTTSHHHHHHHHHHHHHHH---TTCCSEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------------cccCCcccHHHHHHHHHHc---CCCccEE
Confidence            689999999999999999999999999999998764321            1568999999988877743   3799999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC----------------
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG----------------  162 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~----------------  162 (280)
                      |||||....         .+++++.+++|+.+++++++++++.|++.+.++||++||..+..+.                
T Consensus        67 i~~Ag~~~~---------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  137 (255)
T 2dkn_A           67 VCCAGVGVT---------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA  137 (255)
T ss_dssp             EECCCCCTT---------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred             EECCCCCCc---------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence            999997542         1248899999999999999999999987777999999999887654                


Q ss_pred             ----------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc
Q 023553          163 ----------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN  232 (280)
Q Consensus       163 ----------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (280)
                                ++...|++||++++.+++.++.+++++||++++++||++.|++.........        ...+.....+
T Consensus       138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~--------~~~~~~~~~~  209 (255)
T 2dkn_A          138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPR--------YGESTRRFVA  209 (255)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTT--------THHHHHSCCC
T ss_pred             hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchh--------hHHHHHHHHH
Confidence                      4567899999999999999999998889999999999999998654311100        0111111100


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccccc
Q 023553          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       233 ~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      +.+++++++|+|++++++++....+++|+++.+|||.....
T Consensus       210 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  250 (255)
T 2dkn_A          210 PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALM  250 (255)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHH
T ss_pred             HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeee
Confidence            34789999999999999998777789999999999976543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=9.7e-33  Score=255.66  Aligned_cols=221  Identities=14%  Similarity=0.120  Sum_probs=180.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEE-ecCc-------------chHHHHHHHhCC-CCCeEEEecCCCCHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAK-VCIA-DVQD-------------NLGQQVCQSLGG-EPDTFFCHCDVTKEE   79 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~-~r~~-------------~~~~~~~~~~~~-~~~~~~~~~D~~~~~   79 (280)
                      -++|++|||||++|||+++|++|+++|+. |+++ +|+.             +..++..+++.. ..++.++.||++|++
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            47899999999999999999999999998 7777 8883             444555555432 357889999999999


Q ss_pred             HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccc
Q 023553           80 DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAG  158 (280)
Q Consensus        80 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~  158 (280)
                      ++.++++++. .+++||+||||||+...  ..+.+.+.++|++++++|+.+++++.+.+.+.+++++ .++||++||.++
T Consensus       329 ~v~~~~~~i~-~~g~id~vVh~AGv~~~--~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~  405 (525)
T 3qp9_A          329 AAARLLAGVS-DAHPLSAVLHLPPTVDS--EPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAA  405 (525)
T ss_dssp             HHHHHHHTSC-TTSCEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGG
T ss_pred             HHHHHHHHHH-hcCCCcEEEECCcCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHH
Confidence            9999999998 78999999999999876  8899999999999999999999999999999997766 689999999999


Q ss_pred             cccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCC
Q 023553          159 AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL  238 (280)
Q Consensus       159 ~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (280)
                      ..+.+++..|+++|+++++|+    .+++.+||++++|+||+++|+|......            ...+.+. .  -..+
T Consensus       406 ~~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~~------------~~~~~~~-g--~~~l  466 (525)
T 3qp9_A          406 IWGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGAT------------GERLRRL-G--LRPL  466 (525)
T ss_dssp             TTCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSHH------------HHHHHHT-T--BCCB
T ss_pred             cCCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchhh------------HHHHHhc-C--CCCC
Confidence            999999999999999999885    5677889999999999999998742110            0111111 1  2457


Q ss_pred             CHHHHHHHHHHhcCCCCCce
Q 023553          239 TANDVANAVLFLASDEARYI  258 (280)
Q Consensus       239 ~~~dva~~i~~l~s~~~~~~  258 (280)
                      +|+++++++.++++.....+
T Consensus       467 ~pee~a~~l~~~l~~~~~~v  486 (525)
T 3qp9_A          467 APATALTALDTALGHGDTAV  486 (525)
T ss_dssp             CHHHHHHHHHHHHHHTCSEE
T ss_pred             CHHHHHHHHHHHHhCCCCeE
Confidence            99999999999997655433

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=8.2e-31  Score=276.19  Aligned_cols=243  Identities=19%  Similarity=0.184  Sum_probs=182.0

Q ss_pred             ccCCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEecCcch-----HHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATG-IGESTVRLFHKHGAKVCIADVQDNL-----GQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        15 ~l~~k~vlItGas~g-iG~~ia~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .++||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++... ..+..+.||+++++++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            489999999999999 9999999999999999999998776     56666666543 4678899999999999999999


Q ss_pred             HHH----HhCCccEEEECCCCCC---CCCCCCCCCCHHH----HHHHhhhhhhhHHHHHHHHHHhcccCCCc----eEEE
Q 023553           88 TVE----KFGTLDIMVNNAGISG---APCPDIREADLSE----FEKVFDINVKGVFHGMKHAARIMIPQTKG----TIIS  152 (280)
Q Consensus        88 ~~~----~~g~id~li~~ag~~~---~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~g----~iv~  152 (280)
                      +.+    .+|++|+||||||+..   +......+.+.++    ++..+++|+.+.+.+++.+.+.|..++.+    .++.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence            998    8899999999999821   1001222333343    45559999999999999999999766532    2333


Q ss_pred             EccccccccCCCCccchhhHHHHHHHHHHHHHH--HCCCCeEEEEEeCCcee-ccccccCCCcchhhhhhhhhhHHHHhh
Q 023553          153 ICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE--LGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVAR  229 (280)
Q Consensus       153 isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e--~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (280)
                      .++..+.  .++...|++||+|+++|+++|+.|  +++ +|+||+++||+++ |++.......           .....+
T Consensus      2293 ~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~~-----------~~~~~~ 2358 (3089)
T 3zen_D         2293 GSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDAI-----------VSAVEE 2358 (3089)
T ss_dssp             ECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTTT-----------HHHHGG
T ss_pred             CCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchhH-----------HHHHHh
Confidence            3443332  235568999999999999999999  664 6999999999999 6664321110           011111


Q ss_pred             hccCCCCCCCHHHHHHHHHHhcCCCCCce-eecEEEeC--CCcccccC
Q 023553          230 NANMQGTELTANDVANAVLFLASDEARYI-SGTNLMVD--GGFTSVNH  274 (280)
Q Consensus       230 ~~~~~~~~~~~~dva~~i~~l~s~~~~~~-~G~~i~~d--gG~~~~~~  274 (280)
                        .. .+..+|+|+|++++||+|+..+++ +|+.+.+|  ||+....+
T Consensus      2359 --~~-~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~ 2403 (3089)
T 3zen_D         2359 --AG-VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKI 2403 (3089)
T ss_dssp             --GS-CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCC
T ss_pred             --cC-CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCC
Confidence              11 234499999999999999876655 56666665  99965333

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=1.5e-29  Score=232.01  Aligned_cols=217  Identities=15%  Similarity=0.213  Sum_probs=172.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc---chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD---NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~---~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+|++|||||++|||+++|++|+++|+ .|++++|+.   +..+++.+++.. ..++.++.||++|++++.++++++.+.
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            359999999999999999999999999 788899874   334455555433 357889999999999999999988766


Q ss_pred             hCCccEEEECCCCC-CCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           92 FGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                       +++|+||||||+. ..  ..+.+.+.++|++++++|+.+.+++.+.+.+.    ..++||++||.++..+.+++..|++
T Consensus       318 -g~ld~vVh~AGv~~~~--~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g~~g~~~YaA  390 (496)
T 3mje_A          318 -APLTAVFHSAGVAHDD--APVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVWGSGGQPGYAA  390 (496)
T ss_dssp             -SCEEEEEECCCCCCSC--CCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTTCTTCHHHHH
T ss_pred             -CCCeEEEECCcccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcCCCCCcHHHHH
Confidence             7999999999997 44  78999999999999999999999999887664    3579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|+++++|++.+    +.+||++++|+||++.+..........          ..+ .+. .  -...+|++.++++.++
T Consensus       391 aKa~ldala~~~----~~~Gi~v~sV~pG~w~~~gm~~~~~~~----------~~l-~~~-g--~~~l~pe~~~~~l~~~  452 (496)
T 3mje_A          391 ANAYLDALAEHR----RSLGLTASSVAWGTWGEVGMATDPEVH----------DRL-VRQ-G--VLAMEPEHALGALDQM  452 (496)
T ss_dssp             HHHHHHHHHHHH----HHTTCCCEEEEECEESSSCC------C----------HHH-HHT-T--EEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH----HhcCCeEEEEECCcccCCccccChHHH----------HHH-Hhc-C--CCCCCHHHHHHHHHHH
Confidence            999999988754    456999999999999776543221110          001 110 0  1235899999999999


Q ss_pred             cCCCCCce
Q 023553          251 ASDEARYI  258 (280)
Q Consensus       251 ~s~~~~~~  258 (280)
                      +......+
T Consensus       453 l~~~~~~~  460 (496)
T 3mje_A          453 LENDDTAA  460 (496)
T ss_dssp             HHHTCSEE
T ss_pred             HcCCCceE
Confidence            87654433

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=1.1e-29  Score=245.41  Aligned_cols=223  Identities=14%  Similarity=0.225  Sum_probs=177.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHH-HcCCe-EEEEecC---cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFH-KHGAK-VCIADVQ---DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~-~~g~~-Vi~~~r~---~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ++|+++||||++|||+++|++|+ ++|++ |++++|+   .+..++..+++.. ..++.++.||++|++++.++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            68999999999999999999999 79995 9999998   4445555565543 35788999999999999999999877


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .+ +||++|||||+...  ..+.+++.++|++.+++|+.|++++.+++.|.|      +||++||.++..+.+++..|++
T Consensus       609 ~~-~id~lVnnAGv~~~--~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaA  679 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLDD--GVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAA  679 (795)
T ss_dssp             TS-CEEEEEECCCCCCC--CCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHH
T ss_pred             hC-CCEEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHH
Confidence            76 99999999999876  889999999999999999999999999997776      8999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|+    |+++|+++++++||++++|+||++.|++........         ....+.+ ..  ....++++....+..+
T Consensus       680 aka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~---------~~~~~~~-~g--~~~l~~~e~~~~~~~~  743 (795)
T 3slk_A          680 ANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREA---------EQDRLAR-SG--LLPISTEEGLSQFDAA  743 (795)
T ss_dssp             HHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHH---------HHHHHHH-TT--BCCCCHHHHHHHHHHH
T ss_pred             HHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHH---------HHHHHHh-cC--CCCCCHHHHHHHHHHH
Confidence            996    566666777778999999999999988643321110         1111111 11  1346788888888777


Q ss_pred             cCCCCCceeecEEE
Q 023553          251 ASDEARYISGTNLM  264 (280)
Q Consensus       251 ~s~~~~~~~G~~i~  264 (280)
                      +..+...+....+.
T Consensus       744 l~~~~~~~~~~~~d  757 (795)
T 3slk_A          744 CGGAHTVVAPVRFS  757 (795)
T ss_dssp             HTSSCSSCCCCCBC
T ss_pred             HhCCCcEEEEEecC
Confidence            76555444443333

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=3.9e-29  Score=209.11  Aligned_cols=210  Identities=15%  Similarity=0.166  Sum_probs=161.1

Q ss_pred             CcccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCe-EEEecCCCCHHHHHHHHHH
Q 023553            9 SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT-FFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus         9 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~   87 (280)
                      +++...++++|+++||||+|+||+++++.|+++|++|++++|+.+..+++.+     ..+ .++.+|++         +.
T Consensus        12 ~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-----~~~~~~~~~Dl~---------~~   77 (236)
T 3e8x_A           12 SGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-----RGASDIVVANLE---------ED   77 (236)
T ss_dssp             ---------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-----TTCSEEEECCTT---------SC
T ss_pred             ccccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-----CCCceEEEcccH---------HH
Confidence            3445577999999999999999999999999999999999999888766543     256 78999999         23


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC---CC
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG---LG  164 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~---~~  164 (280)
                      +.+.++++|+|||+||....          +++++.+++|+.++.++++++..    .+.++||++||..+..+.   +.
T Consensus        78 ~~~~~~~~D~vi~~ag~~~~----------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~  143 (236)
T 3e8x_A           78 FSHAFASIDAVVFAAGSGPH----------TGADKTILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVDPDQGPMN  143 (236)
T ss_dssp             CGGGGTTCSEEEECCCCCTT----------SCHHHHHHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSCGGGSCGG
T ss_pred             HHHHHcCCCEEEECCCCCCC----------CCccccchhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCCCCCChhh
Confidence            34455799999999997532          45889999999999999999855    345799999998776664   46


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ...|+.+|++++.+.+       ..|++++.+.||++.++..........               .......+++++|+|
T Consensus       144 ~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~---------------~~~~~~~~i~~~Dva  201 (236)
T 3e8x_A          144 MRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSP---------------HFSEITRSITRHDVA  201 (236)
T ss_dssp             GHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEES---------------SCSCCCCCEEHHHHH
T ss_pred             hhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEecc---------------CCCcccCcEeHHHHH
Confidence            7899999999999876       468999999999999986433221110               001126788999999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          245 NAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++++++++..  ...|+.+.+++|..
T Consensus       202 ~~~~~~~~~~--~~~g~~~~v~~~~~  225 (236)
T 3e8x_A          202 KVIAELVDQQ--HTIGKTFEVLNGDT  225 (236)
T ss_dssp             HHHHHHTTCG--GGTTEEEEEEECSE
T ss_pred             HHHHHHhcCc--cccCCeEEEeCCCc
Confidence            9999999754  37899999988853

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.95  E-value=7.3e-28  Score=221.25  Aligned_cols=214  Identities=17%  Similarity=0.176  Sum_probs=169.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcc---hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDN---LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~---~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..++++|||||++|||++++++|+++|+. |++++|+.+   ..+++.+++.. ..++.++.||++|++++.++++.+ +
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence            36899999999999999999999999995 999999864   34444444432 357888999999999999999988 5


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|+||||||+...  ..+.+.+.+++++++++|+.+.+++.+.+.+    .+.++||++||.++..+.++...|++
T Consensus       303 ~~g~ld~VIh~AG~~~~--~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Yaa  376 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYAP  376 (486)
T ss_dssp             TTSCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTHH
T ss_pred             hcCCCcEEEECCccCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHHHH
Confidence            56899999999999865  7788999999999999999999999988754    35689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceecc-ccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATG-LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +|++++.|++.++    ..|+++++|+||++.++ |...... .            ...+ ..  -..++++++++++..
T Consensus       377 aka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~~~-~------------~~~~-~g--~~~i~~e~~a~~l~~  436 (486)
T 2fr1_A          377 GNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPVA-D------------RFRR-HG--VIEMPPETACRALQN  436 (486)
T ss_dssp             HHHHHHHHHHHHH----HTTCCCEEEEECCBC-------------------------CTT-TT--EECBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchhHH-H------------HHHh-cC--CCCCCHHHHHHHHHH
Confidence            9999999876543    46899999999999886 3221100 0            0000 00  135799999999999


Q ss_pred             hcCCCCC
Q 023553          250 LASDEAR  256 (280)
Q Consensus       250 l~s~~~~  256 (280)
                      ++.....
T Consensus       437 ~l~~~~~  443 (486)
T 2fr1_A          437 ALDRAEV  443 (486)
T ss_dssp             HHHTTCS
T ss_pred             HHhCCCC
Confidence            9875443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.95  E-value=6.2e-27  Score=216.00  Aligned_cols=210  Identities=21%  Similarity=0.265  Sum_probs=169.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcc---hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDN---LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~---~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..+|++|||||++|||++++++|+++|+ +|++++|+..   ..++..+++.. ..++.++.||++|++++.++++.   
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH---
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc---
Confidence            3689999999999999999999999999 5999999864   34555555543 35788999999999999888875   


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                        +++|+||||||+...  ..+.+.+.+++++++++|+.+.+++.+.+.+.   .+.++||++||.++..+.++...|++
T Consensus       334 --~~ld~VVh~AGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~Yaa  406 (511)
T 2z5l_A          334 --YPPNAVFHTAGILDD--AVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAA  406 (511)
T ss_dssp             --SCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHH
T ss_pred             --CCCcEEEECCcccCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHH
Confidence              689999999999865  77889999999999999999999988876432   14589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCce-eccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAV-ATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +|++++.|++.+    +..|+++++|+||++ +|.|.....   .      ..+    .+. .  -..++++++++++..
T Consensus       407 aKa~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~---~------~~~----~~~-g--~~~l~~e~~a~~l~~  466 (511)
T 2z5l_A          407 ANAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAG---E------ESL----SRR-G--LRAMDPDAAVDALLG  466 (511)
T ss_dssp             HHHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHH---H------HHH----HHH-T--BCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH----HHcCCcEEEEECCcccCCccccccc---H------HHH----Hhc-C--CCCCCHHHHHHHHHH
Confidence            999999998864    356999999999999 777653310   0      000    011 1  245799999999999


Q ss_pred             hcCCCC
Q 023553          250 LASDEA  255 (280)
Q Consensus       250 l~s~~~  255 (280)
                      ++....
T Consensus       467 al~~~~  472 (511)
T 2z5l_A          467 AMGRND  472 (511)
T ss_dssp             HHHHTC
T ss_pred             HHhCCC
Confidence            986544

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=5.4e-27  Score=199.81  Aligned_cols=195  Identities=16%  Similarity=0.139  Sum_probs=156.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++|++|||||+|+||+++++.|+++|++|++++|+.....        ...+.++.+|++|.+++.++++       ++|
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~-------~~D   66 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------GPNEECVQCDLADANAVNAMVA-------GCD   66 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------CTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------CCCCEEEEcCCCCHHHHHHHHc-------CCC
Confidence            4689999999999999999999999999999999876532        3468899999999999887776       899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc------------ccCCC
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA------------IGGLG  164 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~------------~~~~~  164 (280)
                      +||||||+...          ++|++.+++|+.+++++++++.+    .+.++||++||..+.            .+.++
T Consensus        67 ~vi~~Ag~~~~----------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~  132 (267)
T 3rft_A           67 GIVHLGGISVE----------KPFEQILQGNIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYPQTERLGPDVPARP  132 (267)
T ss_dssp             EEEECCSCCSC----------CCHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCC
T ss_pred             EEEECCCCcCc----------CCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCCCCCCCCCCCCCCC
Confidence            99999998422          35789999999999999999955    456899999998887            33345


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ...|+.||++.+.+++.++.++   |++++.|.||.+.++.....     ..                  ..+++++|++
T Consensus       133 ~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~-----~~------------------~~~~~~~d~a  186 (267)
T 3rft_A          133 DGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYR-----ML------------------STWFSHDDFV  186 (267)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTT-----HH------------------HHBCCHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCC-----ce------------------eeEEcHHHHH
Confidence            6899999999999999999885   78999999999988743211     00                  2367899999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCC
Q 023553          245 NAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      +++..++....  ..+.++.+.++
T Consensus       187 ~~~~~~~~~~~--~~~~~~~~~s~  208 (267)
T 3rft_A          187 SLIEAVFRAPV--LGCPVVWGASA  208 (267)
T ss_dssp             HHHHHHHHCSC--CCSCEEEECCC
T ss_pred             HHHHHHHhCCC--CCceEEEEeCC
Confidence            99999886432  23344444433

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=1.4e-25  Score=185.59  Aligned_cols=202  Identities=9%  Similarity=0.021  Sum_probs=153.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHH-HcCCeEEEEecCcc-hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           18 GRVALITGGATGIGESTVRLFH-KHGAKVCIADVQDN-LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~-~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .|+++||||+|+||+++++.|+ +.|++|++++|+.+ .++++..   ....+.++.+|++|++++.++++       ++
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII---DHERVTVIEGSFQNPGXLEQAVT-------NA   74 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH---TSTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc---CCCceEEEECCCCCHHHHHHHHc-------CC
Confidence            3789999999999999999999 89999999999987 6554431   23468889999999999877765       88


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc---------
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH---------  166 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~---------  166 (280)
                      |++|||||..                     |+.     .+.+++.|++.+.++||++||..+..+.+...         
T Consensus        75 d~vv~~ag~~---------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~  128 (221)
T 3r6d_A           75 EVVFVGAMES---------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLP  128 (221)
T ss_dssp             SEEEESCCCC---------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSC
T ss_pred             CEEEEcCCCC---------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccc
Confidence            9999999842                     222     77788888777778999999998877655443         


Q ss_pred             -cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHH
Q 023553          167 -AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       167 -~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                       .|+.+|++++.+.+.       .|++++.|+||++.++..........              ......+.+++++|+|+
T Consensus       129 ~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~--------------~~~~~~~~~~~~~dvA~  187 (221)
T 3r6d_A          129 ISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIP--------------EGAQFNDAQVSREAVVK  187 (221)
T ss_dssp             HHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEEC--------------TTSCCCCCEEEHHHHHH
T ss_pred             cHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeecc--------------CCccCCCceeeHHHHHH
Confidence             899999999987753       58999999999998873222111100              01122245789999999


Q ss_pred             HHHHhc--CCCCCceeecEEEeCCCcccccCcc
Q 023553          246 AVLFLA--SDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       246 ~i~~l~--s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      ++++++  ++...++++...-.+.+.....++|
T Consensus       188 ~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~  220 (221)
T 3r6d_A          188 AIFDILHAADETPFHRTSIGVGEPGTHYDXPSF  220 (221)
T ss_dssp             HHHHHHTCSCCGGGTTEEEEEECTTCCCSSCCC
T ss_pred             HHHHHHHhcChhhhhcceeeecCCCCCCCCCCC
Confidence            999999  8776677666655555555445554

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.94  E-value=1.7e-25  Score=197.31  Aligned_cols=224  Identities=17%  Similarity=0.137  Sum_probs=172.2

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHc-CC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKH-GA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~-g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +....+++|++|||||+|+||++++++|++. |+ .|++++|+..+.....+.+.. ..+.++.+|++|.+++.++++  
T Consensus        14 ~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~~~~~--   90 (344)
T 2gn4_A           14 NHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND-PRMRFFIGDVRDLERLNYALE--   90 (344)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC-TTEEEEECCTTCHHHHHHHTT--
T ss_pred             cHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC-CCEEEEECCCCCHHHHHHHHh--
Confidence            3344578999999999999999999999999 98 999999998877766665542 468889999999988776654  


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                           ++|+|||+||....   +   ....+..+.+++|+.++.++++++.+.    +.++||++||..+..+   ...|
T Consensus        91 -----~~D~Vih~Aa~~~~---~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~p---~~~Y  152 (344)
T 2gn4_A           91 -----GVDICIHAAALKHV---P---IAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAANP---INLY  152 (344)
T ss_dssp             -----TCSEEEECCCCCCH---H---HHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSSC---CSHH
T ss_pred             -----cCCEEEECCCCCCC---C---chhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCCC---ccHH
Confidence                 89999999997532   0   122345789999999999999999874    3579999999876543   5799


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc--------cCCCCCCCH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA--------NMQGTELTA  240 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~  240 (280)
                      +.||++.+.+++.++.++.+.|++++++.||.+.++.... .          ..+........        .....++++
T Consensus       153 ~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~-i----------~~~~~~~~~g~~~~~i~~~~~~r~~i~v  221 (344)
T 2gn4_A          153 GATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSV-V----------PFFKKLVQNKASEIPITDIRMTRFWITL  221 (344)
T ss_dssp             HHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSH-H----------HHHHHHHHHTCCCEEESCTTCEEEEECH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCH-H----------HHHHHHHHcCCCceEEeCCCeEEeeEEH
Confidence            9999999999999998888889999999999999875210 0          00111111110        112357899


Q ss_pred             HHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          241 NDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       241 ~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      +|+|+++++++...   ..|+++.++++.
T Consensus       222 ~D~a~~v~~~l~~~---~~g~~~~~~~~~  247 (344)
T 2gn4_A          222 DEGVSFVLKSLKRM---HGGEIFVPKIPS  247 (344)
T ss_dssp             HHHHHHHHHHHHHC---CSSCEEEECCCE
T ss_pred             HHHHHHHHHHHhhc---cCCCEEecCCCc
Confidence            99999999998643   267888887763

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.93  E-value=4.4e-25  Score=194.18  Aligned_cols=229  Identities=17%  Similarity=0.107  Sum_probs=168.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      |++|||||+|+||+++++.|++.|++|++++|+. .......+.+....++.++.+|+++.+++.++++..     ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-----CCCE
Confidence            5899999999999999999999999999999853 222222233322346788899999999988887742     7999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-----------------
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------------  160 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-----------------  160 (280)
                      |||+||....      +.+.+++++.+++|+.++.++++++.+.+.   .++||++||.+...                 
T Consensus        77 vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~  147 (347)
T 1orr_A           77 CFHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCV  147 (347)
T ss_dssp             EEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             EEECCcccCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccccccccc
Confidence            9999996421      233457889999999999999999998763   26999999976532                 


Q ss_pred             ----------cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh
Q 023553          161 ----------GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       161 ----------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                                +..+...|+.+|++.+.+++.++.++   |++++.+.||.+.++........... ..   .........
T Consensus       148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~-~~---~~~~~~~~~  220 (347)
T 1orr_A          148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWV-GW---FCQKAVEIK  220 (347)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHH-HH---HHHHHHHHH
T ss_pred             ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHH-HH---HHHHHHhCc
Confidence                      12245689999999999999999885   79999999999999975432111000 00   011111111


Q ss_pred             c----cC--------CCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          231 A----NM--------QGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       231 ~----~~--------~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      .    ++        ...+++++|+|+++++++.. ....+|++++++||.
T Consensus       221 ~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          221 NGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             TTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             ccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence            0    11        12478999999999999863 235689999999985

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.93  E-value=1e-25  Score=196.36  Aligned_cols=222  Identities=16%  Similarity=0.083  Sum_probs=165.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .+.+++|||||+|+||+++++.|+++|++|++++|+... +.    +    .+.++.+|+++.+++.++++.     +++
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l----~~~~~~~Dl~d~~~~~~~~~~-----~~~   75 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P----NVEMISLDIMDSQRVKKVISD-----IKP   75 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T----TEEEEECCTTCHHHHHHHHHH-----HCC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c----eeeEEECCCCCHHHHHHHHHh-----cCC
Confidence            567899999999999999999999999999999998764 11    1    577889999999998887774     379


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-------------
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-------------  162 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-------------  162 (280)
                      |+|||+||....      ..+.+++++.+++|+.++.++++++ +.+  .+.++||++||.+...+.             
T Consensus        76 d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~  146 (321)
T 2pk3_A           76 DYIFHLAAKSSV------KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQL  146 (321)
T ss_dssp             SEEEECCSCCCH------HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCC
T ss_pred             CEEEEcCcccch------hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCC
Confidence            999999997532      1223467899999999999999999 554  245899999998765332             


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh---------hccC
Q 023553          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR---------NANM  233 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  233 (280)
                      ++...|+.+|++.+.+++.++.++   |++++.+.|+.+.++............    .........         ....
T Consensus       147 ~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~  219 (321)
T 2pk3_A          147 RPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFA----KQIVDIEMEKQEPIIKVGNLEA  219 (321)
T ss_dssp             BCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHH----HHHHHHHTTSSCSEEEESCSSC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHH----HHHHHHhcCCCCCeEEeCCCCc
Confidence            356789999999999999999874   799999999999998754311000000    000000001         0011


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       234 ~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++++|+|++++++++..   .+|++++++||..
T Consensus       220 ~~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~  253 (321)
T 2pk3_A          220 VRDFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIG  253 (321)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCE
T ss_pred             EEeeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCC
Confidence            245789999999999999654   4689999998854

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=3.7e-25  Score=194.42  Aligned_cols=237  Identities=15%  Similarity=0.123  Sum_probs=168.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .++++|||||+|+||+++++.|+++|++|++++|+.+...+..+.+..  ...+.++.+|+++++++.++++.     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            578999999999999999999999999999999987654444333311  24678899999999999888775     48


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CC
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GL  163 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-----------~~  163 (280)
                      +|++||+||....      ....++..+.+++|+.+..++++++..    .+.++||++||.+....           ..
T Consensus        79 ~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~  148 (341)
T 3enk_A           79 ITAAIHFAALKAV------GESVAKPIEYYRNNLDSLLSLLRVMRE----RAVKRIVFSSSATVYGVPERSPIDETFPLS  148 (341)
T ss_dssp             CCEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGBCSCSSSSBCTTSCCB
T ss_pred             CcEEEECcccccc------CccccChHHHHHHHHHHHHHHHHHHHh----CCCCEEEEEecceEecCCCCCCCCCCCCCC
Confidence            9999999997532      122344567899999999988776544    45579999999766522           22


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh--hhhhhhhhHHHHhhh-c---------
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVARN-A---------  231 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~---------  231 (280)
                      +...|+.||++.+.+++.++.++.  ++++..+.|+.+.++...........  .......+....... .         
T Consensus       149 ~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  226 (341)
T 3enk_A          149 ATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDY  226 (341)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             CCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCcc
Confidence            346899999999999999998864  59999999999998854322111100  000001111111111 0         


Q ss_pred             -----cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          232 -----NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 -----~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                           .....++.++|+|++++.++........|+++++++|..
T Consensus       227 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~  270 (341)
T 3enk_A          227 PTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRG  270 (341)
T ss_dssp             SSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCC
T ss_pred             CCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCc
Confidence                 111357889999999999986422235689999998864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.93  E-value=2.4e-25  Score=195.31  Aligned_cols=232  Identities=13%  Similarity=0.037  Sum_probs=167.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC--CCCCeEEE-ecCCCCHHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFC-HCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~-~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+.+.  ...++.++ .+|+++.+++.++++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence            4679999999999999999999999999999999998776555443321  11457777 799999987765554     


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-cC--------
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GG--------  162 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-~~--------  162 (280)
                        ++|+|||+||....  .       +++.+.+++|+.++.++++++.+.   .+.++||++||.++.. +.        
T Consensus        83 --~~d~vih~A~~~~~--~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~~~~~  148 (342)
T 1y1p_A           83 --GAAGVAHIASVVSF--S-------NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             --TCSEEEECCCCCSC--C-------SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             --CCCEEEEeCCCCCC--C-------CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHhcCCCCCCCCccc
Confidence              89999999997532  1       246789999999999999998762   3457999999987652 11        


Q ss_pred             ----------------------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc---chhhh
Q 023553          163 ----------------------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE---EERTE  217 (280)
Q Consensus       163 ----------------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---~~~~~  217 (280)
                                            .+...|+.||++.+.+++.++.++.. +++++.+.||.+.++........   .....
T Consensus       149 ~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~  227 (342)
T 1y1p_A          149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMM  227 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHH
T ss_pred             CccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHHH
Confidence                                  12357999999999999999999876 89999999999999976543211   00000


Q ss_pred             hhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          218 DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ....+......... ....+++++|+|++++.++..  ...+|+.+..+|+.
T Consensus       228 ~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~--~~~~g~~~~~~g~~  276 (342)
T 1y1p_A          228 SLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAGT  276 (342)
T ss_dssp             HHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCEE
T ss_pred             HHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcC--cccCCceEEEeCCC
Confidence            00000000000111 235789999999999999864  34567766666654

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.93  E-value=2.1e-25  Score=197.41  Aligned_cols=226  Identities=15%  Similarity=0.110  Sum_probs=166.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCc--chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           20 VALITGGATGIGESTVRLFHKH-GAKVCIADVQD--NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++|||||+|+||+++++.|++. |++|++++|+.  ...+.+ +.+.....+.++.+|+++.+++.+++++.     ++|
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhcCCCeEEEECCCCCHHHHHHHHhhc-----CCC
Confidence            5999999999999999999998 79999999864  222221 22222346888999999999988887652     899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-----CceEEEEccccccc-----------
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-----KGTIISICSVAGAI-----------  160 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~g~iv~isS~~~~~-----------  160 (280)
                      +|||+||....      +.+.+++++.+++|+.++.++++++.+.|..-+     .++||++||.+...           
T Consensus        76 ~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           76 AVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             EEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             EEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            99999997531      234466889999999999999999999864321     35999999975321           


Q ss_pred             ----------cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh
Q 023553          161 ----------GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       161 ----------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                                +..+...|+.+|++.+.+++.++.++   |++++.+.||.+.++...........       ........
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~-------~~~~~~~~  219 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLV-------ILNALEGK  219 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHH-------HHHHHHTC
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHH-------HHHHHcCC
Confidence                      12345789999999999999999886   79999999999999975321000000       11111111


Q ss_pred             c-------cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          231 A-------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       231 ~-------~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .       .....+++++|+|++++++++..   .+|++++++||..
T Consensus       220 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~  263 (361)
T 1kew_A          220 PLPIYGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNE  263 (361)
T ss_dssp             CEEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCE
T ss_pred             CceEcCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCe
Confidence            0       11246789999999999999643   4799999999864

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.93  E-value=3.5e-25  Score=194.19  Aligned_cols=223  Identities=16%  Similarity=0.079  Sum_probs=164.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcc--hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           18 GRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDN--LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|||||+|+||+++++.|+++|  ++|++++|+..  ..+.+ +.+.....+.++.+|+++.+++.+++.       
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLEDDPRYTFVKGDVADYELVKELVR-------   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHH-------
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhccCCceEEEEcCCCCHHHHHHHhh-------
Confidence            4679999999999999999999997  89999998642  12111 222223468889999999998877762       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-----------cC
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------GG  162 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-----------~~  162 (280)
                      ++|+|||+||....      +.+.+++++.+++|+.++.++++++.+.   ...++||++||.+...           +.
T Consensus        75 ~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~~  145 (336)
T 2hun_A           75 KVDGVVHLAAESHV------DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDRL  145 (336)
T ss_dssp             TCSEEEECCCCCCH------HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBCC
T ss_pred             CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCCC
Confidence            89999999996431      2334567889999999999999999986   2247999999976432           23


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc-------cCCC
Q 023553          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------NMQG  235 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  235 (280)
                      .+...|+.+|++.+.+++.++.++   |++++.+.|+.+.++......    ....   ..........       ....
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~  215 (336)
T 2hun_A          146 MPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEK----LIPK---TIIRASLGLKIPIYGTGKNVR  215 (336)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTS----HHHH---HHHHHHTTCCEEEETC---CE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCc----hHHH---HHHHHHcCCCceEeCCCCcee
Confidence            346789999999999999999884   799999999999998753210    0000   0111111110       1124


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       236 ~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .+++++|+|++++++++..   .+|++++++||..
T Consensus       216 ~~i~v~Dva~~~~~~~~~~---~~g~~~~v~~~~~  247 (336)
T 2hun_A          216 DWLYVEDHVRAIELVLLKG---ESREIYNISAGEE  247 (336)
T ss_dssp             EEEEHHHHHHHHHHHHHHC---CTTCEEEECCSCE
T ss_pred             eeEEHHHHHHHHHHHHhCC---CCCCEEEeCCCCc
Confidence            6789999999999998643   3789999999864

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.93  E-value=8.7e-25  Score=193.37  Aligned_cols=232  Identities=13%  Similarity=0.024  Sum_probs=171.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ++++++|||||+|+||+++++.|+++|++|++++|+.+......+.+.....+.++.+|+++++++.++++.+     ++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   81 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   81 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----CC
Confidence            5789999999999999999999999999999999987655444444433356788999999999988887754     79


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc------------cCC
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI------------GGL  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~------------~~~  163 (280)
                      |+|||+||...      ...+.+++++.+++|+.++.++++++.+.   ...++||++||.....            +..
T Consensus        82 d~vih~A~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~  152 (357)
T 1rkx_A           82 EIVFHMAAQPL------VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMG  152 (357)
T ss_dssp             SEEEECCSCCC------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             CEEEECCCCcc------cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCC
Confidence            99999998632      12345678899999999999999999874   2257999999986422            223


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHC------CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHH-hhhc-----
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELG------KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV-ARNA-----  231 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~------~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----  231 (280)
                      +...|+.+|++.+.+++.++.++.      +.|++++.+.||.+.++.....   ....    ..+.... ....     
T Consensus       153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~---~~~~----~~~~~~~~~g~~~~~~~  225 (357)
T 1rkx_A          153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL---DRIV----PDILRAFEQSQPVIIRN  225 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS---SCHH----HHHHHHHHTTCCEECSC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc---ccHH----HHHHHHHhcCCCEEECC
Confidence            467899999999999999999985      3489999999999999864211   0000    1111111 1111     


Q ss_pred             -cCCCCCCCHHHHHHHHHHhcCCC--CCceeecEEEeCCC
Q 023553          232 -NMQGTELTANDVANAVLFLASDE--ARYISGTNLMVDGG  268 (280)
Q Consensus       232 -~~~~~~~~~~dva~~i~~l~s~~--~~~~~G~~i~~dgG  268 (280)
                       .....++.++|+|++++.++...  .....|+++++.+|
T Consensus       226 ~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          226 PHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             TTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             CCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence             01236789999999999888521  11245788888864

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=5e-26  Score=190.64  Aligned_cols=198  Identities=14%  Similarity=0.080  Sum_probs=149.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++||||+|+||+++++.|+++|+  +|++++|+.+..+....     ..+.++.+|+++++++.++++      
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~------   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-----KNVNQEVVDFEKLDDYASAFQ------   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-----GGCEEEECCGGGGGGGGGGGS------
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc-----CCceEEecCcCCHHHHHHHhc------
Confidence            35789999999999999999999999999  99999998765432211     246788999999988766554      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                       ++|++|||||....         .+++++.+++|+.++..+++++.+    .+.++||++||..+..+  ....|+.+|
T Consensus        84 -~~d~vi~~ag~~~~---------~~~~~~~~~~n~~~~~~~~~~~~~----~~~~~iv~~SS~~~~~~--~~~~Y~~sK  147 (242)
T 2bka_A           84 -GHDVGFCCLGTTRG---------KAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADKS--SNFLYLQVK  147 (242)
T ss_dssp             -SCSEEEECCCCCHH---------HHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHH
T ss_pred             -CCCEEEECCCcccc---------cCCcccceeeeHHHHHHHHHHHHH----CCCCEEEEEccCcCCCC--CcchHHHHH
Confidence             89999999996421         245788999999999988887654    44579999999887643  456899999


Q ss_pred             HHHHHHHHHHHHHHCCCCe-EEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc---CCCCCCCHHHHHHHHH
Q 023553          173 HAVLGLNKNVAAELGKYGI-RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN---MQGTELTANDVANAVL  248 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dva~~i~  248 (280)
                      ++++.+++.+       ++ ++++|+||++.|++......  .       ..........+   ..+++++++|+|++++
T Consensus       148 ~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  211 (242)
T 2bka_A          148 GEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPG--E-------WLVRKFFGSLPDSWASGHSVPVVTVVRAML  211 (242)
T ss_dssp             HHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHH--H-------HHHHHHHCSCCTTGGGGTEEEHHHHHHHHH
T ss_pred             HHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHH--H-------HHHHHhhcccCccccCCcccCHHHHHHHHH
Confidence            9999998753       46 79999999999997432110  0       00000011111   0257899999999999


Q ss_pred             HhcCCCC
Q 023553          249 FLASDEA  255 (280)
Q Consensus       249 ~l~s~~~  255 (280)
                      ++++...
T Consensus       212 ~~~~~~~  218 (242)
T 2bka_A          212 NNVVRPR  218 (242)
T ss_dssp             HHHTSCC
T ss_pred             HHHhCcc
Confidence            9998654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.93  E-value=9.7e-25  Score=191.25  Aligned_cols=225  Identities=18%  Similarity=0.059  Sum_probs=157.1

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ++...+++++++|||||+|+||+++++.|+++|++|++++|+.+...+..+.+   ..+.++.+|+++.+++.++++++ 
T Consensus        12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l---~~v~~~~~Dl~d~~~~~~~~~~~-   87 (330)
T 2pzm_A           12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV---AGLSVIEGSVTDAGLLERAFDSF-   87 (330)
T ss_dssp             --CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC---TTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             cCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc---CCceEEEeeCCCHHHHHHHHhhc-
Confidence            33445688999999999999999999999999999999999755432111111   46788999999999988887754 


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----C-
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----L-  163 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----~-  163 (280)
                          ++|+|||+||....  .     +.++++  +++|+.++.++++++...    +.++||++||.++..+.     + 
T Consensus        88 ----~~D~vih~A~~~~~--~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~~~~iV~~SS~~~~~~~~~~~~~~  150 (330)
T 2pzm_A           88 ----KPTHVVHSAAAYKD--P-----DDWAED--AATNVQGSINVAKAASKA----GVKRLLNFQTALCYGRPATVPIPI  150 (330)
T ss_dssp             ----CCSEEEECCCCCSC--T-----TCHHHH--HHHHTHHHHHHHHHHHHH----TCSEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ----CCCEEEECCccCCC--c-----cccChh--HHHHHHHHHHHHHHHHHc----CCCEEEEecCHHHhCCCccCCCCc
Confidence                89999999997532  1     445666  999999999999999852    45799999998775433     2 


Q ss_pred             -----CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCC
Q 023553          164 -----GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL  238 (280)
Q Consensus       164 -----~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (280)
                           +...|+.+|++++.+++.+       ++....+.|+.+..+....... .........+. ... .... ...++
T Consensus       151 ~E~~~~~~~Y~~sK~~~e~~~~~~-------~~~~~~iR~~~v~gp~~~~~~~-~~~~~~~~~~~-~~~-~~~~-~~~~i  219 (330)
T 2pzm_A          151 DSPTAPFTSYGISKTAGEAFLMMS-------DVPVVSLRLANVTGPRLAIGPI-PTFYKRLKAGQ-KCF-CSDT-VRDFL  219 (330)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHTC-------SSCEEEEEECEEECTTCCSSHH-HHHHHHHHTTC-CCC-EESC-EECEE
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHc-------CCCEEEEeeeeeECcCCCCCHH-HHHHHHHHcCC-EEe-CCCC-Eecce
Confidence                 5678999999999999876       3444555555554443200000 00000000000 000 0001 25688


Q ss_pred             CHHHHHH-HHHHhcCCCCCceeecEEEeCCCcc
Q 023553          239 TANDVAN-AVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       239 ~~~dva~-~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++|+|+ +++++++...    |++++++||..
T Consensus       220 ~~~Dva~~a~~~~~~~~~----g~~~~v~~~~~  248 (330)
T 2pzm_A          220 DMSDFLAIADLSLQEGRP----TGVFNVSTGEG  248 (330)
T ss_dssp             EHHHHHHHHHHHTSTTCC----CEEEEESCSCC
T ss_pred             eHHHHHHHHHHHHhhcCC----CCEEEeCCCCC
Confidence            9999999 9999997632    89999999854

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.92  E-value=7.5e-25  Score=180.94  Aligned_cols=193  Identities=16%  Similarity=0.181  Sum_probs=155.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHhCCccEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~l   98 (280)
                      +++||||+|+||+++++.|+++|++|++++|+.+..+..       ..+.++.+|++| ++++.++++       ++|+|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~-------~~d~v   67 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-------NNVKAVHFDVDWTPEEMAKQLH-------GMDAI   67 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-------TTEEEEECCTTSCHHHHHTTTT-------TCSEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-------CCceEEEecccCCHHHHHHHHc-------CCCEE
Confidence            699999999999999999999999999999998754321       468899999999 888766654       79999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC-------Cccchhh
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-------PHAYTGS  171 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~-------~~~Y~~s  171 (280)
                      ||+||....              +.+++|+.+...+++++..    .+.++||++||..+..+.+.       ...|+.+
T Consensus        68 i~~ag~~~~--------------~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~s  129 (219)
T 3dqp_A           68 INVSGSGGK--------------SLLKVDLYGAVKLMQAAEK----AEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIA  129 (219)
T ss_dssp             EECCCCTTS--------------SCCCCCCHHHHHHHHHHHH----TTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHH
T ss_pred             EECCcCCCC--------------CcEeEeHHHHHHHHHHHHH----hCCCEEEEECcccccCCCcccccccccccHHHHH
Confidence            999997632              2788999999998888754    44579999999988776655       7799999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |++.+.+.+      ...|++++.+.||++.++.........                  .....+++++|+|+++++++
T Consensus       130 K~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~~------------------~~~~~~i~~~Dva~~i~~~l  185 (219)
T 3dqp_A          130 KHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDIN------------------DEVSASNTIGDVADTIKELV  185 (219)
T ss_dssp             HHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEES------------------SSCCCCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHH------hccCCcEEEEeCceEecCCCCCccccC------------------CCcCCcccHHHHHHHHHHHH
Confidence            999999886      357899999999999987543322110                  12267899999999999999


Q ss_pred             CCCCCceeecEEEeCCCcc
Q 023553          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      ...  ...|+++++++|..
T Consensus       186 ~~~--~~~g~~~~i~~g~~  202 (219)
T 3dqp_A          186 MTD--HSIGKVISMHNGKT  202 (219)
T ss_dssp             TCG--GGTTEEEEEEECSE
T ss_pred             hCc--cccCcEEEeCCCCc
Confidence            753  35599999988753

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.92  E-value=2.2e-24  Score=190.47  Aligned_cols=232  Identities=13%  Similarity=0.029  Sum_probs=170.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc----hHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN----LGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~----~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .+++++++|||||+|+||+++++.|+++|++|++++|+..    .++.+.+.+..  ...+.++.+|+++.+++.++++ 
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-  101 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-  101 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-
Confidence            3467899999999999999999999999999999999754    23333332221  1467889999999988876665 


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC----
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----  163 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~----  163 (280)
                            ++|+|||+||....      ..+.+++++.+++|+.++.++++++.+.    +.++||++||.....+.+    
T Consensus       102 ------~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~  165 (352)
T 1sb8_A          102 ------GVDYVLHQAALGSV------PRSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPGLPK  165 (352)
T ss_dssp             ------TCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSB
T ss_pred             ------CCCEEEECCcccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeccHHhcCCCCCCCC
Confidence                  89999999997532      1234668899999999999999998763    457999999987754432    


Q ss_pred             -------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhh-HHHHhhhcc---
Q 023553          164 -------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVARNAN---  232 (280)
Q Consensus       164 -------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---  232 (280)
                             +...|+.+|++.+.+++.++.++   |++++.+.||.+.++............    ..+ .........   
T Consensus       166 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  238 (352)
T 1sb8_A          166 VEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVI----PKWTSSMIQGDDVYIN  238 (352)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHH----HHHHHHHHHTCCCEEE
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHH----HHHHHHHHCCCCcEEe
Confidence                   35789999999999999998885   799999999999998754321100000    001 111111110   


Q ss_pred             ----CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          233 ----MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 ----~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                          ....++.++|+|++++.++... ....|+++++++|..
T Consensus       239 g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~  279 (352)
T 1sb8_A          239 GDGETSRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGR  279 (352)
T ss_dssp             SSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCC
T ss_pred             CCCCceEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCC
Confidence                1136889999999999988642 245789999998753

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.92  E-value=2.9e-24  Score=188.68  Aligned_cols=232  Identities=17%  Similarity=0.101  Sum_probs=161.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH-HHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ++|++|||||+|+||+++++.|+++|++|++++|+.+... ...+.+.....+.++.+|++|.+++.++++.+     ++
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   76 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----QP   76 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----CC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----CC
Confidence            5789999999999999999999999999999999876432 12233322346788899999999998888765     79


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-----------ccCCC
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-----------IGGLG  164 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-----------~~~~~  164 (280)
                      |+|||+||....      +.+.+++++.+++|+.++.++++++.+.   ...++||++||.+..           .+..+
T Consensus        77 d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~  147 (345)
T 2z1m_A           77 DEVYNLAAQSFV------GVSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFYQASTSEMFGKVQEIPQTEKTPFYP  147 (345)
T ss_dssp             SEEEECCCCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred             CEEEECCCCcch------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCCCCCCccCCCCC
Confidence            999999997531      1234568899999999999999999863   113799999998643           22345


Q ss_pred             CccchhhHHHHHHHHHHHHHHHC---CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhH-HHHhhhccCCCCCCCH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELG---KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR-NFVARNANMQGTELTA  240 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  240 (280)
                      ...|+.+|++.+.+++.++.++.   ..++.++.+.||...|.+......   .......+.. ............++++
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v  224 (345)
T 2z1m_A          148 RSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITY---SLARIKYGLQDKLVLGNLNAKRDWGYA  224 (345)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHH---HHHHHHTTSCSCEEESCTTCEECCEEH
T ss_pred             CChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHH---HHHHHHcCCCCeeeeCCCCceeeeEEH
Confidence            67899999999999999999875   334566777788776654211000   0000000000 0000000111358999


Q ss_pred             HHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          241 NDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       241 ~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      +|+|++++++++...    ++.+++.+|.
T Consensus       225 ~Dva~a~~~~~~~~~----~~~~~i~~~~  249 (345)
T 2z1m_A          225 PEYVEAMWLMMQQPE----PDDYVIATGE  249 (345)
T ss_dssp             HHHHHHHHHHHTSSS----CCCEEECCSC
T ss_pred             HHHHHHHHHHHhCCC----CceEEEeCCC
Confidence            999999999997543    3567776664

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.92  E-value=2.6e-24  Score=180.86  Aligned_cols=217  Identities=11%  Similarity=0.003  Sum_probs=158.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKH--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++|+++||||+|+||++++++|+++  |++|++++|+.+..++.      ...+.++.+|+++.+++.++++       
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~-------   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------GGEADVFIGDITDADSINPAFQ-------   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc------CCCeeEEEecCCCHHHHHHHHc-------
Confidence            35789999999999999999999999  89999999987655432      2356688999999998877665       


Q ss_pred             CccEEEECCCCCCCCCC-------CCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           94 TLDIMVNNAGISGAPCP-------DIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                      ++|++||+||.......       ...+...+++.+.+++|+.+..++++++.+.    +.++||++||..+..+..+..
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~  144 (253)
T 1xq6_A           69 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPDHPLN  144 (253)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTTCGGG
T ss_pred             CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CCCEEEEEcCccCCCCCCccc
Confidence            79999999997642100       0122234455678899999999998888653    347999999998765544444


Q ss_pred             c-----chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHH
Q 023553          167 A-----YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       167 ~-----Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      .     |+.+|++++.+++.       .|++++.+.||.+.++............ .      ... .  . ..++++++
T Consensus       145 ~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~-~------~~~-~--~-~~~~~~~~  206 (253)
T 1xq6_A          145 KLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKD-D------ELL-Q--T-DTKTVPRA  206 (253)
T ss_dssp             GGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEEST-T------GGG-G--S-SCCEEEHH
T ss_pred             cccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCC-c------CCc-C--C-CCcEEcHH
Confidence            4     55589999887753       6899999999999998643211000000 0      000 0  1 14688999


Q ss_pred             HHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          242 DVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       242 dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      |+|++++++++..  ...|++++++||-
T Consensus       207 Dva~~~~~~~~~~--~~~g~~~~i~~~~  232 (253)
T 1xq6_A          207 DVAEVCIQALLFE--EAKNKAFDLGSKP  232 (253)
T ss_dssp             HHHHHHHHHTTCG--GGTTEEEEEEECC
T ss_pred             HHHHHHHHHHcCc--cccCCEEEecCCC
Confidence            9999999999753  3478999999863

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.92  E-value=3e-24  Score=189.00  Aligned_cols=230  Identities=14%  Similarity=0.072  Sum_probs=161.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcc-hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDN-LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +++.+++++|||||+|+||+++++.|+++|  +.|++.+|... ......+.+.....+.++.+|++|.+++.++++.. 
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   97 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-   97 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-
Confidence            445789999999999999999999999999  67887777642 11111122222357889999999999998888753 


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC------
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL------  163 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~------  163 (280)
                          ++|+|||+||....      ..+.++++..+++|+.+..++++++...    +.++||++||.+.....+      
T Consensus        98 ----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vy~~~~~~~~~~  163 (346)
T 4egb_A           98 ----DVQVIVNFAAESHV------DRSIENPIPFYDTNVIGTVTLLELVKKY----PHIKLVQVSTDEVYGSLGKTGRFT  163 (346)
T ss_dssp             ----TCCEEEECCCCC---------------CHHHHHHTHHHHHHHHHHHHS----TTSEEEEEEEGGGGCCCCSSCCBC
T ss_pred             ----CCCEEEECCcccch------hhhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeCchHHhCCCCcCCCcC
Confidence                79999999997643      1245677889999999999999988763    457899999976544321      


Q ss_pred             ------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh-------
Q 023553          164 ------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN-------  230 (280)
Q Consensus       164 ------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  230 (280)
                            +...|+.+|.+.+.+++.++.++   |++++.+.|+.+.++...........       ........       
T Consensus       164 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~  233 (346)
T 4egb_A          164 EETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLM-------VTNALEGKKLPLYGD  233 (346)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHH-------HHHHHTTCCCEEETT
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHH-------HHHHHcCCCceeeCC
Confidence                  24789999999999999998884   79999999999998864322110000       01111111       


Q ss_pred             ccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          231 ANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       231 ~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ......++.++|+|++++.++....   .|+++++.||..
T Consensus       234 ~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~  270 (346)
T 4egb_A          234 GLNVRDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNE  270 (346)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCC
T ss_pred             CCeEEeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCc
Confidence            0111356789999999999997543   789999999864

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=1.5e-24  Score=181.35  Aligned_cols=201  Identities=14%  Similarity=0.069  Sum_probs=140.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ..|++|||||+|+||+++++.|+++| ++|++++|+.+.+.+.     ....+.++.+|++|++++.++++       ++
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~-------~~   89 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-----YPTNSQIIMGDVLNHAALKQAMQ-------GQ   89 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-----CCTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-----ccCCcEEEEecCCCHHHHHHHhc-------CC
Confidence            36899999999999999999999999 8999999998754321     12468889999999999887766       78


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc--------
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA--------  167 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~--------  167 (280)
                      |+||||+|...             +           ...++.+++.|++.+.++||++||..+..+.++...        
T Consensus        90 D~vv~~a~~~~-------------~-----------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~  145 (236)
T 3qvo_A           90 DIVYANLTGED-------------L-----------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIG  145 (236)
T ss_dssp             SEEEEECCSTT-------------H-----------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------C
T ss_pred             CEEEEcCCCCc-------------h-----------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhccc
Confidence            99999998521             0           123567788887777789999999887665443211        


Q ss_pred             -chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          168 -YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       168 -Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                       +...+...       ...+.+.||+++.|+||++.++........               ....+..+++++++|+|++
T Consensus       146 ~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~---------------~~~~~~~~~~i~~~DvA~~  203 (236)
T 3qvo_A          146 EPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYELT---------------SRNEPFKGTIVSRKSVAAL  203 (236)
T ss_dssp             GGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEEE---------------CTTSCCSCSEEEHHHHHHH
T ss_pred             chHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEEe---------------ccCCCCCCcEECHHHHHHH
Confidence             11122221       122346799999999999988754321100               0111223678999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCcccc-cCcc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTSV-NHSL  276 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~~-~~~~  276 (280)
                      ++++++....++ |+.+.++++.... .++|
T Consensus       204 i~~ll~~~~~~~-g~~~~i~~~~~~~~~~~~  233 (236)
T 3qvo_A          204 ITDIIDKPEKHI-GENIGINQPGTDGDKPFF  233 (236)
T ss_dssp             HHHHHHSTTTTT-TEEEEEECSSCCCCSSCC
T ss_pred             HHHHHcCccccc-CeeEEecCCCCCCCCCCc
Confidence            999998766555 8899998877655 3443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.91  E-value=5.1e-24  Score=187.62  Aligned_cols=220  Identities=14%  Similarity=0.089  Sum_probs=162.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcch-HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           19 RVALITGGATGIGESTVRLFHKH--GAKVCIADVQDNL-GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      |++|||||+|+||+++++.|+++  |++|++++|+... ..+..+.+. ...+.++.+|+++++++.++++       .+
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-------~~   76 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDIADAELVDKLAA-------KA   76 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-SSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc-cCCeEEEECCCCCHHHHHHHhh-------cC
Confidence            78999999999999999999999  8999999986521 111112222 2467889999999988776665       67


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc---------------
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI---------------  160 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~---------------  160 (280)
                      |+|||+||....      +.+.+++++.+++|+.++.++++++.+.    + ++||++||.+...               
T Consensus        77 d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~  145 (348)
T 1oc2_A           77 DAIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGP  145 (348)
T ss_dssp             SEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             CEEEECCcccCc------cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccccccc
Confidence            999999996531      2234567889999999999999999885    2 4999999976431               


Q ss_pred             --------cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc-
Q 023553          161 --------GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-  231 (280)
Q Consensus       161 --------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  231 (280)
                              +..+...|+.+|++.+.+++.++.++   |++++.+.||.+.++..........       .......... 
T Consensus       146 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~-------~~~~~~~~~~~  215 (348)
T 1oc2_A          146 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPR-------QITNILAGIKP  215 (348)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHH-------HHHHHHHTCCC
T ss_pred             CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHH-------HHHHHHcCCCc
Confidence                    12345789999999999999999886   7999999999999987532100000       0111111110 


Q ss_pred             ------cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          232 ------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 ------~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                            .....+++++|+|++++++++..   .+|++++++||..
T Consensus       216 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~  257 (348)
T 1oc2_A          216 KLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGE  257 (348)
T ss_dssp             EEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCE
T ss_pred             eEecCCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCC
Confidence                  11246889999999999999643   3789999999853

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.91  E-value=9.1e-24  Score=186.30  Aligned_cols=233  Identities=12%  Similarity=0.002  Sum_probs=170.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC------CCeEEEecCCCCHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE------PDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      +.+++|++|||||+|+||+++++.|+++|+.|++++|+........+.+...      ..+.++.+|+++.+++.++++ 
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence            4468999999999999999999999999999999999765433332222111      468899999999988776665 


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC----
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----  163 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~----  163 (280)
                            ++|+|||+||....      ..+.+++...+++|+.+..++++++...    +-.+||++||.+.....+    
T Consensus       100 ------~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vyg~~~~~~~  163 (351)
T 3ruf_A          100 ------GVDHVLHQAALGSV------PRSIVDPITTNATNITGFLNILHAAKNA----QVQSFTYAASSSTYGDHPALPK  163 (351)
T ss_dssp             ------TCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSB
T ss_pred             ------CCCEEEECCccCCc------chhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEecHHhcCCCCCCCC
Confidence                  89999999996432      2344567889999999999999988663    346999999987654322    


Q ss_pred             -------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc-----
Q 023553          164 -------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-----  231 (280)
Q Consensus       164 -------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  231 (280)
                             +...|+.+|.+.+.+++.++.++   |+++..+.|+.+.++..............   ..........     
T Consensus       164 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g  237 (351)
T 3ruf_A          164 VEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPK---WTAAMLKGDDVYING  237 (351)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHH---HHHHHHHTCCCEEES
T ss_pred             ccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHH---HHHHHHcCCCcEEeC
Confidence                   24689999999999999998885   79999999999998865432111000000   0111111111     


Q ss_pred             --cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          232 --NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 --~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                        .....++.++|+|++++.++... ....|+++++.+|..
T Consensus       238 ~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~  277 (351)
T 3ruf_A          238 DGETSRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDR  277 (351)
T ss_dssp             SSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCC
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCc
Confidence              11236788999999999988642 356789999988753

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.91  E-value=7.8e-24  Score=188.84  Aligned_cols=230  Identities=13%  Similarity=0.079  Sum_probs=162.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+.+++++++||||+|+||+++++.|+++| ++|++++|+.....+   .+.....+.++.+|+++++++.++++     
T Consensus        27 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~~~~~v~~~~~Dl~d~~~l~~~~~-----   98 (377)
T 2q1s_A           27 ASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVPDHPAVRFSETSITDDALLASLQD-----   98 (377)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSCCCTTEEEECSCTTCHHHHHHCCS-----
T ss_pred             hHHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hccCCCceEEEECCCCCHHHHHHHhh-----
Confidence            345789999999999999999999999999 999999998654221   12123468889999999988765544     


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccc----------
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAI----------  160 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~----------  160 (280)
                        ++|+|||+||....      ..+.+++++.+++|+.+..++++++..    . +.++||++||.+...          
T Consensus        99 --~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~vyg~~~~~~~~~~  166 (377)
T 2q1s_A           99 --EYDYVFHLATYHGN------QSSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCSIAEKTFDDAKAT  166 (377)
T ss_dssp             --CCSEEEECCCCSCH------HHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC--------------
T ss_pred             --CCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHHcCCCCCCCcCcc
Confidence              89999999986532      123456788999999999999888743    3 446999999976421          


Q ss_pred             ------cC-CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCC----cchh-hhhhhhhhHHHHh
Q 023553          161 ------GG-LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP----EEER-TEDAMVGFRNFVA  228 (280)
Q Consensus       161 ------~~-~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~----~~~~-~~~~~~~~~~~~~  228 (280)
                            +. .+...|+.+|++.+.+++.++.++   |++++.+.||.+.++.......    .... .......+.....
T Consensus       167 E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  243 (377)
T 2q1s_A          167 EETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKAL  243 (377)
T ss_dssp             CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHH
T ss_pred             cccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHH
Confidence                  21 345789999999999999998875   7999999999999986510000    0000 0000011111111


Q ss_pred             hhcc--------CCCCCCCHHHHHHH-HHHhcCCCCCceeecEEEeCCCc
Q 023553          229 RNAN--------MQGTELTANDVANA-VLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       229 ~~~~--------~~~~~~~~~dva~~-i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      +..+        ....++.++|+|++ ++.++....   +| ++++++|.
T Consensus       244 ~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~  289 (377)
T 2q1s_A          244 KGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGK  289 (377)
T ss_dssp             TTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCC
T ss_pred             cCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCC
Confidence            1111        12357789999999 999987543   68 99999874

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.91  E-value=1.5e-23  Score=184.14  Aligned_cols=211  Identities=12%  Similarity=0.067  Sum_probs=154.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      +++|||||+|+||+++++.|+++|++|++++|+....+.+.+     ..+.++.+|++|.+++.++++       ++|+|
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   81 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY-----LEPECRVAEMLDHAGLERALR-------GLDGV   81 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG-----GCCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc-----CCeEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            489999999999999999999999999999998765433211     256788999999988776654       79999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC--------------
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG--------------  164 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~--------------  164 (280)
                      ||+||...        .+.+++++.+++|+.+..++++++.+.    +.++||++||.+...+.+.              
T Consensus        82 ih~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~  149 (342)
T 2x4g_A           82 IFSAGYYP--------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP  149 (342)
T ss_dssp             EEC--------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred             EECCccCc--------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence            99999642        234567889999999999999999874    3479999999887654433              


Q ss_pred             --CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceecccc-ccCCCcchhhhhhhhhhHHHHhhhcc----CCCCC
Q 023553          165 --PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA-LAHLPEEERTEDAMVGFRNFVARNAN----MQGTE  237 (280)
Q Consensus       165 --~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  237 (280)
                        ...|+.+|++.+.+++.++.   . |++++.+.||.+.++.. .....  ..       ..........    ....+
T Consensus       150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~  216 (342)
T 2x4g_A          150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTG--RV-------ITAIGNGEMTHYVAGQRNV  216 (342)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTT--HH-------HHHHHTTCCCEEECCEEEE
T ss_pred             cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHH--HH-------HHHHHcCCCccccCCCcce
Confidence              67899999999999999876   3 79999999999999875 21111  00       1111111111    11347


Q ss_pred             CCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          238 LTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       238 ~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++++|+|++++.+++...   .|++++++||.
T Consensus       217 i~v~Dva~~~~~~~~~~~---~g~~~~v~~~~  245 (342)
T 2x4g_A          217 IDAAEAGRGLLMALERGR---IGERYLLTGHN  245 (342)
T ss_dssp             EEHHHHHHHHHHHHHHSC---TTCEEEECCEE
T ss_pred             eeHHHHHHHHHHHHhCCC---CCceEEEcCCc
Confidence            899999999999997543   28999999986

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.91  E-value=2.8e-23  Score=182.22  Aligned_cols=224  Identities=17%  Similarity=0.122  Sum_probs=153.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH--hCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS--LGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~--~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++|++|||||+|+||++++++|+++|++|+++.|+.+...+....  +.. ...+.++.+|+++.+++.++++      
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK------   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence            4689999999999999999999999999999999987643332221  111 1247788999999988776654      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC---------
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL---------  163 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~---------  163 (280)
                       ++|+|||+|+...     +..  .+..++.+++|+.+..++++++.+..   ..++||++||.++..+.+         
T Consensus        77 -~~d~Vih~A~~~~-----~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~  145 (337)
T 2c29_D           77 -GCTGVFHVATPMD-----FES--KDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDES  145 (337)
T ss_dssp             -TCSEEEECCCCCC-----SSC--SSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTT
T ss_pred             -CCCEEEEeccccC-----CCC--CChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcc
Confidence             7899999998541     111  22345789999999999999998753   247999999987544221         


Q ss_pred             -------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh-hhhhhhHHHHhh
Q 023553          164 -------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVAR  229 (280)
Q Consensus       164 -------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~  229 (280)
                                   ....|+.||++.+.+++.++.+   +|++++.+.|+.+.++......+...... ....+.... ..
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~-~~  221 (337)
T 2c29_D          146 CWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAH-YS  221 (337)
T ss_dssp             CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGG-HH
T ss_pred             cCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcc-cc
Confidence                         2236999999999999887765   47999999999999997544322110000 000000000 00


Q ss_pred             hccCCCCCCCHHHHHHHHHHhcCCCCCceeecEE
Q 023553          230 NANMQGTELTANDVANAVLFLASDEARYISGTNL  263 (280)
Q Consensus       230 ~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i  263 (280)
                      .. ...++++++|+|++++++++..  ...|.++
T Consensus       222 ~~-~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~  252 (337)
T 2c29_D          222 II-RQGQFVHLDDLCNAHIYLFENP--KAEGRYI  252 (337)
T ss_dssp             HH-TEEEEEEHHHHHHHHHHHHHCT--TCCEEEE
T ss_pred             cc-CCCCEEEHHHHHHHHHHHhcCc--ccCceEE
Confidence            00 1245899999999999998642  3456543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.91  E-value=6.6e-23  Score=167.03  Aligned_cols=198  Identities=13%  Similarity=0.081  Sum_probs=148.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +++++||||+|+||++++++|+++|++|++++|+.+.....     ....+.++.+|+++++++.++++       ++|+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   70 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----GPRPAHVVVGDVLQAADVDKTVA-------GQDA   70 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----SCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-----cCCceEEEEecCCCHHHHHHHHc-------CCCE
Confidence            37899999999999999999999999999999987654211     12467889999999998876665       7899


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC----CCccchhhHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----GPHAYTGSKH  173 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~----~~~~Y~~sK~  173 (280)
                      +||+||....  .     +.      .++|+.+...+++++.+.    +.++||++||.......+    ....|+.+|+
T Consensus        71 vi~~a~~~~~--~-----~~------~~~n~~~~~~~~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~  133 (206)
T 1hdo_A           71 VIVLLGTRND--L-----SP------TTVMSEGARNIVAAMKAH----GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI  133 (206)
T ss_dssp             EEECCCCTTC--C-----SC------CCHHHHHHHHHHHHHHHH----TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred             EEECccCCCC--C-----Cc------cchHHHHHHHHHHHHHHh----CCCeEEEEeeeeeccCcccccccchhHHHHHH
Confidence            9999997532  1     11      247888888888777653    357999999987665444    5678999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCce-eccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAV-ATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +++.+++.       .|++++.+.||.+ .++.... +...         .     ...+. +.+++++|+|++++++++
T Consensus       134 ~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~-~~~~---------~-----~~~~~-~~~i~~~Dva~~~~~~~~  190 (206)
T 1hdo_A          134 RMHKVLRE-------SGLKYVAVMPPHIGDQPLTGA-YTVT---------L-----DGRGP-SRVISKHDLGHFMLRCLT  190 (206)
T ss_dssp             HHHHHHHH-------TCSEEEEECCSEEECCCCCSC-CEEE---------S-----SSCSS-CSEEEHHHHHHHHHHTTS
T ss_pred             HHHHHHHh-------CCCCEEEEeCCcccCCCCCcc-eEec---------c-----cCCCC-CCccCHHHHHHHHHHHhc
Confidence            99998842       5899999999998 3332211 1000         0     00111 578899999999999997


Q ss_pred             CCCCceeecEEEeCCCc
Q 023553          253 DEARYISGTNLMVDGGF  269 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~  269 (280)
                      ..  ..+|+++.++||.
T Consensus       191 ~~--~~~g~~~~i~~g~  205 (206)
T 1hdo_A          191 TD--EYDGHSTYPSHQY  205 (206)
T ss_dssp             CS--TTTTCEEEEECCC
T ss_pred             Cc--cccccceeeeccc
Confidence            64  3689999999985

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.90  E-value=1.1e-23  Score=182.95  Aligned_cols=218  Identities=16%  Similarity=0.101  Sum_probs=159.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      ++|||||+|+||+++++.|+++|++|++++|..+...   +.+.  ..+.++.+|+++++++.++++..     ++|++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~~--~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi   71 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVP--KGVPFFRVDLRDKEGVERAFREF-----RPTHVS   71 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGSC--TTCCEECCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhcc--cCeEEEECCCCCHHHHHHHHHhc-----CCCEEE
Confidence            6999999999999999999999999999988543211   1111  24567889999999988777642     799999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-------------CCCc
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-------------LGPH  166 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-------------~~~~  166 (280)
                      |+|+....      ..+.+++.+.+++|+.+++++++++..    .+.++||++||..+..+.             .+..
T Consensus        72 ~~a~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~  141 (311)
T 2p5y_A           72 HQAAQASV------KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKS  141 (311)
T ss_dssp             ECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCS
T ss_pred             ECccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCC
Confidence            99986432      134566889999999999999998864    335799999998222211             2356


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhh-HHHHhhh------------ccC
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVARN------------ANM  233 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~------------~~~  233 (280)
                      .|+.||++.+.+++.++.++   |++++.+.|+.+.++......... .    ...+ .......            ...
T Consensus       142 ~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~g~~  213 (311)
T 2p5y_A          142 PYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAG-V----VAIFAERVLKGLPVTLYARKTPGDEGC  213 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTH-H----HHHHHHHHHHTCCEEEECSSSTTSCCC
T ss_pred             hHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCc-H----HHHHHHHHHcCCCcEEEecccCCCCCe
Confidence            89999999999999998885   799999999999998753321100 0    0001 1111111            011


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       234 ~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++++|+|++++++++..     |+.+++++|..
T Consensus       214 ~~~~i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~  245 (311)
T 2p5y_A          214 VRDYVYVGDVAEAHALALFSL-----EGIYNVGTGEG  245 (311)
T ss_dssp             EECEEEHHHHHHHHHHHHHHC-----CEEEEESCSCC
T ss_pred             EEeeEEHHHHHHHHHHHHhCC-----CCEEEeCCCCC
Confidence            246788999999999998642     78999998854

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.90  E-value=2.3e-23  Score=183.45  Aligned_cols=225  Identities=10%  Similarity=0.026  Sum_probs=157.2

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.+.++++|+||||||+|+||+++++.|+++|++|++++|+.+.           ..+.++.+|+++.+++.++++    
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~----   76 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIM----   76 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHT----
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHh----
Confidence            34567899999999999999999999999999999999998764           356688999999998876665    


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc---------
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG---------  161 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~---------  161 (280)
                         ++|++||+|+...        .+.++++..+++|+.+..++++++..    .+.++||++||......         
T Consensus        77 ---~~d~vih~A~~~~--------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~~~~  141 (347)
T 4id9_A           77 ---GVSAVLHLGAFMS--------WAPADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFLPVT  141 (347)
T ss_dssp             ---TCSEEEECCCCCC--------SSGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSSSBC
T ss_pred             ---CCCEEEECCcccC--------cchhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCCCcC
Confidence               8999999998653        23345689999999999999998865    34579999999655432         


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCcee-------------ccccccCCCcch---hhhhhhh
Q 023553          162 ----GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVA-------------TGLALAHLPEEE---RTEDAMV  221 (280)
Q Consensus       162 ----~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~-------------t~~~~~~~~~~~---~~~~~~~  221 (280)
                          ..+...|+.+|.+.+.+++.++.+   .|+++..+.|+.+.             .+..........   .......
T Consensus       142 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~  218 (347)
T 4id9_A          142 EDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIA  218 (347)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHH
T ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHH
Confidence                234578999999999999999887   48999999999998             332110000000   0000001


Q ss_pred             hhHHHHhhhcc--------CCCCC----CCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          222 GFRNFVARNAN--------MQGTE----LTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       222 ~~~~~~~~~~~--------~~~~~----~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .+........+        ....+    ++++|+|++++.++....  ..|+++++.+|..
T Consensus       219 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~  277 (347)
T 4id9_A          219 ELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEP  277 (347)
T ss_dssp             HHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSC
T ss_pred             HHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCc
Confidence            11111111110        11345    889999999999996542  4588999988753

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.90  E-value=5.1e-23  Score=180.48  Aligned_cols=220  Identities=15%  Similarity=0.039  Sum_probs=154.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ..++++++|||||+|+||+++++.|+++|++|++++|+.....+   .+.....+.++.+|+++.+++.++++.     +
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~~~~~~~~~~Dl~d~~~~~~~~~~-----~   88 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKDHPNLTFVEGSIADHALVNQLIGD-----L   88 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCCCTTEEEEECCTTCHHHHHHHHHH-----H
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhhcCCceEEEEeCCCHHHHHHHHhc-----c
Confidence            34678999999999999999999999999999999997643211   111114678899999999998887764     2


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc----cC-------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI----GG-------  162 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~----~~-------  162 (280)
                      ++|+|||+||....  .     +.++++  +++|+.++.++++++.+    .+.++||++||.+...    ..       
T Consensus        89 ~~D~vih~A~~~~~--~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~  155 (333)
T 2q1w_A           89 QPDAVVHTAASYKD--P-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHP  155 (333)
T ss_dssp             CCSEEEECCCCCSC--T-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSC
T ss_pred             CCcEEEECceecCC--C-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCC
Confidence            79999999997542  1     334555  99999999999999987    3457999999977653    21       


Q ss_pred             -CCC-ccchhhHHHHHHHHHH-HHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCC
Q 023553          163 -LGP-HAYTGSKHAVLGLNKN-VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT  239 (280)
Q Consensus       163 -~~~-~~Y~~sK~al~~~~~~-la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (280)
                       .+. ..|+.+|++.+.+++. ++        .+..+.|+.+..+... .............+. .. .. ......+++
T Consensus       156 ~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~-~~~~~~~~~~~~~~~-~~-~~-~~~~~~~i~  223 (333)
T 2q1w_A          156 RNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNV-SGPLPIFFQRLSEGK-KC-FV-TKARRDFVF  223 (333)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCC-SSHHHHHHHHHHTTC-CC-EE-EECEECEEE
T ss_pred             CCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCc-CcHHHHHHHHHHcCC-ee-eC-CCceEeeEE
Confidence             233 7899999999999987 64        5677888888777511 000000000000000 00 00 112357889


Q ss_pred             HHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          240 ANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       240 ~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+|++++++++...    |++++++||..
T Consensus       224 v~Dva~ai~~~~~~~~----g~~~~v~~~~~  250 (333)
T 2q1w_A          224 VKDLARATVRAVDGVG----HGAYHFSSGTD  250 (333)
T ss_dssp             HHHHHHHHHHHHTTCC----CEEEECSCSCC
T ss_pred             HHHHHHHHHHHHhcCC----CCEEEeCCCCC
Confidence            9999999999997543    89999998864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.90  E-value=4.2e-23  Score=182.99  Aligned_cols=225  Identities=16%  Similarity=0.068  Sum_probs=157.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHH--cCCeEEEEecCcchHHHH---------HHHhCCCCCeEEEecCCCCHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHK--HGAKVCIADVQDNLGQQV---------CQSLGGEPDTFFCHCDVTKEEDV   81 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~--~g~~Vi~~~r~~~~~~~~---------~~~~~~~~~~~~~~~D~~~~~~~   81 (280)
                      .+++++|+||||||+|+||+++++.|++  .|++|++++|+.......         .... ....+.++.+|+++++++
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL-IGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG-TTCCSEEEECCTTCHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc-cccCceEEECCCCCHHHH
Confidence            4568899999999999999999999999  899999999976521100         0011 123568899999999988


Q ss_pred             HHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc
Q 023553           82 CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG  161 (280)
Q Consensus        82 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~  161 (280)
                      .++      ...++|+|||+||...        .+.+++++.+++|+.++.++++++...     +++||++||.+....
T Consensus        84 ~~~------~~~~~D~vih~A~~~~--------~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~~~~V~~SS~~vyg~  144 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSD--------TTMLNQELVMKTNYQAFLNLLEIARSK-----KAKVIYASSAGVYGN  144 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCG--------GGCCCHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEEEEGGGGCS
T ss_pred             HHh------hccCCCEEEECCccCC--------ccccCHHHHHHHHHHHHHHHHHHHHHc-----CCcEEEeCcHHHhCC
Confidence            765      2358999999999642        134567899999999999999998542     356999999554332


Q ss_pred             C----------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHH-HHhhh
Q 023553          162 G----------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRN-FVARN  230 (280)
Q Consensus       162 ~----------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~  230 (280)
                      .          .+...|+.+|++.+.+++.++.+     +.+..+.|+.+..+...........    ...+.. .....
T Consensus       145 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~----~~~~~~~~~~~~  215 (362)
T 3sxp_A          145 TKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASM----VLQLALGAMAFK  215 (362)
T ss_dssp             CCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCH----HHHHHHHHHTTS
T ss_pred             CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhH----HHHHHHHHHhCC
Confidence            1          12346999999999999887655     6788888888887754322100000    001111 11111


Q ss_pred             c-------cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          231 A-------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       231 ~-------~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .       .....++.++|+|++++++++...   +| ++++++|..
T Consensus       216 ~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~  258 (362)
T 3sxp_A          216 EVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQA  258 (362)
T ss_dssp             EEECSGGGCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCE
T ss_pred             CeEEECCCCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCC
Confidence            0       112357889999999999997543   68 999988754

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.90  E-value=2.4e-23  Score=182.62  Aligned_cols=220  Identities=15%  Similarity=0.141  Sum_probs=160.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc---C---CeEEEEecCcc--hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHKH---G---AKVCIADVQDN--LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~---g---~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++|||||+|+||+++++.|+++   |   ++|++++|+..  ..+. .+.+.....+.++.+|+++++++.+++      
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~------   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN-LAPVDADPRLRFVHGDIRDAGLLAREL------   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGG-GGGGTTCTTEEEEECCTTCHHHHHHHT------
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhh-hhhcccCCCeEEEEcCCCCHHHHHHHh------
Confidence            6999999999999999999997   8   99999998642  1111 122222346888999999998877665      


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-----------
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------  160 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-----------  160 (280)
                       +++|+|||+||....      +.+.+++++.+++|+.++.++++++.+.    +.++||++||.+...           
T Consensus        75 -~~~d~Vih~A~~~~~------~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~  143 (337)
T 1r6d_A           75 -RGVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESS  143 (337)
T ss_dssp             -TTCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             -cCCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCCC
Confidence             489999999986431      1234567889999999999999999875    346999999976532           


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc-------cC
Q 023553          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------NM  233 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~  233 (280)
                      +..+...|+.+|++.+.+++.++.++   |++++.+.|+.+.++...........       .........       ..
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~  213 (337)
T 1r6d_A          144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLF-------VTNLLDGGTLPLYGDGAN  213 (337)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHH-------HHHHHTTCCEEEETTSCC
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHH-------HHHHhcCCCcEEeCCCCe
Confidence            22346789999999999999998885   79999999999999874321000000       111111110       01


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       234 ~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++++|+|++++.++...   .+|++++++||..
T Consensus       214 ~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~  247 (337)
T 1r6d_A          214 VREWVHTDDHCRGIALVLAGG---RAGEIYHIGGGLE  247 (337)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCE
T ss_pred             eEeeEeHHHHHHHHHHHHhCC---CCCCEEEeCCCCC
Confidence            136788999999999998643   3689999999863

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.90  E-value=3.4e-23  Score=187.63  Aligned_cols=226  Identities=14%  Similarity=0.059  Sum_probs=159.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch---HHHHHHHhC----------CCCCeEEEecCCCCHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL---GQQVCQSLG----------GEPDTFFCHCDVTKEEDV   81 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~---~~~~~~~~~----------~~~~~~~~~~D~~~~~~~   81 (280)
                      ...+|+||||||+|+||++++++|++.|++|++++|+.+.   .+.+.+.+.          ...++.++.+|+++++++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            3567899999999999999999999999999999998772   222222111          125788999999998876


Q ss_pred             HHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc--c
Q 023553           82 CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG--A  159 (280)
Q Consensus        82 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~--~  159 (280)
                      .        .++++|+|||+||....         .+++++.+++|+.+..++++++.+     +..+||++||..+  .
T Consensus       146 ~--------~~~~~d~Vih~A~~~~~---------~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~  203 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTY  203 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSE
T ss_pred             C--------CcCCCCEEEECCcccCC---------CCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhCCC
Confidence            5        45799999999997532         256788999999999999999987     3479999999887  0


Q ss_pred             ----------------ccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhh
Q 023553          160 ----------------IGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF  223 (280)
Q Consensus       160 ----------------~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~  223 (280)
                                      .+......|+.+|++.+.+++.++.    .|++++.+.||.+.++............ .....+
T Consensus       204 ~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~-~~~~~~  278 (427)
T 4f6c_A          204 FDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKT-NRFSMV  278 (427)
T ss_dssp             ECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGG-CHHHHH
T ss_pred             ccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcch-HHHHHH
Confidence                            0122567999999999999998754    5899999999999998765432211000 000001


Q ss_pred             HHHHhhhc-------cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          224 RNFVARNA-------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       224 ~~~~~~~~-------~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .....+..       .....+++++|+|+++++++....   .|+++++++|..
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~  329 (427)
T 4f6c_A          279 MNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNK  329 (427)
T ss_dssp             HHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCC
T ss_pred             HHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCC
Confidence            11111100       112468899999999999997543   899999998754

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.90  E-value=5.7e-24  Score=184.56  Aligned_cols=217  Identities=17%  Similarity=0.062  Sum_probs=160.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      +++|||||+|+||+++++.|+++|++|++++|+.+......     ...+.++.+|+++.+ +.+.++       . |++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~d~~-~~~~~~-------~-d~v   66 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKDYS-WGAGIK-------G-DVV   66 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----CTTSEEECCCTTSTT-TTTTCC-------C-SEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----CCCceEEECccccHH-HHhhcC-------C-CEE
Confidence            47999999999999999999999999999999876433221     246778899999987 544333       3 999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCcc
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHA  167 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-----------~~~~~~  167 (280)
                      ||+||....      ..+.++++..+++|+.++.++++++...    +.++||++||.+....           ..+...
T Consensus        67 ih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~  136 (312)
T 3ko8_A           67 FHFAANPEV------RLSTTEPIVHFNENVVATFNVLEWARQT----GVRTVVFASSSTVYGDADVIPTPEEEPYKPISV  136 (312)
T ss_dssp             EECCSSCSS------SGGGSCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EECCCCCCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence            999995422      3455678899999999999999998653    3569999999776532           234578


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc--------cCCCCCCC
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA--------NMQGTELT  239 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~  239 (280)
                      |+.+|++.+.+++.++.++   |++++.+.||.+.++........        .....+.....        .....++.
T Consensus       137 Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~~~i~  205 (312)
T 3ko8_A          137 YGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIY--------DFIMKLRRNPNVLEVLGDGTQRKSYLY  205 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHH--------HHHHHHHHCTTEEEEC----CEECEEE
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHH--------HHHHHHHhCCCCeEEcCCCCeEEeeEE
Confidence            9999999999999999986   79999999999999874421100        00111111100        01235788


Q ss_pred             HHHHHHHHHHhcCC-CCCceeecEEEeCCCcc
Q 023553          240 ANDVANAVLFLASD-EARYISGTNLMVDGGFT  270 (280)
Q Consensus       240 ~~dva~~i~~l~s~-~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+|++++.++.. ......|+++++.+|..
T Consensus       206 v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~  237 (312)
T 3ko8_A          206 VRDAVEATLAAWKKFEEMDAPFLALNVGNVDA  237 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCSEEEEEESCSSC
T ss_pred             HHHHHHHHHHHHHhccccCCCCcEEEEcCCCc
Confidence            99999999999864 11345789999998754

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.90  E-value=1.6e-23  Score=221.53  Aligned_cols=177  Identities=14%  Similarity=0.129  Sum_probs=139.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchH---HHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLG---QQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~---~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+|++|||||++|||+++|++|+++|++ |++++|+....   ++..+++. ...++.++.||+++.+++.++++++. .
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            7999999999999999999999999997 88889986543   23333332 23578889999999999999999987 4


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++||++|||||+...  ..+.+.+.++|++++++|+.|++++.+.+.+.|.+  .|+||++||.++..+.+++..|+++
T Consensus      1962 ~g~id~lVnnAgv~~~--~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~--~g~iV~iSS~ag~~g~~g~~~Y~aa 2037 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRD--AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE--LDYFVIFSSVSCGRGNAGQANYGFA 2037 (2512)
T ss_dssp             HSCEEEEEECCCC------------------CTTTTHHHHHHHHHHHHHHCTT--CCEEEEECCHHHHTTCTTCHHHHHH
T ss_pred             cCCCcEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCEEEEecchhhcCCCCCcHHHHHH
Confidence            7999999999999765  78899999999999999999999999999998854  3899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCcee
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVA  202 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~  202 (280)
                      |+++++|++..+.+    |+...++..|.+.
T Consensus      2038 Kaal~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2038 NSAMERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHC----CCcEEEEEccCcC
Confidence            99999999987665    6777778777653

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.90  E-value=1.3e-22  Score=180.97  Aligned_cols=226  Identities=15%  Similarity=0.005  Sum_probs=163.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++.+++++|||||+|+||+++++.|+++|++|++++|+........     ...+.++.+|+++.+++.++++       
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~v~~~~~Dl~d~~~~~~~~~-------   92 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----MFCDEFHLVDLRVMENCLKVTE-------   92 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----GTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-----cCCceEEECCCCCHHHHHHHhC-------
Confidence            3446789999999999999999999999999999999865432111     1357788999999998877664       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-------------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-------------  160 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-------------  160 (280)
                      ++|+|||+||....  ..   ...+++++.+++|+.++.++++++..    .+.++||++||.....             
T Consensus        93 ~~d~Vih~A~~~~~--~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~~~~  163 (379)
T 2c5a_A           93 GVDHVFNLAADMGG--MG---FIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLK  163 (379)
T ss_dssp             TCSEEEECCCCCCC--HH---HHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred             CCCEEEECceecCc--cc---ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCCCcC
Confidence            89999999997532  11   11345788999999999999999865    3346999999976543             


Q ss_pred             -----cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc----
Q 023553          161 -----GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA----  231 (280)
Q Consensus       161 -----~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  231 (280)
                           +..+...|+.+|++.+.+++.++.++   |++++.+.||.+.++..............   ..........    
T Consensus       164 E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  237 (379)
T 2c5a_A          164 ESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAA---FCRKAQTSTDRFEM  237 (379)
T ss_dssp             GGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHH---HHHHHHHCSSCEEE
T ss_pred             cccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHH---HHHHHHhCCCceEE
Confidence                 22345689999999999999998875   79999999999999864322110000000   0111111110    


Q ss_pred             ----cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          232 ----NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 ----~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                          .....+++++|+|++++.++...    .|+.+++.+|..
T Consensus       238 ~g~g~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~  276 (379)
T 2c5a_A          238 WGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM  276 (379)
T ss_dssp             ESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCC
T ss_pred             eCCCCeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCc
Confidence                01246788999999999999653    467888888753

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.90  E-value=3.1e-23  Score=180.18  Aligned_cols=214  Identities=12%  Similarity=0.075  Sum_probs=155.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      |++|||||+|+||+++++.|+++|+.|++..++....+.    .  ...+.++.+|+++ +++.++++       ++|++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~----~--~~~~~~~~~Dl~~-~~~~~~~~-------~~d~v   67 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF----V--NEAARLVKADLAA-DDIKDYLK-------GAEEV   67 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG----S--CTTEEEECCCTTT-SCCHHHHT-------TCSEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh----c--CCCcEEEECcCCh-HHHHHHhc-------CCCEE
Confidence            579999999999999999999999555554444433221    1  2457889999998 77766554       89999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-----------cCCCCcc
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------GGLGPHA  167 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-----------~~~~~~~  167 (280)
                      ||+|+....      ..+.+++++.+++|+.++.++++++..    .+.++||++||.+...           +..+...
T Consensus        68 ih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~  137 (313)
T 3ehe_A           68 WHIAANPDV------RIGAENPDEIYRNNVLATYRLLEAMRK----AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL  137 (313)
T ss_dssp             EECCCCCCC------C-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EECCCCCCh------hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence            999985422      345567889999999999999988655    3457999999977652           3334678


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh--------hccCCCCCCC
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR--------NANMQGTELT  239 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~  239 (280)
                      |+.+|++.+.+++.++.++   |++++.+.|+.+.++.......     .   .....+...        .......++.
T Consensus       138 Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~g~~~~~~i~  206 (313)
T 3ehe_A          138 YGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVI-----Y---DFIMKLKRNPEELEILGNGEQNKSYIY  206 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHH-----H---HHHHHHHHCTTEEEESTTSCCEECCEE
T ss_pred             HHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChH-----H---HHHHHHHcCCCceEEeCCCCeEEeEEE
Confidence            9999999999999999885   7999999999999886432100     0   001111111        0011246889


Q ss_pred             HHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          240 ANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       240 ~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+|+++++++..   ...|+++++.+|..
T Consensus       207 v~Dva~a~~~~~~~---~~~~~~~ni~~~~~  234 (313)
T 3ehe_A          207 ISDCVDAMLFGLRG---DERVNIFNIGSEDQ  234 (313)
T ss_dssp             HHHHHHHHHHHTTC---CSSEEEEECCCSCC
T ss_pred             HHHHHHHHHHHhcc---CCCCceEEECCCCC
Confidence            99999999999972   34689999998854

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.90  E-value=2.9e-22  Score=179.85  Aligned_cols=235  Identities=14%  Similarity=0.015  Sum_probs=161.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH-----------------HHHHHhC-CCCCeEEEecCCCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-----------------QVCQSLG-GEPDTFFCHCDVTK   77 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~-----------------~~~~~~~-~~~~~~~~~~D~~~   77 (280)
                      ..+.++|||||+|.||+++++.|+++|++|++++|......                 ...+... ....+.++.+|+++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            57889999999999999999999999999999988643211                 1111000 12457788999999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           78 EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        78 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      .+++.++++..     ++|+|||+||....   .....+++++...+++|+.++.++++++.+.-   ...+||++||.+
T Consensus        89 ~~~~~~~~~~~-----~~D~Vih~A~~~~~---~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~~~~~V~~SS~~  157 (404)
T 1i24_A           89 FEFLAESFKSF-----EPDSVVHFGEQRSA---PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG---EECHLVKLGTMG  157 (404)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCCH---HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC---TTCEEEEECCGG
T ss_pred             HHHHHHHHhcc-----CCCEEEECCCCCCc---cchhhCccchhhhHHHHHHHHHHHHHHHHHhC---CCcEEEEeCcHH
Confidence            99988887754     79999999997532   11223667788899999999999999987742   124999999976


Q ss_pred             ccc------------------------cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCC---
Q 023553          158 GAI------------------------GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHL---  210 (280)
Q Consensus       158 ~~~------------------------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~---  210 (280)
                      ...                        +..+...|+.||++.+.+++.++.++   |++++.+.||.+.++......   
T Consensus       158 vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~~~  234 (404)
T 1i24_A          158 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHE  234 (404)
T ss_dssp             GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSG
T ss_pred             HhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCcccccc
Confidence            532                        22335689999999999999998886   799999999999998643210   


Q ss_pred             -------CcchhhhhhhhhhH-HHHhhhcc-------CCCCCCCHHHHHHHHHHhcCCCCCceee--cEEEeCC
Q 023553          211 -------PEEERTEDAMVGFR-NFVARNAN-------MQGTELTANDVANAVLFLASDEARYISG--TNLMVDG  267 (280)
Q Consensus       211 -------~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~dva~~i~~l~s~~~~~~~G--~~i~~dg  267 (280)
                             +.... ......+. ........       ....+++++|+|++++.++....  ..|  +++++.+
T Consensus       235 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          235 ELRNRLDYDAVF-GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             GGCCCCCCSTTT-CCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             ccccccccccch-hhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence                   00000 00001111 11111110       12357889999999999986432  235  6888865

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.90  E-value=5.6e-23  Score=178.99  Aligned_cols=220  Identities=17%  Similarity=0.125  Sum_probs=148.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-Ccch---HHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNL---GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~---~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ||++|||||+|+||+++++.|+++|++|+++.| +.+.   .... ..+.. ...+.++.+|++|++++.++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            689999999999999999999999999999888 5422   2211 11111 1246778899999988776665      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHH-HHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC-------
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSE-FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-------  164 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~-------  164 (280)
                       ++|+|||+|+.. .       .+.++ +++.+++|+.++.++++++.+..   +.++||++||.++..+.+.       
T Consensus        74 -~~d~vih~A~~~-~-------~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~e  141 (322)
T 2p4h_X           74 -GCVGIFHTASPI-D-------FAVSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDKDVLDE  141 (322)
T ss_dssp             -TCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCCSEECT
T ss_pred             -CCCEEEEcCCcc-c-------CCCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCCeecCC
Confidence             789999999632 1       12222 45689999999999999987641   3479999999875433211       


Q ss_pred             --------------C-ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh
Q 023553          165 --------------P-HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR  229 (280)
Q Consensus       165 --------------~-~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (280)
                                    . ..|+.||++.+.+++.++.+   +|++++.+.|+.+.+++.....+...      .........
T Consensus       142 ~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~------~~~~~~~~g  212 (322)
T 2p4h_X          142 SDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSI------EKALVLVLG  212 (322)
T ss_dssp             TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHH------HHHTHHHHS
T ss_pred             ccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchH------HHHHHHHhC
Confidence                          1 16999999888887776654   58999999999999997543322110      000001111


Q ss_pred             hccCCC----CCCCHHHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          230 NANMQG----TELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       230 ~~~~~~----~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      .....+    .+++++|+|++++++++..  ..+|+ +.+.++
T Consensus       213 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~g~-~~~~~~  252 (322)
T 2p4h_X          213 KKEQIGVTRFHMVHVDDVARAHIYLLENS--VPGGR-YNCSPF  252 (322)
T ss_dssp             CGGGCCEEEEEEEEHHHHHHHHHHHHHSC--CCCEE-EECCCE
T ss_pred             CCccCcCCCcCEEEHHHHHHHHHHHhhCc--CCCCC-EEEcCC
Confidence            000011    4889999999999999643  25676 445443

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.89  E-value=7.1e-23  Score=169.73  Aligned_cols=209  Identities=10%  Similarity=0.013  Sum_probs=156.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .++++||||+|+||+++++.|+++|++|++++|+.+.....      ...+.++.+|++|++++.++++       ++|+
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   70 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE------NEHLKVKKADVSSLDEVCEVCK-------GADA   70 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC------CTTEEEECCCTTCHHHHHHHHT-------TCSE
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc------cCceEEEEecCCCHHHHHHHhc-------CCCE
Confidence            37899999999999999999999999999999997754321      2578899999999999877765       7999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC----------CCcc
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----------GPHA  167 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~----------~~~~  167 (280)
                      +||+||....            ..+.+++|+.+..++++++..    .+..+||++||..+..+.+          +...
T Consensus        71 vi~~a~~~~~------------~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~  134 (227)
T 3dhn_A           71 VISAFNPGWN------------NPDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENI  134 (227)
T ss_dssp             EEECCCC------------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCGGG
T ss_pred             EEEeCcCCCC------------ChhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchHHH
Confidence            9999986422            113788999999988888765    3446999999987765433          3578


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |+.+|++.+.+.+.++.   ..|++++.+.||.+.++............       ..+.   ......+++++|+|+++
T Consensus       135 Y~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~-------~~~~---~~~~~~~i~~~Dva~ai  201 (227)
T 3dhn_A          135 LPGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYRLGKD-------DMIV---DIVGNSHISVEDYAAAM  201 (227)
T ss_dssp             HHHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCEEESS-------BCCC---CTTSCCEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCccccceeecCC-------Cccc---CCCCCcEEeHHHHHHHH
Confidence            99999999999888765   36899999999999887643221110000       0000   00014578999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCcc
Q 023553          248 LFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +.++..+  ...|+++.+.+.-.
T Consensus       202 ~~~l~~~--~~~g~~~~~~~~~~  222 (227)
T 3dhn_A          202 IDELEHP--KHHQERFTIGYLEH  222 (227)
T ss_dssp             HHHHHSC--CCCSEEEEEECCSC
T ss_pred             HHHHhCc--cccCcEEEEEeehh
Confidence            9999653  46899998877543

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.89  E-value=3.3e-22  Score=176.06  Aligned_cols=233  Identities=13%  Similarity=0.102  Sum_probs=161.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch----------HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL----------GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~----------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      +|++|||||+|+||+++++.|+++|++|++++|+...          .+.+.+..  ...+.++.+|+++.+++.++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc--CCceEEEECCCCCHHHHHHHHHh
Confidence            5899999999999999999999999999999875432          22221111  23577889999999998777764


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc------
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------  161 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~------  161 (280)
                      .     ++|+|||+||....  .    .+.+++++.+++|+.++.++++++..    .+.++||++||.+....      
T Consensus        80 ~-----~~d~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~  144 (348)
T 1ek6_A           80 Y-----SFMAVIHFAGLKAV--G----ESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPL  144 (348)
T ss_dssp             C-----CEEEEEECCSCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSB
T ss_pred             c-----CCCEEEECCCCcCc--c----chhhchHHHHHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCCCCCc
Confidence            2     89999999997532  1    13456788999999999999887654    34579999999776431      


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh--hhhhhhhhHHHHh-hhc-
Q 023553          162 ------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVA-RNA-  231 (280)
Q Consensus       162 ------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~-  231 (280)
                            .+....|+.+|++.+.+++.++.+  ..++++..+.|+.+..+.....+.....  .......+..... +.. 
T Consensus       145 ~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~  222 (348)
T 1ek6_A          145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREA  222 (348)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSC
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCC
Confidence                  122678999999999999999888  3469999999999987742111110000  0000011111111 110 


Q ss_pred             -------------cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          232 -------------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       232 -------------~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                                   .....++.++|+|++++.++........++++++.+|.
T Consensus       223 ~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~  273 (348)
T 1ek6_A          223 LNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGT  273 (348)
T ss_dssp             EEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSC
T ss_pred             eEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCC
Confidence                         01136789999999999988542212234899998774

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.89  E-value=1.7e-22  Score=179.54  Aligned_cols=230  Identities=13%  Similarity=0.112  Sum_probs=164.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCC-CHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVT-KEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~   89 (280)
                      .+..++++++|||||+|+||+++++.|++. |++|++++|+.+......+    ...+.++.+|++ +.+++.++++   
T Consensus        18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----~~~v~~~~~Dl~~d~~~~~~~~~---   90 (372)
T 3slg_A           18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----HERMHFFEGDITINKEWVEYHVK---   90 (372)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----STTEEEEECCTTTCHHHHHHHHH---
T ss_pred             CCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----CCCeEEEeCccCCCHHHHHHHhc---
Confidence            344567899999999999999999999999 9999999998765443322    247889999999 9998877776   


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-------
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-------  162 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-------  162 (280)
                          ++|+|||+|+....      ....++..+.+++|+.+..++++++...    + .+||++||.+.....       
T Consensus        91 ----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~e  155 (372)
T 3slg_A           91 ----KCDVILPLVAIATP------ATYVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMCADEQFDP  155 (372)
T ss_dssp             ----HCSEEEECBCCCCH------HHHHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSCCCSSBCT
T ss_pred             ----cCCEEEEcCccccH------HHHhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCCCCCCCCc
Confidence                79999999997543      1223556788999999999999888664    3 799999996543321       


Q ss_pred             -----------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhH-HHHhhh
Q 023553          163 -----------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR-NFVARN  230 (280)
Q Consensus       163 -----------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~  230 (280)
                                 .+...|+.+|.+.+.+++.++.+    |+++..+.|+.+.++..................+. .+....
T Consensus       156 ~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (372)
T 3slg_A          156 DASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGE  231 (372)
T ss_dssp             TTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTC
T ss_pred             cccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCC
Confidence                       12337999999999999988765    79999999999998875432211000000111111 111111


Q ss_pred             c-------cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCC
Q 023553          231 A-------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       231 ~-------~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dg  267 (280)
                      .       .....++.++|+|++++.++........|+++++.+
T Consensus       232 ~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~  275 (372)
T 3slg_A          232 NISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGN  275 (372)
T ss_dssp             CEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred             CcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCC
Confidence            1       111367899999999999997654346789999998

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.89  E-value=3e-22  Score=175.17  Aligned_cols=240  Identities=10%  Similarity=-0.029  Sum_probs=171.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHH-HcCCeEEEEecCcchH------------HHHHHHhCC-CCCeEEEecCCCCHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFH-KHGAKVCIADVQDNLG------------QQVCQSLGG-EPDTFFCHCDVTKEED   80 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~-~~g~~Vi~~~r~~~~~------------~~~~~~~~~-~~~~~~~~~D~~~~~~   80 (280)
                      .+.+|++||||||+|||++++..|+ ..|+.|+++++..+..            ....+.+.. ......+.||++++++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            4678999999999999999999999 6899999998765422            122222222 3578899999999999


Q ss_pred             HHHHHHHHHHHhCCccEEEECCCCCCCCC-----------CC---------------------CCCCCHH---HHHHHhh
Q 023553           81 VCSAVDLTVEKFGTLDIMVNNAGISGAPC-----------PD---------------------IREADLS---EFEKVFD  125 (280)
Q Consensus        81 ~~~~~~~~~~~~g~id~li~~ag~~~~~~-----------~~---------------------~~~~~~~---~~~~~~~  125 (280)
                      +.++++++++.+|+||+||||++......           ++                     +...+.+   .+...|.
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            99999999999999999999999763200           01                     1122333   4555666


Q ss_pred             hhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC--CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceec
Q 023553          126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL--GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT  203 (280)
Q Consensus       126 ~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~--~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t  203 (280)
                      ...+..+...+...+.|  ..+++++.+|+.......|  ..+.++++|++|++.++.|+.++++  ++++++.||.+.|
T Consensus       207 ~s~~s~w~~al~~a~ll--a~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~vT  282 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLL--EEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLVT  282 (401)
T ss_dssp             SHHHHHHHHHHHHTTCE--EEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCCC
T ss_pred             hhHHHHHHHHHHhhhcc--cCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCcccc
Confidence            67777777777777777  3468999999987765444  4468999999999999999999975  8999999999999


Q ss_pred             cccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          204 GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .-....+... ...       ..+.+..   ...+..|.+.+.+..|..+ .-|-++..+.+|+...
T Consensus       283 ~AssaIP~~p-ly~-------~~l~kvm---k~~g~heg~ieq~~rl~~~-~ly~~~~~~~~D~~~r  337 (401)
T 4ggo_A          283 RASAVIPVIP-LYL-------ASLFKVM---KEKGNHEGCIEQITRLYAE-RLYRKDGTIPVDEENR  337 (401)
T ss_dssp             TTGGGSSSHH-HHH-------HHHHHHH---HHHTCCCCHHHHHHHHHHH-TTSCTTCCCCCCTTSC
T ss_pred             chhhcCCCch-HHH-------HHHHHHH---HhcCCCCchHHHHHHHHHH-hhccCCCCCCcCCCCC
Confidence            9776654322 111       1111110   2334567888888888854 2243444455676433

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.89  E-value=1.3e-21  Score=175.40  Aligned_cols=172  Identities=21%  Similarity=0.196  Sum_probs=135.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHH-HcCCeEEEEecCcch---------HHHH---HHHhCC---CCC---eEEEecCCCCH
Q 023553           18 GRVALITGGATGIGESTVRLFH-KHGAKVCIADVQDNL---------GQQV---CQSLGG---EPD---TFFCHCDVTKE   78 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~-~~g~~Vi~~~r~~~~---------~~~~---~~~~~~---~~~---~~~~~~D~~~~   78 (280)
                      ++++|||||+|+||+++++.|+ ++|++|++++|+...         .+.+   .+.+..   ...   +.++.+|++++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 999999999987543         2322   223321   123   78899999999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        79 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      +++.+++++    ++++|+|||+||....  .    .+.+++++.+++|+.++.++++++..    .+.++||++||.+.
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~--~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~iv~~SS~~v  147 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAV--G----ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAI  147 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCc--C----cchhhHHHHHHHHhHHHHHHHHHHHH----hCCCEEEEECCHHH
Confidence            998776653    4569999999997532  1    14466889999999999999998754    34579999999665


Q ss_pred             cccCC------------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceecccc
Q 023553          159 AIGGL------------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA  206 (280)
Q Consensus       159 ~~~~~------------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~  206 (280)
                      .....                  +...|+.+|++.+.+++.++.++   |++++.+.|+.+..+..
T Consensus       148 ~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~~  210 (397)
T 1gy8_A          148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHE  210 (397)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCT
T ss_pred             hCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCCc
Confidence            42211                  25789999999999999999986   79999999999988853

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.89  E-value=1.1e-21  Score=172.26  Aligned_cols=226  Identities=13%  Similarity=0.068  Sum_probs=159.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH-HHHHHHHHHHHHHhCCcc
Q 023553           19 RVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE-EDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   96 (280)
                      +++|||||+|+||+++++.|+++ |++|++++|+.+..+..    .....+.++.+|+++. +.+.++++       ++|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~-------~~d   69 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----LNHPHFHFVEGDISIHSEWIEYHVK-------KCD   69 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG----TTCTTEEEEECCTTTCSHHHHHHHH-------HCS
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh----hcCCCeEEEeccccCcHHHHHhhcc-------CCC
Confidence            47999999999999999999998 89999999987654322    1234678899999984 55555554       689


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC-------------
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-------------  163 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~-------------  163 (280)
                      +|||+||....  .    ...+++.+.+++|+.+..++++++.+    .+ .+||++||.+......             
T Consensus        70 ~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~  138 (345)
T 2bll_A           70 VVLPLVAIATP--I----EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV  138 (345)
T ss_dssp             EEEECBCCCCH--H----HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred             EEEEcccccCc--c----chhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCccccccc
Confidence            99999997532  1    12345778999999999999888865    33 7999999976543211             


Q ss_pred             -----CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhh-HHHHhhhc------
Q 023553          164 -----GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVARNA------  231 (280)
Q Consensus       164 -----~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------  231 (280)
                           ....|+.+|++.+.+++.++.++   |++++.+.|+.+.++..................+ ........      
T Consensus       139 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (345)
T 2bll_A          139 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  215 (345)
T ss_dssp             CCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGG
T ss_pred             CcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECC
Confidence                 12279999999999999998875   7999999999999886532110000000000001 11111111      


Q ss_pred             -cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          232 -NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       232 -~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                       .....+++++|+|++++.++........|+++++.+|.
T Consensus       216 g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          216 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             CCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence             01135889999999999999754334678999999873

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=1.9e-21  Score=172.62  Aligned_cols=228  Identities=12%  Similarity=0.066  Sum_probs=155.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH-HHHHHhC-----CCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-QVCQSLG-----GEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~-~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +|+++||||+|+||+++++.|+++|++|++++|+.+... +..+.+.     ....+.++.+|+++.+++.++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            478999999999999999999999999999999865321 1111111     1246788899999999998888755   


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC---------
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG---------  162 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~---------  162 (280)
                        ++|++||+||....      ..+.+++.+.+++|+.++.++++++.+...+ +.++||++||.+.....         
T Consensus        78 --~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~  148 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV------AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETT  148 (372)
T ss_dssp             --CCSEEEECCCCCTT------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             --CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccC
Confidence              79999999997532      2344567889999999999999999887543 34799999997654321         


Q ss_pred             --CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhh-hHHHHhhhc--------
Q 023553          163 --LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG-FRNFVARNA--------  231 (280)
Q Consensus       163 --~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------  231 (280)
                        .+...|+.+|++.+.+++.++.++   ++.+..+.|..+..+........     ..... .........        
T Consensus       149 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~g~~  220 (372)
T 1db3_A          149 PFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVT-----RKITRAIANIAQGLESCLYLGNM  220 (372)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHH-----HHHHHHHHHHHTTSCCCEEESCT
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchh-----hHHHHHHHHHHcCCCCceeecCC
Confidence              235789999999999999999885   56666677766655543221100     00000 111111110        


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       232 ~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      .....+++++|+|++++.++....    ++.+++.+|.
T Consensus       221 ~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~  254 (372)
T 1db3_A          221 DSLRDWGHAKDYVKMQWMMLQQEQ----PEDFVIATGV  254 (372)
T ss_dssp             TCEECCEEHHHHHHHHHHTTSSSS----CCCEEECCCC
T ss_pred             CceeeeeEHHHHHHHHHHHHhcCC----CceEEEcCCC
Confidence            111368899999999999986432    4677776664

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.88  E-value=2.2e-22  Score=171.07  Aligned_cols=192  Identities=17%  Similarity=0.123  Sum_probs=148.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +|++|||||+|+||+++++.|+++|++|++++|+.....        ...+.++.+|+++++++.++++       ++|+
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   66 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--------EAHEEIVACDLADAQAVHDLVK-------DCDG   66 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--------CTTEEECCCCTTCHHHHHHHHT-------TCSE
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--------CCCccEEEccCCCHHHHHHHHc-------CCCE
Confidence            378999999999999999999999999999999875321        1246788999999988877665       7999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC------------CC
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL------------GP  165 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~------------~~  165 (280)
                      |||+||...          .+++++.+++|+.++.++++++.+    .+.++||++||..+....+            +.
T Consensus        67 vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~  132 (267)
T 3ay3_A           67 IIHLGGVSV----------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPD  132 (267)
T ss_dssp             EEECCSCCS----------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCC
T ss_pred             EEECCcCCC----------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCC
Confidence            999999752          134678999999999999999875    3457999999987654332            34


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCcee-ccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ..|+.+|++++.+++.++.+   +|++++.+.||.+. ++.       ...         .        ...+++++|+|
T Consensus       133 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~-------~~~---------~--------~~~~~~~~dva  185 (267)
T 3ay3_A          133 SLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPK-------DAR---------M--------MATWLSVDDFM  185 (267)
T ss_dssp             SHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCC-------SHH---------H--------HHHBCCHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCC-------CCC---------e--------eeccccHHHHH
Confidence            78999999999999988653   68999999999984 321       000         0        03467999999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCC
Q 023553          245 NAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dg  267 (280)
                      ++++.++....  ..+..+.+.+
T Consensus       186 ~~~~~~~~~~~--~~~~~~~~~~  206 (267)
T 3ay3_A          186 RLMKRAFVAPK--LGCTVVYGAS  206 (267)
T ss_dssp             HHHHHHHHSSC--CCEEEEEECC
T ss_pred             HHHHHHHhCCC--CCceeEecCC
Confidence            99999986542  2234455443

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=1.5e-21  Score=173.66  Aligned_cols=228  Identities=11%  Similarity=0.018  Sum_probs=159.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-----HHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-----GQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |++|||||+|+||+++++.|+++|++|++++|+.+.     ++.+.+...  ....+.++.+|+++.+++.++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            789999999999999999999999999999998643     211111110  1236778899999999998887755   


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc----------
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------  161 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~----------  161 (280)
                        ++|+|||+||....      ..+.+++++.+++|+.++.++++++.+... ++.++||++||.+....          
T Consensus       102 --~~d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E~~  172 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETT  172 (375)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             --CCCEEEECCCcccc------cccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCccC
Confidence              79999999996432      123467889999999999999999988654 22379999999876542          


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc--------
Q 023553          162 -GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN--------  232 (280)
Q Consensus       162 -~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  232 (280)
                       ..+...|+.+|++.+.+++.++.++   ++.+..+.|+.+..+........... .   ............        
T Consensus       173 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~-~---~~~~~~~~g~~~~~~~g~~~  245 (375)
T 1t2a_A          173 PFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKI-S---RSVAKIYLGQLECFSLGNLD  245 (375)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHH-H---HHHHHHHHTSCSCEEESCTT
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHH-H---HHHHHHHcCCCceeEeCCCC
Confidence             1245689999999999999998875   67888888887776643221110000 0   001111111111        


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       233 ~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ....++.++|+|++++.++....    ++.+++.+|.
T Consensus       246 ~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~  278 (375)
T 1t2a_A          246 AKRDWGHAKDYVEAMWLMLQNDE----PEDFVIATGE  278 (375)
T ss_dssp             CEECCEEHHHHHHHHHHHHHSSS----CCCEEECCSC
T ss_pred             ceeeeEEHHHHHHHHHHHHhcCC----CceEEEeCCC
Confidence            11357899999999999986432    3567776654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.88  E-value=2.8e-21  Score=169.17  Aligned_cols=229  Identities=15%  Similarity=0.055  Sum_probs=159.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH-HHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ..++++|||||+|+||+++++.|+++|++|++++|+.+... ...+.+.....+.++.+|+++.+++.++++..     +
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   86 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----Q   86 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----C
Confidence            35889999999999999999999999999999999865421 11222222346788899999999998887754     7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC-----------
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-----------  163 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~-----------  163 (280)
                      +|+|||+||....      ..+.+++.+.+++|+.++.++++++.+.   ...++||++||.+...+..           
T Consensus        87 ~d~Vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~  157 (335)
T 1rpn_A           87 PQEVYNLAAQSFV------GASWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSEMFGLIQAERQDENTPFY  157 (335)
T ss_dssp             CSEEEECCSCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CCEEEECccccch------hhhhhChHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEeCHHHhCCCCCCCCCcccCCC
Confidence            9999999996431      1123457889999999999999998764   1137999999976643321           


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc--------CCC
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN--------MQG  235 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~  235 (280)
                      +...|+.+|++.+.+++.++.++   ++.+..+.|+.+..+......... ...   ............        ...
T Consensus       158 p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~-~~~---~~~~~~~~g~~~~~~~g~g~~~~  230 (335)
T 1rpn_A          158 PRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTR-KVT---DAVARIKLGKQQELRLGNVDAKR  230 (335)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHH-HHH---HHHHHHHTTSCSCEEESCTTCEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchH-HHH---HHHHHHHcCCCceEEeCCCccee
Confidence            24589999999999999998875   678888999988877543221100 000   001111111101        113


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          236 TELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       236 ~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      .++.++|+|++++.++....    ++.+++.+|.
T Consensus       231 ~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~  260 (335)
T 1rpn_A          231 DWGFAGDYVEAMWLMLQQDK----ADDYVVATGV  260 (335)
T ss_dssp             ECEEHHHHHHHHHHHHHSSS----CCCEEECCSC
T ss_pred             ceEEHHHHHHHHHHHHhcCC----CCEEEEeCCC
Confidence            57889999999999986532    3677777764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.88  E-value=9.8e-23  Score=180.25  Aligned_cols=225  Identities=15%  Similarity=0.119  Sum_probs=156.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++++++|||||+|+||+++++.|++.| +.|++++|+.....  .+.+.   .+. +.+|+++.+.+.++++.  ..+
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~---~~~-~~~d~~~~~~~~~~~~~--~~~  113 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV---DLN-IADYMDKEDFLIQIMAG--EEF  113 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT---TSC-CSEEEEHHHHHHHHHTT--CCC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc---Cce-EeeecCcHHHHHHHHhh--ccc
Confidence            45678999999999999999999999999 99999998765421  11111   122 66899998887766652  124


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC---------
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL---------  163 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~---------  163 (280)
                      +++|+|||+||....        +.+++++.+++|+.++.++++++.+.    +. +||++||.+.....+         
T Consensus       114 ~~~d~Vih~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~~~~~~E~~~  180 (357)
T 2x6t_A          114 GDVEAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREY  180 (357)
T ss_dssp             SSCCEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCSSCCCSSGGG
T ss_pred             CCCCEEEECCcccCC--------ccCCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCCCCCcCCcCC
Confidence            589999999997532        23457889999999999999999873    33 999999987654322         


Q ss_pred             --CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHH-HHhhhc-------cC
Q 023553          164 --GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRN-FVARNA-------NM  233 (280)
Q Consensus       164 --~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~  233 (280)
                        +...|+.+|++.+.+++.++.+   .|++++.+.|+.+.++...........    ...+.. ......       ..
T Consensus       181 ~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  253 (357)
T 2x6t_A          181 EKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASV----AFHLNTQLNNGESPKLFEGSEN  253 (357)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCH----HHHHHHHHHTTCCCEEETTGGG
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchH----HHHHHHHHHcCCCcEEeCCCCc
Confidence              2568999999999999998766   479999999999998864311000000    000111 111100       01


Q ss_pred             -CCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          234 -QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       234 -~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                       ...+++++|+|+++++++....    |+++++++|..
T Consensus       254 ~~~~~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~  287 (357)
T 2x6t_A          254 FKRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRA  287 (357)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHCC----CEEEEESCSCC
T ss_pred             ceEccEEHHHHHHHHHHHHhcCC----CCeEEecCCCc
Confidence             2467899999999999996543    88999988753

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.88  E-value=2.2e-21  Score=173.03  Aligned_cols=229  Identities=13%  Similarity=0.016  Sum_probs=158.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-----HHHHHHHhCC-CC-CeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-----GQQVCQSLGG-EP-DTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |++|||||+|+||+++++.|+++|++|++++|+.+.     ++...+.... .. .+.++.+|+++.+++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            799999999999999999999999999999998653     2211111110 12 6778899999999988887755   


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccc----------
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAI----------  160 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~----------  160 (280)
                        ++|+|||+||....      ..+.++++..+++|+.++.++++++.+...++ +.++||++||.+...          
T Consensus       106 --~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~  177 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETT  177 (381)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTS
T ss_pred             --CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCC
Confidence              79999999997532      13356788999999999999999999976432 346999999987543          


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc--------c
Q 023553          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA--------N  232 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~  232 (280)
                      +..+...|+.+|++.+.+++.++.++   ++.+..+.|..+..+......... ...   ...........        .
T Consensus       178 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~-~~~---~~~~~~~~g~~~~~~~g~~~  250 (381)
T 1n7h_A          178 PFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTR-KIT---RALGRIKVGLQTKLFLGNLQ  250 (381)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHH-HHH---HHHHHHHHTSCCCEEESCTT
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhH-HHH---HHHHHHHcCCCCeEEeCCCC
Confidence            22346789999999999999998885   455555555555444321111000 000   00011111100        1


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       233 ~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ....++.++|+|+++++++....    ++.+++.+|.
T Consensus       251 ~~~~~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~  283 (381)
T 1n7h_A          251 ASRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEE  283 (381)
T ss_dssp             CEEECEEHHHHHHHHHHHHTSSS----CCEEEECCSC
T ss_pred             ceeeeEEHHHHHHHHHHHHhCCC----CCeEEeeCCC
Confidence            12458899999999999997543    4788888875

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.87  E-value=2.7e-21  Score=159.75  Aligned_cols=199  Identities=10%  Similarity=0.023  Sum_probs=142.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +++||||+|+||+++++.|+++|++|++++|+.+....+.     ...+.++.+|++|+++         +.++++|+||
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~~~~~~~D~~d~~~---------~~~~~~d~vi   67 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-----GATVATLVKEPLVLTE---------ADLDSVDAVV   67 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-----CTTSEEEECCGGGCCH---------HHHTTCSEEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-----CCCceEEecccccccH---------hhcccCCEEE
Confidence            5999999999999999999999999999999987765432     1367889999999877         2345899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC--------------C
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG--------------P  165 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~--------------~  165 (280)
                      |+||....  ..           ...+|+.+.    +.+++.+++.+ +++|++||..+..+.+.              .
T Consensus        68 ~~ag~~~~--~~-----------~~~~n~~~~----~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
T 3h2s_A           68 DALSVPWG--SG-----------RGYLHLDFA----THLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQ  129 (224)
T ss_dssp             ECCCCCTT--SS-----------CTHHHHHHH----HHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS
T ss_pred             ECCccCCC--cc-----------hhhHHHHHH----HHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccc
Confidence            99998622  11           123455554    56667776666 99999999877665443              6


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHH
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|+.+|++.+.+ +   ......|++++.+.||++.++.....+....   .      .+  ........+++++|+|+
T Consensus       130 ~~y~~sK~~~e~~-~---~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~---~------~~--~~~~~~~~~i~~~DvA~  194 (224)
T 3h2s_A          130 PWYDGALYQYYEY-Q---FLQMNANVNWIGISPSEAFPSGPATSYVAGK---D------TL--LVGEDGQSHITTGNMAL  194 (224)
T ss_dssp             TTHHHHHHHHHHH-H---HHTTCTTSCEEEEEECSBCCCCCCCCEEEES---S------BC--CCCTTSCCBCCHHHHHH
T ss_pred             hhhHHHHHHHHHH-H---HHHhcCCCcEEEEcCccccCCCcccCceecc---c------cc--ccCCCCCceEeHHHHHH
Confidence            7899999998854 2   2234678999999999999873222100000   0      00  00011256899999999


Q ss_pred             HHHHhcCCCCCceeecEEEeCC
Q 023553          246 AVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~dg  267 (280)
                      +++.++...  ...|+++.+.|
T Consensus       195 ~~~~~l~~~--~~~g~~~~~~~  214 (224)
T 3h2s_A          195 AILDQLEHP--TAIRDRIVVRD  214 (224)
T ss_dssp             HHHHHHHSC--CCTTSEEEEEE
T ss_pred             HHHHHhcCc--cccCCEEEEec
Confidence            999999653  35688888754

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.87  E-value=2.2e-21  Score=168.34  Aligned_cols=209  Identities=16%  Similarity=0.100  Sum_probs=154.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +++++||||+|+||+++++.|+++|+.|++++|+..... + +      .+.++.+|++ .+++.++++       ++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-~------~~~~~~~Dl~-~~~~~~~~~-------~~d~   65 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-N------DYEYRVSDYT-LEDLINQLN-------DVDA   65 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------CCEEEECCCC-HHHHHHHTT-------TCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-C------ceEEEEcccc-HHHHHHhhc-------CCCE
Confidence            478999999999999999999999999999999944322 1 1      5778999999 888766654       8999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCc
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPH  166 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----------~~~~  166 (280)
                      |||+|+....  .        +..+.+++|+.+..++++++..    .+-.+||++||.......           .+..
T Consensus        66 Vih~a~~~~~--~--------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~  131 (311)
T 3m2p_A           66 VVHLAATRGS--Q--------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPLPDL  131 (311)
T ss_dssp             EEECCCCCCS--S--------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSS
T ss_pred             EEEccccCCC--C--------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCc
Confidence            9999997643  1        3456789999999999888865    344689999996654321           1346


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHh-hh-------ccCCCCCC
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA-RN-------ANMQGTEL  238 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~  238 (280)
                      .|+.+|.+.+.+++.++.+   .|+++..+.|+.+.++........        ..+..... ..       ......++
T Consensus       132 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~~g~~~~~~~~v  200 (311)
T 3m2p_A          132 MYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMI--------NRFFRQAFHGEQLTLHANSVAKREFL  200 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHH--------HHHHHHHHTCCCEEESSBCCCCEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHH--------HHHHHHHHcCCCeEEecCCCeEEceE
Confidence            8999999999999998886   589999999999998865422000        00111111 11       01123678


Q ss_pred             CHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          239 TANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       239 ~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .++|+|++++.++....   .|+++++.+|..
T Consensus       201 ~v~Dva~a~~~~~~~~~---~~~~~~i~~~~~  229 (311)
T 3m2p_A          201 YAKDAAKSVIYALKQEK---VSGTFNIGSGDA  229 (311)
T ss_dssp             EHHHHHHHHHHHTTCTT---CCEEEEECCSCE
T ss_pred             EHHHHHHHHHHHHhcCC---CCCeEEeCCCCc
Confidence            89999999999997543   789999988753

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.87  E-value=2.9e-21  Score=168.72  Aligned_cols=228  Identities=14%  Similarity=0.099  Sum_probs=160.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      ++++||||+|+||+++++.|+++|++|++++|+.....   +.+.  ..+.++.+|+++.+++.+++++     .++|+|
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~--~~~~~~~~D~~~~~~~~~~~~~-----~~~d~v   71 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAIT--EGAKFYNGDLRDKAFLRDVFTQ-----ENIEAV   71 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSC--TTSEEEECCTTCHHHHHHHHHH-----SCEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhcC--CCcEEEECCCCCHHHHHHHHhh-----cCCCEE
Confidence            68999999999999999999999999999998754322   1222  2577889999999998777664     489999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCcc
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPHA  167 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----------~~~~~  167 (280)
                      ||+||....      ..+.+++++.+++|+.++.++++++..    .+.++||++||.+.....           .+...
T Consensus        72 ih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~  141 (330)
T 2c20_A           72 MHFAADSLV------GVSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT  141 (330)
T ss_dssp             EECCCCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred             EECCcccCc------cccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence            999997532      123466889999999999999998754    345799999997654321           23578


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh-hhhhhhhhHHHHhhhcc--------------
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER-TEDAMVGFRNFVARNAN--------------  232 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------------  232 (280)
                      |+.+|++.+.+++.++.++   |++++.+.|+.+.++........... .......+.........              
T Consensus       142 Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  218 (330)
T 2c20_A          142 YGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG  218 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC
Confidence            9999999999999998764   89999999999998853211110000 00000111111111000              


Q ss_pred             -CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          233 -MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       233 -~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                       ....++.++|+|++++.++........|+++++.+|.
T Consensus       219 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~  256 (330)
T 2c20_A          219 TCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGN  256 (330)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTT
T ss_pred             ceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCC
Confidence             1125788999999999888532212246788887764

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.87  E-value=1.5e-22  Score=177.63  Aligned_cols=226  Identities=18%  Similarity=0.155  Sum_probs=148.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH---HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG---QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +|++|||||+|+||+++++.|+++|++|+++.|+.+..   ... ..+.....+.++.+|+++++++.++++       +
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   80 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHL-LELQELGDLKIFRADLTDELSFEAPIA-------G   80 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHH-HHHGGGSCEEEEECCTTTSSSSHHHHT-------T
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHH-HhcCCCCcEEEEecCCCChHHHHHHHc-------C
Confidence            78999999999999999999999999999988876532   111 112112357788999999887766654       7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHH-HHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSE-FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------  162 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----------  162 (280)
                      +|+|||+|+...     +   +.++ .++.+++|+.+..++++++.+..   +.++||++||.++..+.           
T Consensus        81 ~D~Vih~A~~~~-----~---~~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E  149 (338)
T 2rh8_A           81 CDFVFHVATPVH-----F---ASEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDE  149 (338)
T ss_dssp             CSEEEEESSCCC-----C------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCT
T ss_pred             CCEEEEeCCccC-----C---CCCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccCh
Confidence            899999998541     1   1122 34589999999999999988742   24699999998742210           


Q ss_pred             ----------C---CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh-hhhhhhHH-HH
Q 023553          163 ----------L---GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-DAMVGFRN-FV  227 (280)
Q Consensus       163 ----------~---~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~-~~  227 (280)
                                +   ....|+.||++.+.+++.++.+   +|++++.+.|+.+.++......+...... ....+... +.
T Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~  226 (338)
T 2rh8_A          150 KNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLIN  226 (338)
T ss_dssp             TTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHH
T ss_pred             hhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccc
Confidence                      0   0116999999999998887765   47999999999999997544322110000 00000000 00


Q ss_pred             --hhhc-cC-CCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          228 --ARNA-NM-QGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       228 --~~~~-~~-~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                        .+.. .. ...+++++|+|++++++++..  ...|.+ .+.++
T Consensus       227 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~-~~~~~  268 (338)
T 2rh8_A          227 GMKGMQMLSGSVSIAHVEDVCRAHIFVAEKE--SASGRY-ICCAA  268 (338)
T ss_dssp             HHHHHHHHHSSEEEEEHHHHHHHHHHHHHCT--TCCEEE-EECSE
T ss_pred             cccccccccCcccEEEHHHHHHHHHHHHcCC--CcCCcE-EEecC
Confidence              0000 00 015889999999999998643  235554 44333

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.87  E-value=7.8e-22  Score=171.37  Aligned_cols=213  Identities=13%  Similarity=0.038  Sum_probs=125.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +|++|||||+|+||+++++.|+++|++|++++|+.+.         .  .  ++.+|+++++++.++++..     ++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~--~--~~~~Dl~d~~~~~~~~~~~-----~~d~   63 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR---------P--K--FEQVNLLDSNAVHHIIHDF-----QPHV   63 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------CHHHHHHH-----CCSE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC---------C--C--eEEecCCCHHHHHHHHHhh-----CCCE
Confidence            6899999999999999999999999999999987543         0  1  6779999999888777754     7999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc----------CCCCcc
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------GLGPHA  167 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~----------~~~~~~  167 (280)
                      |||+||....      ..+.+++++.+++|+.++.++++++.+.     +++||++||.....+          ..+...
T Consensus        64 vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~  132 (315)
T 2ydy_A           64 IVHCAAERRP------DVVENQPDAASQLNVDASGNLAKEAAAV-----GAFLIYISSDYVFDGTNPPYREEDIPAPLNL  132 (315)
T ss_dssp             EEECC-------------------------CHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSSSCSBCTTSCCCCCSH
T ss_pred             EEECCcccCh------hhhhcCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEchHHHcCCCCCCCCCCCCCCCcCH
Confidence            9999997532      1345678999999999999999999873     259999999886544          234678


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccc---cCCCcchhhhhhh-hhhHHHHhhhccCCCCCCCHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLAL---AHLPEEERTEDAM-VGFRNFVARNANMQGTELTANDV  243 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dv  243 (280)
                      |+.+|++.+.+++.++.       .+..+.|+.+..+...   .....  ...... .+ ..... .......+++++|+
T Consensus       133 Y~~sK~~~e~~~~~~~~-------~~~~lR~~~v~G~~~~~~~~~~~~--~~~~~~~~~-~~~~~-~~~~~~~~i~v~Dv  201 (315)
T 2ydy_A          133 YGKTKLDGEKAVLENNL-------GAAVLRIPILYGEVEKLEESAVTV--MFDKVQFSN-KSANM-DHWQQRFPTHVKDV  201 (315)
T ss_dssp             HHHHHHHHHHHHHHHCT-------TCEEEEECSEECSCSSGGGSTTGG--GHHHHHCCS-SCEEE-ECSSBBCCEEHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-------CeEEEeeeeeeCCCCcccccHHHH--HHHHHHhcC-CCeee-ccCceECcEEHHHH
Confidence            99999999999988642       2345666666544322   11110  000000 00 00000 01123578899999


Q ss_pred             HHHHHHhcCCC-CCceeecEEEeCCCcc
Q 023553          244 ANAVLFLASDE-ARYISGTNLMVDGGFT  270 (280)
Q Consensus       244 a~~i~~l~s~~-~~~~~G~~i~~dgG~~  270 (280)
                      |++++++++.. .....|+.+++++|..
T Consensus       202 a~a~~~~~~~~~~~~~~~~~~~i~~~~~  229 (315)
T 2ydy_A          202 ATVCRQLAEKRMLDPSIKGTFHWSGNEQ  229 (315)
T ss_dssp             HHHHHHHHHHHHTCTTCCEEEECCCSCC
T ss_pred             HHHHHHHHHhhccccCCCCeEEEcCCCc
Confidence            99999998642 1234688999998854

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.87  E-value=5e-21  Score=157.63  Aligned_cols=203  Identities=13%  Similarity=0.087  Sum_probs=135.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +++||||+|+||+++++.|+++|++|++++|+.+......      ..+.++.+|++|+++         +.++++|++|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~D~~d~~~---------~~~~~~d~vi   66 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH------KDINILQKDIFDLTL---------SDLSDQNVVV   66 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC------SSSEEEECCGGGCCH---------HHHTTCSEEE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc------CCCeEEeccccChhh---------hhhcCCCEEE
Confidence            6999999999999999999999999999999987765442      367889999999876         2335899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC------------CCcc
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL------------GPHA  167 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~------------~~~~  167 (280)
                      |+||....               ....|+.+    ++.+++.+++.+.+++|++||..+..+.+            ....
T Consensus        67 ~~ag~~~~---------------~~~~~~~~----~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
T 3ew7_A           67 DAYGISPD---------------EAEKHVTS----LDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPY  127 (221)
T ss_dssp             ECCCSSTT---------------TTTSHHHH----HHHHHHHHCSCCSSEEEEECCCC-------------------CCC
T ss_pred             ECCcCCcc---------------ccchHHHH----HHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHH
Confidence            99997421               12334444    45566666666678999999988765443            2456


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |+.+|.+.+.+. .+..  ...|++++.+.||.+.++.....  .....      ...+..  ...-..+++++|+|+++
T Consensus       128 y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~--~~~~~------~~~~~~--~~~~~~~i~~~Dva~~~  194 (221)
T 3ew7_A          128 YPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTG--DYQIG------KDHLLF--GSDGNSFISMEDYAIAV  194 (221)
T ss_dssp             SCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC-------------------------------CCCHHHHHHHH
T ss_pred             HHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccC--ceEec------ccccee--cCCCCceEeHHHHHHHH
Confidence            999999998873 2322  15789999999999998722111  00000      000000  00013578999999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCccc
Q 023553          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +.++...  ...|+.+++.|-...
T Consensus       195 ~~~l~~~--~~~g~~~~~~~~~~~  216 (221)
T 3ew7_A          195 LDEIERP--NHLNEHFTVAGKLEH  216 (221)
T ss_dssp             HHHHHSC--SCTTSEEECCC----
T ss_pred             HHHHhCc--cccCCEEEECCCCcc
Confidence            9999653  357899998876543

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.87  E-value=1.3e-21  Score=172.16  Aligned_cols=223  Identities=13%  Similarity=0.061  Sum_probs=153.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+++++++|||||+|+||+++++.|+++|+.|++++|+........+.......+.++.+|+.+..            +
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~   89 (343)
T 2b69_A           22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------------Y   89 (343)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------------C
T ss_pred             ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------------h
Confidence            3457899999999999999999999999999999999875432211122222346788899998752            3


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc------------
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI------------  160 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~------------  160 (280)
                      .++|+|||+||....  ..    ..+++++.+++|+.++.++++++.+.    + .++|++||.+...            
T Consensus        90 ~~~d~vih~A~~~~~--~~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~~~~E~~~  158 (343)
T 2b69_A           90 IEVDQIYHLASPASP--PN----YMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYW  158 (343)
T ss_dssp             CCCSEEEECCSCCSH--HH----HTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCC
T ss_pred             cCCCEEEECccccCc--hh----hhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCCCCccccc
Confidence            589999999997532  10    11345788999999999999988764    2 4999999976542            


Q ss_pred             ----cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc----
Q 023553          161 ----GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN----  232 (280)
Q Consensus       161 ----~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  232 (280)
                          +..+...|+.+|++.+.+++.++.+.   |++++.+.||.+.++........  ....   ...........    
T Consensus       159 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~  230 (343)
T 2b69_A          159 GHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGR--VVSN---FILQALQGEPLTVYG  230 (343)
T ss_dssp             CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCC--HHHH---HHHHHHHTCCEEEES
T ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCccc--HHHH---HHHHHHcCCCceEcC
Confidence                22234579999999999999998774   79999999999998864321100  0000   01111111110    


Q ss_pred             ---CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          233 ---MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 ---~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                         ....++.++|+|++++.++...    .|+.+++.+|..
T Consensus       231 ~~~~~~~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~  267 (343)
T 2b69_A          231 SGSQTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEE  267 (343)
T ss_dssp             SSCCEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCE
T ss_pred             CCCeEEeeEeHHHHHHHHHHHHhcC----CCCeEEecCCCC
Confidence               1135789999999999998643    267788887753

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.87  E-value=1.6e-21  Score=171.39  Aligned_cols=226  Identities=16%  Similarity=0.083  Sum_probs=154.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcC-------CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHG-------AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g-------~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ..++++++|||||+|+||+++++.|+++|       ++|++++|+.+....     .....+.++.+|+++++++.++++
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~   84 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----GFSGAVDARAADLSAPGEAEKLVE   84 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----ccCCceeEEEcCCCCHHHHHHHHh
Confidence            34789999999999999999999999999       899999998653221     122467788999999998877664


Q ss_pred             HHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccccC-C-
Q 023553           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGG-L-  163 (280)
Q Consensus        87 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~~~-~-  163 (280)
                            +++|+|||+||...       ..+.+++++.+++|+.++.++++++.+...+. ..++||++||.+...+. + 
T Consensus        85 ------~~~d~vih~A~~~~-------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~  151 (342)
T 2hrz_A           85 ------ARPDVIFHLAAIVS-------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPY  151 (342)
T ss_dssp             ------TCCSEEEECCCCCH-------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCS
T ss_pred             ------cCCCEEEECCccCc-------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCC
Confidence                  48999999998642       13456789999999999999999988753211 14799999998765432 1 


Q ss_pred             ---------CCccchhhHHHHHHHHHHHHHHHC--CCCeEEEEEe--CCceeccccccCCCcchhhhhhhhhhHHHHhhh
Q 023553          164 ---------GPHAYTGSKHAVLGLNKNVAAELG--KYGIRVNCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       164 ---------~~~~Y~~sK~al~~~~~~la~e~~--~~gi~v~~v~--pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                               +...|+.+|++.+.+++.++.+..  ...+|+..+.  ||...+....       .....   ........
T Consensus       152 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~-------~~~~~---~~~~~~~~  221 (342)
T 2hrz_A          152 PIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASG-------FFSNI---LREPLVGQ  221 (342)
T ss_dssp             SBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGG-------HHHHH---HHHHHTTC
T ss_pred             CcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHH-------HHHHH---HHHHhcCC
Confidence                     567899999999999999887631  1234555555  6654432210       00000   01111111


Q ss_pred             c--cCC-----CCCCCHHHHHHHHHHhcCCCCC-ceeecEEEeCC
Q 023553          231 A--NMQ-----GTELTANDVANAVLFLASDEAR-YISGTNLMVDG  267 (280)
Q Consensus       231 ~--~~~-----~~~~~~~dva~~i~~l~s~~~~-~~~G~~i~~dg  267 (280)
                      .  .+.     ..+++++|+|++++.++..... ...|+++++.|
T Consensus       222 ~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g  266 (342)
T 2hrz_A          222 EAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG  266 (342)
T ss_dssp             CEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC
T ss_pred             CeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcCC
Confidence            0  011     1257899999999998854311 12467888854

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.86  E-value=1.7e-21  Score=168.91  Aligned_cols=221  Identities=15%  Similarity=0.094  Sum_probs=158.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKH--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      +|+++||||+|+||+++++.|+++  |++|++++|+..... ...      .+.++.+|+++.+++.+++++.     ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~------~~~~~~~D~~d~~~~~~~~~~~-----~~   69 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VVN------SGPFEVVNALDFNQIEHLVEVH-----KI   69 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HHH------SSCEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-ccC------CCceEEecCCCHHHHHHHHhhc-----CC
Confidence            478999999999999999999999  899999999866532 111      3557899999999988777643     79


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC------------C
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG------------L  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~------------~  163 (280)
                      |++||+||....       ...+++++.+++|+.++.++++++.+    .+.++||++||.....+.            .
T Consensus        70 d~vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~  138 (312)
T 2yy7_A           70 TDIYLMAALLSA-------TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYTIME  138 (312)
T ss_dssp             CEEEECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSCBCC
T ss_pred             CEEEECCccCCC-------chhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccCcCC
Confidence            999999986421       12356788999999999999998865    344699999998765431            2


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc-------cCCCC
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------NMQGT  236 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  236 (280)
                      +...|+.+|++.+.+++.++.++   |++++.+.|+.+..+...........   ....+........       .....
T Consensus       139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  212 (312)
T 2yy7_A          139 PSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDY---AVDIFYKAIADKKYECFLSSETKMP  212 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTH---HHHHHHHHHHTSEEEESSCTTCCEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhh---HHHHHHHHHcCCCeEEecCCCceee
Confidence            35689999999999999998875   79999999999988653221110000   0011111111111       01235


Q ss_pred             CCCHHHHHHHHHHhcCCCCCce-eecEEEeCC
Q 023553          237 ELTANDVANAVLFLASDEARYI-SGTNLMVDG  267 (280)
Q Consensus       237 ~~~~~dva~~i~~l~s~~~~~~-~G~~i~~dg  267 (280)
                      ++.++|+|++++.++....... .|+++++.|
T Consensus       213 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          213 MMYMDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             EEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             eeeHHHHHHHHHHHHhCcccccccCceEEeCC
Confidence            6789999999999986543222 257888875

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.86  E-value=6.9e-21  Score=166.97  Aligned_cols=231  Identities=15%  Similarity=0.123  Sum_probs=153.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc----hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDN----LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ++|||||+|+||++++++|+++|++|++++|...    ..+.+.+..  ...+.++.+|+++++++.++++.     .++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~-----~~~   74 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHD-----HAI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHH-----TTC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhc-----cCC
Confidence            6999999999999999999999999999876432    222221111  13567889999999998777764     279


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------C-C
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------G-L  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-----------~-~  163 (280)
                      |+|||+||....  .    ...+++.+.+++|+.++.++++++..    .+.++||++||.+....           . +
T Consensus        75 D~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~  144 (338)
T 1udb_A           75 DTVIHFAGLKAV--G----ESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSSSATVYGDNPKIPYVESFPTGT  144 (338)
T ss_dssp             SEEEECCSCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred             CEEEECCccCcc--c----cchhcHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEEccHHHhCCCCCCCcCcccCCCC
Confidence            999999997532  1    12345678899999999999887654    34579999999765421           1 2


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh--hhhhhhhhHHHHh-hhc---------
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVA-RNA---------  231 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~---------  231 (280)
                      ....|+.||++.+.+++.++.++  .|+++..+.|+.+..+.....+.....  .......+..... +..         
T Consensus       145 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  222 (338)
T 1udb_A          145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             CCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcc
Confidence            36789999999999999999884  378999999988876532111100000  0000011111111 000         


Q ss_pred             -----cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          232 -----NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       232 -----~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                           .....++.++|+|++++.++........++++++.+|.
T Consensus       223 ~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~  265 (338)
T 1udb_A          223 PTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGV  265 (338)
T ss_dssp             SSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSC
T ss_pred             cCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCC
Confidence                 01125788999999998887532111234788887764

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.86  E-value=2.4e-21  Score=184.65  Aligned_cols=226  Identities=12%  Similarity=0.075  Sum_probs=161.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHH-HHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED-VCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   92 (280)
                      .+++++++||||+|+||++++++|++. |++|++++|+.......    .....+.++.+|+++.++ +.++++      
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~~~~~v~~v~~Dl~d~~~~~~~~~~------  381 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----LNHPHFHFVEGDISIHSEWIEYHVK------  381 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----TTCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----ccCCceEEEECCCCCcHHHHHHhhc------
Confidence            357899999999999999999999998 89999999987654321    123467889999998765 444443      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC---------
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL---------  163 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~---------  163 (280)
                       ++|+|||+||....  .    ...+++.+.+++|+.+..++++++.+.    + ++||++||........         
T Consensus       382 -~~D~Vih~Aa~~~~--~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-~r~V~~SS~~vyg~~~~~~~~E~~~  449 (660)
T 1z7e_A          382 -KCDVVLPLVAIATP--I----EYTRNPLRVFELDFEENLRIIRYCVKY----R-KRIIFPSTSEVYGMCSDKYFDEDHS  449 (660)
T ss_dssp             -HCSEEEECCCCCCT--H----HHHHSHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEECCGGGGBTCCSSSBCTTTC
T ss_pred             -CCCEEEECceecCc--c----ccccCHHHHHHhhhHHHHHHHHHHHHh----C-CEEEEEecHHHcCCCCCcccCCCcc
Confidence             78999999997532  1    123457889999999999999888763    3 7999999976643211         


Q ss_pred             ---------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccC----CCcchhhhhhhhhhH-HHHhh
Q 023553          164 ---------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAH----LPEEERTEDAMVGFR-NFVAR  229 (280)
Q Consensus       164 ---------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~----~~~~~~~~~~~~~~~-~~~~~  229 (280)
                               ....|+.||++.+.+++.++.++   |++++.+.||.+.++.....    ......    ...+. .....
T Consensus       450 ~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~----~~~~~~~~~~g  522 (660)
T 1z7e_A          450 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRA----ITQLILNLVEG  522 (660)
T ss_dssp             CEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCH----HHHHHHHHHHT
T ss_pred             ccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccch----HHHHHHHHHcC
Confidence                     12369999999999999998875   79999999999998864321    000000    00011 11111


Q ss_pred             hc-------cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          230 NA-------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       230 ~~-------~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ..       .....+++++|+|++++++++......+|+++++++|-
T Consensus       523 ~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          523 SPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             CCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             CCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence            11       01135788999999999999754444678999999873

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.85  E-value=5.6e-22  Score=162.76  Aligned_cols=201  Identities=13%  Similarity=0.050  Sum_probs=147.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+++++||||+|+||+++++.|+++|+  +|++++|+.+.         ....+.++.+|+++++++.+++         
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~~~~~~~~~~D~~~~~~~~~~~---------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRLDNPVGPLAELLPQLDGS---------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTEECCBSCHHHHGGGCCSC---------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------cCCCceEEeccccCHHHHHHhh---------
Confidence            478999999999999999999999998  99999998765         1235777889998877654433         


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++||+||....        +.+++++.+++|+.+...+++++.+.    +.++||++||..+..+  +...|+.+|++
T Consensus        66 ~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~--~~~~y~~sK~~  131 (215)
T 2a35_A           66 IDTAFCCLGTTIK--------EAGSEEAFRAVDFDLPLAVGKRALEM----GARHYLVVSALGADAK--SSIFYNRVKGE  131 (215)
T ss_dssp             CSEEEECCCCCHH--------HHSSHHHHHHHHTHHHHHHHHHHHHT----TCCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred             hcEEEECeeeccc--------cCCCHHHHHHhhHHHHHHHHHHHHHc----CCCEEEEECCcccCCC--CccHHHHHHHH
Confidence            8999999996421        23467889999999999999988653    4568999999877643  45689999999


Q ss_pred             HHHHHHHHHHHHCCCCeE-EEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          175 VLGLNKNVAAELGKYGIR-VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~-v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      ++.+++.       .|++ ++.+.||++.++.....+... .. .   ....+..   . ...+++++|+|++++.++..
T Consensus       132 ~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~-~~-~---~~~~~~~---~-~~~~i~~~Dva~~~~~~~~~  195 (215)
T 2a35_A          132 LEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEI-LA-A---PIARILP---G-KYHGIEACDLARALWRLALE  195 (215)
T ss_dssp             HHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGG-TT-C---CCC-------C-HHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHH-HH-H---hhhhccC---C-CcCcEeHHHHHHHHHHHHhc
Confidence            9988765       3798 999999999988643111000 00 0   0000000   0 12457889999999999975


Q ss_pred             CCCceeecEEEeCCCc
Q 023553          254 EARYISGTNLMVDGGF  269 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~  269 (280)
                      ..    |+.+++.++-
T Consensus       196 ~~----~~~~~i~~~~  207 (215)
T 2a35_A          196 EG----KGVRFVESDE  207 (215)
T ss_dssp             CC----SEEEEEEHHH
T ss_pred             CC----CCceEEcHHH
Confidence            43    6677776653

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.84  E-value=8.2e-21  Score=163.16  Aligned_cols=198  Identities=16%  Similarity=0.122  Sum_probs=147.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ...+++|||||+|+||+++++.|+++|++|++++|+                    .+|+++.+++.++++..     ++
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~Dl~d~~~~~~~~~~~-----~~   64 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------DLDITNVLAVNKFFNEK-----KP   64 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc--------------------cCCCCCHHHHHHHHHhc-----CC
Confidence            457899999999999999999999999999999986                    27999999988777754     89


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC-----------C
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-----------G  164 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~-----------~  164 (280)
                      |++||+||....      +.+.+++++.+++|+.++.++++++.+.    + .+||++||.+...+..           +
T Consensus        65 d~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-~~iv~~SS~~v~~~~~~~~~~E~~~~~~  133 (292)
T 1vl0_A           65 NVVINCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSV----G-AEIVQISTDYVFDGEAKEPITEFDEVNP  133 (292)
T ss_dssp             SEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSCCSSCBCTTSCCCC
T ss_pred             CEEEECCccCCH------HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEechHHeECCCCCCCCCCCCCCCC
Confidence            999999986431      2234678899999999999999998773    2 3999999986654322           3


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc-----cCCCCCCC
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-----NMQGTELT  239 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  239 (280)
                      ...|+.+|++.+.+++.++.       .+..+.|+.+.++ .....+  ..       .........     .....+++
T Consensus       134 ~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~i~  196 (292)
T 1vl0_A          134 QSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFVK--TM-------INLGKTHDELKVVHDQVGTPTS  196 (292)
T ss_dssp             CSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHHH--HH-------HHHHHHCSEEEEESSCEECCEE
T ss_pred             ccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChHH--HH-------HHHHhcCCcEEeecCeeeCCcc
Confidence            56899999999999987642       3678889988866 211100  00       000111110     01256789


Q ss_pred             HHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          240 ANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       240 ~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+|++++++++..    .|+.+++++|..
T Consensus       197 v~Dva~~~~~~~~~~----~~~~~~i~~~~~  223 (292)
T 1vl0_A          197 TVDLARVVLKVIDEK----NYGTFHCTCKGI  223 (292)
T ss_dssp             HHHHHHHHHHHHHHT----CCEEEECCCBSC
T ss_pred             HHHHHHHHHHHHhcC----CCcEEEecCCCC
Confidence            999999999999753    688999988753

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.84  E-value=1e-21  Score=170.70  Aligned_cols=215  Identities=16%  Similarity=0.097  Sum_probs=144.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch---HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL---GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .+++++++|||||+|+||+++++.|+++|++|++++|+...   .............+.++.+|++              
T Consensus         3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--------------   68 (321)
T 3vps_A            3 RNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS--------------   68 (321)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT--------------
T ss_pred             cccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc--------------
Confidence            34678999999999999999999999999999999998652   1111111111123334444444              


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC--------
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--------  162 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~--------  162 (280)
                         ++|++||+|+....  .    ...++....++ |+.+..++++++...    +-.+||++||.......        
T Consensus        69 ---~~d~vi~~a~~~~~--~----~~~~~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~~~~~~~~~~E~  134 (321)
T 3vps_A           69 ---DVRLVYHLASHKSV--P----RSFKQPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVYGQADTLPTPED  134 (321)
T ss_dssp             ---TEEEEEECCCCCCH--H----HHTTSTTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             ---cCCEEEECCccCCh--H----HHHhCHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHhCCCCCCCCCCC
Confidence               89999999997642  0    01112233455 999999999888664    24699999997764332        


Q ss_pred             ---CCCccchhhHHHHHHHHHHHHHHHCCCCe-EEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc-------
Q 023553          163 ---LGPHAYTGSKHAVLGLNKNVAAELGKYGI-RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------  231 (280)
Q Consensus       163 ---~~~~~Y~~sK~al~~~~~~la~e~~~~gi-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  231 (280)
                         .+...|+.+|.+.+.+++.++.+   .|+ ++..+.|+.+.++...........       .........       
T Consensus       135 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~  204 (321)
T 3vps_A          135 SPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRL-------CANLLTRNELPVEGDG  204 (321)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHH-------HHHHHHHSEEEEETTS
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHH-------HHHHHcCCCeEEeCCC
Confidence               12578999999999999998876   578 999999999998864431100000       111111111       


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 ~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .....+++++|+|++++.++.....   | ++++.+|..
T Consensus       205 ~~~~~~v~v~Dva~~~~~~~~~~~~---g-~~~i~~~~~  239 (321)
T 3vps_A          205 EQRRDFTYITDVVDKLVALANRPLP---S-VVNFGSGQS  239 (321)
T ss_dssp             CCEECEEEHHHHHHHHHHGGGSCCC---S-EEEESCSCC
T ss_pred             CceEceEEHHHHHHHHHHHHhcCCC---C-eEEecCCCc
Confidence            1123678999999999999976543   7 999998764

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.84  E-value=2.4e-20  Score=161.38  Aligned_cols=221  Identities=14%  Similarity=0.080  Sum_probs=151.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchH--HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           20 VALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLG--QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++|||||+|+||++++++|+++| +.|++++|+....  ... .      .+. +.+|+++.+.+.++++...  ++++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~------~~~-~~~d~~~~~~~~~~~~~~~--~~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL-V------DLN-IADYMDKEDFLIQIMAGEE--FGDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH-H------TSC-CSEEEEHHHHHHHHHTTCC--CSSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhc-C------cce-eccccccHHHHHHHHhccc--cCCCc
Confidence            48999999999999999999999 8999999876542  211 1      111 5689998887766654110  12699


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC-----------CC
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-----------GP  165 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~-----------~~  165 (280)
                      ++||+||....        +.+++++.+++|+.++.++++++.+.    +. ++|++||........           +.
T Consensus        71 ~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~  137 (310)
T 1eq2_A           71 AIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKPL  137 (310)
T ss_dssp             EEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS
T ss_pred             EEEECcccccC--------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCC
Confidence            99999997532        22356888999999999999998764    34 999999986543222           25


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhh----hhhHHHHhhhccC-CCCCCCH
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAM----VGFRNFVARNANM-QGTELTA  240 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~  240 (280)
                      ..|+.+|.+.+.+++.++.+   .|++++.+.||.+.++................    .+........... ...++++
T Consensus       138 ~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v  214 (310)
T 1eq2_A          138 NVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYV  214 (310)
T ss_dssp             SHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEH
T ss_pred             ChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEH
Confidence            68999999999999998765   58999999999999886431100000000000    0000000000111 2467889


Q ss_pred             HHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          241 NDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       241 ~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +|+|++++.++....    |+.+++.+|..
T Consensus       215 ~Dva~~~~~~~~~~~----~~~~~i~~~~~  240 (310)
T 1eq2_A          215 GDVADVNLWFLENGV----SGIFNLGTGRA  240 (310)
T ss_dssp             HHHHHHHHHHHHHCC----CEEEEESCSCC
T ss_pred             HHHHHHHHHHHhcCC----CCeEEEeCCCc
Confidence            999999999996543    78999988753

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.84  E-value=2e-20  Score=162.47  Aligned_cols=217  Identities=16%  Similarity=0.161  Sum_probs=153.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           20 VALITGGATGIGESTVRLFHKH--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      ++|||||+|+||+++++.|+++  |+.|++++|+.....          .+.++.+|+++.+++.++++.     .++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----------~~~~~~~D~~d~~~~~~~~~~-----~~~d~   65 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----------GIKFITLDVSNRDEIDRAVEK-----YSIDA   65 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----------TCCEEECCTTCHHHHHHHHHH-----TTCCE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----------CceEEEecCCCHHHHHHHHhh-----cCCcE
Confidence            4899999999999999999999  899999998765421          345788999999998877764     28999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC------------CC
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL------------GP  165 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~------------~~  165 (280)
                      |||+|+....       ...+++++.+++|+.++.++++++.+    .+.++||++||.....+..            +.
T Consensus        66 vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~  134 (317)
T 3ajr_A           66 IFHLAGILSA-------KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITITRPR  134 (317)
T ss_dssp             EEECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred             EEECCcccCC-------ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence            9999986421       12356788999999999999998865    3456999999987654321            35


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc-------cCCCCCC
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------NMQGTEL  238 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~  238 (280)
                      ..|+.+|++.+.+++.++.++   |++++.+.|+.+..+............   ...+........       .....++
T Consensus       135 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i  208 (317)
T 3ajr_A          135 TMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYA---VEIFYYAVKREKYKCYLAPNRALPMM  208 (317)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHH---HHHHHHHHTTCCEEECSCTTCCEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHH---HHHHHHHHhCCCceeecCccceeeee
Confidence            789999999999999988764   799999987776654321110000000   000111111110       0113457


Q ss_pred             CHHHHHHHHHHhcCCCCC-ceeecEEEeCCC
Q 023553          239 TANDVANAVLFLASDEAR-YISGTNLMVDGG  268 (280)
Q Consensus       239 ~~~dva~~i~~l~s~~~~-~~~G~~i~~dgG  268 (280)
                      .++|+|++++.++..... ..+|+.+++.|+
T Consensus       209 ~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          209 YMPDALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             EHHHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             EHHHHHHHHHHHHhCCccccccCceEecCCc
Confidence            899999999988864332 335788999864

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.84  E-value=6.8e-20  Score=175.74  Aligned_cols=242  Identities=12%  Similarity=0.076  Sum_probs=159.0

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +++++++|++|||||+|+||+++++.|+++|++|++++|+.....+..+.+.  ....+.++.+|+++++++.++++.. 
T Consensus         5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-   83 (699)
T 1z45_A            5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-   83 (699)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-
Confidence            3456789999999999999999999999999999999987543221111110  1235678899999999988777642 


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc--------
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--------  161 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~--------  161 (280)
                          ++|+|||+||....  .    ...+...+.+++|+.++.++++++..    .+.++||++||.+....        
T Consensus        84 ----~~D~Vih~A~~~~~--~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~~iV~~SS~~vyg~~~~~~~~~  149 (699)
T 1z45_A           84 ----KIDSVIHFAGLKAV--G----ESTQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMI  149 (699)
T ss_dssp             ----CCCEEEECCSCCCH--H----HHHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCC
T ss_pred             ----CCCEEEECCcccCc--C----ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECcHHHhCCCccccccC
Confidence                89999999997532  1    11233467899999999998887654    34579999999765421        


Q ss_pred             -------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh--hhhhhhhhHHHHhhh--
Q 023553          162 -------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVARN--  230 (280)
Q Consensus       162 -------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~--  230 (280)
                             ..+...|+.+|++.+.+++.++.++ ..|+++..+.|+.+..+...........  .......+.......  
T Consensus       150 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  228 (699)
T 1z45_A          150 PIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRRE  228 (699)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSS
T ss_pred             CccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCC
Confidence                   1134689999999999999998875 3579999999999887642211111000  000001111111110  


Q ss_pred             c-------------cCCCCCCCHHHHHHHHHHhcCCC----CCceeecEEEeCCCc
Q 023553          231 A-------------NMQGTELTANDVANAVLFLASDE----ARYISGTNLMVDGGF  269 (280)
Q Consensus       231 ~-------------~~~~~~~~~~dva~~i~~l~s~~----~~~~~G~~i~~dgG~  269 (280)
                      .             .....++.++|+|++++.++...    .....|+++++.+|.
T Consensus       229 ~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~  284 (699)
T 1z45_A          229 KLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGK  284 (699)
T ss_dssp             CCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSC
T ss_pred             ceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCC
Confidence            0             01135678999999998887421    112346788887775

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.83  E-value=7.8e-20  Score=159.06  Aligned_cols=213  Identities=14%  Similarity=0.078  Sum_probs=152.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +++++||||+|+||+++++.|+++|+.|+++.|+.                   .+|+++.+++.++++..     ++|+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------~~D~~d~~~~~~~~~~~-----~~d~   58 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------ELNLLDSRAVHDFFASE-----RIDQ   58 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------TCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------cCCccCHHHHHHHHHhc-----CCCE
Confidence            57899999999999999999999999999988763                   26999999988777654     8999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc----------------
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------------  161 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~----------------  161 (280)
                      |||+|+....     .....++..+.+++|+.+..++++++.+.    +..++|++||......                
T Consensus        59 vih~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~  129 (321)
T 1e6u_A           59 VYLAAAKVGG-----IVANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  129 (321)
T ss_dssp             EEECCCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             EEEcCeecCC-----cchhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCeEEEEccHHHcCCCCCCCcCccccccCCC
Confidence            9999986431     11233456788999999999999988763    3469999999766421                


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHh------hhc----
Q 023553          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA------RNA----  231 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~----  231 (280)
                      .+....|+.+|.+.+.+++.++.++   |++++.+.|+.+.++...............   ...+..      ...    
T Consensus       130 ~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~  203 (321)
T 1e6u_A          130 EPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPAL---LRRFHEATAQKAPDVVVWG  203 (321)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHH---HHHHHHHHHHTCSEEEEES
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHH---HHHHHHhhhcCCCceEEcC
Confidence            1112589999999999999998775   799999999999988653211100000000   011110      000    


Q ss_pred             --cCCCCCCCHHHHHHHHHHhcCCCCCc------eeecEEEeCCCc
Q 023553          232 --NMQGTELTANDVANAVLFLASDEARY------ISGTNLMVDGGF  269 (280)
Q Consensus       232 --~~~~~~~~~~dva~~i~~l~s~~~~~------~~G~~i~~dgG~  269 (280)
                        .....++.++|+|++++.++......      ..|+++++.+|.
T Consensus       204 ~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~  249 (321)
T 1e6u_A          204 SGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGV  249 (321)
T ss_dssp             CSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSC
T ss_pred             CCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCC
Confidence              01236779999999999998643211      136888887764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.83  E-value=3.1e-19  Score=163.98  Aligned_cols=227  Identities=14%  Similarity=0.063  Sum_probs=157.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc---CCeEEEEecCcchHHHH---HHHhCC-------------CCCeEEEecCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKH---GAKVCIADVQDNLGQQV---CQSLGG-------------EPDTFFCHCDV   75 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~---g~~Vi~~~r~~~~~~~~---~~~~~~-------------~~~~~~~~~D~   75 (280)
                      ..++|+||||||+|+||++++++|++.   |++|++++|+.......   .+.+..             ..++.++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            467999999999999999999999999   99999999987643222   122211             24788999999


Q ss_pred             C------CHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCce
Q 023553           76 T------KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGT  149 (280)
Q Consensus        76 ~------~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~  149 (280)
                      +      +.+++.++++       ++|+|||+||....          +.+.+.+++|+.++.++++++..    .+..+
T Consensus       150 ~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~----------~~~~~~~~~Nv~gt~~ll~aa~~----~~~~~  208 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA----------FPYHELFGPNVAGTAELIRIALT----TKLKP  208 (478)
T ss_dssp             TSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB----------SSCCEEHHHHHHHHHHHHHHHTS----SSCCC
T ss_pred             CCcccCCCHHHHHHHHc-------CCCEEEECccccCC----------cCHHHHHHHHHHHHHHHHHHHHh----CCCCe
Confidence            8      5566665554       79999999997532          23456789999999998888754    33468


Q ss_pred             EEEEccccccccCCC----------------------CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccc
Q 023553          150 IISICSVAGAIGGLG----------------------PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLAL  207 (280)
Q Consensus       150 iv~isS~~~~~~~~~----------------------~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~  207 (280)
                      ||++||.+.......                      ...|+.||.+.+.+++.++.+.   |++++.+.||.|..+...
T Consensus       209 ~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~~  285 (478)
T 4dqv_A          209 FTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTSY  285 (478)
T ss_dssp             EEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSSS
T ss_pred             EEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCcc
Confidence            999999765332111                      1349999999999999998874   799999999999886431


Q ss_pred             cC-CCcchhhhhhhhhhHHHHhh--hcc--------------CCCCCCCHHHHHHHHHHhcCCC--CCceeecEEEeCCC
Q 023553          208 AH-LPEEERTEDAMVGFRNFVAR--NAN--------------MQGTELTANDVANAVLFLASDE--ARYISGTNLMVDGG  268 (280)
Q Consensus       208 ~~-~~~~~~~~~~~~~~~~~~~~--~~~--------------~~~~~~~~~dva~~i~~l~s~~--~~~~~G~~i~~dgG  268 (280)
                      .. .........    +......  ..+              ..-.++.++|+|++++.++...  .....|+++++.++
T Consensus       286 ~g~~~~~~~~~~----l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~  361 (478)
T 4dqv_A          286 AGQLNMSDWVTR----MVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNP  361 (478)
T ss_dssp             SSCCCTTBHHHH----HHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCC
T ss_pred             CCcCCHHHHHHH----HHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCC
Confidence            11 111111110    1111111  111              1125689999999999987531  12346889999876


Q ss_pred             c
Q 023553          269 F  269 (280)
Q Consensus       269 ~  269 (280)
                      -
T Consensus       362 ~  362 (478)
T 4dqv_A          362 H  362 (478)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.83  E-value=3.5e-20  Score=157.51  Aligned_cols=193  Identities=19%  Similarity=0.180  Sum_probs=139.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +++||||+|+||+++++.|++ |++|++++|+.+..       .   .   +.+|+++++++.++++..     ++|++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-------~---~---~~~Dl~~~~~~~~~~~~~-----~~d~vi   62 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-------G---G---YKLDLTDFPRLEDFIIKK-----RPDVII   62 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-------T---C---EECCTTSHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-------C---C---ceeccCCHHHHHHHHHhc-----CCCEEE
Confidence            699999999999999999995 89999999987531       1   1   789999999998888754     799999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC----------CCccch
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----------GPHAYT  169 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~----------~~~~Y~  169 (280)
                      |+||....      +.+.+++++.+++|+.++.++++++.+.     +++||++||..+..+.+          +...|+
T Consensus        63 ~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~  131 (273)
T 2ggs_A           63 NAAAMTDV------DKCEIEKEKAYKINAEAVRHIVRAGKVI-----DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYG  131 (273)
T ss_dssp             ECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH
T ss_pred             ECCcccCh------hhhhhCHHHHHHHhHHHHHHHHHHHHHh-----CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHH
Confidence            99997532      1334678999999999999999998762     35999999988765433          257899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccC-----CCCCCCHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-----QGTELTANDVA  244 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~dva  244 (280)
                      .+|++++.+++.    +.     ...+.|+.+..+   ..+.         ..+..........     ..++++++|+|
T Consensus       132 ~sK~~~e~~~~~----~~-----~~~iR~~~v~G~---~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~dva  190 (273)
T 2ggs_A          132 LSKLLGETFALQ----DD-----SLIIRTSGIFRN---KGFP---------IYVYKTLKEGKTVFAFKGYYSPISARKLA  190 (273)
T ss_dssp             HHHHHHHHHHCC----TT-----CEEEEECCCBSS---SSHH---------HHHHHHHHTTCCEEEESCEECCCBHHHHH
T ss_pred             HHHHHHHHHHhC----CC-----eEEEeccccccc---cHHH---------HHHHHHHHcCCCEEeecCCCCceEHHHHH
Confidence            999999999877    22     344555555421   0000         0000000010000     25789999999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCC
Q 023553          245 NAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dg  267 (280)
                      ++++++++...   +| +++++|
T Consensus       191 ~~i~~~~~~~~---~g-~~~i~~  209 (273)
T 2ggs_A          191 SAILELLELRK---TG-IIHVAG  209 (273)
T ss_dssp             HHHHHHHHHTC---CE-EEECCC
T ss_pred             HHHHHHHhcCc---CC-eEEECC
Confidence            99999997532   45 888887

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.82  E-value=6e-20  Score=158.88  Aligned_cols=222  Identities=11%  Similarity=0.039  Sum_probs=150.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .++++++|||||+|+||+++++.|+++|+      +....          ...+.++.+|++|.+++.++++..     +
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~-----~   61 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED----------WVFVSSKDADLTDTAQTRALFEKV-----Q   61 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE----------EEECCTTTCCTTSHHHHHHHHHHS-----C
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc----------ccccCceecccCCHHHHHHHHhhc-----C
Confidence            35789999999999999999999999998      11000          012233468999999988777642     7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-------------
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-------------  161 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-------------  161 (280)
                      +|+|||+|+....     ...+.++..+.+++|+.++.++++++...    +-.+||++||.+....             
T Consensus        62 ~d~Vih~A~~~~~-----~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~~~~  132 (319)
T 4b8w_A           62 PTHVIHLAAMVGG-----LFRNIKYNLDFWRKNVHMNDNVLHSAFEV----GARKVVSCLSTCIFPDKTTYPIDETMIHN  132 (319)
T ss_dssp             CSEEEECCCCCCC-----HHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSCSSCCSSBCGGGGGB
T ss_pred             CCEEEECceeccc-----ccccccCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEEcchhhcCCCCCCCcccccccc
Confidence            9999999997431     11223456778999999999999988653    3469999999865421             


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc------
Q 023553          162 ---GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN------  232 (280)
Q Consensus       162 ---~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  232 (280)
                         .+....|+.+|.+.+.+++.++++.   |+++..+.|+.+..+..................+.........      
T Consensus       133 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (319)
T 4b8w_A          133 GPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGT  209 (319)
T ss_dssp             SCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESC
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCC
Confidence               1122269999999999999998875   7999999999999886543211111100000110000111111      


Q ss_pred             --CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          233 --MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 --~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                        ....++.++|+|++++.++.... ...|+++++.+|..
T Consensus       210 g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~ni~~~~~  248 (319)
T 4b8w_A          210 GNPRRQFIYSLDLAQLFIWVLREYN-EVEPIILSVGEEDE  248 (319)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHHCC-CSSCEEECCCGGGC
T ss_pred             CCeeEEEEeHHHHHHHHHHHHhccc-cCCceEEEecCCCc
Confidence              11356899999999999986432 24577888877643

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.82  E-value=4.3e-19  Score=151.95  Aligned_cols=200  Identities=11%  Similarity=0.015  Sum_probs=145.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           19 RVALITGGATGIGESTVRLFHKH--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      |+++||||+|+||+++++.|+++  |++|++++|+.+....+..     ..+.++.+|++|++++.++++       ++|
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~d~~~l~~~~~-------~~d   68 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-----QGVEVRHGDYNQPESLQKAFA-------GVS   68 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-----TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-----cCCeEEEeccCCHHHHHHHHh-------cCC
Confidence            46999999999999999999999  9999999998776554432     246788999999988776655       799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++||+|+.. .        . +      ++|+.+..++++++..    .+-++||++||..+. +  ....|+.+|.+.+
T Consensus        69 ~vi~~a~~~-~--------~-~------~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~-~--~~~~y~~~K~~~E  125 (287)
T 2jl1_A           69 KLLFISGPH-Y--------D-N------TLLIVQHANVVKAARD----AGVKHIAYTGYAFAE-E--SIIPLAHVHLATE  125 (287)
T ss_dssp             EEEECCCCC-S--------C-H------HHHHHHHHHHHHHHHH----TTCSEEEEEEETTGG-G--CCSTHHHHHHHHH
T ss_pred             EEEEcCCCC-c--------C-c------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC-C--CCCchHHHHHHHH
Confidence            999999852 1        1 1      5788888888887754    345699999998764 2  2358999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~  256 (280)
                      .+++.       .|++++.+.||.+.++........      ... ..............+++++|+|++++.++.... 
T Consensus       126 ~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-  190 (287)
T 2jl1_A          126 YAIRT-------TNIPYTFLRNALYTDFFVNEGLRA------STE-SGAIVTNAGSGIVNSVTRNELALAAATVLTEEG-  190 (287)
T ss_dssp             HHHHH-------TTCCEEEEEECCBHHHHSSGGGHH------HHH-HTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS-
T ss_pred             HHHHH-------cCCCeEEEECCEeccccchhhHHH------Hhh-CCceeccCCCCccCccCHHHHHHHHHHHhcCCC-
Confidence            98853       589999999999877642111100      000 000000000112478899999999999996532 


Q ss_pred             ceeecEEEeCCCc
Q 023553          257 YISGTNLMVDGGF  269 (280)
Q Consensus       257 ~~~G~~i~~dgG~  269 (280)
                       ..|+.++++||.
T Consensus       191 -~~g~~~~i~~~~  202 (287)
T 2jl1_A          191 -HENKTYNLVSNQ  202 (287)
T ss_dssp             -CTTEEEEECCSS
T ss_pred             -CCCcEEEecCCC
Confidence             478999999884

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.81  E-value=8.1e-20  Score=156.56  Aligned_cols=193  Identities=14%  Similarity=0.074  Sum_probs=145.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      ++|||||+|+||+++++.|+++|++|++++|.                    .+|+++.+++.++++..     ++|++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~D~~d~~~~~~~~~~~-----~~d~vi   61 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK--------------------LLDITNISQVQQVVQEI-----RPHIII   61 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------TSCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------ccCCCCHHHHHHHHHhc-----CCCEEE
Confidence            89999999999999999999999999999992                    37999999988888755     899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCccc
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  168 (280)
                      |+||....      ..+.+++++.+++|+.++.++++++.+.     +.++|++||.....+.           .+...|
T Consensus        62 ~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  130 (287)
T 3sc6_A           62 HCAAYTKV------DQAEKERDLAYVINAIGARNVAVASQLV-----GAKLVYISTDYVFQGDRPEGYDEFHNPAPINIY  130 (287)
T ss_dssp             ECCCCCCH------HHHTTCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred             ECCcccCh------HHHhcCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence            99997532      1122467889999999999999998764     2489999998765332           235689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc------cCCCCCCCHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA------NMQGTELTAND  242 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d  242 (280)
                      +.+|.+.+.+++.++.       .+..+.|+.+.++......+          .+........      .....++.++|
T Consensus       131 ~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~i~v~D  193 (287)
T 3sc6_A          131 GASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVK----------TMIRLGKEREEISVVADQIGSPTYVAD  193 (287)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHH----------HHHHHHTTCSEEEEECSCEECCEEHHH
T ss_pred             HHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHH----------HHHHHHHcCCCeEeecCcccCceEHHH
Confidence            9999999999987643       45889999998875322110          0111111100      01246778999


Q ss_pred             HHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          243 VANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       243 va~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      +|+++++++....    ++.+++.+|.
T Consensus       194 va~~~~~~~~~~~----~~~~~i~~~~  216 (287)
T 3sc6_A          194 LNVMINKLIHTSL----YGTYHVSNTG  216 (287)
T ss_dssp             HHHHHHHHHTSCC----CEEEECCCBS
T ss_pred             HHHHHHHHHhCCC----CCeEEEcCCC
Confidence            9999999997643    6688988875

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.81  E-value=2.5e-19  Score=165.76  Aligned_cols=224  Identities=14%  Similarity=0.065  Sum_probs=155.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH---HHHHHHh----------CCCCCeEEEecCCCCHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG---QQVCQSL----------GGEPDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~---~~~~~~~----------~~~~~~~~~~~D~~~~~~~~~   83 (280)
                      ..++||||||+|+||+.++++|.+.|++|+++.|+....   +.+.+.+          ....++.++.+|+++++++. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            358999999999999999999999999999999987632   2221111          11257889999999977765 


Q ss_pred             HHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc--cc-
Q 023553           84 AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG--AI-  160 (280)
Q Consensus        84 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~--~~-  160 (280)
                             ...++|+|||+|+....         ..+++..+++|+.+..++++++.+     +..++|++||...  .. 
T Consensus       228 -------~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~  286 (508)
T 4f6l_B          228 -------LPENMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFD  286 (508)
T ss_dssp             -------CSSCCSEEEECCCC-----------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEEC
T ss_pred             -------CccCCCEEEECCceecC---------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCc
Confidence                   34699999999987532         235677889999999999998866     3479999999877  10 


Q ss_pred             ---------------cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHH
Q 023553          161 ---------------GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRN  225 (280)
Q Consensus       161 ---------------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  225 (280)
                                     +......|+.+|.+.+.+++.++.    .|++++.+.||.+.++.....+...... .....+..
T Consensus       287 ~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~-~~~~~~i~  361 (508)
T 4f6l_B          287 IDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKT-NRFSMVMN  361 (508)
T ss_dssp             TTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTT-CHHHHHHH
T ss_pred             cCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcch-HHHHHHHH
Confidence                           011457899999999999988653    5899999999999988754432211000 00000111


Q ss_pred             HHhhhc-------cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          226 FVARNA-------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       226 ~~~~~~-------~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ...+..       .....+++++|+|+++++++....   .|+++++.+|..
T Consensus       362 ~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~  410 (508)
T 4f6l_B          362 DLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNK  410 (508)
T ss_dssp             HHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCE
T ss_pred             HHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCC
Confidence            111100       011357889999999999997543   789999988764

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.80  E-value=7e-20  Score=157.79  Aligned_cols=200  Identities=15%  Similarity=0.030  Sum_probs=145.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +++||||+|+||+++++.|+ +|++|++++|+..                ++.+|+++.+++.++++..     ++|++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------~~~~D~~d~~~~~~~~~~~-----~~d~vi   59 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------EFCGDFSNPKGVAETVRKL-----RPDVIV   59 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------SSCCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------cccccCCCHHHHHHHHHhc-----CCCEEE
Confidence            69999999999999999999 8999999999762                2468999999988777643     799999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC-----------CCccc
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-----------GPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~-----------~~~~Y  168 (280)
                      |+||....      ..+.+++++.+++|+.+..++++++..    .+ .++|++||.+...+..           +...|
T Consensus        60 h~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  128 (299)
T 1n2s_A           60 NAAAHTAV------DKAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (299)
T ss_dssp             ECCCCCCH------HHHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             ECcccCCH------hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHH
Confidence            99986532      112245678899999999999998854    22 4899999986643321           25689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc------CCCCCCCHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN------MQGTELTAND  242 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~d  242 (280)
                      +.+|++.+.+++.++.       +++.+.|+.+.++......+          .+.....+...      ....++.++|
T Consensus       129 ~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~i~v~D  191 (299)
T 1n2s_A          129 GKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAK----------TMLRLAKERQTLSVINDQYGAPTGAEL  191 (299)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHH----------HHHHHHHHCSEEEEECSCEECCEEHHH
T ss_pred             HHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHH----------HHHHHHhcCCCEEeecCcccCCeeHHH
Confidence            9999999999887632       78999999999886431100          01111111110      1245678999


Q ss_pred             HHHHHHHhcCCCCCce-eecEEEeCCCc
Q 023553          243 VANAVLFLASDEARYI-SGTNLMVDGGF  269 (280)
Q Consensus       243 va~~i~~l~s~~~~~~-~G~~i~~dgG~  269 (280)
                      +|++++.++....... .|+.+++.+|.
T Consensus       192 va~~~~~~~~~~~~~~~~~~~~~i~~~~  219 (299)
T 1n2s_A          192 LADCTAHAIRVALNKPEVAGLYHLVAGG  219 (299)
T ss_dssp             HHHHHHHHHHHHHHCGGGCEEEECCCBS
T ss_pred             HHHHHHHHHHHhccccccCceEEEeCCC
Confidence            9999999986432122 57899998875

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.79  E-value=8e-19  Score=150.09  Aligned_cols=196  Identities=12%  Similarity=0.077  Sum_probs=137.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           20 VALITGGATGIGESTVRLFHKH--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +++||||+|+||+++++.|+++  |++|++++|+.+..+.+..     ..+.++.+|++|++++.++++       ++|+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~-------~~d~   68 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-----QGITVRQADYGDEAALTSALQ-------GVEK   68 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-----TTCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-----CCCeEEEcCCCCHHHHHHHHh-------CCCE
Confidence            4899999999999999999998  9999999998776554332     246788999999988776654       7899


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +||+||..    .              ..|+.+..++++++..    .+.++||++||..+.   +....|+.+|.+.+.
T Consensus        69 vi~~a~~~----~--------------~~~~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~  123 (286)
T 2zcu_A           69 LLLISSSE----V--------------GQRAPQHRNVINAAKA----AGVKFIAYTSLLHAD---TSPLGLADEHIETEK  123 (286)
T ss_dssp             EEECC--------------------------CHHHHHHHHHHH----HTCCEEEEEEETTTT---TCCSTTHHHHHHHHH
T ss_pred             EEEeCCCC----c--------------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC---CCcchhHHHHHHHHH
Confidence            99999852    1              0256666666666544    345799999998775   233589999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCc
Q 023553          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~  257 (280)
                      +++.       .|++++.+.||++.++... ...  ...    . ...+..........+++++|+|++++.+++...  
T Consensus       124 ~~~~-------~~~~~~ilrp~~~~~~~~~-~~~--~~~----~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--  186 (286)
T 2zcu_A          124 MLAD-------SGIVYTLLRNGWYSENYLA-SAP--AAL----E-HGVFIGAAGDGKIASATRADYAAAAARVISEAG--  186 (286)
T ss_dssp             HHHH-------HCSEEEEEEECCBHHHHHT-THH--HHH----H-HTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--
T ss_pred             HHHH-------cCCCeEEEeChHHhhhhHH-HhH--Hhh----c-CCceeccCCCCccccccHHHHHHHHHHHhcCCC--
Confidence            8864       4799999999988766421 000  000    0 000000000112568899999999999997532  


Q ss_pred             eeecEEEeCCCc
Q 023553          258 ISGTNLMVDGGF  269 (280)
Q Consensus       258 ~~G~~i~~dgG~  269 (280)
                      .+|+.++++||.
T Consensus       187 ~~g~~~~i~~~~  198 (286)
T 2zcu_A          187 HEGKVYELAGDS  198 (286)
T ss_dssp             CTTCEEEECCSS
T ss_pred             CCCceEEEeCCC
Confidence            478999999984

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.78  E-value=2.3e-19  Score=153.75  Aligned_cols=203  Identities=13%  Similarity=0.029  Sum_probs=145.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      ++++|||| +|+||+++++.|+++|++|++++|+.+..         ...+.++.+|+++.+++.++++      +++|+
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~------~~~d~   66 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------PAGVQTLIADVTRPDTLASIVH------LRPEI   66 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------CTTCCEEECCTTCGGGCTTGGG------GCCSE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------ccCCceEEccCCChHHHHHhhc------CCCCE
Confidence            57899999 59999999999999999999999987652         2467788999999988766554      36999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCc
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPH  166 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----------~~~~  166 (280)
                      +||+|+...           .+....+++|+.+..++++++.    +.+.++||++||.+.....           .+..
T Consensus        67 vih~a~~~~-----------~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~  131 (286)
T 3gpi_A           67 LVYCVAASE-----------YSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKD  131 (286)
T ss_dssp             EEECHHHHH-----------HC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCS
T ss_pred             EEEeCCCCC-----------CCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCC
Confidence            999998531           3456788999999988877764    3445799999997654322           1356


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHH-HHhhhccCCCCCCCHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRN-FVARNANMQGTELTANDVAN  245 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~  245 (280)
                      .|+.+|.+.+.+ +..        ++++.+.|+.+.++........          ... ...........++.++|+|+
T Consensus       132 ~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~----------~~~~~~~~~~~~~~~~i~v~Dva~  192 (286)
T 3gpi_A          132 FSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQ----------AQTPEQWPARNAWTNRIHRDDGAA  192 (286)
T ss_dssp             HHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHH----------TTCGGGSCSSBCEECEEEHHHHHH
T ss_pred             hhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHH----------HHhcccCCCcCceeEEEEHHHHHH
Confidence            899999999888 542        7899999999988764311000          000 00011112256889999999


Q ss_pred             HHHHhcCCCCCceeecEEEeCCCcc
Q 023553          246 AVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       246 ~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++.++........|+++++.+|..
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~  217 (286)
T 3gpi_A          193 FIAYLIQQRSHAVPERLYIVTDNQP  217 (286)
T ss_dssp             HHHHHHHHHTTSCCCSEEEECCSCC
T ss_pred             HHHHHHhhhccCCCCceEEEeCCCC
Confidence            9999997532245689999988753

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.77  E-value=2.1e-18  Score=152.42  Aligned_cols=212  Identities=13%  Similarity=0.058  Sum_probs=140.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecC-CCCHHHHHHHHHHHHHHhCCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD-VTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ++++++||||+|+||+++++.|+++|++|++++|+.+....  +.+.....+.++.+| ++|++++.++++       ++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l~~~~~v~~v~~D~l~d~~~l~~~~~-------~~   74 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAIPNVTLFQGPLLNNVPLMDTLFE-------GA   74 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTSTTEEEEESCCTTCHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHHhhcCCcEEEECCccCCHHHHHHHHh-------cC
Confidence            46889999999999999999999999999999998775421  112122357788999 999998876655       78


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEcccc-ccccCCCCccchhhHH
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVA-GAIGGLGPHAYTGSKH  173 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~-~~~~~~~~~~Y~~sK~  173 (280)
                      |++|||++....                 +.|..+ .++++++.    +.+ -++||++||.. +..+.+....|+.+|+
T Consensus        75 d~Vi~~a~~~~~-----------------~~~~~~-~~l~~aa~----~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~  132 (352)
T 1xgk_A           75 HLAFINTTSQAG-----------------DEIAIG-KDLADAAK----RAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKF  132 (352)
T ss_dssp             SEEEECCCSTTS-----------------CHHHHH-HHHHHHHH----HHSCCSEEEEEECCCGGGTSSCCCCTTTHHHH
T ss_pred             CEEEEcCCCCCc-----------------HHHHHH-HHHHHHHH----HcCCccEEEEeCCccccccCCCCCccHHHHHH
Confidence            999999874310                 224444 44444443    344 57999999987 3444455678999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc---chhhhhhhhhhHHHHhhhccCCCCCCCH-HHHHHHHHH
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE---EERTEDAMVGFRNFVARNANMQGTELTA-NDVANAVLF  249 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dva~~i~~  249 (280)
                      +.+.+++.+       |++++.+.||++.+.......+.   ......... . ..... ......++++ +|+|++++.
T Consensus       133 ~~E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~-~-~~~~~-~~~~~~~i~v~~Dva~ai~~  202 (352)
T 1xgk_A          133 TVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFE-W-HAPFD-PDIPLPWLDAEHDVGPALLQ  202 (352)
T ss_dssp             HHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEE-E-EESSC-TTSCEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceE-E-eeccC-CCCceeeEecHHHHHHHHHH
Confidence            999988752       79999999997654432211000   000000000 0 00000 0001246788 899999999


Q ss_pred             hcCCCCCceeecEEEeCCCc
Q 023553          250 LASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++........|+++.+.++.
T Consensus       203 ~l~~~~~~~~g~~~~l~~~~  222 (352)
T 1xgk_A          203 IFKDGPQKWNGHRIALTFET  222 (352)
T ss_dssp             HHHHCHHHHTTCEEEECSEE
T ss_pred             HHhCCchhhCCeEEEEecCC
Confidence            99643224568899998764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.77  E-value=3.6e-18  Score=147.26  Aligned_cols=211  Identities=13%  Similarity=0.041  Sum_probs=138.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|+++||||+|+||+++++.|+++| ++|++++|+.+.....  .+. ...+.++.+|++|++++.++++       ++|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~--~l~-~~~~~~~~~D~~d~~~l~~~~~-------~~d   74 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAK--ELR-LQGAEVVQGDQDDQVIMELALN-------GAY   74 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHH--HHH-HTTCEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHH--HHH-HCCCEEEEecCCCHHHHHHHHh-------cCC
Confidence            5899999999999999999999999 9999999987654211  111 1246788999999998876665       799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc--cCCCCccchhhHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI--GGLGPHAYTGSKHA  174 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~--~~~~~~~Y~~sK~a  174 (280)
                      ++||+++....  .            ..+.|+.+...++++    +++.+.++||++|+.....  +......|..+|++
T Consensus        75 ~vi~~a~~~~~--~------------~~~~~~~~~~~~~~a----a~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~  136 (299)
T 2wm3_A           75 ATFIVTNYWES--C------------SQEQEVKQGKLLADL----ARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGE  136 (299)
T ss_dssp             EEEECCCHHHH--T------------CHHHHHHHHHHHHHH----HHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHH
T ss_pred             EEEEeCCCCcc--c------------cchHHHHHHHHHHHH----HHHcCCCEEEEEcCccccccCCCcccCchhhHHHH
Confidence            99999985321  0            123344444444444    4444567999966543221  11224689999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      ++.+.+.       .|++++.+.||++.++......+..... .. . . .+..........+++++|+|+++..++...
T Consensus       137 ~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~-g~-~-~-~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  205 (299)
T 2wm3_A          137 VEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPD-GK-S-Y-LLSLPTGDVPMDGMSVSDLGPVVLSLLKMP  205 (299)
T ss_dssp             HHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTT-SS-S-E-EECCCCTTSCEEEECGGGHHHHHHHHHHSH
T ss_pred             HHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCC-CC-E-E-EEEecCCCCccceecHHHHHHHHHHHHcCh
Confidence            9988764       3799999999999988654222211000 00 0 0 000000001135789999999999998642


Q ss_pred             CCceeecEEEeCCC
Q 023553          255 ARYISGTNLMVDGG  268 (280)
Q Consensus       255 ~~~~~G~~i~~dgG  268 (280)
                      . ...|+.+.++|.
T Consensus       206 ~-~~~g~~~~~~g~  218 (299)
T 2wm3_A          206 E-KYVGQNIGLSTC  218 (299)
T ss_dssp             H-HHTTCEEECCSE
T ss_pred             h-hhCCeEEEeeec
Confidence            1 236888998864

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.74  E-value=5.4e-17  Score=139.11  Aligned_cols=193  Identities=15%  Similarity=0.105  Sum_probs=130.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           20 VALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      ++|||||+|+||+++++.|.+. |++|+++.|+.+....+.     ...+.++.+|++|++++.++++       ++|++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-----~~~v~~~~~D~~d~~~l~~~~~-------~~d~v   69 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-----RGKVSVRQLDYFNQESMVEAFK-------GMDTV   69 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-----BTTBEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-----hCCCEEEEcCCCCHHHHHHHHh-------CCCEE
Confidence            5999999999999999999998 999999999987643321     2367889999999988776654       89999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      ||+||....  .              ..|+.+...+++    .+++.+-++||++||.....    ..+|..++...   
T Consensus        70 i~~a~~~~~--~--------------~~~~~~~~~l~~----aa~~~gv~~iv~~Ss~~~~~----~~~~~~~~~~~---  122 (289)
T 3e48_A           70 VFIPSIIHP--S--------------FKRIPEVENLVY----AAKQSGVAHIIFIGYYADQH----NNPFHMSPYFG---  122 (289)
T ss_dssp             EECCCCCCS--H--------------HHHHHHHHHHHH----HHHHTTCCEEEEEEESCCST----TCCSTTHHHHH---
T ss_pred             EEeCCCCcc--c--------------hhhHHHHHHHHH----HHHHcCCCEEEEEcccCCCC----CCCCccchhHH---
Confidence            999986532  0              124555444444    44445567999999965432    23344444321   


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc--cCCC----CCCCHHHHHHHHHHhcC
Q 023553          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA--NMQG----TELTANDVANAVLFLAS  252 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~dva~~i~~l~s  252 (280)
                        .+...+...|++++.+.||++.+++...              ...+..+..  .+.+    .+++++|+|++++.++.
T Consensus       123 --~~e~~~~~~g~~~~ilrp~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~  186 (289)
T 3e48_A          123 --YASRLLSTSGIDYTYVRMAMYMDPLKPY--------------LPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIK  186 (289)
T ss_dssp             --HHHHHHHHHCCEEEEEEECEESTTHHHH--------------HHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHcCCCEEEEeccccccccHHH--------------HHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHc
Confidence              2223334468999999999998874311              011111111  1112    37899999999999997


Q ss_pred             CCCCceeecEEEeCCCcc
Q 023553          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      .....  |++++++ |..
T Consensus       187 ~~~~~--g~~~~~~-~~~  201 (289)
T 3e48_A          187 NPDTW--GKRYLLS-GYS  201 (289)
T ss_dssp             CGGGT--TCEEEEC-CEE
T ss_pred             CCCcC--CceEEeC-CCc
Confidence            65433  8899998 543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.74  E-value=2.1e-17  Score=141.37  Aligned_cols=195  Identities=6%  Similarity=-0.104  Sum_probs=136.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .++++|||| |.||+++++.|+++|++|++++|+......+..     ..+.++.+|+++.+            +.++|+
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~------------~~~~d~   66 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-----SGAEPLLWPGEEPS------------LDGVTH   66 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-----TTEEEEESSSSCCC------------CTTCCE
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-----CCCeEEEecccccc------------cCCCCE
Confidence            378999998 999999999999999999999999887655433     35788999999832            458999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhccc--CCCceEEEEccccccccC-----------CC
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP--QTKGTIISICSVAGAIGG-----------LG  164 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~g~iv~isS~~~~~~~-----------~~  164 (280)
                      +||+|+....  .     .  ..              .+.++..+.+  .+-.+||++||.......           .+
T Consensus        67 vi~~a~~~~~--~-----~--~~--------------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p  123 (286)
T 3ius_A           67 LLISTAPDSG--G-----D--PV--------------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTP  123 (286)
T ss_dssp             EEECCCCBTT--B-----C--HH--------------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCC
T ss_pred             EEECCCcccc--c-----c--HH--------------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCC
Confidence            9999987533  1     1  10              1233333333  344799999997654321           12


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ...|+.+|.+.+.+++.+      .|+++..+.|+.+.++...........       .... .........++.++|+|
T Consensus       124 ~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~-------~~~~-~~~~~~~~~~i~v~Dva  189 (286)
T 3ius_A          124 TAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKG-------GIRR-IIKPGQVFSRIHVEDIA  189 (286)
T ss_dssp             CSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSS-------CCCE-EECTTCCBCEEEHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcC-------Cccc-cCCCCcccceEEHHHHH
Confidence            457999999999998876      589999999999998864321110000       0000 00001125678999999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          245 NAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++++.++....   .|+.+++.+|..
T Consensus       190 ~a~~~~~~~~~---~g~~~~i~~~~~  212 (286)
T 3ius_A          190 QVLAASMARPD---PGAVYNVCDDEP  212 (286)
T ss_dssp             HHHHHHHHSCC---TTCEEEECCSCC
T ss_pred             HHHHHHHhCCC---CCCEEEEeCCCC
Confidence            99999997644   688999988764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.72  E-value=2e-17  Score=146.77  Aligned_cols=192  Identities=21%  Similarity=0.143  Sum_probs=140.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      +++||||+|+||+++++.|++.|+ .|+..+|+                        ++++++.++++       ++|++
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------~d~~~l~~~~~-------~~d~V   50 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------TKEEELESALL-------KADFI   50 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------CCHHHHHHHHH-------HCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------CCHHHHHHHhc-------cCCEE
Confidence            699999999999999999999998 67666554                        67888777766       69999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCC-ceEEEEccccccccCCCCccchhhHHHHHH
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      ||+||....          +++...+++|+.+..++++++..    .+. .++|++||.....    ...|+.+|++.+.
T Consensus        51 ih~a~~~~~----------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~  112 (369)
T 3st7_A           51 VHLAGVNRP----------EHDKEFSLGNVSYLDHVLDILTR----NTKKPAILLSSSIQATQ----DNPYGESKLQGEQ  112 (369)
T ss_dssp             EECCCSBCT----------TCSTTCSSSCCBHHHHHHHHHTT----CSSCCEEEEEEEGGGGS----CSHHHHHHHHHHH
T ss_pred             EECCcCCCC----------CCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCchhhcC----CCCchHHHHHHHH
Confidence            999997643          13355688999999988888743    333 3899999987754    6799999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccC-------CCCCCCHHHHHHHHHHh
Q 023553          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-------QGTELTANDVANAVLFL  250 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~i~~l  250 (280)
                      +++.++++.   |+++..+.|+.+..+........  .    ...+.....+...+       ...++.++|+|++++.+
T Consensus       113 ~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  183 (369)
T 3st7_A          113 LLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNS--V----IATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRA  183 (369)
T ss_dssp             HHHHHHHHH---CCCEEEEEECEEECTTCCTTSSC--H----HHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHh---CCCEEEEECCceeCCCCCCCcch--H----HHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHH
Confidence            999998884   68999999999998865432111  0    01111111111111       13567899999999999


Q ss_pred             cCCCCCceeecEEEeCCCcc
Q 023553          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +..... ..|+++++.+|..
T Consensus       184 l~~~~~-~~~~~~~i~~~~~  202 (369)
T 3st7_A          184 IEGTPT-IENGVPTVPNVFK  202 (369)
T ss_dssp             HHTCCC-EETTEECCSCCEE
T ss_pred             HhCCcc-cCCceEEeCCCCc
Confidence            975432 2488899888743

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.69  E-value=2.5e-16  Score=135.93  Aligned_cols=199  Identities=15%  Similarity=0.121  Sum_probs=129.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-------chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-------NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++++||||+|+||+++++.|++.|++|++++|+.       ++.+.+ +.+. ...+.++.+|++|++++.++++    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~-~~~v~~v~~D~~d~~~l~~~~~----   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQ-SLGVILLEGDINDHETLVKAIK----   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHH-HTTCEEEECCTTCHHHHHHHHT----
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHH-hCCCEEEEeCCCCHHHHHHHHh----
Confidence            57899999999999999999999999999999986       333322 2221 1246788999999988876665    


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccc------cCC
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAI------GGL  163 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~------~~~  163 (280)
                         ++|++||++|...                     +.+...+++++..    .+ -.+||  .|..+..      ..+
T Consensus        76 ---~~d~vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v--~S~~g~~~~~~~~~~p  125 (307)
T 2gas_A           76 ---QVDIVICAAGRLL---------------------IEDQVKIIKAIKE----AGNVKKFF--PSEFGLDVDRHDAVEP  125 (307)
T ss_dssp             ---TCSEEEECSSSSC---------------------GGGHHHHHHHHHH----HCCCSEEE--CSCCSSCTTSCCCCTT
T ss_pred             ---CCCEEEECCcccc---------------------cccHHHHHHHHHh----cCCceEEe--ecccccCcccccCCCc
Confidence               7999999998631                     2344455555433    33 46776  3444421      122


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcc--hhhhhhhhhhHHHHhhhccCCCCCCCHH
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE--ERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      ....| .+|++++.+.+.       .|++++.+.||++.+.+........  ......   .. . .........+++++
T Consensus       126 ~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~~~~~~~i~~~  192 (307)
T 2gas_A          126 VRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDK---VV-I-LGDGNVKGAYVTEA  192 (307)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSE---EE-E-ETTSCSEEEEECHH
T ss_pred             chhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCe---EE-E-ecCCCcceEEeeHH
Confidence            24578 999999887753       3789999999999886543221100  000000   00 0 00000114578999


Q ss_pred             HHHHHHHHhcCCCCCceeecEEEeCC
Q 023553          242 DVANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       242 dva~~i~~l~s~~~~~~~G~~i~~dg  267 (280)
                      |+|++++.++....  ..|+.+.+.|
T Consensus       193 Dva~~~~~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          193 DVGTFTIRAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHHHHHHHHTCGG--GTTEEEECCC
T ss_pred             HHHHHHHHHHcCcc--ccCceEEEeC
Confidence            99999999996532  3467777764

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.68  E-value=1.2e-15  Score=134.61  Aligned_cols=216  Identities=13%  Similarity=0.044  Sum_probs=142.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC-----CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           18 GRVALITGGATGIGESTVRLFHKHG-----AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g-----~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +|+++||||+|+||++++++|+++|     ++|++++|+.....     . ....+.++.+|+++.+++.++++..    
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~-~~~~~~~~~~Dl~d~~~~~~~~~~~----   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H-EDNPINYVQCDISDPDDSQAKLSPL----   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C-CSSCCEEEECCTTSHHHHHHHHTTC----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c-ccCceEEEEeecCCHHHHHHHHhcC----
Confidence            5789999999999999999999999     99999999876432     1 1246778899999999877666522    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEE-------EEccccccccC---
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTII-------SICSVAGAIGG---  162 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv-------~isS~~~~~~~---  162 (280)
                      +++|++||+||...           ++..+.+++|+.+..++++++.+..  .+-.++|       ++||.+.....   
T Consensus        71 ~~~d~vih~a~~~~-----------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~~~~  137 (364)
T 2v6g_A           71 TDVTHVFYVTWANR-----------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKIESH  137 (364)
T ss_dssp             TTCCEEEECCCCCC-----------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTSCCC
T ss_pred             CCCCEEEECCCCCc-----------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccccccC
Confidence            24999999998642           2367889999999999999987642  1234676       68876543211   


Q ss_pred             -----------CCCccchhhHHHHHHHHHHHHHHHCCCC-eEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHH--h
Q 023553          163 -----------LGPHAYTGSKHAVLGLNKNVAAELGKYG-IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV--A  228 (280)
Q Consensus       163 -----------~~~~~Y~~sK~al~~~~~~la~e~~~~g-i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~  228 (280)
                                 +....|    .+.+.+++.++   ..+| +++..+.|+.+..+....... .....   .-...+.  .
T Consensus       138 ~~~~~E~~~~~~~~~~y----~~~E~~~~~~~---~~~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~---~~~~~~~~~~  206 (364)
T 2v6g_A          138 DPPYTEDLPRLKYMNFY----YDLEDIMLEEV---EKKEGLTWSVHRPGNIFGFSPYSMMN-LVGTL---CVYAAICKHE  206 (364)
T ss_dssp             CSSBCTTSCCCSSCCHH----HHHHHHHHHHH---TTSTTCEEEEEEESSEECCCTTCSSC-HHHHH---HHHHHHHHHH
T ss_pred             CCCCCccccCCccchhh----HHHHHHHHHHh---hcCCCceEEEECCCceeCCCCCcccc-hHHHH---HHHHHHHHhc
Confidence                       112345    23444444433   2255 999999999999886542211 00000   0001110  1


Q ss_pred             hhc-cCC---------CCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          229 RNA-NMQ---------GTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       229 ~~~-~~~---------~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ... ...         -.+.+++|+|++++.++...  ...|+++++.+|.
T Consensus       207 g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~  255 (364)
T 2v6g_A          207 GKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGD  255 (364)
T ss_dssp             TCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSC
T ss_pred             CCceecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCC
Confidence            111 101         24455689999999998643  2468899998875

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.65  E-value=3.1e-15  Score=131.52  Aligned_cols=204  Identities=13%  Similarity=0.081  Sum_probs=134.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc----chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD----NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++++||||+|+||+++++.|++.|+.|+++.|+.    ++.+.. +.+. ...+.++.+|++|.+++.+++++.     
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~-~~~v~~~~~Dl~d~~~l~~~~~~~-----   82 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIF-KALE-DKGAIIVYGLINEQEAMEKILKEH-----   82 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-HHHH-HTTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHH-HHHH-hCCcEEEEeecCCHHHHHHHHhhC-----
Confidence            57899999999999999999999999999999986    222221 1221 136788999999999988777642     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-----cCCCCccc
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----GGLGPHAY  168 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-----~~~~~~~Y  168 (280)
                      ++|+|||+++.                     .|+.+..++++++...-   .-.+|++ |+ .+..     +.+....|
T Consensus        83 ~~d~Vi~~a~~---------------------~n~~~~~~l~~aa~~~g---~v~~~v~-S~-~g~~~~e~~~~~p~~~y  136 (346)
T 3i6i_A           83 EIDIVVSTVGG---------------------ESILDQIALVKAMKAVG---TIKRFLP-SE-FGHDVNRADPVEPGLNM  136 (346)
T ss_dssp             TCCEEEECCCG---------------------GGGGGHHHHHHHHHHHC---CCSEEEC-SC-CSSCTTTCCCCTTHHHH
T ss_pred             CCCEEEECCch---------------------hhHHHHHHHHHHHHHcC---CceEEee-cc-cCCCCCccCcCCCcchH
Confidence            89999999975                     17778888888776531   1346664 43 3322     12345689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ..+|.+.+.+.+.       .|+.+..+.||++.................  ...... .........+++++|+|++++
T Consensus       137 ~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~--~~~~~~-~g~g~~~~~~i~~~Dva~~~~  206 (346)
T 3i6i_A          137 YREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPP--TDFFQI-YGDGNVKAYFVAGTDIGKFTM  206 (346)
T ss_dssp             HHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCC--SSCEEE-ETTSCCCEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCC--CceEEE-ccCCCceEEecCHHHHHHHHH
Confidence            9999998887764       579999999999877543221110000000  000000 000111246889999999999


Q ss_pred             HhcCCCCCceeecEEEeC
Q 023553          249 FLASDEARYISGTNLMVD  266 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~d  266 (280)
                      .++...  ...|+.+.+.
T Consensus       207 ~~l~~~--~~~~~~~~i~  222 (346)
T 3i6i_A          207 KTVDDV--RTLNKSVHFR  222 (346)
T ss_dssp             HHTTCG--GGTTEEEECC
T ss_pred             HHHhCc--cccCeEEEEe
Confidence            999653  2336667665

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.65  E-value=1.8e-15  Score=130.92  Aligned_cols=203  Identities=13%  Similarity=0.090  Sum_probs=132.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-----hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-----LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++||||+|+||+++++.|++.|++|++++|+..     ..+.+ +.+. ...+.++.+|++|++++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~-~~~~~~~~~D~~d~~~l~~~~~------   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK-QLGAKLIEASLDDHQRLVDALK------   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH-TTTCEEECCCSSCHHHHHHHHT------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH-hCCeEEEeCCCCCHHHHHHHHh------
Confidence            467999999999999999999999999999999843     22222 2221 2357788999999998876665      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEcccccccc-------CCC
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIG-------GLG  164 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~-------~~~  164 (280)
                       ++|++||+++....  .               .|+.+..++++++..    .+ -.+||+  |..+...       .+.
T Consensus        76 -~~d~vi~~a~~~~~--~---------------~~~~~~~~l~~aa~~----~g~v~~~v~--S~~g~~~~~~~~~~~p~  131 (313)
T 1qyd_A           76 -QVDVVISALAGGVL--S---------------HHILEQLKLVEAIKE----AGNIKRFLP--SEFGMDPDIMEHALQPG  131 (313)
T ss_dssp             -TCSEEEECCCCSSS--S---------------TTTTTHHHHHHHHHH----SCCCSEEEC--SCCSSCTTSCCCCCSST
T ss_pred             -CCCEEEECCccccc--h---------------hhHHHHHHHHHHHHh----cCCCceEEe--cCCcCCccccccCCCCC
Confidence             79999999987532  1               256666666666543    43 467874  4333211       133


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcc---hhhhhhhhhhHHHHhhhccCCCCCCCHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE---ERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      ...| .+|++++.+.+.       .|+++..+.||++.+..........   ......   .. . .........+++++
T Consensus       132 ~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~g~~~~~~i~~~  198 (313)
T 1qyd_A          132 SITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDK---VL-I-YGDGNVKGIWVDED  198 (313)
T ss_dssp             THHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSE---EC-C-BTTSCSEEEEECHH
T ss_pred             cchH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCe---EE-E-eCCCCceEEEEEHH
Confidence            4578 999998887752       4788999999998765432211100   000000   00 0 00000113578999


Q ss_pred             HHHHHHHHhcCCCCCceeecEEEeCC
Q 023553          242 DVANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       242 dva~~i~~l~s~~~~~~~G~~i~~dg  267 (280)
                      |+|+++..++....  ..|+.+.+.|
T Consensus       199 Dva~~~~~~l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          199 DVGTYTIKSIDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             HHHHHHHHHTTCGG--GSSSEEECCC
T ss_pred             HHHHHHHHHHhCcc--cCCceEEEeC
Confidence            99999999996532  2467777765

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.64  E-value=2.1e-15  Score=139.75  Aligned_cols=204  Identities=15%  Similarity=0.022  Sum_probs=138.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +++||||||+|.||+++++.|++.|++|++++|+....+             .+.+|+.+..         .+.+.++|+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~-------------~v~~d~~~~~---------~~~l~~~D~  204 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG-------------KRFWDPLNPA---------SDLLDGADV  204 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT-------------CEECCTTSCC---------TTTTTTCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc-------------ceeecccchh---------HHhcCCCCE
Confidence            679999999999999999999999999999999876421             2556776431         223358999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCc
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPH  166 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-----------~~~~~  166 (280)
                      |||+||....  .   ..+.+.....+++|+.+..++++++..   ..+..+||++||......           ..+..
T Consensus       205 Vih~A~~~~~--~---~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~  276 (516)
T 3oh8_A          205 LVHLAGEPIF--G---RFNDSHKEAIRESRVLPTKFLAELVAE---STQCTTMISASAVGFYGHDRGDEILTEESESGDD  276 (516)
T ss_dssp             EEECCCC----------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSS
T ss_pred             EEECCCCccc--c---ccchhHHHHHHHHHHHHHHHHHHHHHh---cCCCCEEEEeCcceEecCCCCCCccCCCCCCCcC
Confidence            9999997532  1   455667888999999999999997543   244569999999765431           11334


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHH-hhhcc------CCCCCCC
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV-ARNAN------MQGTELT  239 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~  239 (280)
                      .|+.+|...+.+.+.    ....|++++.+.||.+.++... ..          ..+.... .....      ....++.
T Consensus       277 ~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~~-~~----------~~~~~~~~~g~~~~~g~g~~~~~~i~  341 (516)
T 3oh8_A          277 FLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRGG-ML----------PLLKTLFSTGLGGKFGDGTSWFSWIA  341 (516)
T ss_dssp             HHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTBS-HH----------HHHHHTTC---CCCCTTSCCEECEEE
T ss_pred             hHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCCC-hH----------HHHHHHHHhCCCcccCCCCceEceEe
Confidence            677777776665433    3346899999999999987521 00          0000000 00001      1136788


Q ss_pred             HHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          240 ANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       240 ~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++|+|++++.++....  ..| .+++.+|.
T Consensus       342 v~Dva~ai~~~l~~~~--~~g-~~ni~~~~  368 (516)
T 3oh8_A          342 IDDLTDIYYRAIVDAQ--ISG-PINAVAPN  368 (516)
T ss_dssp             HHHHHHHHHHHHHCTT--CCE-EEEESCSC
T ss_pred             HHHHHHHHHHHHhCcc--cCC-cEEEECCC
Confidence            9999999999996533  344 56666653

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.62  E-value=9.8e-16  Score=133.18  Aligned_cols=199  Identities=13%  Similarity=0.049  Sum_probs=126.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc------chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD------NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++++||||+|+||+++++.|++.|++|++++|+.      +..+.+ +.+. ...+.++.+|++|++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l-~~~~-~~~v~~v~~D~~d~~~l~~a~~-----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLR-EEFR-SMGVTIIEGEMEEHEKMVSVLK-----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHH-HHHH-HTTCEEEECCTTCHHHHHHHHT-----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHH-HHhh-cCCcEEEEecCCCHHHHHHHHc-----
Confidence            46799999999999999999999999999999986      222222 1121 1357788999999998877665     


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEcccccccc---C---CC
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIG---G---LG  164 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~---~---~~  164 (280)
                        ++|++||+++...                     +.+...+++++..    .+ -++||  .|..+...   .   +.
T Consensus        77 --~~d~vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v--~S~~g~~~~~~~~~~p~  127 (321)
T 3c1o_A           77 --QVDIVISALPFPM---------------------ISSQIHIINAIKA----AGNIKRFL--PSDFGCEEDRIKPLPPF  127 (321)
T ss_dssp             --TCSEEEECCCGGG---------------------SGGGHHHHHHHHH----HCCCCEEE--CSCCSSCGGGCCCCHHH
T ss_pred             --CCCEEEECCCccc---------------------hhhHHHHHHHHHH----hCCccEEe--ccccccCccccccCCCc
Confidence              7999999998531                     3334444444433    33 45777  34444211   1   12


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCc--chhhhhhhhhhHHHHhhhccCCCCCCCHHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE--EERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      ...| .+|++++.+.+.       .|+++..+.||++.+.........  .......   .. . .........+++++|
T Consensus       128 ~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~~~~~~~i~~~D  194 (321)
T 3c1o_A          128 ESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDD---IV-I-YGTGETKFVLNYEED  194 (321)
T ss_dssp             HHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSC---EE-E-ETTSCCEEEEECHHH
T ss_pred             chHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCc---eE-E-ecCCCcceeEeeHHH
Confidence            3578 999999988763       368888899998866532110000  0000000   00 0 000011145789999


Q ss_pred             HHHHHHHhcCCCCCceeecEEEeCC
Q 023553          243 VANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       243 va~~i~~l~s~~~~~~~G~~i~~dg  267 (280)
                      +|+++..++....  ..|+.+.+.|
T Consensus       195 va~~~~~~l~~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          195 IAKYTIKVACDPR--CCNRIVIYRP  217 (321)
T ss_dssp             HHHHHHHHHHCGG--GTTEEEECCC
T ss_pred             HHHHHHHHHhCcc--ccCeEEEEeC
Confidence            9999999996532  2477788775

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.61  E-value=4.4e-16  Score=135.24  Aligned_cols=199  Identities=12%  Similarity=0.082  Sum_probs=124.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .|+++||||+|+||+++++.|++.|++|++++|+.....+..+.+. ...+.++.+|++|++++.++++       ++|+
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~a~~-------~~d~   82 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ-SLGAIIVKGELDEHEKLVELMK-------KVDV   82 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHH-HTTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhh-cCCCEEEEecCCCHHHHHHHHc-------CCCE
Confidence            4689999999999999999999999999999998752222212121 1246788999999998877665       7999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccC------CCCccchh
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGG------LGPHAYTG  170 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~------~~~~~Y~~  170 (280)
                      |||+++...                     +.+...+++++..    .+ -.+||+  |..+....      +....| .
T Consensus        83 vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v~--S~~g~~~~~~~~~~p~~~~y-~  134 (318)
T 2r6j_A           83 VISALAFPQ---------------------ILDQFKILEAIKV----AGNIKRFLP--SDFGVEEDRINALPPFEALI-E  134 (318)
T ss_dssp             EEECCCGGG---------------------STTHHHHHHHHHH----HCCCCEEEC--SCCSSCTTTCCCCHHHHHHH-H
T ss_pred             EEECCchhh---------------------hHHHHHHHHHHHh----cCCCCEEEe--eccccCcccccCCCCcchhH-H
Confidence            999998531                     2233444444433    33 457774  43332111      123468 9


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|++++.+.+.       .|+.+..+.||++............ .....   . .. .........+++++|+|+++..+
T Consensus       135 sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~-~~~~~---~-~~-~~~~~~~~~~i~~~Dva~~~~~~  201 (318)
T 2r6j_A          135 RKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPY-DPKDE---I-TV-YGTGEAKFAMNYEQDIGLYTIKV  201 (318)
T ss_dssp             HHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTT-CCCSE---E-EE-ETTSCCEEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhcccc-CCCCc---e-EE-ecCCCceeeEeeHHHHHHHHHHH
Confidence            99998887753       4788889999987654321100000 00000   0 00 00000114578999999999999


Q ss_pred             cCCCCCceeecEEEeCC
Q 023553          251 ASDEARYISGTNLMVDG  267 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dg  267 (280)
                      +....  ..|+.+.+.|
T Consensus       202 l~~~~--~~~~~~~~~g  216 (318)
T 2r6j_A          202 ATDPR--ALNRVVIYRP  216 (318)
T ss_dssp             TTCGG--GTTEEEECCC
T ss_pred             hcCcc--ccCeEEEecC
Confidence            97532  2366777654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.60  E-value=4.2e-15  Score=128.27  Aligned_cols=200  Identities=14%  Similarity=0.115  Sum_probs=126.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-----HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-----QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++||||+|+||+++++.|++.|+.|+++.|+....     .+..+.+. ...+.++.+|++|++++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH-hCCCEEEEeccCCHHHHHHHHc------
Confidence            46899999999999999999999999999999985321     11112221 2357788999999998877766      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEcccccccc------CCCC
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIG------GLGP  165 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~------~~~~  165 (280)
                       ++|++||+++...                     +.+...+++++..    .+ -.+||+  |..+...      .+..
T Consensus        77 -~~d~vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v~--S~~g~~~~~~~~~~p~~  128 (308)
T 1qyc_A           77 -NVDVVISTVGSLQ---------------------IESQVNIIKAIKE----VGTVKRFFP--SEFGNDVDNVHAVEPAK  128 (308)
T ss_dssp             -TCSEEEECCCGGG---------------------SGGGHHHHHHHHH----HCCCSEEEC--SCCSSCTTSCCCCTTHH
T ss_pred             -CCCEEEECCcchh---------------------hhhHHHHHHHHHh----cCCCceEee--cccccCccccccCCcch
Confidence             7999999998531                     2333444554443    33 467763  4333211      1223


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcc--hhhhhhhhhhHHHHhhhccCCCCCCCHHHH
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE--ERTEDAMVGFRNFVARNANMQGTELTANDV  243 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  243 (280)
                      ..| .+|++++.+.+.       .|+++..+.||++.+..........  ......   .. . .........+++++|+
T Consensus       129 ~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~~~~~~~i~~~Dv  195 (308)
T 1qyc_A          129 SVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDK---VV-I-LGDGNARVVFVKEEDI  195 (308)
T ss_dssp             HHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSE---EE-E-ETTSCCEEEEECHHHH
T ss_pred             hHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCc---eE-E-ecCCCceEEEecHHHH
Confidence            568 999998887764       3688889999998765432211100  000000   00 0 0000011357889999


Q ss_pred             HHHHHHhcCCCCCceeecEEEeCC
Q 023553          244 ANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       244 a~~i~~l~s~~~~~~~G~~i~~dg  267 (280)
                      |++++.++...  ...|+.+.+.|
T Consensus       196 a~~~~~~l~~~--~~~~~~~~~~g  217 (308)
T 1qyc_A          196 GTFTIKAVDDP--RTLNKTLYLRL  217 (308)
T ss_dssp             HHHHHTTSSCG--GGTTEEEECCC
T ss_pred             HHHHHHHHhCc--cccCeEEEEeC
Confidence            99999999653  22367777764

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.42  E-value=5.6e-12  Score=108.27  Aligned_cols=203  Identities=16%  Similarity=0.068  Sum_probs=128.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +||||||+|.||+.+++.|.++|++|+++.|++..           .+   +..|     .+      ..+.+..+|.+|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------~~---~~~~-----~~------~~~~l~~~d~vi   56 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------GR---ITWD-----EL------AASGLPSCDAAV   56 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------TE---EEHH-----HH------HHHCCCSCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------Ce---eecc-----hh------hHhhccCCCEEE
Confidence            59999999999999999999999999999997542           11   1111     11      112346899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC-----------CCccc
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-----------GPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~-----------~~~~Y  168 (280)
                      |.||....  ......+.+..+..++.|+.+.-++.+++...  ..+...+|+.||.....+..           +...|
T Consensus        57 hla~~~i~--~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~  132 (298)
T 4b4o_A           57 NLAGENIL--NPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFF  132 (298)
T ss_dssp             ECCCCCSS--CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHH
T ss_pred             EeccCccc--chhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCCCCCcccccCCccccchh
Confidence            99985432  33445677778888999999988887776553  23334677777765543221           11223


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHh-h------hccCCCCCCCHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA-R------NANMQGTELTAN  241 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~  241 (280)
                      +..|...+.     +......++++..+.|+.+..+.....           ..+..... .      .......++..+
T Consensus       133 ~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~-----------~~~~~~~~~~~~~~~g~g~~~~~~ihv~  196 (298)
T 4b4o_A          133 SNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAM-----------GHMLLPFRLGLGGPIGSGHQFFPWIHIG  196 (298)
T ss_dssp             HHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHH-----------HHHHHHHHTTCCCCBTTSCSBCCEEEHH
T ss_pred             HHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCch-----------hHHHHHHhcCCcceecccCceeecCcHH
Confidence            333333221     122356789999999999988742110           00111111 1      111124567899


Q ss_pred             HHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          242 DVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       242 dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+++++..++...  ...| .+++.++..
T Consensus       197 Dva~a~~~~~~~~--~~~g-~yn~~~~~~  222 (298)
T 4b4o_A          197 DLAGILTHALEAN--HVHG-VLNGVAPSS  222 (298)
T ss_dssp             HHHHHHHHHHHCT--TCCE-EEEESCSCC
T ss_pred             HHHHHHHHHHhCC--CCCC-eEEEECCCc
Confidence            9999999998643  2345 777777654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.38  E-value=6.2e-14  Score=120.23  Aligned_cols=111  Identities=16%  Similarity=0.178  Sum_probs=83.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++++|+++||||++|+|++++..|+++|++|++++|+.++.+++.+.+.....+.++.+|+++++++.++++       
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-------  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-------
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-------
Confidence            3578999999999999999999999999999999999988777766555321234567789999988766555       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCH-HHHHHHhhhhhhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADL-SEFEKVFDINVKGVF  132 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  132 (280)
                      .+|++|||+|+...+ .++.+.+. +++...+++|+.+++
T Consensus       188 ~~DvlVn~ag~g~~~-~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 GAHFVFTAGAIGLEL-LPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             TCSEEEECCCTTCCS-BCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             hCCEEEECCCccccC-CChhHcCchHHHHHHHHhhhhhhH
Confidence            689999999864321 22222332 555668888888776

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.12  E-value=3.1e-10  Score=92.90  Aligned_cols=80  Identities=18%  Similarity=0.177  Sum_probs=62.5

Q ss_pred             ccCCcEEEEEcC----------------CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH
Q 023553           15 RLVGRVALITGG----------------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE   78 (280)
Q Consensus        15 ~l~~k~vlItGa----------------s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~   78 (280)
                      +++||++|||||                +||+|+++|+.|+++|++|++++++... +       ....+  -.+|+++.
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~-------~~~g~--~~~dv~~~   74 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-P-------TPPFV--KRVDVMTA   74 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-C-------CCTTE--EEEECCSH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-c-------cCCCC--eEEccCcH
Confidence            578999999999                6899999999999999999999886521 1       11122  24677775


Q ss_pred             HHHHHHHHHHHHHhCCccEEEECCCCCCC
Q 023553           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        79 ~~~~~~~~~~~~~~g~id~li~~ag~~~~  107 (280)
                      ++   +++.+.+.++++|++|||||+...
T Consensus        75 ~~---~~~~v~~~~~~~Dili~~Aav~d~  100 (226)
T 1u7z_A           75 LE---MEAAVNASVQQQNIFIGCAAVADY  100 (226)
T ss_dssp             HH---HHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             HH---HHHHHHHhcCCCCEEEECCcccCC
Confidence            54   567777888999999999998653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.08  E-value=2.3e-10  Score=99.69  Aligned_cols=162  Identities=13%  Similarity=0.067  Sum_probs=106.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCc--chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGA-------KVCIADVQD--NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .+++||||+|.||..++..|++.|+       .|+++++..  +........+.. ...+  . .|+.+.++..+.    
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~--~-~di~~~~~~~~a----   77 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--L-AGLEATDDPKVA----   77 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--E-EEEEEESCHHHH----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc--c-CCeEeccChHHH----
Confidence            4799999999999999999999986       799998874  222222222211 1122  1 355443333222    


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc--------cc
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG--------AI  160 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~--------~~  160 (280)
                         +...|++||.||....+     ..+   ..+.++.|+.+...+++++...-  ..+.+++++|+...        ..
T Consensus        78 ---~~~~D~Vih~Ag~~~~~-----~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~  144 (327)
T 1y7t_A           78 ---FKDADYALLVGAAPRKA-----GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNA  144 (327)
T ss_dssp             ---TTTCSEEEECCCCCCCT-----TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTC
T ss_pred             ---hCCCCEEEECCCcCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHc
Confidence               23799999999976431     223   35678999999999999887751  13468888887541        11


Q ss_pred             -cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceec
Q 023553          161 -GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT  203 (280)
Q Consensus       161 -~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t  203 (280)
                       +.++...|+.+|...+.+...+++.+   |+.+..+.|.++..
T Consensus       145 ~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G  185 (327)
T 1y7t_A          145 PGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWG  185 (327)
T ss_dssp             TTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEB
T ss_pred             CCCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEc
Confidence             23345679999999999999998875   34444444444333

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.94  E-value=1.8e-09  Score=88.66  Aligned_cols=93  Identities=15%  Similarity=0.264  Sum_probs=65.5

Q ss_pred             CCcEEEEEcC----------------CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHH
Q 023553           17 VGRVALITGG----------------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED   80 (280)
Q Consensus        17 ~~k~vlItGa----------------s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   80 (280)
                      +||++|||||                +|++|.++|+.|+++|+.|++++|+.....      .....+..  .|+.   +
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~------~~~~~~~~--~~v~---s   70 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP------EPHPNLSI--REIT---N   70 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC------CCCTTEEE--EECC---S
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------cCCCCeEE--EEHh---H
Confidence            5899999999                778999999999999999999999754210      00112333  3444   4


Q ss_pred             HHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHH
Q 023553           81 VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK  122 (280)
Q Consensus        81 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~  122 (280)
                      +.++++.+.+.++++|++|+||++...  .+....+.+++.+
T Consensus        71 ~~em~~~v~~~~~~~Dili~aAAvsD~--~p~~~~~~e~~~~  110 (232)
T 2gk4_A           71 TKDLLIEMQERVQDYQVLIHSMAVSDY--TPVYMTGLEEVQA  110 (232)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECSBCCSE--EEEEEEEHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCccccc--cchhhcchhhhhc
Confidence            556677777888999999999998654  3444344455443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.92  E-value=7.5e-09  Score=75.77  Aligned_cols=74  Identities=16%  Similarity=0.165  Sum_probs=61.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .+++++|+|+ |++|+.+++.|.+.| +.|++++|+++..+...     ...+.++.+|+++.+++.++++       ++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~~   70 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----RMGVATKQVDAKDEAGLAKALG-------GF   70 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----TTTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----hCCCcEEEecCCCHHHHHHHHc-------CC
Confidence            4678999999 999999999999999 89999999988776654     1345678899999887765543       89


Q ss_pred             cEEEECCC
Q 023553           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |++|++++
T Consensus        71 d~vi~~~~   78 (118)
T 3ic5_A           71 DAVISAAP   78 (118)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99999995

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.74  E-value=1.1e-11  Score=112.06  Aligned_cols=127  Identities=18%  Similarity=0.285  Sum_probs=77.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh---------CCCCCeEEEec---CCCCHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---------GGEPDTFFCHC---DVTKEEDV   81 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~---------~~~~~~~~~~~---D~~~~~~~   81 (280)
                      .++.||+++|+|++ +||+++|+.|+..|++|+++++++....+.....         ....++.+...   |+-+.+. 
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~vl~~e~-  338 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDH-  338 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCSBCHHH-
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhhhhHHH-
Confidence            45899999999998 9999999999999999999999877655443321         11123333211   2222221 


Q ss_pred             HHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHH-------hhhhhhhHHHHH-HHHHHhcccCCCceEEEE
Q 023553           82 CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV-------FDINVKGVFHGM-KHAARIMIPQTKGTIISI  153 (280)
Q Consensus        82 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~-------~~~n~~~~~~l~-~~~~~~l~~~~~g~iv~i  153 (280)
                         ++    . -+.+.+|+|+|...      .+.+.+.+...       +..|+.+..... +..++.|   ..|+||++
T Consensus       339 ---l~----~-mk~gaiVvNaG~~~------~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lL---aeGRIVNl  401 (488)
T 3ond_A          339 ---MK----K-MKNNAIVCNIGHFD------NEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIIL---AEGRLMNL  401 (488)
T ss_dssp             ---HT----T-SCTTEEEEESSSTT------TTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEE---GGGSCHHH
T ss_pred             ---HH----h-cCCCeEEEEcCCCC------cccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHH---cCCcEEEE
Confidence               11    1 26678888888642      24566666654       223332222111 2222333   24899999


Q ss_pred             cccccc
Q 023553          154 CSVAGA  159 (280)
Q Consensus       154 sS~~~~  159 (280)
                      +|..|+
T Consensus       402 sS~~G~  407 (488)
T 3ond_A          402 GCATGH  407 (488)
T ss_dssp             HHSCCS
T ss_pred             ecCccc
Confidence            998876

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.68  E-value=6.1e-08  Score=85.76  Aligned_cols=107  Identities=19%  Similarity=0.265  Sum_probs=75.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+++++++|+|+ |++|+.+++.+...|++|++++|+.++++...+....  .   +.+|.++.+++.+.+.       +
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~--~---~~~~~~~~~~l~~~~~-------~  229 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG--R---VITLTATEANIKKSVQ-------H  229 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT--S---EEEEECCHHHHHHHHH-------H
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc--e---EEEecCCHHHHHHHHh-------C
Confidence            578999999999 9999999999999999999999998877766544432  2   3456777777655543       7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      .|++|++++.....                     ++..+.+..++.|+  +++.||++++..
T Consensus       230 ~DvVi~~~g~~~~~---------------------~~~li~~~~l~~mk--~gg~iV~v~~~~  269 (369)
T 2eez_A          230 ADLLIGAVLVPGAK---------------------APKLVTRDMLSLMK--EGAVIVDVAVDQ  269 (369)
T ss_dssp             CSEEEECCC----------------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred             CCEEEECCCCCccc---------------------cchhHHHHHHHhhc--CCCEEEEEecCC
Confidence            89999999864210                     01223456777774  468999998754

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.67  E-value=8.7e-08  Score=85.78  Aligned_cols=80  Identities=16%  Similarity=0.180  Sum_probs=68.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC---CeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           19 RVALITGGATGIGESTVRLFHKHG---AKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g---~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+|| |++|+.+++.|++.|   ..|++.+|+.++.+++.+.+..  ..++..+.+|+++.+++.++++..     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            57899999 899999999999998   4899999999988887776642  135778899999999998888765     


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|+|||+++.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.64  E-value=4.7e-08  Score=75.85  Aligned_cols=75  Identities=19%  Similarity=0.180  Sum_probs=60.2

Q ss_pred             ChHHHHHHHHHHHcCCeEEEEecCcchH------HHHHHHhCCCCCeEEEecCCCCH--HHHHHHHHHHHHHhCCccEEE
Q 023553           28 TGIGESTVRLFHKHGAKVCIADVQDNLG------QQVCQSLGGEPDTFFCHCDVTKE--EDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        28 ~giG~~ia~~l~~~g~~Vi~~~r~~~~~------~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~li   99 (280)
                      +-++.++++.|+++|++|++..|+....      .+..+..  ..++..+.+|++++  +++.++++.+.+.+|+ |+||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            3477899999999999999998875432      2222222  24677788999999  9999999999998999 9999


Q ss_pred             ECCCCC
Q 023553          100 NNAGIS  105 (280)
Q Consensus       100 ~~ag~~  105 (280)
                      ||||+.
T Consensus       103 nnAgg~  108 (157)
T 3gxh_A          103 HCLANY  108 (157)
T ss_dssp             ECSBSH
T ss_pred             ECCCCC
Confidence            999974

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.60  E-value=8.1e-08  Score=83.63  Aligned_cols=104  Identities=17%  Similarity=0.168  Sum_probs=73.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|++++|+||++|||+++++.+...|++|+++++++++++.. +.+..  .   ..+|.++.+++.+.+.++..  +++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~--~---~~~d~~~~~~~~~~~~~~~~--~~~d  216 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGF--D---AAFNYKTVNSLEEALKKASP--DGYD  216 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTC--S---EEEETTSCSCHHHHHHHHCT--TCEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCC--c---EEEecCCHHHHHHHHHHHhC--CCCe
Confidence            689999999999999999999999999999999998877665 44431  2   22466663344444443322  5899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      ++|+|+|..                            .++..++.+.  .+|+++.++...+
T Consensus       217 ~vi~~~g~~----------------------------~~~~~~~~l~--~~G~~v~~g~~~~  248 (333)
T 1v3u_A          217 CYFDNVGGE----------------------------FLNTVLSQMK--DFGKIAICGAISV  248 (333)
T ss_dssp             EEEESSCHH----------------------------HHHHHHTTEE--EEEEEEECCCCC-
T ss_pred             EEEECCChH----------------------------HHHHHHHHHh--cCCEEEEEecccc
Confidence            999999720                            1234556553  4689999876543

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.57  E-value=6.2e-08  Score=77.88  Aligned_cols=103  Identities=18%  Similarity=0.253  Sum_probs=71.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|++++|+||++|||+++++.+...|++|++++++++..+... .+.  ...   .+|.++.+....+.+...  .+++|
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~g--~~~---~~d~~~~~~~~~~~~~~~--~~~~D  109 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLG--VEY---VGDSRSVDFADEILELTD--GYGVD  109 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTC--CSE---EEETTCSTHHHHHHHHTT--TCCEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcC--CCE---EeeCCcHHHHHHHHHHhC--CCCCe
Confidence            6899999999999999999999999999999999887665442 222  221   236666544333322221  13699


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      ++|+|+|.  .                          ..+..++.|.  .+|+++.+++..
T Consensus       110 ~vi~~~g~--~--------------------------~~~~~~~~l~--~~G~~v~~g~~~  140 (198)
T 1pqw_A          110 VVLNSLAG--E--------------------------AIQRGVQILA--PGGRFIELGKKD  140 (198)
T ss_dssp             EEEECCCT--H--------------------------HHHHHHHTEE--EEEEEEECSCGG
T ss_pred             EEEECCch--H--------------------------HHHHHHHHhc--cCCEEEEEcCCC
Confidence            99999962  1                          1345666664  368999988754

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.55  E-value=9.5e-08  Score=83.73  Aligned_cols=104  Identities=24%  Similarity=0.319  Sum_probs=74.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|+++||+|++++||+.+++.+...|++|+++++++++.+.. +.+.  .. .  .+|.++.+++.+.+.++.+  +++|
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~g--~~-~--~~d~~~~~~~~~~~~~~~~--~~~D  240 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSIG--GE-V--FIDFTKEKDIVGAVLKATD--GGAH  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHTT--CC-E--EEETTTCSCHHHHHHHHHT--SCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHcC--Cc-e--EEecCccHhHHHHHHHHhC--CCCC
Confidence            689999999999999999999999999999999988876544 3333  12 1  2376654455544544432  3799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      ++|+++|..                           ..++.+++.|.  .+|+++.+++..
T Consensus       241 ~vi~~~g~~---------------------------~~~~~~~~~l~--~~G~iv~~g~~~  272 (347)
T 2hcy_A          241 GVINVSVSE---------------------------AAIEASTRYVR--ANGTTVLVGMPA  272 (347)
T ss_dssp             EEEECSSCH---------------------------HHHHHHTTSEE--EEEEEEECCCCT
T ss_pred             EEEECCCcH---------------------------HHHHHHHHHHh--cCCEEEEEeCCC
Confidence            999999731                           02455666663  358999988754

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.55  E-value=9.9e-08  Score=82.85  Aligned_cols=104  Identities=15%  Similarity=0.157  Sum_probs=72.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|++++|+||++|||..+++.+...|++|+++++++++++.+.+ +.  .. ..  +|.++++...++.+...  .+++|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g--~~-~~--~~~~~~~~~~~~~~~~~--~~~~D  211 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AG--AW-QV--INYREEDLVERLKEITG--GKKVR  211 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HT--CS-EE--EETTTSCHHHHHHHHTT--TCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC--CC-EE--EECCCccHHHHHHHHhC--CCCce
Confidence            68999999999999999999999999999999999877665544 33  12 12  35555444333333221  13699


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      ++|+++| . .                          ..+..++.+.  .+|+++.+++..+
T Consensus       212 ~vi~~~g-~-~--------------------------~~~~~~~~l~--~~G~iv~~g~~~~  243 (327)
T 1qor_A          212 VVYDSVG-R-D--------------------------TWERSLDCLQ--RRGLMVSFGNSSG  243 (327)
T ss_dssp             EEEECSC-G-G--------------------------GHHHHHHTEE--EEEEEEECCCTTC
T ss_pred             EEEECCc-h-H--------------------------HHHHHHHHhc--CCCEEEEEecCCC
Confidence            9999998 2 1                          0345566663  3689999887644

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.54  E-value=2.1e-07  Score=84.33  Aligned_cols=78  Identities=14%  Similarity=0.200  Sum_probs=62.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++|+++|+| +|++|+++++.|++.|++|++++|+.++.+++.+.+   ..+..+.+|+++.+++.++++       ++|
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~---~~~~~~~~Dv~d~~~l~~~l~-------~~D   70 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---QHSTPISLDVNDDAALDAEVA-------KHD   70 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC---TTEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc---CCceEEEeecCCHHHHHHHHc-------CCc
Confidence            368899998 799999999999999999999999987665544322   246678899999988766553       899


Q ss_pred             EEEECCCCC
Q 023553           97 IMVNNAGIS  105 (280)
Q Consensus        97 ~li~~ag~~  105 (280)
                      +|||+++..
T Consensus        71 vVIn~a~~~   79 (450)
T 1ff9_A           71 LVISLIPYT   79 (450)
T ss_dssp             EEEECCC--
T ss_pred             EEEECCccc
Confidence            999999863

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.53  E-value=2.9e-08  Score=91.74  Aligned_cols=101  Identities=21%  Similarity=0.325  Sum_probs=68.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++||||+ |+|++++..|++.|++|++++|+.++.+++.+.+..  .+.    ++.+   +    +..  ..+.
T Consensus       361 ~l~~k~vlV~GaG-Gig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~--~~~----~~~d---l----~~~--~~~~  424 (523)
T 2o7s_A          361 PLASKTVVVIGAG-GAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG--KAL----SLTD---L----DNY--HPED  424 (523)
T ss_dssp             -----CEEEECCS-HHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC---CE----ETTT---T----TTC----CC
T ss_pred             ccCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC--cee----eHHH---h----hhc--cccC
Confidence            5789999999994 999999999999999999999999888887776642  221    1211   1    100  1135


Q ss_pred             ccEEEECCCCCCCC---CCCCCCCCHHHHHHHhhhhhhhH
Q 023553           95 LDIMVNNAGISGAP---CPDIREADLSEFEKVFDINVKGV  131 (280)
Q Consensus        95 id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~  131 (280)
                      +|++|||+|+...+   ..++.+.+.++|..++++|+.+.
T Consensus       425 ~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          425 GMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             SEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             ceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            89999999975321   13466667778888888988765

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.51  E-value=2.8e-07  Score=80.23  Aligned_cols=103  Identities=16%  Similarity=0.185  Sum_probs=71.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|++++|+||++|||.++++.+...|++|+++++++++++.+.+ +.  ... .  +|.++.+...++.+...  ..++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g--~~~-~--~d~~~~~~~~~i~~~~~--~~~~d  216 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LG--CHH-T--INYSTQDFAEVVREITG--GKGVD  216 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT--CSE-E--EETTTSCHHHHHHHHHT--TCCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC--CCE-E--EECCCHHHHHHHHHHhC--CCCCe
Confidence            68999999999999999999999999999999999877665543 33  121 2  35555443333332221  13799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      ++|+++|.  .                          ..+..++.+.  .+|+++.++...
T Consensus       217 ~vi~~~g~--~--------------------------~~~~~~~~l~--~~G~iv~~g~~~  247 (333)
T 1wly_A          217 VVYDSIGK--D--------------------------TLQKSLDCLR--PRGMCAAYGHAS  247 (333)
T ss_dssp             EEEECSCT--T--------------------------THHHHHHTEE--EEEEEEECCCTT
T ss_pred             EEEECCcH--H--------------------------HHHHHHHhhc--cCCEEEEEecCC
Confidence            99999984  1                          1345556663  368999887654

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.45  E-value=7.4e-07  Score=76.74  Aligned_cols=84  Identities=14%  Similarity=0.249  Sum_probs=61.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC---cchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ---DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+   .++.+++.+++...........++.+.+++.+.+.   
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~---  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA---  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc---
Confidence            4678999999998 6999999999999999 79999999   77777776665422122233346666655543333   


Q ss_pred             HHhCCccEEEECCCCC
Q 023553           90 EKFGTLDIMVNNAGIS  105 (280)
Q Consensus        90 ~~~g~id~li~~ag~~  105 (280)
                          ..|++||+....
T Consensus       226 ----~aDiIINaTp~G  237 (315)
T 3tnl_A          226 ----ESVIFTNATGVG  237 (315)
T ss_dssp             ----TCSEEEECSSTT
T ss_pred             ----CCCEEEECccCC
Confidence                789999997643

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.44  E-value=6.4e-07  Score=81.42  Aligned_cols=81  Identities=14%  Similarity=0.169  Sum_probs=63.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++++++++|+|+ |++|++++..|++. |++|++++|+.++.+++.+. .   .+..+.+|+.+.+++.++++     
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-~---~~~~~~~D~~d~~~l~~~l~-----   87 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-S---GSKAISLDVTDDSALDKVLA-----   87 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-G---TCEEEECCTTCHHHHHHHHH-----
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-c---CCcEEEEecCCHHHHHHHHc-----
Confidence            35678999999997 99999999999998 78899999998887776554 1   34566789999888766554     


Q ss_pred             hCCccEEEECCCCC
Q 023553           92 FGTLDIMVNNAGIS  105 (280)
Q Consensus        92 ~g~id~li~~ag~~  105 (280)
                        ++|+|||+++..
T Consensus        88 --~~DvVIn~tp~~   99 (467)
T 2axq_A           88 --DNDVVISLIPYT   99 (467)
T ss_dssp             --TSSEEEECSCGG
T ss_pred             --CCCEEEECCchh
Confidence              799999999854

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.33  E-value=6.5e-07  Score=67.57  Aligned_cols=77  Identities=18%  Similarity=0.279  Sum_probs=56.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++++++|+|+ |++|+.+++.|.+.|++|++++++++..+...    .. ...++.+|.++.+.+.++      ..++
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~-~~~~~~~d~~~~~~l~~~------~~~~   70 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY-ATHAVIANATEENELLSL------GIRN   70 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TT-CSEEEECCTTCHHHHHTT------TGGG
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh-CCEEEEeCCCCHHHHHhc------CCCC
Confidence            356788999998 99999999999999999999999876544322    11 234577899887655332      1347


Q ss_pred             ccEEEECCC
Q 023553           95 LDIMVNNAG  103 (280)
Q Consensus        95 id~li~~ag  103 (280)
                      .|++|++++
T Consensus        71 ~d~vi~~~~   79 (144)
T 2hmt_A           71 FEYVIVAIG   79 (144)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999986

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.33  E-value=2.5e-06  Score=64.43  Aligned_cols=76  Identities=16%  Similarity=0.061  Sum_probs=59.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .++++++|+|+ |.+|+.+++.|.+.|+.|++++++++..+.+.+.     .+.++.+|.++++.+.++      ...+.
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~~~------~~~~~   71 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-----GFDAVIADPTDESFYRSL------DLEGV   71 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-----TCEEEECCTTCHHHHHHS------CCTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-----CCcEEECCCCCHHHHHhC------CcccC
Confidence            34678999998 6799999999999999999999998877665442     356788999999876543      12478


Q ss_pred             cEEEECCC
Q 023553           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |++|.+.+
T Consensus        72 d~vi~~~~   79 (141)
T 3llv_A           72 SAVLITGS   79 (141)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEecC
Confidence            99998875

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.32  E-value=1.2e-06  Score=74.07  Aligned_cols=77  Identities=10%  Similarity=0.143  Sum_probs=58.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+.....+.  .+|.   +++       .+  ++
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~--~~~~---~~~-------~~--~~  180 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQ--ALSM---DEL-------EG--HE  180 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEE--ECCS---GGG-------TT--CC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCee--EecH---HHh-------cc--CC
Confidence            578999999998 699999999999999999999999988887776654322221  2333   111       11  58


Q ss_pred             ccEEEECCCCCC
Q 023553           95 LDIMVNNAGISG  106 (280)
Q Consensus        95 id~li~~ag~~~  106 (280)
                      .|++||+++...
T Consensus       181 ~DivVn~t~~~~  192 (271)
T 1nyt_A          181 FDLIINATSSGI  192 (271)
T ss_dssp             CSEEEECCSCGG
T ss_pred             CCEEEECCCCCC
Confidence            999999998753

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.32  E-value=6.6e-07  Score=78.17  Aligned_cols=104  Identities=16%  Similarity=0.164  Sum_probs=72.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|++++|+||++++|..+++.+...|++|+++++++++++.+.+.+..  . ..  +|.++.+++.+.+.++..  +++|
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~--~-~~--~d~~~~~~~~~~~~~~~~--~~~d  227 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF--D-DA--FNYKEESDLTAALKRCFP--NGID  227 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC--S-EE--EETTSCSCSHHHHHHHCT--TCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC--c-eE--EecCCHHHHHHHHHHHhC--CCCc
Confidence            689999999999999999999999999999999998877665434431  2 12  355544333333333321  4799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      ++|+++|..                            ..+..++.+.  .+|+++.++...
T Consensus       228 ~vi~~~g~~----------------------------~~~~~~~~l~--~~G~~v~~G~~~  258 (345)
T 2j3h_A          228 IYFENVGGK----------------------------MLDAVLVNMN--MHGRIAVCGMIS  258 (345)
T ss_dssp             EEEESSCHH----------------------------HHHHHHTTEE--EEEEEEECCCGG
T ss_pred             EEEECCCHH----------------------------HHHHHHHHHh--cCCEEEEEcccc
Confidence            999999730                            1445566663  468999887654

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.31  E-value=3.6e-07  Score=77.98  Aligned_cols=81  Identities=15%  Similarity=0.204  Sum_probs=58.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCC-CeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|+++|+|++ |+|++++..|++.| +|++++|+.++.+++.+.+.... ....+.+|+++.          .+.+
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~  191 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDL  191 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCC
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhh
Confidence            35789999999997 99999999999999 99999999887777665543110 000112343331          2345


Q ss_pred             CCccEEEECCCCCC
Q 023553           93 GTLDIMVNNAGISG  106 (280)
Q Consensus        93 g~id~li~~ag~~~  106 (280)
                      +++|++|||+|...
T Consensus       192 ~~~DilVn~ag~~~  205 (287)
T 1nvt_A          192 DGVDIIINATPIGM  205 (287)
T ss_dssp             TTCCEEEECSCTTC
T ss_pred             CCCCEEEECCCCCC
Confidence            78999999999754

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.29  E-value=5.7e-06  Score=74.88  Aligned_cols=110  Identities=23%  Similarity=0.319  Sum_probs=76.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEE--ecCCC---------CHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC--HCDVT---------KEEDVCSA   84 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~--~~D~~---------~~~~~~~~   84 (280)
                      ..|++|+|+||+|+||...++.+...|++|+++++++++++.+ +++..  ...+.  ..|+.         +.+++.++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~lGa--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  295 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RALGC--DLVINRAELGITDDIADDPRRVVETGRKL  295 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTC--CCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCC--CEEEecccccccccccccccccchhhhHH
Confidence            3689999999999999999999999999999999888877655 44432  21121  12221         23455566


Q ss_pred             HHHHHHHhC-CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           85 VDLTVEKFG-TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        85 ~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      .+.+.+..+ ++|++|+++|..                            ..+..++.+  +.+|+++.+++..+
T Consensus       296 ~~~v~~~~g~g~Dvvid~~G~~----------------------------~~~~~~~~l--~~~G~iv~~G~~~~  340 (447)
T 4a0s_A          296 AKLVVEKAGREPDIVFEHTGRV----------------------------TFGLSVIVA--RRGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHSSCCSEEEECSCHH----------------------------HHHHHHHHS--CTTCEEEESCCTTC
T ss_pred             HHHHHHHhCCCceEEEECCCch----------------------------HHHHHHHHH--hcCCEEEEEecCCC
Confidence            677766654 699999999731                            124455555  45799999987654

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.27  E-value=1.7e-06  Score=75.80  Aligned_cols=77  Identities=14%  Similarity=0.186  Sum_probs=56.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      .|++++|+||++|+|..+++.+...|++|+++++++++++.. +.+.  .. ..  +|..+.+...    .+.+..  ++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g--a~-~~--~d~~~~~~~~----~~~~~~~~~~  239 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNG--AH-EV--FNHREVNYID----KIKKYVGEKG  239 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT--CS-EE--EETTSTTHHH----HHHHHHCTTC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHcC--CC-EE--EeCCCchHHH----HHHHHcCCCC
Confidence            689999999999999999999999999999999998877643 3433  12 12  3555544333    333333  27


Q ss_pred             ccEEEECCC
Q 023553           95 LDIMVNNAG  103 (280)
Q Consensus        95 id~li~~ag  103 (280)
                      +|++|+++|
T Consensus       240 ~D~vi~~~G  248 (351)
T 1yb5_A          240 IDIIIEMLA  248 (351)
T ss_dssp             EEEEEESCH
T ss_pred             cEEEEECCC
Confidence            999999997

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.27  E-value=2.5e-06  Score=74.46  Aligned_cols=102  Identities=16%  Similarity=0.212  Sum_probs=71.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      .|++++|+|+++++|..+++.+...|++|+++++++++++.+. .+.  ... .  +|.++++-    .+.+.+..  ++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g--a~~-~--~d~~~~~~----~~~~~~~~~~~~  235 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALG--ADE-T--VNYTHPDW----PKEVRRLTGGKG  235 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHT--CSE-E--EETTSTTH----HHHHHHHTTTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcC--CCE-E--EcCCcccH----HHHHHHHhCCCC
Confidence            6899999999999999999999999999999999988776654 333  121 2  36555432    22333332  37


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      +|++|+++| . .  .                        .+.+++.+.  ..|+++.+++..+
T Consensus       236 ~d~vi~~~g-~-~--~------------------------~~~~~~~l~--~~G~~v~~g~~~~  269 (343)
T 2eih_A          236 ADKVVDHTG-A-L--Y------------------------FEGVIKATA--NGGRIAIAGASSG  269 (343)
T ss_dssp             EEEEEESSC-S-S--S------------------------HHHHHHHEE--EEEEEEESSCCCS
T ss_pred             ceEEEECCC-H-H--H------------------------HHHHHHhhc--cCCEEEEEecCCC
Confidence            999999998 2 1  0                        345556663  3689999887654

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.27  E-value=1.3e-06  Score=76.74  Aligned_cols=103  Identities=17%  Similarity=0.168  Sum_probs=71.8

Q ss_pred             CC--cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-
Q 023553           17 VG--RVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-   92 (280)
Q Consensus        17 ~~--k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   92 (280)
                      .|  ++++|+||++|||..+++.+...|+ +|+++++++++.+.+.+.+..  . .  .+|.++.+..    +.+.+.. 
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~--~-~--~~d~~~~~~~----~~~~~~~~  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF--D-A--AINYKKDNVA----EQLRESCP  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC--S-E--EEETTTSCHH----HHHHHHCT
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC--c-e--EEecCchHHH----HHHHHhcC
Confidence            57  9999999999999999999999999 999999998877666543432  2 1  2455553322    2222222 


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      +++|++|+|+|.  .                          ..+..++.+.  .+|+++.++...+
T Consensus       229 ~~~d~vi~~~G~--~--------------------------~~~~~~~~l~--~~G~iv~~G~~~~  264 (357)
T 2zb4_A          229 AGVDVYFDNVGG--N--------------------------ISDTVISQMN--ENSHIILCGQISQ  264 (357)
T ss_dssp             TCEEEEEESCCH--H--------------------------HHHHHHHTEE--EEEEEEECCCGGG
T ss_pred             CCCCEEEECCCH--H--------------------------HHHHHHHHhc--cCcEEEEECCccc
Confidence            379999999972  0                          1345566663  3689998876543

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.26  E-value=1.5e-06  Score=76.31  Aligned_cols=78  Identities=21%  Similarity=0.280  Sum_probs=57.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      .|++++|+||++|||..+++.+...|++|+++++++++++.+ +.+.  .. .  .+|..+.+...    .+.+..  ++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g--~~-~--~~~~~~~~~~~----~~~~~~~~~~  231 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLG--AA-A--GFNYKKEDFSE----ATLKFTKGAG  231 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHT--CS-E--EEETTTSCHHH----HHHHHTTTSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC--Cc-E--EEecCChHHHH----HHHHHhcCCC
Confidence            689999999999999999999999999999999998877665 4443  12 1  23555543333    333333  37


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|+++|.
T Consensus       232 ~d~vi~~~G~  241 (354)
T 2j8z_A          232 VNLILDCIGG  241 (354)
T ss_dssp             EEEEEESSCG
T ss_pred             ceEEEECCCc
Confidence            9999999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.25  E-value=1.8e-06  Score=75.13  Aligned_cols=103  Identities=17%  Similarity=0.195  Sum_probs=72.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   95 (280)
                      +|++++|+|++++||..+++.+...|++|+++++++++.+.+.+.+..  .. .  .|.++.+...    .+.+.. +++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~--~~-~--~~~~~~~~~~----~~~~~~~~~~  219 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF--DG-A--IDYKNEDLAA----GLKRECPKGI  219 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC--SE-E--EETTTSCHHH----HHHHHCTTCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC--CE-E--EECCCHHHHH----HHHHhcCCCc
Confidence            689999999999999999999999999999999998887766455432  21 2  3555543322    222222 479


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      |++|+++|..                            ..+.+++.+.  .+|+++.++...+
T Consensus       220 d~vi~~~g~~----------------------------~~~~~~~~l~--~~G~iv~~G~~~~  252 (336)
T 4b7c_A          220 DVFFDNVGGE----------------------------ILDTVLTRIA--FKARIVLCGAISQ  252 (336)
T ss_dssp             EEEEESSCHH----------------------------HHHHHHTTEE--EEEEEEECCCGGG
T ss_pred             eEEEECCCcc----------------------------hHHHHHHHHh--hCCEEEEEeeccc
Confidence            9999999730                            1345556663  4689999877653

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.19  E-value=2.3e-06  Score=74.20  Aligned_cols=102  Identities=17%  Similarity=0.211  Sum_probs=71.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      +|++++|+||++++|..+++.+...|++|+++++++++++.+. ++.  .. ..  .|.++.+.    .+.+.+..  .+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~G--a~-~~--~~~~~~~~----~~~~~~~~~~~g  209 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALG--AW-ET--IDYSHEDV----AKRVLELTDGKK  209 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHT--CS-EE--EETTTSCH----HHHHHHHTTTCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC--CC-EE--EeCCCccH----HHHHHHHhCCCC
Confidence            6899999999999999999999999999999999988776554 333  12 12  24444332    23333333  27


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      +|++|+++|..                            ..+..++.+  +.+|+++.++...+
T Consensus       210 ~Dvvid~~g~~----------------------------~~~~~~~~l--~~~G~iv~~g~~~~  243 (325)
T 3jyn_A          210 CPVVYDGVGQD----------------------------TWLTSLDSV--APRGLVVSFGNASG  243 (325)
T ss_dssp             EEEEEESSCGG----------------------------GHHHHHTTE--EEEEEEEECCCTTC
T ss_pred             ceEEEECCChH----------------------------HHHHHHHHh--cCCCEEEEEecCCC
Confidence            99999999841                            133455665  34689999887554

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.17  E-value=2.5e-06  Score=74.13  Aligned_cols=103  Identities=17%  Similarity=0.267  Sum_probs=71.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--C
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   93 (280)
                      .+|++++|+||++++|..+++.+...|++|+++++++++++.. +++.  ... .  .|..+.+.    .+.+.+..  .
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g--a~~-~--~~~~~~~~----~~~~~~~~~~~  216 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEYG--AEY-L--INASKEDI----LRQVLKFTNGK  216 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT--CSE-E--EETTTSCH----HHHHHHHTTTS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcC--CcE-E--EeCCCchH----HHHHHHHhCCC
Confidence            3689999999999999999999999999999999998877644 4443  222 2  24444332    23333333  3


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      ++|++|+++|.  .                          ..+..++.+  +.+|+++.++...+
T Consensus       217 g~D~vid~~g~--~--------------------------~~~~~~~~l--~~~G~iv~~G~~~~  251 (334)
T 3qwb_A          217 GVDASFDSVGK--D--------------------------TFEISLAAL--KRKGVFVSFGNASG  251 (334)
T ss_dssp             CEEEEEECCGG--G--------------------------GHHHHHHHE--EEEEEEEECCCTTC
T ss_pred             CceEEEECCCh--H--------------------------HHHHHHHHh--ccCCEEEEEcCCCC
Confidence            69999999984  1                          133455665  34689999876543

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.14  E-value=7.6e-06  Score=70.32  Aligned_cols=84  Identities=12%  Similarity=0.214  Sum_probs=59.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC---cchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ---DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+   .++.+++.+++...........+..+.+...+.+    
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l----  218 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEAL----  218 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH----
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhc----
Confidence            4578999999997 8999999999999998 79999999   7777776665542211222233555543222222    


Q ss_pred             HHhCCccEEEECCCCC
Q 023553           90 EKFGTLDIMVNNAGIS  105 (280)
Q Consensus        90 ~~~g~id~li~~ag~~  105 (280)
                         ...|++||+....
T Consensus       219 ---~~~DiIINaTp~G  231 (312)
T 3t4e_A          219 ---ASADILTNGTKVG  231 (312)
T ss_dssp             ---HHCSEEEECSSTT
T ss_pred             ---cCceEEEECCcCC
Confidence               2679999987653

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.13  E-value=7.2e-06  Score=72.22  Aligned_cols=99  Identities=16%  Similarity=0.234  Sum_probs=68.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc---chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD---NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++|++++|+|+ |++|..+++.+...|++|+++++++   ++.+.+ +.+.    ...+  | .+  ++.+.+.+ ..  
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~g----a~~v--~-~~--~~~~~~~~-~~--  244 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EETK----TNYY--N-SS--NGYDKLKD-SV--  244 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHHT----CEEE--E-CT--TCSHHHHH-HH--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHhC----Ccee--c-hH--HHHHHHHH-hC--
Confidence            45999999999 9999999999999999999999988   665433 3443    1222  4 44  22122222 12  


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHH-HHHHHhcccCCCceEEEEcccc
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM-KHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~-~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      +++|++|+++|...                           .+ +.+++.|.  .+|+++.++...
T Consensus       245 ~~~d~vid~~g~~~---------------------------~~~~~~~~~l~--~~G~iv~~g~~~  281 (366)
T 2cdc_A          245 GKFDVIIDATGADV---------------------------NILGNVIPLLG--RNGVLGLFGFST  281 (366)
T ss_dssp             CCEEEEEECCCCCT---------------------------HHHHHHGGGEE--EEEEEEECSCCC
T ss_pred             CCCCEEEECCCChH---------------------------HHHHHHHHHHh--cCCEEEEEecCC
Confidence            68999999998521                           13 56667763  358999887654

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.12  E-value=3.3e-05  Score=67.45  Aligned_cols=103  Identities=10%  Similarity=0.080  Sum_probs=69.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +++++|+||++++|...++.+...|++|+++++++++++.+. ++.  .+ .++  |..+.+...++.+....  .++|+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~G--a~-~~~--~~~~~~~~~~v~~~~~~--~g~D~  236 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIG--AA-HVL--NEKAPDFEATLREVMKA--EQPRI  236 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHT--CS-EEE--ETTSTTHHHHHHHHHHH--HCCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC--CC-EEE--ECCcHHHHHHHHHHhcC--CCCcE
Confidence            389999999999999999999999999999999988876654 343  12 122  44443332222222222  28999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      +|+++|..                            ..+.+++.+  +.+|+++.+++..+
T Consensus       237 vid~~g~~----------------------------~~~~~~~~l--~~~G~iv~~G~~~~  267 (349)
T 3pi7_A          237 FLDAVTGP----------------------------LASAIFNAM--PKRARWIIYGRLDP  267 (349)
T ss_dssp             EEESSCHH----------------------------HHHHHHHHS--CTTCEEEECCCSCC
T ss_pred             EEECCCCh----------------------------hHHHHHhhh--cCCCEEEEEeccCC
Confidence            99999731                            013445555  45799999886544

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.10  E-value=5.2e-06  Score=72.55  Aligned_cols=78  Identities=15%  Similarity=0.243  Sum_probs=56.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--C
Q 023553           17 VGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   93 (280)
                      .|++++|+|+++++|..+++.+... |++|+++++++++++.+. ++.  ... .  .|..+.+..    +.+.+..  +
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g--~~~-~--~~~~~~~~~----~~~~~~~~~~  239 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAG--ADY-V--INASMQDPL----AEIRRITESK  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHT--CSE-E--EETTTSCHH----HHHHHHTTTS
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhC--CCE-E--ecCCCccHH----HHHHHHhcCC
Confidence            6899999999999999999999999 999999999988776553 343  222 2  244443322    2222222  5


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|++|+++|.
T Consensus       240 ~~d~vi~~~g~  250 (347)
T 1jvb_A          240 GVDAVIDLNNS  250 (347)
T ss_dssp             CEEEEEESCCC
T ss_pred             CceEEEECCCC
Confidence            89999999984

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.10  E-value=7.4e-06  Score=72.50  Aligned_cols=107  Identities=15%  Similarity=0.176  Sum_probs=73.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+.+++++|+|+ |+||+.+++.+...|++|++++++.+.++...+....  .+.   ++..+.+++.+++.       .
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~--~~~---~~~~~~~~l~~~l~-------~  231 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG--RIH---TRYSSAYELEGAVK-------R  231 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT--SSE---EEECCHHHHHHHHH-------H
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC--eeE---eccCCHHHHHHHHc-------C
Confidence            588999999998 9999999999999999999999998887766554432  211   23344555443332       7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      .|++|++++..... .+                    ..+.+..++.|  ++++.||++++..
T Consensus       232 aDvVi~~~~~p~~~-t~--------------------~li~~~~l~~m--k~g~~iV~va~~~  271 (377)
T 2vhw_A          232 ADLVIGAVLVPGAK-AP--------------------KLVSNSLVAHM--KPGAVLVDIAIDQ  271 (377)
T ss_dssp             CSEEEECCCCTTSC-CC--------------------CCBCHHHHTTS--CTTCEEEEGGGGT
T ss_pred             CCEEEECCCcCCCC-Cc--------------------ceecHHHHhcC--CCCcEEEEEecCC
Confidence            89999998754210 00                    11134556666  3468899988543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.08  E-value=2.8e-05  Score=67.48  Aligned_cols=150  Identities=11%  Similarity=0.029  Sum_probs=96.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecC----cchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGA-------KVCIADVQ----DNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~-------~Vi~~~r~----~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~   85 (280)
                      ..+++||||+|.+|..++..|+..|.       .|++++++    .++.+.....+... ..+.   .|+....+..   
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~---   78 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPM---   78 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcH---
Confidence            45899999999999999999999885       79999988    54444333333221 1111   1222211221   


Q ss_pred             HHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc-------
Q 023553           86 DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-------  158 (280)
Q Consensus        86 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~-------  158 (280)
                          +.+...|++|+.||....     ...+.   .+.+..|+.....+++.+..+-  ..+++|+++|.-..       
T Consensus        79 ----~al~~aD~Vi~~ag~~~~-----~g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~  144 (329)
T 1b8p_A           79 ----TAFKDADVALLVGARPRG-----PGMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAM  144 (329)
T ss_dssp             ----HHTTTCSEEEECCCCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHH
T ss_pred             ----HHhCCCCEEEEeCCCCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHH
Confidence                123489999999997542     12333   3467888888888888777752  14578999986331       


Q ss_pred             -cc-cCCCCccchhhHHHHHHHHHHHHHHHC
Q 023553          159 -AI-GGLGPHAYTGSKHAVLGLNKNVAAELG  187 (280)
Q Consensus       159 -~~-~~~~~~~Y~~sK~al~~~~~~la~e~~  187 (280)
                       .. +.|....|+.++.--..+...+++.+.
T Consensus       145 ~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          145 KSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence             11 233444688887767778888888874

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.05  E-value=1.1e-05  Score=70.72  Aligned_cols=103  Identities=20%  Similarity=0.288  Sum_probs=71.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|++++|+||++++|..+++.+...|++|+++++++++++.+.+ +.  .. ..  .|..+.+....+.+ ..  .+++|
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lG--a~-~~--~~~~~~~~~~~~~~-~~--~~g~D  237 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-LG--AK-RG--INYRSEDFAAVIKA-ET--GQGVD  237 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT--CS-EE--EETTTSCHHHHHHH-HH--SSCEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC--CC-EE--EeCCchHHHHHHHH-Hh--CCCce
Confidence            68999999999999999999999999999999999888765543 33  12 12  24444333222222 22  35799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      ++|+++|..                            ..+..++.+  +.+|+++.++...+
T Consensus       238 vvid~~g~~----------------------------~~~~~~~~l--~~~G~iv~~g~~~~  269 (353)
T 4dup_A          238 IILDMIGAA----------------------------YFERNIASL--AKDGCLSIIAFLGG  269 (353)
T ss_dssp             EEEESCCGG----------------------------GHHHHHHTE--EEEEEEEECCCTTC
T ss_pred             EEEECCCHH----------------------------HHHHHHHHh--ccCCEEEEEEecCC
Confidence            999999831                            023445555  33689998876543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.98  E-value=3.2e-05  Score=68.09  Aligned_cols=99  Identities=19%  Similarity=0.313  Sum_probs=70.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|++++|+|+ |++|..+++.+...|++|+++++++++.+...+.+.  .+ .+  .|..+.+.+.       +..+++|
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lG--a~-~v--~~~~~~~~~~-------~~~~~~D  253 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFG--AD-SF--LVSRDQEQMQ-------AAAGTLD  253 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSC--CS-EE--EETTCHHHHH-------HTTTCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC--Cc-eE--EeccCHHHHH-------HhhCCCC
Confidence            7899999996 999999999999999999999999888776654443  12 22  3555554332       2235899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      ++|+++|....                           ++..++.|.  ..|+++.+++..
T Consensus       254 ~vid~~g~~~~---------------------------~~~~~~~l~--~~G~iv~~g~~~  285 (366)
T 1yqd_A          254 GIIDTVSAVHP---------------------------LLPLFGLLK--SHGKLILVGAPE  285 (366)
T ss_dssp             EEEECCSSCCC---------------------------SHHHHHHEE--EEEEEEECCCCS
T ss_pred             EEEECCCcHHH---------------------------HHHHHHHHh--cCCEEEEEccCC
Confidence            99999985311                           234455553  368999988754

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.98  E-value=1.9e-05  Score=67.02  Aligned_cols=80  Identities=18%  Similarity=0.256  Sum_probs=57.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.+... ..+.+...+..+.+   +.+.      
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~---~~l~------  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIE---DVIA------  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHH---HHHH------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHH---HHHh------
Confidence            578999999998 7999999999999999 6999999999888777665421 11222233433322   2222      


Q ss_pred             CCccEEEECCCCC
Q 023553           93 GTLDIMVNNAGIS  105 (280)
Q Consensus        93 g~id~li~~ag~~  105 (280)
                       ..|++||+....
T Consensus       194 -~~DiVInaTp~G  205 (283)
T 3jyo_A          194 -AADGVVNATPMG  205 (283)
T ss_dssp             -HSSEEEECSSTT
T ss_pred             -cCCEEEECCCCC
Confidence             679999997653

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.96  E-value=1.1e-05  Score=70.19  Aligned_cols=79  Identities=14%  Similarity=0.143  Sum_probs=57.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--C
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   93 (280)
                      .+|++++|+|+++++|..+++.+...|++|+++++++++++.+.+ +.  .+. .  .|..+.+.    .+.+.+..  .
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lg--a~~-~--~~~~~~~~----~~~~~~~~~~~  212 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LG--AAY-V--IDTSTAPL----YETVMELTNGI  212 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HT--CSE-E--EETTTSCH----HHHHHHHTTTS
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CC--CcE-E--EeCCcccH----HHHHHHHhCCC
Confidence            368999999999999999999999999999999999887766544 33  122 2  24444332    23333333  2


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|++|+++|.
T Consensus       213 g~Dvvid~~g~  223 (340)
T 3gms_A          213 GADAAIDSIGG  223 (340)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            79999999974

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.95  E-value=2.6e-05  Score=65.87  Aligned_cols=77  Identities=10%  Similarity=0.119  Sum_probs=57.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+++.+.+.....+..  +|+   +++.       +  +.
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~--~~~---~~~~-------~--~~  180 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA--VSM---DSIP-------L--QT  180 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE--EEG---GGCC-------C--SC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE--eeH---HHhc-------c--CC
Confidence            578999999998 7999999999999999999999999888887766542212222  232   1110       0  48


Q ss_pred             ccEEEECCCCCC
Q 023553           95 LDIMVNNAGISG  106 (280)
Q Consensus        95 id~li~~ag~~~  106 (280)
                      .|++||+++...
T Consensus       181 ~DivIn~t~~~~  192 (272)
T 1p77_A          181 YDLVINATSAGL  192 (272)
T ss_dssp             CSEEEECCCC--
T ss_pred             CCEEEECCCCCC
Confidence            999999998653

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.93  E-value=2e-05  Score=68.59  Aligned_cols=101  Identities=22%  Similarity=0.259  Sum_probs=69.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|++++|+|+ +++|..+++.+...|++|+++++++++++.+. .+..  . .+  +|.++.+ +.   +.+.+..+++|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa--~-~~--~d~~~~~-~~---~~~~~~~~~~d  232 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGA--D-LV--VNPLKED-AA---KFMKEKVGGVH  232 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTC--S-EE--ECTTTSC-HH---HHHHHHHSSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCC--C-EE--ecCCCcc-HH---HHHHHHhCCCC
Confidence            6899999999 88999999999999999999999988776553 3331  2 12  3655432 22   22222226899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      ++|+++|...                           .++..++.+.  ..|+++.+++..
T Consensus       233 ~vid~~g~~~---------------------------~~~~~~~~l~--~~G~~v~~g~~~  264 (339)
T 1rjw_A          233 AAVVTAVSKP---------------------------AFQSAYNSIR--RGGACVLVGLPP  264 (339)
T ss_dssp             EEEESSCCHH---------------------------HHHHHHHHEE--EEEEEEECCCCS
T ss_pred             EEEECCCCHH---------------------------HHHHHHHHhh--cCCEEEEecccC
Confidence            9999997410                           2445566663  368999887654

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.92  E-value=2.6e-05  Score=66.67  Aligned_cols=78  Identities=13%  Similarity=0.216  Sum_probs=58.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+.+..... ..+     +.++       +.+...
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-~~~-----~~~~-------~~~~~~  203 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-AYF-----SLAE-------AETRLA  203 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-CEE-----CHHH-------HHHTGG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-cee-----eHHH-------HHhhhc
Confidence            578999999998 7899999999999998 899999999988888777643211 111     2222       223345


Q ss_pred             CccEEEECCCCCC
Q 023553           94 TLDIMVNNAGISG  106 (280)
Q Consensus        94 ~id~li~~ag~~~  106 (280)
                      ..|++||+.+...
T Consensus       204 ~aDivIn~t~~~~  216 (297)
T 2egg_A          204 EYDIIINTTSVGM  216 (297)
T ss_dssp             GCSEEEECSCTTC
T ss_pred             cCCEEEECCCCCC
Confidence            8999999998653

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.90  E-value=0.00023  Score=61.59  Aligned_cols=149  Identities=18%  Similarity=0.165  Sum_probs=86.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ..+++|+||+|.+|..++..|++.|  ..|++++++++ .....+..+......+ .. +.+..+..+.       +...
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~~~~~v-~~-~~~t~d~~~a-------l~ga   77 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMDTGAVV-RG-FLGQQQLEAA-------LTGM   77 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSCSSCEE-EE-EESHHHHHHH-------HTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcccccceE-EE-EeCCCCHHHH-------cCCC
Confidence            4579999999999999999999988  78999988765 2222222221111111 11 2223333222       3489


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc------------ccCC
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA------------IGGL  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~------------~~~~  163 (280)
                      |++|+.||....+     ..+..   +.+..|+.....+++.+...   ..++.|+++|.....            .+.|
T Consensus        78 DvVi~~ag~~~~~-----g~~r~---dl~~~N~~~~~~i~~~i~~~---~p~~~viv~SNPv~~~~~~~t~~~~~~~~~p  146 (326)
T 1smk_A           78 DLIIVPAGVPRKP-----GMTRD---DLFKINAGIVKTLCEGIAKC---CPRAIVNLISNPVNSTVPIAAEVFKKAGTYD  146 (326)
T ss_dssp             SEEEECCCCCCCS-----SCCCS---HHHHHHHHHHHHHHHHHHHH---CTTSEEEECCSSHHHHHHHHHHHHHHHTCCC
T ss_pred             CEEEEcCCcCCCC-----CCCHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCchHHHHHHHHHHHHHccCCC
Confidence            9999999975431     12222   34778888888888887765   234555554432222            1223


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHC
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELG  187 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~  187 (280)
                      .....+.+-.--..+...+++.+.
T Consensus       147 ~~rviG~~~Ld~~r~~~~la~~l~  170 (326)
T 1smk_A          147 PKRLLGVTMLDVVRANTFVAEVLG  170 (326)
T ss_dssp             TTSEEECCHHHHHHHHHHHHHHHT
T ss_pred             cccEEEEeehHHHHHHHHHHHHhC
Confidence            334444432234555666666663

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.90  E-value=7.4e-05  Score=55.75  Aligned_cols=75  Identities=17%  Similarity=0.358  Sum_probs=56.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +++++|+|+ |.+|+.+++.|.+.|++|++++++++..+...+..    .+.++..|.++.+.+.+.      ...+.|+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~----~~~~~~~d~~~~~~l~~~------~~~~~d~   72 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI----DALVINGDCTKIKTLEDA------GIEDADM   72 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHHHHT------TTTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc----CcEEEEcCCCCHHHHHHc------CcccCCE
Confidence            457889987 99999999999999999999999887766554432    244667888887654321      1247899


Q ss_pred             EEECCC
Q 023553           98 MVNNAG  103 (280)
Q Consensus        98 li~~ag  103 (280)
                      +|.+.+
T Consensus        73 vi~~~~   78 (140)
T 1lss_A           73 YIAVTG   78 (140)
T ss_dssp             EEECCS
T ss_pred             EEEeeC
Confidence            999874

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.90  E-value=2.8e-05  Score=66.53  Aligned_cols=98  Identities=16%  Similarity=0.249  Sum_probs=65.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|++++|+|++|++|..+++.+...|++|+++++++++.+... ++.  .. ..  .|..+.++.   .+.+    +++|
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g--a~-~~--~~~~~~~~~---~~~~----~~~d  191 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALG--AE-EA--ATYAEVPER---AKAW----GGLD  191 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTT--CS-EE--EEGGGHHHH---HHHT----TSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcC--CC-EE--EECCcchhH---HHHh----cCce
Confidence            6899999999999999999999999999999999988776653 333  12 12  244441222   2222    5899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      ++|+ +|.  .  .                        .+..++.+.  .+|+++.++...+
T Consensus       192 ~vid-~g~--~--~------------------------~~~~~~~l~--~~G~~v~~g~~~~  222 (302)
T 1iz0_A          192 LVLE-VRG--K--E------------------------VEESLGLLA--HGGRLVYIGAAEG  222 (302)
T ss_dssp             EEEE-CSC--T--T------------------------HHHHHTTEE--EEEEEEEC-----
T ss_pred             EEEE-CCH--H--H------------------------HHHHHHhhc--cCCEEEEEeCCCC
Confidence            9999 874  1  1                        345566653  3589998876543

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.89  E-value=3e-05  Score=70.32  Aligned_cols=110  Identities=17%  Similarity=0.223  Sum_probs=78.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEE--ecC--------CCCHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC--HCD--------VTKEEDVCSAV   85 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~--~~D--------~~~~~~~~~~~   85 (280)
                      ..|++|+|+|++|++|...++.+...|++|+++++++++++.+ +.+..  ...+-  ..|        ..+.++..++.
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lGa--~~vi~~~~~d~~~~~~~~~~~~~~~~~~~  303 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMGA--EAIIDRNAEGYRFWKDENTQDPKEWKRFG  303 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTC--CEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhCC--cEEEecCcCcccccccccccchHHHHHHH
Confidence            3689999999999999999999999999999999888776655 44432  11111  112        24567777778


Q ss_pred             HHHHHHhC--CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           86 DLTVEKFG--TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        86 ~~~~~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      +.+.+..+  ++|++|.++|.  .                          .++..+..+  +.+|+++.+++..+
T Consensus       304 ~~i~~~t~g~g~Dvvid~~G~--~--------------------------~~~~~~~~l--~~~G~iv~~G~~~~  348 (456)
T 3krt_A          304 KRIRELTGGEDIDIVFEHPGR--E--------------------------TFGASVFVT--RKGGTITTCASTSG  348 (456)
T ss_dssp             HHHHHHHTSCCEEEEEECSCH--H--------------------------HHHHHHHHE--EEEEEEEESCCTTC
T ss_pred             HHHHHHhCCCCCcEEEEcCCc--h--------------------------hHHHHHHHh--hCCcEEEEEecCCC
Confidence            88877663  79999999973  1                          133445555  34689998876543

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.87  E-value=9.8e-05  Score=56.44  Aligned_cols=77  Identities=13%  Similarity=0.112  Sum_probs=57.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .+.++|.|+ |.+|+.+++.|.+.|+.|+++++++ +..+...+...  ..+.++..|.++++.+.+.      ...+.|
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a------~i~~ad   73 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLKKA------GIDRCR   73 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHHHH------TTTTCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc--CCCeEEEcCCCCHHHHHHc------ChhhCC
Confidence            456788886 9999999999999999999999974 54444443332  2367788999998765432      124789


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (153)
T 1id1_A           74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEecC
Confidence            9998874

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.87  E-value=0.0001  Score=64.20  Aligned_cols=77  Identities=26%  Similarity=0.376  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC--C
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG--T   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~   94 (280)
                      .|+++||+||+|++|..+++.+...|++|+++++++++.+.+.+ +.  .+ .++  |..  ++.   .+.+.+..+  +
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g--a~-~v~--~~~--~~~---~~~v~~~~~~~g  227 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VG--AD-IVL--PLE--EGW---AKAVREATGGAG  227 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HT--CS-EEE--ESS--TTH---HHHHHHHTTTSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC--Cc-EEe--cCc--hhH---HHHHHHHhCCCC
Confidence            68999999999999999999999999999999999887765543 33  12 223  322  222   333444432  6


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|+++|.
T Consensus       228 ~Dvvid~~g~  237 (342)
T 4eye_A          228 VDMVVDPIGG  237 (342)
T ss_dssp             EEEEEESCC-
T ss_pred             ceEEEECCch
Confidence            9999999984

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.83  E-value=4.4e-05  Score=58.60  Aligned_cols=81  Identities=15%  Similarity=0.168  Sum_probs=57.0

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |+-++.+++++|.|+ |.+|+.+++.|.+.|+.|++++++++..+.+.+    .....++..|.++.+.+.+.      .
T Consensus        13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----~~g~~~~~~d~~~~~~l~~~------~   81 (155)
T 2g1u_A           13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----EFSGFTVVGDAAEFETLKEC------G   81 (155)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----TCCSEEEESCTTSHHHHHTT------T
T ss_pred             hhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----cCCCcEEEecCCCHHHHHHc------C
Confidence            344567899999996 999999999999999999999999876543221    12244566888876543221      1


Q ss_pred             hCCccEEEECCC
Q 023553           92 FGTLDIMVNNAG  103 (280)
Q Consensus        92 ~g~id~li~~ag  103 (280)
                      ..+.|++|.+.+
T Consensus        82 ~~~ad~Vi~~~~   93 (155)
T 2g1u_A           82 MEKADMVFAFTN   93 (155)
T ss_dssp             GGGCSEEEECSS
T ss_pred             cccCCEEEEEeC
Confidence            237899999875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.81  E-value=0.0002  Score=62.81  Aligned_cols=105  Identities=19%  Similarity=0.231  Sum_probs=72.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--C
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   93 (280)
                      .|+++||.|+ |++|...++.....|++ |+++++++++++.+.+. .  ..+.....|-.+.+++   .+++.+..  .
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~--~~~~~~~~~~~~~~~~---~~~v~~~t~g~  251 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C--PEVVTHKVERLSAEES---AKKIVESFGGI  251 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C--TTCEEEECCSCCHHHH---HHHHHHHTSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c--hhcccccccccchHHH---HHHHHHHhCCC
Confidence            6899999998 99999999988889998 99999998887766544 3  2333344554555554   34444444  3


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      ++|++|.++|..                           ...+..++.+  +.+|+++.++...
T Consensus       252 g~Dvvid~~g~~---------------------------~~~~~~~~~l--~~~G~iv~~G~~~  286 (363)
T 3m6i_A          252 EPAVALECTGVE---------------------------SSIAAAIWAV--KFGGKVFVIGVGK  286 (363)
T ss_dssp             CCSEEEECSCCH---------------------------HHHHHHHHHS--CTTCEEEECCCCC
T ss_pred             CCCEEEECCCCh---------------------------HHHHHHHHHh--cCCCEEEEEccCC
Confidence            799999999731                           0134455555  4569999887543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.79  E-value=7.1e-05  Score=65.85  Aligned_cols=76  Identities=14%  Similarity=0.130  Sum_probs=58.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++-+.++|+|.|| |++|+.+++.|++ .+.|.+.+++.+.+++..+      ....+.+|+.|.+++.++++       
T Consensus        12 ~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~------~~~~~~~d~~d~~~l~~~~~-------   76 (365)
T 3abi_A           12 IEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE------FATPLKVDASNFDKLVEVMK-------   76 (365)
T ss_dssp             ----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT------TSEEEECCTTCHHHHHHHHT-------
T ss_pred             ccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc------cCCcEEEecCCHHHHHHHHh-------
Confidence            3345557999998 9999999999976 4789999999887766532      34567899999998776665       


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      +.|+||++++.
T Consensus        77 ~~DvVi~~~p~   87 (365)
T 3abi_A           77 EFELVIGALPG   87 (365)
T ss_dssp             TCSEEEECCCG
T ss_pred             CCCEEEEecCC
Confidence            78999999864

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.79  E-value=7e-05  Score=65.81  Aligned_cols=78  Identities=17%  Similarity=0.232  Sum_probs=57.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+++++++|+|+ |++|+.+++.+...|++|++++|+.++++.+.+....  .+..+   ..+.+++.+.+       .+
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~--~~~~~---~~~~~~~~~~~-------~~  230 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS--RVELL---YSNSAEIETAV-------AE  230 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG--GSEEE---ECCHHHHHHHH-------HT
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc--eeEee---eCCHHHHHHHH-------cC
Confidence            367899999999 9999999999999999999999999887776554332  12121   22344433222       27


Q ss_pred             ccEEEECCCCC
Q 023553           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 id~li~~ag~~  105 (280)
                      .|++|++++..
T Consensus       231 ~DvVI~~~~~~  241 (361)
T 1pjc_A          231 ADLLIGAVLVP  241 (361)
T ss_dssp             CSEEEECCCCT
T ss_pred             CCEEEECCCcC
Confidence            99999999864

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.79  E-value=8.7e-05  Score=62.83  Aligned_cols=76  Identities=12%  Similarity=0.213  Sum_probs=57.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+.+.....+.....+  +   +          .
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~--~---l----------~  185 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE--Q---L----------K  185 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG--G---C----------C
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH--H---h----------c
Confidence            3578999999998 6999999999999996 8999999999888887776533333333221  1   1          0


Q ss_pred             CCccEEEECCCCC
Q 023553           93 GTLDIMVNNAGIS  105 (280)
Q Consensus        93 g~id~li~~ag~~  105 (280)
                      ...|++||+....
T Consensus       186 ~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 QSYDVIINSTSAS  198 (281)
T ss_dssp             SCEEEEEECSCCC
T ss_pred             CCCCEEEEcCcCC
Confidence            3789999987653

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.74  E-value=0.00012  Score=61.59  Aligned_cols=75  Identities=19%  Similarity=0.233  Sum_probs=57.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+.++.+++.+.+.. ..+....  ..+   +.       .  
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~~~~~~~--~~~---l~-------~--  179 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-SRLRISR--YEA---LE-------G--  179 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-TTEEEEC--SGG---GT-------T--
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-CCeeEee--HHH---hc-------c--
Confidence            4578999999998 6999999999999996 899999999998888887764 3344332  221   10       0  


Q ss_pred             CCccEEEECCCC
Q 023553           93 GTLDIMVNNAGI  104 (280)
Q Consensus        93 g~id~li~~ag~  104 (280)
                      ...|++||+...
T Consensus       180 ~~~DivInaTp~  191 (272)
T 3pwz_A          180 QSFDIVVNATSA  191 (272)
T ss_dssp             CCCSEEEECSSG
T ss_pred             cCCCEEEECCCC
Confidence            378999999754

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.73  E-value=3.4e-05  Score=65.97  Aligned_cols=38  Identities=24%  Similarity=0.272  Sum_probs=32.4

Q ss_pred             ccCCcE-EEEEcCC------------------ChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           15 RLVGRV-ALITGGA------------------TGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        15 ~l~~k~-vlItGas------------------~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      ++.||+ ||||+|.                  |-.|.++|+.+++.|+.|+++.+..
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            478888 9999554                  4499999999999999999998853

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.69  E-value=5.4e-05  Score=66.08  Aligned_cols=101  Identities=18%  Similarity=0.316  Sum_probs=69.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--C
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   93 (280)
                      .|++++|+|+ |++|...++.+...|+ +|+++++++++++.+. .+..  + .+  .|..+++ +   .+.+.+..  .
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga--~-~~--~~~~~~~-~---~~~v~~~~~g~  235 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGA--D-YV--INPFEED-V---VKEVMDITDGN  235 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTC--S-EE--ECTTTSC-H---HHHHHHHTTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCC--C-EE--ECCCCcC-H---HHHHHHHcCCC
Confidence            7899999999 9999999999999999 8999999987766543 3431  1 12  2444332 2   23333333  2


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      ++|++|+++|..                           ..++.+++.+.  ..|+++.+++..
T Consensus       236 g~D~vid~~g~~---------------------------~~~~~~~~~l~--~~G~iv~~g~~~  270 (348)
T 2d8a_A          236 GVDVFLEFSGAP---------------------------KALEQGLQAVT--PAGRVSLLGLYP  270 (348)
T ss_dssp             CEEEEEECSCCH---------------------------HHHHHHHHHEE--EEEEEEECCCCS
T ss_pred             CCCEEEECCCCH---------------------------HHHHHHHHHHh--cCCEEEEEccCC
Confidence            699999999731                           12455666663  368999988754

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.68  E-value=7.4e-05  Score=64.35  Aligned_cols=145  Identities=16%  Similarity=0.137  Sum_probs=88.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEec--CcchHHH----HHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGA--KVCIADV--QDNLGQQ----VCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r--~~~~~~~----~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++||||+|.+|..++..|+..|.  .+.++++  +.++.+.    +.+..... ..+.+...|  +  ++       .+
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l-------~~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--EN-------LR   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TC-------GG
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--ch-------HH
Confidence            689999999999999999998875  4788888  5443332    11111111 122222111  0  01       11


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc--------cccC
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG--------AIGG  162 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~--------~~~~  162 (280)
                      .+...|++|+.||....+     ..+.   .+.+..|+.....+++.+..+   . ++.++++|.-..        ..+.
T Consensus        71 al~gaD~Vi~~Ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~---~-~~~vlv~SNPv~~~t~~~~k~~~~  138 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKE-----GMSR---MDLAKTNAKIVGKYAKKIAEI---C-DTKIFVITNPVDVMTYKALVDSKF  138 (313)
T ss_dssp             GGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---C-CCEEEECSSSHHHHHHHHHHHHCC
T ss_pred             HhCCCCEEEECCCCCCCC-----CCcH---HHHHHHHHHHHHHHHHHHHHh---C-CeEEEEecCcHHHHHHHHHHhhCc
Confidence            234899999999975421     2333   345888999888888888775   3 455555543222        1124


Q ss_pred             CCCccchh-hHHHHHHHHHHHHHHHC
Q 023553          163 LGPHAYTG-SKHAVLGLNKNVAAELG  187 (280)
Q Consensus       163 ~~~~~Y~~-sK~al~~~~~~la~e~~  187 (280)
                      |....++. +..-...+...+++.+.
T Consensus       139 p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          139 ERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             ChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            44566777 66557777778887774

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.67  E-value=0.00011  Score=64.41  Aligned_cols=102  Identities=25%  Similarity=0.299  Sum_probs=69.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   95 (280)
                      .|++++|+||+|++|..+++.+...|++|+++++++++++.+.+ +.  .+ ..+  |..+.+ +.   +.+.+.. +++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~G--a~-~~~--~~~~~~-~~---~~~~~~~~~g~  232 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LG--CD-RPI--NYKTEP-VG---TVLKQEYPEGV  232 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT--CS-EEE--ETTTSC-HH---HHHHHHCTTCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-cC--Cc-EEE--ecCChh-HH---HHHHHhcCCCC
Confidence            68999999999999999999999999999999999877665543 33  22 222  333322 22   2222222 379


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      |++|+++|.  .                          ..+.+++.+.  .+|+++.+++..+
T Consensus       233 D~vid~~g~--~--------------------------~~~~~~~~l~--~~G~iv~~g~~~~  265 (362)
T 2c0c_A          233 DVVYESVGG--A--------------------------MFDLAVDALA--TKGRLIVIGFISG  265 (362)
T ss_dssp             EEEEECSCT--H--------------------------HHHHHHHHEE--EEEEEEECCCGGG
T ss_pred             CEEEECCCH--H--------------------------HHHHHHHHHh--cCCEEEEEeCCCC
Confidence            999999972  0                          1334556663  3689999887654

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.62  E-value=0.00012  Score=57.60  Aligned_cols=78  Identities=14%  Similarity=0.063  Sum_probs=58.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++.+++++|.| .|.+|+.+++.|.+. |+.|++++++++..+.+.+ .    .+.++..|.++++.+.++     ....
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~----g~~~~~gd~~~~~~l~~~-----~~~~  104 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-E----GRNVISGDATDPDFWERI-----LDTG  104 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-T----TCCEEECCTTCHHHHHTB-----CSCC
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-C----CCCEEEcCCCCHHHHHhc-----cCCC
Confidence            45677888888 599999999999999 9999999999887766543 1    234567899887654322     0124


Q ss_pred             CccEEEECCC
Q 023553           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~id~li~~ag  103 (280)
                      +.|++|.+.+
T Consensus       105 ~ad~vi~~~~  114 (183)
T 3c85_A          105 HVKLVLLAMP  114 (183)
T ss_dssp             CCCEEEECCS
T ss_pred             CCCEEEEeCC
Confidence            7899998764

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.60  E-value=0.00022  Score=62.59  Aligned_cols=101  Identities=21%  Similarity=0.274  Sum_probs=68.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-C-C
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G-T   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-~   94 (280)
                      .|+++||+| +|++|...++.+...|++|+++++++++++.+ +++..  + .++  | .+.+++   .+.+.+.. + +
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa--~-~vi--~-~~~~~~---~~~v~~~~~g~g  257 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FALGA--D-HGI--N-RLEEDW---VERVYALTGDRG  257 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTC--S-EEE--E-TTTSCH---HHHHHHHHTTCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHcCC--C-EEE--c-CCcccH---HHHHHHHhCCCC
Confidence            689999999 89999999999999999999999998877664 44432  2 222  3 222222   22333333 2 7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      +|++|.++|.  .  .                        ++..+..+  +.+|+++.++...+
T Consensus       258 ~D~vid~~g~--~--~------------------------~~~~~~~l--~~~G~iv~~G~~~~  291 (363)
T 3uog_A          258 ADHILEIAGG--A--G------------------------LGQSLKAV--APDGRISVIGVLEG  291 (363)
T ss_dssp             EEEEEEETTS--S--C------------------------HHHHHHHE--EEEEEEEEECCCSS
T ss_pred             ceEEEECCCh--H--H------------------------HHHHHHHh--hcCCEEEEEecCCC
Confidence            9999999982  1  0                        23455555  34689999876554

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.60  E-value=0.00023  Score=61.97  Aligned_cols=77  Identities=16%  Similarity=0.248  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   95 (280)
                      +|++++|+||+|++|...++.+...|++|+++++++++++.+.+ +.  .+ .++  |..+  +.   .+.+.+.. +++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG--a~-~vi--~~~~--~~---~~~~~~~~~~g~  218 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MG--AD-IVL--NHKE--SL---LNQFKTQGIELV  218 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HT--CS-EEE--CTTS--CH---HHHHHHHTCCCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC--Cc-EEE--ECCc--cH---HHHHHHhCCCCc
Confidence            69999999999999999999999999999999998887766544 43  12 222  3332  22   23333333 379


Q ss_pred             cEEEECCCC
Q 023553           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |++|+++|.
T Consensus       219 Dvv~d~~g~  227 (346)
T 3fbg_A          219 DYVFCTFNT  227 (346)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCc
Confidence            999999873

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.59  E-value=0.00014  Score=63.27  Aligned_cols=76  Identities=22%  Similarity=0.350  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|+++||+||+|++|...++.+...|++|+++ +++++++.+ +++.  ...    +| .+.+ ..+.+.+... -.++|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~lG--a~~----i~-~~~~-~~~~~~~~~~-~~g~D  218 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDLG--ATP----ID-ASRE-PEDYAAEHTA-GQGFD  218 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHHT--SEE----EE-TTSC-HHHHHHHHHT-TSCEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHcC--CCE----ec-cCCC-HHHHHHHHhc-CCCce
Confidence            68999999999999999999999999999999 777665544 4443  121    23 2222 2222222211 13799


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|+++|
T Consensus       219 ~vid~~g  225 (343)
T 3gaz_A          219 LVYDTLG  225 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999997

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.57  E-value=0.00049  Score=51.70  Aligned_cols=74  Identities=9%  Similarity=0.036  Sum_probs=57.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .+.++|.|+ |.+|+.+++.|.+.|+.|++++++++..+.+.+     ..+.++..|.++++.+.++      ...+.|.
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-----~g~~~i~gd~~~~~~l~~a------~i~~ad~   74 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-----RGVRAVLGNAANEEIMQLA------HLECAKW   74 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-----TTCEEEESCTTSHHHHHHT------TGGGCSE
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-----cCCCEEECCCCCHHHHHhc------CcccCCE
Confidence            345777786 889999999999999999999999988776654     2456788999998765432      1237888


Q ss_pred             EEECCC
Q 023553           98 MVNNAG  103 (280)
Q Consensus        98 li~~ag  103 (280)
                      +|.+.+
T Consensus        75 vi~~~~   80 (140)
T 3fwz_A           75 LILTIP   80 (140)
T ss_dssp             EEECCS
T ss_pred             EEEECC
Confidence            888774

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.54  E-value=0.0003  Score=61.37  Aligned_cols=103  Identities=18%  Similarity=0.177  Sum_probs=66.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHH-HhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVE-KFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~-~~g~   94 (280)
                      .|++++|+|+ +++|...++.+...|++|+++++++++++.+. ++..  + .++  |..+ .+...++.+...+ .-++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa--~-~~~--~~~~~~~~~~~i~~~~~~~~g~g  240 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGA--D-VTL--VVDPAKEEESSIIERIRSAIGDL  240 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTC--S-EEE--ECCTTTSCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCC--C-EEE--cCcccccHHHHHHHHhccccCCC
Confidence            6899999997 89999999988889999999999888766543 4432  2 222  3332 2222222221110 0137


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                      +|++|+++|...                           ..+..++.+  +..|+++.++.
T Consensus       241 ~D~vid~~g~~~---------------------------~~~~~~~~l--~~~G~iv~~G~  272 (352)
T 1e3j_A          241 PNVTIDCSGNEK---------------------------CITIGINIT--RTGGTLMLVGM  272 (352)
T ss_dssp             CSEEEECSCCHH---------------------------HHHHHHHHS--CTTCEEEECSC
T ss_pred             CCEEEECCCCHH---------------------------HHHHHHHHH--hcCCEEEEEec
Confidence            999999997410                           134455655  44789998865

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.53  E-value=0.00039  Score=61.14  Aligned_cols=74  Identities=19%  Similarity=0.350  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|.++||+|+ |++|...++.+...|++|+++++++++++.+.+ +..  + .+  .|..+++.+.    ++.   +++|
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-lGa--~-~v--i~~~~~~~~~----~~~---~g~D  259 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGA--D-EV--VNSRNADEMA----AHL---KSFD  259 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTC--S-EE--EETTCHHHHH----TTT---TCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC--c-EE--eccccHHHHH----Hhh---cCCC
Confidence            6899999998 899999999888899999999999887776543 431  2 12  2555554322    221   5899


Q ss_pred             EEEECCCC
Q 023553           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|.++|.
T Consensus       260 vvid~~g~  267 (369)
T 1uuf_A          260 FILNTVAA  267 (369)
T ss_dssp             EEEECCSS
T ss_pred             EEEECCCC
Confidence            99999985

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.52  E-value=0.0016  Score=54.96  Aligned_cols=41  Identities=15%  Similarity=0.099  Sum_probs=34.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   60 (280)
                      +++.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            56777775 789999999999999999999999887665544

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.50  E-value=0.00035  Score=61.51  Aligned_cols=103  Identities=17%  Similarity=0.226  Sum_probs=67.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~   94 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.+. ++..  + .+  .|..+ .+++.+.+.++..  ++
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa--~-~v--i~~~~~~~~~~~~~~~~~~--~g  262 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGA--T-DF--VNPNDHSEPISQVLSKMTN--GG  262 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTC--C-EE--ECGGGCSSCHHHHHHHHHT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCC--c-eE--EeccccchhHHHHHHHHhC--CC
Confidence            6899999995 9999999999888999 7999999988776553 4431  2 12  23332 1123222332222  48


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCC-ceEEEEcccc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVA  157 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-g~iv~isS~~  157 (280)
                      +|++|+++|..                           ..++..+..+  +.+ |+++.++...
T Consensus       263 ~D~vid~~g~~---------------------------~~~~~~~~~l--~~~~G~iv~~G~~~  297 (374)
T 1cdo_A          263 VDFSLECVGNV---------------------------GVMRNALESC--LKGWGVSVLVGWTD  297 (374)
T ss_dssp             BSEEEECSCCH---------------------------HHHHHHHHTB--CTTTCEEEECSCCS
T ss_pred             CCEEEECCCCH---------------------------HHHHHHHHHh--hcCCcEEEEEcCCC
Confidence            99999999741                           1134555665  446 8999887644

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.50  E-value=0.00075  Score=59.53  Aligned_cols=104  Identities=17%  Similarity=0.197  Sum_probs=68.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-C-
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G-   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-   93 (280)
                      .|+++||+| +|++|...++.+...| ++|+++++++++++.+. ++.  .+ .++..+.++.+++   .+.+.+.. + 
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lG--a~-~vi~~~~~~~~~~---~~~v~~~~~g~  266 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIG--AD-LTLNRRETSVEER---RKAIMDITHGR  266 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTT--CS-EEEETTTSCHHHH---HHHHHHHTTTS
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HcC--Cc-EEEeccccCcchH---HHHHHHHhCCC
Confidence            589999999 8999999999988899 59999999988766553 443  12 2222221123333   33444433 2 


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      ++|++|.++|...                           .++..++.+.  .+|+++.++...
T Consensus       267 g~Dvvid~~g~~~---------------------------~~~~~~~~l~--~~G~iv~~G~~~  301 (380)
T 1vj0_A          267 GADFILEATGDSR---------------------------ALLEGSELLR--RGGFYSVAGVAV  301 (380)
T ss_dssp             CEEEEEECSSCTT---------------------------HHHHHHHHEE--EEEEEEECCCCS
T ss_pred             CCcEEEECCCCHH---------------------------HHHHHHHHHh--cCCEEEEEecCC
Confidence            6999999998421                           1344556653  468999887654

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.49  E-value=0.00029  Score=61.64  Aligned_cols=75  Identities=20%  Similarity=0.326  Sum_probs=54.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|++++|+|+ |++|...++.+...|++|+++++++++.+.+.+++..  +. ++  |..+.+.+       .+..+++|
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa--~~-vi--~~~~~~~~-------~~~~~g~D  246 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA--DD-YV--IGSDQAKM-------SELADSLD  246 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCC--SC-EE--ETTCHHHH-------HHSTTTEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCC--ce-ee--ccccHHHH-------HHhcCCCC
Confidence            7899999995 9999999998888999999999998877665534432  21 22  34444332       22235899


Q ss_pred             EEEECCCC
Q 023553           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|.++|.
T Consensus       247 ~vid~~g~  254 (357)
T 2cf5_A          247 YVIDTVPV  254 (357)
T ss_dssp             EEEECCCS
T ss_pred             EEEECCCC
Confidence            99999985

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.48  E-value=0.00071  Score=56.16  Aligned_cols=81  Identities=12%  Similarity=0.202  Sum_probs=58.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc-------------------chHHHHHHHhC---CCCCeEE
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD-------------------NLGQQVCQSLG---GEPDTFF   70 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~---~~~~~~~   70 (280)
                      ..+++++|+|.|+ ||+|..+++.|+..|. ++.+++++.                   ++.+.+.+.+.   +...+..
T Consensus        27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  105 (249)
T 1jw9_B           27 EALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITP  105 (249)
T ss_dssp             HHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEE
Confidence            3578999999996 6999999999999997 789999886                   55555554443   3345556


Q ss_pred             EecCCCCHHHHHHHHHHHHHHhCCccEEEECCC
Q 023553           71 CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG  103 (280)
Q Consensus        71 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag  103 (280)
                      +..++++ +.+.+++       ...|++|.+..
T Consensus       106 ~~~~~~~-~~~~~~~-------~~~DvVi~~~d  130 (249)
T 1jw9_B          106 VNALLDD-AELAALI-------AEHDLVLDCTD  130 (249)
T ss_dssp             ECSCCCH-HHHHHHH-------HTSSEEEECCS
T ss_pred             EeccCCH-hHHHHHH-------hCCCEEEEeCC
Confidence            6666653 3333333       37899998874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.47  E-value=0.0014  Score=57.17  Aligned_cols=78  Identities=17%  Similarity=0.359  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCC--CHHHHHHHHHHHHHHh-
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVT--KEEDVCSAVDLTVEKF-   92 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~-   92 (280)
                      .|++++|+|+ |++|...++.+...|+ +|+++++++++++.+ +++..  . .++  |..  +.++.   .+++.+.. 
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~-~vi--~~~~~~~~~~---~~~i~~~~~  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGA--D-LVL--QISKESPQEI---ARKVEGQLG  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC--S-EEE--ECSSCCHHHH---HHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCC--C-EEE--cCcccccchH---HHHHHHHhC
Confidence            6899999996 8999999998888999 899999988776654 34432  2 222  333  22332   23333322 


Q ss_pred             CCccEEEECCCC
Q 023553           93 GTLDIMVNNAGI  104 (280)
Q Consensus        93 g~id~li~~ag~  104 (280)
                      +++|++|.++|.
T Consensus       241 ~g~D~vid~~g~  252 (356)
T 1pl8_A          241 CKPEVTIECTGA  252 (356)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999973

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.47  E-value=7.5e-05  Score=56.49  Aligned_cols=72  Identities=11%  Similarity=0.151  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .+++++|.|+ |++|+.+++.|.+.|++|++.+|+.++.+++.+.+.    ....  +..+.++   .++       ..|
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~----~~~~--~~~~~~~---~~~-------~~D   82 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE----YEYV--LINDIDS---LIK-------NND   82 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT----CEEE--ECSCHHH---HHH-------TCS
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC----CceE--eecCHHH---Hhc-------CCC
Confidence            4899999996 999999999999999999999999988887776664    1121  2233322   222       789


Q ss_pred             EEEECCCCC
Q 023553           97 IMVNNAGIS  105 (280)
Q Consensus        97 ~li~~ag~~  105 (280)
                      ++|++.+..
T Consensus        83 ivi~at~~~   91 (144)
T 3oj0_A           83 VIITATSSK   91 (144)
T ss_dssp             EEEECSCCS
T ss_pred             EEEEeCCCC
Confidence            999998754

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.45  E-value=0.0011  Score=56.62  Aligned_cols=142  Identities=11%  Similarity=0.022  Sum_probs=83.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEec--CcchHHHHHHHhC----CCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGA--KVCIADV--QDNLGQQVCQSLG----GEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r--~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++||||+|.+|..++..|+..|.  .++++++  +.++++.....+.    ....+.+.. +  +.+           .
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~-----------a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE-----------D   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH-----------H
Confidence            689999999999999999998875  5888888  6554432222221    112223222 2  221           1


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc---------ccC
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA---------IGG  162 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~---------~~~  162 (280)
                      +...|++|+.||....+     ..+.+   +.+..|+.....+++.+..+   ..++.+++ +|-...         .+.
T Consensus        68 ~~~aDvVi~~ag~~~~~-----g~~r~---dl~~~N~~i~~~i~~~i~~~---~p~~~viv-~SNPv~~~~~~~~~~~~~  135 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP-----GQTRI---DLAGDNAPIMEDIQSSLDEH---NDDYISLT-TSNPVDLLNRHLYEAGDR  135 (303)
T ss_dssp             GTTCSEEEECCCCCCCT-----TCCHH---HHHHHHHHHHHHHHHHHHTT---CSCCEEEE-CCSSHHHHHHHHHHHSSS
T ss_pred             hCCCCEEEEcCCCCCCC-----CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCcEEEE-eCChHHHHHHHHHHHcCC
Confidence            24899999999975431     23333   34788888887777777664   23455554 443221         122


Q ss_pred             CCCccchh-hHHHHHHHHHHHHHHHC
Q 023553          163 LGPHAYTG-SKHAVLGLNKNVAAELG  187 (280)
Q Consensus       163 ~~~~~Y~~-sK~al~~~~~~la~e~~  187 (280)
                      |.....+. +..=...+...+++.+.
T Consensus       136 p~~rviG~gt~Ld~~r~~~~la~~l~  161 (303)
T 1o6z_A          136 SREQVIGFGGRLDSARFRYVLSEEFD  161 (303)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             CHHHeeecccchhHHHHHHHHHHHhC
Confidence            33344444 32234556666777664

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.42  E-value=0.00029  Score=61.13  Aligned_cols=102  Identities=18%  Similarity=0.234  Sum_probs=68.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ..|+++||+|+ |++|...++.+...|++|+++++++++.+.+ +++.  .+. .+  |..+++..    +.+.+..+++
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lG--a~~-~i--~~~~~~~~----~~~~~~~g~~  233 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLG--AEV-AV--NARDTDPA----AWLQKEIGGA  233 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTT--CSE-EE--ETTTSCHH----HHHHHHHSSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcC--CCE-EE--eCCCcCHH----HHHHHhCCCC
Confidence            37899999997 8999999999999999999999998877654 3343  222 22  43443322    2333334689


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      |++|.++|..            +               .++..++.+  +.+|+++.++...
T Consensus       234 d~vid~~g~~------------~---------------~~~~~~~~l--~~~G~iv~~G~~~  266 (340)
T 3s2e_A          234 HGVLVTAVSP------------K---------------AFSQAIGMV--RRGGTIALNGLPP  266 (340)
T ss_dssp             EEEEESSCCH------------H---------------HHHHHHHHE--EEEEEEEECSCCS
T ss_pred             CEEEEeCCCH------------H---------------HHHHHHHHh--ccCCEEEEeCCCC
Confidence            9999998731            0               134555665  3468999886543

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.42  E-value=0.00048  Score=61.38  Aligned_cols=74  Identities=16%  Similarity=0.337  Sum_probs=55.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.+++.+.++.    ..  .+..   ++.+.+       .
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~----~~--~~~~---~l~~~l-------~  226 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG----EA--VRFD---ELVDHL-------A  226 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC----EE--CCGG---GHHHHH-------H
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC----ce--ecHH---hHHHHh-------c
Confidence            478999999998 9999999999999999 899999998887666665542    11  2222   222222       2


Q ss_pred             CccEEEECCCCC
Q 023553           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~id~li~~ag~~  105 (280)
                      ..|++|++.+..
T Consensus       227 ~aDvVi~at~~~  238 (404)
T 1gpj_A          227 RSDVVVSATAAP  238 (404)
T ss_dssp             TCSEEEECCSSS
T ss_pred             CCCEEEEccCCC
Confidence            799999998643

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.38  E-value=0.00057  Score=55.33  Aligned_cols=73  Identities=19%  Similarity=0.203  Sum_probs=57.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +++|.|+ |.+|+.+++.|.+.|+.|++++++++..+.+.+..    .+.++..|.++++.+.+.      ...+.|++|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~----~~~~i~gd~~~~~~l~~a------~i~~ad~vi   70 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL----KATIIHGDGSHKEILRDA------EVSKNDVVV   70 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS----SSEEEESCTTSHHHHHHH------TCCTTCEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc----CCeEEEcCCCCHHHHHhc------CcccCCEEE
Confidence            4889996 89999999999999999999999998877665432    356788999998765432      124789998


Q ss_pred             ECCC
Q 023553          100 NNAG  103 (280)
Q Consensus       100 ~~ag  103 (280)
                      .+.+
T Consensus        71 ~~~~   74 (218)
T 3l4b_C           71 ILTP   74 (218)
T ss_dssp             ECCS
T ss_pred             EecC
Confidence            7764

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.37  E-value=0.00051  Score=60.41  Aligned_cols=79  Identities=15%  Similarity=0.228  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~   94 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++..  + .++  |..+ .+++.+.+.++..  ++
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa--~-~vi--~~~~~~~~~~~~~~~~~~--~g  261 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGA--T-ECV--NPQDYKKPIQEVLTEMSN--GG  261 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTC--S-EEE--CGGGCSSCHHHHHHHHTT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCC--c-eEe--cccccchhHHHHHHHHhC--CC
Confidence            6899999995 9999999999989999 799999998877655 34431  2 122  3332 1122222222211  47


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       262 ~D~vid~~g~  271 (374)
T 2jhf_A          262 VDFSFEVIGR  271 (374)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEEEECCCC
Confidence            9999999974

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.37  E-value=0.00053  Score=60.29  Aligned_cols=79  Identities=15%  Similarity=0.194  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~   94 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.+. ++..  . .++  |..+ .+++.+.+.++..  ++
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa--~-~vi--~~~~~~~~~~~~v~~~~~--~g  260 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGA--T-ECI--NPQDFSKPIQEVLIEMTD--GG  260 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTC--S-EEE--CGGGCSSCHHHHHHHHTT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCC--c-eEe--ccccccccHHHHHHHHhC--CC
Confidence            6899999996 9999999998888999 7999999888776553 4432  2 122  3332 1122222222211  47


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       261 ~D~vid~~g~  270 (373)
T 2fzw_A          261 VDYSFECIGN  270 (373)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCc
Confidence            9999999974

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.36  E-value=0.0021  Score=57.16  Aligned_cols=43  Identities=19%  Similarity=0.230  Sum_probs=39.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   58 (280)
                      .+.+++++|+|+ |.+|+.+++.+...|++|++++++.+.++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            478999999996 8999999999999999999999998887765

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.32  E-value=0.00066  Score=59.75  Aligned_cols=79  Identities=18%  Similarity=0.234  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~   94 (280)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+ +++..  + .++  |..+ .+++.+.+.++..  ++
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~-~vi--~~~~~~~~~~~~v~~~~~--~g  265 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KALGA--T-DCL--NPRELDKPVQDVITELTA--GG  265 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTC--S-EEE--CGGGCSSCHHHHHHHHHT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCC--c-EEE--ccccccchHHHHHHHHhC--CC
Confidence            6889999996 9999999998888999 799999998877655 34431  2 122  3332 1122222222221  48


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       266 ~Dvvid~~G~  275 (376)
T 1e3i_A          266 VDYSLDCAGT  275 (376)
T ss_dssp             BSEEEESSCC
T ss_pred             ccEEEECCCC
Confidence            9999999974

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.32  E-value=0.00049  Score=60.58  Aligned_cols=77  Identities=19%  Similarity=0.323  Sum_probs=52.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .+|++++|+||+|++|...++.+...|++|+++++ .++.+. .+++.  .+ .++  |..+.+-    .+++.+ .+++
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~-~~~lG--a~-~v~--~~~~~~~----~~~~~~-~~g~  249 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL-VRKLG--AD-DVI--DYKSGSV----EEQLKS-LKPF  249 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH-HHHTT--CS-EEE--ETTSSCH----HHHHHT-SCCB
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH-HHHcC--CC-EEE--ECCchHH----HHHHhh-cCCC
Confidence            36899999999999999999999999999998884 454443 34443  22 222  4443322    222222 2589


Q ss_pred             cEEEECCCC
Q 023553           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |++|+++|.
T Consensus       250 D~vid~~g~  258 (375)
T 2vn8_A          250 DFILDNVGG  258 (375)
T ss_dssp             SEEEESSCT
T ss_pred             CEEEECCCC
Confidence            999999984

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.31  E-value=0.0038  Score=54.77  Aligned_cols=85  Identities=20%  Similarity=0.259  Sum_probs=59.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCC-----------CCHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV-----------TKEEDVCSA   84 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----------~~~~~~~~~   84 (280)
                      +++++++|.|+ |.+|..+++.+...|++|++++++.+.++.+.+ +.    ..++..|+           ...+....-
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lG----a~~~~l~~~~~~~~gya~~~~~~~~~~~  255 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VG----AQWLDLGIDAAGEGGYARELSEAERAQQ  255 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TT----CEECCCC-------------CHHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC----CeEEeccccccccccchhhhhHHHHhhh
Confidence            57899999999 799999999999999999999999988777654 32    11222111           011222333


Q ss_pred             HHHHHHHhCCccEEEECCCCCC
Q 023553           85 VDLTVEKFGTLDIMVNNAGISG  106 (280)
Q Consensus        85 ~~~~~~~~g~id~li~~ag~~~  106 (280)
                      .+.+.+.....|++|+++.+..
T Consensus       256 ~~~l~e~l~~aDIVI~tv~iPg  277 (381)
T 3p2y_A          256 QQALEDAITKFDIVITTALVPG  277 (381)
T ss_dssp             HHHHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHHhcCCEEEECCCCCC
Confidence            4445555679999999886543

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.27  E-value=0.00011  Score=62.04  Aligned_cols=72  Identities=13%  Similarity=0.099  Sum_probs=51.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+.++.+++.+      .+...     ..++.       .+..
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~------~~~~~-----~~~~~-------~~~~  173 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL------NINKI-----NLSHA-------ESHL  173 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS------CCEEE-----CHHHH-------HHTG
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH------hcccc-----cHhhH-------HHHh
Confidence            3578999999997 7999999999999999 89999999887554432      11111     12222       2223


Q ss_pred             CCccEEEECCCC
Q 023553           93 GTLDIMVNNAGI  104 (280)
Q Consensus        93 g~id~li~~ag~  104 (280)
                      ...|++||+...
T Consensus       174 ~~aDiVInaTp~  185 (277)
T 3don_A          174 DEFDIIINTTPA  185 (277)
T ss_dssp             GGCSEEEECCC-
T ss_pred             cCCCEEEECccC
Confidence            478999999754

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.27  E-value=0.00069  Score=58.96  Aligned_cols=70  Identities=21%  Similarity=0.311  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|+++||.|+ |++|...++.+...|++|+++++++++.+.+. ++.  .+.. +    ++.+.+.          .++|
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lG--a~~v-~----~~~~~~~----------~~~D  236 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SMG--VKHF-Y----TDPKQCK----------EELD  236 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HTT--CSEE-E----SSGGGCC----------SCEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcC--CCee-c----CCHHHHh----------cCCC
Confidence            6899999997 99999999999899999999999988877553 343  2222 2    2333221          1899


Q ss_pred             EEEECCCCC
Q 023553           97 IMVNNAGIS  105 (280)
Q Consensus        97 ~li~~ag~~  105 (280)
                      ++|.++|..
T Consensus       237 ~vid~~g~~  245 (348)
T 3two_A          237 FIISTIPTH  245 (348)
T ss_dssp             EEEECCCSC
T ss_pred             EEEECCCcH
Confidence            999999853

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.20  E-value=0.00092  Score=58.76  Aligned_cols=78  Identities=21%  Similarity=0.267  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHh-C
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKF-G   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~-g   93 (280)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. ++..  + .++  |..+ .+++   .+.+.+.. +
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa--~-~vi--~~~~~~~~~---~~~i~~~t~g  260 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGA--T-ECL--NPKDYDKPI---YEVICEKTNG  260 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTC--S-EEE--CGGGCSSCH---HHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCC--c-EEE--ecccccchH---HHHHHHHhCC
Confidence            6899999995 8999999998888899 7999999888776553 4432  2 222  3322 1122   22233222 4


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus       261 g~Dvvid~~g~  271 (373)
T 1p0f_A          261 GVDYAVECAGR  271 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            89999999974

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.16  E-value=0.0004  Score=61.10  Aligned_cols=102  Identities=24%  Similarity=0.352  Sum_probs=67.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH---H-
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE---K-   91 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~-   91 (280)
                      .|+++||+|+ |++|...++.+...|+ .|+++++++++.+.. +++..  . ..  .|.++.+-    .+.+.+   . 
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~-~v--i~~~~~~~----~~~i~~~~~~~  250 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEVGA--T-AT--VDPSAGDV----VEAIAGPVGLV  250 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHTC--S-EE--ECTTSSCH----HHHHHSTTSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCC--C-EE--ECCCCcCH----HHHHHhhhhcc
Confidence            6899999998 8999999998888999 788888888776543 44432  1 12  24444322    223332   1 


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      .+++|++|.++|..                           ...+..+..+.  .+|+++.++...+
T Consensus       251 ~gg~Dvvid~~G~~---------------------------~~~~~~~~~l~--~~G~vv~~G~~~~  288 (370)
T 4ej6_A          251 PGGVDVVIECAGVA---------------------------ETVKQSTRLAK--AGGTVVILGVLPQ  288 (370)
T ss_dssp             TTCEEEEEECSCCH---------------------------HHHHHHHHHEE--EEEEEEECSCCCT
T ss_pred             CCCCCEEEECCCCH---------------------------HHHHHHHHHhc--cCCEEEEEeccCC
Confidence            14799999998731                           12345566653  4689998876543

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.15  E-value=0.00029  Score=60.78  Aligned_cols=77  Identities=18%  Similarity=0.180  Sum_probs=51.0

Q ss_pred             Cc-EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           18 GR-VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k-~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      |+ +++|+|++|++|...++.+...|++|+++++++++++.+. ++.  .+. ++  |..+.+  .+.++++.  .+++|
T Consensus       149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lG--a~~-~i--~~~~~~--~~~~~~~~--~~~~d  218 (328)
T 1xa0_A          149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLG--AKE-VL--AREDVM--AERIRPLD--KQRWA  218 (328)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTT--CSE-EE--ECC-----------CC--SCCEE
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcC--CcE-EE--ecCCcH--HHHHHHhc--CCccc
Confidence            44 7999999999999999999999999999999987776553 343  221 22  433332  11122221  14799


Q ss_pred             EEEECCCC
Q 023553           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|+++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999984

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.13  E-value=0.0023  Score=53.66  Aligned_cols=66  Identities=20%  Similarity=0.209  Sum_probs=51.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.+++. ++.    +...  +..+.              ...|+
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~----~~~~--~~~~l--------------~~~Di  175 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG----CDCF--MEPPK--------------SAFDL  175 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT----CEEE--SSCCS--------------SCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC----CeEe--cHHHh--------------ccCCE
Confidence            899999997 89999999999999999999999999888877 544    2222  22211              17899


Q ss_pred             EEECCCCC
Q 023553           98 MVNNAGIS  105 (280)
Q Consensus        98 li~~ag~~  105 (280)
                      +||+....
T Consensus       176 VInaTp~G  183 (269)
T 3phh_A          176 IINATSAS  183 (269)
T ss_dssp             EEECCTTC
T ss_pred             EEEcccCC
Confidence            99997654

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.12  E-value=0.00056  Score=59.44  Aligned_cols=100  Identities=17%  Similarity=0.209  Sum_probs=66.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .|++++|+|+ |++|...++.+...|+ +|+++++++++++.+.+ +   .. .+  .|..++ ++.+.+.++.  -+++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l---a~-~v--~~~~~~-~~~~~~~~~~--~~g~  232 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y---AD-RL--VNPLEE-DLLEVVRRVT--GSGV  232 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T---CS-EE--ECTTTS-CHHHHHHHHH--SSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---HH-hc--cCcCcc-CHHHHHHHhc--CCCC
Confidence            7899999999 9999999999888999 89999998776543322 2   11 12  244432 2222222222  2479


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccc
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV  156 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~  156 (280)
                      |++|+++|..                           ...+..++.+.  ..|+++.++..
T Consensus       233 D~vid~~g~~---------------------------~~~~~~~~~l~--~~G~iv~~g~~  264 (343)
T 2dq4_A          233 EVLLEFSGNE---------------------------AAIHQGLMALI--PGGEARILGIP  264 (343)
T ss_dssp             EEEEECSCCH---------------------------HHHHHHHHHEE--EEEEEEECCCC
T ss_pred             CEEEECCCCH---------------------------HHHHHHHHHHh--cCCEEEEEecC
Confidence            9999999731                           11345566663  36899988763

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.10  E-value=0.0012  Score=57.73  Aligned_cols=81  Identities=12%  Similarity=0.083  Sum_probs=51.6

Q ss_pred             CC-cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH---HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           17 VG-RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG---QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        17 ~~-k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .| ++++|+||+|++|...++.....|++|+++.++.+++   .+..+++..  +. ++  |..+. ....+.+++.+..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa--~~-vi--~~~~~-~~~~~~~~i~~~t  239 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA--TQ-VI--TEDQN-NSREFGPTIKEWI  239 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC--SE-EE--EHHHH-HCGGGHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCC--eE-EE--ecCcc-chHHHHHHHHHHh
Confidence            57 9999999999999999998888999999988776542   223344432  21 22  21110 0011223333222


Q ss_pred             ----CCccEEEECCC
Q 023553           93 ----GTLDIMVNNAG  103 (280)
Q Consensus        93 ----g~id~li~~ag  103 (280)
                          +++|++|.++|
T Consensus       240 ~~~~~g~Dvvid~~G  254 (364)
T 1gu7_A          240 KQSGGEAKLALNCVG  254 (364)
T ss_dssp             HHHTCCEEEEEESSC
T ss_pred             hccCCCceEEEECCC
Confidence                47999999997

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.10  E-value=0.0028  Score=55.62  Aligned_cols=78  Identities=13%  Similarity=0.057  Sum_probs=54.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   94 (280)
                      ..|++++|.|+++++|...++.....|++|+.+. ++++++ ..+++..  . .++  |..+++-    .+.+.+.. ++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~lGa--~-~vi--~~~~~~~----~~~v~~~t~g~  231 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSRGA--E-EVF--DYRAPNL----AQTIRTYTKNN  231 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHTTC--S-EEE--ETTSTTH----HHHHHHHTTTC
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHcCC--c-EEE--ECCCchH----HHHHHHHccCC
Confidence            5789999999999999999999999999998886 555554 4455542  2 222  4444322    23343333 46


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       232 ~d~v~d~~g~  241 (371)
T 3gqv_A          232 LRYALDCITN  241 (371)
T ss_dssp             CCEEEESSCS
T ss_pred             ccEEEECCCc
Confidence            9999999984

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=97.07  E-value=0.00077  Score=58.77  Aligned_cols=102  Identities=13%  Similarity=0.165  Sum_probs=67.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC-
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   93 (280)
                      ..|++++|+|+ |++|...++.+...|+ +|+++++++++++.+ +++..  + .++  |..+.+    +.+++.+..+ 
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa--~-~vi--~~~~~~----~~~~v~~~t~g  233 (352)
T 3fpc_A          165 KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEYGA--T-DII--NYKNGD----IVEQILKATDG  233 (352)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHHTC--C-EEE--CGGGSC----HHHHHHHHTTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCC--c-eEE--cCCCcC----HHHHHHHHcCC
Confidence            36899999985 8999999998888899 799999988776544 44432  1 222  333322    2334444432 


Q ss_pred             -CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           94 -TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        94 -~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                       ++|++|.++|...                           ..+..++.+  +.+|+++.++...
T Consensus       234 ~g~D~v~d~~g~~~---------------------------~~~~~~~~l--~~~G~~v~~G~~~  269 (352)
T 3fpc_A          234 KGVDKVVIAGGDVH---------------------------TFAQAVKMI--KPGSDIGNVNYLG  269 (352)
T ss_dssp             CCEEEEEECSSCTT---------------------------HHHHHHHHE--EEEEEEEECCCCC
T ss_pred             CCCCEEEECCCChH---------------------------HHHHHHHHH--hcCCEEEEecccC
Confidence             6999999987521                           134455655  3368999887543

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.06  E-value=0.0034  Score=53.88  Aligned_cols=144  Identities=17%  Similarity=0.143  Sum_probs=83.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCC-C--CeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGE-P--DTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~-~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++.|+||+|.+|..++..|++.|  ..|+++++++  .+.....+... .  ++.... ..++.++          .+..
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~-~t~d~~~----------a~~~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL-GPEQLPD----------CLKG   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE-SGGGHHH----------HHTT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec-CCCCHHH----------HhCC
Confidence            68999999999999999999988  6799999987  22222333221 1  122110 0012221          2248


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc------------cC
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI------------GG  162 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~------------~~  162 (280)
                      .|++|+.+|....+     ..+..   +.+..|+.....+.+.+.++   ..+++++++|--....            +.
T Consensus        69 aDvVvi~ag~~~~~-----g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv~~~~~i~~~~~~~~~~~  137 (314)
T 1mld_A           69 CDVVVIPAGVPRKP-----GMTRD---DLFNTNATIVATLTAACAQH---CPDAMICIISNPVNSTIPITAEVFKKHGVY  137 (314)
T ss_dssp             CSEEEECCSCCCCT-----TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEECCCcCCCC-----CCcHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCcchhHHHHHHHHHHcCCC
Confidence            99999999986432     12222   23566776666666666665   3467888876433211            12


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHC
Q 023553          163 LGPHAYTGSKHAVLGLNKNVAAELG  187 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~  187 (280)
                      |.....+.+-.=-..+...+++.+.
T Consensus       138 p~~rvig~t~Ld~~r~~~~la~~l~  162 (314)
T 1mld_A          138 NPNKIFGVTTLDIVRANAFVAELKG  162 (314)
T ss_dssp             CTTSEEECCHHHHHHHHHHHHHHTT
T ss_pred             CcceEEEeecccHHHHHHHHHHHhC
Confidence            3333444433234455556666653

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.06  E-value=0.0012  Score=58.21  Aligned_cols=81  Identities=17%  Similarity=0.229  Sum_probs=55.6

Q ss_pred             cCCcEEEEEc-CCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITG-GATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItG-as~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+|.+++|.| |++++|...++.+...|++|+++++++++++.+. ++..  +. ++  |..+++-..++.+....  .+
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa--~~-~~--~~~~~~~~~~v~~~t~~--~g  240 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGA--VH-VC--NAASPTFMQDLTEALVS--TG  240 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTC--SC-EE--ETTSTTHHHHHHHHHHH--HC
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCC--cE-EE--eCCChHHHHHHHHHhcC--CC
Confidence            4688999997 9999999999999999999999999888776554 3432  21 22  33333322222222222  27


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       241 ~d~v~d~~g~  250 (379)
T 3iup_A          241 ATIAFDATGG  250 (379)
T ss_dssp             CCEEEESCEE
T ss_pred             ceEEEECCCc
Confidence            9999999985

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.00  E-value=0.0017  Score=56.70  Aligned_cols=76  Identities=25%  Similarity=0.357  Sum_probs=54.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-C-
Q 023553           17 VGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G-   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-   93 (280)
                      .|++++|+|+ |++|...++.+... |++|+++++++++++.+. ++.  .+ .++  |..++  +   .+.+.+.. + 
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lG--a~-~vi--~~~~~--~---~~~v~~~~~g~  253 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLG--AD-HVV--DARRD--P---VKQVMELTRGR  253 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTT--CS-EEE--ETTSC--H---HHHHHHHTTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhC--CC-EEE--eccch--H---HHHHHHHhCCC
Confidence            6899999999 89999999988888 999999999988766553 443  22 222  44443  2   22232222 3 


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus       254 g~Dvvid~~G~  264 (359)
T 1h2b_A          254 GVNVAMDFVGS  264 (359)
T ss_dssp             CEEEEEESSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999984

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.00  E-value=0.0013  Score=53.75  Aligned_cols=73  Identities=15%  Similarity=0.149  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ..+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+.+.      ..+.++..|.++++.+.+.      ...+.|
T Consensus         8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~------~~~~~i~gd~~~~~~l~~a------~i~~ad   73 (234)
T 2aef_A            8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR------SGANFVHGDPTRVSDLEKA------NVRGAR   73 (234)
T ss_dssp             --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH------TTCEEEESCTTCHHHHHHT------TCTTCS
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh------cCCeEEEcCCCCHHHHHhc------Ccchhc
Confidence            3567888887 8999999999999999 999999988765543      1366788999988765432      123678


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (234)
T 2aef_A           74 AVIVDLE   80 (234)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            8887653

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.98  E-value=0.00094  Score=58.42  Aligned_cols=75  Identities=21%  Similarity=0.278  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|+++||+|+ |++|...++.+...|++|+++++++++++.+.+ +.  .+ .++  |..++.+   +.+.+.   +++|
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lG--a~-~v~--~~~~~~~---~~~~~~---~~~D  245 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MG--AD-HYI--ATLEEGD---WGEKYF---DTFD  245 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HT--CS-EEE--EGGGTSC---HHHHSC---SCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cC--CC-EEE--cCcCchH---HHHHhh---cCCC
Confidence            6899999999 999999999988899999999999887765543 43  12 122  3222201   122221   5899


Q ss_pred             EEEECCCC
Q 023553           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|.++|.
T Consensus       246 ~vid~~g~  253 (360)
T 1piw_A          246 LIVVCASS  253 (360)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCC
Confidence            99999986

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.96  E-value=0.0032  Score=55.74  Aligned_cols=84  Identities=24%  Similarity=0.329  Sum_probs=56.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecC----------------CCCHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD----------------VTKEE   79 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D----------------~~~~~   79 (280)
                      +.+.+|+|.|+ |.+|..+++.+...|++|++++++.+.++...+ +..    .++..+                ++++.
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G~----~~~~~~~~~~~d~~~~~~ya~e~s~~~  261 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LGA----KFIAVEDEEFKAAETAGGYAKEMSGEY  261 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TTC----EECCCCC-----------------CHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCC----ceeecccccccccccccchhhhcchhh
Confidence            57899999999 799999999999999999999999988776654 321    122221                22221


Q ss_pred             HHHHHHHHHHHHhCCccEEEECCCCCC
Q 023553           80 DVCSAVDLTVEKFGTLDIMVNNAGISG  106 (280)
Q Consensus        80 ~~~~~~~~~~~~~g~id~li~~ag~~~  106 (280)
                       ...-.+.+.+....-|++|+++.+..
T Consensus       262 -~~~~~~~l~e~l~~aDVVI~tvlipg  287 (405)
T 4dio_A          262 -QVKQAALVAEHIAKQDIVITTALIPG  287 (405)
T ss_dssp             -HHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred             -hhhhHhHHHHHhcCCCEEEECCcCCC
Confidence             11112233333458999999987654

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.91  E-value=0.0019  Score=56.05  Aligned_cols=101  Identities=14%  Similarity=0.233  Sum_probs=66.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKH--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .|+++||+|+ +++|...++.+...  |++|+++++++++.+.+. ++..  + .++  |..+.+   ..++++.+ -.+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa--~-~vi--~~~~~~---~~~~~~~~-g~g  238 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGA--D-YVS--EMKDAE---SLINKLTD-GLG  238 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTC--S-EEE--CHHHHH---HHHHHHHT-TCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCC--C-EEe--ccccch---HHHHHhhc-CCC
Confidence            7899999999 89999999998889  999999999888776553 3431  2 122  322201   12233322 127


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      +|++|.++|..                           ...+..++.+.  .+|+++.++...
T Consensus       239 ~D~vid~~g~~---------------------------~~~~~~~~~l~--~~G~iv~~g~~~  272 (344)
T 2h6e_A          239 ASIAIDLVGTE---------------------------ETTYNLGKLLA--QEGAIILVGMEG  272 (344)
T ss_dssp             EEEEEESSCCH---------------------------HHHHHHHHHEE--EEEEEEECCCCS
T ss_pred             ccEEEECCCCh---------------------------HHHHHHHHHhh--cCCEEEEeCCCC
Confidence            99999999731                           12345556663  368999887643

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.89  E-value=0.021  Score=49.16  Aligned_cols=113  Identities=14%  Similarity=0.081  Sum_probs=71.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC-----CCeEEEecCCCCHHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE-----PDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ..+++.|+|+ |.+|..++..|+..|.  .|+++++++++++.....+...     ..+.....|   .+          
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~----------   69 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE----------   69 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH----------
Confidence            4678999996 9999999999999987  7999999887666533333211     122332222   11          


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                       .+..-|++|..+|....+     ..+..   +.++.|+.-...+.+.+..+   ..++.+++++-
T Consensus        70 -a~~~aDvVvi~ag~p~kp-----G~~R~---dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtN  123 (326)
T 3pqe_A           70 -DCKDADIVCICAGANQKP-----GETRL---ELVEKNLKIFKGIVSEVMAS---GFDGIFLVATN  123 (326)
T ss_dssp             -GGTTCSEEEECCSCCCCT-----TCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECSS
T ss_pred             -HhCCCCEEEEecccCCCC-----CccHH---HHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCC
Confidence             234889999999975331     23332   34566665555555555553   34577777764

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.88  E-value=0.0021  Score=57.09  Aligned_cols=78  Identities=27%  Similarity=0.431  Sum_probs=54.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-C
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   93 (280)
                      ..|+++||+|+ |++|...++.+...|+ .|+++++++++++.+ +++.  .+ .++  |..+.+-    .+.+.+.. +
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lG--a~-~vi--~~~~~~~----~~~i~~~t~g  280 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELG--AD-HVI--DPTKENF----VEAVLDYTNG  280 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHT--CS-EEE--CTTTSCH----HHHHHHHTTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcC--CC-EEE--cCCCCCH----HHHHHHHhCC
Confidence            36899999998 8999999999888999 899999888776654 4443  12 122  4333322    33444433 2


Q ss_pred             -CccEEEECCCC
Q 023553           94 -TLDIMVNNAGI  104 (280)
Q Consensus        94 -~id~li~~ag~  104 (280)
                       ++|++|.++|.
T Consensus       281 ~g~D~vid~~g~  292 (404)
T 3ip1_A          281 LGAKLFLEATGV  292 (404)
T ss_dssp             CCCSEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence             69999999984

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.86  E-value=0.002  Score=56.41  Aligned_cols=77  Identities=21%  Similarity=0.264  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   94 (280)
                      .|+++||+||+|++|...++.+.. .|++|+++++++++++.+. ++.  .+. ++  |..+  +.   .+.+.+.. ++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~lG--ad~-vi--~~~~--~~---~~~v~~~~~~g  239 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SLG--AHH-VI--DHSK--PL---AAEVAALGLGA  239 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HTT--CSE-EE--CTTS--CH---HHHHHTTCSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HcC--CCE-EE--eCCC--CH---HHHHHHhcCCC
Confidence            689999999999999998887766 5899999999988776553 343  221 22  3333  12   23333322 47


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       240 ~Dvvid~~g~  249 (363)
T 4dvj_A          240 PAFVFSTTHT  249 (363)
T ss_dssp             EEEEEECSCH
T ss_pred             ceEEEECCCc
Confidence            9999999873

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.78  E-value=0.0024  Score=55.44  Aligned_cols=114  Identities=16%  Similarity=0.107  Sum_probs=68.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC---CC-CCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG---GE-PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++++.|+|++|.+|..++..++..|.  .|++++.++++++.....+.   .. .++.+ .   ++..          +
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d~~----------~   72 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SDIK----------E   72 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SCHH----------H
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CCHH----------H
Confidence            467899999999999999999999984  79999998876554333222   11 12221 1   1221          1


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCce-EEEEcc
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGT-IISICS  155 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~-iv~isS  155 (280)
                      .+..-|++|..||....+     ..+.   .+.++.|+.-...+.+.+..+   ..++. ++++|-
T Consensus        73 al~dADvVvitaG~p~kp-----G~~R---~dLl~~N~~I~~~i~~~i~~~---~p~a~~vlvvsN  127 (343)
T 3fi9_A           73 ALTDAKYIVSSGGAPRKE-----GMTR---EDLLKGNAEIAAQLGKDIKSY---CPDCKHVIIIFN  127 (343)
T ss_dssp             HHTTEEEEEECCC------------CH---HHHHHHHHHHHHHHHHHHHHH---CTTCCEEEECSS
T ss_pred             HhCCCCEEEEccCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHh---ccCcEEEEEecC
Confidence            124899999999975321     2233   344566666555555555554   34564 666653

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.78  E-value=0.0014  Score=55.27  Aligned_cols=70  Identities=7%  Similarity=0.197  Sum_probs=52.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+.+      ..+.     .++       +.+ .
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~------~~~~-----~~~-------l~~-l  177 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF------KVIS-----YDE-------LSN-L  177 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS------EEEE-----HHH-------HTT-C
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc------Cccc-----HHH-------HHh-c
Confidence            4578999999997 6999999999999998 8999999998876665432      1111     122       212 3


Q ss_pred             CCccEEEECCCC
Q 023553           93 GTLDIMVNNAGI  104 (280)
Q Consensus        93 g~id~li~~ag~  104 (280)
                       ..|++||+...
T Consensus       178 -~~DivInaTp~  188 (282)
T 3fbt_A          178 -KGDVIINCTPK  188 (282)
T ss_dssp             -CCSEEEECSST
T ss_pred             -cCCEEEECCcc
Confidence             78999999754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.75  E-value=0.015  Score=50.14  Aligned_cols=116  Identities=13%  Similarity=0.135  Sum_probs=66.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .+..++++.|+|+ |.+|..++..|+..|.  .++++++++++++.....+...    ..+.....|   .         
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~---------   71 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y---------   71 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G---------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H---------
Confidence            4567789999996 9999999999999987  7999999887766544443221    122322221   1         


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                        +.+..-|++|..||....+     ..+.   .+.++.|+.-...+.+.+..+   ..++.+++++-
T Consensus        72 --~a~~~aDiVvi~ag~~~kp-----G~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~ilvvtN  126 (326)
T 3vku_A           72 --SDAKDADLVVITAGAPQKP-----GETR---LDLVNKNLKILKSIVDPIVDS---GFNGIFLVAAN  126 (326)
T ss_dssp             --GGGTTCSEEEECCCCC------------------------CHHHHHHHHHTT---TCCSEEEECSS
T ss_pred             --HHhcCCCEEEECCCCCCCC-----CchH---HHHHHHHHHHHHHHHHHHHhc---CCceEEEEccC
Confidence              1234899999999975321     1222   344556655555455555443   34677777764

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.73  E-value=0.014  Score=49.35  Aligned_cols=89  Identities=15%  Similarity=0.188  Sum_probs=61.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc------------------chHHHHH---HHhCCCCCeEEE
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD------------------NLGQQVC---QSLGGEPDTFFC   71 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~------------------~~~~~~~---~~~~~~~~~~~~   71 (280)
                      ..|++++|+|.|+ ||+|..++..|+..|. ++.+++.+.                  .+.+.+.   +.+.+..++..+
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            4578999999986 7999999999999996 588888764                  3333333   333445567777


Q ss_pred             ecCCCCHHHHHHHHHHHHHH----hCCccEEEECCC
Q 023553           72 HCDVTKEEDVCSAVDLTVEK----FGTLDIMVNNAG  103 (280)
Q Consensus        72 ~~D~~~~~~~~~~~~~~~~~----~g~id~li~~ag  103 (280)
                      ..++++.+.+..+++.+...    ....|++|.+..
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            77888766666665544221    137898887663

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.68  E-value=0.0056  Score=54.05  Aligned_cols=45  Identities=22%  Similarity=0.186  Sum_probs=39.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   60 (280)
                      ++.+++++|+|+ |++|+.+++.+...|++|++++++.+.++...+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~  213 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES  213 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            578999999996 899999999999999999999999887766543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.68  E-value=0.0018  Score=56.99  Aligned_cols=78  Identities=17%  Similarity=0.242  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHh-C
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKF-G   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~-g   93 (280)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+ +++.  .+ .++  |..+ .+++   .+.+.+.. +
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~lG--a~-~vi--~~~~~~~~~---~~~i~~~~~g  262 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKFG--VN-EFV--NPKDHDKPI---QEVIVDLTDG  262 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTTT--CC-EEE--CGGGCSSCH---HHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcC--Cc-EEE--ccccCchhH---HHHHHHhcCC
Confidence            6889999998 9999999999989999 799999998887644 3333  12 122  3321 1222   22333332 4


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus       263 g~D~vid~~g~  273 (378)
T 3uko_A          263 GVDYSFECIGN  273 (378)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            89999999974

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.66  E-value=0.018  Score=49.67  Aligned_cols=80  Identities=15%  Similarity=0.175  Sum_probs=50.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeE-EEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~V-i~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ..|++++|.|+ |++|...++.+...|+.+ +++++++++++. ++++..  . ..+..+-.+..+   ..+.+. ....
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~-a~~lGa--~-~~i~~~~~~~~~---~~~~~~-~~~g  229 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL-AKSFGA--M-QTFNSSEMSAPQ---MQSVLR-ELRF  229 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHHTTC--S-EEEETTTSCHHH---HHHHHG-GGCS
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH-HHHcCC--e-EEEeCCCCCHHH---HHHhhc-ccCC
Confidence            47899999987 899999999888999875 566777766543 344432  2 233222222222   222222 2257


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      .|+++.++|.
T Consensus       230 ~d~v~d~~G~  239 (346)
T 4a2c_A          230 NQLILETAGV  239 (346)
T ss_dssp             SEEEEECSCS
T ss_pred             cccccccccc
Confidence            8999999874

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.65  E-value=0.0035  Score=54.69  Aligned_cols=98  Identities=14%  Similarity=0.201  Sum_probs=65.0

Q ss_pred             CcEEEEEcCCChHHHHH-HHHH-HHcCCe-EEEEecCcc---hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGEST-VRLF-HKHGAK-VCIADVQDN---LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGas~giG~~i-a~~l-~~~g~~-Vi~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++++|+|+ |++|... ++.+ ...|++ |++++++++   +.+.+ +++..    ..+  |..++ ++.+ +.++   
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~lGa----~~v--~~~~~-~~~~-i~~~---  239 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EELDA----TYV--DSRQT-PVED-VPDV---  239 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHTTC----EEE--ETTTS-CGGG-HHHH---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHcCC----ccc--CCCcc-CHHH-HHHh---
Confidence            399999999 9999999 8877 677998 999999887   66554 34431    222  44432 2222 3332   


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      .+++|++|.++|...                           .++..+..+.  .+|+++.++...
T Consensus       240 ~gg~Dvvid~~g~~~---------------------------~~~~~~~~l~--~~G~iv~~g~~~  276 (357)
T 2b5w_A          240 YEQMDFIYEATGFPK---------------------------HAIQSVQALA--PNGVGALLGVPS  276 (357)
T ss_dssp             SCCEEEEEECSCCHH---------------------------HHHHHHHHEE--EEEEEEECCCCC
T ss_pred             CCCCCEEEECCCChH---------------------------HHHHHHHHHh--cCCEEEEEeCCC
Confidence            248999999997410                           1344556653  368999987654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.62  E-value=0.0059  Score=52.37  Aligned_cols=74  Identities=23%  Similarity=0.388  Sum_probs=51.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ..|++++|+||+|++|...++.+...|++|+.+.++..  .+..+++..  + .++  |..+.+...       +...++
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~--~~~~~~lGa--~-~~i--~~~~~~~~~-------~~~~g~  216 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN--HAFLKALGA--E-QCI--NYHEEDFLL-------AISTPV  216 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH--HHHHHHHTC--S-EEE--ETTTSCHHH-------HCCSCE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch--HHHHHHcCC--C-EEE--eCCCcchhh-------hhccCC
Confidence            36899999999999999999999999999998875443  334444442  2 122  333332111       122589


Q ss_pred             cEEEECCC
Q 023553           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |++|.++|
T Consensus       217 D~v~d~~g  224 (321)
T 3tqh_A          217 DAVIDLVG  224 (321)
T ss_dssp             EEEEESSC
T ss_pred             CEEEECCC
Confidence            99999987

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.60  E-value=0.0017  Score=56.77  Aligned_cols=37  Identities=11%  Similarity=0.248  Sum_probs=32.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      .|+++||.||+|++|...++.....|++|+++.++.+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            6899999999999999999988888999888776544

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.59  E-value=0.0013  Score=54.69  Aligned_cols=43  Identities=7%  Similarity=0.196  Sum_probs=36.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVC   59 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~   59 (280)
                      ++++ +++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++.
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la  149 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD  149 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            3577 8999987 8999999999999998 8999999988765543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.58  E-value=0.0091  Score=52.27  Aligned_cols=101  Identities=15%  Similarity=0.189  Sum_probs=66.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   94 (280)
                      .|+++||+|+ |++|...++.+...|+ .|+++++++++++.+ +.+..  + .++  |..+.+-    .+++.+.. ++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~-~vi--~~~~~~~----~~~~~~~~~gg  258 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGA--T-HVI--NSKTQDP----VAAIKEITDGG  258 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTC--S-EEE--ETTTSCH----HHHHHHHTTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCC--C-EEe--cCCccCH----HHHHHHhcCCC
Confidence            6889999995 8999999998888899 599999988876655 34431  2 222  3333221    23333332 47


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      +|++|.++|..                           ...+..+..+.  .+|+++.++...
T Consensus       259 ~D~vid~~g~~---------------------------~~~~~~~~~l~--~~G~iv~~G~~~  292 (371)
T 1f8f_A          259 VNFALESTGSP---------------------------EILKQGVDALG--ILGKIAVVGAPQ  292 (371)
T ss_dssp             EEEEEECSCCH---------------------------HHHHHHHHTEE--EEEEEEECCCCS
T ss_pred             CcEEEECCCCH---------------------------HHHHHHHHHHh--cCCEEEEeCCCC
Confidence            99999999731                           01344556653  368999887543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.57  E-value=0.012  Score=52.11  Aligned_cols=77  Identities=18%  Similarity=0.173  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-C-
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G-   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-   93 (280)
                      .|+++||.|+ |++|...++.+...|+ +|+++++++++++.+ +++.  .  .++  |..+.+..   .+.+.+.. + 
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lG--a--~~i--~~~~~~~~---~~~~~~~~~g~  253 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL-SDAG--F--ETI--DLRNSAPL---RDQIDQILGKP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HTTT--C--EEE--ETTSSSCH---HHHHHHHHSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcC--C--cEE--cCCCcchH---HHHHHHHhCCC
Confidence            6899999996 9999999998888899 899999998876654 3333  2  233  33332210   12222222 3 


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus       254 g~Dvvid~~g~  264 (398)
T 2dph_A          254 EVDCGVDAVGF  264 (398)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCCEEEECCCC
Confidence            69999999985

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.47  E-value=0.012  Score=50.94  Aligned_cols=115  Identities=19%  Similarity=0.160  Sum_probs=68.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--e-----EEEEecCcc--hHHHHHHHhCC-C-CCeEEEecCCCCHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGA--K-----VCIADVQDN--LGQQVCQSLGG-E-PDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~--~-----Vi~~~r~~~--~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .+++||||+|.+|..++..|+..|.  .     +++++.++.  ..+.....+.. . .....+..- .+..        
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~-~~~~--------   74 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT-DKEE--------   74 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE-SCHH--------
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEc-CCcH--------
Confidence            5799999999999999999998875  4     888998752  33333222221 1 111111111 1111        


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCc-eEEEEcc
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICS  155 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g-~iv~isS  155 (280)
                        +.+...|++|+.||....+     ..+.   .+.++.|+.....+.+.+..+   ..++ +++++|-
T Consensus        75 --~~~~daDvVvitAg~prkp-----G~tR---~dll~~N~~i~~~i~~~i~~~---~~~~~~vivvsN  130 (333)
T 5mdh_A           75 --IAFKDLDVAILVGSMPRRD-----GMER---KDLLKANVKIFKCQGAALDKY---AKKSVKVIVVGN  130 (333)
T ss_dssp             --HHTTTCSEEEECCSCCCCT-----TCCT---TTTHHHHHHHHHHHHHHHHHH---SCTTCEEEECSS
T ss_pred             --HHhCCCCEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEcCC
Confidence              1234899999999975431     1222   345666776666666666554   2345 5776664

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.44  E-value=0.0033  Score=53.90  Aligned_cols=84  Identities=17%  Similarity=0.168  Sum_probs=56.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++.||+++|.|++.-+|+.+|+.|+..|++|.++.|+........+.+.... .....+..++++++.+.+.       
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~-~~~t~~~~t~~~~L~e~l~-------  244 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK-HHVEDLGEYSEDLLKKCSL-------  244 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC-CEEEEEEECCHHHHHHHHH-------
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc-ccccccccccHhHHHHHhc-------
Confidence            37899999999999999999999999999999999988543322222222111 1111111133455544444       


Q ss_pred             CccEEEECCCCC
Q 023553           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~id~li~~ag~~  105 (280)
                      .-|++|.+.|..
T Consensus       245 ~ADIVIsAtg~p  256 (320)
T 1edz_A          245 DSDVVITGVPSE  256 (320)
T ss_dssp             HCSEEEECCCCT
T ss_pred             cCCEEEECCCCC
Confidence            789999999863

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.44  E-value=0.0061  Score=53.92  Aligned_cols=78  Identities=17%  Similarity=0.284  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC--
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG--   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   93 (280)
                      .|++|+|.|+ |++|...++.....|+ .|+++++++++++.+ +++..  +  .+  |.++.+.+   .+++.+..+  
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~--~i--~~~~~~~~---~~~v~~~t~g~  253 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGF--E--IA--DLSLDTPL---HEQIAALLGEP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC--E--EE--ETTSSSCH---HHHHHHHHSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHcCC--c--EE--ccCCcchH---HHHHHHHhCCC
Confidence            6899999995 9999999998888899 688899988877655 44432  2  22  33332222   233333332  


Q ss_pred             CccEEEECCCCC
Q 023553           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~id~li~~ag~~  105 (280)
                      ++|++|.++|..
T Consensus       254 g~Dvvid~~G~~  265 (398)
T 1kol_A          254 EVDCAVDAVGFE  265 (398)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999853

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.39  E-value=0.0082  Score=53.54  Aligned_cols=73  Identities=21%  Similarity=0.226  Sum_probs=51.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +..++|.|. |.+|+.+++.|.+.|..|++++++++..+.+.+.     .+.++..|.++++.+.++      ...+.|+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~-----g~~vi~GDat~~~~L~~a------gi~~A~~   71 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF-----GMKVFYGDATRMDLLESA------GAAKAEV   71 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT-----TCCCEESCTTCHHHHHHT------TTTTCSE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC-----CCeEEEcCCCCHHHHHhc------CCCccCE
Confidence            345888886 7799999999999999999999999887765431     234566777777654322      1125666


Q ss_pred             EEECC
Q 023553           98 MVNNA  102 (280)
Q Consensus        98 li~~a  102 (280)
                      +|.+.
T Consensus        72 viv~~   76 (413)
T 3l9w_A           72 LINAI   76 (413)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            66655

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.36  E-value=0.006  Score=48.85  Aligned_cols=41  Identities=10%  Similarity=0.263  Sum_probs=36.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   60 (280)
                      +++|+||+|.+|..+++.|++.|++|++.+|+++..+...+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   42 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAA   42 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            57899999999999999999999999999999877665544

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.34  E-value=0.0065  Score=53.15  Aligned_cols=47  Identities=17%  Similarity=0.267  Sum_probs=41.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   62 (280)
                      +++||+++|.|. |.+|+.+|+.|.+.|++|++.+++.+.+++..+..
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            689999999997 78999999999999999999999988777766654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.33  E-value=0.012  Score=50.90  Aligned_cols=102  Identities=20%  Similarity=0.293  Sum_probs=67.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC-
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   93 (280)
                      ..|++++|.|+ +++|...++.+... |++|+++++++++++.+ +++..  +. ++  |..+ +.    .+++.+..+ 
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~lGa--~~-~i--~~~~-~~----~~~v~~~t~g  237 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REVGA--DA-AV--KSGA-GA----ADAIRELTGG  237 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHTTC--SE-EE--ECST-TH----HHHHHHHHGG
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCC--CE-EE--cCCC-cH----HHHHHHHhCC
Confidence            36899999998 99999998888777 78999999998877655 34431  22 22  2222 22    233333332 


Q ss_pred             -CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           94 -TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        94 -~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                       ++|++|.++|..                           ..++..+..+  +..|+++.++...+
T Consensus       238 ~g~d~v~d~~G~~---------------------------~~~~~~~~~l--~~~G~iv~~G~~~~  274 (345)
T 3jv7_A          238 QGATAVFDFVGAQ---------------------------STIDTAQQVV--AVDGHISVVGIHAG  274 (345)
T ss_dssp             GCEEEEEESSCCH---------------------------HHHHHHHHHE--EEEEEEEECSCCTT
T ss_pred             CCCeEEEECCCCH---------------------------HHHHHHHHHH--hcCCEEEEECCCCC
Confidence             799999999741                           1244555665  34689998875543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.30  E-value=0.021  Score=47.08  Aligned_cols=77  Identities=13%  Similarity=0.214  Sum_probs=57.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           20 VALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      +++|.|++|.+|+.+++.+.+. ++.++.+......+++...   ...+   +..|++.++.....++.+.+.  +++++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~---~~~D---vvIDfT~p~a~~~~~~~a~~~--g~~~V   73 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD---GNTE---VVIDFTHPDVVMGNLEFLIDN--GIHAV   73 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH---TTCC---EEEECSCTTTHHHHHHHHHHT--TCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc---cCCc---EEEEccChHHHHHHHHHHHHc--CCCEE
Confidence            5899999999999999999876 8888766554444444333   1233   335889999888888877665  88999


Q ss_pred             EECCCC
Q 023553           99 VNNAGI  104 (280)
Q Consensus        99 i~~ag~  104 (280)
                      |...|.
T Consensus        74 igTTG~   79 (245)
T 1p9l_A           74 VGTTGF   79 (245)
T ss_dssp             ECCCCC
T ss_pred             EcCCCC
Confidence            988874

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.23  E-value=0.0069  Score=50.87  Aligned_cols=40  Identities=23%  Similarity=0.441  Sum_probs=36.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      .+++||+++|.|.++-+|+.++..|...|++|.++.|+..
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~  195 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK  195 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch
Confidence            4689999999999999999999999999999999876543

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.22  E-value=0.0054  Score=52.75  Aligned_cols=43  Identities=21%  Similarity=0.364  Sum_probs=37.2

Q ss_pred             CCc-EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHH
Q 023553           17 VGR-VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC   59 (280)
Q Consensus        17 ~~k-~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   59 (280)
                      .|+ +++|+||+|++|...++.+...|++|+++++++++++.+.
T Consensus       149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~  192 (330)
T 1tt7_A          149 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK  192 (330)
T ss_dssp             GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             CCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            354 8999999999999999999999999999999987766553

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.16  E-value=0.019  Score=46.54  Aligned_cols=43  Identities=23%  Similarity=0.413  Sum_probs=37.6

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      =|...+++||.+||.||+ .+|...++.|.+.|+.|++++.+..
T Consensus        23 ~Pifl~L~gk~VLVVGgG-~va~~ka~~Ll~~GA~VtVvap~~~   65 (223)
T 3dfz_A           23 YTVMLDLKGRSVLVVGGG-TIATRRIKGFLQEGAAITVVAPTVS   65 (223)
T ss_dssp             CEEEECCTTCCEEEECCS-HHHHHHHHHHGGGCCCEEEECSSCC
T ss_pred             cccEEEcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCCC
Confidence            356678999999999975 8999999999999999999987643

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.13  E-value=0.058  Score=46.49  Aligned_cols=115  Identities=8%  Similarity=0.053  Sum_probs=73.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCC----CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGG----EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+.+++.|+|+ |.+|..++..|+..|.  .|++++.++++.+.....+..    .........+  |.+          
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~----------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS----------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH----------
Confidence            45778999997 9999999999999987  799999988766654433321    1111222121  221          


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                       .+..-|++|..||....+     ..+..   +.++.|+.-...+.+.+..+   ..++.+++++-
T Consensus        84 -~~~~aDiVvi~aG~~~kp-----G~tR~---dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtN  137 (331)
T 4aj2_A           84 -VTANSKLVIITAGARQQE-----GESRL---NLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSN  137 (331)
T ss_dssp             -GGTTEEEEEECCSCCCCT-----TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTCEEEECSS
T ss_pred             -HhCCCCEEEEccCCCCCC-----CccHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEecC
Confidence             124899999999975432     23332   35555655555555555554   44678887774

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.11  E-value=0.02  Score=47.35  Aligned_cols=81  Identities=23%  Similarity=0.284  Sum_probs=53.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc-------------------chHHHHHHHh---CCCCCeEE
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD-------------------NLGQQVCQSL---GGEPDTFF   70 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~---~~~~~~~~   70 (280)
                      ..+++++|+|.|+ ||+|.+++..|+..|. ++.+++++.                   .+.+.+.+.+   .+..++..
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  102 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTA  102 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEE
Confidence            3578999999998 6799999999999997 577776542                   3333333333   33345555


Q ss_pred             EecCCCCHHHHHHHHHHHHHHhCCccEEEECCC
Q 023553           71 CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG  103 (280)
Q Consensus        71 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag  103 (280)
                      +..++++ +.+.++++       ..|++|++..
T Consensus       103 ~~~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          103 LQQRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             ECSCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             EeccCCH-HHHHHHHh-------cCCEEEECCC
Confidence            5555543 34433333       6799998763

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.06  E-value=0.007  Score=50.85  Aligned_cols=72  Identities=17%  Similarity=0.295  Sum_probs=52.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++++++|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.+...    +..  .+  +.+   +       ....
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g----~~~--~~--~~~---~-------~~~~  186 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFP----LEV--VN--SPE---E-------VIDK  186 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSC----EEE--CS--CGG---G-------TGGG
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcC----Cee--eh--hHH---h-------hhcC
Confidence            578999999996 799999999999999999999999887666544331    211  11  111   1       1137


Q ss_pred             ccEEEECCCCC
Q 023553           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 id~li~~ag~~  105 (280)
                      .|++|++....
T Consensus       187 aDiVi~atp~~  197 (275)
T 2hk9_A          187 VQVIVNTTSVG  197 (275)
T ss_dssp             CSEEEECSSTT
T ss_pred             CCEEEEeCCCC
Confidence            89999998754

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.04  E-value=0.15  Score=43.55  Aligned_cols=112  Identities=17%  Similarity=0.217  Sum_probs=70.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC--cchHHHHHHHh-------CCCCCeEEEecCCCCHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ--DNLGQQVCQSL-------GGEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~--~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      +.+++.|+|+ |.+|..++..|+..|. .|++.+++  ++..+.....+       ....++.. ..|   .        
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~--------   73 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---Y--------   73 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---G--------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---H--------
Confidence            4678999997 9999999999999999 99999998  43333222111       11122222 112   1        


Q ss_pred             HHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        87 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                         +.+..-|++|..+|....+     ..+.   .+.++.|+.-...+.+.+..+   ..++.++++|-
T Consensus        74 ---~a~~~aDvVIiaag~p~kp-----g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsN  128 (315)
T 3tl2_A           74 ---ADTADSDVVVITAGIARKP-----GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTN  128 (315)
T ss_dssp             ---GGGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCS
T ss_pred             ---HHhCCCCEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCC
Confidence               1235899999999975432     2444   334566665555555555554   34677777764

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.03  E-value=0.042  Score=47.43  Aligned_cols=36  Identities=17%  Similarity=0.260  Sum_probs=31.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~   51 (280)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.+++++
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence            478999999987 69999999999999974 7777764

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.02  E-value=0.012  Score=49.94  Aligned_cols=72  Identities=19%  Similarity=0.282  Sum_probs=52.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++.+++++|.|+ |++|+++++.|...|++|++.+|+.++.+...+ ..    +..+..     +++.       +...
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g----~~~~~~-----~~l~-------~~l~  214 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-MG----LVPFHT-----DELK-------EHVK  214 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT----CEEEEG-----GGHH-------HHST
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CC----CeEEch-----hhHH-------HHhh
Confidence            4689999999996 899999999999999999999999876554432 21    122211     1222       2234


Q ss_pred             CccEEEECCC
Q 023553           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~id~li~~ag  103 (280)
                      ..|++|++..
T Consensus       215 ~aDvVi~~~p  224 (300)
T 2rir_A          215 DIDICINTIP  224 (300)
T ss_dssp             TCSEEEECCS
T ss_pred             CCCEEEECCC
Confidence            8899999985

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.01  E-value=0.028  Score=48.32  Aligned_cols=113  Identities=15%  Similarity=0.179  Sum_probs=70.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCC-----CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGE-----PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++.|+|+ |.+|.+++..|+..|. .|++.++++++.+.....+...     ....+...+  +.+           .
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~~-----------a   70 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DYK-----------D   70 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CGG-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CHH-----------H
Confidence            457888885 9999999999999887 8999999987765443333211     111221111  221           2


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                      +..-|++|..+|....+     ..+..+   .+..|+.-...+.+.+..+   ..++.+++++-
T Consensus        71 ~~~aDvVIi~ag~p~k~-----G~~R~d---l~~~N~~i~~~i~~~i~~~---~p~a~vivvtN  123 (321)
T 3p7m_A           71 LENSDVVIVTAGVPRKP-----GMSRDD---LLGINIKVMQTVGEGIKHN---CPNAFVICITN  123 (321)
T ss_dssp             GTTCSEEEECCSCCCCT-----TCCHHH---HHHHHHHHHHHHHHHHHHH---CTTCEEEECCS
T ss_pred             HCCCCEEEEcCCcCCCC-----CCCHHH---HHHHhHHHHHHHHHHHHHH---CCCcEEEEecC
Confidence            24889999999975432     234433   4455655555555555554   34577777754

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.99  E-value=0.01  Score=50.86  Aligned_cols=97  Identities=18%  Similarity=0.251  Sum_probs=64.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      |+ ++|+|++|++|...++.+...|++|+++++++++.+.+. ++.  .+..+   |..+.+.    ++++  ..+++|+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~lG--a~~vi---~~~~~~~----~~~~--~~~~~d~  214 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SLG--ANRIL---SRDEFAE----SRPL--EKQLWAG  214 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHT--CSEEE---EGGGSSC----CCSS--CCCCEEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcC--CCEEE---ecCCHHH----HHhh--cCCCccE
Confidence            45 999999999999999999999999999999988776654 343  22222   2111111    1111  1147999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      +|.++|.                          .  ..+..+..+  +.+|+++.++...
T Consensus       215 v~d~~g~--------------------------~--~~~~~~~~l--~~~G~iv~~G~~~  244 (324)
T 3nx4_A          215 AIDTVGD--------------------------K--VLAKVLAQM--NYGGCVAACGLAG  244 (324)
T ss_dssp             EEESSCH--------------------------H--HHHHHHHTE--EEEEEEEECCCTT
T ss_pred             EEECCCc--------------------------H--HHHHHHHHH--hcCCEEEEEecCC
Confidence            9998762                          0  234455665  3468999887654

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.97  E-value=0.059  Score=43.10  Aligned_cols=76  Identities=13%  Similarity=0.111  Sum_probs=52.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++..+++.|.| .|.+|.+++..|++.|++|++.+|+++        .-...++.++.+-   ...+..+++++.....
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~--------~~~~aD~vi~av~---~~~~~~v~~~l~~~~~   82 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ--------ATTLGEIVIMAVP---YPALAALAKQYATQLK   82 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC--------CSSCCSEEEECSC---HHHHHHHHHHTHHHHT
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH--------HhccCCEEEEcCC---cHHHHHHHHHHHHhcC
Confidence            457788999999 799999999999999999999999876        1123466665443   6677777887765554


Q ss_pred             CccEEEECC
Q 023553           94 TLDIMVNNA  102 (280)
Q Consensus        94 ~id~li~~a  102 (280)
                       =.++|+..
T Consensus        83 -~~~vi~~~   90 (209)
T 2raf_A           83 -GKIVVDIT   90 (209)
T ss_dssp             -TSEEEECC
T ss_pred             -CCEEEEEC
Confidence             23455544

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.95  E-value=0.11  Score=43.44  Aligned_cols=168  Identities=13%  Similarity=0.092  Sum_probs=96.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEE-EEecCcchH--H-----------------HHHHHhCCCCCeEEEecCCCC
Q 023553           19 RVALITGGATGIGESTVRLFHKH-GAKVC-IADVQDNLG--Q-----------------QVCQSLGGEPDTFFCHCDVTK   77 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~-g~~Vi-~~~r~~~~~--~-----------------~~~~~~~~~~~~~~~~~D~~~   77 (280)
                      -+++|+|++|.+|+.+++.+.+. ++.++ +++++....  .                 ++.+.+. ..++   ..|++.
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~-~~Dv---VIDft~   81 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD-DFDV---FIDFTR   81 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT-SCSE---EEECSC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc-CCCE---EEEcCC
Confidence            47999999999999999998854 77766 455544220  0                 0111111 1233   248889


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHH-------hhhh----hhhHHHHHHHHHHhcccCC
Q 023553           78 EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV-------FDIN----VKGVFHGMKHAARIMIPQT  146 (280)
Q Consensus        78 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~-------~~~n----~~~~~~l~~~~~~~l~~~~  146 (280)
                      ++.....+..+.+.  ++.+++-..|....        ..+.+.+.       +..|    +.-.+.+++.+.+.|.+  
T Consensus        82 p~~~~~~~~~a~~~--G~~vVigTtG~~~e--------~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~~--  149 (273)
T 1dih_A           82 PEGTLNHLAFCRQH--GKGMVIGTTGFDEA--------GKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGD--  149 (273)
T ss_dssp             HHHHHHHHHHHHHT--TCEEEECCCCCCHH--------HHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHTT--
T ss_pred             hHHHHHHHHHHHhC--CCCEEEECCCCCHH--------HHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcCC--
Confidence            99888888877765  77888877763211        11222221       1112    11233445555555521  


Q ss_pred             CceEEEEccccccccCCCCccchhhHHHHHHHHHHHHHHH---------------CCCCeEEEEEeCCceeccc
Q 023553          147 KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL---------------GKYGIRVNCVSPYAVATGL  205 (280)
Q Consensus       147 ~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~---------------~~~gi~v~~v~pg~v~t~~  205 (280)
                      .-.|=.+   ..+....--.+|+.++...+.+.+.+...+               ...+|.+.++.-|.+..+-
T Consensus       150 ~~dieii---E~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~h  220 (273)
T 1dih_A          150 YTDIEII---EAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEH  220 (273)
T ss_dssp             TSEEEEE---EEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEEE
T ss_pred             CCCEEEE---EeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCccE
Confidence            1122111   334444445788999888887776654321               1356899999877665544

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.93  E-value=0.032  Score=49.72  Aligned_cols=72  Identities=14%  Similarity=0.143  Sum_probs=53.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +-+.+|+++|.|++ -+|+.+++.+.+.|++|++++.++......   ..   + ..+..|..|.+.+.++++       
T Consensus        31 ~~~~~~~IlIlG~G-~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~---~a---d-~~~~~~~~d~~~l~~~a~-------   95 (419)
T 4e4t_A           31 PILPGAWLGMVGGG-QLGRMFCFAAQSMGYRVAVLDPDPASPAGA---VA---D-RHLRAAYDDEAALAELAG-------   95 (419)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCTTCHHHH---HS---S-EEECCCTTCHHHHHHHHH-------
T ss_pred             cCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCCcCchhh---hC---C-EEEECCcCCHHHHHHHHh-------
Confidence            45689999999865 699999999999999999998765432211   11   1 244578899998877773       


Q ss_pred             CccEEEE
Q 023553           94 TLDIMVN  100 (280)
Q Consensus        94 ~id~li~  100 (280)
                      ++|+++.
T Consensus        96 ~~D~V~~  102 (419)
T 4e4t_A           96 LCEAVST  102 (419)
T ss_dssp             HCSEEEE
T ss_pred             cCCEEEE
Confidence            6898884

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.92  E-value=0.41  Score=40.78  Aligned_cols=146  Identities=16%  Similarity=0.162  Sum_probs=83.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-C--CeEEEEecCcchHHHHHHHhCCCCCeEEEec-CCCCHHHHHHHHHHHHHHhCCc
Q 023553           20 VALITGGATGIGESTVRLFHKH-G--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHC-DVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~-g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ++.|+||+|.+|..++..|+.. +  ..+++++.++....+..+..+......+... .-.+.+.           +...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~-----------~~~a   70 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPA-----------LEGA   70 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHH-----------HTTC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHH-----------hCCC
Confidence            6889999999999999999886 4  4699999887222223333332222222211 1112332           2489


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc-----------cccC-C
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-----------AIGG-L  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~-----------~~~~-~  163 (280)
                      |++|..||....+     .++.   .+.++.|..-...+.+.+..+   ..++.+++++--..           ..+. |
T Consensus        71 Divii~ag~~rkp-----G~~R---~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPvd~~t~~a~~~~k~sg~~p  139 (312)
T 3hhp_A           71 DVVLISAGVARKP-----GMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNPVNTTVAIAAEVLKKAGVYD  139 (312)
T ss_dssp             SEEEECCSCSCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHHHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCcchhHHHHHHHHHHHcCCCC
Confidence            9999999975432     2444   445566666555566666554   34677777764211           1122 3


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHC
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELG  187 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~  187 (280)
                      .....+....=...+...+++.+.
T Consensus       140 ~~rv~G~~~LD~~R~~~~la~~lg  163 (312)
T 3hhp_A          140 KNKLFGVTTLDIIRSNTFVAELKG  163 (312)
T ss_dssp             TTSEEECCHHHHHHHHHHHHHHHT
T ss_pred             cceEEEEechhHHHHHHHHHHHhC
Confidence            334455552223445666777764

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.90  E-value=0.011  Score=51.06  Aligned_cols=76  Identities=16%  Similarity=0.137  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHh-------CCCCCeEEEecCCCCHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSL-------GGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +..++.|.|+ |.+|..++..|+..|. +|++.+++++.++.....+       ....++.. .   +|.++        
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~e--------   74 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YSYEA--------   74 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CSHHH--------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CCHHH--------
Confidence            3457889998 9999999999999998 9999999987666532222       11122222 1   23321        


Q ss_pred             HHHhCCccEEEECCCCCCC
Q 023553           89 VEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~  107 (280)
                        .+..-|++|..+|....
T Consensus        75 --a~~~aDiVi~a~g~p~~   91 (331)
T 1pzg_A           75 --ALTGADCVIVTAGLTKV   91 (331)
T ss_dssp             --HHTTCSEEEECCSCSSC
T ss_pred             --HhCCCCEEEEccCCCCC
Confidence              12388999999997543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.90  E-value=0.015  Score=48.47  Aligned_cols=37  Identities=8%  Similarity=0.135  Sum_probs=34.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      +.||+++|.|.++-.|+.+++.|...|++|.++.++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t  184 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT  184 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            8999999999999999999999999999999987643

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.88  E-value=0.014  Score=48.96  Aligned_cols=43  Identities=16%  Similarity=0.148  Sum_probs=37.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ   56 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~   56 (280)
                      .+++||+++|.|.++-.|+.++..|...|++|.++.++...++
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~  199 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLA  199 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHH
Confidence            4689999999999999999999999999999999876544333

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.88  E-value=0.015  Score=49.17  Aligned_cols=72  Identities=19%  Similarity=0.302  Sum_probs=51.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++.||+++|.|+ |+||+.+++.+...|++|++.+|+.+..+... ...    +..+  +.   +++.       +...
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g----~~~~--~~---~~l~-------~~l~  212 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMG----MEPF--HI---SKAA-------QELR  212 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTT----SEEE--EG---GGHH-------HHTT
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCC----Ceec--Ch---hhHH-------HHhc
Confidence            3689999999995 89999999999999999999999987654432 221    1222  11   1222       2234


Q ss_pred             CccEEEECCC
Q 023553           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~id~li~~ag  103 (280)
                      ..|++++++.
T Consensus       213 ~aDvVi~~~p  222 (293)
T 3d4o_A          213 DVDVCINTIP  222 (293)
T ss_dssp             TCSEEEECCS
T ss_pred             CCCEEEECCC
Confidence            8999999874

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=95.86  E-value=0.12  Score=44.70  Aligned_cols=116  Identities=11%  Similarity=0.097  Sum_probs=67.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCcc--hHHHHHHH---hCCCCCeEEEecCCCCHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-------KVCIADVQDN--LGQQVCQS---LGGEPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~~--~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~   84 (280)
                      +.-+|.|+||+|+||+.++..|++...       .+.+.+.++.  .++-...+   ............+  +..     
T Consensus        23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~~-----   95 (345)
T 4h7p_A           23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DPR-----   95 (345)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CHH-----
T ss_pred             CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--ChH-----
Confidence            456999999999999999999998643       5888887653  22322222   2222222222221  222     


Q ss_pred             HHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEc
Q 023553           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        85 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~is  154 (280)
                           +.+..-|++|..||....+     .++.++   .++.|..=.-.+.+.+..+-  .++.+|+.++
T Consensus        96 -----~a~~~advVvi~aG~prkp-----GmtR~D---Ll~~Na~I~~~~~~~i~~~a--~~~~~vlvvs  150 (345)
T 4h7p_A           96 -----VAFDGVAIAIMCGAFPRKA-----GMERKD---LLEMNARIFKEQGEAIAAVA--ASDCRVVVVG  150 (345)
T ss_dssp             -----HHTTTCSEEEECCCCCCCT-----TCCHHH---HHHHHHHHHHHHHHHHHHHS--CTTCEEEECS
T ss_pred             -----HHhCCCCEEEECCCCCCCC-----CCCHHH---HHHHhHHHHHHHHHHHHhhc--cCceEEEEeC
Confidence                 1235899999999986532     356554   35556554444444444431  2334555555

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.81  E-value=0.0062  Score=51.73  Aligned_cols=111  Identities=12%  Similarity=0.107  Sum_probs=65.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHh---C--CCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSL---G--GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~---~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++.|+|+ |.+|.+++..|+..|.  .|++.+++++.++.....+   .  ......+...  +|.+.           +
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH-----------h
Confidence            5789999 9999999999999998  8999999987654221111   1  1111122211  12222           2


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                      ..-|++|..+|....+     ..+..+   .++.|+.-...+.+.+..+   ..++.++++|-
T Consensus        68 ~~aDiVViaag~~~kp-----G~~R~d---l~~~N~~i~~~i~~~i~~~---~p~a~iivvsN  119 (294)
T 1oju_A           68 KGSEIIVVTAGLARKP-----GMTRLD---LAHKNAGIIKDIAKKIVEN---APESKILVVTN  119 (294)
T ss_dssp             TTCSEEEECCCCCCCS-----SCCHHH---HHHHHHHHHHHHHHHHHTT---STTCEEEECSS
T ss_pred             CCCCEEEECCCCCCCC-----CCcHHH---HHHHHHHHHHHHHHHHHhh---CCCeEEEEeCC
Confidence            4889999999975432     234433   3555544333334444332   34577777764

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.81  E-value=0.017  Score=52.00  Aligned_cols=38  Identities=29%  Similarity=0.398  Sum_probs=34.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      +++++|+++|.|. ++.|.++|+.|+++|+.|.+.+++.
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~   42 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKP   42 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            4678999999999 7899999999999999999999865

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.81  E-value=0.015  Score=50.35  Aligned_cols=78  Identities=21%  Similarity=0.254  Sum_probs=49.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC-
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   93 (280)
                      ..|++++|.|+ +++|...+..++.. |++|+++++++++++.. +++.  ... ++  |..+.+.    .+++.+..+ 
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~-~~~G--a~~-~i--~~~~~~~----~~~v~~~t~g  230 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLA-KKIG--ADV-TI--NSGDVNP----VDEIKKITGG  230 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHH-HHTT--CSE-EE--EC-CCCH----HHHHHHHTTS
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhh-hhcC--CeE-EE--eCCCCCH----HHHhhhhcCC
Confidence            46899999987 77777777777765 78999999998876544 3333  122 22  3333332    233444433 


Q ss_pred             -CccEEEECCCC
Q 023553           94 -TLDIMVNNAGI  104 (280)
Q Consensus        94 -~id~li~~ag~  104 (280)
                       .+|.++.+++.
T Consensus       231 ~g~d~~~~~~~~  242 (348)
T 4eez_A          231 LGVQSAIVCAVA  242 (348)
T ss_dssp             SCEEEEEECCSC
T ss_pred             CCceEEEEeccC
Confidence             57888888763

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=95.80  E-value=0.16  Score=43.69  Aligned_cols=146  Identities=12%  Similarity=0.127  Sum_probs=83.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      -+..++.|+|+ |.+|..++..|+..+.  .+++.+.++++++.....+...    ..+.+.. |  +.+.         
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a---------   73 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD---------   73 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH---------
Confidence            34568999999 9999999999998875  6999999887776544444221    2222222 2  2221         


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc--------c
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI--------G  161 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~--------~  161 (280)
                        +..-|++|..+|....+     ..+..   +.+..|+.-...+.+.+..+   ..++.+++++--....        +
T Consensus        74 --~~~aDvVii~ag~~~k~-----g~~R~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~~~t~~~~k~s~  140 (326)
T 2zqz_A           74 --AKDADLVVITAGAPQKP-----GETRL---DLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPVDILTYATWKLSG  140 (326)
T ss_dssp             --GGGCSEEEECCCCC----------CHH---HHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSHHHHHHHHHHHHC
T ss_pred             --hCCCCEEEEcCCCCCCC-----CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcHHHHHHHHHHHcC
Confidence              24899999999975331     23333   33455555544455555544   3567888775422211        1


Q ss_pred             CCCCccchh-hHHHHHHHHHHHHHHHC
Q 023553          162 GLGPHAYTG-SKHAVLGLNKNVAAELG  187 (280)
Q Consensus       162 ~~~~~~Y~~-sK~al~~~~~~la~e~~  187 (280)
                      .|.....+. +-.=...+...+++.+.
T Consensus       141 ~p~~rviG~gt~LD~~R~~~~la~~lg  167 (326)
T 2zqz_A          141 FPKNRVVGSGTSLDTARFRQSIAEMVN  167 (326)
T ss_dssp             CCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             CCHHHEEEccccchHHHHHHHHHHHhC
Confidence            222233333 22224555666666663

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.78  E-value=0.059  Score=46.15  Aligned_cols=112  Identities=13%  Similarity=0.121  Sum_probs=67.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCC----CeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEP----DTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++.|+|+ |.+|..++..|+..|.  .|++++.++++++.....+....    .+.+. .  .+.+           .
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~~-----------a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDYS-----------D   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCHH-----------H
Confidence            457888898 9999999999999987  89999998776554444443221    22111 1  1211           2


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                      +..-|++|..+|....+     ..+..   +.+..|+.-...+++.+.++   ..++.+++++-
T Consensus        72 ~~~aDvVii~~g~p~k~-----g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tN  124 (318)
T 1y6j_A           72 VKDCDVIVVTAGANRKP-----GETRL---DLAKKNVMIAKEVTQNIMKY---YNHGVILVVSN  124 (318)
T ss_dssp             GTTCSEEEECCCC-----------CHH---HHHHHHHHHHHHHHHHHHHH---CCSCEEEECSS
T ss_pred             hCCCCEEEEcCCCCCCC-----CcCHH---HHHHhhHHHHHHHHHHHHHh---CCCcEEEEecC
Confidence            35899999999875321     22332   34566666666666666665   34677777543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.76  E-value=0.079  Score=44.43  Aligned_cols=42  Identities=12%  Similarity=0.241  Sum_probs=37.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   60 (280)
                      +++.|.|++|.+|..+++.|++.|++|++.+|+++..+.+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            579999999999999999999999999999999877666543

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.76  E-value=0.016  Score=50.03  Aligned_cols=72  Identities=17%  Similarity=0.183  Sum_probs=55.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .+.++|.|+ +.+|+.+++.|.++|. |++++++++..+ ..+     ..+.++..|.++++.++++      ...+.|.
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-----~~~~~i~gd~~~~~~L~~a------~i~~a~~  180 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-----SGANFVHGDPTRVSDLEKA------NVRGARA  180 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-----TTCEEEESCTTSHHHHHHT------CSTTEEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-----CCcEEEEeCCCCHHHHHhc------ChhhccE
Confidence            557999996 8999999999999999 999999998776 432     2467888999999876533      1136777


Q ss_pred             EEECCC
Q 023553           98 MVNNAG  103 (280)
Q Consensus        98 li~~ag  103 (280)
                      +|...+
T Consensus       181 vi~~~~  186 (336)
T 1lnq_A          181 VIVDLE  186 (336)
T ss_dssp             EEECCS
T ss_pred             EEEcCC
Confidence            777653

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.74  E-value=0.018  Score=50.23  Aligned_cols=81  Identities=19%  Similarity=0.207  Sum_probs=54.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc-------------------chHHH---HHHHhCCCCCeE
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD-------------------NLGQQ---VCQSLGGEPDTF   69 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~-------------------~~~~~---~~~~~~~~~~~~   69 (280)
                      ...+++++|+|.|+ ||+|.+++..|+..|. ++.+++++.                   .+.+.   ....+.+..++.
T Consensus       113 q~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~  191 (353)
T 3h5n_A          113 QDKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVS  191 (353)
T ss_dssp             HHHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEE
Confidence            34578999999998 7899999999999997 588887753                   12222   223334445666


Q ss_pred             EEecCCCCHHHHHHHHHHHHHHhCCccEEEECC
Q 023553           70 FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNA  102 (280)
Q Consensus        70 ~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~a  102 (280)
                      .+..++++..++.       + +.+.|++|.+.
T Consensus       192 ~~~~~i~~~~~~~-------~-~~~~DlVvd~~  216 (353)
T 3h5n_A          192 EIALNINDYTDLH-------K-VPEADIWVVSA  216 (353)
T ss_dssp             EEECCCCSGGGGG-------G-SCCCSEEEECC
T ss_pred             EeecccCchhhhh-------H-hccCCEEEEec
Confidence            6666766554221       2 45788888865

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.71  E-value=0.092  Score=43.42  Aligned_cols=86  Identities=13%  Similarity=0.210  Sum_probs=56.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhC-----------CCCCeEEEecCCCCHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLG-----------GEPDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~   83 (280)
                      +.+.++.|.|+ |.+|..+++.|++.|+. |.+.+|+++..+...+...           ...++.++.   .....+.+
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a---v~~~~~~~   83 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS---LKDSAFAE   83 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC---CCHHHHHH
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe---cCHHHHHH
Confidence            44567888887 99999999999999998 8889999887776655421           112333332   23445677


Q ss_pred             HHHHHHHHhCCccEEEECCCCC
Q 023553           84 AVDLTVEKFGTLDIMVNNAGIS  105 (280)
Q Consensus        84 ~~~~~~~~~g~id~li~~ag~~  105 (280)
                      +++++.....+=.++|++.+..
T Consensus        84 v~~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           84 LLQGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHHHhhcCCCcEEEECCCCC
Confidence            7776654332334667766543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.70  E-value=0.016  Score=48.57  Aligned_cols=38  Identities=18%  Similarity=0.274  Sum_probs=34.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~   51 (280)
                      .++.||.++|.|.++-.|+.+++.|...|++|.++.|+
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            46899999999999999999999999999999888654

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.69  E-value=0.019  Score=48.50  Aligned_cols=39  Identities=23%  Similarity=0.374  Sum_probs=35.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      .++.||.++|.|.++-.|+.+++.|...|++|.++.|+.
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            468999999999999999999999999999999987743

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.66  E-value=0.021  Score=48.40  Aligned_cols=40  Identities=15%  Similarity=0.284  Sum_probs=35.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   58 (280)
                      -+++.|.|+ |.+|..+|..|++.|++|++.+++++.++..
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            467888888 8999999999999999999999998776653

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.63  E-value=0.81  Score=38.11  Aligned_cols=165  Identities=15%  Similarity=0.143  Sum_probs=94.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEE-EecCcc---------------------hHHHHHHHhCCCCCeEEEecCC
Q 023553           19 RVALITGGATGIGESTVRLFHKH-GAKVCI-ADVQDN---------------------LGQQVCQSLGGEPDTFFCHCDV   75 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~-g~~Vi~-~~r~~~---------------------~~~~~~~~~~~~~~~~~~~~D~   75 (280)
                      -++.|.|++|.+|+.+++.+.+. +..++. ++|+..                     .++++.+    ..++   ..|.
T Consensus         8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~----~~DV---VIDf   80 (272)
T 4f3y_A            8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCA----EADY---LIDF   80 (272)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHH----HCSE---EEEC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhc----CCCE---EEEc
Confidence            47999999999999999999876 666666 466532                     1222222    1233   3588


Q ss_pred             CCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHH-------hhhhhhhHHH----HHHHHHHhccc
Q 023553           76 TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV-------FDINVKGVFH----GMKHAARIMIP  144 (280)
Q Consensus        76 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~-------~~~n~~~~~~----l~~~~~~~l~~  144 (280)
                      +.++.....+..+.+.  ++.+++-+.|...        ...+.+++.       +..|+---++    +++.+.++|. 
T Consensus        81 T~p~a~~~~~~~al~~--G~~vVigTTG~s~--------~~~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l~-  149 (272)
T 4f3y_A           81 TLPEGTLVHLDAALRH--DVKLVIGTTGFSE--------PQKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQFA-  149 (272)
T ss_dssp             SCHHHHHHHHHHHHHH--TCEEEECCCCCCH--------HHHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHTS-
T ss_pred             CCHHHHHHHHHHHHHc--CCCEEEECCCCCH--------HHHHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhcC-
Confidence            9999988888888776  8889998877421        112223332       2223332233    3444444442 


Q ss_pred             CCCceEEEEccccccccCCCCccchhhHHHHHHHHHHHHHHH---------------CCCCeEEEEEeCCceeccc
Q 023553          145 QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL---------------GKYGIRVNCVSPYAVATGL  205 (280)
Q Consensus       145 ~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~---------------~~~gi~v~~v~pg~v~t~~  205 (280)
                        .+.=|-|  ...+....--.+-+.+....+.+.+.+...+               .+.+|.+.++.-|-+-.+-
T Consensus       150 --~~~diei--~E~HH~~K~DaPSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~g~r~~~~i~i~s~R~g~ivg~h  221 (272)
T 4f3y_A          150 --QGYDIEI--IEAHHRHKVDAPSGTALMMGETIAAATGRSLDDCAVYGRHGVTGERDPSTIGFSAIRGGDIVGDH  221 (272)
T ss_dssp             --SSCEEEE--EEEECTTCCSSSCHHHHHHHHHHHHTTTCCHHHHEEECCCSCCCSCCTTCEEEEEEECTTCCEEE
T ss_pred             --cCCCEEE--EEecCCCCCCCCCHHHHHHHHHHHHHhCcccccccccccccccCCCCCCccCEEEEECCCCceEE
Confidence              1211111  1334444444555666666666655433221               1246899999888765443

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.63  E-value=0.063  Score=49.83  Aligned_cols=89  Identities=15%  Similarity=0.080  Sum_probs=56.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc-------------------chHHHH---HHHhCCCCCeEEE
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD-------------------NLGQQV---CQSLGGEPDTFFC   71 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~-------------------~~~~~~---~~~~~~~~~~~~~   71 (280)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+.+.+   .+.+.+..++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            478999999987 6999999999999997 488887653                   233333   3334444556666


Q ss_pred             ecCC-------CCHHHHHHHHHHHHHHhCCccEEEECCCC
Q 023553           72 HCDV-------TKEEDVCSAVDLTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        72 ~~D~-------~~~~~~~~~~~~~~~~~g~id~li~~ag~  104 (280)
                      ..++       ++++....-.+.+.+.+.+.|+||++..-
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn  441 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS  441 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence            5544       33322111122333334578999988753

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.60  E-value=0.021  Score=47.91  Aligned_cols=44  Identities=11%  Similarity=0.105  Sum_probs=37.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ   57 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~   57 (280)
                      .++.||+++|.|++.-+|+.+++.|...|++|.++.++...+.+
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~  198 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH  198 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence            46899999999999999999999999999999998766544433

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.58  E-value=0.056  Score=47.40  Aligned_cols=72  Identities=18%  Similarity=0.239  Sum_probs=52.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ..+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.++....   ...   .+ .++..|..|.+.+.++++       
T Consensus         8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~---~~~---ad-~~~~~~~~d~~~l~~~~~-------   72 (377)
T 3orq_A            8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC---RYV---AH-EFIQAKYDDEKALNQLGQ-------   72 (377)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT---GGG---SS-EEEECCTTCHHHHHHHHH-------
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh---hhh---CC-EEEECCCCCHHHHHHHHH-------
Confidence            3468999999986 56999999999999999999987654211   111   11 245688999988877765       


Q ss_pred             CccEEEE
Q 023553           94 TLDIMVN  100 (280)
Q Consensus        94 ~id~li~  100 (280)
                      ++|+++.
T Consensus        73 ~~dvi~~   79 (377)
T 3orq_A           73 KCDVITY   79 (377)
T ss_dssp             HCSEEEE
T ss_pred             hCCccee
Confidence            3677643

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.58  E-value=0.0039  Score=55.41  Aligned_cols=36  Identities=19%  Similarity=0.322  Sum_probs=32.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEE-EEec
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVC-IADV   50 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi-~~~r   50 (280)
                      .+++||+++|+| .|.+|+..++.|.+.|++|+ +.++
T Consensus       214 ~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          214 LDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            368999999998 88999999999999999998 6666

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=95.58  E-value=0.11  Score=44.51  Aligned_cols=111  Identities=15%  Similarity=0.148  Sum_probs=68.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhC-------CCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLG-------GEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+++.|+|+ |.+|.+++..|+..|. .|++.++++++.+.....+.       ...++.. ..|   .+          
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~----------   71 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YA----------   71 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GG----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HH----------
Confidence            568899998 9999999999999998 99999999876543222221       1122221 122   11          


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                       .+..-|++|..+|....+     ..+..   +.+..|+.-...+.+.+..+   ..++.+++++-
T Consensus        72 -a~~~aDiVIiaag~p~k~-----G~~R~---dl~~~N~~i~~~i~~~i~~~---~p~a~iivvtN  125 (324)
T 3gvi_A           72 -AIEGADVVIVTAGVPRKP-----GMSRD---DLLGINLKVMEQVGAGIKKY---APEAFVICITN  125 (324)
T ss_dssp             -GGTTCSEEEECCSCCCC----------C---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECCS
T ss_pred             -HHCCCCEEEEccCcCCCC-----CCCHH---HHHHhhHHHHHHHHHHHHHH---CCCeEEEecCC
Confidence             224889999999975432     12222   33445555444455555444   34577777764

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=95.56  E-value=0.084  Score=46.37  Aligned_cols=72  Identities=17%  Similarity=0.183  Sum_probs=51.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .-+.+|+++|.|++. +|+.+++.+.+.|++|++++.+.....   ..   ..+ ..+..|..|.+.+.++++       
T Consensus        10 ~~~~~k~IlIlG~G~-~g~~la~aa~~~G~~vi~~d~~~~~~~---~~---~ad-~~~~~~~~d~~~l~~~~~-------   74 (389)
T 3q2o_A           10 IILPGKTIGIIGGGQ-LGRMMALAAKEMGYKIAVLDPTKNSPC---AQ---VAD-IEIVASYDDLKAIQHLAE-------   74 (389)
T ss_dssp             CCCTTSEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSTTCTT---TT---TCS-EEEECCTTCHHHHHHHHH-------
T ss_pred             cCCCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEeCCCCCch---HH---hCC-ceEecCcCCHHHHHHHHH-------
Confidence            346899999998765 999999999999999999987653211   00   111 234578888888777665       


Q ss_pred             CccEEEE
Q 023553           94 TLDIMVN  100 (280)
Q Consensus        94 ~id~li~  100 (280)
                      ..|++..
T Consensus        75 ~~dvI~~   81 (389)
T 3q2o_A           75 ISDVVTY   81 (389)
T ss_dssp             TCSEEEE
T ss_pred             hCCEeee
Confidence            5677643

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.56  E-value=0.018  Score=50.45  Aligned_cols=72  Identities=18%  Similarity=0.169  Sum_probs=50.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++.||++.|.|. |.||+++|+.|...|++ |++.+|+....+.. ....    +.  .+  .+.   .++++      
T Consensus       160 ~~l~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~-~~~g----~~--~~--~~l---~ell~------  220 (364)
T 2j6i_A          160 YDIEGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAE-EKVG----AR--RV--ENI---EELVA------  220 (364)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHH-HHTT----EE--EC--SSH---HHHHH------
T ss_pred             ccCCCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHH-HhcC----cE--ec--CCH---HHHHh------
Confidence            4789999999975 99999999999999997 99999887554432 2221    11  11  122   22333      


Q ss_pred             CCccEEEECCCCC
Q 023553           93 GTLDIMVNNAGIS  105 (280)
Q Consensus        93 g~id~li~~ag~~  105 (280)
                       .-|+++.+....
T Consensus       221 -~aDvV~l~~P~t  232 (364)
T 2j6i_A          221 -QADIVTVNAPLH  232 (364)
T ss_dssp             -TCSEEEECCCCS
T ss_pred             -cCCEEEECCCCC
Confidence             789999988543

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.55  E-value=0.011  Score=50.15  Aligned_cols=40  Identities=25%  Similarity=0.243  Sum_probs=36.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      .++.||++.|.|. |.||+++|+.|...|++|++.+|+.+.
T Consensus       118 ~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~  157 (290)
T 3gvx_A          118 TLLYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSVD  157 (290)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCC
T ss_pred             eeeecchheeecc-CchhHHHHHHHHhhCcEEEEEeccccc
Confidence            4689999999985 799999999999999999999998764

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.54  E-value=0.021  Score=47.50  Aligned_cols=69  Identities=19%  Similarity=0.265  Sum_probs=52.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++++ +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.+....    .   .  .+.+       +   . ..
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~----~---~--~~~~-------~---~-~~  171 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGL----R---A--VPLE-------K---A-RE  171 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTC----E---E--CCGG-------G---G-GG
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcc----c---h--hhHh-------h---c-cC
Confidence            5788 9999997 7799999999999999999999998877777665542    1   1  1111       1   1 27


Q ss_pred             ccEEEECCCCC
Q 023553           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 id~li~~ag~~  105 (280)
                      .|++|++....
T Consensus       172 ~Divi~~tp~~  182 (263)
T 2d5c_A          172 ARLLVNATRVG  182 (263)
T ss_dssp             CSEEEECSSTT
T ss_pred             CCEEEEccCCC
Confidence            89999998754

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.53  E-value=0.17  Score=43.52  Aligned_cols=113  Identities=11%  Similarity=-0.029  Sum_probs=70.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC----CCCCeE-EEecCCCCHHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG----GEPDTF-FCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~----~~~~~~-~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ..+++.|+|+ |.+|..++..|+..|.  .|++++.++++.+.....+.    ...... ....|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            4678999999 9999999999999997  79999998876554433221    111111 22234332            


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                        +..-|++|..||....+     ..+..   +.+..|+.-...+.+.+.++   ..++.++++|-
T Consensus        87 --~~daDiVIitaG~p~kp-----G~tR~---dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtN  139 (330)
T 3ldh_A           87 --SAGSKLVVITAGARQQE-----GESRL---NLVQRNVNIFKFIIPNIVKH---SPDCLKELHPE  139 (330)
T ss_dssp             --CSSCSEEEECCSCCCCS-----SCCTT---GGGHHHHHHHHHHHHHHHHH---CTTCEEEECSS
T ss_pred             --hCCCCEEEEeCCCCCCC-----CCCHH---HHHHhhHHHHHHHHHHHHhh---CCCceEEeCCC
Confidence              24889999999986432     12221   24444544444445555544   34677777764

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.51  E-value=0.017  Score=50.32  Aligned_cols=42  Identities=17%  Similarity=0.203  Sum_probs=36.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ   56 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~   56 (280)
                      .++.||++.|.|. |.||+.+|+.|...|++|+..+|+....+
T Consensus       160 ~~l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~  201 (351)
T 3jtm_A          160 YDLEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPE  201 (351)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHH
T ss_pred             ccccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHH
Confidence            5699999999985 67999999999999999999998865443

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.50  E-value=0.043  Score=46.47  Aligned_cols=80  Identities=14%  Similarity=0.142  Sum_probs=52.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .+++.|.||.|.+|.+++..|++.|+.|++++|+++...  .+.+. ..++.++.+-..   .+..+++++.....+=-+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~--~~~~~-~aDvVilavp~~---~~~~vl~~l~~~l~~~~i   94 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA--ESILA-NADVVIVSVPIN---LTLETIERLKPYLTENML   94 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH--HHHHT-TCSEEEECSCGG---GHHHHHHHHGGGCCTTSE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccCH--HHHhc-CCCEEEEeCCHH---HHHHHHHHHHhhcCCCcE
Confidence            467999999999999999999999999999998865311  11222 346666655333   355566666443322225


Q ss_pred             EEECCC
Q 023553           98 MVNNAG  103 (280)
Q Consensus        98 li~~ag  103 (280)
                      ++..++
T Consensus        95 v~~~~s  100 (298)
T 2pv7_A           95 LADLTS  100 (298)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            555554

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.48  E-value=0.14  Score=43.54  Aligned_cols=72  Identities=15%  Similarity=0.184  Sum_probs=49.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCC-------CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGG-------EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++.|+|+ |.+|..++..|+..|. +|++++.++++++.....+..       ..++.. ..|   .+.          
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-t~d---~~a----------   67 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-TNN---YAD----------   67 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ESC---GGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-CCC---HHH----------
Confidence            57899998 9999999999999996 899999988766554333322       122221 122   111          


Q ss_pred             HhCCccEEEECCCCCC
Q 023553           91 KFGTLDIMVNNAGISG  106 (280)
Q Consensus        91 ~~g~id~li~~ag~~~  106 (280)
                       +...|++|..+|...
T Consensus        68 -~~~aD~Vi~a~g~p~   82 (309)
T 1ur5_A           68 -TANSDVIVVTSGAPR   82 (309)
T ss_dssp             -GTTCSEEEECCCC--
T ss_pred             -HCCCCEEEEcCCCCC
Confidence             248899999999754

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.47  E-value=0.022  Score=48.14  Aligned_cols=40  Identities=20%  Similarity=0.291  Sum_probs=35.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      .++.||+++|.|++.-+|+.+++.|...|++|.++.++..
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~  200 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA  200 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcc
Confidence            4689999999999999999999999999999998865543

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.45  E-value=0.25  Score=42.06  Aligned_cols=143  Identities=13%  Similarity=0.128  Sum_probs=83.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           19 RVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++.|+|+ |.+|..++..|+..+  ..+++.+.++++++.....+...    ..+.+.. +  +.+.           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------h
Confidence            36889998 999999999999987  57999999987766544444221    1222222 2  2222           2


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc--------cCCC
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI--------GGLG  164 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~--------~~~~  164 (280)
                      ..-|++|..+|....+     ..+..+   .+..|+.-...+.+.+..+   ..++.++++|--....        +.|.
T Consensus        66 ~~aD~Vii~ag~~~~~-----g~~r~d---l~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~~~t~~~~k~s~~p~  134 (310)
T 2xxj_A           66 EGARAVVLAAGVAQRP-----GETRLQ---LLDRNAQVFAQVVPRVLEA---APEAVLLVATNPVDVMTQVAYALSGLPP  134 (310)
T ss_dssp             TTEEEEEECCCCCCCT-----TCCHHH---HHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHHHHHHHHHHHHTCCG
T ss_pred             CCCCEEEECCCCCCCC-----CcCHHH---HHHhhHHHHHHHHHHHHHH---CCCcEEEEecCchHHHHHHHHHHcCCCH
Confidence            4899999999975432     234433   3455555444455555444   3467888775422211        1222


Q ss_pred             Cccchh-hHHHHHHHHHHHHHHHC
Q 023553          165 PHAYTG-SKHAVLGLNKNVAAELG  187 (280)
Q Consensus       165 ~~~Y~~-sK~al~~~~~~la~e~~  187 (280)
                      ....+. +-.=...+...+++.+.
T Consensus       135 ~rviG~gt~LD~~R~~~~la~~lg  158 (310)
T 2xxj_A          135 GRVVGSGTILDTARFRALLAEYLR  158 (310)
T ss_dssp             GGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             HHEEecCcchhHHHHHHHHHHHhC
Confidence            233344 22224556666666664

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.44  E-value=0.019  Score=49.93  Aligned_cols=40  Identities=20%  Similarity=0.155  Sum_probs=35.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      ..++.||++.|.|. |.||+++|+.+...|++|++.+|+..
T Consensus       155 ~~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~  194 (352)
T 3gg9_A          155 GRVLKGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGRENS  194 (352)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHHH
T ss_pred             CccCCCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCCC
Confidence            35789999999986 89999999999999999999998853

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.43  E-value=0.029  Score=50.73  Aligned_cols=73  Identities=12%  Similarity=0.143  Sum_probs=55.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      .+++|.|+ |.+|+.+|+.|.++|+.|++++++++.++.+.+.+    .+.++..|-++++-++++=      ..+-|++
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----~~~~i~Gd~~~~~~L~~Ag------i~~ad~~   72 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY----DLRVVNGHASHPDVLHEAG------AQDADML   72 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----SCEEEESCTTCHHHHHHHT------TTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----CcEEEEEcCCCHHHHHhcC------CCcCCEE
Confidence            35777777 68999999999999999999999999888776654    3567888999887654221      1367777


Q ss_pred             EECC
Q 023553           99 VNNA  102 (280)
Q Consensus        99 i~~a  102 (280)
                      |...
T Consensus        73 ia~t   76 (461)
T 4g65_A           73 VAVT   76 (461)
T ss_dssp             EECC
T ss_pred             EEEc
Confidence            7544

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=95.40  E-value=0.09  Score=45.44  Aligned_cols=39  Identities=15%  Similarity=0.066  Sum_probs=35.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      .++.||++.|.|. |.||+++|+.+...|++|+..+|+.+
T Consensus       167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~  205 (340)
T 4dgs_A          167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTL  205 (340)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCcc
Confidence            5799999999987 89999999999999999999998864

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.39  E-value=0.038  Score=47.91  Aligned_cols=42  Identities=19%  Similarity=0.083  Sum_probs=37.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~   55 (280)
                      -.++.||++.|.|- |.||+++|+.+...|++|+..+|+....
T Consensus       168 g~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~  209 (345)
T 4g2n_A          168 GMGLTGRRLGIFGM-GRIGRAIATRARGFGLAIHYHNRTRLSH  209 (345)
T ss_dssp             BCCCTTCEEEEESC-SHHHHHHHHHHHTTTCEEEEECSSCCCH
T ss_pred             ccccCCCEEEEEEe-ChhHHHHHHHHHHCCCEEEEECCCCcch
Confidence            35799999999985 8999999999999999999999986543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=95.37  E-value=0.021  Score=61.74  Aligned_cols=81  Identities=15%  Similarity=0.252  Sum_probs=55.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      +|.+|||.||+||+|.+.++.....|++|+++.++.++.+.+.+....-+...++  |..+.+    +.+.+.+..  .+
T Consensus      1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~--~~~~~~----~~~~i~~~t~g~G 1740 (2512)
T 2vz8_A         1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFA--NSRDTS----FEQHVLRHTAGKG 1740 (2512)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEE--ESSSSH----HHHHHHHTTTSCC
T ss_pred             CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEe--cCCCHH----HHHHHHHhcCCCC
Confidence            6899999999999999999988888999999999888777665543211111122  333332    233444333  26


Q ss_pred             ccEEEECCC
Q 023553           95 LDIMVNNAG  103 (280)
Q Consensus        95 id~li~~ag  103 (280)
                      +|+++++.|
T Consensus      1741 vDvVld~~g 1749 (2512)
T 2vz8_A         1741 VDLVLNSLA 1749 (2512)
T ss_dssp             EEEEEECCC
T ss_pred             ceEEEECCC
Confidence            999998765

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.33  E-value=0.89  Score=41.62  Aligned_cols=150  Identities=11%  Similarity=0.090  Sum_probs=94.0

Q ss_pred             ccCCcEEEEEcCCC-hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH-HHh
Q 023553           15 RLVGRVALITGGAT-GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV-EKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~-giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   92 (280)
                      .+.|.+.++..... +++..++..|.++|..|+.+.-...                      .+.+.+.+.+.+.. ...
T Consensus        47 ~~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~----------------------~~~~~~~~~l~~~~~~~~  104 (525)
T 3qp9_A           47 GLSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPL----------------------GDRQRLAATLGEALAAAG  104 (525)
T ss_dssp             CCCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTT----------------------CCHHHHHHHHHHHHHHTT
T ss_pred             CCCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCC----------------------CCHHHHHHHHHhhhhccc
Confidence            35577777765543 3889999999999999887643322                      05666666665332 445


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +.++.+++..+.-..+........        ...+.+.+.++|++...   ....++..++..+..... .-..-...+
T Consensus       105 ~~~~~v~~l~~~~~~~~~~~~~~~--------~~g~~~~l~l~qal~~~---~~~~~l~~vT~ga~~~~~-~~~~~~p~~  172 (525)
T 3qp9_A          105 GAVDGVLSLLAWDESAHPGHPAPF--------TRGTGATLTLVQALEDA---GVAAPLWCVTHGAVSVGR-ADHVTSPAQ  172 (525)
T ss_dssp             SCCSEEEECGGGCCCBCTTSCTTC--------BHHHHHHHHHHHHHHHT---TCCSCEEEEEESCCCCBT-TBCCSCHHH
T ss_pred             CCCCeEEEcccCCCCccccccccc--------cchHHHHHHHHHHHHhc---CCCCcEEEEECCCEeCCC-CCCCCCHHH
Confidence            688999999876432111111111        13466778888887663   223667777665433221 112235679


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSP  198 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~p  198 (280)
                      +++-+|.+.++.|++..-++...+-+
T Consensus       173 a~l~Gl~r~~~~E~p~~~~~~vDl~~  198 (525)
T 3qp9_A          173 AMVWGMGRVAALEHPERWGGLIDLPS  198 (525)
T ss_dssp             HHHHHHHHHHHHHSTTTEEEEEEECS
T ss_pred             HHHHHHHHHHHHhCCCceEEEEEcCC
Confidence            99999999999999875555566543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.31  E-value=0.013  Score=56.73  Aligned_cols=76  Identities=20%  Similarity=0.266  Sum_probs=50.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      +|++|||.||+|++|.+.++.....|++|+.+.+++ +.+.+ + +.  .+ .++  |..+.+-    .+.+.+..  .+
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l-~-lg--a~-~v~--~~~~~~~----~~~i~~~t~g~G  412 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV-E-LS--RE-HLA--SSRTCDF----EQQFLGATGGRG  412 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS-C-SC--GG-GEE--CSSSSTH----HHHHHHHSCSSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh-h-cC--hh-hee--ecCChhH----HHHHHHHcCCCC
Confidence            689999999999999999998888999999998765 32211 1 11  11 122  3333322    33444443  26


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|+++++.|.
T Consensus       413 vDvVld~~gg  422 (795)
T 3slk_A          413 VDVVLNSLAG  422 (795)
T ss_dssp             CSEEEECCCT
T ss_pred             eEEEEECCCc
Confidence            9999998763

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.20  E-value=0.033  Score=47.47  Aligned_cols=68  Identities=10%  Similarity=0.058  Sum_probs=47.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      .|+++||.|+ |++|...++.....|++|++++ ++++.+.+ +++..   -.++  |  |   .    +++   -+++|
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~lGa---~~v~--~--d---~----~~v---~~g~D  201 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKRGV---RHLY--R--E---P----SQV---TQKYF  201 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHHTE---EEEE--S--S---G----GGC---CSCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHcCC---CEEE--c--C---H----HHh---CCCcc
Confidence            6899999999 9999999998888999999999 77666554 33431   1222  2  2   1    112   35899


Q ss_pred             EEEECCCC
Q 023553           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|.++|.
T Consensus       202 vv~d~~g~  209 (315)
T 3goh_A          202 AIFDAVNS  209 (315)
T ss_dssp             EEECC---
T ss_pred             EEEECCCc
Confidence            99999874

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.19  E-value=0.23  Score=42.08  Aligned_cols=110  Identities=11%  Similarity=0.178  Sum_probs=63.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++.|+|+ |.+|..++..|+..|.  .|++++++++.++.....+...    ....+..   .+.+           .+.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~-----------a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHS-----------ELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHH-----------HhC
Confidence            6889998 9999999999999998  8999999987665544444321    1122211   1211           124


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                      .-|++|..+|....+     ..+.   .+.+..|+.-...+++.+.++   ..++.+++++-
T Consensus        67 ~aDvVIi~~~~~~~~-----g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tN  117 (304)
T 2v6b_A           67 DAQVVILTAGANQKP-----GESR---LDLLEKNADIFRELVPQITRA---APDAVLLVTSN  117 (304)
T ss_dssp             TCSEEEECC--------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSS
T ss_pred             CCCEEEEcCCCCCCC-----CCcH---HHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecC
Confidence            889999999865321     1121   234455555555555555554   24566666553

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.13  E-value=0.19  Score=43.05  Aligned_cols=145  Identities=12%  Similarity=0.129  Sum_probs=79.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +..++.|+|+ |.+|..++..|+..+.  .+++.+.++++++.....+...    ..+.+.. |  +.+           
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~-----------   68 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYS-----------   68 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGG-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHH-----------
Confidence            3468999998 9999999999999876  7999999887766544433211    2222222 2  221           


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc--------cC
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI--------GG  162 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~--------~~  162 (280)
                      .+..-|++|..+|....+     ..+..   +.+..|+.-...+.+.+..+   ..++.+++++--....        +.
T Consensus        69 a~~~aDvVii~ag~~~~~-----g~~R~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~~~t~~~~k~s~~  137 (318)
T 1ez4_A           69 DCKDADLVVITAGAPQKP-----GESRL---DLVNKNLNILSSIVKPVVDS---GFDGIFLVAANPVDILTYATWKFSGF  137 (318)
T ss_dssp             GGTTCSEEEECCCC------------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHHHHHHHHHHHHCC
T ss_pred             HhCCCCEEEECCCCCCCC-----CCCHH---HHHHHHHHHHHHHHHHHHHh---CCCeEEEEeCCcHHHHHHHHHHHcCC
Confidence            234899999999975431     12221   23444444444444444443   3467888775422211        12


Q ss_pred             CCCccchh-hHHHHHHHHHHHHHHHC
Q 023553          163 LGPHAYTG-SKHAVLGLNKNVAAELG  187 (280)
Q Consensus       163 ~~~~~Y~~-sK~al~~~~~~la~e~~  187 (280)
                      |.....+. +-.=...+...+++.+.
T Consensus       138 p~~rviG~gt~LD~~R~~~~la~~lg  163 (318)
T 1ez4_A          138 PKERVIGSGTSLDSSRLRVALGKQFN  163 (318)
T ss_dssp             CGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             CHHHEEeccccchHHHHHHHHHHHhC
Confidence            22233333 22234555666666663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	280
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-75
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	8e-75
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-71
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	5e-69
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-68
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-68
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-67
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-64
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	3e-64
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	7e-64
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	8e-64
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-63
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-60
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	4e-60
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	5e-60
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-60
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-59
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-59
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-59
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-58
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	4e-58
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-58
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	8e-58
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-58
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	9e-58
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-57
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-57
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-57
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-57
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	8e-57
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-56
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-56
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	4e-56
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-55
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-53
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-52
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-52
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-52
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	5e-52
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-51
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-51
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	7e-51
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-50
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	5e-50
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	9e-49
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	4e-48
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-46
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-45
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-45
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	1e-42
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-41
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-40
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-40
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-39
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	3e-39
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	4e-38
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-37
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-36
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-33
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-33
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-33
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-32
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-27
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	2e-25
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-24
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-19
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-13
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-12
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-04
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	5e-04
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.002
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.004

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  228 bits (582), Expect = 2e-75
 Identities = 80/257 (31%), Positives = 125/257 (48%), Gaps = 12/257 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
              G+  L+TGGA GIG +  + F + GA V + D++   G++V +++GG     F   D
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGGA----FFQVD 56

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +  E +    V+      G +D++VNNA I+           L E+ +V ++N+    H 
Sbjct: 57  LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG--SALTVRLPEWRRVLEVNLTAPMHL 114

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
              AAR M     G I+++ SV G        AY  SK  ++ L +++A +L    IRVN
Sbjct: 115 SALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVN 174

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V+P A+AT   L  +      E     + +  A             +VA AVLFLAS++
Sbjct: 175 AVAPGAIATEAVLEAIALSPDPERTRRDWEDLHA-----LRRLGKPEEVAEAVLFLASEK 229

Query: 255 ARYISGTNLMVDGGFTS 271
           A +I+G  L VDGG T+
Sbjct: 230 ASFITGAILPVDGGMTA 246

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  227 bits (580), Expect = 8e-75
 Identities = 126/263 (47%), Positives = 169/263 (64%), Gaps = 7/263 (2%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL  +VA+ITGGA GIGE+T +LF ++GAKV IAD+ D+ GQ+VC ++G      F HCD
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCD 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VTK+EDV + VD T+ K G LDIM  N G+       I EA   +F++V DINV G F  
Sbjct: 63  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYGIRV 193
            KHAAR+MIP  KG+I+   S++    G G    YT +KHAVLGL  ++  ELG+YGIRV
Sbjct: 123 AKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRV 182

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           NCVSPY VA+ L       +    + +        + AN++GT L A DVA+AV +LA D
Sbjct: 183 NCVSPYIVASPLLTDVFGVDSSRVEEL------AHQAANLKGTLLRAEDVADAVAYLAGD 236

Query: 254 EARYISGTNLMVDGGFTSVNHSL 276
           E++Y+SG NL++DGG+T  N + 
Sbjct: 237 ESKYVSGLNLVIDGGYTRTNPAF 259

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  217 bits (555), Expect = 2e-71
 Identities = 82/258 (31%), Positives = 117/258 (45%), Gaps = 14/258 (5%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGEPDTFFCH 72
           QRL  ++A+ITGGA GIG +    F   GA + IAD+      +   ++LG         
Sbjct: 1   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRR--VLTVK 58

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDV++  DV +     +  FG  DI+VNNAGI   P     E    +++K F+INV   F
Sbjct: 59  CDVSQPGDVEAFGKQVISTFGRCDILVNNAGI--YPLIPFDELTFEQWKKTFEINVDSGF 116

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K     M     G II++ S    +       Y  +K A +G  + +A++LGK GI 
Sbjct: 117 LMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGIT 176

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN ++P  V T    A         D +      + R            D+  A  FLAS
Sbjct: 177 VNAIAPSLVRTATTEASALSAM--FDVLPNMLQAIPRLQ-------VPLDLTGAAAFLAS 227

Query: 253 DEARYISGTNLMVDGGFT 270
           D+A +I+G  L VDGG  
Sbjct: 228 DDASFITGQTLAVDGGMV 245

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  212 bits (540), Expect = 5e-69
 Identities = 87/260 (33%), Positives = 127/260 (48%), Gaps = 17/260 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VAL+TGGA+G+G   V+L    GAKV  +D+ +  GQQ+   LG    + F   D
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER--SMFVRHD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+ E D    +     + GTL+++VNNAGI      D+    L +F ++  IN + VF G
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIG 118

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK--YGIR 192
            +     M  +T G+II++ SV+  +       Y+ SK AV  L +  A    K  Y IR
Sbjct: 119 CQQGIAAMK-ETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIR 177

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVLFL 250
           VN + P  + T +  A LP+    E         V  +  +   G       +A  VLFL
Sbjct: 178 VNSIHPDGIYTPMMQASLPKGVSKE--------MVLHDPKLNRAGRAYMPERIAQLVLFL 229

Query: 251 ASDEARYISGTNLMVDGGFT 270
           ASDE+  +SG+ L  D    
Sbjct: 230 ASDESSVMSGSELHADNSIL 249

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  210 bits (535), Expect = 3e-68
 Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 15/260 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VA+ITGG  GIG +    F + GAKV I     ++G++  +S+G      F   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
            + E+      D T + FG +  +VNNAGI+      + E   +E+ K+  +N+ GVF G
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIA--VNKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 135 MKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE--LGKYGI 191
            +   + M  +  G +II++ S+ G +G     AY  SK AV  ++K+ A +  L  Y +
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDV 180

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN V P  + T L       EE              R     G     ND+A   ++LA
Sbjct: 181 RVNTVHPGYIKTPLVDDLPGAEEAMS----------QRTKTPMGHIGEPNDIAYICVYLA 230

Query: 252 SDEARYISGTNLMVDGGFTS 271
           S+E+++ +G+  +VDGG+T+
Sbjct: 231 SNESKFATGSEFVVDGGYTA 250

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  210 bits (536), Expect = 3e-68
 Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 9/263 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----GGEPDTFF 70
           R   +VA+ITG + GIG +T  LF + GAKV I        ++  Q +      E +   
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINV 128
              DVT +      +  T+ KFG LDI+VNNAG +   +         +  ++   ++N+
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           + V    K A   +       +      +G         Y+ +K A+    +N A +L +
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           +GIRVN +SP  VATG   A    EE ++                 G      D+A  + 
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP--AGVMGQPQDIAEVIA 239

Query: 249 FLASDE-ARYISGTNLMVDGGFT 270
           FLA  + + YI G  L+VDGG +
Sbjct: 240 FLADRKTSSYIIGHQLVVDGGSS 262

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  207 bits (529), Expect = 2e-67
 Identities = 87/259 (33%), Positives = 131/259 (50%), Gaps = 17/259 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           R  G+V ++TGG  GIG   VR F   GA+V I D  ++ G+ + Q L G     F  CD
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG---AVFILCD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT+E+DV + V  T+ +FG LD +VNNAG    P     E     F ++ ++N+ G +  
Sbjct: 60  VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQR-PEETSAQGFRQLLELNLLGTYTL 118

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K A   +  +++G +I+I S+ GAIG      Y  +K AV  + K +A +   YG+RVN
Sbjct: 119 TKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 177

Query: 195 CVSPYAVATGL---ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           C+SP  + T L     A +P+   +    +         A   G      +V  A +FLA
Sbjct: 178 CISPGNIWTPLWEELAALMPDPRASIREGM--------LAQPLGRMGQPAEVGAAAVFLA 229

Query: 252 SDEARYISGTNLMVDGGFT 270
           S+ A + +G  L+V GG  
Sbjct: 230 SE-ANFCTGIELLVTGGAE 247

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  201 bits (513), Expect = 1e-64
 Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 13/267 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----GGEPDTFF 70
           R   +  +ITG + GIG +T  LF + GA V I        ++  Q +      E     
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 61

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINV 128
              DVT E+     ++ T+++FG +D++VNNAG +   A      +  +  + K   +N+
Sbjct: 62  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           + V    K     ++      +     VAG         Y  +K A+    ++ A +L K
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANA 246
           +GIRVN VSP  V TG   A    ++ ++     F NF+A +      G       +AN 
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPDQASQK----FYNFMASHKECIPIGAAGKPEHIANI 237

Query: 247 VLFLASDEA-RYISGTNLMVDGGFTSV 272
           +LFLA      YI G +++ DGG + V
Sbjct: 238 ILFLADRNLSFYILGQSIVADGGTSLV 264

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (509), Expect = 3e-64
 Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 22/269 (8%)

Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGE 65
           + P ++R   R+AL+TG + GIG +  R   + G KV          +++   C+S G  
Sbjct: 1   ARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP 60

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
                  CD++ EED+ S       +   +DI +NNAG++      +     S ++ +F+
Sbjct: 61  GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA--RPDTLLSGSTSGWKDMFN 118

Query: 126 INVKGVFHGMKHAARIMIPQ--TKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKN 181
           +NV  +    + A + M  +    G II+I S++G   +     H Y+ +K+AV  L + 
Sbjct: 119 VNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEG 178

Query: 182 VAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           +  EL   +  IR  C+SP  V T  A   L +++  +          A     Q   L 
Sbjct: 179 LRQELREAQTHIRATCISPGVVETQFA-FKLHDKDPEK----------AAATYEQMKCLK 227

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             DVA AV+++ S  A    G   M   G
Sbjct: 228 PEDVAEAVIYVLSTPAHIQIGDIQMRPTG 256

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  199 bits (508), Expect = 7e-64
 Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 7/263 (2%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----GGEPDTFF 70
           R  G+  +ITG + GIG S   +F K GA+V I    ++  ++  Q +            
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DVT+       ++ T+ KFG +DI+VNNAG + A      +  +  ++K F +N + 
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           V    +     +I      +     VAG     G   Y  +K A+    +  A +L ++G
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           +RVN VSP AVATG  +  +   E   D +  F         + G      ++AN ++FL
Sbjct: 181 VRVNSVSPGAVATGF-MGAMGLPETASDKLYSFIGSRKECIPV-GHCGKPEEIANIIVFL 238

Query: 251 AS-DEARYISGTNLMVDGGFTSV 272
           A  + + YI G +++ DGG T V
Sbjct: 239 ADRNLSSYIIGQSIVADGGSTLV 261

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  199 bits (506), Expect = 8e-64
 Identities = 93/256 (36%), Positives = 124/256 (48%), Gaps = 14/256 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+  +ITGGA G+G    R     GA+V +ADV D  G    + LG      + H DV
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA--ARYQHLDV 60

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T EED    V    E+FG++D +VNNAGIS     +    +   F KV +IN+ GVF GM
Sbjct: 61  TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVE--RFRKVVEINLTGVFIGM 118

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K     M     G+I++I S AG +G     +Y  SK  V GL+K  A ELG   IRVN 
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V P    T            T +  +        N  M        ++A AV+ L SD +
Sbjct: 179 VHPGMTYT----------PMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTS 228

Query: 256 RYISGTNLMVDGGFTS 271
            Y++G  L VDGG+T+
Sbjct: 229 SYVTGAELAVDGGWTT 244

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  197 bits (501), Expect = 4e-63
 Identities = 67/258 (25%), Positives = 108/258 (41%), Gaps = 10/258 (3%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF-FCHCD 74
           L G  AL+TGG+ GIG   V      GA V                   +        CD
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65

Query: 75  VTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           ++   +    ++     F G L+I+VNNAGI      + ++  + ++  +  IN +  +H
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGI--VIYKEAKDYTVEDYSLIMSINFEAAYH 123

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
               A   +    +G ++ I SV+GA+       Y  +K A+  L + +A E  K  IRV
Sbjct: 124 LSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 183

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V P  +AT L    + + E+ E+        + R A          ++A  V FL   
Sbjct: 184 NGVGPGVIATSLVEMTIQDPEQKEN----LNKLIDRCA--LRRMGEPKELAAMVAFLCFP 237

Query: 254 EARYISGTNLMVDGGFTS 271
            A Y++G  + VDGG  +
Sbjct: 238 AASYVTGQIIYVDGGLMA 255

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  190 bits (483), Expect = 2e-60
 Identities = 66/264 (25%), Positives = 106/264 (40%), Gaps = 14/264 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCD 74
           L  +  L+TGG  GIG + V  F   GA +      +    +       +        CD
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65

Query: 75  VTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
            +   +    +      F G LDI++NN G   +      +    +F      N++  +H
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSK--PTLDYTAEDFSFHISTNLESAYH 123

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + A  ++     G II + S+AG +       Y+ +K A+  L +N+A E    GIR 
Sbjct: 124 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 183

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  +AT LA A   +E +              +    G      +V++ V FL   
Sbjct: 184 NAVAPAVIATPLAEAVYDDEFKKV----------VISRKPLGRFGEPEEVSSLVAFLCMP 233

Query: 254 EARYISGTNLMVDGGFTSVNHSLR 277
            A YI+G  + VDGG T    S +
Sbjct: 234 AASYITGQTICVDGGLTVNGFSYQ 257

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  189 bits (480), Expect = 4e-60
 Identities = 68/257 (26%), Positives = 111/257 (43%), Gaps = 19/257 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
              G  AL+TG   GIG  TV+  H  GAKV      ++    + +   G         D
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG---IEPVCVD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +   +    A +  +   G +D++VNNA +         E     F++ F +N++ VF  
Sbjct: 59  LGDWD----ATEKALGGIGPVDLLVNNAAL--VIMQPFLEVTKEAFDRSFSVNLRSVFQV 112

Query: 135 MKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            +  AR MI +   G+I+++ S+   +       Y+ +K A+  L K +A ELG + IRV
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 172

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  V T +      + E              +  +         DV N++LFL SD
Sbjct: 173 NSVNPTVVLTDMGKKVSADPEFARK---------LKERHPLRKFAEVEDVVNSILFLLSD 223

Query: 254 EARYISGTNLMVDGGFT 270
            +   SG  ++VD G+ 
Sbjct: 224 RSASTSGGGILVDAGYL 240

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  189 bits (482), Expect = 5e-60
 Identities = 75/260 (28%), Positives = 112/260 (43%), Gaps = 9/260 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +L G   LITGGA+G+G + V  F   GAKV + D       ++    G          D
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN--VLGIVGD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP---DIREADLSEFEKVFDINVKGV 131
           V   ED   A    V +FG +D ++ NAGI            E+  + F++VF INVKG 
Sbjct: 60  VRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGY 119

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            H +K     ++   +G +I   S AG     G   YT +KHA++GL + +A EL  Y +
Sbjct: 120 IHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-V 177

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN V    + + L             + V   + +     + G      +   A +F A
Sbjct: 178 RVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI-GRMPEVEEYTGAYVFFA 236

Query: 252 S-DEARYISGTNLMVDGGFT 270
           +  +A   +G  L  DGG  
Sbjct: 237 TRGDAAPATGALLNYDGGLG 256

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  188 bits (479), Expect = 6e-60
 Identities = 82/256 (32%), Positives = 124/256 (48%), Gaps = 18/256 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL  +  LITG A GIG +T+ LF K GA++   D+++   ++  +++G  P       D
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP----VVMD 57

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V     V       +   G LD +V+ AGI         +  L ++E V  +N+ G F  
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGI--TRDNFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K A+  M  +     I + +    +G LG   Y  S   V+GL + +A ELG++GIRVN
Sbjct: 116 AKAASEAMREK-NPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVN 174

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            ++P  + T +  A +PE+ R +          A  A   G      +VA A LFL SDE
Sbjct: 175 TLAPGFIETRM-TAKVPEKVREK----------AIAATPLGRAGKPLEVAYAALFLLSDE 223

Query: 255 ARYISGTNLMVDGGFT 270
           + +I+G  L VDGG T
Sbjct: 224 SSFITGQVLFVDGGRT 239

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  187 bits (476), Expect = 1e-59
 Identities = 69/257 (26%), Positives = 108/257 (42%), Gaps = 19/257 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L GR  L+TG   GIG  TV+  H  GA+V            + +   G         D
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG---IEPVCVD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +   E    A +  +   G +D++VNNA ++        E     F++ F++N++ V   
Sbjct: 61  LGDWE----ATERALGSVGPVDLLVNNAAVALLQP--FLEVTKEAFDRSFEVNLRAVIQV 114

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            +  AR +I +     I   S   +   +     Y  +K A+  L K +A ELG + IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  V T +  A   +  + +  +         N    G       V NA+LFL SD
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTML---------NRIPLGKFAEVEHVVNAILFLLSD 225

Query: 254 EARYISGTNLMVDGGFT 270
            +   +G+ L V+GGF 
Sbjct: 226 RSGMTTGSTLPVEGGFW 242

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (479), Expect = 2e-59
 Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 16/270 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE------PDT 68
            L G+VA++TGGATGIG++ V+   + G+ V IA  +    +     L            
Sbjct: 9   LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 68

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
               C++  EE+V + V  T++ FG ++ +VNN G  G             +  V + N+
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG--GQFLSPAEHISSKGWHAVLETNL 126

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            G F+  K      + +  G+I++I     A   L  H+   ++  V  L K++A E   
Sbjct: 127 TGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGA-ARAGVYNLTKSLALEWAC 185

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            GIR+NCV+P  + +  A+ +     ++       +    R            +V++ V 
Sbjct: 186 SGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIG-------VPEEVSSVVC 238

Query: 249 FLASDEARYISGTNLMVDGGFTSVNHSLRV 278
           FL S  A +I+G ++ VDGG +   HS  V
Sbjct: 239 FLLSPAASFITGQSVDVDGGRSLYTHSYEV 268

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  188 bits (479), Expect = 3e-59
 Identities = 60/264 (22%), Positives = 97/264 (36%), Gaps = 31/264 (11%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-------PD 67
           R  GRV L+TG   G+G +    F + GA V + D+  +       S   +         
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
                 +    E     V   ++ FG +D++VNNAGI              +++ +  ++
Sbjct: 64  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDR--SFSRISDEDWDIIQRVH 121

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           ++G F   + A   M  Q  G II   S +G  G  G   Y+ +K  +LGL   +  E  
Sbjct: 122 LRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR 181

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           K  I  N ++P A +       +PE+                        L    VA  V
Sbjct: 182 KNNIHCNTIAPNAGSRMTE-TVMPED--------------------LVEALKPEYVAPLV 220

Query: 248 LFLASDEARYISGTNLMVDGGFTS 271
           L+L  +     +G    V  G+  
Sbjct: 221 LWLCHESC-EENGGLFEVGAGWIG 243

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  184 bits (469), Expect = 3e-58
 Identities = 68/266 (25%), Positives = 110/266 (41%), Gaps = 23/266 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCH 72
             V +  ++TGG  GIG +  R     GA V +         +V + +G E    T    
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDV+  + V   +       G +  ++ NAG+  +      E    +F  V+D+NV GVF
Sbjct: 66  CDVSNTDIVTKTIQQIDADLGPISGLIANAGV--SVVKPATELTHEDFAFVYDVNVFGVF 123

Query: 133 HGMKHAARIMIPQTKGTIISI--------CSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           +  +  A++ + + +   I +         + +   G L    Y  SK A   L K +AA
Sbjct: 124 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAA 183

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E    GIRVN +SP  V T    AH+ ++          R+  A N  +        ++ 
Sbjct: 184 EWASAGIRVNALSPGYVNTDQ-TAHMDKK---------IRDHQASNIPL-NRFAQPEEMT 232

Query: 245 NAVLFLASDEARYISGTNLMVDGGFT 270
              + L SD A Y++G    +DGG  
Sbjct: 233 GQAILLLSDHATYMTGGEYFIDGGQL 258

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  184 bits (468), Expect = 4e-58
 Identities = 78/258 (30%), Positives = 121/258 (46%), Gaps = 14/258 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
           RL G+ A+ITG   GIG+     F   GA V ++D+  +    V   +       F C C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D+T E+++ +  D  + K G +DI+VNNAG  G   P   +  +++F + +++NV   FH
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGG---PKPFDMPMADFRRAYELNVFSFFH 124

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +  A  M     G I++I S+A     +   +Y  SK A   L +N+A +LG+  IRV
Sbjct: 125 LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRV 184

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N ++P A+ T    + +  E   +                        D+ANA LFL S 
Sbjct: 185 NGIAPGAILTDALKSVITPEIEQK----------MLQHTPIRRLGQPQDIANAALFLCSP 234

Query: 254 EARYISGTNLMVDGGFTS 271
            A ++SG  L V GG   
Sbjct: 235 AASWVSGQILTVSGGGVQ 252

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  184 bits (467), Expect = 5e-58
 Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 9/257 (3%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCD 74
           L G  AL+TGG+ GIG + V      GA+V      +    +  +    +  +     CD
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63

Query: 75  VTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           +    +    +      F G L+I+VNNAG+      + ++    ++  +   N +  +H
Sbjct: 64  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVV--IHKEAKDFTEKDYNIIMGTNFEAAYH 121

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + A  ++     G +I + S+AG         Y+ SK A+  + K++A E  K  IRV
Sbjct: 122 LSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRV 181

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  + T L    + +    ++ +  F           G      +V+  + FL   
Sbjct: 182 NSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP-----MGRAGKPQEVSALIAFLCFP 236

Query: 254 EARYISGTNLMVDGGFT 270
            A YI+G  +  DGGFT
Sbjct: 237 AASYITGQIIWADGGFT 253

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  183 bits (465), Expect = 8e-58
 Identities = 94/262 (35%), Positives = 138/262 (52%), Gaps = 21/262 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VAL++GGA G+G S VR     GAKV   D+ D  G+ +   L       + H D
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA--ARYVHLD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT+     +AVD  V  FG L ++VNNAGI      +  +  L+E++++ D+N+ GVF G
Sbjct: 61  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIE--DYALTEWQRILDVNLTGVFLG 118

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           ++   + M    +G+II+I S+ G  G +  H YT +K AV GL K+ A ELG  GIRVN
Sbjct: 119 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 178

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            + P  V T +    +PE+                     G      +V+N V++LASDE
Sbjct: 179 SIHPGLVKTPMT-DWVPEDIF---------------QTALGRAAEPVEVSNLVVYLASDE 222

Query: 255 ARYISGTNLMVDGGFT-SVNHS 275
           + Y +G   +VDGG    + H+
Sbjct: 223 SSYSTGAEFVVDGGTVAGLAHN 244

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (465), Expect = 9e-58
 Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 23/261 (8%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCD 74
           G+VAL+TG A GIG +        GAKV + D     G Q   +L        T F  CD
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V  ++ +       V+ FG LDI+VNNAG++          +   +EK   IN+  V  G
Sbjct: 63  VADQQQLRDTFRKVVDHFGRLDILVNNAGVN----------NEKNWEKTLQINLVSVISG 112

Query: 135 MKHAARIMIPQTK---GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV--AAELGKY 189
                  M  Q     G II++ S+AG +       Y  SKH ++G  ++   AA L   
Sbjct: 113 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNS 172

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+R+N + P  V T +  +   EE       + +++ +       G  L    +AN ++ 
Sbjct: 173 GVRLNAICPGFVNTAILESIEKEENM--GQYIEYKDHIKDMIKYYGI-LDPPLIANGLIT 229

Query: 250 LASDEARYISGTNLMVDGGFT 270
           L  D+A  ++G  + +     
Sbjct: 230 LIEDDA--LNGAIMKITTSKG 248

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  184 bits (467), Expect = 9e-58
 Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 9/266 (3%)

Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGE-PD 67
            P    L G+VAL+TG   GIG        + G KV +         ++V  ++     D
Sbjct: 10  GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD 69

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
                 +V   ED+    +  V+ FG LDI+ +N+G+       +++    EF++VF IN
Sbjct: 70  AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV--VSFGHVKDVTPEEFDRVFTIN 127

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAEL 186
            +G F   + A + +     G +I + S+ G    +  HA    SK A+    + +A ++
Sbjct: 128 TRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM 185

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG--FRNFVARNANMQGTELTANDVA 244
               I VN V+P  + T +  A   E     + +       + A   +         D+A
Sbjct: 186 ADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIA 245

Query: 245 NAVLFLASDEARYISGTNLMVDGGFT 270
             V FLAS++  +++G  + +DGG  
Sbjct: 246 RVVCFLASNDGGWVTGKVIGIDGGAC 271

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  183 bits (465), Expect = 1e-57
 Identities = 85/259 (32%), Positives = 132/259 (50%), Gaps = 7/259 (2%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFC 71
           R   RV LITGG +G+G +T       GAK+ + DV     +    ++     + +    
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 60

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV+ E  V + V  T E+FG +D   NNAGI G   P       +EF+KV  IN++GV
Sbjct: 61  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPT-ESFTAAEFDKVVSINLRGV 119

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F G++   +IM  Q  G +++  SV G  G      Y  +KH V+GL +N A E G+YGI
Sbjct: 120 FLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGI 179

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           R+N ++P A+ T + + +  ++   E+       F+  N         A ++A  V FL 
Sbjct: 180 RINAIAPGAIWTPM-VENSMKQLDPENPRKAAEEFIQVNP--SKRYGEAPEIAAVVAFLL 236

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD+A Y++ T + +DGG +
Sbjct: 237 SDDASYVNATVVPIDGGQS 255

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  182 bits (462), Expect = 2e-57
 Identities = 45/252 (17%), Positives = 89/252 (35%), Gaps = 9/252 (3%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           A++T      G  +     + G  V   D       ++ ++        +       E++
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-EAFAET----YPQLKPMSEQE 57

Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
               ++     +G +D++V+N   +    P I +  + ++    +      F  +   A 
Sbjct: 58  PAELIEAVTSAYGQVDVLVSNDIFAPEFQP-IDKYAVEDYRGAVEALQIRPFALVNAVAS 116

Query: 141 IMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA 200
            M  +  G II I S            YT ++     L   ++ ELG+Y I V  + P  
Sbjct: 117 QMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNY 176

Query: 201 VATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 260
           + +  +    P E    +        V +   +     T  ++   V FLAS    Y++G
Sbjct: 177 LHSEDSPYFYPTEPWKTNP--EHVAHVKKVTAL-QRLGTQKELGELVAFLASGSCDYLTG 233

Query: 261 TNLMVDGGFTSV 272
               + GGF  +
Sbjct: 234 QVFWLAGGFPMI 245

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (461), Expect = 3e-57
 Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 16/257 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+V ++T  A GIG++    F + GAKV   D+ ++  Q++ +  G +         
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
              ++           +   LD++ N AG        + + +  +++   ++NV+ ++  
Sbjct: 63  KQIDQFAN--------EVERLDVLFNVAGF--VHHGTVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +K     M+ Q  G II++ SVA ++ G+     Y+ +K AV+GL K+VAA+  + GIR 
Sbjct: 113 IKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRC 172

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           NCV P  V T      +      E+A   F           G   TA ++A   ++LASD
Sbjct: 173 NCVCPGTVDTPSLQERIQARGNPEEARNDF-----LKRQKTGRFATAEEIAMLCVYLASD 227

Query: 254 EARYISGTNLMVDGGFT 270
           E+ Y++G  +++DGG++
Sbjct: 228 ESAYVTGNPVIIDGGWS 244

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  182 bits (462), Expect = 3e-57
 Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 14/257 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
               +VAL+TG   GIG    ++  K  + V            V   +     ++     
Sbjct: 7   CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 66

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV+K+E++   ++  + +   +DI+VNNAGI+        + D  E+E V   N+  +F+
Sbjct: 67  DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKND--EWEDVLRTNLNSLFY 124

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +  ++ MI    G II+I S+ G  G +G   Y+ SK  V+G  K++A EL    I V
Sbjct: 125 ITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 184

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N ++P  +++ +      + ++   + +                 T  +VAN   FL+SD
Sbjct: 185 NAIAPGFISSDMTDKISEQIKKNIISNIPAGRMG-----------TPEEVANLACFLSSD 233

Query: 254 EARYISGTNLMVDGGFT 270
           ++ YI+G   ++DGG +
Sbjct: 234 KSGYINGRVFVIDGGLS 250

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  181 bits (459), Expect = 8e-57
 Identities = 78/259 (30%), Positives = 125/259 (48%), Gaps = 14/259 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHC 73
           L GRVAL+TGG+ G+G    +   + G  V +A        +  Q L  +   +T    C
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV+  E+V   ++   EKFG LD +VN AGI+        E  L EF +V ++N+ G ++
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN--RRHPAEEFPLDEFRQVIEVNLFGTYY 120

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAELGKYGIR 192
             + A  ++      +II+I S+      +   +    SK  V  L K +A E G+YGIR
Sbjct: 121 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIR 180

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN ++P    T +  A   + E+ +  +              G      D+    +FLAS
Sbjct: 181 VNVIAPGWYRTKMTEAVFSDPEKLDYML---------KRIPLGRTGVPEDLKGVAVFLAS 231

Query: 253 DEARYISGTNLMVDGGFTS 271
           +EA+Y++G  + VDGG+T+
Sbjct: 232 EEAKYVTGQIIFVDGGWTA 250

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  180 bits (458), Expect = 1e-56
 Identities = 69/258 (26%), Positives = 108/258 (41%), Gaps = 9/258 (3%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGE-PDTFFCHC 73
           L G+VAL TG   GIG        + GA V +         ++V   L            
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D++K  +V +  D  V  FG LD +++N+G+      D  E     F+KVF++N +G F 
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGM--EVWCDELEVTQELFDKVFNLNTRGQFF 121

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAELGKYGIR 192
             +   +    +  G II   S+A  + G+  HA    SK AV G  +  A + G  G+ 
Sbjct: 122 VAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVT 179

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVLFL 250
           VNC++P  V T +   +           +         ANM          D+  AV  L
Sbjct: 180 VNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL 239

Query: 251 ASDEARYISGTNLMVDGG 268
             +E+ +I+G  + + GG
Sbjct: 240 CQEESEWINGQVIKLTGG 257

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  179 bits (456), Expect = 1e-56
 Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 18/256 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+  L+TG A+GIG + + LF + GA +   D ++ L  +   +L  E        D
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE--AIAVVAD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+  + V +     +E+FG L  + + AG++ +        +   +EKV  +N+ G F  
Sbjct: 60  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLE--AWEKVLRVNLTGSFLV 117

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            + A  ++       +    +    +G  G   Y   K  V+GL + +A EL + G+RVN
Sbjct: 118 ARKAGEVLEEGGSLVLTGSVA---GLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVN 174

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            + P  + T +     P     E                        +VA A LFL S+E
Sbjct: 175 VLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAG-----------RPEEVAQAALFLLSEE 223

Query: 255 ARYISGTNLMVDGGFT 270
           + YI+G  L VDGG +
Sbjct: 224 SAYITGQALYVDGGRS 239

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  179 bits (454), Expect = 4e-56
 Identities = 78/260 (30%), Positives = 118/260 (45%), Gaps = 7/260 (2%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
           +  G+V L+TG    IG +T     + G  + + D+     ++   S+  +  +     C
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVC 61

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT EE V   VD  V  FG +D + NNAG  GA  P        +F +V  INV G FH
Sbjct: 62  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPS-DDFARVLTINVTGAFH 120

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            +K  +R MI Q  G I++  S+AG  G     AY  SK A++ L +  A +L  Y IRV
Sbjct: 121 VLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRV 180

Query: 194 NCVSPYAVATGLALAHLPE-EERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           N +SP  +  G       E + +           V     +    +      N++   V 
Sbjct: 181 NAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA 240

Query: 249 FLASDEARYISGTNLMVDGG 268
           FL  D++ +++G NL + GG
Sbjct: 241 FLLGDDSSFMTGVNLPIAGG 260

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  178 bits (452), Expect = 2e-55
 Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 13/261 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCH 72
              G+VA ITGG TG+G+    L    GA+  IA  + ++ +   + +  +         
Sbjct: 22  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 81

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDV   + V + V   ++  G  +I++NNA  +G           + ++ + DI + G  
Sbjct: 82  CDVRDPDMVQNTVSELIKVAGHPNIVINNA--AGNFISPTERLSPNAWKTITDIVLNGTA 139

Query: 133 -HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              ++   +++  Q     +SI ++    G         +K  V  ++K++AAE GKYG+
Sbjct: 140 FVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGM 199

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           R N + P  + T  A + L      E  M+G            G   T  ++AN   FL 
Sbjct: 200 RFNVIQPGPIKTKGAFSRLDPTGTFEKEMIG--------RIPCGRLGTVEELANLAAFLC 251

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           SD A +I+G  +  DGG   +
Sbjct: 252 SDYASWINGAVIKFDGGEEVL 272

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  171 bits (435), Expect = 3e-53
 Identities = 81/257 (31%), Positives = 122/257 (47%), Gaps = 15/257 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
             G++AL+TG + GIG +        GAKV      +N  Q +   LG          +V
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGAN--GKGLMLNV 59

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T    + S ++    +FG +DI+VNNAGI+        + +  E+  + + N+  VF   
Sbjct: 60  TDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDE--EWNDIIETNLSSVFRLS 117

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A E+   GI VN 
Sbjct: 118 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNV 177

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V+P  + T +  A   ++     A V                  A ++ANAV FLASDEA
Sbjct: 178 VAPGFIETDMTRALSDDQRAGILAQVPAGRLG-----------GAQEIANAVAFLASDEA 226

Query: 256 RYISGTNLMVDGGFTSV 272
            YI+G  L V+GG   V
Sbjct: 227 AYITGETLHVNGGMYMV 243

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  169 bits (430), Expect = 2e-52
 Identities = 72/255 (28%), Positives = 111/255 (43%), Gaps = 5/255 (1%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+ ALITG A GIG +    + + GA+V IAD+     +     +G          D
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA--ACAIALD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT +  +   V   ++++G++DI+VNNA +         E     ++++F INV G    
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPI--VEITRESYDRLFAINVSGTLFM 117

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAELGKYGIRV 193
           M+  AR MI   +G  I   +      G         +K AV+ L ++    L ++GI V
Sbjct: 118 MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINV 177

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N ++P  V          +    E+   G +      A   G    A D+    +FLA+ 
Sbjct: 178 NAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATP 237

Query: 254 EARYISGTNLMVDGG 268
           EA YI      VDGG
Sbjct: 238 EADYIVAQTYNVDGG 252

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  169 bits (429), Expect = 2e-52
 Identities = 65/256 (25%), Positives = 101/256 (39%), Gaps = 5/256 (1%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVT 76
             VAL+TG  +GIG    R   K G +V +    +   +   + L     +     CDV 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
              ++ + V   VE++G +D++VNNAG  G       E     +  V + N+ GVF   K
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGG--ATAELADELWLDVVETNLTGVFRVTK 119

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKYGIRVN 194
              +      +GT   +   +        H   Y+ SKH V+G  K +  EL + GI VN
Sbjct: 120 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 179

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V P  V T +A +         +                G  +  ++VA  V +L    
Sbjct: 180 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 239

Query: 255 ARYISGTNLMVDGGFT 270
           A  ++   L V GG  
Sbjct: 240 AAAVTAQALNVCGGLG 255

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (428), Expect = 3e-52
 Identities = 61/264 (23%), Positives = 99/264 (37%), Gaps = 37/264 (14%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
            + G + LITG   GIG  T   F K  +K+ + D+  +  ++      G          
Sbjct: 4   SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVV 63

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D +  ED+ S+      + G + I+VNNA        D+      + EK F++NV   F 
Sbjct: 64  DCSNREDIYSSAKKVKAEIGDVSILVNNA--GVVYTSDLFATQDPQIEKTFEVNVLAHFW 121

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY---G 190
             K     M     G I+++ S AG +      AY  SK A +G +K +  EL      G
Sbjct: 122 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 181

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL-- 248
           ++  C+ P  V TG                     F+   +   G  L   +V N ++  
Sbjct: 182 VKTTCLCPNFVNTG---------------------FIKNPSTSLGPTLEPEEVVNRLMHG 220

Query: 249 --------FLASDEARYISGTNLM 264
                   F+ S  A   +   ++
Sbjct: 221 ILTEQKMIFIPSSIAFLTTLERIL 244

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  168 bits (427), Expect = 5e-52
 Identities = 79/261 (30%), Positives = 117/261 (44%), Gaps = 8/261 (3%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGE--PDTFFCH 72
           L G+VA++TG  +GIG          GA + +    D    ++V   L  +      +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++K E V   VD  V + G +DI+VNNAGI       I +    +++ +  +N+  VF
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ--HTALIEDFPTEKWDAILALNLSAVF 119

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           HG   A   M  Q  G II+I S  G +      AY  +KH V+G  K  A E    GI 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 193 VNCVSPYAVATGLALAHLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
            N + P  V T L    +    E+   D     R  ++         +T   +    +FL
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVTPEQLGGTAVFL 238

Query: 251 ASDEARYISGTNLMVDGGFTS 271
           ASD A  I+GT + VDGG+T+
Sbjct: 239 ASDAAAQITGTTVSVDGGWTA 259

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  166 bits (422), Expect = 2e-51
 Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 16/254 (6%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGE-PDTFFCHCDVTK 77
           V ++TG + GIG++      K G KV +   +     ++V + +            DV+K
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E DV + +   ++ +GT+D++VNNAGI+        +    ++++V D+N+ GVF   + 
Sbjct: 63  EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKS--QWDEVIDLNLTGVFLCTQA 120

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
           A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A E     I VN V 
Sbjct: 121 ATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVC 180

Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA-SDEAR 256
           P  +A+ +      + E+     +                    +VA  V FLA S  A 
Sbjct: 181 PGFIASDMTAKLGEDMEKKILGTIPLGRTG-----------QPENVAGLVEFLALSPAAS 229

Query: 257 YISGTNLMVDGGFT 270
           YI+G    +DGG  
Sbjct: 230 YITGQAFTIDGGIA 243

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  167 bits (423), Expect = 2e-51
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 14/258 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGE-PDTFFCHC 73
           L G+V +ITG +TG+G+S    F    AKV +    +++    V + +     +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT E DV + V   +++FG LD+M+NNAG+         E  LS++ KV D N+ G F 
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH--EMSLSDWNKVIDTNLTGAFL 122

Query: 134 GMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           G + A +  +     GT+I++ SV   I       Y  SK  +  + + +A E    GIR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN + P A+ T +      + E+  D           +    G      ++A    +LAS
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADV---------ESMIPMGYIGEPEEIAAVAAWLAS 233

Query: 253 DEARYISGTNLMVDGGFT 270
            EA Y++G  L  DGG T
Sbjct: 234 SEASYVTGITLFADGGMT 251

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  165 bits (419), Expect = 7e-51
 Identities = 45/263 (17%), Positives = 81/263 (30%), Gaps = 28/263 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ--SLGGEPDTFFCH 72
            L  +  +      GIG  T R   K   K  +   +      + +  ++  + +  F  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 73  CDVT-KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            DVT    +    +    ++  T+DI++N AGI           D  + E+   IN  G+
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL----------DDHQIERTIAINFTGL 111

Query: 132 FHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            +           +     G I +ICSV G         Y+ SK AV+    ++A     
Sbjct: 112 VNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPI 171

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            G+    ++P    T L        +                  +     T+       +
Sbjct: 172 TGVTAYSINPGITRTPLVHTFNSWLDVEP---------RVAELLLSHPTQTSEQCGQNFV 222

Query: 249 FLASDEARYISGTNLMVDGGFTS 271
                     +G    +D G   
Sbjct: 223 KAIEA---NKNGAIWKLDLGTLE 242

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  164 bits (417), Expect = 1e-50
 Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 26/255 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           +  +  L+   + GIG +   +  + GA+V I    + L ++            +  CD+
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR--------YVVCDL 53

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
            K+      +DL  EK   +DI+V NAG   A   D    +  +F++  D     +   +
Sbjct: 54  RKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNE--DFKEAIDSLFLNMIKIV 105

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           ++    M  +  G I++I S +        +    ++ A+ G  K ++ E+  YGI VNC
Sbjct: 106 RNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNC 165

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V+P    T      L EE++ +            +           ++A+ V FL S++A
Sbjct: 166 VAPGWTETERVKELLSEEKKKQ----------VESQIPMRRMAKPEEIASVVAFLCSEKA 215

Query: 256 RYISGTNLMVDGGFT 270
            Y++G  ++VDGG +
Sbjct: 216 SYLTGQTIVVDGGLS 230

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  163 bits (413), Expect = 5e-50
 Identities = 74/254 (29%), Positives = 110/254 (43%), Gaps = 4/254 (1%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTK 77
           +VAL+TG   GIG++      K G  V IAD  D   + V   +            DV+ 
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            + V +AV+   +  G  D++VNNAG++  P   I        +KV++INVKGV  G++ 
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAGVA--PSTPIESITPEIVDKVYNINVKGVIWGIQA 119

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
           A      +  G  I          G      Y+ SK AV GL +  A +L   GI VN  
Sbjct: 120 AVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGY 179

Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
            P  V T +      +        +G+           G      DVA  V +LAS ++ 
Sbjct: 180 CPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD 239

Query: 257 YISGTNLMVDGGFT 270
           Y++G +L++DGG  
Sbjct: 240 YMTGQSLLIDGGMV 253

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  159 bits (404), Expect = 9e-49
 Identities = 75/253 (29%), Positives = 110/253 (43%), Gaps = 23/253 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
            V R  L+TGG  GIG +  +     G KV +        + +          F    DV
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL----------FGVEVDV 54

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  + V  A     E  G ++++V+NAG+S      +      +FEKV + N+ G F   
Sbjct: 55  TDSDAVDRAFTAVEEHQGPVEVLVSNAGLS--ADAFLMRMTEEKFEKVINANLTGAFRVA 112

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           + A+R M     G +I I SV+G  G      Y  SK  V+G+ +++A EL K  +  N 
Sbjct: 113 QRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANV 172

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V+P  + T +    L E  +            A          T  +VA  V FLAS++A
Sbjct: 173 VAPGYIDTDM-TRALDERIQQG----------ALQFIPAKRVGTPAEVAGVVSFLASEDA 221

Query: 256 RYISGTNLMVDGG 268
            YISG  + VDGG
Sbjct: 222 SYISGAVIPVDGG 234

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  158 bits (400), Expect = 4e-48
 Identities = 52/261 (19%), Positives = 100/261 (38%), Gaps = 15/261 (5%)

Query: 16  LVGRVALITG--GATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+ AL+ G      +G +      + GA+V ++   + L  +  +             
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKGV 131
           DVT++E++ +      E FG LD +V+    +   A      +    ++    +++   +
Sbjct: 66  DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSL 125

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
               + A  ++     G I+++   A        +    +K A+    + +A ELG  G+
Sbjct: 126 VAVARRAEPLLREG--GGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGV 183

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN +S   V T  A +     +  +                    +T  +V N  LFL 
Sbjct: 184 RVNAISAGPVRTVAARSIPGFTKMYDRVA---------QTAPLRRNITQEEVGNLGLFLL 234

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           S  A  I+G  + VD G+  +
Sbjct: 235 SPLASGITGEVVYVDAGYHIM 255

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  153 bits (387), Expect = 5e-46
 Identities = 67/272 (24%), Positives = 104/272 (38%), Gaps = 33/272 (12%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGE--PDTFFCHCDVT 76
            A+ITGGA  IG S     H+ G +V +     +   Q++   L          C  D++
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 77  K----EEDVCSAVDLTVEKFGTLDIMVNNAGISGA---------PCPDIREADLSEFEKV 123
                 +     +D +   FG  D++VNNA                    +   ++  ++
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIIS-----ICSVAGAIGGLGPHAYTGSKHAVLGL 178
           F  N       ++  AR           +     +C     +   G   YT +KHA+ GL
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            +  A EL    IRVN V+P       A+    +EE      +G              E 
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQS------------EA 230

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           +A  +A+A+ FL S +A YI+GT L VDGG  
Sbjct: 231 SAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 262

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  150 bits (380), Expect = 3e-45
 Identities = 63/259 (24%), Positives = 100/259 (38%), Gaps = 30/259 (11%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R AL+TGGA+G+G +        G +V + D++               D  +   DVT+E
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-----------DLIYVEGDVTRE 50

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-DLSEFEKVFDINVKGVFHGMKH 137
           EDV  AV    E+     ++                   L  F +V ++N+ G F+ ++ 
Sbjct: 51  EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 110

Query: 138 AARI------MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           AA             +G I++  SVA   G +G  AY  SK  V+ L    A EL  +GI
Sbjct: 111 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RV  V+P    T L      + + +  A V                    + A  VL + 
Sbjct: 171 RVVTVAPGLFDTPLLQGLPEKAKASLAAQV----------PFPPRLGRPEEYAALVLHIL 220

Query: 252 SDEARYISGTNLMVDGGFT 270
            +    ++G  + +DG   
Sbjct: 221 EN--PMLNGEVVRLDGALR 237

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  150 bits (380), Expect = 3e-45
 Identities = 56/259 (21%), Positives = 92/259 (35%), Gaps = 31/259 (11%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAK-------VCIADVQDNLGQQVCQSLGGE-PDTFF 70
            + LITG   GIG +    F +           + ++       +++      E   T  
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D++   DV       VE++G +D +VNNAG+       + +    +F+   + N+KG
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVG--RFGALSDLTEEDFDYTMNTNLKG 119

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            F   +    +M  Q  G I  I SVA          Y  SK    GL + +     K  
Sbjct: 120 TFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 179

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           +R+  V P AV T +    + +E                   MQ   +   D+A  V+  
Sbjct: 180 VRITDVQPGAVYTPM-WGKVDDE-------------------MQALMMMPEDIAAPVVQA 219

Query: 251 ASDEARYISG-TNLMVDGG 268
               +R +     L    G
Sbjct: 220 YLQPSRTVVEEIILRPTSG 238

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  144 bits (364), Expect = 1e-42
 Identities = 50/261 (19%), Positives = 95/261 (36%), Gaps = 16/261 (6%)

Query: 15  RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
            L G+  L+TG A+   I     +  H+ GA++      D L  +V +            
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS---EFEKVFDINVK 129
           CDV ++  + +      + +   D  V++ G +     D    +      F+   DI+  
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
                 K    ++ P +   ++++  +         +    +K ++    + +A  +G  
Sbjct: 122 SFVAMAKACRSMLNPGS--ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 179

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+RVN +S   + T            +                     +T  DV N+  F
Sbjct: 180 GVRVNAISAGPIRT---------LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF 230

Query: 250 LASDEARYISGTNLMVDGGFT 270
           L SD +  ISG  + VDGGF+
Sbjct: 231 LCSDLSAGISGEVVHVDGGFS 251

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  141 bits (356), Expect = 1e-41
 Identities = 39/259 (15%), Positives = 76/259 (29%), Gaps = 33/259 (12%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
            R  L+ GG   +G   V+ F      V   DV +N                      T+
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN-------EEASASVIVKMTDSFTE 54

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           + D  +A    +     +D ++  AG          ++     + ++  ++         
Sbjct: 55  QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNA-KSKSLFKNCDLMWKQSIWTSTISSHL 113

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG--KYGIRVNC 195
           A + +       +    + A   G  G   Y  +K AV  L +++A +      G     
Sbjct: 114 ATKHLKEGG--LLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIA 171

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V P  + T +    +PE +                     +      +        +   
Sbjct: 172 VLPVTLDTPMNRKSMPEADF-------------------SSWTPLEFLVETFHDWITGNK 212

Query: 256 RYISGTNLMV--DGGFTSV 272
           R  SG+ + V    G T +
Sbjct: 213 RPNSGSLIQVVTTDGKTEL 231

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (351), Expect = 2e-40
 Identities = 45/251 (17%), Positives = 85/251 (33%), Gaps = 13/251 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL--GGEPDTFFCH 72
            L G+  ++TG + GIG        K GA V +        Q+V       G     +  
Sbjct: 11  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 70

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
             +         V    +  G LD+++ N   +     ++   D+    K  ++N     
Sbjct: 71  GTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN--TSLNLFHDDIHHVRKSMEVNFLSYV 128

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG--KYG 190
                A  ++  Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E    +  
Sbjct: 129 VLTVAALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 187

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR---NANMQGTELTANDVANAV 247
           + +       + T  A+  +      + A        A           E    D +   
Sbjct: 188 VSITLCVLGLIDTETAMKAVSGIVHMQAAPK---EECALEIIKGGALRQEEVYYDSSLWT 244

Query: 248 LFLASDEARYI 258
             L  + +R I
Sbjct: 245 TLLIRNPSRKI 255

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (348), Expect = 2e-40
 Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 20/259 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            + G VA+ITGGA+G+G +T       GA   + D+ ++ G+   + LG           
Sbjct: 2   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVF 132
             K+     A+         + +      ++         +   L +F++V D+N+ G F
Sbjct: 62  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 121

Query: 133 HGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
           + ++  A  M          +G II+  SVA   G +G  AY+ SK  ++G+   +A +L
Sbjct: 122 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 181

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
              GIRV  ++P    T L    LPE+           NF+A             + A+ 
Sbjct: 182 APIGIRVMTIAPGLFGTPLL-TSLPEK---------VCNFLASQVPFPSRLGDPAEYAHL 231

Query: 247 VLFLASDEARYISGTNLMV 265
           V  +  +   +++G  + +
Sbjct: 232 VQAIIEN--PFLNGEVIRL 248

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (346), Expect = 1e-39
 Identities = 50/262 (19%), Positives = 85/262 (32%), Gaps = 20/262 (7%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADV-------QDNLGQQVCQSLGGEPDTFFC 71
            V LITG ++GIG           ++             Q  L +               
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV   + V +A +   E    + +     G+ G       +        V D+NV G 
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGED----AVASVLDVNVVGT 118

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              ++     M  +  G ++   SV G +G      Y  SK A+ GL +++A  L  +G+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 192 RVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQ----GTELTANDVAN 245
            ++ +    V T     +   PEE      +  F  F    A+ +           +VA 
Sbjct: 179 HLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE 238

Query: 246 AVLFLASDE---ARYISGTNLM 264
             L          RY +    +
Sbjct: 239 VFLTALRAPKPTLRYFTTERFL 260

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  136 bits (342), Expect = 3e-39
 Identities = 44/264 (16%), Positives = 93/264 (35%), Gaps = 22/264 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHK---HGAKVCIADVQDNLGQQVCQSLGGE---PDT 68
            L   V ++TG + G G +      +    G+ + ++   +++ +Q+ + LG +      
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 69  FFCHCDVTKEEDVCSAVDLTVE----KFGTLDIMVNNAGISG-APCPDIREADLSEFEKV 123
                D+  E  V   +    E    +     +++NNA   G      +   DL+E    
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 124 FDINVKGVFHGMKHAARIM--IPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + +N+  +              P    T+++I S+       G   Y   K A   L + 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           +AAE  +  +RV   +P  +   +      E  +  +     +   +      G  +   
Sbjct: 183 LAAE--EPSVRVLSYAPGPLDNDM-QQLARETSKDPELRSKLQKLKS-----DGALVDCG 234

Query: 242 DVANAVLFLASDEARYISGTNLMV 265
             A  +L L   +  + SG ++  
Sbjct: 235 TSAQKLLGLLQKDT-FQSGAHVDF 257

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  132 bits (333), Expect = 4e-38
 Identities = 58/283 (20%), Positives = 103/283 (36%), Gaps = 62/283 (21%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
            + +I+G ATGIG +T ++    G ++   D++D                     D++  
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI----------------ADLSTA 45

Query: 79  EDVCSAV-DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E    A+ D+  +    +D +V  AG+                  V  +N  G    M  
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGP---------QTKVLGNVVSVNYFGATELMDA 96

Query: 138 AAR---------------------------IMIPQTKGTIISICSVAGAIGGLGPH-AYT 169
                                         + +    G      ++    G  G + AY 
Sbjct: 97  FLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA 156

Query: 170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR 229
           GSK+A+    +  AA  G+ G+R+N ++P A  T L  A L +    E         +A+
Sbjct: 157 GSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGES--------IAK 208

Query: 230 NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
                G     +++A+ + FL S  A Y+ G  +++DGG  +V
Sbjct: 209 FVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV 251

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  132 bits (331), Expect = 1e-37
 Identities = 44/260 (16%), Positives = 93/260 (35%), Gaps = 11/260 (4%)

Query: 15  RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
            L G+  LI G A    I     +     GA +    + ++L ++V          +   
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYE 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV+KEE   S  +   +  G+LD +V++   +     +    + S+      + +    
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 121

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
                     +     +++++  +         +    +K A+    + +A +LGK+ IR
Sbjct: 122 LIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIR 181

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN +S   + T  +          +                    ++  +V NA ++L S
Sbjct: 182 VNALSAGPIRTLASSGIADFRMILKWNE---------INAPLRKNVSLEEVGNAGMYLLS 232

Query: 253 DEARYISGTNLMVDGGFTSV 272
             +  +SG    VD G+  +
Sbjct: 233 SLSSGVSGEVHFVDAGYHVM 252

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  128 bits (323), Expect = 1e-36
 Identities = 40/230 (17%), Positives = 71/230 (30%), Gaps = 27/230 (11%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
               ++TG   GIG   V+   K      +           ++                V
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVL--PLTV 60

Query: 76  TKEEDVCSAVDLTVEKFGT--LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           T ++ + + V    E  G+  L +++NNAG+  +      E + +   +  D+N   V  
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGT-NTEPNRAVIAEQLDVNTTSVVL 119

Query: 134 GMKHAARIMIPQTKGTIISICSV------------------AGAIGGLGPHAYTGSKHAV 175
             +    ++            SV                            AY  SK A+
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGF 223
               + +A +L    + V    P  V T L    A L  E+ T + +  F
Sbjct: 180 NMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSF 229

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 1e-33
 Identities = 52/291 (17%), Positives = 85/291 (29%), Gaps = 79/291 (27%)

Query: 19  RVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVT 76
            VAL+TGG  GIG + VR   +     V +       GQ   Q L  E     F   D+ 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             + + +  D   +++G LD++VNNAGI+             + E     N  G      
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFK--VADPTPFHIQAEVTMKTNFFGTRDVCT 121

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS------------------------- 171
               ++ PQ  G ++++ S+                                        
Sbjct: 122 ELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK 179

Query: 172 ----------------KHAVLGLNKNVAAELGKY----GIRVNCVSPYAVATGLALAHLP 211
                           K  V  L++  A +L +      I +N   P  V T +A     
Sbjct: 180 GVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKAT 239

Query: 212 EEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA--SDEARYISG 260
                                      +  + A   ++LA    +A    G
Sbjct: 240 --------------------------KSPEEGAETPVYLALLPPDAEGPHG 264

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  121 bits (302), Expect = 2e-33
 Identities = 51/264 (19%), Positives = 88/264 (33%), Gaps = 6/264 (2%)

Query: 15  RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGEPDTF-F 70
            L G+  L++G  T   I     R+  + GA++ +       L Q++   L  +      
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              +      +   V   +     LD +V++ G        I     + +  V       
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHIS 122

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            +     A  ++     G  I       +      +  T +K A+  +N+ VA E GKYG
Sbjct: 123 AYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYG 182

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMV--GFRNFVARNANMQGTELTANDVANAVL 248
           +R N V+   + T    A +      E             + A +      A  VA  V 
Sbjct: 183 VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVC 242

Query: 249 FLASDEARYISGTNLMVDGGFTSV 272
            L SD     +G  +  DGG  + 
Sbjct: 243 ALLSDWLPATTGDIIYADGGAHTQ 266

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  120 bits (302), Expect = 2e-33
 Identities = 66/289 (22%), Positives = 99/289 (34%), Gaps = 50/289 (17%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQ-----DNLGQQVCQSLGGEPDTFFCH-- 72
           VAL+TG A  +G S     H  G  VC+   +     + L   +         T      
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 73  -------------CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA------------ 107
                          VT        V      +G  D++VNNA                 
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 108 PCPDIREADLSEFEKVFDINVKGVF------HGMKHAARIMIPQTKGTIISICSVAGAIG 161
           PC   REA  +    +F  N    +                   T  +II++        
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMV 221
            LG   YT +K A+ GL ++ A EL    IRVN V P                  +D   
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL------------VDDMPP 231

Query: 222 GFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                      +   + +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 232 AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 280

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  116 bits (292), Expect = 3e-32
 Identities = 37/260 (14%), Positives = 82/260 (31%), Gaps = 35/260 (13%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+V ++ GG   +G + +  F K+G  V   D+  N                  + + T+
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSAN-------DQADSNILVDGNKNWTE 54

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           +E        +  +   +D +   AG          +  +   + +   +V       K 
Sbjct: 55  QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSA-SSKDFVKNADLMIKQSVWSSAIAAKL 113

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG--IRVNC 195
                  +  G +    + A          Y  +K AV  L  ++AA+         V  
Sbjct: 114 --ATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLT 171

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL-FLASDE 254
           + P  + T +    +P  +                     +    + ++  +L +     
Sbjct: 172 IMPVTLDTPMNRKWMPNADH-------------------SSWTPLSFISEHLLKWTTETS 212

Query: 255 ARYISGTNLMV--DGGFTSV 272
           +R  SG  L +  + G +++
Sbjct: 213 SRPSSGALLKITTENGTSTI 232

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  104 bits (259), Expect = 2e-27
 Identities = 43/269 (15%), Positives = 76/269 (28%), Gaps = 46/269 (17%)

Query: 19  RVALITGGATGIGESTVRLF---HKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
              LITG   G+G   V+      +    +          +++        +      D+
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62

Query: 76  TKEEDV--CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
              +      A    V K   L+++ NNAGI+      I      E       N      
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAP-KSARITAVRSQELLDTLQTNTVVPIM 121

Query: 134 GMKHAARIMIPQTKGTIISI-----------CSVAGAIGGL---GPHAYTGSKHAVLGLN 179
             K    ++    K                  S+ G+I G    G +AY  SK A+    
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           K+++ +L    I    + P  V T +  +  P                           +
Sbjct: 182 KSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPL----------------------DVPTS 219

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
              +   +  L   +    +G  +  DG 
Sbjct: 220 TGQIVQTISKLGEKQ----NGGFVNYDGT 244

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  101 bits (250), Expect = 2e-25
 Identities = 44/325 (13%), Positives = 90/325 (27%), Gaps = 71/325 (21%)

Query: 18  GRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----------- 64
             +  I G     G G    +   K   K+            +     G           
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 65  ----------------------EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNA 102
                                 E        ++ +   +    +L  +K+G ++++V++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 103 GISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG 162
             +     D+       +      +   +    K+   IM PQ+   I      +  +  
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSS-IISLTYHASQKVVP 180

Query: 163 LGPHAYTGSKHAVLGLNKNVAAELG-KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMV 221
                 + +K A+    + +A  LG  Y IR+N +S   + +  A A        E+   
Sbjct: 181 GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN 240

Query: 222 GFRNFVARNANMQGTEL----------------------------------TANDVANAV 247
             +N    + +                                         + D+ +  
Sbjct: 241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVA 300

Query: 248 LFLASDEARYISGTNLMVDGGFTSV 272
            FL S E+R I+G  + VD G   +
Sbjct: 301 SFLLSRESRAITGQTIYVDNGLNIM 325

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 97.1 bits (240), Expect = 3e-24
 Identities = 55/297 (18%), Positives = 90/297 (30%), Gaps = 44/297 (14%)

Query: 15  RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD----- 67
            L G+ A I G A   G G +  +     GA++ +      L         G+ D     
Sbjct: 5   DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

Query: 68  ----------------------------TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV 99
                                               +    V  A +   + FG++DI+V
Sbjct: 65  PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA 159
           ++          + E     +      +       + H   IM P      ++  +    
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI 184

Query: 160 IGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA 219
           I G G    +                  K  IRVN +S   + +  A A    +      
Sbjct: 185 IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT----- 239

Query: 220 MVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSL 276
                 +   NA +    LTA++V NA  FL S  A  I+G  + VD G  S+  +L
Sbjct: 240 ---MIEYSYNNAPI-QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVAL 292

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 82.2 bits (202), Expect = 1e-19
 Identities = 26/194 (13%), Positives = 55/194 (28%), Gaps = 22/194 (11%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             + G+ A++  G   +G  +  L    GA+V +   + +  Q    S+           
Sbjct: 19  GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAA 78

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           +   +     A             +     I       +     + ++    I +   ++
Sbjct: 79  ETADDASRAEA-------VKGAHFVFTAGAIG------LELLPQAAWQNESSIEIVADYN 125

Query: 134 GMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
                    I  T KG         GA+G +G       +  +  L ++         I 
Sbjct: 126 AQPPLGIGGIDATDKGKEYGGKRAFGALG-IGGLKLKLHRACIAKLFESSEGVFDAEEI- 183

Query: 193 VNCVSPYAVATGLA 206
                 Y +A  +A
Sbjct: 184 ------YKLAKEMA 191

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 67.0 bits (162), Expect = 1e-13
 Identities = 32/227 (14%), Positives = 63/227 (27%), Gaps = 23/227 (10%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFFCHC 73
               L+TGG  G+G    R   + GA   +    +    +   ++   L           
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
               + +    +   +     L  + +    +      +        E+           
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHA--AATLDDGTVDTLTGERIERASRAK----VL 122

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           G ++   +         +   S A A G  G   Y      + GL    A +    G+  
Sbjct: 123 GARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL----AQQRRSDGLPA 178

Query: 194 NCVSPYAVA-TGLALAHLPEEER--------TEDAMVGFRNFVARNA 231
             V+    A +G+A   + +  R         E A    +N + R  
Sbjct: 179 TAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAE 225

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 63.2 bits (152), Expect = 1e-12
 Identities = 18/190 (9%), Positives = 46/190 (24%), Gaps = 4/190 (2%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTK 77
           RVA + GG   +G+         G ++ +   ++   +           D          
Sbjct: 2   RVA-LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
             + C    LT+     +D   +   I       +    +                  + 
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNIL--REKIVVSPLVPVSRGAKGFTYSSERSAAEI 118

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
            A ++  +   + +     A          +          +K V   L      +  + 
Sbjct: 119 VAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLD 178

Query: 198 PYAVATGLAL 207
              ++    +
Sbjct: 179 AGPLSNSRLV 188

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 8/65 (12%), Positives = 17/65 (26%)

Query: 18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
          G+   +TG     G          GA V    +       + ++            D+  
Sbjct: 8  GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD 67

Query: 78 EEDVC 82
          +  + 
Sbjct: 68 QNKLL 72

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGEPDTFFCHCDVTK 77
          R AL+TG     G    +L  + G +V     + +   +   + LG E D  +   D+  
Sbjct: 1  RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 78 EEDVC 82
             V 
Sbjct: 61 ACSVQ 65

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 39.7 bits (92), Expect = 3e-04
 Identities = 32/188 (17%), Positives = 55/188 (29%), Gaps = 28/188 (14%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLG----QQVCQSLGGEPDTFFCHCDVTK 77
           LITGGA  IG + VR   K+     +    D L      +    +       F H D+  
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNI--DKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
             ++         +    D +++ A  S           ++      + N+ G +  ++ 
Sbjct: 62  SAEITRIF-----EQYQPDAVMHLAAESHVD------RSITGPAAFIETNIVGTYALLEV 110

Query: 138 AARIMIP---QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           A +         K            + G  PH         L L     A          
Sbjct: 111 ARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA--------YA 162

Query: 195 CVSPYAVA 202
             SPY+ +
Sbjct: 163 PSSPYSAS 170

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 3e-04
 Identities = 26/198 (13%), Positives = 49/198 (24%), Gaps = 28/198 (14%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTF------FC 71
            VALITG     G        + G +V  I     +      + L   P           
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
           + D+T    +   ++    +    +I    A        D         E   D++  G 
Sbjct: 62  YGDLTDSTCLVKIIN----EVKPTEIYNLGAQSHVKISFD-------LAEYTADVDGVGT 110

Query: 132 FHGMKHAARIMIPQTKGTI-ISICSVAGAIGG--------LGPH-AYTGSKHAVLGLNKN 181
              +       +  +      S   + G +            P   Y  +K     +  N
Sbjct: 111 LRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVN 170

Query: 182 VAAELGKYGIRVNCVSPY 199
                  + +     +  
Sbjct: 171 FREAYNLFAVNGILFNHE 188

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 38.6 bits (88), Expect = 5e-04
 Identities = 27/138 (19%), Positives = 40/138 (28%), Gaps = 13/138 (9%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGEPDTFFCHCDVTKEED 80
           LITGG   +G +        G  + + D     G       L    +  F H D+  + D
Sbjct: 4   LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKND 63

Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
           V   +          D   + A              +      F+INV G  + +  A R
Sbjct: 64  VTRLI-----TKYMPDSCFHLA------GQVAMTTSIDNPCMDFEINVGGTLN-LLEAVR 111

Query: 141 IMIPQTKGTIISICSVAG 158
                      S   V G
Sbjct: 112 QYNSNCNIIYSSTNKVYG 129

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 37.1 bits (85), Expect = 0.002
 Identities = 28/199 (14%), Positives = 52/199 (26%), Gaps = 32/199 (16%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIAD------VQDNLGQQVCQSLGGEPDTFFCHC 73
           VALITG     G        + G +V            + +           P     + 
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D++   ++   +     +    D + N   +S               E   D++  G   
Sbjct: 63  DLSDTSNLTRIL-----REVQPDEVYNLGAMSHVAVS------FESPEYTADVDAMGTLR 111

Query: 134 GMKHAARIMIPQTKGTII--SICSVAGAIGG--------LGPH-AYTGSKHAVLGLNKNV 182
            +  A R +  + K      S   + G +            P   Y  +K     +  N 
Sbjct: 112 -LLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNY 170

Query: 183 AAELGKYGIRVNCVSPYAV 201
                 YG+       +  
Sbjct: 171 RE---SYGMYACNGILFNH 186

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 36.5 bits (83), Expect = 0.002
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCHCDVTKEE 79
           L+TGG+  IG  T     ++G  V I D   N  + V   +   G     F   D+  E 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63

Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGISGAP 108
            +       +     +D +++ AG+    
Sbjct: 64  LMTE-----ILHDHAIDTVIHFAGLKAVG 87

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.1 bits (81), Expect = 0.004
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 18 GRVALITGGATGIGESTVRLFHKHGAKVCIAD 49
          G   ++ GG    G +T     K   +VCI D
Sbjct: 1  GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD 32

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	280
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.86
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.83
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.8
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.78
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.77
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.76
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.74
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.74
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.74
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.73
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.73
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.73
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.72
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.72
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.72
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.72
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.71
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.71
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.7
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.7
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.67
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.65
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.64
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.55
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.32
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.32
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.31
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.19
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.19
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.16
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.08
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.94
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.28
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.13
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.02
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.0
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.99
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.98
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.98
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.96
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.9
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.89
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.86
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.81
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.74
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.71
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.71
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.62
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.57
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.51
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.47
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.43
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.41
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.39
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.32
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.31
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.23
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.16
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.13
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.13
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.1
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.06
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.06
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.01
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.96
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.87
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.86
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.79
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.73
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.72
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.68
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.58
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.58
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.53
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.48
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.47
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.4
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.37
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.33
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.31
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.29
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.28
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.26
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.19
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.17
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.13
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.07
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.95
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.94
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.91
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.84
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.75
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.74
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.71
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	95.7
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.69
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.69
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.69
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.68
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.67
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.64
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.6
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.53
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.41
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.4
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	95.37
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	95.35
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.2
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.03
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.0
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.94
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.92
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.92
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.77
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.73
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.65
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.56
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.51
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.46
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.46
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.4
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.37
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.34
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.28
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.24
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.88
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	93.81
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	93.72
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	93.67
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	93.58
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.53
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.48
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.41
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.3
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.17
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.14
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	93.03
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	92.97
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.91
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.72
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.7
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.57
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	92.56
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.45
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.27
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.18
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.09
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.97
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.95
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	91.88
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.85
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	91.4
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.21
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.03
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	90.77
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	90.7
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	90.52
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	90.51
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	90.42
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	90.38
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.3
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	90.28
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	90.13
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	90.12
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.11
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	90.07
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.02
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	89.94
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	89.91
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	89.84
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	89.34
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	89.17
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	88.79
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	88.5
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	88.35
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	88.34
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	88.28
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	88.25
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	88.08
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	87.95
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	87.91
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	87.61
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	87.53
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	87.47
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	87.45
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	87.41
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.41
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	87.31
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.29
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	87.06
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	87.05
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	87.02
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.81
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	86.58
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	86.35
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	86.27
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	86.19
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	86.13
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	85.66
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	85.66
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	85.54
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	85.21
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	84.77
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	84.38
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	83.76
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	83.16
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	83.11
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	83.0
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	82.96
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	82.92
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	82.9
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	82.87
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	82.83
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	82.6
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	82.54
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	82.5
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	82.26
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	81.22
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	80.91
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	80.75
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	80.2

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9e-58  Score=382.68  Aligned_cols=243  Identities=33%  Similarity=0.495  Sum_probs=223.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ||+||+++||||++|||+++|+.|+++|++|++++|+++.++++.++++  .+...+.||++++++++++++++.+++|+
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG--ANGKGLMLNVTDPASIESVLEKIRAEFGE   78 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--CCCcEEEEEecCHHHhhhhhhhhhcccCC
Confidence            6899999999999999999999999999999999999999998888875  35678899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      ||++|||||....  .++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||.++..+.++..+|++||+|
T Consensus        79 iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  156 (243)
T d1q7ba_          79 VDILVNNAGITRD--NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAG  156 (243)
T ss_dssp             CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             cceehhhhhhccc--cccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHH
Confidence            9999999999766  88999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++|++++|.|++++|||||+|+||+++|++.+...++.          ....... .+.+|+.+|+|+|++++||+|++
T Consensus       157 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~----------~~~~~~~-~pl~R~~~pedvA~~v~fL~S~~  225 (243)
T d1q7ba_         157 LIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQ----------RAGILAQ-VPAGRLGGAQEIANAVAFLASDE  225 (243)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHH----------HHHHHTT-CTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhH----------HHHHHhc-CCCCCCCCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999987654321          1112222 34599999999999999999999


Q ss_pred             CCceeecEEEeCCCcccc
Q 023553          255 ARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~  272 (280)
                      ++|+||++|.+|||++++
T Consensus       226 s~~itGq~i~vdGG~~~v  243 (243)
T d1q7ba_         226 AAYITGETLHVNGGMYMV  243 (243)
T ss_dssp             GTTCCSCEEEESTTSSCC
T ss_pred             hcCCcCCeEEECCCeEeC
Confidence            999999999999998864

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.4e-56  Score=381.16  Aligned_cols=256  Identities=49%  Similarity=0.794  Sum_probs=230.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.....+.++.||++++++++++++++.+++|+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999999999999999999987777888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc-cchhhHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~-~Y~~sK~  173 (280)
                      +|++|||||+....+..+.+.+.++|++++++|+.++++++|+++|+|++++.|++|+++|..+..+.++.. .|++||+
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKa  162 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKH  162 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHH
Confidence            999999999876543568899999999999999999999999999999999999999999999998776654 8999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+++|++++|.||+++|||||+|+||+++|++..+....+...      ...+..+...+.+++.+|+|||++++||+|+
T Consensus       163 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~------~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~  236 (268)
T d2bgka1         163 AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSR------VEELAHQAANLKGTLLRAEDVADAVAYLAGD  236 (268)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHH------HHHHHHHTCSSCSCCCCHHHHHHHHHHHHSG
T ss_pred             HHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHH------HHHHHHhccccCCCCcCHHHHHHHHHHHhCh
Confidence            9999999999999999999999999999999988766543221      2222233445668999999999999999999


Q ss_pred             CCCceeecEEEeCCCcccccCcc
Q 023553          254 EARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      ++.|+||++|.+|||++.++|.+
T Consensus       237 ~s~~itGq~i~VDGG~t~~~p~~  259 (268)
T d2bgka1         237 ESKYVSGLNLVIDGGYTRTNPAF  259 (268)
T ss_dssp             GGTTCCSCEEEESTTGGGCCTHH
T ss_pred             hhCCccCceEEECcCcccCCCCC
Confidence            99999999999999999998864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.7e-57  Score=383.23  Aligned_cols=253  Identities=26%  Similarity=0.358  Sum_probs=202.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.. ..++.++.||++++++++++++++.++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999888877753 357889999999999999999999999


Q ss_pred             h-CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           92 F-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      + |++|++|||||+...  .++.+.+.++|++++++|+.++++++|+++|.|++++.|+||++||..+..+.++...|++
T Consensus        83 ~~g~idilvnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~a  160 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSA  160 (259)
T ss_dssp             HTTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHH
T ss_pred             hCCCcccccccccccCC--CchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccc
Confidence            8 789999999999866  8899999999999999999999999999999999888999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+.+|+++||.|++++|||||+|+||+++|++.......+.         .+..... .+++|+.+|+|||++++||
T Consensus       161 sKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~---------~~~~~~~-~pl~R~~~pedvA~~v~fL  230 (259)
T d1xq1a_         161 TKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF---------KKVVISR-KPLGRFGEPEEVSSLVAFL  230 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------------CCGGGGHHHHHHH
T ss_pred             cccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHH---------HHHHHhC-CCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999876544321         1111222 3459999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccccCccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      +|++++|+||++|.+|||++..+++|+
T Consensus       231 ~S~~s~~iTG~~i~vDGG~s~~g~~~~  257 (259)
T d1xq1a_         231 CMPAASYITGQTICVDGGLTVNGFSYQ  257 (259)
T ss_dssp             TSGGGTTCCSCEEECCCCEEETTEEEC
T ss_pred             hCchhcCCcCcEEEeCCCEECCCCCCC
Confidence            999999999999999999999888765

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1e-56  Score=377.99  Aligned_cols=247  Identities=32%  Similarity=0.493  Sum_probs=219.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..  ..++.++.||++++++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999888877766532  357888999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-cCCCCccchh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GGLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-~~~~~~~Y~~  170 (280)
                      +|+||+||||||+...  .++.+.+.++|++.+++|+.++++++|.++|+|++++.|+||+++|..+.. +.++..+|++
T Consensus        81 ~g~iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~a  158 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAA  158 (251)
T ss_dssp             HSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHH
Confidence            9999999999998755  889999999999999999999999999999999999999999999987654 6778899999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+++||.|++++|||||+|+||+++|++.+......+.       .. ..... .+++|+.+|+|+|++++||
T Consensus       159 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~-------~~-~~~~~-~pl~R~~~pedvA~~v~fL  229 (251)
T d1vl8a_         159 SKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEK-------LD-YMLKR-IPLGRTGVPEDLKGVAVFL  229 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHH-------HH-HHHHT-CTTSSCBCGGGGHHHHHHH
T ss_pred             HHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHH-------HH-HHHhc-CCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999997655433211       11 12222 3459999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCccc
Q 023553          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|++++|+||++|.+|||++.
T Consensus       230 ~S~~a~~itG~~i~vDGG~ta  250 (251)
T d1vl8a_         230 ASEEAKYVTGQIIFVDGGWTA  250 (251)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hCchhCCCcCcEEEeCcCeeC
Confidence            999999999999999999863

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.2e-56  Score=377.81  Aligned_cols=245  Identities=27%  Similarity=0.418  Sum_probs=220.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++... .++.++.+|+++++++.++++++.++
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999999888887543 57889999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +|++|++|||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.++..+.++..+|++|
T Consensus        85 ~g~iDilvnnag~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~as  162 (251)
T d2c07a1          85 HKNVDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSS  162 (251)
T ss_dssp             CSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             cCCceeeeeccccccc--cccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHH
Confidence            9999999999998766  88999999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++|+|+||.|++++|||||+|+||+++|++.....++          ..+..... .+++|+.+|+|+|++++||+
T Consensus       163 Kaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~----------~~~~~~~~-~pl~R~~~pedvA~~v~fL~  231 (251)
T d2c07a1         163 KAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ----------IKKNIISN-IPAGRMGTPEEVANLACFLS  231 (251)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH----------HHHHHHTT-CTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHH----------HHHHHHhc-CCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999997665321          11222233 34599999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcc
Q 023553          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+++.|+||++|.+|||++
T Consensus       232 S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         232 SDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             SGGGTTCCSCEEEESTTSC
T ss_pred             CchhCCCcCcEEEECCCcC
Confidence            9999999999999999975

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=5.7e-56  Score=373.57  Aligned_cols=244  Identities=34%  Similarity=0.540  Sum_probs=222.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++....++.++.||++++++++++++++.+++|+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            48999999999999999999999999999999999999999999888877678999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCc-eEEEEccccccccCCCCccchhhHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g-~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ||+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.| +||++||.++..+.++...|++||+
T Consensus        83 iDiLVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa  160 (251)
T d1zk4a1          83 VSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             ceEEEeccccccc--cchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence            9999999999866  889999999999999999999999999999999887754 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHH--HCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          174 AVLGLNKNVAAE--LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       174 al~~~~~~la~e--~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+.+|++++|.|  +.++|||||+|+||+++|++.......+...        .  .....+++|+.+|+|+|++++||+
T Consensus       161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~--------~--~~~~~pl~R~~~pedvA~~v~fL~  230 (251)
T d1zk4a1         161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAM--------S--QRTKTPMGHIGEPNDIAYICVYLA  230 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHH--------T--STTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHH--------H--HHhCCCCCCCcCHHHHHHHHHHHh
Confidence            999999999998  5789999999999999999987654332111        1  122345599999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcc
Q 023553          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+++.|+||+.|.+|||++
T Consensus       231 S~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         231 SNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             SGGGTTCCSCEEEESTTGG
T ss_pred             CchhCCCcCcEEEECcccc
Confidence            9999999999999999986

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=1.7e-56  Score=378.13  Aligned_cols=253  Identities=33%  Similarity=0.516  Sum_probs=221.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh---CCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++   ....++.++.||++++++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999998887776655   33457889999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +|+||+||||||+.... .++.+.+.++|++++++|+.++++++|+++|.|++++.|+||++||.++..+.++..+|++|
T Consensus        81 ~G~iDiLVnnAG~~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  159 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA  159 (258)
T ss_dssp             HSCCSEEEECCCCCCCC-BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             hCCCCEEEECCcccccC-CchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHH
Confidence            99999999999986432 67899999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+.+|+++||.|++++|||||+|+||+++|++.......... +.. +...+.... ..+++|+.+|+|+|++++||+
T Consensus       160 Kaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~-~~~-~~~~~~~~~-~~pl~R~~~p~dvA~~v~fL~  236 (258)
T d1iy8a_         160 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDP-ENP-RKAAEEFIQ-VNPSKRYGEAPEIAAVVAFLL  236 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCT-TCH-HHHHHHHHT-TCTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCc-ccH-HHHHHHHHh-cCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999997654322111 001 111122222 234599999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+.++|+||++|.+|||++.
T Consensus       237 S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         237 SDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CchhcCCcCceEEcCcchhc
Confidence            99999999999999999974

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.1e-56  Score=376.91  Aligned_cols=246  Identities=31%  Similarity=0.498  Sum_probs=223.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.. ..++.+++||++++++++++++++.++
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999999998888887754 357889999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +|++|++|||||+...  .++ +.+.++|++++++|+.++++++|.++|+|++++.|+||++||.++..+.++..+|++|
T Consensus        86 ~g~iDilvnnAG~~~~--~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~as  162 (255)
T d1fmca_          86 LGKVDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASS  162 (255)
T ss_dssp             HSSCCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEeeeCCcCCCC--Ccc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhH
Confidence            9999999999998765  555 7899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+.+|+++||.|++++|||||+|+||+++|++.......+.        ...+ .+ ..+++|+.+|+|+|++++||+
T Consensus       163 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~--------~~~~-~~-~~pl~R~g~pedvA~~v~fL~  232 (255)
T d1fmca_         163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEI--------EQKM-LQ-HTPIRRLGQPQDIANAALFLC  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHH--------HHHH-HH-TCSSCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHH--------HHHH-Hh-cCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999877654321        1112 22 344599999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+.+.|+||++|.+|||+.+
T Consensus       233 S~~s~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         233 SPAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             SGGGTTCCSCEEEESTTSCC
T ss_pred             CchhcCCcCCEEEECcCccc
Confidence            99999999999999999864

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2.2e-56  Score=377.80  Aligned_cols=252  Identities=25%  Similarity=0.353  Sum_probs=226.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.. ..++.++.||++++++++++++++.++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999888888754 357788999999999999999999999


Q ss_pred             hC-CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           92 FG-TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++ ++|++|||||+...  .++.+.+.++|++++++|+.+++++++.++|.|++++.|+||+++|..+..+.++...|++
T Consensus        83 ~~~~idilvnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  160 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGA  160 (259)
T ss_dssp             TTTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hCCCceEEEECCceecc--CccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHH
Confidence            86 79999999998765  8899999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|+|++|.|++++|||||+|+||+++|++.+.........+    ....+ .. ..+++|+.+|+|+|++++||
T Consensus       161 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~----~~~~~-~~-~~pl~R~g~pedvA~~v~fL  234 (259)
T d2ae2a_         161 TKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKE----NLNKL-ID-RCALRRMGEPKELAAMVAFL  234 (259)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHH----HHHHH-HH-TSTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHH----HHHHH-Hh-cCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999876554332211    12222 22 34459999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|+.+.|+||++|.+|||+...
T Consensus       235 ~S~~s~~itG~~i~VDGG~~a~  256 (259)
T d2ae2a_         235 CFPAASYVTGQIIYVDGGLMAN  256 (259)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGC
T ss_pred             hCchhCCCcCcEEEECCCeEee
Confidence            9999999999999999998764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=3.5e-56  Score=374.02  Aligned_cols=244  Identities=32%  Similarity=0.432  Sum_probs=208.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.. ++..+..  ..++.++.||++++++++++++++.+++|
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   79 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVISTFG   79 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999999999999999987543 3333333  35788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +||+||||||+...  .++.+.+.++|++++++|+.++++++|+++|.|++++.|+||++||.++..+.++..+|++||+
T Consensus        80 ~iDilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  157 (247)
T d2ew8a1          80 RCDILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKA  157 (247)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhc
Confidence            99999999999765  8899999999999999999999999999999999988999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+.+|+++||.|++++|||||+|+||+++|++..........         +.......+++|+.+|+|+|++++||+|+
T Consensus       158 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~---------~~~~~~~~~l~r~~~pedvA~~v~fL~S~  228 (247)
T d2ew8a1         158 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMF---------DVLPNMLQAIPRLQVPLDLTGAAAFLASD  228 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------------CTTSSSCSCCCTHHHHHHHHHHTSG
T ss_pred             cHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhH---------HHHHHHhccCCCCCCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999998765433211         11122233458999999999999999999


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      .+.|+||++|.+|||+.+
T Consensus       229 ~s~~itG~~i~vDGG~~~  246 (247)
T d2ew8a1         229 DASFITGQTLAVDGGMVR  246 (247)
T ss_dssp             GGTTCCSCEEEESSSCCC
T ss_pred             hhcCCcCCeEEECCCEec
Confidence            999999999999999874

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.9e-56  Score=372.44  Aligned_cols=239  Identities=38%  Similarity=0.607  Sum_probs=221.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      -.|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.  .+..+++||++++++++++++++.+++|
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--DAARYVHLDVTQPAQWKAAVDTAVTAFG   79 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--CcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            35899999999999999999999999999999999999999998888875  4677889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++++++|+.++++++|.++|.|++++.|+||++||..+..+.++...|+++|+
T Consensus        80 ~idilinnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  157 (244)
T d1nffa_          80 GLHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF  157 (244)
T ss_dssp             CCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCeEEEECCcccCC--CchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHH
Confidence            99999999998765  8899999999999999999999999999999999988999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+++|+|++|.|++++|||||+|+||+++|++........                ...+++|+.+|+|+|++++||+|+
T Consensus       158 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~----------------~~~pl~R~~~p~diA~~v~fL~s~  221 (244)
T d1nffa_         158 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDI----------------FQTALGRAAEPVEVSNLVVYLASD  221 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTC----------------SCCSSSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHH----------------HhccccCCCCHHHHHHHHHHHhCh
Confidence            9999999999999999999999999999999975442211                123459999999999999999999


Q ss_pred             CCCceeecEEEeCCCcccc
Q 023553          254 EARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++|+||++|.+|||+..+
T Consensus       222 ~s~~itG~~i~vDGG~~ag  240 (244)
T d1nffa_         222 ESSYSTGAEFVVDGGTVAG  240 (244)
T ss_dssp             GGTTCCSCEEEESTTGGGS
T ss_pred             hhCCCcCCEEEECCCeecc
Confidence            9999999999999999864

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.7e-56  Score=377.98  Aligned_cols=253  Identities=31%  Similarity=0.423  Sum_probs=221.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      |.|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.  .++.++.||++++++++++++++.+++|
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~--~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   78 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG--PAACAIALDVTDQASIDRCVAELLDRWG   78 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            35899999999999999999999999999999999999999999888885  4678899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +||++|||||+...  .++.+.+.++|++.+++|+.++++++++++|.|.++ +.|+||++||.++..+.++...|++||
T Consensus        79 ~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  156 (256)
T d1k2wa_          79 SIDILVNNAALFDL--APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK  156 (256)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CccEEEeecccccc--cccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhh
Confidence            99999999998865  889999999999999999999999999999986554 569999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhh-hhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA-MVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      +|+++|++++|.|++++|||||+|+||+++|++...........+.. .......... ..+++|+.+|+|+|++++||+
T Consensus       157 aal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~PlgR~~~p~evA~~v~fL~  235 (256)
T d1k2wa_         157 AAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGA-AVPFGRMGRAEDLTGMAIFLA  235 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHH-HSTTSSCBCHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHh-cCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999976543221111000 0111122222 334599999999999999999


Q ss_pred             CCCCCceeecEEEeCCCccc
Q 023553          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++.|+||+.|.+|||.++
T Consensus       236 S~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         236 TPEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             SGGGTTCCSCEEEESTTSSC
T ss_pred             CchhCCccCceEEECcchhh
Confidence            99999999999999999876

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.9e-56  Score=378.71  Aligned_cols=252  Identities=31%  Similarity=0.465  Sum_probs=211.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      |+||++|||||++|||+++|+.|+++|++|++++|++ +.+++..+++..  ..++.++.||++++++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            7899999999999999999999999999999999975 455555554422  3578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      |+||+||||||+...  .++.+.+.++|+++|++|+.++++++++++|+|++++.|+||+++|.++..+.++..+|++||
T Consensus        82 G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1x1ta1          82 GRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcEEEeecccccC--CchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhh
Confidence            999999999999766  889999999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh--hhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE--DAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|+.+|+++||.|++++|||||+|+||+++|++............  .......+..... .|.+|+.+|+|+|++++||
T Consensus       160 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Pl~R~g~pediA~~v~fL  238 (260)
T d1x1ta1         160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK-QPSLQFVTPEQLGGTAVFL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHH-CTTCCCBCHHHHHHHHHHH
T ss_pred             hhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhc-CCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999876544321111  1111122222333 3459999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcc
Q 023553          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +|+.+.|+||++|.+|||++
T Consensus       239 ~S~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         239 ASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HSGGGTTCCSCEEEESTTGG
T ss_pred             hChhhCCCcCCEEEECcchh
Confidence            99999999999999999985

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.8e-56  Score=376.62  Aligned_cols=243  Identities=37%  Similarity=0.511  Sum_probs=221.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.  .++.+++||++++++++++++++.+++|+
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG--DAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG--GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CceEEEEcccCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999999999888887764  46788999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.++..+.++..+|++||+|
T Consensus        80 iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  157 (254)
T d1hdca_          80 VDGLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             CCEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             ccEEEecCccccc--cccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHH
Confidence            9999999999766  88999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCC-CHHHHHHHHHHhcCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~i~~l~s~  253 (280)
                      +.+|+++||.|++++|||||+|+||+++|++..+........          .. ...+++|+. +|+|||++++||+|+
T Consensus       158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~----------~~-~~~pl~R~g~~PedvA~~v~fL~S~  226 (254)
T d1hdca_         158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEG----------NY-PNTPMGRVGNEPGEIAGAVVKLLSD  226 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTT----------SC-TTSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHH----------HH-hCCCCCCCCCCHHHHHHHHHHHhch
Confidence            999999999999999999999999999999987654332111          11 223448886 699999999999999


Q ss_pred             CCCceeecEEEeCCCcccc
Q 023553          254 EARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++.|+||++|.+|||++..
T Consensus       227 ~a~~itG~~i~vDGG~t~g  245 (254)
T d1hdca_         227 TSSYVTGAELAVDGGWTTG  245 (254)
T ss_dssp             GGTTCCSCEEEESTTTTTS
T ss_pred             hhCCCCCceEEeCCCccCC
Confidence            9999999999999999864

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=2.8e-56  Score=377.24  Aligned_cols=249  Identities=31%  Similarity=0.438  Sum_probs=220.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..||+||++|||||++|||+++|+.|+++|++|++++|+.+ .+++..+++.. ..++.+++||++++++++++++++.+
T Consensus         2 ~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            35799999999999999999999999999999999999864 55556666543 35788899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCc-eEEEEccccccccCCCCccch
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g-~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      ++|+||+||||||+..+  .++.+.+.++|++++++|+.++++++|+++|+|++++.+ +|+++||.++..+.++..+|+
T Consensus        82 ~~G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~  159 (261)
T d1geea_          82 EFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA  159 (261)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCCEeeccceecCC--cchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccc
Confidence            99999999999999766  889999999999999999999999999999999887755 589999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +||+|+.+|+++||.|++++|||||+|+||+++|++.......++        ....... ..+++|+.+|+|+|++++|
T Consensus       160 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~--------~~~~~~~-~~pl~R~~~pediA~~v~f  230 (261)
T d1geea_         160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPE--------QRADVES-MIPMGYIGEPEEIAAVAAW  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHH--------HHHHHHT-TCTTSSCBCHHHHHHHHHH
T ss_pred             cCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHH--------HHHHHHh-cCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999765432211        1112222 3345999999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccc
Q 023553          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+|+++.|+||++|.+|||+++.
T Consensus       231 L~S~~s~~itG~~i~vDGG~sl~  253 (261)
T d1geea_         231 LASSEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhCchhcCCcCCeEEECCCeeCC
Confidence            99999999999999999999875

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.1e-56  Score=372.05  Aligned_cols=245  Identities=32%  Similarity=0.474  Sum_probs=214.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++..+ ..+...    ..+++||++++++++++++++.+++|+
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~~----~~~~~~Dv~~~~~v~~~~~~~~~~~G~   76 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAIG----GAFFQVDLEDERERVRFVEEAAYALGR   76 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHHT----CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHcC----CeEEEEeCCCHHHHHHHHHHHHHhcCC
Confidence            379999999999999999999999999999999999987644 334433    356899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      ||+||||||+..+  .++.+.+.++|++++++|+.++++++|+++|+|++++.|+||+++|..+..+.++..+|+++|+|
T Consensus        77 iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  154 (248)
T d2d1ya1          77 VDVLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG  154 (248)
T ss_dssp             CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred             CCeEEEeCcCCCC--CChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHH
Confidence            9999999999866  88999999999999999999999999999999999989999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +.+|++++|.|++++|||||+|+||+++|++..+........+.    ........ .+++|+++|+|+|++++||+|++
T Consensus       155 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~----~~~~~~~~-~pl~R~~~pedia~~v~fL~S~~  229 (248)
T d2d1ya1         155 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPER----TRRDWEDL-HALRRLGKPEEVAEAVLFLASEK  229 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC------------CHHHHTT-STTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHH----HHHHHHhc-CCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999997654332211111    11222233 34599999999999999999999


Q ss_pred             CCceeecEEEeCCCccc
Q 023553          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ++|+||++|.+|||++.
T Consensus       230 s~~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         230 ASFITGAILPVDGGMTA  246 (248)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hcCCCCcEEEcCcCccc
Confidence            99999999999999864

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.9e-55  Score=368.23  Aligned_cols=241  Identities=32%  Similarity=0.476  Sum_probs=215.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      |+|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..++++    ..++.||++++++++++++++.+++|
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~Dv~~~~~v~~~~~~~~~~~g   76 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG----AHPVVMDVADPASVERGFAEALAHLG   76 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT----CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----CeEEEEecCCHHHHHHHHHHHHHhcC
Confidence            45899999999999999999999999999999999999998888777553    56789999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +||+||||||+...  .++.+.+.++|++++++|+.++++++|+++|.|++++.+.++++|| .+..+.++..+|++||+
T Consensus        77 ~iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKa  153 (242)
T d1ulsa_          77 RLDGVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMA  153 (242)
T ss_dssp             SCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHH
T ss_pred             CceEEEECCccccc--CchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHH
Confidence            99999999999765  8899999999999999999999999999999998888788888777 56778889999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+.+|+++||.|++++|||||+|+||+++|++.....+.          ..+..... .+++|+.+|+|+|++++||+|+
T Consensus       154 al~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~----------~~~~~~~~-~pl~R~~~pedia~~v~fL~S~  222 (242)
T d1ulsa_         154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEK----------VREKAIAA-TPLGRAGKPLEVAYAALFLLSD  222 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHH----------HHHHHHHT-CTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHH----------HHHHHHhc-CCCCCCCCHHHHHHHHHHHhch
Confidence            999999999999999999999999999999997654221          11222223 4459999999999999999999


Q ss_pred             CCCceeecEEEeCCCcccc
Q 023553          254 EARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++|+||++|.+|||++.+
T Consensus       223 ~s~~itG~~i~vDGG~t~g  241 (242)
T d1ulsa_         223 ESSFITGQVLFVDGGRTIG  241 (242)
T ss_dssp             GGTTCCSCEEEESTTTTTT
T ss_pred             hhCCCCCcEEEECCCccCC
Confidence            9999999999999999864

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=5.4e-56  Score=375.29  Aligned_cols=251  Identities=27%  Similarity=0.378  Sum_probs=219.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.. ..++.+++||++++++++++++++.+++|+||
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            89999999999999999999999999999999999999888887754 35788999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhc--ccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIM--IPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l--~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +||||||+...  .++.+.+.++|++++++|+.++++++|+++|+|  ++++.|+||+++|..+..+.++..+|++||+|
T Consensus        82 ilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaa  159 (257)
T d2rhca1          82 VLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHG  159 (257)
T ss_dssp             EEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             EEEecccccCC--CChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHH
Confidence            99999999766  889999999999999999999999999999974  45667899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhh-hhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      +.+|+|+||.|++++|||||+|+||+++|+|............. ..+...+...+. .|++|+.+|+|+|++++||+|+
T Consensus       160 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~PlgR~~~pedia~~v~fL~S~  238 (257)
T d2rhca1         160 VVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITAR-VPIGRYVQPSEVAEMVAYLIGP  238 (257)
T ss_dssp             HHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTT-STTSSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhc-CCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999997654321111000 001122222233 4459999999999999999999


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ++.|+||+.|.+|||+..
T Consensus       239 ~s~~itG~~i~vDGG~~~  256 (257)
T d2rhca1         239 GAAAVTAQALNVCGGLGN  256 (257)
T ss_dssp             GGTTCCSCEEEESTTCCC
T ss_pred             hhcCCcCceEEECcCccc
Confidence            999999999999999854

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-55  Score=371.26  Aligned_cols=247  Identities=34%  Similarity=0.532  Sum_probs=217.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.   .+.++.||++++++++++++++.+++|+
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~---~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP---GAVFILCDVTQEDDVKTLVSETIRRFGR   79 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT---TEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC---CCeEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5899999999999999999999999999999999999999888887764   5778999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      ||+||||||+.... .++.+.+.++|++++++|+.++++++|+++|+|+++ +|+||++||..+..+.++..+|+++|+|
T Consensus        80 iDilVnnAG~~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaa  157 (250)
T d1ydea1          80 LDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGA  157 (250)
T ss_dssp             CCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCEEEecccccccc-cccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHHhh
Confidence            99999999976432 678899999999999999999999999999999754 5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +.+|+++||.|++++|||||+|+||+++|++...........+.   ...+...  ..+++|+.+|+|+|++++||+|+ 
T Consensus       158 l~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~---~~~~~~~--~~pl~R~g~p~eva~~v~fL~Sd-  231 (250)
T d1ydea1         158 VTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRA---SIREGML--AQPLGRMGQPAEVGAAAVFLASE-  231 (250)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHH---HHHHHHH--TSTTSSCBCHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHH---HHHHHHh--cCCCCCCCCHHHHHHHHHHHhCc-
Confidence            99999999999999999999999999999997654332211111   1222222  23459999999999999999986 


Q ss_pred             CCceeecEEEeCCCcccc
Q 023553          255 ARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~  272 (280)
                      +.|+||++|.+|||++++
T Consensus       232 a~~itG~~i~vDGG~~lG  249 (250)
T d1ydea1         232 ANFCTGIELLVTGGAELG  249 (250)
T ss_dssp             CTTCCSCEEEESTTTTSC
T ss_pred             cCCCcCCeEEECCCcccC
Confidence            789999999999999863

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.8e-55  Score=367.22  Aligned_cols=234  Identities=31%  Similarity=0.417  Sum_probs=204.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.+..          ..+..++||++++++++++++++.+++|+
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   73 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------KGLFGVEVDVTDSDAVDRAFTAVEEHQGP   73 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------TTSEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------cCceEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            58999999999999999999999999999999999987653          24667899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|+||||||+...  .++.+.+.++|++++++|+.+++.++|.++|.|++++.|+||++||.++..+.++..+|++||+|
T Consensus        74 iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  151 (237)
T d1uzma1          74 VEVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAG  151 (237)
T ss_dssp             CSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHH
T ss_pred             ceEEEeeeccccc--ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHH
Confidence            9999999999765  88999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++|+++|+.|++++|||||+|+||+++|++.+...+.          ..+...+. .+++|+.+|||+|++++||+|++
T Consensus       152 l~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~----------~~~~~~~~-~pl~R~~~pedvA~~v~fL~S~~  220 (237)
T d1uzma1         152 VIGMARSIARELSKANVTANVVAPGYIDTDMTRALDER----------IQQGALQF-IPAKRVGTPAEVAGVVSFLASED  220 (237)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHH----------HHHHHGGG-CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHH----------HHHHHHhc-CCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999997654211          11222233 34599999999999999999999


Q ss_pred             CCceeecEEEeCCCccc
Q 023553          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      +.|+||++|.+|||+++
T Consensus       221 s~~itG~~i~vdGG~~m  237 (237)
T d1uzma1         221 ASYISGAVIPVDGGMGM  237 (237)
T ss_dssp             GTTCCSCEEEESTTTTC
T ss_pred             hcCCcCCeEEECCCCCC
Confidence            99999999999999764

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=2.3e-55  Score=370.87  Aligned_cols=250  Identities=31%  Similarity=0.461  Sum_probs=217.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      |++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.. ..++.++.||++++++++++++++.+++|+||+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            7889999999999999999999999999999999999888887754 357889999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHHHHH
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ||||||+...  .++.+.+.++|++++++|+.++++++|+++|+|.+++ .++|+++||.++..+.++...|++||+|+.
T Consensus        82 lVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~  159 (255)
T d1gega_          82 IVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  159 (255)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEeccccccc--CcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHH
Confidence            9999998765  8899999999999999999999999999999876664 578999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhh-hhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      +|+++||.|++++|||||+|+||+++|++............ ...........+ ..+++|+.+|+|+|++++||+|+++
T Consensus       160 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pl~R~~~peevA~~v~fL~S~~a  238 (255)
T d1gega_         160 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAK-RITLGRLSEPEDVAACVSYLASPDS  238 (255)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHT-TCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHh-cCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999999999999999765432211100 000111122222 3445999999999999999999999


Q ss_pred             CceeecEEEeCCCccc
Q 023553          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      .|+||+.|.+|||+.+
T Consensus       239 ~~itG~~i~vDGG~~~  254 (255)
T d1gega_         239 DYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             TTCCSCEEEESSSSSC
T ss_pred             CCccCcEEEecCCEEe
Confidence            9999999999999864

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=5.3e-55  Score=367.91  Aligned_cols=246  Identities=35%  Similarity=0.550  Sum_probs=220.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.  .+..+++||++++++++++++++.+++|+
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   80 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG--ERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--TTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4899999999999999999999999999999999999999998888875  46778899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++++++|+.++++++++++|+|+++ .|+||++||.++..+.++..+|++||+|
T Consensus        81 iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaa  157 (253)
T d1hxha_          81 LNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCeEEecccccCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHH
Confidence            9999999999766  889999999999999999999999999999999654 5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCC--CCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh--hccCCCCCCCHHHHHHHHHHh
Q 023553          175 VLGLNKNVAAELGK--YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR--NANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       175 l~~~~~~la~e~~~--~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +.+|++++|.|+++  +|||||+|+||+++|++.....+.....+        +..+  ...+.+++.+|+|+|++++||
T Consensus       158 l~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~--------~~~~~~~~~~~gr~~~pedvA~~v~fL  229 (253)
T d1hxha_         158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKE--------MVLHDPKLNRAGRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHH--------HHBCBTTTBTTCCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHH--------HHHhCccccccCCCCCHHHHHHHHHHH
Confidence            99999999999987  56999999999999999876655432211        1111  122358999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCccccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      +|+++.|+||+.|.+|||+..++
T Consensus       230 ~S~~s~~itG~~i~VDGG~~~~g  252 (253)
T d1hxha_         230 ASDESSVMSGSELHADNSILGMG  252 (253)
T ss_dssp             HSGGGTTCCSCEEEESSSCTTTT
T ss_pred             hChhhCCCcCcEEEECccHhhCc
Confidence            99999999999999999998765

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.9e-54  Score=365.53  Aligned_cols=254  Identities=24%  Similarity=0.350  Sum_probs=220.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++... ..+.++.||++++++++++++++.+++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999999999888888777543 577888999999999999999999999


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           93 -GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       +++|++|||||....  .++.+.+.++|++++++|+.+++.+.++++|.|.+++.|+||++||.++..+.++...|+++
T Consensus        82 ~g~idilinnag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  159 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS  159 (258)
T ss_dssp             TSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCcEEEecccccccc--CccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHH
Confidence             689999999999866  89999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+|+++|++.||+|++++|||||+|+||+++|++............+    ..+..... .+++|+++|+|+|++++||+
T Consensus       160 K~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~----~~~~~~~~-~plgR~~~pediA~~v~fL~  234 (258)
T d1ae1a_         160 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKE----EIDNFIVK-TPMGRAGKPQEVSALIAFLC  234 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHH----HHHHHHHH-STTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHH----HHHHHHhc-CCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998776554322221    22222223 34599999999999999999


Q ss_pred             CCCCCceeecEEEeCCCcccccC
Q 023553          252 SDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      |++++|+||++|.+|||++..++
T Consensus       235 S~~s~~itG~~i~vDGG~s~~g~  257 (258)
T d1ae1a_         235 FPAASYITGQIIWADGGFTANGG  257 (258)
T ss_dssp             SGGGTTCCSCEEEESTTGGGCSC
T ss_pred             ChhhCCCcCcEEEeCCCeeccCC
Confidence            99999999999999999998665

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=3e-55  Score=371.07  Aligned_cols=251  Identities=31%  Similarity=0.486  Sum_probs=220.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++... .++..+.||++++++++++++++.+++|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999999999999998888887543 5788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+.... .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.++..+.++..+|++||+
T Consensus        82 ~iDilVnnaG~~~~~-~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1zema1          82 KIDFLFNNAGYQGAF-APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG  160 (260)
T ss_dssp             CCCEEEECCCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCeehhhhcccccc-CccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHH
Confidence            999999999986432 6799999999999999999999999999999999888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcch-------hhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE-------RTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      |+.+|+++||.|++++|||||+|+||+++|++..+......       ....+.. ..+..... .|++|+++|+|+|++
T Consensus       161 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~Pl~R~g~pedvA~~  238 (260)
T d1zema1         161 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKV-VAQQMIGS-VPMRRYGDINEIPGV  238 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHH-HHHHHHHT-STTSSCBCGGGSHHH
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHH-HHHHHHhc-CCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999998654321110       0001111 11122222 345999999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCC
Q 023553          247 VLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      ++||+|+.+.|+||++|.+|||
T Consensus       239 v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         239 VAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHhCchhcCccCCeEEeCCC
Confidence            9999999999999999999998

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=6.3e-55  Score=365.54  Aligned_cols=240  Identities=31%  Similarity=0.492  Sum_probs=214.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +++|||||++|||+++|+.|+++|++|++.+ |+++.+++..+++.. ..++.+++||++++++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999875 456666666666543 35788899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      +||||||....  .++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.++..+.++...|++||+|+.
T Consensus        82 iLVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~  159 (244)
T d1edoa_          82 VVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             EEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             ccccccccccc--cchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHH
Confidence            99999999866  8899999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc-CCCC
Q 023553          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA-SDEA  255 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~-s~~~  255 (280)
                      +|+++|+.|++++|||||+|+||+++|++.....++          ..+.... ..+++|+.+|+|+|++++||+ |+++
T Consensus       160 ~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~----------~~~~~~~-~~pl~R~~~p~dvA~~v~fLa~S~~a  228 (244)
T d1edoa_         160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED----------MEKKILG-TIPLGRTGQPENVAGLVEFLALSPAA  228 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH----------HHHHHHT-SCTTCSCBCHHHHHHHHHHHHHCSGG
T ss_pred             HChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHH----------HHHHHHh-cCCCCCCcCHHHHHHHHHHHHCCchh
Confidence            999999999999999999999999999997664321          1122222 344599999999999999996 8889


Q ss_pred             CceeecEEEeCCCccc
Q 023553          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      .|+||++|.+|||++.
T Consensus       229 ~~itG~~i~vdGG~si  244 (244)
T d1edoa_         229 SYITGQAFTIDGGIAI  244 (244)
T ss_dssp             GGCCSCEEEESTTTTC
T ss_pred             cCCcCCeEEeCCCeeC
Confidence            9999999999999863

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.6e-54  Score=367.97  Aligned_cols=258  Identities=29%  Similarity=0.375  Sum_probs=223.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC----CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++..    ..++.++.||++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999988888777632    24688999999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++|+||++|||||........+.+.+.++|++.+++|+.+++.++|+++|.|++++.|+|+++||.++..+.++...|++
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~a  160 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC  160 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehh
Confidence            99999999999998655335666788999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+.+|++++|.|++++|||||+|+||+++|++.......+...+.. ..+... .....|++|+.+|+|||++++||
T Consensus       161 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~-~~~~~~-~~~~iPlgR~g~pediA~~v~fL  238 (274)
T d1xhla_         161 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKL-YSFIGS-RKECIPVGHCGKPEEIANIIVFL  238 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHH-HHHHHH-CTTTCTTSSCBCHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHH-HHHHHH-HHcCCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999987765433222211 111111 12234569999999999999999


Q ss_pred             cCC-CCCceeecEEEeCCCcccccC
Q 023553          251 ASD-EARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       251 ~s~-~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      +|+ .+.|+||++|.+|||++++.|
T Consensus       239 ~S~d~s~~itG~~i~vDGG~~l~~g  263 (274)
T d1xhla_         239 ADRNLSSYIIGQSIVADGGSTLVMG  263 (274)
T ss_dssp             HCHHHHTTCCSCEEEESTTGGGCCG
T ss_pred             cCCccccCccCcEEEeCcCHHHhcC
Confidence            996 588999999999999988755

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-54  Score=359.11  Aligned_cols=241  Identities=28%  Similarity=0.378  Sum_probs=214.4

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |.+.|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.   .+..+.+|++|++++++++    ++
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~---~~~~~~~Dv~d~~~v~~~~----~~   73 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP---GIEPVCVDLGDWEATERAL----GS   73 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHH----TT
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC---CCeEEEEeCCCHHHHHHHH----HH
Confidence            4567999999999999999999999999999999999999999988887765   4678899999999987665    46


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcc-cCCCceEEEEccccccccCCCCccchh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +|+||+||||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|. +.+.|+||+++|.++..+.++...|++
T Consensus        74 ~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~a  151 (244)
T d1pr9a_          74 VGPVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCS  151 (244)
T ss_dssp             CCCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             hCCceEEEeccccccc--cchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhh
Confidence            7999999999999765  8899999999999999999999999999999764 456799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|++++|.|++++|||||+|+||+++|++......+....        ...... .+++|+.+|+|+|++++||
T Consensus       152 sKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~--------~~~~~~-~pl~R~~~peevA~~v~fL  222 (244)
T d1pr9a_         152 TKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKA--------KTMLNR-IPLGKFAEVEHVVNAILFL  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHH--------HHHHTT-CTTCSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHH--------HHHHhc-CCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999987765543221        111222 3459999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcc
Q 023553          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +|+.++|+||++|.+|||++
T Consensus       223 ~S~~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         223 LSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             HSGGGTTCCSCEEEESTTGG
T ss_pred             hCchhCCcCCcEEEECccHh
Confidence            99999999999999999986

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5.2e-54  Score=365.88  Aligned_cols=259  Identities=26%  Similarity=0.364  Sum_probs=218.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++...    .++.++.||++++++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999988888777432    4688999999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           91 KFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      ++|+||++|||||+..+.  .....+.+.++|++++++|+.+++.++++++|.|++++.+.|+++||.++..+.++...|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y  161 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY  161 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence            999999999999987651  123346788899999999999999999999999987654555555556788899999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ++||+|+.+|+++||.||+++|||||+|+||+++|++.......+...+.. ....... ....+++|+.+|+|+|++++
T Consensus       162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~-~~~~~~~-~~~~PlgR~g~pediA~~v~  239 (272)
T d1xkqa_         162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKF-YNFMASH-KECIPIGAAGKPEHIANIIL  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHH-HHHHHHC-TTTCTTSSCBCHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHH-HHHHHHH-hcCCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999987765443322221 1111111 23345599999999999999


Q ss_pred             HhcCCC-CCceeecEEEeCCCcccccCc
Q 023553          249 FLASDE-ARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       249 ~l~s~~-~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      ||+|++ +.|+||++|.+|||+++..++
T Consensus       240 fL~S~~as~~iTG~~i~vDGG~~l~~g~  267 (272)
T d1xkqa_         240 FLADRNLSFYILGQSIVADGGTSLVMGT  267 (272)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGGCBGG
T ss_pred             HHhCcchhCCccCeEEEeCcCHHHhcCC
Confidence            999965 579999999999999987554

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.5e-54  Score=358.54  Aligned_cols=240  Identities=28%  Similarity=0.380  Sum_probs=212.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +||+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.   .+.++.||+++++++++++    +++|
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~---~~~~~~~Dv~~~~~v~~~~----~~~g   73 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP---GIEPVCVDLGDWDATEKAL----GGIG   73 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHH----TTCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC---CCeEEEEeCCCHHHHHHHH----HHcC
Confidence            47999999999999999999999999999999999999998888877764   4678899999999976655    4679


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +||+||||||+...  .++.+.+.++|++.+++|+.++++++|.++|.|.++ ..|+||+++|..+..+.++...|+++|
T Consensus        74 ~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  151 (242)
T d1cyda_          74 PVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK  151 (242)
T ss_dssp             CCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCeEEEECCccccc--hhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchH
Confidence            99999999998765  889999999999999999999999999999986544 568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +|+.+|+++||.|++++|||||+|+||+++|++.......++.        ....... .+++|+.+|+|+|++++||+|
T Consensus       152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~--------~~~~~~~-~pl~R~~~peeva~~v~fL~S  222 (242)
T d1cyda_         152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEF--------ARKLKER-HPLRKFAEVEDVVNSILFLLS  222 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHH--------HHHHHHH-STTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHH--------HHHHHhc-CCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999998765543221        1122223 345999999999999999999


Q ss_pred             CCCCceeecEEEeCCCccc
Q 023553          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++.|+||++|.+|||++.
T Consensus       223 ~~s~~itG~~i~vDGG~~a  241 (242)
T d1cyda_         223 DRSASTSGGGILVDAGYLA  241 (242)
T ss_dssp             GGGTTCCSSEEEESTTGGG
T ss_pred             chhcCcCCceEEeCcchhc
Confidence            9999999999999999864

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-53  Score=366.67  Aligned_cols=254  Identities=27%  Similarity=0.375  Sum_probs=224.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC------CCCCeEEEecCCCCHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG------GEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.      ...++.++.||++++++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999988887776652      2357889999999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .+++|++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++|+ ++..+.++...|
T Consensus        89 ~~~~G~iDiLVnnAg~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y  165 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHS  165 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHH
T ss_pred             HHHhCCeEEEEeecccccc--CchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccc
Confidence            9999999999999998765  8899999999999999999999999999999999988899998866 556678889999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      +++|+|+.+|++++|.|++++|||||+|+||+++|++..+........      ..+...+. .+++|+.+|+|||++++
T Consensus       166 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~------~~~~~~~~-~plgR~g~pedvA~~v~  238 (297)
T d1yxma1         166 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQS------FFEGSFQK-IPAKRIGVPEEVSSVVC  238 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGG------GGTTGGGG-STTSSCBCTHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHH------HHHHHHhc-CCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999987655432111      11111222 34599999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCcccccCcccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTSVNHSLRV  278 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~  278 (280)
                      ||+|+.+.|+||++|.+|||+++..+++++
T Consensus       239 fL~Sd~s~~iTG~~i~VDGG~sl~~~~~~~  268 (297)
T d1yxma1         239 FLLSPAASFITGQSVDVDGGRSLYTHSYEV  268 (297)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGCBTTCCC
T ss_pred             HHhCchhcCcCCcEEEeCcChhhhcCCCCC
Confidence            999999999999999999999998887664

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=5.6e-54  Score=364.25  Aligned_cols=255  Identities=30%  Similarity=0.408  Sum_probs=203.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC----CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..    ..++.++.||++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999988888777632    24688999999999999999999999


Q ss_pred             HhCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccc-cccccCCCCcc
Q 023553           91 KFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV-AGAIGGLGPHA  167 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~-~~~~~~~~~~~  167 (280)
                      ++|++|++|||||+..+  ....+.+.+.++|++++++|+.+++.++++++|.|++++ |.+|+++|. ++..+.++...
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~  160 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPY  160 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchh
Confidence            99999999999998643  114566789999999999999999999999999997654 566666665 46788899999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |++||+|+++|+++||.|++++|||||+|+||+++|++.......+........ ......+ ..|++|+.+|+|+|+++
T Consensus       161 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~-~~Pl~R~g~pedvA~~v  238 (264)
T d1spxa_         161 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYS-TMATMKE-CVPAGVMGQPQDIAEVI  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HH-HHHHHHH-HCTTSSCBCHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHH-HHHHHHh-cCCCCCCcCHHHHHHHH
Confidence            999999999999999999999999999999999999998765433322222111 1222223 34459999999999999


Q ss_pred             HHhcCC-CCCceeecEEEeCCCcccc
Q 023553          248 LFLASD-EARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       248 ~~l~s~-~~~~~~G~~i~~dgG~~~~  272 (280)
                      +||+|. .+.|+||++|.+|||++++
T Consensus       239 ~fL~S~~~s~~itG~~i~vDGG~slv  264 (264)
T d1spxa_         239 AFLADRKTSSYIIGHQLVVDGGSSLI  264 (264)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHhCCcccCCccCceEEeCCChhhC
Confidence            999995 4889999999999999864

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.4e-53  Score=361.07  Aligned_cols=249  Identities=28%  Similarity=0.407  Sum_probs=216.8

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHH
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      |.++++|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..  ..++.++.||+++++++++++++
T Consensus         1 p~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   80 (260)
T d1h5qa_           1 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ   80 (260)
T ss_dssp             CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999999888777666532  35788899999999999999999


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEccccccc------
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAI------  160 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~------  160 (280)
                      +.+++|++|++|||||+...  .++.+.+.++|++++++|+.+++++++.++|+|.++ ..+.|++++|.....      
T Consensus        81 ~~~~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~  158 (260)
T d1h5qa_          81 IDADLGPISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL  158 (260)
T ss_dssp             HHHHSCSEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET
T ss_pred             HHHHhCCCcEeccccccccc--CCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc
Confidence            99999999999999999765  889999999999999999999999999999998644 567777777766543      


Q ss_pred             -cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCC
Q 023553          161 -GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT  239 (280)
Q Consensus       161 -~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (280)
                       +.++...|+++|+|+.+|++++|.|++++|||||+|+||+++|++.....++          ..+..... .+++|+.+
T Consensus       159 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~----------~~~~~~~~-~pl~R~g~  227 (260)
T d1h5qa_         159 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK----------IRDHQASN-IPLNRFAQ  227 (260)
T ss_dssp             TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH----------HHHHHHHT-CTTSSCBC
T ss_pred             ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHH----------HHHHHHhc-CCCCCCcC
Confidence             3356789999999999999999999999999999999999999998665321          12222233 34599999


Q ss_pred             HHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          240 ANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       240 ~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+|+|++++||+|+++.|+||++|.+|||+..
T Consensus       228 pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         228 PEEMTGQAILLLSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             GGGGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHHHHHHHHHHhcchhCCCcCceEEECCCeec
Confidence            99999999999999999999999999999864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.2e-53  Score=359.68  Aligned_cols=246  Identities=18%  Similarity=0.218  Sum_probs=215.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      |+|||||++|||+++|+.|+++|++|++++|+.+.++++.....     .+..||++++++++++++++.+++|+||+||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~-----~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLV   76 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE-----TYPQLKPMSEQEPAELIEAVTSAYGQVDVLV   76 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH-----HCTTSEECCCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC-----cEEEeccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            79999999999999999999999999999999888776654332     1346899999999999999999999999999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHH
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN  179 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  179 (280)
                      ||||+.... .++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||.++..+.++..+|++||+|+.+|+
T Consensus        77 nNAg~~~~~-~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt  155 (252)
T d1zmta1          77 SNDIFAPEF-QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLA  155 (252)
T ss_dssp             EECCCCCCC-CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHH
T ss_pred             ECCcCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHH
Confidence            999986432 7899999999999999999999999999999999988999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCcee
Q 023553          180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYIS  259 (280)
Q Consensus       180 ~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~  259 (280)
                      |+||.|++++|||||+|+||+++|++.....+.+.....  +...+...+.. +++|+.+|+|||++++||+|+++.|+|
T Consensus       156 ~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~--~e~~~~~~~~~-pl~R~g~pedvA~~v~fL~S~~s~~iT  232 (252)
T d1zmta1         156 NALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN--PEHVAHVKKVT-ALQRLGTQKELGELVAFLASGSCDYLT  232 (252)
T ss_dssp             HHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC--HHHHHHHHHHS-SSSSCBCHHHHHHHHHHHHTTSCGGGT
T ss_pred             HHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCC--HHHHHHHHhcC-CCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence            999999999999999999999999998776654332221  11223333334 449999999999999999999999999


Q ss_pred             ecEEEeCCCcccccC
Q 023553          260 GTNLMVDGGFTSVNH  274 (280)
Q Consensus       260 G~~i~~dgG~~~~~~  274 (280)
                      |++|.+|||+++...
T Consensus       233 G~~i~vdGG~~~~~~  247 (252)
T d1zmta1         233 GQVFWLAGGFPMIER  247 (252)
T ss_dssp             TCEEEESTTCCCCCC
T ss_pred             CCeEEECCCceeCCC
Confidence            999999999987653

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.6e-53  Score=355.61  Aligned_cols=252  Identities=21%  Similarity=0.238  Sum_probs=211.8

Q ss_pred             ccccccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHH
Q 023553           11 PAVQRLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +|..+|+||++|||||++  |||+++|++|+++|++|++++|+++..++..+.........++++|++++++++++++.+
T Consensus         1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHH
Confidence            467899999999999986  999999999999999999999997766555444444456778999999999999999999


Q ss_pred             HHHhCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           89 VEKFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                      .+++|+||++|||||+...  ...++.+.+.++|++.+++|+.+++.+++.++|.|++  .|+||++||..+..+.++..
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~  158 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYN  158 (256)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCH
T ss_pred             HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCch
Confidence            9999999999999998642  1146778999999999999999999999999999864  58999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+|+++|++++|.||+++|||||+|+||+++|++.......+.        ..+...+.. +++|+.+|+|+|++
T Consensus       159 ~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~--------~~~~~~~~~-pl~R~~~pedvA~~  229 (256)
T d1ulua_         159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTK--------MYDRVAQTA-PLRRNITQEEVGNL  229 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHH--------HHHHHHHHS-TTSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHH--------HHHHHHhcC-CCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999998765543221        112222333 44999999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCccccc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ++||+|+++.|+||++|.+|||++.++
T Consensus       230 v~fL~S~~s~~itG~~i~VDGG~~~~G  256 (256)
T d1ulua_         230 GLFLLSPLASGITGEVVYVDAGYHIMG  256 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHHHhCchhCCccCCeEEECcCEeCcC
Confidence            999999999999999999999999875

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.3e-52  Score=357.77  Aligned_cols=253  Identities=30%  Similarity=0.395  Sum_probs=212.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      |+|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.  .++..+.+|++++++++++++++.+++|
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG--DNVLGIVGDVRSLEDQKQAASRCVARFG   78 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CCeeEEecccccHHHHHHHHHHHHHHhC
Confidence            45899999999999999999999999999999999999999888877764  4688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCC---CCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           94 TLDIMVNNAGISGAPC---PDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        94 ~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++|++|||||+.....   ....+.+.++|++++++|+.++++++|+++|.|+++ +|++|+++|..+..+.++...|++
T Consensus        79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~g~iI~i~S~~~~~~~~~~~~Y~a  157 (276)
T d1bdba_          79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTA  157 (276)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSTTSSCHHHHH
T ss_pred             CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-CCCceeeeechhccCCCCCchHHH
Confidence            9999999999865421   122445556799999999999999999999999765 489999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+.+|+++||.|++++ ||||+|+||+++|++...............+...+..... .+++|+.+|+|+|++++||
T Consensus       158 sKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~PlgR~g~peeva~~v~fL  235 (276)
T d1bdba_         158 AKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSV-LPIGRMPEVEEYTGAYVFF  235 (276)
T ss_dssp             HHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTT-CTTSSCCCGGGGSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhc-CCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999975 9999999999999987554332211111112233333333 4459999999999999999


Q ss_pred             cCC-CCCceeecEEEeCCCccc
Q 023553          251 ASD-EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~-~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+ .+.|+||+.|.+|||++.
T Consensus       236 ~S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         236 ATRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             HCHHHHTTCSSCEEEESSSGGG
T ss_pred             cCCcccCCeeCcEEEECcChhh
Confidence            985 688999999999999875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=5.1e-52  Score=347.32  Aligned_cols=240  Identities=30%  Similarity=0.485  Sum_probs=207.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.  .++.+++||++++++++++++++.+++|+
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~i~~~~~~i~~~~g~   79 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEALEEFGR   79 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4899999999999999999999999999999999999998888877765  57888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||....  .++.+.+.++|++++++|+.+++.++|.++|+|.+  .+.++++|| .+..+.++...|+++|+|
T Consensus        80 iDiLinnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss-~a~~~~~~~~~Y~~sK~a  154 (241)
T d2a4ka1          80 LHGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGS-VAGLGAFGLAHYAAGKLG  154 (241)
T ss_dssp             CCEEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECC-CTTCCHHHHHHHHHCSSH
T ss_pred             ccEeccccccccc--cchhhhhcccccccccccccccccccccccccccc--ccceeeccc-cccccccCccccchhhHH
Confidence            9999999998765  88999999999999999999999999999999854  345555555 455566788999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +++|+++||+|++++|||||+|+||+++|++.....++.         ...+ .+. .+++++.+|+|||++++||+|+.
T Consensus       155 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~---------~~~~-~~~-~p~~r~~~p~dva~~v~fL~S~~  223 (241)
T d2a4ka1         155 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWA---------WEQE-VGA-SPLGRAGRPEEVAQAALFLLSEE  223 (241)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHH---------HHHH-HHT-STTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhH---------HHHH-HhC-CCCCCCcCHHHHHHHHHHHhcch
Confidence            999999999999999999999999999999876543211         1222 222 44599999999999999999999


Q ss_pred             CCceeecEEEeCCCcccc
Q 023553          255 ARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~  272 (280)
                      ++|+||++|.+|||++.+
T Consensus       224 s~~itG~~i~vDGG~s~~  241 (241)
T d2a4ka1         224 SAYITGQALYVDGGRSIV  241 (241)
T ss_dssp             GTTCCSCEEEESTTTTTC
T ss_pred             hCCCcCceEEeCCCcccC
Confidence            999999999999999763

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.3e-51  Score=343.52  Aligned_cols=231  Identities=26%  Similarity=0.385  Sum_probs=204.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      |+||++|||||++|||+++|+.|+++|++|++++|+++.+++.        ...++.||+++.      ++.+.++++++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~--------~~~~~~~Dv~~~------~~~~~~~~g~i   67 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS--------GHRYVVCDLRKD------LDLLFEKVKEV   67 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT--------CSEEEECCTTTC------HHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc--------CCcEEEcchHHH------HHHHHHHhCCC
Confidence            7899999999999999999999999999999999998765542        234678999864      45667788999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||+++|..+..+.++...|+++|+|+
T Consensus        68 D~lVnnAG~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal  145 (234)
T d1o5ia_          68 DILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMAL  145 (234)
T ss_dssp             SEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             cEEEecccccCC--cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHH
Confidence            999999998765  889999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023553          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  255 (280)
                      .+|+|++|.|++++|||||+|+||+++|++.....+++.         .+.... ..+++|+.+|+|+|++++||+|+++
T Consensus       146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~---------~~~~~~-~~pl~R~~~pediA~~v~fL~S~~s  215 (234)
T d1o5ia_         146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEK---------KKQVES-QIPMRRMAKPEEIASVVAFLCSEKA  215 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHH---------HHHHHT-TSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHH---------HHHHHh-cCCCCCCcCHHHHHHHHHHHhChhh
Confidence            999999999999999999999999999999876554321         111222 3445999999999999999999999


Q ss_pred             CceeecEEEeCCCcccc
Q 023553          256 RYISGTNLMVDGGFTSV  272 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~~  272 (280)
                      +|+||++|.+|||++..
T Consensus       216 ~~itG~~i~vDGG~s~~  232 (234)
T d1o5ia_         216 SYLTGQTIVVDGGLSKF  232 (234)
T ss_dssp             TTCCSCEEEESTTCCCC
T ss_pred             cCCcCcEEEECcccccC
Confidence            99999999999998753

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1e-50  Score=345.61  Aligned_cols=256  Identities=25%  Similarity=0.381  Sum_probs=215.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ...+|+||++|||||++|||+++|+.|+++|++|++++|+. +.+++..+++.. ..++.++.||+++++++.++++++.
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            45569999999999999999999999999999999998874 455666665543 3578899999999999999999999


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-cCCCCccc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GGLGPHAY  168 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-~~~~~~~Y  168 (280)
                      +.+|++|++|||+|....  .++.+.+.++|++++++|+.+++.++++++|+|++  .|++++++|..+.. +.+....|
T Consensus        92 ~~~g~idilV~nag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~~Y  167 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAVY  167 (272)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCHHH
T ss_pred             HHhCCCCccccccccchh--hhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchhhH
Confidence            999999999999998766  88999999999999999999999999999999964  57888898887655 45667889


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhh--hhhhHHHHhhhccCCCCCCCHHHHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA--MVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      +++|+|+++|++++|.||+++|||||+|+||+++|++.+............  .+...........+.+|+++|+|||++
T Consensus       168 ~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~  247 (272)
T d1g0oa_         168 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV  247 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999976543322111000  011122222334455999999999999


Q ss_pred             HHHhcCCCCCceeecEEEeCCCccc
Q 023553          247 VLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       247 i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++||+|+.+.|+||++|.+|||.++
T Consensus       248 v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         248 VCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHhCchhcCccCceEeECCCCCC
Confidence            9999999999999999999999864

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.1e-50  Score=338.78  Aligned_cols=228  Identities=24%  Similarity=0.268  Sum_probs=208.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCe-------EEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAK-------VCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~-------Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++|||||++|||+++|+.|+++|++       |++++|+.+.+++..+++... .++.++.||++++++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999998       899999999999888887543 5788899999999999999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++|++|+||||||+...  .++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.++..+.++...|++
T Consensus        82 ~~g~iDilvnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  159 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCM  159 (240)
T ss_dssp             HTSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCcceeecccccccC--CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHH
Confidence            99999999999999866  8899999999999999999999999999999999888999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+.+|+++|+.|++++|||||+|+||+++|+++........                    .++.+|+|+|+++++|
T Consensus       160 sK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~~--------------------~~~~~PedvA~~v~~l  219 (240)
T d2bd0a1         160 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQ--------------------ALMMMPEDIAAPVVQA  219 (240)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTG--------------------GGSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhhH--------------------hcCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999766432210                    3567999999999999


Q ss_pred             cCCCCCceeec-EEEeCCC
Q 023553          251 ASDEARYISGT-NLMVDGG  268 (280)
Q Consensus       251 ~s~~~~~~~G~-~i~~dgG  268 (280)
                      ++++.++++|+ ++..+||
T Consensus       220 ~s~~~~~~~~~~~i~p~~G  238 (240)
T d2bd0a1         220 YLQPSRTVVEEIILRPTSG  238 (240)
T ss_dssp             HTSCTTEEEEEEEEEETTC
T ss_pred             HcCCccCccCCEEEEecCC
Confidence            99888888877 5667776

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.8e-51  Score=345.88  Aligned_cols=251  Identities=27%  Similarity=0.362  Sum_probs=212.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .|.||+||||||++|||+++|+.|+++|++|++++++ .+.+++..+++.. ..++.++.||++++++++++++++.+++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999999987655 4556666666643 3578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc-cCCCCccchhh
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GGLGPHAYTGS  171 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~-~~~~~~~Y~~s  171 (280)
                      |+||++|||||....  .++.+.+.++|++.+++|+.+++.++++++|+|++  ++++++++|..+.. +.++...|+++
T Consensus        83 g~idilinnag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~~iii~s~~~~~~~~~~~~~Y~as  158 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSIAAVMTGIPNHALYAGS  158 (259)
T ss_dssp             SCEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCGGGTCCSCCSCHHHHHH
T ss_pred             CCCcEEEeccccccc--cccccchHHHHHHHHhhccceeeeehhhhhhhhhc--CCcccccccccccccCCCCchhHHHH
Confidence            999999999998765  88999999999999999999999999999999965  46787787766655 67899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh---hhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER---TEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      |+|+.+|+|+||+|++++|||||+|+||+++|++.++.......   .....+...+...... +++|+++|+|||++++
T Consensus       159 K~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pl~R~g~p~eVa~~v~  237 (259)
T d1ja9a_         159 KAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN-PLKRIGYPADIGRAVS  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS-TTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCC-CCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999997654322111   0011122333333344 4499999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCcc
Q 023553          249 FLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ||+|+.++++||++|.+|||..
T Consensus       238 fL~S~~a~~itG~~i~vDGG~~  259 (259)
T d1ja9a_         238 ALCQEESEWINGQVIKLTGGGI  259 (259)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHhCchhcCCcCceEEeCCCCC
Confidence            9999999999999999999973

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-51  Score=342.50  Aligned_cols=241  Identities=29%  Similarity=0.448  Sum_probs=208.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++..   ..++.+++||++++++++++++++.+++|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            699999999999999999999999999999999999998888887754   25788899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC---CceEEEEccccccccCCCCccchh
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++|+||||||+...          ++|++++++|+.+++.+++.++|+|.+++   .|+||++||.++..+.++..+|++
T Consensus        82 ~iDilVnnAg~~~~----------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  151 (254)
T d2gdza1          82 RLDILVNNAGVNNE----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  151 (254)
T ss_dssp             CCCEEEECCCCCCS----------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CcCeeccccccccc----------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHH
Confidence            99999999998643          45899999999999999999999997754   478999999999999999999999


Q ss_pred             hHHHHHHHHHH--HHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH
Q 023553          171 SKHAVLGLNKN--VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       171 sK~al~~~~~~--la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  248 (280)
                      ||+|+.+|+|+  |+.|++++|||||+|+||+++|+|.............  ....+......++ +++.+|+|+|++++
T Consensus       152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~--~~~~~~~~~~~p~-~r~~~pedvA~~v~  228 (254)
T d2gdza1         152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQY--IEYKDHIKDMIKY-YGILDPPLIANGLI  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGG--GGGHHHHHHHHHH-HCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhcccccccccc--HHHHHHHHhcCCC-CCCcCHHHHHHHHH
Confidence            99999999996  7899999999999999999999998766543322111  1122222233333 88999999999999


Q ss_pred             HhcCCCCCceeecEEEeCCCcccc
Q 023553          249 FLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       249 ~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ||+|++  ++||++|.+|||....
T Consensus       229 fL~s~~--~itG~~i~VdGG~~~~  250 (254)
T d2gdza1         229 TLIEDD--ALNGAIMKITTSKGIH  250 (254)
T ss_dssp             HHHHCT--TCSSCEEEEETTTEEE
T ss_pred             HHHcCC--CCCCCEEEECCCCeee
Confidence            999864  5999999999998654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-49  Score=334.36  Aligned_cols=246  Identities=27%  Similarity=0.367  Sum_probs=211.1

Q ss_pred             cccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHH
Q 023553           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      +|-|.+|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++.   ..++.+++||++++++++++++
T Consensus         2 ~~~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~   81 (257)
T d1xg5a_           2 RPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFS   81 (257)
T ss_dssp             CTTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHH
Confidence            4545669999999999999999999999999999999999999988888777643   3578889999999999999999


Q ss_pred             HHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC--CceEEEEcccccccc--C
Q 023553           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIG--G  162 (280)
Q Consensus        87 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~isS~~~~~~--~  162 (280)
                      ++.+++|+||+||||||....  .++.+.+.++|++.+++|+.++++++++++|.|++.+  .|+||+++|.++...  .
T Consensus        82 ~~~~~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~  159 (257)
T d1xg5a_          82 AIRSQHSGVDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL  159 (257)
T ss_dssp             HHHHHHCCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC
T ss_pred             HHHHhcCCCCEEEecccccCC--CccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC
Confidence            999999999999999998766  8899999999999999999999999999999987654  699999999998754  4


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHH--CCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCH
Q 023553          163 LGPHAYTGSKHAVLGLNKNVAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~--~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      ++...|+++|+|+.+|+++|+.|+  +++||+||+|+||+++|++.........          +.... ..+.+++++|
T Consensus       160 ~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~----------~~~~~-~~~~~r~~~p  228 (257)
T d1xg5a_         160 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP----------EKAAA-TYEQMKCLKP  228 (257)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH----------HHHHH-HHC---CBCH
T ss_pred             cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhH----------HHHHh-cCCCCCCcCH
Confidence            456779999999999999999998  7899999999999999999766543221          11111 2234899999


Q ss_pred             HHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          241 NDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       241 ~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      +|||++++||+|+++.++|||++-.++|
T Consensus       229 edvA~~v~fL~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         229 EDVAEAVIYVLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             HHHHHHHHHHhCChhcCeECCEEEEeCC
Confidence            9999999999999999999997544444

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-50  Score=336.50  Aligned_cols=242  Identities=31%  Similarity=0.481  Sum_probs=206.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++++++..+    ...+....+|+.+.+.+.    ...+.+++
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----~~~~~~~~~d~~~~~~~~----~~~~~~~~   74 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----YPGIQTRVLDVTKKKQID----QFANEVER   74 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----STTEEEEECCTTCHHHHH----HHHHHCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----ccCCceeeeecccccccc----cccccccc
Confidence            4899999999999999999999999999999999999887665543    234667888998876654    45556789


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccchhhHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYTGSKH  173 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~-~~~~~~~~Y~~sK~  173 (280)
                      +|++|||||....  .++.+.+.++|++.+++|+.+++.+++++.|.|.+++.|+||+++|..+. .+.++...|+++|+
T Consensus        75 id~lVn~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKa  152 (245)
T d2ag5a1          75 LDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKA  152 (245)
T ss_dssp             CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred             ceeEEecccccCC--CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHH
Confidence            9999999999866  88999999999999999999999999999999999889999999998875 56788899999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023553          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      |+++|+|+||.|++++|||||+|+||+++|++..+........+    ......... .+++|+.+|+|+|+++.||+++
T Consensus       153 al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~----~~~~~~~~~-~pl~R~~~pedva~~v~fL~s~  227 (245)
T d2ag5a1         153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPE----EARNDFLKR-QKTGRFATAEEIAMLCVYLASD  227 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHH----HHHHHHHHT-CTTSSCEEHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhH----HHHHHHHhc-CCCCCCcCHHHHHHHHHHHhCh
Confidence            99999999999999999999999999999999775433211111    112222223 4459999999999999999999


Q ss_pred             CCCceeecEEEeCCCccc
Q 023553          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ++.++||+.|.+|||+++
T Consensus       228 ~s~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         228 ESAYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             GGTTCCSCEEEECTTGGG
T ss_pred             hhCCCcCceEEeCCCcCC
Confidence            999999999999999974

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.6e-50  Score=348.36  Aligned_cols=233  Identities=26%  Similarity=0.385  Sum_probs=204.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc---------chHHHHHHHhCCCCCeEEEecCCCCHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD---------NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   84 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++++.         +.+++..+++..  ......+|+++.++++++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR--RGGKAVANYDSVEAGEKL   80 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH--TTCEEEEECCCGGGHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh--cccccccccchHHHHHHH
Confidence            568999999999999999999999999999999997653         344555555543  234567899999999999


Q ss_pred             HHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC
Q 023553           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        85 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~  164 (280)
                      ++++.+++|+||+||||||+...  .++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.++..+.++
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~  158 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG  158 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHcCCCCEEEECCccCCC--CChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC
Confidence            99999999999999999999876  8999999999999999999999999999999999988999999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ...|++||+|+.+|+++|+.|++++|||||+|+||++.|++.... +++         .           .+..+|+|||
T Consensus       159 ~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~-~~~---------~-----------~~~~~PedvA  217 (302)
T d1gz6a_         159 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM-PED---------L-----------VEALKPEYVA  217 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS-CHH---------H-----------HHHSCGGGTH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC-cHh---------h-----------HhcCCHHHHH
Confidence            999999999999999999999999999999999999988764432 211         0           2345899999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          245 NAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++++||+|+.+ ++||++|.+|||+...
T Consensus       218 ~~v~fL~S~~a-~itG~~i~vdGG~~~~  244 (302)
T d1gz6a_         218 PLVLWLCHESC-EENGGLFEVGAGWIGK  244 (302)
T ss_dssp             HHHHHHTSTTC-CCCSCEEEEETTEEEE
T ss_pred             HHHHHHcCCCc-CCCCcEEEeCCCceeE
Confidence            99999999765 7899999999997643

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=3.9e-48  Score=333.27  Aligned_cols=249  Identities=26%  Similarity=0.363  Sum_probs=213.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++..  ...+.++.||++++++++++++.+.+.
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            579999999999999999999999999999999999999888877766532  357788999999999999999999999


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhccc-CCCceEEEEccccccccCCCCccchh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|++|||||....  ..+.+.+.++|++.+.+|+.+.+.+.+...+.+.. ...+.++.++|..+..+.++..+|++
T Consensus       101 ~g~iDilvnnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysa  178 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  178 (294)
T ss_dssp             TCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             ccccchhhhhhhhccc--cccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHH
Confidence            9999999999998766  78899999999999999999999998888777654 45678899999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|+|+++|+|.+|.|++++|||||+|+||+++|++..........       ......+. .+.+|+++|+|+|++++||
T Consensus       179 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~-------~~~~~~~~-~pl~R~~~pediA~~v~fL  250 (294)
T d1w6ua_         179 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT-------FEKEMIGR-IPCGRLGTVEELANLAAFL  250 (294)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH-------HHHHHHTT-CTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHH-------HHHHHhhc-CCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999998765543211       11111222 3459999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccc
Q 023553          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|+.+.|+||++|.+|||++.+
T Consensus       251 ~sd~s~~itG~~i~vDGG~~l~  272 (294)
T d1w6ua_         251 CSDYASWINGAVIKFDGGEEVL  272 (294)
T ss_dssp             TSGGGTTCCSCEEEESTTHHHH
T ss_pred             hCchhcCCCCcEEEECCChhhe
Confidence            9999999999999999997643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.9e-46  Score=317.07  Aligned_cols=243  Identities=18%  Similarity=0.210  Sum_probs=205.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHH---cCCeEEEEecCcchHHHHHHHhC---CCCCeEEEecCCCCHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHK---HGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~---~g~~Vi~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      ..|+||++|||||++|||+++|+.|++   +|++|++++|+.+.++++.+++.   ...++.++.||++++++++++++.
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            358999999999999999999999997   79999999999999988877763   235788999999999999999999


Q ss_pred             HHHH----hCCccEEEECCCCCCC-CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC--CceEEEEccccccc
Q 023553           88 TVEK----FGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAI  160 (280)
Q Consensus        88 ~~~~----~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~isS~~~~~  160 (280)
                      +.+.    ++.+|++|||||...+ +..++.+.+.++|++++++|+.++++++|.++|+|++++  .|+||++||.++..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            8763    3579999999998654 225688999999999999999999999999999998765  58999999999999


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCH
Q 023553          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      +.+++..|++||+|+++|+++|+.|  .+|||||+|+||+++|+|...........     .....+....+ .+++.+|
T Consensus       162 ~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~-----~~~~~~~~~~~-~~r~~~p  233 (259)
T d1oaaa_         162 PYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDP-----ELRSKLQKLKS-DGALVDC  233 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCH-----HHHHHHHHHHH-TTCSBCH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCH-----HHHHHHHhcCC-CCCCCCH
Confidence            9999999999999999999999999  57999999999999999876432211110     01111122222 3899999


Q ss_pred             HHHHHHHHHhcCCCCCceeecEEEe
Q 023553          241 NDVANAVLFLASDEARYISGTNLMV  265 (280)
Q Consensus       241 ~dva~~i~~l~s~~~~~~~G~~i~~  265 (280)
                      +|+|+++++|+++ ..|+||+.|++
T Consensus       234 ~evA~~i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         234 GTSAQKLLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHHHHH-CCSCTTEEEET
T ss_pred             HHHHHHHHHHhhh-ccCCCCCeEEe
Confidence            9999999999985 56999999975

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-47  Score=316.27  Aligned_cols=219  Identities=27%  Similarity=0.408  Sum_probs=197.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.. ..++..+.||++|++++.++++++.+++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999999999999888887753 3578999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      |++|++|||||+...  ..+.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.++..+.+++..|++||
T Consensus        83 g~idilinnag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  160 (244)
T d1yb1a_          83 GDVSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK  160 (244)
T ss_dssp             CCCSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             CCCceeEeecccccc--ccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHH
Confidence            999999999999876  788899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCC---CCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          173 HAVLGLNKNVAAELGK---YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       173 ~al~~~~~~la~e~~~---~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      +|+.+|+++|+.|+++   +||+|++|+||+++|++.+.....                     .+++.+|+++|+.++.
T Consensus       161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~~---------------------~~~~~~pe~va~~i~~  219 (244)
T d1yb1a_         161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTS---------------------LGPTLEPEEVVNRLMH  219 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHHH---------------------HCCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCcc---------------------ccCCCCHHHHHHHHHH
Confidence            9999999999999865   589999999999999987542110                     1567799999999988


Q ss_pred             hcCCCC
Q 023553          250 LASDEA  255 (280)
Q Consensus       250 l~s~~~  255 (280)
                      .+..+.
T Consensus       220 ~~~~~~  225 (244)
T d1yb1a_         220 GILTEQ  225 (244)
T ss_dssp             HHHTTC
T ss_pred             HHhcCC
Confidence            775443

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=2e-46  Score=315.48  Aligned_cols=235  Identities=19%  Similarity=0.201  Sum_probs=197.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH--hCCCCCeEEEecCCC-CHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS--LGGEPDTFFCHCDVT-KEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~--~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~   90 (280)
                      ++|+||+||||||++|||+++|++|+++|++|++++|+.+..+...+.  ......+.++.+|++ +.++++++++.+.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999887766554432  234457888999998 67889999999999


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC---CceEEEEccccccccCCCCcc
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~isS~~~~~~~~~~~~  167 (280)
                      ++|+||+||||||...          .++|++++++|+.+++++++.++|.|.+++   .|+||+++|..+..+.+++.+
T Consensus        81 ~~g~iDilvnnAG~~~----------~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~  150 (254)
T d1sbya1          81 QLKTVDILINGAGILD----------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV  150 (254)
T ss_dssp             HHSCCCEEEECCCCCC----------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred             HcCCCCEEEeCCCCCC----------HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHH
Confidence            9999999999999643          367999999999999999999999997653   589999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      |++||+|+.+|+++|+.|++++|||||+|+||+++|++.+..........    .+..     .++..+..+||++|+++
T Consensus       151 Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~e~va~~~  221 (254)
T d1sbya1         151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEP----RVAE-----LLLSHPTQTSEQCGQNF  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCT----THHH-----HHTTSCCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHH----HHHh-----ccccCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999998765433221110    0111     11224567899999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCcc
Q 023553          248 LFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++++.   +.||+++.+|||++
T Consensus       222 ~~~~~~---~~tG~vi~vdgG~l  241 (254)
T d1sbya1         222 VKAIEA---NKNGAIWKLDLGTL  241 (254)
T ss_dssp             HHHHHH---CCTTCEEEEETTEE
T ss_pred             HHhhhC---CCCCCEEEECCCEe
Confidence            988854   35999999999964

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-45  Score=309.99  Aligned_cols=237  Identities=31%  Similarity=0.473  Sum_probs=203.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  .......+|+.+.+.+......+...++.
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG--NNCVFAPADVTSEKDVQTALALAKGKFGR   79 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CCccccccccccccccccccccccccccc
Confidence            5899999999999999999999999999999999999999998888876  46678899999999999999999999999


Q ss_pred             ccEEEECCCCCCCC----CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC------CCceEEEEccccccccCCC
Q 023553           95 LDIMVNNAGISGAP----CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        95 id~li~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~g~iv~isS~~~~~~~~~  164 (280)
                      +|.+++++++....    ..++.+.+.++|++++++|+.+++++++++.|.|..+      +.|+||++||..+..+.++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~  159 (248)
T d2o23a1          80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG  159 (248)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT
T ss_pred             ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCC
Confidence            99999998875431    1456778899999999999999999999999997543      5689999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ...|++||+|+++|+++|+.|++++|||||+|+||+++|++......+          ..+......++.+|+++|+|||
T Consensus       160 ~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~----------~~~~~~~~~pl~~R~g~peevA  229 (248)
T d2o23a1         160 QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK----------VCNFLASQVPFPSRLGDPAEYA  229 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------------CHHHHTCSSSCSCBCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHH----------HHHHHHhcCCCCCCCcCHHHHH
Confidence            999999999999999999999999999999999999999997654322          1222233445559999999999


Q ss_pred             HHHHHhcCCCCCceeecEEEe
Q 023553          245 NAVLFLASDEARYISGTNLMV  265 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~  265 (280)
                      ++++||++  ++|+||++|++
T Consensus       230 ~~v~fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         230 HLVQAIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHHHHHHH--CTTCCSCEEEE
T ss_pred             HHHHHHHh--CCCCCceEeEC
Confidence            99999996  57999999975

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.1e-45  Score=309.36  Aligned_cols=248  Identities=20%  Similarity=0.243  Sum_probs=212.2

Q ss_pred             cCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      |+||++|||||++  |||+++|+.|+++|++|++++|+++..+...+............+|+++..++...++++.+.++
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            7899999999998  89999999999999999999999776665555444445677888999999999999999999999


Q ss_pred             CccEEEECCCCCCCCC---CCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           94 TLDIMVNNAGISGAPC---PDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        94 ~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++|++||||+......   ........+.|...+++|+.+.+.+.+.+.+.|.+  ++.|+++||..+..+.+....|++
T Consensus        83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~~~~~~Y~~  160 (258)
T d1qsga_          83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGL  160 (258)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHH
T ss_pred             ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCCCCcHHHHH
Confidence            9999999999865411   22345677889999999999999999999999843  578999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      ||+|+++|++++|.||+++|||||+|+||+++|++.......+..        .+..... .+++|+++|||+|+++.||
T Consensus       161 sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~--------~~~~~~~-~pl~R~~~peeia~~v~fL  231 (258)
T d1qsga_         161 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKM--------LAHCEAV-TPIRRTVTIEDVGNSAAFL  231 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHH--------HHHHHHH-STTSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhH--------HHHHHhC-CCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999987664332211        1112223 3459999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccccC
Q 023553          251 ASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      +|+.+.++||+++.+|||++.+++
T Consensus       232 ~s~~s~~itG~~i~vDGG~~i~g~  255 (258)
T d1qsga_         232 CSDLSAGISGEVVHVDGGFSIAAM  255 (258)
T ss_dssp             TSGGGTTCCSCEEEESTTGGGBCS
T ss_pred             hCchhcCccCceEEECcCHHHhcC
Confidence            999999999999999999998876

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.9e-45  Score=317.86  Aligned_cols=254  Identities=18%  Similarity=0.222  Sum_probs=201.4

Q ss_pred             CCcEEEEEc--CCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-------------CCeEEE----------
Q 023553           17 VGRVALITG--GATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-------------PDTFFC----------   71 (280)
Q Consensus        17 ~~k~vlItG--as~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-------------~~~~~~----------   71 (280)
                      .+|++||||  +++|||++||+.|+++|++|++++++..............             ......          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            379999999  5689999999999999999999998876544333222110             111122          


Q ss_pred             ----------ecCCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHh
Q 023553           72 ----------HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI  141 (280)
Q Consensus        72 ----------~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  141 (280)
                                .+|++++++++++++.+.+.+|+||++|||||......+++.+.+.++|++.+++|+++.+.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                      2366788889999999999999999999999987543367889999999999999999999999999999


Q ss_pred             cccCCCceEEEEccccccccCCC-CccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCceeccccccCCC--------
Q 023553          142 MIPQTKGTIISICSVAGAIGGLG-PHAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLP--------  211 (280)
Q Consensus       142 l~~~~~g~iv~isS~~~~~~~~~-~~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~t~~~~~~~~--------  211 (280)
                      |.+  .|+||++||..+..+.|+ ...|+++|+|+++|++.||.||++ +|||||+|+||+++|+.......        
T Consensus       161 m~~--~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~  238 (329)
T d1uh5a_         161 MKP--QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN  238 (329)
T ss_dssp             EEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC---------
T ss_pred             ccc--ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhh
Confidence            954  589999999999998887 567999999999999999999986 69999999999999964332110        


Q ss_pred             ---------------------------cchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEE
Q 023553          212 ---------------------------EEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLM  264 (280)
Q Consensus       212 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~  264 (280)
                                                 .........+.......+..| ++|+++|+|||++++||+|+.+.|+||++|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-l~R~~~pedvA~~v~fLaSd~s~~iTGq~i~  317 (329)
T d1uh5a_         239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAP-LRQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHSS-SCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCC-CCCCcCHHHHHHHHHHHhCchhCCccCCeEE
Confidence                                       001111111223333333444 4999999999999999999999999999999


Q ss_pred             eCCCccccc
Q 023553          265 VDGGFTSVN  273 (280)
Q Consensus       265 ~dgG~~~~~  273 (280)
                      +|||++.++
T Consensus       318 VDGG~~~~g  326 (329)
T d1uh5a_         318 VDNGLNIMF  326 (329)
T ss_dssp             ESTTGGGCS
T ss_pred             ECCCccccc
Confidence            999998765

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.8e-44  Score=310.55  Aligned_cols=255  Identities=24%  Similarity=0.233  Sum_probs=202.9

Q ss_pred             cccccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC------------CCC-eEEEecC--
Q 023553           12 AVQRLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG------------EPD-TFFCHCD--   74 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~------------~~~-~~~~~~D--   74 (280)
                      |.++|+||++|||||++  |||+++|+.|+++|++|++++|+.............            ... .....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            55789999999999875  999999999999999999999986543332222110            011 1122232  


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHH
Q 023553           75 ------------------VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK  136 (280)
Q Consensus        75 ------------------~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  136 (280)
                                        .++..+++++++++.+++|+||++|||||.......++.+.+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              24555678899999999999999999999865434778999999999999999999999999


Q ss_pred             HHHHhcccCCCceEEEEccccccc-cCCCCccchhhHHHHHHHHHHHHHHHC-CCCeEEEEEeCCceeccccccCCCcch
Q 023553          137 HAARIMIPQTKGTIISICSVAGAI-GGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRVNCVSPYAVATGLALAHLPEEE  214 (280)
Q Consensus       137 ~~~~~l~~~~~g~iv~isS~~~~~-~~~~~~~Y~~sK~al~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~  214 (280)
                      +++|.|.+  ++.++.+++..... ..+....|+++|+++.++++.++.+++ ++|||||+|+||+++|++.......+ 
T Consensus       162 ~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~-  238 (297)
T d1d7oa_         162 HFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID-  238 (297)
T ss_dssp             HHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHH-
T ss_pred             HHHHHhhc--CCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCH-
Confidence            99999865  35666666655543 446778999999999999999999996 57999999999999999876543221 


Q ss_pred             hhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccccCccc
Q 023553          215 RTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                             ...+...... +++|+.+|+|||++++||+|+.+.|+||++|.+|||++.++.+++
T Consensus       239 -------~~~~~~~~~~-PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~~~~  293 (297)
T d1d7oa_         239 -------TMIEYSYNNA-PIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVALD  293 (297)
T ss_dssp             -------HHHHHHHHHS-SSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSCTT
T ss_pred             -------HHHHHHHhCC-CCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcCCCCC
Confidence                   1222233334 459999999999999999999999999999999999999998875

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=5.9e-44  Score=305.37  Aligned_cols=241  Identities=27%  Similarity=0.317  Sum_probs=190.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC--CCC-----------------eEEEecCCCCH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG--EPD-----------------TFFCHCDVTKE   78 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~--~~~-----------------~~~~~~D~~~~   78 (280)
                      .++|||||++|||+++|+.|+++|++|++++++. +..+++.+++..  ...                 .....+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            5899999999999999999999999999987764 444444444421  122                 33456779999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHH--------------HHhhhhhhhHHHHHHHHHHhc--
Q 023553           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFE--------------KVFDINVKGVFHGMKHAARIM--  142 (280)
Q Consensus        79 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~l--  142 (280)
                      ++++++++++.+++|+||+||||||+..+  .++.+.+.++|+              .++.+|+.+++.+.+.+.+.+  
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCC--CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            99999999999999999999999999766  666666655554              578999999999999988764  


Q ss_pred             ----ccCCCceEEEEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhh
Q 023553          143 ----IPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED  218 (280)
Q Consensus       143 ----~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~  218 (280)
                          .+...++|++++|.....+.++..+|++||+|+.+|++++|.||+++|||||+|+||++.+...  . +.+     
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~--~-~~~-----  232 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD--M-PPA-----  232 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG--S-CHH-----
T ss_pred             hHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc--C-CHH-----
Confidence                3345689999999999999999999999999999999999999999999999999998654321  1 111     


Q ss_pred             hhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccccc
Q 023553          219 AMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                          ..+......++.+|+.+|+|+|++++||+|+++.|+||++|.+|||+++++
T Consensus       233 ----~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~r  283 (284)
T d1e7wa_         233 ----VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  283 (284)
T ss_dssp             ----HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             ----HHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhccC
Confidence                122223344555999999999999999999999999999999999998764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-45  Score=311.36  Aligned_cols=241  Identities=22%  Similarity=0.247  Sum_probs=190.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEE---ecCcch---HHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIA---DVQDNL---GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~---~r~~~~---~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .|+||||||++|||+++|+.|+++|++|+.+   .|+.+.   +.+..+.+.. ..++..+.||+++++++.++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            5899999999999999999999999986554   444433   3344445443 46899999999999999999988743


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                        |++|++|||||....  .++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||.++..+.++...|++
T Consensus        82 --g~idilvnnag~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~a  157 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (285)
T ss_dssp             --SCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             --cchhhhhhccccccc--ccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHH
Confidence              799999999999866  8899999999999999999999999999999999988999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhh-----hhhhhHHHHh-hhccCCCCCCCHHHHH
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-----AMVGFRNFVA-RNANMQGTELTANDVA  244 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~dva  244 (280)
                      ||+|+.+|+++|+.|++++||+||+|+||+++|++........+...+     ....+..... ....+.++..+|||||
T Consensus       158 sKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA  237 (285)
T d1jtva_         158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHH
Confidence            999999999999999999999999999999999998776543221111     0011111111 1111225678999999


Q ss_pred             HHHHHhcCCC---CCceeecE
Q 023553          245 NAVLFLASDE---ARYISGTN  262 (280)
Q Consensus       245 ~~i~~l~s~~---~~~~~G~~  262 (280)
                      ++++++++.+   .+|++|+.
T Consensus       238 ~~v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         238 EVFLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             HHHHHHHHCSSCCSEEESCST
T ss_pred             HHHHHHHhCCCCCeEEecHHH
Confidence            9999999654   35677753

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.1e-43  Score=293.10  Aligned_cols=231  Identities=29%  Similarity=0.391  Sum_probs=195.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +|++|||||++|||+++|+.|+++|++|++++|+++.           .+...+.+|+++......+.....+.. ..+.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~   68 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-----------EDLIYVEGDVTREEDVRRAVARAQEEA-PLFA   68 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------SSSEEEECCTTCHHHHHHHHHHHHHHS-CEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------ccceEeeccccchhhhHHHHHhhhccc-cccc
Confidence            5999999999999999999999999999999998763           345678899999999999888887664 5556


Q ss_pred             EEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHh------cccCCCceEEEEccccccccCCCCccch
Q 023553           98 MVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARI------MIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        98 li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------l~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +++++++...  ........+.+.|++++++|+.+.+.+++.+.+.      |++++.|+||++||..+..+.++..+|+
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~  148 (241)
T d1uaya_          69 VVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYA  148 (241)
T ss_dssp             EEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHH
T ss_pred             hhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhH
Confidence            6666665432  1144556788999999999999999999999998      5556779999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023553          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  249 (280)
                      ++|+|+.+|+++||.|++++|||||+|+||+++|++........         ...+ ....++.+|+++|+|+|++++|
T Consensus       149 asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~---------~~~~-~~~~~~~~R~g~pedvA~~v~f  218 (241)
T d1uaya_         149 ASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKA---------KASL-AAQVPFPPRLGRPEEYAALVLH  218 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHH---------HHHH-HTTCCSSCSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhH---------HHHH-HhcCCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999987654321         1122 2334455999999999999999


Q ss_pred             hcCCCCCceeecEEEeCCCcccc
Q 023553          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+|  +.|+||++|.+|||+++.
T Consensus       219 L~s--~~~iTG~~i~VDGG~~m~  239 (241)
T d1uaya_         219 ILE--NPMLNGEVVRLDGALRMA  239 (241)
T ss_dssp             HHH--CTTCCSCEEEESTTCCCC
T ss_pred             HHh--CCCCCCCEEEECCcccCC
Confidence            997  469999999999998753

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=3.5e-43  Score=295.02  Aligned_cols=225  Identities=19%  Similarity=0.182  Sum_probs=187.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHH---HcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH--Hh
Q 023553           18 GRVALITGGATGIGESTVRLFH---KHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE--KF   92 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~---~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~   92 (280)
                      .|+||||||++|||+++|+.|+   ++|++|++++|++++++++.+......++.++.||++|+++++++++++.+  ++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            5899999999999999999997   479999999999998887765555456899999999999999999999864  56


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-----------CCceEEEEcccccccc
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-----------TKGTIISICSVAGAIG  161 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~g~iv~isS~~~~~~  161 (280)
                      +++|+||||||+.... ..+.+.+.++|++++++|+.+++.++++++|+|+++           +.|++|+++|..+...
T Consensus        82 ~~iDiLvnNAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          82 QGLNVLFNNAGIAPKS-ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GCCSEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             CCcceEEeeccccccC-cccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence            8999999999987553 568899999999999999999999999999999753           4689999999988653


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCC
Q 023553          162 ---GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL  238 (280)
Q Consensus       162 ---~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (280)
                         .+++..|++||+|+.+|+++++.|++++||+|++|+||+++|+|.....+....                      .
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~~~~~----------------------~  218 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVP----------------------T  218 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSBCHH----------------------H
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCCCCch----------------------H
Confidence               456679999999999999999999999999999999999999997655432100                      0


Q ss_pred             CHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          239 TANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       239 ~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      .++++++.+.++.    ...+|++|.+||+.
T Consensus       219 ~~~~i~~~i~~l~----~~~tG~~i~~dG~~  245 (248)
T d1snya_         219 STGQIVQTISKLG----EKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHHHHHHCC----GGGTTCEECTTSCB
T ss_pred             HHHHHHHHHHhcC----ccCCCcEEEECCeE
Confidence            1234444444443    34589999999975

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=2.3e-42  Score=294.08  Aligned_cols=249  Identities=19%  Similarity=0.236  Sum_probs=198.0

Q ss_pred             ccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+++..+...+.........+..+|+++++++.++++++.+.+
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            37899999999765  9999999999999999999999965443333222223456678999999999999999999999


Q ss_pred             CCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           93 GTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        93 g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      |++|++|||+|.....  .........+.+...+.++..+.....+.+.+.+  +..+.|+++++.+...+.+....|++
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~y~a  159 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVMGL  159 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTCHHHHH
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeecccccccccccchhhhH
Confidence            9999999999986541  1334455566666777777777766666666654  23456777777777777788899999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l  250 (280)
                      +|+|+.+|+++++.|++++|||||+|+||+++|++.......+.        ....... ..+.+++++|+|||++++||
T Consensus       160 sK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~--------~~~~~~~-~~p~~r~~~pedIA~~v~fL  230 (274)
T d2pd4a1         160 AKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRM--------ILKWNEI-NAPLRKNVSLEEVGNAGMYL  230 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHH--------HHHHHHH-HSTTSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHH--------HHHHHhh-hhhccCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998766544321        1222222 34459999999999999999


Q ss_pred             cCCCCCceeecEEEeCCCcccccC
Q 023553          251 ASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      +|+.+.++||++|.+|||++.+++
T Consensus       231 ~S~~s~~itG~~i~vDGG~~~~g~  254 (274)
T d2pd4a1         231 LSSLSSGVSGEVHFVDAGYHVMGM  254 (274)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGBSS
T ss_pred             hChhhCCCcCceEEECCChhhccC
Confidence            999999999999999999987654

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.3e-43  Score=291.75  Aligned_cols=229  Identities=17%  Similarity=0.151  Sum_probs=196.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC--C
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG--T   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~   94 (280)
                      +||++|||||++|||+++|+.|+++|++|++++++....         ......+.+|.++.+++..+.+.+.+.++  +
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE---------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQK   71 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT---------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------ccccceeecccCcHHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999999999999999876532         12345667888889999888888887764  7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||..... ..+.+.+.++|+++|++|+.+++++++.++|+|++  .|+||++||.++..+.++..+|++||+|
T Consensus        72 iD~lInnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaa  148 (236)
T d1dhra_          72 VDAILCVAGGWAGG-NAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGA  148 (236)
T ss_dssp             EEEEEECCCCCCCB-CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred             ceEEEECCcccccc-cchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHH
Confidence            99999999975432 45667778999999999999999999999999954  5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHC--CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          175 VLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       175 l~~~~~~la~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      +++|+++|+.|++  ++||+||+|+||+++|++.+...+..+.                   +++.+|+++|+.+.+|++
T Consensus       149 l~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-------------------~~~~~pe~va~~~~~l~s  209 (236)
T d1dhra_         149 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADF-------------------SSWTPLEFLVETFHDWIT  209 (236)
T ss_dssp             HHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCG-------------------GGSEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccchh-------------------hcCCCHHHHHHHHHHHhC
Confidence            9999999999998  5799999999999999997765554221                   457789999999999999


Q ss_pred             CCCCceeecEEEe--CCCcccccCcc
Q 023553          253 DEARYISGTNLMV--DGGFTSVNHSL  276 (280)
Q Consensus       253 ~~~~~~~G~~i~~--dgG~~~~~~~~  276 (280)
                      ....+++|+.|.+  ++|.....|.|
T Consensus       210 ~~~~~i~G~~i~v~~~~g~t~~~p~~  235 (236)
T d1dhra_         210 GNKRPNSGSLIQVVTTDGKTELTPAY  235 (236)
T ss_dssp             TTTCCCTTCEEEEEEETTEEEEEEEC
T ss_pred             CCccCCCCCeEEEEEECCEEEEEecc
Confidence            9999999997766  66666655554

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=9.9e-42  Score=289.17  Aligned_cols=253  Identities=23%  Similarity=0.176  Sum_probs=206.6

Q ss_pred             ccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .|+||++|||||  ++|||+++|+.|+++|++|++++|+.+++.+...+.. ..+...+.||+++++++.++++.+.+.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHc-CCceeeEeeecccccccccccchhhhcc
Confidence            478999999994  5799999999999999999999999877644332221 2456678999999999999999998775


Q ss_pred             ---CCccEEEECCCCCCC---CCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023553           93 ---GTLDIMVNNAGISGA---PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        93 ---g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~  166 (280)
                         +++|++|||+|+...   ...++.+.+.++|.+.+.+|+...+...+...+.+..   +.+++++|.....+.|+..
T Consensus        82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~p~~~  158 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRAMPAYN  158 (268)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSCCTTTH
T ss_pred             ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---ccccccccccccccCcccc
Confidence               679999999997532   2246778999999999999999999999998887633   4566677777788889999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcc--hhhhhhhhhhHHHHhhhccCCCCCCCHHHHH
Q 023553          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE--ERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      .|+++|+|+.+|+++++.|++++|||||+|+||+++|++........  .......+.+.+...+..++.+++.+|+|+|
T Consensus       159 ~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva  238 (268)
T d2h7ma1         159 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVA  238 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHH
T ss_pred             hhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            99999999999999999999999999999999999999976543322  1222222334444445556645699999999


Q ss_pred             HHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          245 NAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       245 ~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++.||+|+..+|+||++|.+|||++.
T Consensus       239 ~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         239 KTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             HHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HHHHHHhCchhcCccCCEEEECcCccc
Confidence            999999999999999999999999964

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=295.62  Aligned_cols=218  Identities=24%  Similarity=0.282  Sum_probs=188.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           19 RVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +++|||||++|||+++|+.|+++ |++|++++|+.+++++..++++. ..++.++.||+++.++++++++++.+++|+||
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            45699999999999999999986 89999999999999988888753 35788999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC--------------
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--------------  162 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~--------------  162 (280)
                      +||||||+...  ..+.+.+.++|++++++|+.+++++++.++|+|++  .|+||+++|..+..+.              
T Consensus        84 iLVnNAGi~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~~~  159 (275)
T d1wmaa1          84 VLVNNAGIAFK--VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSE  159 (275)
T ss_dssp             EEEECCCCCCC--TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             EEEEcCCcCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhccc
Confidence            99999999866  77778888999999999999999999999999964  5899999998764332              


Q ss_pred             ---------------------------CCCccchhhHHHHHHHHHHHHHHHCC----CCeEEEEEeCCceeccccccCCC
Q 023553          163 ---------------------------LGPHAYTGSKHAVLGLNKNVAAELGK----YGIRVNCVSPYAVATGLALAHLP  211 (280)
Q Consensus       163 ---------------------------~~~~~Y~~sK~al~~~~~~la~e~~~----~gi~v~~v~pg~v~t~~~~~~~~  211 (280)
                                                 .+...|++||+++..|++.++++|++    .||+||+|+||+++|+|.+... 
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~-  238 (275)
T d1wmaa1         160 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA-  238 (275)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTC-
T ss_pred             ccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcc-
Confidence                                       12356999999999999999999865    5899999999999999865432 


Q ss_pred             cchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc--CCCCCceeecEEEeCC
Q 023553          212 EEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA--SDEARYISGTNLMVDG  267 (280)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~--s~~~~~~~G~~i~~dg  267 (280)
                                               ..+|+|+|+.+++++  +++...++|+++. |.
T Consensus       239 -------------------------~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~  270 (275)
T d1wmaa1         239 -------------------------TKSPEEGAETPVYLALLPPDAEGPHGQFVS-EK  270 (275)
T ss_dssp             -------------------------SBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TT
T ss_pred             -------------------------cCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CC
Confidence                                     237999999999986  4556678999886 44

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=2e-40  Score=280.59  Aligned_cols=241  Identities=27%  Similarity=0.382  Sum_probs=192.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-HHHHHHhCC--CCCeEEEecCC----CCHHHHHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGG--EPDTFFCHCDV----TKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~----~~~~~~~~~~~~~~~~   91 (280)
                      .++|||||++|||+++|+.|+++|++|++++|+.++. +++.+++..  ......+.+|+    +.++.+.++++.+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999986653 444444422  24556665544    4467788899999999


Q ss_pred             hCCccEEEECCCCCCCCCCCC-----------CCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-----CCceEEEEcc
Q 023553           92 FGTLDIMVNNAGISGAPCPDI-----------READLSEFEKVFDINVKGVFHGMKHAARIMIPQ-----TKGTIISICS  155 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~g~iv~isS  155 (280)
                      +|+||++|||||+..+  ..+           .....+.+...+..|+.+.+...+...+.+...     ..+.++.+++
T Consensus        82 ~g~iDilvnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          82 FGRCDVLVNNASAYYP--TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HSCCCEEEECCCCCCC--CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             hCCCCEEEECCccCCC--Ccccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence            9999999999998764  222           223355688889999999999999988887543     3578999999


Q ss_pred             ccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCC
Q 023553          156 VAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG  235 (280)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (280)
                      ..+..+.+++..|++||+|+++|++++|.|++++|||||+|+||+++|++....   +         ..+......++-+
T Consensus       160 ~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~---~---------~~~~~~~~~pl~r  227 (266)
T d1mxha_         160 AMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ---E---------TQEEYRRKVPLGQ  227 (266)
T ss_dssp             GGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCH---H---------HHHHHHTTCTTTS
T ss_pred             ccccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCH---H---------HHHHHHhcCCCCC
Confidence            999999999999999999999999999999999999999999999999864321   1         1111223333424


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccccc
Q 023553          236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       236 ~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ++++|||+|++++||+|+++.|+||++|.+|||+++.+
T Consensus       228 ~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         228 SEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhhhC
Confidence            45899999999999999999999999999999998764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.3e-41  Score=282.52  Aligned_cols=222  Identities=19%  Similarity=0.188  Sum_probs=182.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC--
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG--   93 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   93 (280)
                      .|+||||||++|||+++|++|+++|+  .|++++|+.++++++.+..  ..++.++.||++++++++++++++.+.++  
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK--DSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCC--CTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhh--CCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            59999999999999999999999996  5888999998887765432  35788999999999999999999999876  


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-----------CCceEEEEccccccccC
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-----------TKGTIISICSVAGAIGG  162 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~g~iv~isS~~~~~~~  162 (280)
                      ++|+||||||+..+. .++.+.+.++|++++++|+.+++++++.++|+|+++           ..++++++++..+....
T Consensus        81 ~idilinnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          81 GLSLLINNAGVLLSY-GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             CCCEEEECCCCCCCB-CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CeEEEEEcCcccCCC-CccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence            499999999987543 677889999999999999999999999999999653           24789999887665543


Q ss_pred             C-------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCC
Q 023553          163 L-------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG  235 (280)
Q Consensus       163 ~-------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (280)
                      +       +..+|++||+|+.+|+++|+.|++++||+|++|+||+++|+|....                          
T Consensus       160 ~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~--------------------------  213 (250)
T d1yo6a1         160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN--------------------------  213 (250)
T ss_dssp             CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------------------
T ss_pred             CcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC--------------------------
Confidence            2       3456999999999999999999999999999999999999986432                          


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          236 TELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       236 ~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      ...+|++.++.++..+.......+|.++..||-
T Consensus       214 ~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~  246 (250)
T d1yo6a1         214 AALTVEQSTAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             -----HHHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             CCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCe
Confidence            124789999999999987677789999988864

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-40  Score=281.70  Aligned_cols=216  Identities=18%  Similarity=0.210  Sum_probs=191.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      |+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.  .......+.+|+++.+++..+.+.+.+.++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            899999999999999999999999999999999999999988877653  235677889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      .+|+++||||....  ..+.+.+.++|++++++|+.+++.+++.++|.|+ +++|+||++||.++..+.++...|++||+
T Consensus        92 ~~~~li~nag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~-~~~G~ii~isS~~~~~~~p~~~~Y~asKa  168 (269)
T d1xu9a_          92 GLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKF  168 (269)
T ss_dssp             SCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred             Cccccccccccccc--cccccCCHHHhhhheeeehhhHHHHHHHHHHHHH-hcCCcceEeccchhcCCCCCchHHHHHHH
Confidence            99999999998766  7888999999999999999999999999999996 45699999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCC--CCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          174 AVLGLNKNVAAELGK--YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       174 al~~~~~~la~e~~~--~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+++|+++|+.|+++  .||+|++|+||+++|++.....+....                   ....+|+++|+.++...
T Consensus       169 al~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~~~-------------------~~~~~~e~~a~~i~~~~  229 (269)
T d1xu9a_         169 ALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVH-------------------MQAAPKEECALEIIKGG  229 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGGG-------------------GGCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCCcc-------------------ccCCCHHHHHHHHHHHh
Confidence            999999999999974  579999999999999997655432111                   22457899999988766


Q ss_pred             CC
Q 023553          252 SD  253 (280)
Q Consensus       252 s~  253 (280)
                      ..
T Consensus       230 ~~  231 (269)
T d1xu9a_         230 AL  231 (269)
T ss_dssp             HT
T ss_pred             hc
Confidence            44

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.8e-40  Score=275.10  Aligned_cols=217  Identities=17%  Similarity=0.155  Sum_probs=183.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH--hCCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK--FGTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~g~i   95 (280)
                      .++||||||++|||+++|++|+++|++|++++|+++...         .....+.+|..+.++.....+.+...  +++|
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc---------cccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            456799999999999999999999999999999876421         23445678888888888777777764  4889


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |+||||||+.... ..+.+.+.++|+.++++|+.+++.+++.++|+|++  +|+||++||..+..+.+++.+|++||+|+
T Consensus        73 D~linnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal  149 (235)
T d1ooea_          73 DGVFCVAGGWAGG-SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAV  149 (235)
T ss_dssp             EEEEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             eEEEECCcccccc-cccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHHH
Confidence            9999999986542 34556667889999999999999999999999964  58999999999999999999999999999


Q ss_pred             HHHHHHHHHHHC--CCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHH-HhcC
Q 023553          176 LGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL-FLAS  252 (280)
Q Consensus       176 ~~~~~~la~e~~--~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~-~l~s  252 (280)
                      ++|+++|+.|++  +.+|+||+|+||+++|++.+...++...                   .++++|+++++.++ ++.+
T Consensus       150 ~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~~~-------------------~~~~~~~~va~~~~~~l~~  210 (235)
T d1ooea_         150 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADH-------------------SSWTPLSFISEHLLKWTTE  210 (235)
T ss_dssp             HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCCG-------------------GGCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCCcc-------------------ccCCCHHHHHHHHHHHhcC
Confidence            999999999998  4789999999999999998766554211                   45779999999987 4555


Q ss_pred             CCCCceeecEEEe
Q 023553          253 DEARYISGTNLMV  265 (280)
Q Consensus       253 ~~~~~~~G~~i~~  265 (280)
                      ...++++|+.+.+
T Consensus       211 ~~~~~~tG~~i~v  223 (235)
T d1ooea_         211 TSSRPSSGALLKI  223 (235)
T ss_dssp             GGGCCCTTCEEEE
T ss_pred             ccccCCCceEEEE
Confidence            6777899999998

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.9e-38  Score=267.16  Aligned_cols=222  Identities=27%  Similarity=0.375  Sum_probs=168.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CCcc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTLD   96 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   96 (280)
                      .|+||||||++|||+++|+.|+++|++|++++|+++.                ..+|+.+.+..+....++.... +.+|
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~----------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE----------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            3899999999999999999999999999999997653                2468999999887776665544 6799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccc----------------
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI----------------  160 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~----------------  160 (280)
                      ++|||||+...         .+.+.....+|..+...+.+...+.+.+.....+.++.+.....                
T Consensus        65 ~lv~~Ag~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  135 (257)
T d1fjha_          65 GLVLCAGLGPQ---------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGE  135 (257)
T ss_dssp             EEEECCCCCTT---------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTC
T ss_pred             EEEEcCCCCCc---------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCc
Confidence            99999997533         13478888999999999999999988776666666665543321                


Q ss_pred             -----------cC-CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHh
Q 023553          161 -----------GG-LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA  228 (280)
Q Consensus       161 -----------~~-~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  228 (280)
                                 +. ++..+|++||+|+++|+|++|.||+++|||||+|+||+++|++.+.....+...        +...
T Consensus       136 ~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~--------~~~~  207 (257)
T d1fjha_         136 EAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYG--------ESIA  207 (257)
T ss_dssp             HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------------
T ss_pred             EEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHH--------HHHH
Confidence                       11 123469999999999999999999999999999999999999987665443221        1112


Q ss_pred             hhccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcccc
Q 023553          229 RNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       229 ~~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +...+++|+.+|+|||++++||+|+++.|+||++|.+|||++.+
T Consensus       208 ~~~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~tav  251 (257)
T d1fjha_         208 KFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             -CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             hcCCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccch
Confidence            23345599999999999999999999999999999999998643

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=1.1e-31  Score=225.96  Aligned_cols=224  Identities=17%  Similarity=0.163  Sum_probs=172.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc---chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQD---NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~---~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++++|||||++|||+++|++|+++|++ |++++|+.   +..++..+++.. ..++.++.||++|+++++++++.+.+.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            5679999999999999999999999994 88899874   344455555432 357899999999999999999988654


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       +++|++|||+|+...  .++.+.+.++|++++++|+.+++++.+.+.    ..+.++||++||.++..+.++...|+++
T Consensus        88 -~~i~~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~----~~~~~~iv~~SS~a~~~g~~~~~~YaAa  160 (259)
T d2fr1a1          88 -VPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELTR----ELDLTAFVLFSSFASAFGAPGLGGYAPG  160 (259)
T ss_dssp             -SCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSCCSEEEEEEEHHHHTCCTTCTTTHHH
T ss_pred             -ccccccccccccccc--cccccccHHHHHHHhhhhccchhHHHHHhh----ccCCceEeeecchhhccCCcccHHHHHH
Confidence             689999999999876  889999999999999999999998877543    3556899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      |+++++|++.++    ..|+++++|+||++.++........+.            +.+ ..  -..++|+++++++..++
T Consensus       161 ka~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~~~~~~------------~~~-~G--~~~~~~~~~~~~l~~~l  221 (259)
T d2fr1a1         161 NAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPVADR------------FRR-HG--VIEMPPETACRALQNAL  221 (259)
T ss_dssp             HHHHHHHHHHHH----HTTCCCEEEEECCBC------------------------CTT-TT--EECBCHHHHHHHHHHHH
T ss_pred             HHhHHHHHHHHH----hCCCCEEECCCCcccCCccccchHHHH------------HHh-cC--CCCCCHHHHHHHHHHHH
Confidence            999998877655    458999999999987654322111100            000 00  13468999999999988


Q ss_pred             CCCCCceeecEEEeCCC
Q 023553          252 SDEARYISGTNLMVDGG  268 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG  268 (280)
                      ....  ..+.++.+|..
T Consensus       222 ~~~~--~~~~v~~~d~~  236 (259)
T d2fr1a1         222 DRAE--VCPIVIDVRWD  236 (259)
T ss_dssp             HTTC--SSCEECEECHH
T ss_pred             hCCC--ceEEEEeCcHH
Confidence            6543  33445555543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=8.8e-21  Score=165.82  Aligned_cols=230  Identities=13%  Similarity=0.075  Sum_probs=160.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-----hHHHHHHHh-CCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-----LGQQVCQSL-GGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-----~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .|+||||||+|.||+.++++|.+.|+.|++++|...     ..+...... ....++.++.+|++|.+++.++++..   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            389999999999999999999999999999999643     222222221 12357889999999999998888765   


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc----------
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------  161 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~----------  161 (280)
                        ++|++||.|+.....      .+.++....+++|+.++.++++++...-. ++..+||++||.+..-.          
T Consensus        78 --~~d~v~h~aa~~~~~------~~~~~~~~~~~~Nv~gt~nllea~~~~~~-~~~~r~i~~SS~~vYG~~~~~~~~E~~  148 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVA------VSFESPEYTADVDAMGTLRLLEAIRFLGL-EKKTRFYQASTSELYGLVQEIPQKETT  148 (357)
T ss_dssp             --CCSEEEECCCCCTTT------TTTSCHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             --CCCEEEEeecccccc------hhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEEchhhhCCCCCCCcCCCC
Confidence              899999999986542      33455677899999999999999876421 33468999998654211          


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc--------c
Q 023553          162 -GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA--------N  232 (280)
Q Consensus       162 -~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~  232 (280)
                       ..+..+|+.||.+.+.+++.+++.+   ++.+..+.|+.+..|............    ..+........        .
T Consensus       149 ~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~----~~~~~~~~~~~~~~~~g~~~  221 (357)
T d1db3a_         149 PFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKIT----RAIANIAQGLESCLYLGNMD  221 (357)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHH----HHHHHHHTTSCCCEEESCTT
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHH----HHHHHHHhCCCceEEECCCC
Confidence             1235689999999999999998875   688999999999998643322211110    01111111111        1


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 ~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ..+.++.++|++++++.++...    .|+.+++.+|-.
T Consensus       222 ~~r~~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~  255 (357)
T d1db3a_         222 SLRDWGHAKDYVKMQWMMLQQE----QPEDFVIATGVQ  255 (357)
T ss_dssp             CEECCEEHHHHHHHHHHTTSSS----SCCCEEECCCCC
T ss_pred             eeecceeechHHHHHHHHHhCC----CCCeEEECCCCc
Confidence            1236899999999999988643    467777776654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.83  E-value=2.5e-22  Score=160.59  Aligned_cols=155  Identities=13%  Similarity=0.129  Sum_probs=114.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ...+|+||+++||||++|||+++|+.|+++|++|++++|+.+++++..+.+.....+....+|+++.+++.+++      
T Consensus        17 ~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------   90 (191)
T d1luaa1          17 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV------   90 (191)
T ss_dssp             TTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT------
T ss_pred             cCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh------
Confidence            34689999999999999999999999999999999999999998888777754445556789999998876544      


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-CCCCccchh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-GLGPHAYTG  170 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-~~~~~~Y~~  170 (280)
                       +++|+||||||+.      +...+.++|++.+++|+.+.++....+.+.+.... .....+++.....+ ..+...|++
T Consensus        91 -~~iDilin~Ag~g------~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~g~~~y~~  162 (191)
T d1luaa1          91 -KGAHFVFTAGAIG------LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALGIGGLKLKL  162 (191)
T ss_dssp             -TTCSEEEECCCTT------CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHHHHHHHHHH
T ss_pred             -cCcCeeeecCccc------cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccCcCcHHHHH
Confidence             5899999999964      23578899999999999888765544433332221 12222222222111 123357999


Q ss_pred             hHHHHHHHHH
Q 023553          171 SKHAVLGLNK  180 (280)
Q Consensus       171 sK~al~~~~~  180 (280)
                      +|+++..+++
T Consensus       163 sk~a~~~l~~  172 (191)
T d1luaa1         163 HRACIAKLFE  172 (191)
T ss_dssp             HHHHHHHHTS
T ss_pred             HHHHHHHHHh
Confidence            9999988764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.80  E-value=1.8e-19  Score=157.61  Aligned_cols=227  Identities=15%  Similarity=0.108  Sum_probs=158.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEE-EecCcch-HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNL-GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~-~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +||||||+|.||+.++++|++.|+.|++ +++.... .....+.+....++.++.+|++|.+.+..+++..     ++|+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCCE
Confidence            5899999999999999999999998544 5543211 1111222333457889999999999988777643     8999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-----CCceEEEEcccccccc-----------
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-----TKGTIISICSVAGAIG-----------  161 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~g~iv~isS~~~~~~-----------  161 (280)
                      |||+|+....      ..+.++..+.+++|+.+..++++.+...-...     +..++|++||.+....           
T Consensus        77 VihlAa~~~~------~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (361)
T d1kewa_          77 VMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             EEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             EEECccccch------hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccccc
Confidence            9999986432      13344557789999999999999988764321     2358999999775421           


Q ss_pred             ----------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc
Q 023553          162 ----------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA  231 (280)
Q Consensus       162 ----------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (280)
                                ..+...|+.||.+.+.+++.++..+   |+.+..+.|+.+..|...........       .........
T Consensus       151 ~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~-------i~~~~~g~~  220 (361)
T d1kewa_         151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLV-------ILNALEGKP  220 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHH-------HHHHHHTCC
T ss_pred             CCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHH-------HHHHHcCCC
Confidence                      1123569999999999999998875   68999999999998864321110111       111111111


Q ss_pred             c-------CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          232 N-------MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 ~-------~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .       ..+.++..+|+|+++..++....   .|+.+++.+|-.
T Consensus       221 ~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~  263 (361)
T d1kewa_         221 LPIYGKGDQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNE  263 (361)
T ss_dssp             EEEETTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCE
T ss_pred             cEEeCCCCeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCC
Confidence            1       11347899999999999986432   467888877643

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=6.2e-18  Score=149.15  Aligned_cols=175  Identities=15%  Similarity=0.040  Sum_probs=129.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc----------------chHHHHHHHhC--CCCCeEEEecCCCCHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD----------------NLGQQVCQSLG--GEPDTFFCHCDVTKEE   79 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~----------------~~~~~~~~~~~--~~~~~~~~~~D~~~~~   79 (280)
                      ||+||||||+|.||.+++++|++.|++|++++.-.                ....+......  ...++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            78999999999999999999999999999986210                01111111110  1246889999999999


Q ss_pred             HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc
Q 023553           80 DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA  159 (280)
Q Consensus        80 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~  159 (280)
                      .+.++++..     ++|+|||.|+....   .....+.+.....+.+|+.+..++++++...   ...-++++.||....
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~---~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~~i~~ss~~~~  149 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSA---PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTMGEY  149 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCH---HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCGGGG
T ss_pred             HHHHHHHhh-----cchheecccccccc---ccccccccccccccccccccccHHHHHHHHh---ccccceeeccccccc
Confidence            998888754     89999999987532   2334566778889999999999999988765   223466666665442


Q ss_pred             cc------------------------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceecccc
Q 023553          160 IG------------------------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA  206 (280)
Q Consensus       160 ~~------------------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~  206 (280)
                      ..                        ..+...|+.||.+.+.+++.+++++   ++.+..+.|+.+..+..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~~  217 (393)
T d1i24a_         150 GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  217 (393)
T ss_dssp             CCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             cccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCCc
Confidence            11                        1223479999999999999888774   78999999999988753

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=8.7e-18  Score=145.35  Aligned_cols=232  Identities=16%  Similarity=0.141  Sum_probs=159.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc----hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDN----LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ++|||||+|.||+.+++.|++.|++|++++|...    ..... +... ..++.++++|++|.+.+.++++..     ++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~-~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI-ERLG-GKHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHH-HHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHH-Hhhc-CCCCEEEEeecCCHHHHHHHHhcc-----CC
Confidence            5999999999999999999999999999976322    12222 1121 246888999999999987777743     79


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC------------C
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG------------L  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~------------~  163 (280)
                      |++||.|+....      ..+.++..+.+++|+.++.++++++...-    -.++|++||.+...+.            .
T Consensus        75 d~ViHlAa~~~~------~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~----v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~  144 (338)
T d1udca_          75 DTVIHFAGLKAV------GESVQKPLEYYDNNVNGTLRLISAMRAAN----VKNFIFSSSATVYGDQPKIPYVESFPTGT  144 (338)
T ss_dssp             SEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHT----CCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred             CEEEECCCccch------hhHHhCHHHHHHhHHHHHHHHHHHHHHhC----CCEEEecCcceEEccccccccccccccCC
Confidence            999999986432      13344567899999999999999887752    3589999987765322            1


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh--hhhhhhhhHHHHhhh-----------
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVARN-----------  230 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----------  230 (280)
                      +...|+.+|.+.+.+.+....++  .++.+..+.|+.+.++...........  ....+..+.......           
T Consensus       145 p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~  222 (338)
T d1udca_         145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCS
T ss_pred             CcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCc
Confidence            35689999999999999887774  468888999999988765433221110  000001111101000           


Q ss_pred             ----ccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          231 ----ANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       231 ----~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                          ....+.++..+|++.++..+.........++++++.++..
T Consensus       223 ~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~  266 (338)
T d1udca_         223 PTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVG  266 (338)
T ss_dssp             SSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSC
T ss_pred             ccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCC
Confidence                0011346788999988777665434445788899988764

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.76  E-value=1.7e-17  Score=143.73  Aligned_cols=226  Identities=13%  Similarity=0.040  Sum_probs=152.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh---CCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +||+||||||+|.||..+++.|.++|++|+++.|+..+...+....   ........+..|+++.+++.+++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            5999999999999999999999999999999999876655443322   222344557789999987665544       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC----------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----------  163 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~----------  163 (280)
                      .+|+++|+++....      ..+   ....+..|+.+..++++.+...   .+-.++|++||..+.....          
T Consensus        83 ~~~~v~~~a~~~~~------~~~---~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~e  150 (342)
T d1y1pa1          83 GAAGVAHIASVVSF------SNK---YDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLDE  150 (342)
T ss_dssp             TCSEEEECCCCCSC------CSC---HHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEECT
T ss_pred             cchhhhhhcccccc------ccc---ccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCccccc
Confidence            78999999986532      122   3456778999999988887663   3346899999976532111          


Q ss_pred             ---------------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhh
Q 023553          164 ---------------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG  222 (280)
Q Consensus       164 ---------------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~  222 (280)
                                           ....|+.+|.+.+.+++.+++++. .++++..++|+.+..+............    ..
T Consensus       151 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~----~~  225 (342)
T d1y1pa1         151 KSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTS----GW  225 (342)
T ss_dssp             TCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHH----HH
T ss_pred             cccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchH----HH
Confidence                                 123699999999999999988875 3688889999998877533222111100    00


Q ss_pred             hHHHHhh------hccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          223 FRNFVAR------NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       223 ~~~~~~~------~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      ...+...      .......++.++|+|++++..+..  ....|+.+...++
T Consensus       226 ~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~--~~~~g~~~~~~~~  275 (342)
T d1y1pa1         226 MMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAG  275 (342)
T ss_dssp             HHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred             HHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcC--ccccceEEEEcCC
Confidence            1111111      011114478899999998777643  2345655544444

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.5e-17  Score=142.62  Aligned_cols=218  Identities=11%  Similarity=0.034  Sum_probs=149.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-----HHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-----GQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |++|||||+|.||+.++++|.++|+.|++++|....     ++.+......  ..++.++.+|++|.+.+.++++..   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            445999999999999999999999999999986431     2211111111  246889999999999998888765   


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc----------
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------  161 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~----------  161 (280)
                        .++++++.++....      ..+.+.....+++|+.+..++++++...-. .+..++|++||.+....          
T Consensus        79 --~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~~  149 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETT  149 (347)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             --ccceeeeeeecccc------chhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCCC
Confidence              88899999876432      234455677789999999999988877532 23358999998664311          


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh-------hccC
Q 023553          162 -GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-------NANM  233 (280)
Q Consensus       162 -~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  233 (280)
                       ..+...|+.||.+.+.+++.+++.+   ++.+..+.|+.+..|..............   -.......       ....
T Consensus       150 ~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~---i~~~~~~~~~~~~~g~g~~  223 (347)
T d1t2aa_         150 PFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRS---VAKIYLGQLECFSLGNLDA  223 (347)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHH---HHHHHHTSCSCEEESCTTC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCcccccccee---eehhhcCCcceeecCCCcc
Confidence             1134679999999999999988774   68888999999988753332221111000   00000001       0111


Q ss_pred             CCCCCCHHHHHHHHHHhcCCC
Q 023553          234 QGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       234 ~~~~~~~~dva~~i~~l~s~~  254 (280)
                      .+.++.++|+++++..++...
T Consensus       224 ~r~~i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         224 KRDWGHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             EECCEEHHHHHHHHHHHHHSS
T ss_pred             eeeeeEecHHHHHHHHHhhcC
Confidence            246889999999999988653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=2.4e-17  Score=141.15  Aligned_cols=225  Identities=16%  Similarity=0.086  Sum_probs=154.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      |+||||||+|.||+.++++|.++|++|++++|..... ....+.+....++.++.+|++|.+++.+.+...     ..++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cccc
Confidence            7899999999999999999999999999999875421 222334444467889999999999988777754     7888


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC------------CCC
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG------------LGP  165 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~------------~~~  165 (280)
                      ++++|+....      ....++....++.|+.+..++++++...-   ...++++.||.. ..+.            .+.
T Consensus        76 ~~~~a~~~~~------~~~~~~~~~~~~~n~~g~~~~l~~~~~~~---~~~~~i~~Ss~~-~~~~~~~~~~~E~~~~~p~  145 (321)
T d1rpna_          76 VYNLAAQSFV------GASWNQPVTTGVVDGLGVTHLLEAIRQFS---PETRFYQASTSE-MFGLIQAERQDENTPFYPR  145 (321)
T ss_dssp             EEECCSCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHHC---TTSEEEEEEEGG-GGCSCSSSSBCTTSCCCCC
T ss_pred             cccccccccc------cccccchHHHHhhhhhchHHHHHHHHHhC---CCcccccccchh-hcCcccCCCCCCCCCcccc
Confidence            8888876432      12223457889999999999999887742   224566666543 3321            235


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc--------CCCCC
Q 023553          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN--------MQGTE  237 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~  237 (280)
                      ..|+.+|.+.+.+++.++.++   ++.+..+.|+.+..|...........    ...+.........        ..+.+
T Consensus       146 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i----~~~~~~~~~~~~~~i~~g~g~~~r~~  218 (321)
T d1rpna_         146 SPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKV----TDAVARIKLGKQQELRLGNVDAKRDW  218 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHH----HHHHHHHHTTSCSCEEESCTTCEEEC
T ss_pred             ChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHH----HHHHHHHHhCCCCcEEECCCCeEEcc
Confidence            789999999999999998884   68889999998888764332211100    0011111111111        11347


Q ss_pred             CCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          238 LTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       238 ~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      +..+|+|+++..++....    +..+++.+|-
T Consensus       219 i~v~D~~~~~~~~~~~~~----~~~~ni~~~~  246 (321)
T d1rpna_         219 GFAGDYVEAMWLMLQQDK----ADDYVVATGV  246 (321)
T ss_dssp             EEHHHHHHHHHHHHHSSS----CCCEEECCSC
T ss_pred             EEeHHHHHHHHHHHhcCC----cCCceecccc
Confidence            899999999999986432    3445565553

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.74  E-value=6.5e-17  Score=140.31  Aligned_cols=216  Identities=14%  Similarity=0.057  Sum_probs=153.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ++||+||||||+|.||+.+++.|.++|+.|++++|+........+.......+.++.+|++|++.+.++++..     .+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~   80 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   80 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-----hh
Confidence            6899999999999999999999999999999999987765555554444457889999999999987777654     89


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc------------CC
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------------GL  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~------------~~  163 (280)
                      |+++|.|+....      ..+.+.....+.+|+.+..++++++...   .....+++.|+......            ..
T Consensus        81 ~~v~~~aa~~~~------~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  151 (356)
T d1rkxa_          81 EIVFHMAAQPLV------RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMG  151 (356)
T ss_dssp             SEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             hhhhhhhccccc------cccccCCccccccccccchhhhhhhhcc---ccccccccccccccccccccccccccccccC
Confidence            999999986532      2345567889999999999999988774   22345555554433221            11


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCC------CCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh-------h
Q 023553          164 GPHAYTGSKHAVLGLNKNVAAELGK------YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-------N  230 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~------~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  230 (280)
                      +...|+.+|.+.+.+.+.++.++..      +++.+..+.|+.+..+.....   ....    ..+......       .
T Consensus       152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~---~~~i----~~~~~~~~~~~~~~~~~  224 (356)
T d1rkxa_         152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL---DRIV----PDILRAFEQSQPVIIRN  224 (356)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS---SCHH----HHHHHHHHTTCCEECSC
T ss_pred             CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchh---hHHH----HHHHHHHhCCCceEEee
Confidence            3457999999999999999887643      368899999998887653211   1110    001111111       1


Q ss_pred             ccCCCCCCCHHHHHHHHHHhcC
Q 023553          231 ANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       231 ~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ......++..+|++.++..++.
T Consensus       225 ~~~~~~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         225 PHAIRPWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             TTCEECCEETHHHHHHHHHHHH
T ss_pred             ccccccccccccccchhhhhhh
Confidence            1112456778999999877764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.73  E-value=6.5e-17  Score=139.83  Aligned_cols=230  Identities=13%  Similarity=0.028  Sum_probs=159.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc----hHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN----LGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~----~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+-|++|||||+|.||+.++++|.+.|+.|++++|...    ...........  ...+.++.+|+.|........    
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~----   89 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC----   89 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH----
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc----
Confidence            35689999999999999999999999999999986322    22222111111  146888999999988654332    


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-------
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-------  162 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-------  162 (280)
                         ...+.+++.+.....      ..+.++....+++|+.+..++++++...    +-.++|++||.+.....       
T Consensus        90 ---~~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~E  156 (341)
T d1sb8a_          90 ---AGVDYVLHQAALGSV------PRSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPGLPKVE  156 (341)
T ss_dssp             ---TTCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSBCT
T ss_pred             ---ccccccccccccccc------cccccCccchhheeehhHHHHHHHHHhc----CCceEEEcccceeeCCCCCCCccC
Confidence               388889988875432      2345677889999999999999988763    34589999998764322       


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc-------
Q 023553          163 ----LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------  231 (280)
Q Consensus       163 ----~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  231 (280)
                          .+...|+.+|.+.+.+++.+++..   ++++..+.|+.+.++.............   ........+..       
T Consensus       157 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~---~~~~~~~~g~~i~~~g~g  230 (341)
T d1sb8a_         157 DTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIP---KWTSSMIQGDDVYINGDG  230 (341)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHH---HHHHHHHHTCCCEEESSS
T ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHH---HHHHHHHcCCceEEcCCC
Confidence                234789999999999999998875   6889999999998876543322111100   00111221111       


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       232 ~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ...+.++.++|++.++..++.... ...|+.+.+.++.
T Consensus       231 ~~~r~~i~v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~  267 (341)
T d1sb8a_         231 ETSRDFCYIENTVQANLLAATAGL-DARNQVYNIAVGG  267 (341)
T ss_dssp             CCEECCEEHHHHHHHHHHHHTCCG-GGCSEEEEESCSC
T ss_pred             CEEEEEEEEeccchhhhhhhhccc-cccceeeeecccc
Confidence            112468899999999988875433 3467777776654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.1e-17  Score=143.34  Aligned_cols=219  Identities=13%  Similarity=0.073  Sum_probs=146.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .|+||||||+|.||+.++++|.++|+.|+++++......+..........+.....|+.+.            .+.++|+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~------------~~~~~d~   68 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP------------LYIEVDQ   68 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC------------CCCCCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH------------HHcCCCE
Confidence            3889999999999999999999999999999864322211122222233455555555432            1237999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc----------------
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------------  161 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~----------------  161 (280)
                      |||.|+....  .    .+.++..+.+++|+.+..++++++...     +-++|++||.+....                
T Consensus        69 VihlAa~~~~--~----~~~~~~~~~~~~Nv~g~~~ll~~~~~~-----~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~  137 (312)
T d2b69a1          69 IYHLASPASP--P----NYMYNPIKTLKTNTIGTLNMLGLAKRV-----GARLLLASTSEVYGDPEVHPQSEDYWGHVNP  137 (312)
T ss_dssp             EEECCSCCSH--H----HHTTCHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEEEGGGGBSCSSSSBCTTCCCBCCS
T ss_pred             EEECcccCCc--h----hHHhCHHHHHHHHHHHHHHHHHHHHHc-----CCcEEEEEChheecCCCCCCCCccccCCCCC
Confidence            9999986542  1    112345678899999999999887653     248999999755432                


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc-------cCC
Q 023553          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------NMQ  234 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~  234 (280)
                      ..+...|+.||.+.+.+++.+++++   |+.+..+.|+.+..|........  ...   .-.........       ...
T Consensus       138 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~--~i~---~~i~~~~~g~~i~i~~~g~~~  209 (312)
T d2b69a1         138 IGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGR--VVS---NFILQALQGEPLTVYGSGSQT  209 (312)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCC--HHH---HHHHHHHHTCCEEEESSSCCE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCcc--HHH---HHHHHHHcCCCeEEeCCCCee
Confidence            1234679999999999999998885   78999999999998864332110  000   00111111111       112


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       235 ~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ..++..+|++++++.++...    .+..+++.+|...
T Consensus       210 r~~i~v~D~~~~~~~~~~~~----~~~~~n~~~~~~~  242 (312)
T d2b69a1         210 RAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEH  242 (312)
T ss_dssp             EECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             EccEEHHHHHHHHHHHHhhc----cCCceEecCCccc
Confidence            46788999999999998543    3456777776544

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=6.3e-17  Score=139.86  Aligned_cols=225  Identities=12%  Similarity=0.075  Sum_probs=155.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           20 VALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      +||||||+|.||+.++++|+++| +.|+++++..+....    +....++.++.+|+++.+++.+.+.      .++|++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~----~~~~~~~~~i~~Di~~~~~~~~~~~------~~~d~V   71 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FLNHPHFHFVEGDISIHSEWIEYHV------KKCDVV   71 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG----GTTCTTEEEEECCTTTCSHHHHHHH------HHCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhh----hccCCCeEEEECccCChHHHHHHHH------hCCCcc
Confidence            58999999999999999999999 579988886554332    2234678999999998766543222      269999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC----------------
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG----------------  162 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~----------------  162 (280)
                      ||+|+....      ....++....+++|+.+..++++++...     +-+++++||.......                
T Consensus        72 ih~a~~~~~------~~~~~~~~~~~~~nv~gt~~ll~~~~~~-----~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~  140 (342)
T d2blla1          72 LPLVAIATP------IEYTRNPLRVFELDFEENLRIIRYCVKY-----RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (342)
T ss_dssp             EECBCCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             ccccccccc------cccccCCccccccccccccccccccccc-----cccccccccccccccccccccccccccccccc
Confidence            999997643      1233445678999999999999997653     2466677765543321                


Q ss_pred             --CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhh-HHHHhhh-------cc
Q 023553          163 --LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVARN-------AN  232 (280)
Q Consensus       163 --~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~  232 (280)
                        .+...|+.||.+.+.+++.+++.+   |+.+..+.|..+..+..................+ .......       ..
T Consensus       141 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~  217 (342)
T d2blla1         141 VNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK  217 (342)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSC
T ss_pred             cCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCC
Confidence              123579999999999999998885   7889999999998876554433221111111111 1111111       11


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCC
Q 023553          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       233 ~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      ..+.++..+|+++++..++........|+.+++.+|
T Consensus       218 ~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         218 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             eeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence            124588999999999999976544556899999644

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=3.5e-17  Score=141.15  Aligned_cols=219  Identities=14%  Similarity=0.020  Sum_probs=150.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-----hHHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-----LGQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-----~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .|++|||||+|.||+.+++.|.++|++|++++|...     ....+.....  ....+.++.+|+++.+++.+.++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            389999999999999999999999999999998532     1111111111  1256788899999999988777754  


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEcccccccc--------
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIG--------  161 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS~~~~~~--------  161 (280)
                         ++|++||.|+....      ..+.++....+..|+.+...+..++....... ...++++.||......        
T Consensus        79 ---~~D~Vih~Aa~~~~------~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~  149 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSET  149 (339)
T ss_dssp             ---CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTT
T ss_pred             ---ccchhhhccccccc------cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCC
Confidence               99999999987533      23445677889999999999888887654332 2345666665543222        


Q ss_pred             --CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh--------c
Q 023553          162 --GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN--------A  231 (280)
Q Consensus       162 --~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~  231 (280)
                        ..+...|+.+|.+.+.++..+++.+   ++.+..+.|+.+..|............    ..........        .
T Consensus       150 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~----~~~~~~~~~~~~~~~~g~~  222 (339)
T d1n7ha_         150 TPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKIT----RALGRIKVGLQTKLFLGNL  222 (339)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHH----HHHHHHHHTSCCCEEESCT
T ss_pred             CCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhh----HHHHHHhcCCCCeEEeCCC
Confidence              1235689999999999999988874   689999999999988643322111110    0001111110        1


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCC
Q 023553          232 NMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       232 ~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      ...+.++.++|+++++..++...
T Consensus       223 ~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         223 QASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             TCEEECEEHHHHHHHHHHHHTSS
T ss_pred             CccccceeeehHHHHHHHHHhcC
Confidence            11235788999999999998654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=1.3e-16  Score=139.00  Aligned_cols=227  Identities=15%  Similarity=0.004  Sum_probs=157.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++.+||||||+|.||+.|+++|.++|+.|+++++.......  ..   .....+..+|+.+.+.+.++++       ++|
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--~~---~~~~~~~~~D~~~~~~~~~~~~-------~~d   81 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--ED---MFCDEFHLVDLRVMENCLKVTE-------GVD   81 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--GG---GTCSEEEECCTTSHHHHHHHHT-------TCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--hh---cccCcEEEeechhHHHHHHHhh-------cCC
Confidence            57789999999999999999999999999999876543110  00   1245677889999987765544       899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC--------------
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--------------  162 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~--------------  162 (280)
                      .+||.|+....     .....+.....+..|+.+..+++.++...    +-.++|++||.......              
T Consensus        82 ~Vih~a~~~~~-----~~~~~~~~~~~~~~n~~gt~~ll~~~~~~----~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e  152 (363)
T d2c5aa1          82 HVFNLAADMGG-----MGFIQSNHSVIMYNNTMISFNMIEAARIN----GIKRFFYASSACIYPEFKQLETTNVSLKESD  152 (363)
T ss_dssp             EEEECCCCCCC-----HHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEEEEGGGSCGGGSSSSSSCEECGGG
T ss_pred             eEeeccccccc-----ccccccccccccccccchhhHHHHhHHhh----Ccccccccccccccccccccccccccccccc
Confidence            99999987543     11223456778889999999888887664    34589999997764421              


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh-----ccC
Q 023553          163 ----LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN-----ANM  233 (280)
Q Consensus       163 ----~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  233 (280)
                          .+...|+.+|.+.+.+++.+.+++   |+.+..+.|+.+..+..........................     ...
T Consensus       153 ~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  229 (363)
T d2c5aa1         153 AWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ  229 (363)
T ss_dssp             GSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCC
T ss_pred             CCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCe
Confidence                124579999999999999988775   78999999999998764433222111111000000000000     011


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       234 ~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .+.++..+|+++++..++...    .|+.+++.+|...
T Consensus       230 ~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~  263 (363)
T d2c5aa1         230 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  263 (363)
T ss_dssp             EECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             EEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCcc
Confidence            346899999999999998543    4677888777543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.7e-16  Score=127.51  Aligned_cols=199  Identities=13%  Similarity=0.083  Sum_probs=131.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ..|+++||||+|.||++++++|+++|+.|.++.|+.+++...     ....+.++.+|++|.+++.++++       +.|
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-----~~~~~~~~~gD~~d~~~l~~al~-------~~d   69 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----GPRPAHVVVGDVLQAADVDKTVA-------GQD   69 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-----cccccccccccccchhhHHHHhc-------CCC
Confidence            368899999999999999999999999999999998764321     12457789999999998766655       789


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC----ccchhhH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP----HAYTGSK  172 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~----~~Y~~sK  172 (280)
                      ++|+++|...+  .  ...         +++..+..+++++    +++++-.++|++||.......+..    ..|...|
T Consensus        70 ~vi~~~g~~~~--~--~~~---------~~~~~~~~~l~~a----a~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~  132 (205)
T d1hdoa_          70 AVIVLLGTRND--L--SPT---------TVMSEGARNIVAA----MKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDH  132 (205)
T ss_dssp             EEEECCCCTTC--C--SCC---------CHHHHHHHHHHHH----HHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHH
T ss_pred             EEEEEeccCCc--h--hhh---------hhhHHHHHHHHHH----HHhcCCCeEEEEeeeeccCCCccccccccccchHH
Confidence            99999987533  1  111         2233344444444    444556799999987654443322    2344455


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      .+.+.+       +...|+....|.||.+...-.........              . ......+++.+|+|++++.++.
T Consensus       133 ~~~e~~-------l~~~~~~~tiirp~~~~~~~~~~~~~~~~--------------~-~~~~~~~i~~~DvA~~~~~~l~  190 (205)
T d1hdoa_         133 IRMHKV-------LRESGLKYVAVMPPHIGDQPLTGAYTVTL--------------D-GRGPSRVISKHDLGHFMLRCLT  190 (205)
T ss_dssp             HHHHHH-------HHHTCSEEEEECCSEEECCCCCSCCEEES--------------S-SCSSCSEEEHHHHHHHHHHTTS
T ss_pred             HHHHHH-------HHhcCCceEEEecceecCCCCcccEEEee--------------C-CCCCCCcCCHHHHHHHHHHHhC
Confidence            544433       23468999999999885432211111000              0 0111457899999999999996


Q ss_pred             CCCCceeecEEEeCCC
Q 023553          253 DEARYISGTNLMVDGG  268 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG  268 (280)
                      .+.  ..|+++.+.+.
T Consensus       191 ~~~--~~g~~~~~s~~  204 (205)
T d1hdoa_         191 TDE--YDGHSTYPSHQ  204 (205)
T ss_dssp             CST--TTTCEEEEECC
T ss_pred             CCC--CCCEEEecCCc
Confidence            543  45787776543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.72  E-value=1e-17  Score=143.97  Aligned_cols=221  Identities=15%  Similarity=0.129  Sum_probs=153.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEE------ecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIA------DVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~------~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +||||||+|.||+.+++.|+++|+.|..+      +... ...............+.++..|+++........       
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-------   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccc-------
Confidence            58999999999999999999999865443      3221 111111122333457889999999998765332       


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC----------
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG----------  162 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~----------  162 (280)
                      ..+|.++|.|+....      ....+.....+++|+.+..++++++...    +..++|++||.+...+.          
T Consensus        75 ~~~d~vi~~a~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~~----~~~~~I~~Ss~~~yg~~~~~~~~E~~~  144 (322)
T d1r6da_          75 RGVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESSP  144 (322)
T ss_dssp             TTCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTSC
T ss_pred             cccceEEeecccccc------cccccchHHHhhhhHHHHHHHHHHHHHc----CCceEEEeecceeecCCCCCCCCCCCC
Confidence            389999999986533      2334556778899999999999988753    34689999997764432          


Q ss_pred             -CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHH-HHhhh-------ccC
Q 023553          163 -LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRN-FVARN-------ANM  233 (280)
Q Consensus       163 -~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~  233 (280)
                       .+...|+.+|.+.+.+++.+++++   |+.+..+.|+.+..+.......-        ..+.. .....       ...
T Consensus       145 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i--------~~~i~~~~~~~~i~v~~~g~~  213 (322)
T d1r6da_         145 LEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLI--------PLFVTNLLDGGTLPLYGDGAN  213 (322)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHH--------HHHHHHHHTTCCEEEETTSCC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHH--------HHHHHHHHcCCCcEEecCCCe
Confidence             134689999999999999998884   79999999999998754321110        11111 11111       011


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       234 ~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .+.++..+|+|+++..++....   .|+.+++.+|-..
T Consensus       214 ~r~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~  248 (322)
T d1r6da_         214 VREWVHTDDHCRGIALVLAGGR---AGEIYHIGGGLEL  248 (322)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             EEccEEHHHHHHHHHHHHhCCC---CCCeeEEeecccc
Confidence            2357899999999999996543   4788888776543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.71  E-value=2.3e-17  Score=143.06  Aligned_cols=214  Identities=13%  Similarity=0.083  Sum_probs=141.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc---chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD---NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .|+||||||+|.||+.++++|.+.|+.|.++.++.   .......+.+. ..++.++.+|++|.+.+..++.       .
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~Di~d~~~~~~~~~-------~   73 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDIADAELVDKLAA-------K   73 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-SSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhh-cCCeEEEEccCCCHHHHHHHHh-------h
Confidence            57899999999999999999999998755544321   11111111111 2478889999999998877654       7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-------------
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-------------  161 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-------------  161 (280)
                      .|.++|.|+....      ....++..+.+++|+.+..+++..+...     +.+++++||......             
T Consensus        74 ~~~v~~~a~~~~~------~~~~~~~~~~~~~N~~g~~nll~~~~~~-----~~k~i~~ss~~vyg~~~~~~~~~~~~~~  142 (346)
T d1oc2a_          74 ADAIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKY-----DIRFHHVSTDEVYGDLPLREDLPGHGEG  142 (346)
T ss_dssp             CSEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred             hhhhhhhhhcccc------cchhhCcccceeeehHhHHhhhhhhccc-----cccccccccceEecccCccccccccccC
Confidence            8889999986543      1223445678899999999999887664     247888877654321             


Q ss_pred             ----------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhc
Q 023553          162 ----------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA  231 (280)
Q Consensus       162 ----------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (280)
                                ..+...|+.+|.+.+.+++.+.+++   |+++..+.|+.+..|.................+.........
T Consensus       143 ~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g  219 (346)
T d1oc2a_         143 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEG  219 (346)
T ss_dssp             TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTS
T ss_pred             cccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCC
Confidence                      1123579999999999999988774   799999999999987532211111100000000000000111


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCC
Q 023553          232 NMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       232 ~~~~~~~~~~dva~~i~~l~s~  253 (280)
                      ...+.++..+|++++++.++..
T Consensus       220 ~~~r~~i~v~D~a~a~~~~~~~  241 (346)
T d1oc2a_         220 KNVRDWIHTNDHSTGVWAILTK  241 (346)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHH
T ss_pred             CccccccchhhHHHHHHHHHhh
Confidence            1224688999999999988754

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2.1e-16  Score=136.82  Aligned_cols=235  Identities=13%  Similarity=0.081  Sum_probs=158.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------c----chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQ------D----NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~------~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .|+||||||+|.||++++++|++.|+.|+++++.      .    ...... +... ..++.++.+|++|.+++.+++..
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~Dl~d~~~l~~~~~~   79 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRV-QELT-GRSVEFEEMDILDQGALQRLFKK   79 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHH-HHHH-TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHH-HHhc-CCCcEEEEeeccccccccccccc
Confidence            3789999999999999999999999999998642      1    112221 2221 24688999999999998776654


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----  162 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----  162 (280)
                           ..+|+++|.|+....      ..+.++..+.+++|+.+..++++++...    +-.+++++||.......     
T Consensus        80 -----~~~~~i~h~Aa~~~~------~~~~~~p~~~~~~Nv~gt~~l~~~~~~~----~v~~~i~~ss~~~~~~~~~~~~  144 (346)
T d1ek6a_          80 -----YSFMAVIHFAGLKAV------GESVQKPLDYYRVNLTGTIQLLEIMKAH----GVKNLVFSSSATVYGNPQYLPL  144 (346)
T ss_dssp             -----CCEEEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEEEGGGGCSCSSSSB
T ss_pred             -----cccccccccccccCc------HhhHhCHHHHHHhhhcccccccchhhhc----Ccccccccccceeeeccccccc
Confidence                 388999999987542      2334456788999999999988887653    33578988876654321     


Q ss_pred             -------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh--hhhhhhhhHHHHh-hhc-
Q 023553          163 -------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVA-RNA-  231 (280)
Q Consensus       163 -------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~-  231 (280)
                             ....+|+.+|.+.+...+.+++..  .++....+.|+.+.++......+....  .......+..... +.. 
T Consensus       145 ~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (346)
T d1ek6a_         145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD--KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREA  222 (346)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSC
T ss_pred             cccccccccCChHHHHHHHHHHHHHHHHHhc--cCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCc
Confidence                   134579999999999998876653  468888899988887753322211100  0000011111110 000 


Q ss_pred             -------------cCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCccc
Q 023553          232 -------------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       232 -------------~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~~  271 (280)
                                   ...+.++.++|+|.++..++........++++++.+|-..
T Consensus       223 i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~  275 (346)
T d1ek6a_         223 LNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (346)
T ss_dssp             EEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             EEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcc
Confidence                         0123589999999999887655555667889999887653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.70  E-value=3.9e-16  Score=134.04  Aligned_cols=231  Identities=18%  Similarity=0.144  Sum_probs=149.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      +||||||+|.||+.+++.|.++|+.|+++++-. .........+....++.++.+|+++.+++.++++..     ++|++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceE
Confidence            689999999999999999999999999987532 222222233333457889999999999988877754     79999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC---------------
Q 023553           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL---------------  163 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~---------------  163 (280)
                      ||+|+....      ....++....+++|+.|+.++++++...    +..++++.||.....+.+               
T Consensus        77 ih~aa~~~~------~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          77 FHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             EECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             Eeecccccc------cccccChHHHHHHHHHHHHHHHHhhhcc----ccccccccccccccccccccccccccccccccc
Confidence            999987532      1233456789999999999999887664    234566666655433321               


Q ss_pred             -------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhh-
Q 023553          164 -------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-  229 (280)
Q Consensus       164 -------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-  229 (280)
                                   +...|+.+|...+.+.......+   ++....+.|..+..+............. ........... 
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  222 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGW-FCQKAVEIKNGI  222 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHH-HHHHHHHHHTTC
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhcc---Ccccccccccceeeccccccccccccch-hhHHHHHHHhcc
Confidence                         24579999999999999988886   3455555544444333222111111000 00000000000 


Q ss_pred             --------hccCCCCCCCHHHHHHHHHHhcCCCCCceeecEEEeCCCcc
Q 023553          230 --------NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       230 --------~~~~~~~~~~~~dva~~i~~l~s~~~~~~~G~~i~~dgG~~  270 (280)
                              .....+.++..+|++++++.++... ....|+++.+.+|..
T Consensus       223 ~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~~~  270 (338)
T d1orra_         223 NKPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGTIV  270 (338)
T ss_dssp             CCCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSCGG
T ss_pred             CCceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCcccccccccc
Confidence                    0011235778999999999887542 245678888866643

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.70  E-value=4e-16  Score=135.18  Aligned_cols=171  Identities=15%  Similarity=0.125  Sum_probs=127.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch----HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL----GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .|+||||||+|.||+.+++.|++.|+.|+++++....    ........  ...+.++.+|++|.+++..+++..     
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~-----   73 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEY-----   73 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHS-----
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc--ccCCeEEEeecCCHHHHHHHHhcc-----
Confidence            3799999999999999999999999999998763221    11111111  246778899999999988777643     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc------------
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------------  161 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~------------  161 (280)
                      ++|++||.|+....      ....+.....+.+|+.+..++++++...-    -.++|++||......            
T Consensus        74 ~~d~VihlAa~~~~------~~~~~~~~~~~~~N~~~t~~ll~~~~~~~----i~~~i~~SS~~vyg~~~~~~~~~~~~e  143 (347)
T d1z45a2          74 KIDSVIHFAGLKAV------GESTQIPLRYYHNNILGTVVLLELMQQYN----VSKFVFSSSATVYGDATRFPNMIPIPE  143 (347)
T ss_dssp             CCCEEEECCSCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHHHHT----CCEEEEEEEGGGGCCGGGSTTCCSBCT
T ss_pred             CCCEEEEccccccc------cccccCcccccccchhhhHHHHHHHHhcc----cceEEeecceeeecCcccCCCCCcccc
Confidence            89999999987532      12234456788899999999999987642    248999999665431            


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceecccc
Q 023553          162 ---GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA  206 (280)
Q Consensus       162 ---~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~  206 (280)
                         ..+...|+.||.+.+.+++.+.... ..++.+..+.|+.+..+..
T Consensus       144 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~~~  190 (347)
T d1z45a2         144 ECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHP  190 (347)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCT
T ss_pred             ccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEeecC
Confidence               1134679999999999999887653 3468888888888876543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=1.4e-15  Score=129.80  Aligned_cols=199  Identities=13%  Similarity=0.046  Sum_probs=139.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      .|+||||||+|.||++|+++|+++|+.|+++++..+                   +|+.+.+.+..+++.-     ++|.
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~-------------------~~~~~~~~~~~~~~~~-----~~d~   57 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-------------------LNLLDSRAVHDFFASE-----RIDQ   57 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT-------------------CCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh-------------------ccccCHHHHHHHHhhc-----CCCE
Confidence            578999999999999999999999999887765432                   5899999888776632     8999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC--------------
Q 023553           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL--------------  163 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~--------------  163 (280)
                      ++|+|+....     ......+..+.+++|+.++.++++++...    +-.++|++||.+...+..              
T Consensus        58 v~~~a~~~~~-----~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~  128 (315)
T d1e6ua_          58 VYLAAAKVGG-----IVANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  128 (315)
T ss_dssp             EEECCCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             EEEcchhccc-----cccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence            9999976532     11233445667889999999998888663    335899999988653211              


Q ss_pred             --CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhh-hhhhHHHHhhh--------cc
Q 023553          164 --GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA-MVGFRNFVARN--------AN  232 (280)
Q Consensus       164 --~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~  232 (280)
                        ...+|+.||.+.+.+++.+.++.   |+++..+.|+.+..|............... .........+.        ..
T Consensus       129 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  205 (315)
T d1e6ua_         129 EPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGT  205 (315)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCc
Confidence              12469999999999999998885   799999999999988654332211111000 00000000000        01


Q ss_pred             CCCCCCCHHHHHHHHHHhcC
Q 023553          233 MQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       233 ~~~~~~~~~dva~~i~~l~s  252 (280)
                      ....+...+|+++++..++.
T Consensus       206 ~~~~~~~v~d~~~~~~~~~~  225 (315)
T d1e6ua_         206 PMREFLHVDDMAAASIHVME  225 (315)
T ss_dssp             CEECEEEHHHHHHHHHHHHH
T ss_pred             eEEEEEEeehhHHHHHHhhh
Confidence            12467788999999988763

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.65  E-value=1.5e-14  Score=126.75  Aligned_cols=236  Identities=17%  Similarity=0.152  Sum_probs=156.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEec---------CcchHHHHHHH---hC------CCCCeEEEecCCCCH
Q 023553           18 GRVALITGGATGIGESTVRLFHK-HGAKVCIADV---------QDNLGQQVCQS---LG------GEPDTFFCHCDVTKE   78 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~-~g~~Vi~~~r---------~~~~~~~~~~~---~~------~~~~~~~~~~D~~~~   78 (280)
                      +.+||||||+|.||+.++++|++ .|+.|+++++         ..+..+.....   ..      ....+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            45799999999999999999986 6899999874         11222222111   11      113577889999999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023553           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        79 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~  158 (280)
                      +.+.++++.    ..++|++||.|+....      ....+.....+++|+.+...++.++...    +..++++.++...
T Consensus        82 ~~l~~~~~~----~~~~d~ViH~Aa~~~~------~~~~~~~~~~~~~N~~~t~~~l~~~~~~----~~~~~~~~~s~~~  147 (383)
T d1gy8a_          82 DFLNGVFTR----HGPIDAVVHMCAFLAV------GESVRDPLKYYDNNVVGILRLLQAMLLH----KCDKIIFSSSAAI  147 (383)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEEEGGG
T ss_pred             HHhhhhhhc----cceeehhhcccccccc------cccccccccccccccccccccchhhhcc----CCccccccccccc
Confidence            988777764    3589999999987543      1233456778899999999998888763    3356777766554


Q ss_pred             ccc------------------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchh-hhhh
Q 023553          159 AIG------------------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER-TEDA  219 (280)
Q Consensus       159 ~~~------------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-~~~~  219 (280)
                      ...                  ..+...|+.+|.+.+.+++.+...   +|+.+.++.|+.+..+........... ....
T Consensus       148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~  224 (383)
T d1gy8a_         148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACGAHEDGDIGEHYQGSTHL  224 (383)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECCCTTSSCSCCSTTCCSH
T ss_pred             ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeeccCccccccccccccchh
Confidence            321                  123578999999999999998777   479999999999988876543322100 0000


Q ss_pred             hhhh-HHHHh-----------h------------------hccCCCCCCCHHHHHHHHHHhcCC------CCCceeecEE
Q 023553          220 MVGF-RNFVA-----------R------------------NANMQGTELTANDVANAVLFLASD------EARYISGTNL  263 (280)
Q Consensus       220 ~~~~-~~~~~-----------~------------------~~~~~~~~~~~~dva~~i~~l~s~------~~~~~~G~~i  263 (280)
                      ++.. .....           .                  .....+.++..+|++++++.++..      ......++++
T Consensus       225 ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~  304 (383)
T d1gy8a_         225 IPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVF  304 (383)
T ss_dssp             HHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEE
T ss_pred             HHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEE
Confidence            0000 00000           0                  001113467899999999887642      2234467889


Q ss_pred             EeCCCcc
Q 023553          264 MVDGGFT  270 (280)
Q Consensus       264 ~~dgG~~  270 (280)
                      ++.+|-.
T Consensus       305 Ni~s~~~  311 (383)
T d1gy8a_         305 NLGTSRG  311 (383)
T ss_dssp             EESCSCC
T ss_pred             EeCCCCc
Confidence            9988753

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.64  E-value=4.1e-15  Score=121.17  Aligned_cols=225  Identities=11%  Similarity=0.019  Sum_probs=144.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCe--EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAK--VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      -++||||||+|.||++++++|+++|+.  |+...|++++....    .  ..+.++.+|+++.+++.++++       ++
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~~~-------~~   69 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI----G--GEADVFIGDITDADSINPAFQ-------GI   69 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT----T--CCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc----c--CCcEEEEeeeccccccccccc-------cc
Confidence            479999999999999999999999976  55566776654332    2  356688899999998776654       89


Q ss_pred             cEEEECCCCCCCCCC-------CCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023553           96 DIMVNNAGISGAPCP-------DIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        96 d~li~~ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (280)
                      |.+||+++.......       .........+.....+|+.+...++.......    .+...+.++.....+......+
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~~~~~~~~~~  145 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG----VKHIVVVGSMGGTNPDHPLNKL  145 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT----CSEEEEEEETTTTCTTCGGGGG
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc----ccccccccccccCCCCcccccc
Confidence            999999987542101       11122233455666788888888777766543    4677777776665554444333


Q ss_pred             hhhHH-HHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHH
Q 023553          169 TGSKH-AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       169 ~~sK~-al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  247 (280)
                      ..++. ........+..+   .|+++..+.||.+..+.............           ........+++++|+|+++
T Consensus       146 ~~~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-----------~~~~~~~~~i~~~Dva~a~  211 (252)
T d2q46a1         146 GNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVRELLVGKDD-----------ELLQTDTKTVPRADVAEVC  211 (252)
T ss_dssp             GGCCHHHHHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSCEEEESTT-----------GGGGSSCCEEEHHHHHHHH
T ss_pred             cccchhhhhhhhhhhhhc---ccccceeecceEEECCCcchhhhhhccCc-----------ccccCCCCeEEHHHHHHHH
Confidence            33333 222223333233   57899999999998875432211110000           0001114578899999999


Q ss_pred             HHhcCCCCCceeecEEEeCCCcccccCc
Q 023553          248 LFLASDEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       248 ~~l~s~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      +.++..+  ...|+++++.|+-...+.+
T Consensus       212 ~~~l~~~--~~~g~~~~i~~~~~~~~~~  237 (252)
T d2q46a1         212 IQALLFE--EAKNKAFDLGSKPEGTSTP  237 (252)
T ss_dssp             HHHTTCG--GGTTEEEEEEECCTTTSCC
T ss_pred             HHHhCCc--cccCcEEEEeeCCCCCChh
Confidence            9988543  3578899997765444433

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.7e-14  Score=117.93  Aligned_cols=197  Identities=14%  Similarity=0.104  Sum_probs=132.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      -++|+||||||+|.||++++++|.+.|.  +|+++.|++.......     ...+....+|+.+.+++.       +.+.
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----~~~i~~~~~D~~~~~~~~-------~~~~   79 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYA-------SAFQ   79 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGG-------GGGS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----cceeeeeeeccccccccc-------cccc
Confidence            4689999999999999999999999996  7999999865432211     135566778888765543       3334


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ..|++||++|...         .........++|+.++..+++.+..    .+-.++|++|+......  ....|+.+|.
T Consensus        80 ~~d~vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~~--~~~~Y~~~K~  144 (232)
T d2bkaa1          80 GHDVGFCCLGTTR---------GKAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADKS--SNFLYLQVKG  144 (232)
T ss_dssp             SCSEEEECCCCCH---------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHH
T ss_pred             ccccccccccccc---------cccchhhhhhhcccccceeeecccc----cCccccccCCccccccC--ccchhHHHHH
Confidence            8999999998542         2244566778899999998888755    34468999999876543  3467999999


Q ss_pred             HHHHHHHHHHHHHCCCCe-EEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhcc--CCCCCCCHHHHHHHHHHh
Q 023553          174 AVLGLNKNVAAELGKYGI-RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN--MQGTELTANDVANAVLFL  250 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~i~~l  250 (280)
                      ..+...+.       .|. ++..+.||.+..+........  ..      ...+......  .....++++|+|++++.+
T Consensus       145 ~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~  209 (232)
T d2bkaa1         145 EVEAKVEE-------LKFDRYSVFRPGVLLCDRQESRPGE--WL------VRKFFGSLPDSWASGHSVPVVTVVRAMLNN  209 (232)
T ss_dssp             HHHHHHHT-------TCCSEEEEEECCEEECTTGGGSHHH--HH------HHHHHCSCCTTGGGGTEEEHHHHHHHHHHH
T ss_pred             Hhhhcccc-------ccccceEEecCceeecCCCcCcHHH--HH------HHHHhhccCCcccCCCeEEHHHHHHHHHHH
Confidence            88765533       233 577789999988753321110  00      0011100000  113457889999999887


Q ss_pred             cCCC
Q 023553          251 ASDE  254 (280)
Q Consensus       251 ~s~~  254 (280)
                      +...
T Consensus       210 ~~~~  213 (232)
T d2bkaa1         210 VVRP  213 (232)
T ss_dssp             HTSC
T ss_pred             HhcC
Confidence            7543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.32  E-value=2e-11  Score=101.41  Aligned_cols=192  Identities=18%  Similarity=0.144  Sum_probs=128.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      ++|||||+|.||+.++++|.++|+.|+.++|+.                    +|++|.+++.++++..     ++|++|
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------~D~~d~~~~~~~l~~~-----~~d~vi   57 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------LDITNVLAVNKFFNEK-----KPNVVI   57 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------CCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------ccCCCHHHHHHHHHHc-----CCCEEE
Confidence            589999999999999999999999999998753                    4899999988877754     899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCccc
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  168 (280)
                      |+|+....      +.+.......+..|+.....+.......     ...+++.||......           ..+...|
T Consensus        58 h~a~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~  126 (281)
T d1vl0a_          58 NCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAY  126 (281)
T ss_dssp             ECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHH
T ss_pred             eecccccc------ccccccchhhcccccccccccccccccc-----cccccccccceeeeccccccccccccccchhhh
Confidence            99986532      1233445667778888887776666554     235666665443221           2245678


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh-----ccCCCCCCCHHHH
Q 023553          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN-----ANMQGTELTANDV  243 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dv  243 (280)
                      +.+|.+.+.+.+.       .+.+...+.|+.+..+...-       ....   ......+.     ....+.++..+|+
T Consensus       127 ~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~i~v~D~  189 (281)
T d1vl0a_         127 GKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNF-------VKTM---INLGKTHDELKVVHDQVGTPTSTVDL  189 (281)
T ss_dssp             HHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCH-------HHHH---HHHHHHCSEEEEESSCEECCEEHHHH
T ss_pred             hhhhhHHHHHHHH-------hCCCccccceeEEeCCCccc-------ccch---hhhhccCCceeecCCceeccchhhhh
Confidence            8888887766543       24567789999998764211       0000   11111110     0112477899999


Q ss_pred             HHHHHHhcCCCCCceeecEEEeCCC
Q 023553          244 ANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       244 a~~i~~l~s~~~~~~~G~~i~~dgG  268 (280)
                      ++++.+++....   +| .+++.+|
T Consensus       190 ~~~~~~~~~~~~---~g-~~~~~~~  210 (281)
T d1vl0a_         190 ARVVLKVIDEKN---YG-TFHCTCK  210 (281)
T ss_dssp             HHHHHHHHHHTC---CE-EEECCCB
T ss_pred             hhhhhhhhhhcc---cC-ceeEeCC
Confidence            999999996533   35 4444444

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.32  E-value=2.8e-12  Score=102.82  Aligned_cols=190  Identities=15%  Similarity=0.094  Sum_probs=119.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .|++|||||+|.||++++++|.++|+  +|+...|++..         ....   +..+..+..++   .+   ...+.+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~---------~~~~---~~~~~~d~~~~---~~---~~~~~~   63 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPR---LDNPVGPLAEL---LP---QLDGSI   63 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTT---EECCBSCHHHH---GG---GCCSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh---------hccc---ccccccchhhh---hh---ccccch
Confidence            48999999999999999999999998  46666665432         1112   23344444332   11   223579


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |.+|+++|.....        ...-+...++|+.++..+++++..    .+-.+++++||..+..  .....|..+|...
T Consensus        64 d~vi~~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~  129 (212)
T d2a35a1          64 DTAFCCLGTTIKE--------AGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADA--KSSIFYNRVKGEL  129 (212)
T ss_dssp             SEEEECCCCCHHH--------HSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHHHHHHHH
T ss_pred             heeeeeeeeeccc--------cccccccccchhhhhhhccccccc----cccccccccccccccc--ccccchhHHHHHH
Confidence            9999999865320        112356778899999888887754    4456899999876643  3456799999887


Q ss_pred             HHHHHHHHHHHCCCCe-EEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023553          176 LGLNKNVAAELGKYGI-RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  254 (280)
                      +...+       ..+. +...+.|+.+..+...........  ...  ...+..+     .+.+..+|+|++++.++..+
T Consensus       130 E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~--~~~--~~~~~~~-----~~~i~v~DvA~ai~~~~~~~  193 (212)
T d2a35a1         130 EQALQ-------EQGWPQLTIARPSLLFGPREEFRLAEILA--API--ARILPGK-----YHGIEACDLARALWRLALEE  193 (212)
T ss_dssp             HHHHT-------TSCCSEEEEEECCSEESTTSCEEGGGGTT--CCC--C----CH-----HHHHHHHHHHHHHHHHHTCC
T ss_pred             hhhcc-------ccccccceeeCCcceeCCcccccHHHHHH--HHH--hhccCCC-----CcEEEHHHHHHHHHHHHcCC
Confidence            76543       2343 577889999987653321111000  000  0000000     12367899999999998654


Q ss_pred             C
Q 023553          255 A  255 (280)
Q Consensus       255 ~  255 (280)
                      .
T Consensus       194 ~  194 (212)
T d2a35a1         194 G  194 (212)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.31  E-value=9.2e-12  Score=104.79  Aligned_cols=216  Identities=10%  Similarity=0.007  Sum_probs=121.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH----HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG----QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++||||||+|.||+.++++|.++|++|+++.|+....    .+...... ...+.++.+|+++.+++.+.++       
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~-~~~v~~v~~d~~d~~~~~~~~~-------   74 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK-QLGAKLIEASLDDHQRLVDALK-------   74 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH-TTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc-cCCcEEEEeecccchhhhhhcc-------
Confidence            35599999999999999999999999999999975421    11111221 2457788999999988766555       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC-CccchhhH
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-PHAYTGSK  172 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~-~~~Y~~sK  172 (280)
                      ..+.++++++....                 ..|..+...++.++..    ....++++.||......... ...|..++
T Consensus        75 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~a~~----~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~  133 (312)
T d1qyda_          75 QVDVVISALAGGVL-----------------SHHILEQLKLVEAIKE----AGNIKRFLPSEFGMDPDIMEHALQPGSIT  133 (312)
T ss_dssp             TCSEEEECCCCSSS-----------------STTTTTHHHHHHHHHH----SCCCSEEECSCCSSCTTSCCCCCSSTTHH
T ss_pred             Ccchhhhhhhhccc-----------------ccchhhhhHHHHHHHH----hcCCcEEEEeeccccCCCcccccchhhhh
Confidence            78888888864322                 1233344444444433    33456777776543332221 12233333


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  252 (280)
                      ......++.+..+   .++....+.|+.+..+.....................  .........+++++|+|++++.++.
T Consensus       134 ~~~~~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~i~v~Dva~a~~~~l~  208 (312)
T d1qyda_         134 FIDKRKVRRAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLI--YGDGNVKGIWVDEDDVGTYTIKSID  208 (312)
T ss_dssp             HHHHHHHHHHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECC--BTTSCSEEEEECHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHhhcc---cccceEEeccceeecCCccchhhHHHHhhhccccccc--ccccccccceeeHHHHHHHHHHHhc
Confidence            3333333333333   4677888899988765433221110000000000000  0001112458899999999999985


Q ss_pred             CCCCceeecEEEeCCC
Q 023553          253 DEARYISGTNLMVDGG  268 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG  268 (280)
                      .. ...++..+.+.++
T Consensus       209 ~~-~~~~~~~~~~~~~  223 (312)
T d1qyda_         209 DP-QTLNKTMYIRPPM  223 (312)
T ss_dssp             CG-GGSSSEEECCCGG
T ss_pred             Cc-cccCceEEEeCCC
Confidence            42 2233334444444

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.19  E-value=4.9e-11  Score=99.55  Aligned_cols=198  Identities=11%  Similarity=0.073  Sum_probs=118.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH-----HHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ-----VCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.|+||||||+|.||+++++.|.+.|+.|++++|+......     ....+. ...+.++.+|+.+.+...+.++     
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-----   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK-----   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhh-----
Confidence            36889999999999999999999999999999997543211     111111 2356788999999988776665     


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                        ..+.+|+.++....                     .+...+.+++..    ....++++.||............+...
T Consensus        76 --~~~~vi~~~~~~~~---------------------~~~~~~~~a~~~----~~~~~~~~~s~~~~~~~~~~~~~~~~~  128 (307)
T d1qyca_          76 --NVDVVISTVGSLQI---------------------ESQVNIIKAIKE----VGTVKRFFPSEFGNDVDNVHAVEPAKS  128 (307)
T ss_dssp             --TCSEEEECCCGGGS---------------------GGGHHHHHHHHH----HCCCSEEECSCCSSCTTSCCCCTTHHH
T ss_pred             --hceeeeeccccccc---------------------chhhHHHHHHHH----hccccceeeeccccccccccccccccc
Confidence              78899998865322                     122333344333    233467777765444433333444444


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023553          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  251 (280)
                      +............+   .++....+.|+.+..+............... . ...+ .........++..+|+|++++.++
T Consensus       129 ~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~i~v~Dva~~~~~~l  202 (307)
T d1qyca_         129 VFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPR-D-KVVI-LGDGNARVVFVKEEDIGTFTIKAV  202 (307)
T ss_dssp             HHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCS-S-EEEE-ETTSCCEEEEECHHHHHHHHHTTS
T ss_pred             cccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhc-c-ccee-eecccccccCCcHHHHHHHHHHHh
Confidence            44433333333333   4677888999998776533211110000000 0 0000 000111246889999999999999


Q ss_pred             CC
Q 023553          252 SD  253 (280)
Q Consensus       252 s~  253 (280)
                      ..
T Consensus       203 ~~  204 (307)
T d1qyca_         203 DD  204 (307)
T ss_dssp             SC
T ss_pred             cC
Confidence            64

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.19  E-value=6.1e-11  Score=101.97  Aligned_cols=215  Identities=13%  Similarity=0.010  Sum_probs=126.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +.|+|+||||+|.||+++++.|.++|++|+++.|+..+....  .+.....+.++.+|+.|..++.   +   ..+...|
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--~~~~~~~v~~~~gD~~d~~~~~---~---~a~~~~~   73 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--ELQAIPNVTLFQGPLLNNVPLM---D---TLFEGAH   73 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--HHHTSTTEEEEESCCTTCHHHH---H---HHHTTCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--hhcccCCCEEEEeeCCCcHHHH---H---HHhcCCc
Confidence            579999999999999999999999999999999987654332  2222346788999999966532   1   2235788


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCC--CCccchhhHHH
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL--GPHAYTGSKHA  174 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~--~~~~Y~~sK~a  174 (280)
                      .++.+......                  .++....+++.++..    .+..++++.||........  ....|..+|..
T Consensus        74 ~~~~~~~~~~~------------------~~~~~~~~~~~aa~~----agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~  131 (350)
T d1xgka_          74 LAFINTTSQAG------------------DEIAIGKDLADAAKR----AGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFT  131 (350)
T ss_dssp             EEEECCCSTTS------------------CHHHHHHHHHHHHHH----HSCCSEEEEEECCCGGGTSSCCCCTTTHHHHH
T ss_pred             eEEeecccccc------------------hhhhhhhHHHHHHHH----hCCCceEEEeeccccccCCcccchhhhhhHHH
Confidence            88877642211                  122333444555433    3345788888866544332  34567777876


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhhhhhhhhhHHHHhhh-ccCCCCCCC-HHHHHHHHHHhcC
Q 023553          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN-ANMQGTELT-ANDVANAVLFLAS  252 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~dva~~i~~l~s  252 (280)
                      .+.+.+.       .++....+.|+.+.........+...... ...+...+..-. ......+++ .+|+++++..++.
T Consensus       132 ~~~~~~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~  203 (350)
T d1xgka_         132 VENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMEL-MPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFK  203 (350)
T ss_dssp             HHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEE-CTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHh-------hccCceeeeeceeeccccccccccccccc-cccccceeeecccCCCcceEEEeHHHHHHHHHHHHh
Confidence            6555432       35677888888876554322221100000 000000000000 000011234 4789999988885


Q ss_pred             CCCCceeecEEEeCCCc
Q 023553          253 DEARYISGTNLMVDGGF  269 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~  269 (280)
                      .......|+.+.+.|..
T Consensus       204 ~~~~~~~G~~~~~~g~~  220 (350)
T d1xgka_         204 DGPQKWNGHRIALTFET  220 (350)
T ss_dssp             HCHHHHTTCEEEECSEE
T ss_pred             CChhhcCCeEEEEeCCc
Confidence            43334578888887653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.16  E-value=7.7e-11  Score=98.38  Aligned_cols=129  Identities=20%  Similarity=0.116  Sum_probs=92.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      ++|||||+|.||+++++.|.+.|+.|. ++++...                +..|+++.+.+.++++..     ++|+||
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~~----------------~~~Dl~~~~~~~~~i~~~-----~~D~Vi   59 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSKE----------------FCGDFSNPKGVAETVRKL-----RPDVIV   59 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCSS----------------SCCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCcc----------------ccCcCCCHHHHHHHHHHc-----CCCEEE
Confidence            599999999999999999999987554 4443321                236999999988887754     899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCccc
Q 023553          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  168 (280)
                      |.||....  .    .+.+.-...++.|+.+...+.+++..     .+.+++++||.....+.           .+...|
T Consensus        60 h~Aa~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y  128 (298)
T d1n2sa_          60 NAAAHTAV--D----KAESEPELAQLLNATSVEAIAKAANE-----TGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (298)
T ss_dssp             ECCCCCCH--H----HHTTCHHHHHHHHTHHHHHHHHHHTT-----TTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             Eecccccc--c----ccccCccccccccccccccchhhhhc-----cccccccccccccccCCCCCCCccccccCCCchH
Confidence            99997642  1    12233467778899999888877633     34678888876554321           134689


Q ss_pred             hhhHHHHHHHHHH
Q 023553          169 TGSKHAVLGLNKN  181 (280)
Q Consensus       169 ~~sK~al~~~~~~  181 (280)
                      +.+|.+.+.+.+.
T Consensus       129 ~~~k~~~e~~~~~  141 (298)
T d1n2sa_         129 GKTKLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhHHh
Confidence            9999887766543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.08  E-value=7.5e-10  Score=92.53  Aligned_cols=217  Identities=15%  Similarity=0.107  Sum_probs=126.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcc--hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH--HhCCc
Q 023553           21 ALITGGATGIGESTVRLFHKHGA-KVCIADVQDN--LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE--KFGTL   95 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~i   95 (280)
                      ||||||+|.||+.+++.|+++|+ .|+++++-..  ......   ..      ..+|..+.+..   ......  .+..+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~---~~------~~~~~~~~~~~---~~~~~~~~~~~~~   69 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV---DL------NIADYMDKEDF---LIQIMAGEEFGDV   69 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH---TS------CCSEEEEHHHH---HHHHHTTCCCSSC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc---cc------chhhhccchHH---HHHHhhhhcccch
Confidence            89999999999999999999997 5877763322  121111   10      11233333332   233322  23578


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCC
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLG  164 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~-----------~~~  164 (280)
                      +.+++.|+....     ...   ......+.|+.+...+.++....-     -++++.||.....+           ..+
T Consensus        70 ~~i~~~aa~~~~-----~~~---~~~~~~~~~~~~~~~~l~~~~~~~-----i~~v~~ss~~~~~~~~~~~~~~~~~~~~  136 (307)
T d1eq2a_          70 EAIFHEGACSST-----TEW---DGKYMMDNNYQYSKELLHYCLERE-----IPFLYASSAATYGGRTSDFIESREYEKP  136 (307)
T ss_dssp             CEEEECCSCCCT-----TCC---CHHHHHHHTHHHHHHHHHHHHHHT-----CCEEEEEEGGGGTTCCSCBCSSGGGCCC
T ss_pred             hhhhhhcccccc-----ccc---cccccccccccccccccccccccc-----cccccccccccccccccccccccccccc
Confidence            899998875432     112   234566777888887777766542     24566665555432           224


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccccccCCCcchhh----hhhhhhhHHH-HhhhccCCCCCCC
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT----EDAMVGFRNF-VARNANMQGTELT  239 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~  239 (280)
                      ...|+.+|.+.+.+++.+..+   .++.+..+.|..+..+............    .....+.... ..........++.
T Consensus       137 ~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~  213 (307)
T d1eq2a_         137 LNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY  213 (307)
T ss_dssp             SSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEE
T ss_pred             ccccccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeee
Confidence            578999999999999887555   5788999999999887543221111000    0000000000 0111112357889


Q ss_pred             HHHHHHHHHHhcCCCCCceeecEEEeCCCc
Q 023553          240 ANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       240 ~~dva~~i~~l~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++|+++++..++....    ...+++.+|-
T Consensus       214 v~d~~~~~~~~~~~~~----~~~~~~~~~~  239 (307)
T d1eq2a_         214 VGDVADVNLWFLENGV----SGIFNLGTGR  239 (307)
T ss_dssp             HHHHHHHHHHHHHHCC----CEEEEESCSC
T ss_pred             cccHHHHHHHHhhhcc----cccccccccc
Confidence            9999999998886432    2356665553

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.94  E-value=2.8e-14  Score=113.00  Aligned_cols=170  Identities=7%  Similarity=-0.018  Sum_probs=91.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEec--------------CCCCHHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC--------------DVTKEEDVCSA   84 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~--------------D~~~~~~~~~~   84 (280)
                      ++.|+||+|++|+++|+.|+++|++|++.+|++++++++.+++... ........              ...... ....
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   80 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEH-AIDT   80 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHH-HHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeec-cchH
Confidence            4677888899999999999999999999999999888877665321 11111111              111111 1111


Q ss_pred             HHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCC
Q 023553           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        85 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~  164 (280)
                      .......................               ....+......+.+.....+........+++.+.....+...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (212)
T d1jaya_          81 ARDLKNILREKIVVSPLVPVSRG---------------AKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDE  145 (212)
T ss_dssp             HHHTHHHHTTSEEEECCCCEECC---------------TTCCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHCTTC
T ss_pred             HHHhhhhhccccccccccccccc---------------cccccccccchhhhhhhhhhhhhcccccceeecHHHhcCccc
Confidence            11111111111122221111111               011111111111222333332333333444444444445555


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCceeccc
Q 023553          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL  205 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  205 (280)
                      ...|..++++....++..+.++....+.++.+.||.+++..
T Consensus       146 ~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a~  186 (212)
T d1jaya_         146 KFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSR  186 (212)
T ss_dssp             CCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHH
T ss_pred             ccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHHH
Confidence            66777777777778888777776666778899999887654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.28  E-value=1.7e-06  Score=66.31  Aligned_cols=107  Identities=16%  Similarity=0.112  Sum_probs=70.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .+|.++||+||+||.|...++.....|++|+.+.+++++.+... .+..  + .++  |-.+..  .+....+  .-+++
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa--~-~vi--~~~~~~--~~~~~~~--~~~gv   99 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGA--K-EVL--AREDVM--AERIRPL--DKQRW   99 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTC--S-EEE--ECC-----------C--CSCCE
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hccc--c-eee--ecchhH--HHHHHHh--hccCc
Confidence            35899999999999999999999899999999999988866553 3332  2 222  222211  1111111  11489


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccC
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG  162 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~  162 (280)
                      |++|.+.|...                            ....+..|  +.+|+++.++...+....
T Consensus       100 D~vid~vgg~~----------------------------~~~~l~~l--~~~Griv~~G~~~g~~~~  136 (176)
T d1xa0a2         100 AAAVDPVGGRT----------------------------LATVLSRM--RYGGAVAVSGLTGGAEVP  136 (176)
T ss_dssp             EEEEECSTTTT----------------------------HHHHHHTE--EEEEEEEECSCCSSSCCC
T ss_pred             CEEEEcCCchh----------------------------HHHHHHHh--CCCceEEEeecccCcccC
Confidence            99999998421                            33455665  347999999987766543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.13  E-value=1.3e-05  Score=60.70  Aligned_cols=83  Identities=19%  Similarity=0.193  Sum_probs=57.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   94 (280)
                      ..|.+++|+| +|++|...++.+...|++|+++++++++++...+ +.  .... +..|-. .++.....+.+.+.. ++
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~g--a~~~-~~~~~~-~~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CG--ADVT-LVVDPA-KEEESSIIERIRSAIGDL   98 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TT--CSEE-EECCTT-TSCHHHHHHHHHHHSSSC
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-cC--CcEE-Eecccc-ccccchhhhhhhcccccC
Confidence            3688999997 6899999999998999999999999998765544 32  1222 222222 122233345555555 37


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus        99 ~D~vid~~g~  108 (170)
T d1e3ja2          99 PNVTIDCSGN  108 (170)
T ss_dssp             CSEEEECSCC
T ss_pred             CceeeecCCC
Confidence            9999999974

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.02  E-value=3.5e-06  Score=64.83  Aligned_cols=105  Identities=18%  Similarity=0.171  Sum_probs=70.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|+++||+||++++|...++.....|++|+.+.+++++.+... .+.  .+..+   |..+++..++..+...  -+++|
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-~~G--a~~vi---~~~~~~~~~~~~~~~~--~~Gvd  100 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIG--FDAAF---NYKTVNSLEEALKKAS--PDGYD  100 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTT--CSEEE---ETTSCSCHHHHHHHHC--TTCEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-hhh--hhhhc---ccccccHHHHHHHHhh--cCCCc
Confidence            6999999999999999999999999999999999988655443 332  22222   2233322222222211  14799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA  159 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~  159 (280)
                      +++++.|.  +                          ..+..++.+  +.+|+++.++...+.
T Consensus       101 ~v~D~vG~--~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~~  133 (182)
T d1v3va2         101 CYFDNVGG--E--------------------------FLNTVLSQM--KDFGKIAICGAISVY  133 (182)
T ss_dssp             EEEESSCH--H--------------------------HHHHHGGGE--EEEEEEEECCCGGGT
T ss_pred             eeEEecCc--h--------------------------hhhhhhhhc--cCCCeEEeecceeec
Confidence            99999972  1                          134556666  346899988765543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.00  E-value=1.7e-05  Score=60.10  Aligned_cols=75  Identities=15%  Similarity=0.205  Sum_probs=56.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++|+++|.|| |.+|+.+|+.|+++|++|++++|+.++.+++.+...   .......+..+.......+.       ..|
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~---~~~~~~~~~~~~~~~~~~i~-------~~~   69 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ---HSTPISLDVNDDAALDAEVA-------KHD   69 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCT---TEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccc---ccccccccccchhhhHhhhh-------ccc
Confidence            3789999987 999999999999999999999999999888766443   34445566666655544433       667


Q ss_pred             EEEECC
Q 023553           97 IMVNNA  102 (280)
Q Consensus        97 ~li~~a  102 (280)
                      .++...
T Consensus        70 ~~i~~~   75 (182)
T d1e5qa1          70 LVISLI   75 (182)
T ss_dssp             EEEECS
T ss_pred             eeEeec
Confidence            777554

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.99  E-value=1.7e-05  Score=60.93  Aligned_cols=84  Identities=14%  Similarity=0.251  Sum_probs=63.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHH---HHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVC---QSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .++++|+|+|.|+ ||.|++++..|++.|. .++++.|+.+..++..   +.+..........+|+.+.+++...+.   
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA---   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc---
Confidence            4689999999999 6999999999999998 4888899877655443   333333334455678888887654444   


Q ss_pred             HHhCCccEEEECCCCC
Q 023553           90 EKFGTLDIMVNNAGIS  105 (280)
Q Consensus        90 ~~~g~id~li~~ag~~  105 (280)
                          ..|++||+..+.
T Consensus        90 ----~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 ----SADILTNGTKVG  101 (182)
T ss_dssp             ----TCSEEEECSSTT
T ss_pred             ----ccceeccccCCc
Confidence                889999997653

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.98  E-value=4e-06  Score=64.96  Aligned_cols=87  Identities=15%  Similarity=0.125  Sum_probs=53.1

Q ss_pred             CCcEEEE-EcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH-HhCC
Q 023553           17 VGRVALI-TGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE-KFGT   94 (280)
Q Consensus        17 ~~k~vlI-tGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~   94 (280)
                      +|.+++| +||++++|.+.++.....|++|+++.|+.+..++..+.++..+.-.++..|-.+..+....+.++.+ .-++
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCC
Confidence            4655555 6999999999999888899999999888776655544433222112222211111122222333333 3357


Q ss_pred             ccEEEECCC
Q 023553           95 LDIMVNNAG  103 (280)
Q Consensus        95 id~li~~ag  103 (280)
                      +|+++++.|
T Consensus       108 vdvv~D~vg  116 (189)
T d1gu7a2         108 AKLALNCVG  116 (189)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999886

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=7e-06  Score=62.58  Aligned_cols=77  Identities=16%  Similarity=0.220  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      +|++|||+||++++|...++.....|++|+++.+++++.+.+ +++.  .+ .+  .|.++++-    .+++++..  .+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~~G--a~-~v--i~~~~~~~----~~~i~~~t~~~g   97 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNG--AH-EV--FNHREVNY----IDKIKKYVGEKG   97 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT--CS-EE--EETTSTTH----HHHHHHHHCTTC
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc-cccC--cc-cc--cccccccH----HHHhhhhhccCC
Confidence            689999999999999999999989999999999887765544 4443  22 22  25555443    33444333  36


Q ss_pred             ccEEEECCC
Q 023553           95 LDIMVNNAG  103 (280)
Q Consensus        95 id~li~~ag  103 (280)
                      +|+++.+.|
T Consensus        98 ~d~v~d~~g  106 (174)
T d1yb5a2          98 IDIIIEMLA  106 (174)
T ss_dssp             EEEEEESCH
T ss_pred             ceEEeeccc
Confidence            999999876

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.96  E-value=3.4e-05  Score=57.83  Aligned_cols=74  Identities=16%  Similarity=0.337  Sum_probs=57.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++++++++|.|+ |++|+.+++.|...|+ .+.++.|+.++.+++.+.+..    ...  ++.   ++...+       .
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~----~~~--~~~---~~~~~l-------~   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG----EAV--RFD---ELVDHL-------A   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC----EEC--CGG---GHHHHH-------H
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc----ccc--cch---hHHHHh-------c
Confidence            689999999998 9999999999999998 488999999888888877652    121  222   222222       3


Q ss_pred             CccEEEECCCCC
Q 023553           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~id~li~~ag~~  105 (280)
                      ..|++|++.+..
T Consensus        84 ~~Divi~atss~   95 (159)
T d1gpja2          84 RSDVVVSATAAP   95 (159)
T ss_dssp             TCSEEEECCSSS
T ss_pred             cCCEEEEecCCC
Confidence            899999998754

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.92  E-value=4.2e-05  Score=58.52  Aligned_cols=81  Identities=19%  Similarity=0.240  Sum_probs=55.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--   92 (280)
                      .+|.+++|+|+ |++|...++.+...|+ +|+++++++++++.. +++.  .+ .++...-.+..+   ..+++.+..  
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~lG--a~-~vi~~~~~~~~~---~~~~i~~~~~~   98 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIG--AD-LTLNRRETSVEE---RRKAIMDITHG   98 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTT--CS-EEEETTTSCHHH---HHHHHHHHTTT
T ss_pred             CCCCEEEEECC-Cccchhheeccccccccccccccccccccccc-cccc--ce-EEEeccccchHH---HHHHHHHhhCC
Confidence            36899999997 8999999999999998 699999999887654 4443  12 233222222222   234444443  


Q ss_pred             CCccEEEECCCC
Q 023553           93 GTLDIMVNNAGI  104 (280)
Q Consensus        93 g~id~li~~ag~  104 (280)
                      .++|++|.++|.
T Consensus        99 ~g~Dvvid~vG~  110 (182)
T d1vj0a2          99 RGADFILEATGD  110 (182)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCceEEeecCCc
Confidence            259999999975

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=8.5e-06  Score=62.27  Aligned_cols=77  Identities=17%  Similarity=0.136  Sum_probs=57.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      +|++++|+||++++|...++.....|++|+++++++++.+...+ +.  .+ .+  .|.++++-.    +++.+..  ..
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-lG--a~-~v--i~~~~~d~~----~~v~~~t~g~g   97 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AG--AW-QV--INYREEDLV----ERLKEITGGKK   97 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HT--CS-EE--EETTTSCHH----HHHHHHTTTCC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-cC--Ce-EE--EECCCCCHH----HHHHHHhCCCC
Confidence            58999999999999999999999999999999999998766543 33  12 22  255554433    3333333  36


Q ss_pred             ccEEEECCC
Q 023553           95 LDIMVNNAG  103 (280)
Q Consensus        95 id~li~~ag  103 (280)
                      +|+++.+.|
T Consensus        98 ~d~v~d~~g  106 (179)
T d1qora2          98 VRVVYDSVG  106 (179)
T ss_dssp             EEEEEECSC
T ss_pred             eEEEEeCcc
Confidence            899999887

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=0.00012  Score=55.17  Aligned_cols=80  Identities=16%  Similarity=0.324  Sum_probs=56.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   94 (280)
                      +|.+++|.|+ |++|...++.+...|+ +|+++++++++++.. +++.  .+ .++..+-.+..+..   +.+.... .+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~G--a~-~~~~~~~~~~~~~~---~~~~~~~g~g   97 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIG--AD-LVLQISKESPQEIA---RKVEGQLGCK   97 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTT--CS-EEEECSSCCHHHHH---HHHHHHHTSC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHhC--Cc-cccccccccccccc---ccccccCCCC
Confidence            5789999987 9999999999999999 699999998887755 3443  12 23334444555443   3333334 37


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus        98 ~Dvvid~~G~  107 (171)
T d1pl8a2          98 PEVTIECTGA  107 (171)
T ss_dssp             CSEEEECSCC
T ss_pred             ceEEEeccCC
Confidence            9999999984

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.86  E-value=9e-06  Score=62.32  Aligned_cols=77  Identities=21%  Similarity=0.312  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      +|+++||+||++++|...++.....|++|+++.+++++.+.+ ++..  .+ ..+  |..+++-    .+++++..  .+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l-~~~G--a~-~vi--~~~~~~~----~~~v~~~t~~~g   94 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-SRLG--VE-YVG--DSRSVDF----ADEILELTDGYG   94 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HTTC--CS-EEE--ETTCSTH----HHHHHHHTTTCC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc-cccc--cc-ccc--cCCccCH----HHHHHHHhCCCC
Confidence            589999999999999999999989999999999988765443 3332  22 222  4444432    34444443  36


Q ss_pred             ccEEEECCC
Q 023553           95 LDIMVNNAG  103 (280)
Q Consensus        95 id~li~~ag  103 (280)
                      +|+++.++|
T Consensus        95 ~d~v~d~~g  103 (183)
T d1pqwa_          95 VDVVLNSLA  103 (183)
T ss_dssp             EEEEEECCC
T ss_pred             EEEEEeccc
Confidence            999999987

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.81  E-value=2.8e-05  Score=58.91  Aligned_cols=77  Identities=10%  Similarity=0.101  Sum_probs=58.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .+++||.|+|.|+ ||.+++++..|.+.|++|.++.|+.++.+++.+.......+...  +..+.            ...
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~--~~~~~------------~~~   78 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQAL--SMDEL------------EGH   78 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEEC--CSGGG------------TTC
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccc--ccccc------------ccc
Confidence            4678999999997 78899999999999999999999999988888776544443333  22211            113


Q ss_pred             CccEEEECCCCC
Q 023553           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~id~li~~ag~~  105 (280)
                      +.|++||+....
T Consensus        79 ~~dliIN~Tp~G   90 (170)
T d1nyta1          79 EFDLIINATSSG   90 (170)
T ss_dssp             CCSEEEECCSCG
T ss_pred             ccceeecccccC
Confidence            789999997554

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.74  E-value=3.5e-05  Score=50.09  Aligned_cols=43  Identities=23%  Similarity=0.403  Sum_probs=38.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   58 (280)
                      .++++++|+||++|+|...++.+...|++|+.+.+++++.+-+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3688999999999999999998888999999999998876654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.71  E-value=6.9e-05  Score=56.76  Aligned_cols=77  Identities=12%  Similarity=0.130  Sum_probs=60.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++++|.++|.|+ ||.+++++..|.+.+.+|.++.|+.++.+.+.+.++....+.....|..+              ..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~--------------~~   78 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIP--------------LQ   78 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC--------------CS
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcccc--------------cc
Confidence            4678999999987 66799999999998889999999999999888888755566665554221              24


Q ss_pred             CccEEEECCCCC
Q 023553           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~id~li~~ag~~  105 (280)
                      ..|++||+....
T Consensus        79 ~~diiIN~tp~g   90 (171)
T d1p77a1          79 TYDLVINATSAG   90 (171)
T ss_dssp             CCSEEEECCCC-
T ss_pred             ccceeeeccccc
Confidence            889999998754

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=0.00016  Score=54.31  Aligned_cols=76  Identities=18%  Similarity=0.360  Sum_probs=54.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ..|.+|+|.|+ |++|...++.+...|++++++++++++.+. .+++..  + .+  .|..+++...       ...+++
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~lGa--d-~~--i~~~~~~~~~-------~~~~~~   94 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKALGA--D-EV--VNSRNADEMA-------AHLKSF   94 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHTC--S-EE--EETTCHHHHH-------TTTTCE
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-HhccCC--c-EE--EECchhhHHH-------HhcCCC
Confidence            46899999986 899999998888899999999998887653 455542  2 22  3555554322       122489


Q ss_pred             cEEEECCCCC
Q 023553           96 DIMVNNAGIS  105 (280)
Q Consensus        96 d~li~~ag~~  105 (280)
                      |++|.++|..
T Consensus        95 D~vid~~g~~  104 (168)
T d1uufa2          95 DFILNTVAAP  104 (168)
T ss_dssp             EEEEECCSSC
T ss_pred             ceeeeeeecc
Confidence            9999999854

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.62  E-value=0.00012  Score=52.73  Aligned_cols=72  Identities=15%  Similarity=0.320  Sum_probs=57.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      +++|.|+ |.+|+.+++.|.+.|+.|++++.+++..+++.+..    ...++..|.++++.++++      ...+.|.++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~----~~~vi~Gd~~~~~~l~~~------~i~~a~~vv   70 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI----DALVINGDCTKIKTLEDA------GIEDADMYI   70 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHHHHT------TTTTCSEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh----hhhhccCcccchhhhhhc------Chhhhhhhc
Confidence            6889997 99999999999999999999999999888765543    356788999999865433      113677777


Q ss_pred             ECC
Q 023553          100 NNA  102 (280)
Q Consensus       100 ~~a  102 (280)
                      ...
T Consensus        71 ~~t   73 (132)
T d1lssa_          71 AVT   73 (132)
T ss_dssp             ECC
T ss_pred             ccC
Confidence            653

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.57  E-value=4.6e-05  Score=57.92  Aligned_cols=78  Identities=13%  Similarity=0.088  Sum_probs=53.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--   92 (280)
                      .+|.+|+|.|+ |++|...++.+...|+ +|+++++++++++.. +.+..   ..++  |..+++.    .+++.+..  
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~lGa---~~~i--~~~~~~~----~~~v~~~t~g   94 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFYGA---TDIL--NYKNGHI----EDQVMKLTNG   94 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHHTC---SEEE--CGGGSCH----HHHHHHHTTT
T ss_pred             CCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-HhhCc---cccc--cccchhH----HHHHHHHhhc
Confidence            36889999986 8999999999999998 589999988876655 34431   1222  3333322    23333333  


Q ss_pred             CCccEEEECCCC
Q 023553           93 GTLDIMVNNAGI  104 (280)
Q Consensus        93 g~id~li~~ag~  104 (280)
                      ..+|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            259999999985

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.51  E-value=0.0001  Score=55.71  Aligned_cols=75  Identities=19%  Similarity=0.285  Sum_probs=53.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .+|++++|+||+|++|...++.....|++|+.+++++++.+... ++..  +. ++  |..+.      .+++. ..+++
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa--~~-~i--~~~~~------~~~~~-~~~g~   92 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGA--EE-AA--TYAEV------PERAK-AWGGL   92 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTC--SE-EE--EGGGH------HHHHH-HTTSE
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-cccc--ce-ee--ehhhh------hhhhh-ccccc
Confidence            47999999999999999999988889999999999887766543 3331  21 22  33322      12222 23579


Q ss_pred             cEEEECCC
Q 023553           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |++|.+.|
T Consensus        93 D~v~d~~G  100 (171)
T d1iz0a2          93 DLVLEVRG  100 (171)
T ss_dssp             EEEEECSC
T ss_pred             cccccccc
Confidence            99999765

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=0.00029  Score=55.57  Aligned_cols=81  Identities=17%  Similarity=0.163  Sum_probs=57.3

Q ss_pred             cccCCcEEEEEcC----------------CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC
Q 023553           14 QRLVGRVALITGG----------------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK   77 (280)
Q Consensus        14 ~~l~~k~vlItGa----------------s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~   77 (280)
                      .+|+|+++|||+|                ||..|.+||+.+..+|++|.++......        .....+..+  .+.+
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~--------~~p~~~~~~--~~~t   71 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL--------PTPPFVKRV--DVMT   71 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC--------CCCTTEEEE--ECCS
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc--------Ccccccccc--eehh
Confidence            4799999999976                3589999999999999999988665431        111234444  3344


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEECCCCCCC
Q 023553           78 EEDVCSAVDLTVEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        78 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~  107 (280)
                      .+++   .+.+.+.+...|++|.+|.+...
T Consensus        72 ~~~m---~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          72 ALEM---EAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHH---HHHHHHHGGGCSEEEECCBCCSE
T ss_pred             hHHH---HHHHHhhhccceeEeeeechhhh
Confidence            5544   44444555688999999998754

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=0.00016  Score=55.37  Aligned_cols=104  Identities=14%  Similarity=0.114  Sum_probs=64.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEE-EEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi-~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +++|||+||+||+|...++.....|++++ .+++++++...+.+.+..  + .++  |..+++. .+.++++..  .++|
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga--d-~vi--~~~~~~~-~~~~~~~~~--~GvD  102 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF--D-AAV--NYKTGNV-AEQLREACP--GGVD  102 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC--S-EEE--ETTSSCH-HHHHHHHCT--TCEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc--e-EEe--eccchhH-HHHHHHHhc--cCce
Confidence            48999999999999999999888999754 467777777766666542  2 222  4443332 222333221  3799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA  159 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~  159 (280)
                      +++.+.|-  +                          ..+..++.+  +.+|+++.+++.++.
T Consensus       103 vv~D~vGg--~--------------------------~~~~~~~~l--~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         103 VYFDNVGG--D--------------------------ISNTVISQM--NENSHIILCGQISQY  135 (187)
T ss_dssp             EEEESSCH--H--------------------------HHHHHHTTE--EEEEEEEEC------
T ss_pred             EEEecCCc--h--------------------------hHHHHhhhc--cccccEEEecccccc
Confidence            99999972  1                          133455555  446999998776653

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.41  E-value=0.00016  Score=54.37  Aligned_cols=79  Identities=13%  Similarity=0.229  Sum_probs=54.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--   92 (280)
                      -++.+++|.|+++++|..+++.+...|+ +|+++++++++.+...+ +.  .+ ..+  |.++++..+    ++.+..  
T Consensus        26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~G--a~-~~i--~~~~~~~~~----~~~~~~~~   95 (170)
T d1jvba2          26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-AG--AD-YVI--NASMQDPLA----EIRRITES   95 (170)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-HT--CS-EEE--ETTTSCHHH----HHHHHTTT
T ss_pred             CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-cC--Cc-eee--ccCCcCHHH----HHHHHhhc
Confidence            3688999999999999999999999985 78888888877665543 33  12 223  333333332    333322  


Q ss_pred             CCccEEEECCCC
Q 023553           93 GTLDIMVNNAGI  104 (280)
Q Consensus        93 g~id~li~~ag~  104 (280)
                      +.+|++|.++|.
T Consensus        96 ~~~d~vid~~g~  107 (170)
T d1jvba2          96 KGVDAVIDLNNS  107 (170)
T ss_dssp             SCEEEEEESCCC
T ss_pred             ccchhhhccccc
Confidence            369999999874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.39  E-value=0.00051  Score=47.92  Aligned_cols=42  Identities=29%  Similarity=0.465  Sum_probs=37.1

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        11 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      |...+++||+++|.|++. +|..-++.|.+.|++|++++....
T Consensus         5 Pi~l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           5 PIFCQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EEEECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             ceEEEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCC
Confidence            466789999999999876 999999999999999999887643

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.32  E-value=0.00021  Score=51.46  Aligned_cols=73  Identities=18%  Similarity=0.265  Sum_probs=54.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      |.++|.|+ |-+|+.+++.|.+.|+.|++++.+++..+++.+    . ....+.+|.++++.+.++      .....|.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~----~-~~~~~~gd~~~~~~l~~a------~i~~a~~v   68 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----Y-ATHAVIANATEENELLSL------GIRNFEYV   68 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT----T-CSEEEECCTTCTTHHHHH------TGGGCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH----h-CCcceeeecccchhhhcc------CCccccEE
Confidence            56777866 789999999999999999999999988766532    2 234567899998765432      11367888


Q ss_pred             EECCC
Q 023553           99 VNNAG  103 (280)
Q Consensus        99 i~~ag  103 (280)
                      |...+
T Consensus        69 i~~~~   73 (134)
T d2hmva1          69 IVAIG   73 (134)
T ss_dssp             EECCC
T ss_pred             EEEcC
Confidence            77764

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.31  E-value=0.0011  Score=49.83  Aligned_cols=78  Identities=18%  Similarity=0.246  Sum_probs=52.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEE-EecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh-C
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   93 (280)
                      .+|.+++|.|+ |++|...++.+...|+.+++ +++++++++.. +++..   ..++  |..+++.    .+++++.. +
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~Ga---~~~i--~~~~~~~----~~~i~~~t~g   95 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGA---THVI--NSKTQDP----VAAIKEITDG   95 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTC---SEEE--ETTTSCH----HHHHHHHTTS
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHcCC---eEEE--eCCCcCH----HHHHHHHcCC
Confidence            36889999987 89999999999899997655 56666665554 44431   2233  3333322    33343333 5


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|++|.+.|.
T Consensus        96 g~D~vid~~G~  106 (174)
T d1f8fa2          96 GVNFALESTGS  106 (174)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEEcCCc
Confidence            79999999985

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.23  E-value=0.00021  Score=53.71  Aligned_cols=101  Identities=21%  Similarity=0.273  Sum_probs=67.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh--CC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~   94 (280)
                      ++.+|||+||+||+|...++.....|++|+.+.+++++.+.+.+ +.  .+.. +  |   .++   ...+.....  ++
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-lG--ad~v-i--~---~~~---~~~~~~~~~~~~g   90 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-LG--ASEV-I--S---RED---VYDGTLKALSKQQ   90 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-HT--CSEE-E--E---HHH---HCSSCCCSSCCCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-hc--ccce-E--e---ccc---hhchhhhcccCCC
Confidence            57789999999999999998888889999999999888776544 33  1221 2  1   111   111111111  47


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccccc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA  159 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~  159 (280)
                      +|++|.+.|-.                            .+...+..+  +..|+++.++...+.
T Consensus        91 vd~vid~vgg~----------------------------~~~~~~~~l--~~~G~iv~~G~~~g~  125 (167)
T d1tt7a2          91 WQGAVDPVGGK----------------------------QLASLLSKI--QYGGSVAVSGLTGGG  125 (167)
T ss_dssp             EEEEEESCCTH----------------------------HHHHHHTTE--EEEEEEEECCCSSCS
T ss_pred             ceEEEecCcHH----------------------------HHHHHHHHh--ccCceEEEeeccCCC
Confidence            99999998731                            133455555  346899998877664

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.16  E-value=0.00034  Score=53.04  Aligned_cols=43  Identities=23%  Similarity=0.399  Sum_probs=38.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC   59 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   59 (280)
                      .++++||+||+||+|...++.....|++|+.+++++++.+.+.
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~   73 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH
Confidence            4568999999999999999999999999999999998876553

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.13  E-value=0.0027  Score=46.27  Aligned_cols=112  Identities=14%  Similarity=0.183  Sum_probs=63.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhC----CCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLG----GEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+.+++.|.|+ |.+|..+|..|+..|  ..|++++++++..+.....+.    ..........|.   ++         
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~---------   69 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD---------   69 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH---------
Confidence            35678888896 999999999999988  469999999876544332221    122333344443   21         


Q ss_pred             HHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEc
Q 023553           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISIC  154 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~is  154 (280)
                        ...-|++|..||....+     ..   +-.+.+..|+.-    ++.+.+.+.+. .++.++++|
T Consensus        70 --~~~adivvitag~~~~~-----g~---~r~~l~~~N~~i----~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          70 --CKDADLVVITAGAPQKP-----GE---SRLDLVNKNLNI----LSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             --GTTCSEEEECCCC------------------CHHHHHHH----HHHHHHHHHHTTCCSEEEECS
T ss_pred             --hccccEEEEecccccCC-----CC---CHHHHHHHHHHH----HHHHHHHHhhcCCCcEEEEeC
Confidence              23789999999975431     11   223344455433    44444444433 345555544

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.13  E-value=0.00063  Score=51.26  Aligned_cols=81  Identities=16%  Similarity=0.201  Sum_probs=53.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+|.+|+|.|+ +|+|...+..+...|+ .|+++++++++.+.. +++.  ....+...|-.  +.+.+..+...  .++
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a-~~~G--a~~~i~~~~~~--~~~~~~~~~~~--~~G   98 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVG--ATECVNPQDYK--KPIQEVLTEMS--NGG   98 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTT--CSEEECGGGCS--SCHHHHHHHHT--TSC
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH-HHhC--CeeEEecCCch--hHHHHHHHHHh--cCC
Confidence            37899999999 6899999999999986 688888888887654 3332  12122112221  22222233221  258


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.+.|.
T Consensus        99 ~D~vid~~G~  108 (176)
T d2jhfa2          99 VDFSFEVIGR  108 (176)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEecCCc
Confidence            9999999985

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.10  E-value=0.00026  Score=47.66  Aligned_cols=76  Identities=20%  Similarity=0.200  Sum_probs=51.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .+++||+++|.|. +..|+++|+.|.++|++|++.+.+.....  .+.+.....  +...+. +.+.    +       .
T Consensus         1 ~~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~~~~~~--~~~~~~-~~~~----~-------~   63 (93)
T d2jfga1           1 ADYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKLPEAVE--RHTGSL-NDEW----L-------M   63 (93)
T ss_dssp             CCCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGSCTTSC--EEESBC-CHHH----H-------H
T ss_pred             CCcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHHhhccc--eeeccc-chhh----h-------c
Confidence            3689999999998 55799999999999999999998654221  122222222  222222 2211    1       2


Q ss_pred             CccEEEECCCCCC
Q 023553           94 TLDIMVNNAGISG  106 (280)
Q Consensus        94 ~id~li~~ag~~~  106 (280)
                      .+|.+|...|+..
T Consensus        64 ~~d~vi~SPGi~~   76 (93)
T d2jfga1          64 AADLIVASPGIAL   76 (93)
T ss_dssp             HCSEEEECTTSCT
T ss_pred             cCCEEEECCCCCC
Confidence            7899999999853

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.06  E-value=0.0029  Score=46.88  Aligned_cols=77  Identities=21%  Similarity=0.277  Sum_probs=51.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .+|.+++|.|+ |++|...++.+...|++|+++++++++++... ++.  .+ .++  |.++++..    +.+.+..++.
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~G--a~-~~i--~~~~~~~~----~~~~~~~~g~   94 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLG--AS-LTV--NARQEDPV----EAIQRDIGGA   94 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTT--CS-EEE--ETTTSCHH----HHHHHHHSSE
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-ccC--cc-ccc--cccchhHH----HHHHHhhcCC
Confidence            36889999886 99999999988888999999999988876543 343  12 222  33443332    2333334556


Q ss_pred             cEEEECCC
Q 023553           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |.+|.+++
T Consensus        95 ~~~i~~~~  102 (166)
T d1llua2          95 HGVLVTAV  102 (166)
T ss_dssp             EEEEECCS
T ss_pred             cccccccc
Confidence            66666554

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.06  E-value=0.00071  Score=50.86  Aligned_cols=80  Identities=15%  Similarity=0.144  Sum_probs=50.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   93 (280)
                      .+|.+|+|.|+ +|+|...++.+...|+. |+++++++++++ ..+++..  + .++  |..+ .+.+.+.++...  -+
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~lGa--~-~~i--~~~~~~~~~~~~~~~~~--~~   97 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEFGA--T-ECI--NPQDFSKPIQEVLIEMT--DG   97 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHHTC--S-EEE--CGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHhCC--c-EEE--eCCchhhHHHHHHHHHc--CC
Confidence            46899999998 59999999999999976 555666666654 4455542  1 122  2221 222332233221  24


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|++|.+.|.
T Consensus        98 g~D~vid~~G~  108 (176)
T d2fzwa2          98 GVDYSFECIGN  108 (176)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEeeecCCC
Confidence            79999999974

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.01  E-value=0.00086  Score=50.64  Aligned_cols=80  Identities=13%  Similarity=0.168  Sum_probs=53.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHH-HHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED-VCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g   93 (280)
                      .+|.+++|.|+ +|+|...++.+...|+ +|+++++++++++...+ +..  +. ++  |..+.+. .....+..  .-+
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~GA--~~-~i--n~~~~~~~~~~~~~~~--~g~   98 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGA--TE-CI--SPKDSTKPISEVLSEM--TGN   98 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-HTC--SE-EE--CGGGCSSCHHHHHHHH--HTS
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-cCC--cE-EE--CccccchHHHHHHHHh--ccc
Confidence            46899999986 8999999999999996 69999999998875544 331  22 22  2222211 11112211  124


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|++|.+.|.
T Consensus        99 G~d~vi~~~g~  109 (176)
T d1d1ta2          99 NVGYTFEVIGH  109 (176)
T ss_dssp             CCCEEEECSCC
T ss_pred             cceEEEEeCCc
Confidence            79999999985

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.028  Score=40.52  Aligned_cols=113  Identities=19%  Similarity=0.210  Sum_probs=65.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc---CCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           20 VALITGGATGIGESTVRLFHKH---GAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~---g~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ++.|+|++|.+|.++|..|+.+   ...+++++..+....+..+..+..  ..... ..+-.+.+.+           ..
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~~~-----------~~   69 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG-FSGEDATPAL-----------EG   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEE-ECSSCCHHHH-----------TT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcE-EEcCCCcccc-----------CC
Confidence            6789999999999999988753   467999998654333333333322  22222 2233334332           27


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                      -|++|..||....+     ..+..   +.++.|..-.-.+.+.+.++   ..++.++.+|.
T Consensus        70 aDvvvitaG~~~k~-----g~~R~---dl~~~N~~i~~~v~~~i~~~---~p~aivivvtN  119 (145)
T d2cmda1          70 ADVVLISAGVRRKP-----GMDRS---DLFNVNAGIVKNLVQQVAKT---CPKACIGIITN  119 (145)
T ss_dssp             CSEEEECCSCCCCT-----TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred             CCEEEECCCccCCC-----Ccchh---hHHHHHHHHHHHHHHHHHhh---CCCcEEEEccC
Confidence            89999999975432     23332   33455544444445555443   34566666654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.87  E-value=0.00087  Score=49.50  Aligned_cols=79  Identities=15%  Similarity=0.162  Sum_probs=50.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCC-----CCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGG-----EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      -+.+++.|.|+ |.+|..++..++..+. .+++++.+++..+.....+..     ....... .+ .+.++         
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~~-~~~~~---------   72 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-AE-YSYEA---------   72 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-EE-CSHHH---------
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-cc-Cchhh---------
Confidence            35677778897 9999999999998884 699999887655544333211     1111111 11 12221         


Q ss_pred             HHhCCccEEEECCCCCCC
Q 023553           90 EKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        90 ~~~g~id~li~~ag~~~~  107 (280)
                       ....-|++|..+|....
T Consensus        73 -~~~~adiVvitag~~~~   89 (154)
T d1pzga1          73 -ALTGADCVIVTAGLTKV   89 (154)
T ss_dssp             -HHTTCSEEEECCSCSSC
T ss_pred             -hhcCCCeEEEecccccC
Confidence             11388999999998654

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.86  E-value=0.017  Score=41.90  Aligned_cols=77  Identities=18%  Similarity=0.207  Sum_probs=52.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC----CC-CCeEEEecCCCCHHHHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG----GE-PDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~----~~-~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      -.++++.|.|+ |.+|..+|..++..|.  .+++++++++..+.....+.    .. ..+.+...|.   ++        
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~--------   71 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD--------   71 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG--------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH--------
Confidence            45778888897 9999999999999875  59999998876544333331    11 2233333332   21        


Q ss_pred             HHHhCCccEEEECCCCCCC
Q 023553           89 VEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~  107 (280)
                         ...-|++|..+|....
T Consensus        72 ---l~daDvvvitag~~~~   87 (148)
T d1ldna1          72 ---CRDADLVVICAGANQK   87 (148)
T ss_dssp             ---TTTCSEEEECCSCCCC
T ss_pred             ---hccceeEEEecccccc
Confidence               2378999999997543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.79  E-value=0.002  Score=48.44  Aligned_cols=81  Identities=19%  Similarity=0.178  Sum_probs=52.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+|.+|+|.|+ |+||...++.+...|+. |+++++++++++. .+++..   ..++...-.+ +.........  .-++
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~-a~~~Ga---~~~i~~~~~~-~~~~~~~~~~--~~~G   98 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPK-AKALGA---TDCLNPRELD-KPVQDVITEL--TAGG   98 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHTTC---SEEECGGGCS-SCHHHHHHHH--HTSC
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHH-HHHhCC---CcccCCccch-hhhhhhHhhh--hcCC
Confidence            36889999975 99999999999999995 7777888776544 444432   1222211111 1222222222  2258


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus        99 ~d~vie~~G~  108 (174)
T d1e3ia2          99 VDYSLDCAGT  108 (174)
T ss_dssp             BSEEEESSCC
T ss_pred             CcEEEEeccc
Confidence            9999999985

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.73  E-value=0.0048  Score=44.98  Aligned_cols=84  Identities=12%  Similarity=0.107  Sum_probs=56.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++..-|++.|.||.|-+|..+++.|.++|+.|.+.+|+.....+....   ..+......++   ..+...+.++.....
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~---~~~~v~~~~~~---~~~~~v~~~~~~~~~   78 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA---NADVVIVSVPI---NLTLETIERLKPYLT   78 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT---TCSEEEECSCG---GGHHHHHHHHGGGCC
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh---hccccccccch---hhheeeeeccccccc
Confidence            345678999999999999999999999999999999987765543321   23444444443   344455565554433


Q ss_pred             CccEEEECCC
Q 023553           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~id~li~~ag  103 (280)
                      +=.+++..+.
T Consensus        79 ~~~iiiD~~S   88 (152)
T d2pv7a2          79 ENMLLADLTS   88 (152)
T ss_dssp             TTSEEEECCS
T ss_pred             CCceEEEecc
Confidence            3334555543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.72  E-value=0.0015  Score=48.75  Aligned_cols=78  Identities=19%  Similarity=0.239  Sum_probs=53.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .+|.+++|.|+ |++|...++.+...|++|+++++++++++.. +++.  .+..+...+-.+   .      .++..+..
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~lG--a~~~i~~~~~~~---~------~~~~~~~~   92 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKMG--ADHYIATLEEGD---W------GEKYFDTF   92 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHT--CSEEEEGGGTSC---H------HHHSCSCE
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hccC--CcEEeeccchHH---H------HHhhhccc
Confidence            36899999987 8999999988888899999999998887765 4443  222222122111   1      11233589


Q ss_pred             cEEEECCCCCC
Q 023553           96 DIMVNNAGISG  106 (280)
Q Consensus        96 d~li~~ag~~~  106 (280)
                      |.++.+.+...
T Consensus        93 d~vi~~~~~~~  103 (168)
T d1piwa2          93 DLIVVCASSLT  103 (168)
T ss_dssp             EEEEECCSCST
T ss_pred             ceEEEEecCCc
Confidence            99999887543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.68  E-value=0.028  Score=40.48  Aligned_cols=114  Identities=18%  Similarity=0.178  Sum_probs=64.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCe-EEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDT-FFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ++.|+||+|.+|..+|..|+..|.  .+++++.++.+.+ ..+..+..... ......-.+..+          ....-|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~-a~Dl~~~~~~~~~~~~~~~~~~~~----------~~~~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-AADLSHIETRATVKGYLGPEQLPD----------CLKGCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-HHHHTTSSSSCEEEEEESGGGHHH----------HHTTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh-hHHHhhhhhhcCCCeEEcCCChHH----------HhCCCC
Confidence            688999999999999999998875  4888888764332 23333222111 111111112111          123899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                      ++|..||....+     ..+..   +.++.|..-.-.+++.+.++   ..++.++.+|.
T Consensus        71 ivVitag~~~~~-----g~sR~---~ll~~N~~i~~~i~~~i~~~---~p~~iiivvtN  118 (144)
T d1mlda1          71 VVVIPAGVPRKP-----GMTRD---DLFNTNATIVATLTAACAQH---CPDAMICIISN  118 (144)
T ss_dssp             EEEECCSCCCCT-----TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred             EEEECCCcCCCC-----CCCcc---hHHHHHHHHHHHHHHHHHhc---CCCeEEEEecC
Confidence            999999975321     23332   23555555444444554443   33566666554

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.58  E-value=0.0036  Score=46.70  Aligned_cols=79  Identities=23%  Similarity=0.313  Sum_probs=50.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      ..|.+++|.|+ |++|...++.+...|+. |+++++++++++... .+.  .. .++  |..+ +...+..+...  -.+
T Consensus        31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~~g--a~-~~i--~~~~-~~~~~~~~~~~--~~g  100 (172)
T d1h2ba2          31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLG--AD-HVV--DARR-DPVKQVMELTR--GRG  100 (172)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTT--CS-EEE--ETTS-CHHHHHHHHTT--TCC
T ss_pred             CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-hcc--cc-eee--cCcc-cHHHHHHHhhC--CCC
Confidence            35889999986 99999999999888875 666777777665544 332  12 233  2222 23322222111  136


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       101 ~d~vid~~g~  110 (172)
T d1h2ba2         101 VNVAMDFVGS  110 (172)
T ss_dssp             EEEEEESSCC
T ss_pred             ceEEEEecCc
Confidence            9999999985

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.58  E-value=0.0036  Score=47.92  Aligned_cols=117  Identities=11%  Similarity=0.015  Sum_probs=67.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      -.|.+|+|.|+ +++|...+......|+ .|+++++++++++... .+.   .-.++  |-.+.+-..++.+ +. .-..
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~G---a~~~~--~~~~~~~~~~i~~-~t-~g~g   94 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQG---FEIAD--LSLDTPLHEQIAA-LL-GEPE   94 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTT---CEEEE--TTSSSCHHHHHHH-HH-SSSC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hcc---ccEEE--eCCCcCHHHHHHH-Hh-CCCC
Confidence            36899999986 8999888888878887 5888888888776543 332   11222  3333322222222 21 1137


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                      +|++|.+.|..... ....           ..+..+.-..++..+..+  +..|+++.++-
T Consensus        95 ~D~vid~vG~~~~~-~~~~-----------~~~~~~~~~~l~~~~~~~--r~gG~v~~~G~  141 (195)
T d1kola2          95 VDCAVDAVGFEARG-HGHE-----------GAKHEAPATVLNSLMQVT--RVAGKIGIPGL  141 (195)
T ss_dssp             EEEEEECCCTTCBC-SSTT-----------GGGSBCTTHHHHHHHHHE--EEEEEEEECSC
T ss_pred             cEEEEECccccccC-Cccc-----------ceeecCcHHHHHHHHHHH--hcCCEEEEeee
Confidence            99999999853221 0000           011222223355555555  44689998764

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.53  E-value=0.02  Score=41.78  Aligned_cols=115  Identities=12%  Similarity=0.025  Sum_probs=62.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC---------eEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGA---------KVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~---------~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      -+|.|+||+|.+|..++..|+..+.         .++...++.+..+.....+...  .....+...-.+.+        
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------   76 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV--------   76 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH--------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh--------
Confidence            3899999999999999999998653         1222344445554444443322  22333322222222        


Q ss_pred             HHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEc
Q 023553           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~is  154 (280)
                         .+..-|++|..+|....     ...+.+++   ++.|+.-.-.+.+.+..+-  ...+.++.+|
T Consensus        77 ---~~~~advViitaG~~~~-----pg~~r~dl---~~~N~~i~~~~~~~i~k~a--~~~~~vivvs  130 (154)
T d1y7ta1          77 ---AFKDADYALLVGAAPRK-----AGMERRDL---LQVNGKIFTEQGRALAEVA--KKDVKVLVVG  130 (154)
T ss_dssp             ---HTTTCSEEEECCCCCCC-----TTCCHHHH---HHHHHHHHHHHHHHHHHHS--CTTCEEEECS
T ss_pred             ---hcccccEEEeecCcCCC-----CCCcHHHH---HHHHHHHHHHHHHHHHHhC--CCCcEEEEec
Confidence               22489999999998543     23454443   4445444444444443331  1235565554

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.48  E-value=0.014  Score=42.96  Aligned_cols=80  Identities=11%  Similarity=0.079  Sum_probs=54.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh-----------CCCCCeEEEecCCCCHHHHHHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL-----------GGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++.|.|. |-+|.++|+.|.+.|+.|++.+|+++..++..+.-           -...++.++..   ..+.+.++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            3556655 99999999999999999999999988766544321           01244555433   356777888888


Q ss_pred             HHHhCCccEEEECCC
Q 023553           89 VEKFGTLDIMVNNAG  103 (280)
Q Consensus        89 ~~~~g~id~li~~ag  103 (280)
                      .....+=.+++..++
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            665544445555543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.47  E-value=0.0032  Score=47.20  Aligned_cols=80  Identities=19%  Similarity=0.196  Sum_probs=52.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHH-HHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED-VCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g   93 (280)
                      .+|.+|+|.|+ +|+|...++.+...|+ +|+++++++++++... ++.   ...++  |.++.+. +.+.....  .-+
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lG---a~~~i--~~~~~d~~~~~~~~~~--~~~   96 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELG---ATECL--NPKDYDKPIYEVICEK--TNG   96 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTT---CSEEE--CGGGCSSCHHHHHHHH--TTS
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcC---CcEEE--cCCCchhHHHHHHHHh--cCC
Confidence            47899999986 8999999999999997 5888888888876653 333   12222  2222211 11112211  114


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus        97 G~d~vid~~g~  107 (174)
T d1p0fa2          97 GVDYAVECAGR  107 (174)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEEcCCC
Confidence            79999999874

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.40  E-value=0.018  Score=41.61  Aligned_cols=73  Identities=14%  Similarity=0.126  Sum_probs=49.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC----C-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG----G-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |++.|.|+ |.+|..+|..|+.+|.  .+++++.++++.+.....+.    . .........|   .+++          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHHh----------
Confidence            67788895 8999999999999874  69999998876544333221    1 1222333333   2222          


Q ss_pred             hCCccEEEECCCCCC
Q 023553           92 FGTLDIMVNNAGISG  106 (280)
Q Consensus        92 ~g~id~li~~ag~~~  106 (280)
                       ..-|++|..||...
T Consensus        68 -~~adiVVitaG~~~   81 (146)
T d1hyha1          68 -ADADVVISTLGNIK   81 (146)
T ss_dssp             -TTCSEEEECCSCGG
T ss_pred             -ccccEEEEeccccc
Confidence             37899999999754

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.37  E-value=0.039  Score=39.72  Aligned_cols=34  Identities=18%  Similarity=0.279  Sum_probs=30.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcc
Q 023553           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDN   53 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~   53 (280)
                      ++.|.||+|.+|..+|..++..+.  .++++++++.
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS   37 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence            589999999999999999999983  6999998753

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.33  E-value=0.0086  Score=44.14  Aligned_cols=76  Identities=26%  Similarity=0.334  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|.+++|.|+ |++|...++.+...|++|+++++++++++.. +.+..  +. +  .|-++.+.    .+.+.+.....|
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~-k~~Ga--~~-~--~~~~~~~~----~~~~~~~~~~~~   95 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGA--DL-V--VNPLKEDA----AKFMKEKVGGVH   95 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTC--SE-E--ECTTTSCH----HHHHHHHHSSEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh-hhcCc--ce-e--cccccchh----hhhcccccCCCc
Confidence            6889999875 9999999998889999999999998887655 33431  21 1  23333322    223333335666


Q ss_pred             EEEECCC
Q 023553           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      .+|.+++
T Consensus        96 ~~v~~~~  102 (168)
T d1rjwa2          96 AAVVTAV  102 (168)
T ss_dssp             EEEESSC
T ss_pred             eEEeecC
Confidence            6666665

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.31  E-value=0.0027  Score=47.38  Aligned_cols=46  Identities=22%  Similarity=0.343  Sum_probs=40.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLG   63 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~   63 (280)
                      ++|.|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+...
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~   62 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG   62 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhh
Confidence            6788999987 8999999999999997 69999999998888776654

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.29  E-value=0.033  Score=41.48  Aligned_cols=115  Identities=11%  Similarity=0.025  Sum_probs=62.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc---CC----eEEEEecCc--chHHHHHHHhCCC---CCeEEEecCCCCHHHHHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKH---GA----KVCIADVQD--NLGQQVCQSLGGE---PDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~---g~----~Vi~~~r~~--~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~   84 (280)
                      +.-+|.|+||+|.||..++..|++.   |.    .+.+.+...  ..++...-++...   .......+  ++..     
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~--~~~~-----   95 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG--IDPY-----   95 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--SCHH-----
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc--ccch-----
Confidence            4558999999999999999999974   32    344455544  2333333333221   11122222  2322     


Q ss_pred             HHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEE
Q 023553           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISI  153 (280)
Q Consensus        85 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~i  153 (280)
                           +.+...|++|..+|....     ...+.++   .++.|..-.-.+.+.+.++=  .+..+|+.+
T Consensus        96 -----~~~~~aDvVvi~ag~~rk-----pg~tR~D---ll~~N~~I~k~~~~~i~~~a--~~~~~vlvv  149 (175)
T d7mdha1          96 -----EVFEDVDWALLIGAKPRG-----PGMERAA---LLDINGQIFADQGKALNAVA--SKNVKVLVV  149 (175)
T ss_dssp             -----HHTTTCSEEEECCCCCCC-----TTCCHHH---HHHHHHHHHHHHHHHHHHHS--CTTCEEEEC
T ss_pred             -----hhccCCceEEEeeccCCC-----CCCcHHH---HHHHHHHHHHHHHHHHHhhC--CCCcEEEEe
Confidence                 123589999999998543     2345444   45555444444444444431  123455554

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.0036  Score=47.79  Aligned_cols=42  Identities=14%  Similarity=0.290  Sum_probs=36.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS   61 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~   61 (280)
                      |++.|.|+ |-+|..+|..|+..|+.|++.+++++.+++..+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~   46 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG   46 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhh
Confidence            68899998 7799999999999999999999998876655443

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.26  E-value=0.09  Score=38.38  Aligned_cols=115  Identities=14%  Similarity=0.149  Sum_probs=68.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHh-CC----CCCeEEEecCCCCHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSL-GG----EPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~-~~----~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ..++.+++.|.|+ |.+|..++..++..|.  .+++++.+++..+.....+ +.    .........|   .+++     
T Consensus        16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~~~~-----   86 (160)
T d1i0za1          16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---YSVT-----   86 (160)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---GGGG-----
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---hhhc-----
Confidence            3456778888896 9999999999999986  5999999876654333332 11    1222222233   2221     


Q ss_pred             HHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEcc
Q 023553           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICS  155 (280)
Q Consensus        87 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~isS  155 (280)
                            ..-|++|..||....+     ..+..   +.++.|..    +++.+.+.+.+. .++-++++|-
T Consensus        87 ------~~adiVVitAg~~~~~-----g~tR~---~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          87 ------ANSKIVVVTAGVRQQE-----GESRL---NLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             ------TTCSEEEECCSCCCCT-----TCCGG---GGHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ------ccccEEEEecCCcccc-----CcchH---HHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCC
Confidence                  3789999999975432     22322   23333443    445555555443 3566666553

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.19  E-value=0.011  Score=42.88  Aligned_cols=75  Identities=8%  Similarity=0.049  Sum_probs=55.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   99 (280)
                      .++|.|. +.+|+.+++.|.+.|..|++++.+++......+.... ..+.++..|.++++-+++    +  ...+.|.+|
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~-~~~~vi~Gd~~d~~~L~~----a--~i~~a~~vi   76 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-DNADVIPGDSNDSSVLKK----A--GIDRCRAIL   76 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-TTCEEEESCTTSHHHHHH----H--TTTTCSEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc-CCcEEEEccCcchHHHHH----h--ccccCCEEE
Confidence            4777777 6999999999999999999999988765544444322 356788999999876432    2  123678888


Q ss_pred             ECC
Q 023553          100 NNA  102 (280)
Q Consensus       100 ~~a  102 (280)
                      ...
T Consensus        77 ~~~   79 (153)
T d1id1a_          77 ALS   79 (153)
T ss_dssp             ECS
T ss_pred             Ecc
Confidence            776

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.17  E-value=0.026  Score=40.59  Aligned_cols=109  Identities=15%  Similarity=0.126  Sum_probs=58.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCC-C---CCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGG-E---PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~-~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++.|.|+ |.+|..++..++..+.  .+++++++++..+.....+.. .   ........   +.++           ..
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~-----------~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYSD-----------VK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG-----------GT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHHH-----------hC
Confidence            4556686 9999999999999875  699999988764433333321 1   22222221   2221           24


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEc
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~is  154 (280)
                      .-|++|..||....+     ..+.   .+.++.|..-...+.+.+.++   ..++.++.+|
T Consensus        68 ~adivvitag~~~~~-----~~~r---~~l~~~N~~i~~~i~~~i~~~---~p~ai~ivvt  117 (142)
T d1y6ja1          68 DCDVIVVTAGANRKP-----GETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVS  117 (142)
T ss_dssp             TCSEEEECCCC-----------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECS
T ss_pred             CCceEEEecccccCc-----Ccch---hHHhhHHHHHHHHHHHHhhcc---CCCceEEEec
Confidence            789999999975431     1222   344555554444444444433   3456666554

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.13  E-value=0.0053  Score=47.16  Aligned_cols=44  Identities=25%  Similarity=0.355  Sum_probs=38.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC   59 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   59 (280)
                      +|+||+++|.| .|.+|+.+|+.|.+.|++|++++.+........
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~   67 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV   67 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH
Confidence            69999999997 777999999999999999999998877666543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.07  E-value=0.0053  Score=45.79  Aligned_cols=84  Identities=17%  Similarity=0.165  Sum_probs=53.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .+++||.++|.|-|.=+|+.++..|.++|++|..+.++............- ..........-.++.++....       
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lk~~~~-------   96 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKL-NKHHVEDLGEYSEDLLKKCSL-------   96 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSC-CCCEEEEEEECCHHHHHHHHH-------
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceee-eeeccccccccchhHHhhccc-------
Confidence            479999999999999999999999999999999887653321000000000 001111111123444544444       


Q ss_pred             CccEEEECCCCC
Q 023553           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~id~li~~ag~~  105 (280)
                      ..|++|..+|..
T Consensus        97 ~aDIvIsavG~p  108 (171)
T d1edza1          97 DSDVVITGVPSE  108 (171)
T ss_dssp             HCSEEEECCCCT
T ss_pred             cCCEEEEccCCC
Confidence            789999999864

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.95  E-value=0.0069  Score=45.27  Aligned_cols=43  Identities=12%  Similarity=0.115  Sum_probs=37.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS   61 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~   61 (280)
                      .|++.|.|+ |.+|.++|..|+++|++|.+.+|+++..+...+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            478999998 9999999999999999999999998887766543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.94  E-value=0.0053  Score=46.06  Aligned_cols=47  Identities=15%  Similarity=0.248  Sum_probs=39.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   62 (280)
                      .+++||.|+|.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            4589999999987 578999999998777 8999999998888776654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.91  E-value=0.0035  Score=45.69  Aligned_cols=39  Identities=18%  Similarity=0.355  Sum_probs=34.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~   51 (280)
                      .-..++||++||.|| |.+|..-++.|.+.|++|.+++..
T Consensus         7 l~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           7 LAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             hheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            446689999999999 559999999999999999998754

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.84  E-value=0.048  Score=40.41  Aligned_cols=84  Identities=13%  Similarity=0.095  Sum_probs=58.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC----------------CCeEEEecCCCCHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE----------------PDTFFCHCDVTKEEDVC   82 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~~~   82 (280)
                      +.+-|.|- |-+|..+|+.|++.|++|++.+|++++.+++.+.-...                .....+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            34556665 89999999999999999999999998887765432110                11123333456667777


Q ss_pred             HHHHHHHHHhCCccEEEECCC
Q 023553           83 SAVDLTVEKFGTLDIMVNNAG  103 (280)
Q Consensus        83 ~~~~~~~~~~g~id~li~~ag  103 (280)
                      ...+.+.....+=+++|...-
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence            778877776655566776653

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.75  E-value=0.019  Score=43.14  Aligned_cols=38  Identities=18%  Similarity=0.200  Sum_probs=34.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      .+.||++.|.|.+. ||+.+++.+...|++|+..+|...
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecccc-ccccceeeeecccccccccccccc
Confidence            48999999999876 999999999999999999998754

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.74  E-value=0.01  Score=43.86  Aligned_cols=47  Identities=11%  Similarity=0.097  Sum_probs=40.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   60 (280)
                      .++.||.++|.|-|.-+|+.++..|.++|++|.++.+....+++..+
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~~   79 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE   79 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHHh
Confidence            46899999999999999999999999999999988777665555444

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.71  E-value=0.0078  Score=45.86  Aligned_cols=41  Identities=20%  Similarity=0.160  Sum_probs=35.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      ..++.||++.|.| .|.||+.+|+.+...|++|+..++....
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   84 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSD   84 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCcccc
Confidence            4568999999995 5789999999999999999999887553

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=95.70  E-value=0.19  Score=35.61  Aligned_cols=110  Identities=17%  Similarity=0.191  Sum_probs=63.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHh-CC----CCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSL-GG----EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~-~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++.|+|+ |.+|..++..++..|  ..+++.+.+++..+.....+ +.    .....+...+  +.+.           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------h
Confidence            4667786 899999999999987  46999999887655443232 11    1223333222  2222           2


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEc
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~is  154 (280)
                      ..-|++|..||....+     ..+.   .+.++.|..-...+.+.+.++   ..++.++++|
T Consensus        68 ~dadvvvitag~~~~~-----g~~r---~~l~~~N~~i~~~i~~~i~~~---~p~aivivvt  118 (142)
T d1guza1          68 ANSDIVIITAGLPRKP-----GMTR---EDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVS  118 (142)
T ss_dssp             TTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---CSSCEEEECC
T ss_pred             cCCeEEEEEEecCCCC-----CCch---HHHHHHHHHHHHHHHHHhhcc---CCCeEEEEec
Confidence            3889999999975432     2232   233444444433444444433   3456666553

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.69  E-value=0.19  Score=35.59  Aligned_cols=108  Identities=19%  Similarity=0.177  Sum_probs=63.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhC----CCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLG----GEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++.|.|+ |.+|..++..++..+  ..+++.+.+++..+.....+.    ..........|   .+++           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~-----------~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL-----------K   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG-----------T
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh-----------c
Confidence            4667786 899999999999887  469999998776554333321    11233333333   2221           3


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhccc-CCCceEEEEc
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISIC  154 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~g~iv~is  154 (280)
                      .-|++|..||....     ...+..   +.+..|..    +++.+.+.+.+ ..++.++++|
T Consensus        67 ~adivvitag~~~~-----~g~~r~---dl~~~N~~----I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          67 GSDVVIVAAGVPQK-----PGETRL---QLLGRNAR----VMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             TCSEEEECCCCCCC-----SSCCHH---HHHHHHHH----HHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCEEEEecccccC-----CCcchh---hhhccccc----hHHHHHHHHHhcCCCcEEEEeC
Confidence            78999999997543     123332   23444433    34445555444 3456666554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.69  E-value=0.0056  Score=46.39  Aligned_cols=42  Identities=14%  Similarity=0.169  Sum_probs=35.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS   61 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~   61 (280)
                      |++.|.|+ |-+|..+|..|+..|+.|++.+++++.+++..+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~   46 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAE   46 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhh
Confidence            56888888 7799999999999999999999998876655443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.69  E-value=0.16  Score=36.16  Aligned_cols=109  Identities=17%  Similarity=0.159  Sum_probs=63.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCc--chHH-HHHHH---hCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQD--NLGQ-QVCQS---LGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~--~~~~-~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++.|+|++|.+|..+|..++..+.  .+++.+.+.  +..+ +..+.   ............|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            688999999999999999999875  488888542  2222 12222   12223333333332   22           


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCC-CceEEEEc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISIC  154 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~is  154 (280)
                      ...-|++|..||....+     ..+.   .+.++.|..    +++.+.+.+.+.. ++.++.++
T Consensus        68 ~~~aDiVvitaG~~~~~-----g~~R---~dl~~~N~~----I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQP-----GQTR---IDLAGDNAP----IMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             GTTCSEEEECCCCCCCT-----TCCH---HHHHHHHHH----HHHHHHHHHHTTCSCCEEEECC
T ss_pred             hhhcCEEEEeccccccc-----CCch---hhHHHHHHH----HHHHHHHHHHhcCCCceEEEec
Confidence            23889999999975431     2333   334444443    4455555555443 45555553

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.68  E-value=0.087  Score=38.49  Aligned_cols=82  Identities=12%  Similarity=0.062  Sum_probs=56.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC-------------CCCCeEEEecCCCCHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG-------------GEPDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~~~~~~   83 (280)
                      |+++|.|+ |-+|.++|+.|.+.|+  +|++.+++++.++...+.-.             ...++.++.   ..++.+.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhh
Confidence            56888875 8999999999999986  68889999887776544321             012333332   34677888


Q ss_pred             HHHHHHHHhCCccEEEECCCC
Q 023553           84 AVDLTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        84 ~~~~~~~~~g~id~li~~ag~  104 (280)
                      .++++.....+=.+++..+++
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            888888776555556665554

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.67  E-value=0.0095  Score=44.27  Aligned_cols=46  Identities=17%  Similarity=0.213  Sum_probs=40.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC   59 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   59 (280)
                      .+++||.++|.|-|.-+|+.++..|.++|++|..+.+....+.+..
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~   80 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEV   80 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHHH
Confidence            4689999999999999999999999999999999888766655443

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.64  E-value=0.091  Score=37.50  Aligned_cols=109  Identities=17%  Similarity=0.231  Sum_probs=62.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCC-----CCeEEE-ecCCCCHHHHHHHHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGE-----PDTFFC-HCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |++.|.|+ |.+|..+|..|+..+. ++++++.+++..+.....+...     ....+. ..|..   ++          
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~---~~----------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA---DT----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG---GG----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH---Hh----------
Confidence            56777786 9999999999998875 7999998877655443333111     122222 22222   11          


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISIC  154 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~is  154 (280)
                       ..-|++|..||....+     ..+.   .+.+..|.    .+++.+.+.+.+. .++.++.+|
T Consensus        68 -~~advvvitag~~~~~-----~~~r---~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          68 -ANSDVIVVTSGAPRKP-----GMSR---EDLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             -TTCSEEEECCSCC-----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             -cCCCEEEEeeeccCCc-----Ccch---hHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence             3789999999976431     1222   23344444    3566666666554 355555543

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.60  E-value=0.019  Score=42.54  Aligned_cols=80  Identities=16%  Similarity=0.253  Sum_probs=50.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHH-HHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED-VCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g   93 (280)
                      .+|.+++|.|+ +|+|...+..++..|+ .|+++++++++++... ++.  .+ .++  |..++++ ..+..+...  -+
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~G--Ad-~~i--n~~~~~~~~~~~~~~~~--~~   97 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFG--AT-DFV--NPNDHSEPISQVLSKMT--NG   97 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTT--CC-EEE--CGGGCSSCHHHHHHHHH--TS
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-HcC--Cc-EEE--cCCCcchhHHHHHHhhc--cC
Confidence            47889999985 7788888888888877 5888888888776543 343  11 233  2222221 222222221  14


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ++|++|.+.|.
T Consensus        98 G~d~vid~~G~  108 (175)
T d1cdoa2          98 GVDFSLECVGN  108 (175)
T ss_dssp             CBSEEEECSCC
T ss_pred             CcceeeeecCC
Confidence            89999999984

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.53  E-value=0.19  Score=36.17  Aligned_cols=76  Identities=16%  Similarity=0.233  Sum_probs=48.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCC-----CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGG-----EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++.|.|+ |.+|..++..++..+. ++++++++++..+.....+..     .....+...+  +.++           
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~-----------   68 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDD-----------   68 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGG-----------
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccc-----------
Confidence            356778885 9999999988888774 589999987665544333311     1222222222  2221           


Q ss_pred             hCCccEEEECCCCCCC
Q 023553           92 FGTLDIMVNNAGISGA  107 (280)
Q Consensus        92 ~g~id~li~~ag~~~~  107 (280)
                      ...-|++|..+|....
T Consensus        69 ~~~advvvitag~~~~   84 (150)
T d1t2da1          69 LAGADVVIVTAGFTKA   84 (150)
T ss_dssp             GTTCSEEEECCSCSSC
T ss_pred             cCCCcEEEEecccccC
Confidence            2378999999997654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.41  E-value=0.041  Score=41.79  Aligned_cols=39  Identities=26%  Similarity=0.383  Sum_probs=34.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      .++.||++.|.|- |.||+.+|+.+...|++|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            5689999999985 68999999999999999999987654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.40  E-value=0.017  Score=42.45  Aligned_cols=40  Identities=23%  Similarity=0.459  Sum_probs=35.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      ..+.||+++|.|=+ -+|+.+|+.+...|++|++++.++-.
T Consensus        20 ~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          20 VMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccch
Confidence            45899999999865 79999999999999999999998754

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.37  E-value=0.12  Score=37.62  Aligned_cols=77  Identities=12%  Similarity=0.059  Sum_probs=50.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC----CCC-CeEEEecCCCCHHHHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG----GEP-DTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~----~~~-~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++..++.|.|+ |.+|..+|..|+..|.  .+++++++++..+.....+.    ... .......|.   ++        
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~~--------   84 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---NV--------   84 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---GG--------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---hh--------
Confidence            34456777786 9999999999999875  59999998776554333331    112 222223332   21        


Q ss_pred             HHHhCCccEEEECCCCCCC
Q 023553           89 VEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~  107 (280)
                         ...-|++|..||....
T Consensus        85 ---~~~adivvitag~~~~  100 (159)
T d2ldxa1          85 ---SANSKLVIITAGARMV  100 (159)
T ss_dssp             ---GTTEEEEEECCSCCCC
T ss_pred             ---hccccEEEEecccccC
Confidence               1488999999997543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=95.35  E-value=0.23  Score=35.30  Aligned_cols=110  Identities=13%  Similarity=0.124  Sum_probs=63.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC----CCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG----GEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ++.|.|+ |.+|..+|..++..|.  .+++++.+++..+.....+.    ..........+  +.+++           .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~~~-----------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPEIC-----------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGGGG-----------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHHHh-----------h
Confidence            4666686 9999999999999875  59999999876554322221    11222332222  22221           2


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEc
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~is  154 (280)
                      .-|++|..||....     ...+..   +.+..|..-.-.+.+.+.++   ..++.++.+|
T Consensus        69 daDvVVitaG~~~~-----~g~~R~---dl~~~N~~i~~~i~~~i~~~---~p~ai~ivvt  118 (143)
T d1llda1          69 DADMVVITAGPRQK-----PGQSRL---ELVGATVNILKAIMPNLVKV---APNAIYMLIT  118 (143)
T ss_dssp             TCSEEEECCCCCCC-----TTCCHH---HHHHHHHHHHHHHHHHHHHH---CTTSEEEECC
T ss_pred             CCcEEEEecccccC-----CCCchh---hhhhhhHHHHHHHHHHHHhh---CCCeEEEEeC
Confidence            67999999997543     234443   34555554333334444333   2345665554

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.20  E-value=0.043  Score=41.18  Aligned_cols=41  Identities=20%  Similarity=0.204  Sum_probs=35.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      ..++.||++.|.| .|.||+.+++.+...|++|+..++....
T Consensus        39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            4568999999998 6899999999999999999999887543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.03  E-value=0.057  Score=37.92  Aligned_cols=73  Identities=21%  Similarity=0.348  Sum_probs=55.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEE-EecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      ++.|.|++|..|+.+++.+.+.++.++. ++++...      .+. ..++   ..|+|.++...+.++.+.+.  ++-++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~~-~~DV---vIDFS~p~~~~~~l~~~~~~--~~p~V   69 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------ELD-SPDV---VIDFSSPEALPKTVDLCKKY--RAGLV   69 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------ECS-CCSE---EEECSCGGGHHHHHHHHHHH--TCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hhc-cCCE---EEEecCHHHHHHHHHHHHhc--CCCEE
Confidence            5899999999999999999999998765 4444321      111 2343   35999999999999998877  67788


Q ss_pred             EECCCC
Q 023553           99 VNNAGI  104 (280)
Q Consensus        99 i~~ag~  104 (280)
                      +-..|.
T Consensus        70 iGTTG~   75 (128)
T d1vm6a3          70 LGTTAL   75 (128)
T ss_dssp             ECCCSC
T ss_pred             EEcCCC
Confidence            877774

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.00  E-value=0.011  Score=46.28  Aligned_cols=50  Identities=18%  Similarity=0.316  Sum_probs=41.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG   63 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~   63 (280)
                      ..+|+||+++|-| .|.+|..+|+.|.+.|++|+.++.+............
T Consensus        34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g   83 (230)
T d1leha1          34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG   83 (230)
T ss_dssp             SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcC
Confidence            3468999999987 5678999999999999999999998887776665543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.94  E-value=0.15  Score=37.50  Aligned_cols=82  Identities=16%  Similarity=0.182  Sum_probs=52.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCC-------------------CeEEEecCCCCHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-------------------DTFFCHCDVTKEE   79 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-------------------~~~~~~~D~~~~~   79 (280)
                      |+-+|  |.|-.|..++++|++.|+.|.+.+|++++.+.+.+.-....                   ....+..-+.+..
T Consensus         3 kIGvI--GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (178)
T d1pgja2           3 DVGVV--GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGA   80 (178)
T ss_dssp             SEEEE--CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSH
T ss_pred             EEEEE--eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcc
Confidence            44444  67899999999999999999999999998887766542110                   1111222334445


Q ss_pred             HHHHHHHHHHHHhCCccEEEECC
Q 023553           80 DVCSAVDLTVEKFGTLDIMVNNA  102 (280)
Q Consensus        80 ~~~~~~~~~~~~~g~id~li~~a  102 (280)
                      .+...++.+...+.+=+++++..
T Consensus        81 ~~~~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          81 ATDSTIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECC
T ss_pred             hhhhhhhhhhhhccccceecccC
Confidence            55555666655554545565544

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.92  E-value=0.12  Score=35.17  Aligned_cols=71  Identities=11%  Similarity=0.123  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      ...++.|.| +|=||+.++....+.|++|++.+.+++.-...       ..-.++..|..|.+.+.++....     ++|
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~-------va~~~i~~~~~d~~~l~~~~~~~-----~~D   76 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH-------VAHRSHVINMLDGDALRRVVELE-----KPH   76 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG-------GSSEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh-------cCCeEEECCCCCHHHHHHHHHhh-----CCc
Confidence            456899999 56799999999999999999999876532211       11246678999999988877654     788


Q ss_pred             EEEE
Q 023553           97 IMVN  100 (280)
Q Consensus        97 ~li~  100 (280)
                      ++-+
T Consensus        77 viT~   80 (111)
T d1kjqa2          77 YIVP   80 (111)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            8753

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.92  E-value=0.085  Score=37.34  Aligned_cols=76  Identities=16%  Similarity=0.273  Sum_probs=53.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-CCeEEE-EecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           20 VALITGGATGIGESTVRLFHKH-GAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~-g~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      ++.|.|++|..|+.+++...+. ++.++. +++... +....   ....++   ..|++.++.+.+.++.+.+.  ++-+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~~~---~~~~Dv---vIDFS~p~~~~~~~~~~~~~--~~~~   71 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSLLT---DGNTEV---VIDFTHPDVVMGNLEFLIDN--GIHA   71 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THHHH---TTTCSE---EEECCCTTTHHHHHHHHHHT--TCEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhhhc---cccCCE---EEEcccHHHHHHHHHHHHhc--CCCE
Confidence            5889999999999999988775 666554 454432 22221   122343   35999999999999888766  6777


Q ss_pred             EEECCCC
Q 023553           98 MVNNAGI  104 (280)
Q Consensus        98 li~~ag~  104 (280)
                      +|-..|.
T Consensus        72 ViGTTG~   78 (135)
T d1yl7a1          72 VVGTTGF   78 (135)
T ss_dssp             EECCCCC
T ss_pred             EEecccc
Confidence            8876664

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.77  E-value=0.012  Score=45.09  Aligned_cols=38  Identities=29%  Similarity=0.391  Sum_probs=33.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      .++.||++.|.|. |.||+.+++.+...|++|+..++..
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            5689999999986 5699999999999999999998864

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.73  E-value=0.16  Score=38.02  Aligned_cols=40  Identities=23%  Similarity=0.190  Sum_probs=34.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        12 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      ...++.++++.|. |.|.||+.+++.+...|++|+..++..
T Consensus        38 ~~~~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          38 GSFEARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             -CCCSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccccceEEEEe-ecccchhhhhhhcccccceEeeccccc
Confidence            3457899999999 578999999999999999999998864

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.65  E-value=0.021  Score=41.72  Aligned_cols=35  Identities=14%  Similarity=-0.006  Sum_probs=31.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~   55 (280)
                      +++|.|+ |.+|..++..|++.|++|.+++|+++..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            5788888 9999999999999999999999987643

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.56  E-value=0.031  Score=42.31  Aligned_cols=42  Identities=14%  Similarity=0.108  Sum_probs=35.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~   55 (280)
                      ..++.||++.|.|. |.||+.+++.+...|++|+..++.....
T Consensus        42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~   83 (191)
T d1gdha1          42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS   83 (191)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH
T ss_pred             cceecccceEEeec-ccchHHHHHHHHhhcccccccccccccc
Confidence            35689999999975 6899999999999999999998865543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.51  E-value=0.036  Score=38.84  Aligned_cols=70  Identities=21%  Similarity=0.290  Sum_probs=49.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      |.++|.|. +.+|+.+++.|.  |..|+++..+++..+...+     ..+.++..|.++++.++++      ...+-+.+
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~-----~~~~~i~Gd~~~~~~L~~a------~i~~A~~v   66 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLR-----SGANFVHGDPTRVSDLEKA------NVRGARAV   66 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH-----TTCEEEESCTTSHHHHHHT------TCTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh-----cCccccccccCCHHHHHHh------hhhcCcEE
Confidence            45778875 778999999994  5568888888877665533     2467888999998765421      12466777


Q ss_pred             EECC
Q 023553           99 VNNA  102 (280)
Q Consensus        99 i~~a  102 (280)
                      |...
T Consensus        67 i~~~   70 (129)
T d2fy8a1          67 IVNL   70 (129)
T ss_dssp             EECC
T ss_pred             EEec
Confidence            7654

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.46  E-value=0.048  Score=42.50  Aligned_cols=102  Identities=16%  Similarity=0.072  Sum_probs=67.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      +.+++|=.|++.|   .++..|+++|++|++++.+++-++.+.+.... +.++.++..|+.+..           .-++.
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-----------~~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-----------FKNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-----------CCSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc-----------ccccc
Confidence            5678999999987   45667889999999999998877766555433 346888888876532           01478


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEE
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIIS  152 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~  152 (280)
                      |.+++.-+...       ..+.++..+           +++.+...|+  ++|.++.
T Consensus       107 D~I~~~~~~~~-------~~~~~~~~~-----------~L~~~~~~Lk--pgG~lii  143 (251)
T d1wzna1         107 DAVTMFFSTIM-------YFDEEDLRK-----------LFSKVAEALK--PGGVFIT  143 (251)
T ss_dssp             EEEEECSSGGG-------GSCHHHHHH-----------HHHHHHHHEE--EEEEEEE
T ss_pred             chHhhhhhhhh-------cCChHHHHH-----------HHHHHHHHcC--CCcEEEE
Confidence            98887643321       133334333           3556666664  3566664

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.46  E-value=0.06  Score=40.47  Aligned_cols=65  Identities=14%  Similarity=0.060  Sum_probs=45.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHH----------HHhCCCCCeEEEecCCCCH
Q 023553           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----------QSLGGEPDTFFCHCDVTKE   78 (280)
Q Consensus        13 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~----------~~~~~~~~~~~~~~D~~~~   78 (280)
                      ..++.++++.|.| .|.||+++++.+...|.+|+..++.........          +++-...++..+.+.++++
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~  113 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPE  113 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTT
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhccccccc
Confidence            4568999999998 578999999999999999999998643222211          1111234666666766653

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.40  E-value=0.27  Score=35.90  Aligned_cols=104  Identities=15%  Similarity=0.181  Sum_probs=71.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      .+..+++|.|+ +--|.+-++.....|+.|.+++.+.+.++++........  ..   -.++++.+.+.+.       .-
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~--~~---~~~~~~~l~~~~~-------~a   96 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRV--EL---LYSNSAEIETAVA-------EA   96 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGS--EE---EECCHHHHHHHHH-------TC
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccc--ee---ehhhhhhHHHhhc-------cC
Confidence            45678888886 467888899999999999999999999988877665322  22   2345665544444       78


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcc
Q 023553           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS  155 (280)
                      |++|..+-+....                     ++..+.+..+..|++  +.-||-++-
T Consensus        97 DivI~aalipG~~---------------------aP~lIt~~mv~~Mk~--GSVIVDvai  133 (168)
T d1pjca1          97 DLLIGAVLVPGRR---------------------APILVPASLVEQMRT--GSVIVDVAV  133 (168)
T ss_dssp             SEEEECCCCTTSS---------------------CCCCBCHHHHTTSCT--TCEEEETTC
T ss_pred             cEEEEeeecCCcc---------------------cCeeecHHHHhhcCC--CcEEEEeec
Confidence            9999999876542                     233345567777743  445555543

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.37  E-value=0.052  Score=40.34  Aligned_cols=75  Identities=13%  Similarity=0.108  Sum_probs=54.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--------------CCeEEEecCCCCHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--------------PDTFFCHCDVTKEEDV   81 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~D~~~~~~~   81 (280)
                      .+|++||..|++.|   ..+..|+++|++|++++-+++.++...+..+..              ....++.+|..+....
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            47899999999988   477799999999999999999888877665432              2345677777664321


Q ss_pred             HHHHHHHHHHhCCccEEEECC
Q 023553           82 CSAVDLTVEKFGTLDIMVNNA  102 (280)
Q Consensus        82 ~~~~~~~~~~~g~id~li~~a  102 (280)
                         ..      ...|.++...
T Consensus        96 ---~~------~~~D~i~~~~  107 (201)
T d1pjza_          96 ---DI------GHCAAFYDRA  107 (201)
T ss_dssp             ---HH------HSEEEEEEES
T ss_pred             ---cc------cceeEEEEEe
Confidence               00      2678776654

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.34  E-value=0.067  Score=38.95  Aligned_cols=79  Identities=11%  Similarity=0.084  Sum_probs=51.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC----------CCCCeEEEecCCCCHHHHHHHHH---H
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG----------GEPDTFFCHCDVTKEEDVCSAVD---L   87 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~---~   87 (280)
                      +-|. |.|-+|..+|+.|+++|++|++.+|++++.+++.+.-.          ...++.+  .-+.+.+.+++++.   .
T Consensus         3 IgiI-GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii--~~v~~~~~v~~v~~~~~~   79 (161)
T d1vpda2           3 VGFI-GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVII--TMLPNSPHVKEVALGENG   79 (161)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEE--ECCSSHHHHHHHHHSTTC
T ss_pred             EEEE-ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEE--EEcCCHHHHHHHHhCCcc
Confidence            4445 45899999999999999999999999887776644221          1123333  34567777777662   3


Q ss_pred             HHHHhCCccEEEECC
Q 023553           88 TVEKFGTLDIMVNNA  102 (280)
Q Consensus        88 ~~~~~g~id~li~~a  102 (280)
                      +.....+=+++|...
T Consensus        80 ~~~~~~~g~iiid~s   94 (161)
T d1vpda2          80 IIEGAKPGTVLIDMS   94 (161)
T ss_dssp             HHHHCCTTCEEEECS
T ss_pred             hhhccCCCCEEEECC
Confidence            444333445555554

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.28  E-value=0.05  Score=41.28  Aligned_cols=71  Identities=21%  Similarity=0.194  Sum_probs=52.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      -++.||+||=.|+++|+   ++..++..|+ +|++++.+++..+.+.+..   .++.++.+|+.+.             -
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~---~~~~~~~~D~~~l-------------~  105 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC---GGVNFMVADVSEI-------------S  105 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC---TTSEEEECCGGGC-------------C
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc---ccccEEEEehhhc-------------C
Confidence            46899999999998873   3344667776 5999999988776655443   3567888887532             2


Q ss_pred             CCccEEEECCC
Q 023553           93 GTLDIMVNNAG  103 (280)
Q Consensus        93 g~id~li~~ag  103 (280)
                      ++.|++|.|.-
T Consensus       106 ~~fD~Vi~NPP  116 (197)
T d1ne2a_         106 GKYDTWIMNPP  116 (197)
T ss_dssp             CCEEEEEECCC
T ss_pred             CcceEEEeCcc
Confidence            68999999864

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.24  E-value=0.35  Score=34.69  Aligned_cols=77  Identities=21%  Similarity=0.160  Sum_probs=44.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCcc--hHHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGA-------KVCIADVQDN--LGQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +|.|+||+|.+|..++..|+..+.       .+++.+.+..  ..+.+..++.  .......+..- .+.++        
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~--------   75 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT-DKEEI--------   75 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE-SCHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccC-ccccc--------
Confidence            799999999999999999987542       2455555432  2333222221  11222222221 12211        


Q ss_pred             HHHhCCccEEEECCCCCCC
Q 023553           89 VEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~~~  107 (280)
                        .+...|++|..+|....
T Consensus        76 --~~~~~dvVVitag~~~~   92 (154)
T d5mdha1          76 --AFKDLDVAILVGSMPRR   92 (154)
T ss_dssp             --HTTTCSEEEECCSCCCC
T ss_pred             --ccCCceEEEEecccCCC
Confidence              22489999999998654

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.88  E-value=0.17  Score=37.61  Aligned_cols=85  Identities=24%  Similarity=0.201  Sum_probs=55.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC---------------HHHH
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK---------------EEDV   81 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~---------------~~~~   81 (280)
                      +.-+|+|.|| +-.|..-++.....|+.|.+.+.+.+.++++.+....     ++..+..+               ++..
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~-----~i~~~~~~~~~~~~~~gyA~~~s~~~~  101 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGK-----FITVDDEAMKTAETAGGYAKEMGEEFR  101 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCE-----ECCC-----------------------
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcc-----eEEEeccccccccccccchhhcCHHHH
Confidence            3457788876 4678888999999999999999999988887654331     11111111               1112


Q ss_pred             HHHHHHHHHHhCCccEEEECCCCCCC
Q 023553           82 CSAVDLTVEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        82 ~~~~~~~~~~~g~id~li~~ag~~~~  107 (280)
                      ...-+.+.+...+-|++|..+-+...
T Consensus       102 ~~~~~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1         102 KKQAEAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             CCHHHHHHHHHTTCSEEEECCCCTTS
T ss_pred             HHHHHHHHHHHHhhhhheeeeecCCc
Confidence            22233444555689999999987654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.81  E-value=0.77  Score=34.26  Aligned_cols=39  Identities=21%  Similarity=0.155  Sum_probs=32.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   60 (280)
                      +.|. |.|-+|..+|..|++.|++|++.+.+.+..+.+.+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence            4444 78899999999999999999999999887666543

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.72  E-value=0.3  Score=34.54  Aligned_cols=84  Identities=8%  Similarity=0.025  Sum_probs=60.5

Q ss_pred             CCcEEEEEcCC---ChHHHHHHHHHHHcCCeEEEEecCcchHH-----HHHHHhCCCCCeEEEecCCCCHHHHHHHHHHH
Q 023553           17 VGRVALITGGA---TGIGESTVRLFHKHGAKVCIADVQDNLGQ-----QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        17 ~~k~vlItGas---~giG~~ia~~l~~~g~~Vi~~~r~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +-|.+.|.|+|   +..|..+++.|.+.|++|+.+..+.....     ....++....+...+   ...++.+..+++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i---~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL---FVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE---CSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE---EeCHHHHHHHHHHH
Confidence            68999999998   68999999999999999999876643221     112223333444443   34688888889988


Q ss_pred             HHHhCCccEEEECCCCC
Q 023553           89 VEKFGTLDIMVNNAGIS  105 (280)
Q Consensus        89 ~~~~g~id~li~~ag~~  105 (280)
                      .+.  ++..++...|..
T Consensus        95 ~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          95 IKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHH--TCSEEEECTTCC
T ss_pred             HHh--CCCEEEEecccc
Confidence            876  677888888754

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.67  E-value=0.73  Score=32.48  Aligned_cols=108  Identities=15%  Similarity=0.211  Sum_probs=62.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC----C-CCCeEEEe-cCCCCHHHHHHHHHHHHHH
Q 023553           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG----G-EPDTFFCH-CDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~----~-~~~~~~~~-~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++.|.|+ |.+|..+|..++..|.  .+++++.+++..+.....+.    . ........ -|.   +++          
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~~~----------   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---SLL----------   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---GGG----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---HHh----------
Confidence            4667786 9999999999998874  49999998876543322221    1 11222222 232   221          


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccC-CCceEEEEc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISIC  154 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~is  154 (280)
                       ..-|++|..||....+     ..+.   .+.+..|.    .+.+.+.+.+.+. .++.++.+|
T Consensus        68 -~~adiVvitag~~~~~-----g~~r---~~l~~~n~----~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          68 -KGSEIIVVTAGLARKP-----GMTR---LDLAHKNA----GIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             -TTCSEEEECCCCCCCS-----SCCH---HHHHHHHH----HHHHHHHHHHHTTSTTCEEEECS
T ss_pred             -ccccEEEEeccccCCC-----CCch---HHHHHHhh----HHHHHHHHHHHhhCCCcEEEEec
Confidence             3789999999975431     2333   23333343    3444555555444 345555544

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=93.58  E-value=1  Score=33.61  Aligned_cols=143  Identities=15%  Similarity=0.126  Sum_probs=83.2

Q ss_pred             ccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           15 RLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ...|.++++...  ...+..+++..|.+.|..|+.+....+                      .+.+.+.   + .....
T Consensus        22 ~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~----------------------~~~~~l~---~-~~~~~   75 (209)
T d2fr1a2          22 RLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR----------------------CGRDELA---E-RLRSV   75 (209)
T ss_dssp             CCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT----------------------CCHHHHH---H-HHTTS
T ss_pred             CCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc----------------------cCHHHHH---H-Hhhcc
Confidence            345666666533  345788899999999988876543322                      1222222   2 22233


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023553           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +.++.+|+..+..... .  ...+      .....+...+.++|++...   ....++.+++....... .+-..-....
T Consensus        76 ~~~~~vv~l~~~~~~~-~--~~~~------~~~~~~~~~l~l~qal~~~---~~~~~l~~vT~~a~~~~-~~d~~~~p~~  142 (209)
T d2fr1a2          76 GEVAGVLSLLAVDEAE-P--EEAP------LALASLADTLSLVQAMVSA---ELGCPLWTVTESAVATG-PFERVRNAAH  142 (209)
T ss_dssp             CCCSEEEECTTTTCCC-C--SSCG------GGCHHHHHHHHHHHHHHHT---TCCCCEEEEEESCSCSS-TTSCCSCGGG
T ss_pred             CCCCeEEEeCCCCCCC-C--cchh------HHHHHHHHHHHHHHHHHhC---CCCCcEEEEEcCCcccC-CCcccCCHhH
Confidence            6789999987654321 1  1111      1122355666677776553   33466776665433222 2233445679


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEE
Q 023553          173 HAVLGLNKNVAAELGKYGIRVNCV  196 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v  196 (280)
                      +++-+|++.++.|++...++...+
T Consensus       143 A~l~Gl~r~~~~E~P~l~~~~vDl  166 (209)
T d2fr1a2         143 GALWGVGRVIALENPAVWGGLVDV  166 (209)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred             HhHHHHHHHHHHhCCCceEEEEEC
Confidence            999999999999987744454444

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.53  E-value=0.11  Score=42.32  Aligned_cols=115  Identities=10%  Similarity=0.020  Sum_probs=68.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .+|++||=.++..| |.++  +++..+.+|+.++.++..++...+....+  .++.++..|..+.      .+...+.-+
T Consensus       144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~~~~  214 (318)
T d1wxxa2         144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEKEGE  214 (318)
T ss_dssp             CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHHTTC
T ss_pred             hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHhhhc
Confidence            58999998877654 3333  34556778999999998877766555322  4677888875432      333333445


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEE
Q 023553           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISI  153 (280)
Q Consensus        94 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~i  153 (280)
                      +.|.+|.++.....  .   .......       ......++..+.+.++.  +|.+++.
T Consensus       215 ~fD~Vi~DpP~~~~--~---~~~~~~~-------~~~~~~l~~~a~~lLkp--GG~Lv~~  260 (318)
T d1wxxa2         215 RFDLVVLDPPAFAK--G---KKDVERA-------YRAYKEVNLRAIKLLKE--GGILATA  260 (318)
T ss_dssp             CEEEEEECCCCSCC--S---TTSHHHH-------HHHHHHHHHHHHHTEEE--EEEEEEE
T ss_pred             CCCEEEEcCCcccc--c---hHHHHHH-------HHHHHHHHHHHHHHcCC--CCEEEEE
Confidence            89999999754332  1   1111111       11233466677777643  5666543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.48  E-value=0.24  Score=33.65  Aligned_cols=37  Identities=24%  Similarity=0.370  Sum_probs=31.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      ..|.++|.|| |.+|.++|..|++.|.+|.++.|.+..
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEeccee
Confidence            3467777775 689999999999999999999888764

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.41  E-value=0.042  Score=46.93  Aligned_cols=36  Identities=19%  Similarity=0.334  Sum_probs=31.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~   51 (280)
                      .|++.+|||.|+ ||||.++++.|+..|. ++.+++.+
T Consensus        34 ~l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          34 LLDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HHhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            368889999999 6799999999999998 58888765

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.30  E-value=0.47  Score=32.18  Aligned_cols=82  Identities=17%  Similarity=0.142  Sum_probs=58.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      ||++||.--..-+-..+...|.+.|+.|+..+.+.+..-+..++..  .++.++..++.+.+ --++++++++....+-+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~~--~dliilD~~mp~~~-G~e~~~~ir~~~~~~pv   77 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELK--PDIVTMDITMPEMN-GIDAIKEIMKIDPNAKI   77 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--CSEEEEECSCGGGC-HHHHHHHHHHHCTTCCE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhcc--CCEEEEecCCCCCC-HHHHHHHHHHhCCCCcE
Confidence            7999999999999999999999999999876665443333333332  46666666655543 34667777777667777


Q ss_pred             EEECC
Q 023553           98 MVNNA  102 (280)
Q Consensus        98 li~~a  102 (280)
                      ++..+
T Consensus        78 i~ls~   82 (118)
T d1u0sy_          78 IVCSA   82 (118)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            77654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.17  E-value=0.25  Score=33.55  Aligned_cols=35  Identities=23%  Similarity=0.229  Sum_probs=29.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      |+++|.| +|-+|.++|..|++.|.+|.++.|.+..
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecchh
Confidence            5666665 4789999999999999999999887653

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.14  E-value=0.096  Score=37.66  Aligned_cols=41  Identities=17%  Similarity=0.294  Sum_probs=34.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHh
Q 023553           21 ALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~   62 (280)
                      +.+.|+ |-+|.++++.|.+.| ++|++.+|+++..+.+.++.
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            556655 999999999999887 88999999999888777654

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.03  E-value=0.089  Score=40.57  Aligned_cols=60  Identities=10%  Similarity=0.087  Sum_probs=46.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-------------------CCCeEEEecCCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-------------------EPDTFFCHCDVT   76 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-------------------~~~~~~~~~D~~   76 (280)
                      .++++||..|++.|   ..+..|+++|++|++++-++..++...+....                   ...+.++.+|+.
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~  120 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF  120 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence            37889999999987   45888999999999999999988776655421                   135777888876


Q ss_pred             CH
Q 023553           77 KE   78 (280)
Q Consensus        77 ~~   78 (280)
                      +.
T Consensus       121 ~l  122 (229)
T d2bzga1         121 DL  122 (229)
T ss_dssp             GG
T ss_pred             hc
Confidence            43

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.97  E-value=0.46  Score=35.67  Aligned_cols=74  Identities=22%  Similarity=0.222  Sum_probs=53.6

Q ss_pred             cccCCcEEEEEcCCCh-HHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           14 QRLVGRVALITGGATG-IGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGas~g-iG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .+++|++||=.|+++| ++.    .++..|+ .|++++.+++.++.+.+.+.. ..+..++..|..+.            
T Consensus        43 ~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~------------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF------------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC------------
T ss_pred             CCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh------------
Confidence            4589999999999766 443    3456775 799999998877766655543 35677888886432            


Q ss_pred             HhCCccEEEECCCC
Q 023553           91 KFGTLDIMVNNAGI  104 (280)
Q Consensus        91 ~~g~id~li~~ag~  104 (280)
                       .++.|++|.|.-.
T Consensus       107 -~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 -NSRVDIVIMNPPF  119 (201)
T ss_dssp             -CCCCSEEEECCCC
T ss_pred             -CCcCcEEEEcCcc
Confidence             2589999999854

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.91  E-value=0.22  Score=34.24  Aligned_cols=36  Identities=25%  Similarity=0.411  Sum_probs=30.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      .|+++|.|| |-||.++|..|++.|++|.++.+.+..
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence            467777765 689999999999999999999887654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.72  E-value=0.35  Score=37.52  Aligned_cols=36  Identities=22%  Similarity=0.407  Sum_probs=31.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~   51 (280)
                      .|++++|+|.| .||+|..++..|+..|. ++.++|.+
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            48999999999 67899999999999998 47787754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.70  E-value=0.29  Score=33.76  Aligned_cols=36  Identities=17%  Similarity=0.236  Sum_probs=31.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      .|+++|.||+ .||.++|..|++.|.+|.++.|++..
T Consensus        22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecccc
Confidence            3778888875 69999999999999999999997653

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.57  E-value=0.18  Score=40.69  Aligned_cols=75  Identities=21%  Similarity=0.182  Sum_probs=52.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHH--HHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQ--QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++||+||-.|+++|+   ++..++++|+ +|++++.++....  +.........++.++..|+.+...          .
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~   99 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL----------P   99 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC----------c
Confidence            4689999999999886   5777888897 6999988865332  222222334678888888876421          1


Q ss_pred             hCCccEEEECC
Q 023553           92 FGTLDIMVNNA  102 (280)
Q Consensus        92 ~g~id~li~~a  102 (280)
                      ..+.|+++...
T Consensus       100 ~~~~D~Ivse~  110 (311)
T d2fyta1         100 VEKVDVIISEW  110 (311)
T ss_dssp             CSCEEEEEECC
T ss_pred             cccceEEEEee
Confidence            14899998753

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.56  E-value=0.51  Score=33.96  Aligned_cols=80  Identities=9%  Similarity=0.039  Sum_probs=50.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh----------CCCCCeEEEecCCCCHHHHHHHHHH--
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----------GGEPDTFFCHCDVTKEEDVCSAVDL--   87 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~----------~~~~~~~~~~~D~~~~~~~~~~~~~--   87 (280)
                      +|.|. |.|-+|.++|++|+++|+.|.+.+|+.++.+.+...-          -...++.+  .-+.+...++.++..  
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii--~~v~~~~~~~~v~~~~~   79 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVI--SMLPASQHVEGLYLDDD   79 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEE--ECCSCHHHHHHHHHSTT
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeee--ecccchhhHHHHHhccc
Confidence            45555 5689999999999999999999999988766554322          11123333  345566666665543  


Q ss_pred             -HHHHhCCccEEEECC
Q 023553           88 -TVEKFGTLDIMVNNA  102 (280)
Q Consensus        88 -~~~~~g~id~li~~a  102 (280)
                       +.....+=+++|...
T Consensus        80 ~~~~~l~~g~iiid~s   95 (162)
T d3cuma2          80 GLLAHIAPGTLVLECS   95 (162)
T ss_dssp             CHHHHSCTTCEEEECS
T ss_pred             cccccCCCCCEEEECC
Confidence             333333334555554

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.45  E-value=0.13  Score=36.99  Aligned_cols=40  Identities=15%  Similarity=0.135  Sum_probs=32.3

Q ss_pred             CCcEEEEE-cCCChHHHHHHHHHHHcCCeEEEEecCcchHH
Q 023553           17 VGRVALIT-GGATGIGESTVRLFHKHGAKVCIADVQDNLGQ   56 (280)
Q Consensus        17 ~~k~vlIt-Gas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~   56 (280)
                      .++.++|. .+++.||.++|..|+++|++|.++.+.+..+.
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~   78 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLANY   78 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTTH
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcccc
Confidence            45566665 56799999999999999999999998765443

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.27  E-value=0.098  Score=37.70  Aligned_cols=38  Identities=8%  Similarity=0.226  Sum_probs=33.8

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC
Q 023553           26 GATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG   63 (280)
Q Consensus        26 as~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~   63 (280)
                      |.|-+|.++++.|.+.|++|++..|+.++.+++.+...
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g   44 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLA   44 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHT
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccc
Confidence            77899999999999999999999999998888776654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.18  E-value=0.32  Score=33.14  Aligned_cols=36  Identities=14%  Similarity=0.184  Sum_probs=30.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.|.+..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~i   57 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNRI   57 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhccc
Confidence            467777765 689999999999999999999987653

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.09  E-value=0.14  Score=35.31  Aligned_cols=37  Identities=27%  Similarity=0.362  Sum_probs=31.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      .++|+++|.| +|.+|.++|..|++.|.+|.++.+.+.
T Consensus        28 ~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          28 PEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence            3577888885 569999999999999999999988764

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.97  E-value=0.092  Score=41.45  Aligned_cols=36  Identities=19%  Similarity=0.303  Sum_probs=32.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV   50 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r   50 (280)
                      .+++||+++|.| .|.+|+.+++.|.+.|++|+.++-
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            468999999998 799999999999999999987754

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.95  E-value=0.14  Score=35.26  Aligned_cols=37  Identities=27%  Similarity=0.324  Sum_probs=31.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      ++|+++|.|| |.+|.++|..|++.|.+|.++.+.+..
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence            4677777765 789999999999999999999988764

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=91.88  E-value=0.32  Score=37.40  Aligned_cols=76  Identities=18%  Similarity=0.076  Sum_probs=56.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|.+||-.|+++|--.   ..|++.+.+|+.+..+++..+...+......++.++..|...--          ...++.|
T Consensus        70 ~g~~VLdIG~GsGy~t---a~La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~----------~~~~pfD  136 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYT---ALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY----------EEEKPYD  136 (224)
T ss_dssp             TTCEEEEECCTTSHHH---HHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC----------GGGCCEE
T ss_pred             ccceEEEecCCCCHHH---HHHHHHhcccccccccHHHHHHHHHHHhcccccccccCchhhcc----------hhhhhHH
Confidence            7889999999988543   34666778999999998877777666665678888888875310          1125899


Q ss_pred             EEEECCCCC
Q 023553           97 IMVNNAGIS  105 (280)
Q Consensus        97 ~li~~ag~~  105 (280)
                      .++.+++..
T Consensus       137 ~Iiv~~a~~  145 (224)
T d1vbfa_         137 RVVVWATAP  145 (224)
T ss_dssp             EEEESSBBS
T ss_pred             HHHhhcchh
Confidence            999888753

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.85  E-value=0.1  Score=40.83  Aligned_cols=37  Identities=27%  Similarity=0.335  Sum_probs=32.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~   51 (280)
                      .+|+||+++|-| .|..|..+|+.|.+.|++|+.++..
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            368999999996 8999999999999999999877643

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=91.40  E-value=0.096  Score=39.31  Aligned_cols=42  Identities=17%  Similarity=0.329  Sum_probs=34.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS   61 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~   61 (280)
                      +++.|.|++ ..|.++|..|++.|++|.+.+|+++..+.+.+.
T Consensus         8 ~KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           8 NKAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             ceEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            467787765 489999999999999999999998877766543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.21  E-value=0.27  Score=36.41  Aligned_cols=41  Identities=15%  Similarity=0.207  Sum_probs=34.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~   55 (280)
                      ...+.|+|+|.|| |.-|.+.|..|+++|++|.++.+.+...
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~G   79 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEIG   79 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSSC
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCccC
Confidence            3457889999986 5678999999999999999999987543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.03  E-value=0.18  Score=38.76  Aligned_cols=36  Identities=19%  Similarity=0.222  Sum_probs=29.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      .+.|+|+|.|| |-.|..+|..|+++|++|.++.|..
T Consensus         4 ~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           4 HSQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            34567788776 5789999999999999999999864

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=90.77  E-value=0.19  Score=39.54  Aligned_cols=74  Identities=22%  Similarity=0.222  Sum_probs=52.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      ..+|++||=.|+++|+   ++..+++.|++|++++.++..++...+.... .....++..|+.+      .+     ..+
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~~-----~~~  183 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------AL-----PFG  183 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------HG-----GGC
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------cc-----ccc
Confidence            3689999999999986   3345778899999999999888776654432 2355666666421      01     126


Q ss_pred             CccEEEECC
Q 023553           94 TLDIMVNNA  102 (280)
Q Consensus        94 ~id~li~~a  102 (280)
                      +.|+++.|.
T Consensus       184 ~fD~V~ani  192 (254)
T d2nxca1         184 PFDLLVANL  192 (254)
T ss_dssp             CEEEEEEEC
T ss_pred             ccchhhhcc
Confidence            899998773

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.70  E-value=0.49  Score=38.39  Aligned_cols=114  Identities=13%  Similarity=0.035  Sum_probs=67.4

Q ss_pred             CCcEEEEEcCC-ChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           17 VGRVALITGGA-TGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGas-~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +|++||=.++. |+++..    ++..|+ +|+.++.+++.++...+....   ..++.++..|..+      .+..+...
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc
Confidence            58899988775 555544    345676 699999999877766554432   2456777776532      23344344


Q ss_pred             hCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEc
Q 023553           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        92 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~is  154 (280)
                      -.+.|++|.++-....        +..+....    ......++..+++.++.  +|.+++.+
T Consensus       215 ~~~fD~Vi~DpP~~~~--------~~~~~~~~----~~~y~~l~~~a~~ll~p--GG~lv~~s  263 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQ--------HEKDLKAG----LRAYFNVNFAGLNLVKD--GGILVTCS  263 (324)
T ss_dssp             TCCEEEEEECCCCSCS--------SGGGHHHH----HHHHHHHHHHHHTTEEE--EEEEEEEE
T ss_pred             cCCCCchhcCCccccC--------CHHHHHHH----HHHHHHHHHHHHHHcCC--CcEEEEEe
Confidence            4689999998754322        11122221    22344466777777643  56666544

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.52  E-value=0.2  Score=40.20  Aligned_cols=36  Identities=19%  Similarity=0.329  Sum_probs=32.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV   50 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r   50 (280)
                      .+|+||+++|-|- |.+|+.+|+.|.+.|++|+.++-
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            4689999999987 79999999999999999988764

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.51  E-value=1.1  Score=30.20  Aligned_cols=81  Identities=14%  Similarity=0.128  Sum_probs=54.9

Q ss_pred             cEEEEEcCC---ChHHHHHHHHHHHcCCeEEEEecCcchHH-----HHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           19 RVALITGGA---TGIGESTVRLFHKHGAKVCIADVQDNLGQ-----QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        19 k~vlItGas---~giG~~ia~~l~~~g~~Vi~~~r~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      |.+.|.|+|   +..|..+.+.|.+.|++|+.+..+.+...     ....++....+..++   ...++.+.++++++.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi---~vp~~~~~~~l~~~~~   78 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVF---VVPPKVGLQVAKEAVE   78 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEE---CSCHHHHHHHHHHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEE---EeCHHHHHHHHHHHHh
Confidence            789999998   56999999999999999988865533211     112233333444443   2467778888888776


Q ss_pred             HhCCccEEEECCCC
Q 023553           91 KFGTLDIMVNNAGI  104 (280)
Q Consensus        91 ~~g~id~li~~ag~  104 (280)
                      .  ++..++...|.
T Consensus        79 ~--g~k~v~~~~g~   90 (116)
T d1y81a1          79 A--GFKKLWFQPGA   90 (116)
T ss_dssp             T--TCCEEEECTTS
T ss_pred             c--CCceEEeccch
Confidence            5  56677766553

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=90.42  E-value=1.1  Score=29.08  Aligned_cols=73  Identities=12%  Similarity=0.100  Sum_probs=46.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +.|++.+.|-++--=.++|+.|.++|+.|...|+......+...+..    +.+...+-.  +.           ....|
T Consensus         7 ~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~G----i~v~~g~~~--~~-----------i~~~d   69 (96)
T d1p3da1           7 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAG----AKIYIGHAE--EH-----------IEGAS   69 (96)
T ss_dssp             TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTT----CEEEESCCG--GG-----------GTTCS
T ss_pred             hCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCC----CeEEECCcc--cc-----------CCCCC
Confidence            56778887765433367899999999999999997654433333322    223322222  11           13789


Q ss_pred             EEEECCCCCC
Q 023553           97 IMVNNAGISG  106 (280)
Q Consensus        97 ~li~~ag~~~  106 (280)
                      .+|+..++..
T Consensus        70 ~vV~S~AI~~   79 (96)
T d1p3da1          70 VVVVSSAIKD   79 (96)
T ss_dssp             EEEECTTSCT
T ss_pred             EEEECCCcCC
Confidence            9999998854

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=90.38  E-value=3.5  Score=32.93  Aligned_cols=143  Identities=14%  Similarity=0.102  Sum_probs=78.8

Q ss_pred             CCcEEEEEcCC-ChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhC--C--CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023553           17 VGRVALITGGA-TGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLG--G--EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        17 ~~k~vlItGas-~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~--~--~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +|++||=..+. |+++.+    .+..|+ .|+.++.+...++...+...  .  ..++.++..|..      ..++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            68999988665 555433    445677 59999999887666554442  2  246778888753      22444444


Q ss_pred             HhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023553           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .-.+.|++|..+-....  ..-.-.+.          ......+++.+++.+++  +|.++ ++|-+...          
T Consensus       214 ~~~~fD~Ii~DPP~f~~--~~~~~~~~----------~~~~~~L~~~a~~ll~p--gG~l~-~~scs~~~----------  268 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFAR--NKKEVFSV----------SKDYHKLIRQGLEILSE--NGLII-ASTNAANM----------  268 (317)
T ss_dssp             TTCCEEEEEECCCCC-------CCCCH----------HHHHHHHHHHHHHTEEE--EEEEE-EEECCTTS----------
T ss_pred             hcCCCCEEEEcChhhcc--chhHHHHH----------HHHHHHHHHHHHHHcCC--CCEEE-EEeCCccC----------
Confidence            44589999998643322  11111111          11234467777777744  45554 44432211          


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEe
Q 023553          171 SKHAVLGLNKNVAAELGKYGIRVNCVS  197 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~  197 (280)
                         ..+.|.+.++......+..+..+.
T Consensus       269 ---~~~~f~~~v~~a~~~~~~~~~~~~  292 (317)
T d2b78a2         269 ---TVSQFKKQIEKGFGKQKHTYLDLQ  292 (317)
T ss_dssp             ---CHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred             ---CHHHHHHHHHHHHHHcCCeEEEec
Confidence               122344444555556666665553

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.30  E-value=0.099  Score=35.19  Aligned_cols=39  Identities=21%  Similarity=0.312  Sum_probs=32.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      .+++||+|+|.|++ .-|..+|..|+..+.+|+...|+..
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            46899999999987 6788899999999888777766654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=90.28  E-value=0.31  Score=35.37  Aligned_cols=40  Identities=20%  Similarity=0.392  Sum_probs=35.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      ..+.||+++|.| -+-+|+.+|++|...|++|+++..++-.
T Consensus        19 ~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          19 FLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             ceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchh
Confidence            458999999997 5679999999999999999999998744

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.13  E-value=0.28  Score=39.30  Aligned_cols=24  Identities=17%  Similarity=0.117  Sum_probs=21.4

Q ss_pred             ChHHHHHHHHHHHcCCeEEEEecC
Q 023553           28 TGIGESTVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        28 ~giG~~ia~~l~~~g~~Vi~~~r~   51 (280)
                      |..|.++|+.|..+|+.|+++.+.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            478999999999999999998654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.12  E-value=0.15  Score=37.60  Aligned_cols=36  Identities=14%  Similarity=0.161  Sum_probs=29.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDN   53 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~   53 (280)
                      .+|+|+|.|| |-.|...|..|+++|++ |.++.++..
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            4677888875 67899999999999995 989888754

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.11  E-value=0.24  Score=35.33  Aligned_cols=37  Identities=8%  Similarity=0.046  Sum_probs=29.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   58 (280)
                      +-|. |.|-+|.++++.|+++|+.|+..+++.......
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            4444 559999999999999999999998877655444

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=90.07  E-value=0.27  Score=33.43  Aligned_cols=37  Identities=14%  Similarity=0.250  Sum_probs=31.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      .++|.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            35788887765 78999999999999999999988765

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.02  E-value=0.52  Score=37.99  Aligned_cols=74  Identities=20%  Similarity=0.167  Sum_probs=50.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHH---HhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQ---SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++||+||-.|++.|+   ++..++++|+ +|++++.++. .....+   ..+...++.++..|+.+.+.          .
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------P   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------S
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------c
Confidence            589999999999885   5667888886 5999987754 222222   22333568888888876421          1


Q ss_pred             hCCccEEEECCC
Q 023553           92 FGTLDIMVNNAG  103 (280)
Q Consensus        92 ~g~id~li~~ag  103 (280)
                      ..++|+++....
T Consensus        98 ~~~~D~ivs~~~  109 (316)
T d1oria_          98 VEKVDIIISEWM  109 (316)
T ss_dssp             SSCEEEEEECCC
T ss_pred             cceeEEEeeeee
Confidence            248999987643

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.94  E-value=1  Score=31.05  Aligned_cols=77  Identities=14%  Similarity=0.108  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCCC----------hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHH
Q 023553           17 VGRVALITGGAT----------GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        17 ~~k~vlItGas~----------giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      .-|++||.|++.          --+...++.|.++|++++++..+++...-..+.   ..++++   +--+.+++.++++
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~---aD~lYf---ePlt~e~v~~Ii~   79 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM---ADATYI---EPIHWEVVRKIIE   79 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG---SSEEEC---SCCCHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh---cceeee---ecCCHHHHHHHHH
Confidence            468899998853          345677889999999999999998864332111   123333   3345777766666


Q ss_pred             HHHHHhCCccEEEECCCC
Q 023553           87 LTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        87 ~~~~~~g~id~li~~ag~  104 (280)
                      .     .++|.++-..|.
T Consensus        80 ~-----E~pd~il~~~GG   92 (127)
T d1a9xa3          80 K-----ERPDAVLPTMGG   92 (127)
T ss_dssp             H-----HCCSEEECSSSH
T ss_pred             H-----hCcCCeEEEeee
Confidence            4     289999887763

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=89.91  E-value=0.16  Score=37.05  Aligned_cols=81  Identities=11%  Similarity=0.179  Sum_probs=53.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEE-EecCcch-HHHHH-----------------HHhCCCCCeEEEecCCCCH
Q 023553           19 RVALITGGATGIGESTVRLFHKH-GAKVCI-ADVQDNL-GQQVC-----------------QSLGGEPDTFFCHCDVTKE   78 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~-g~~Vi~-~~r~~~~-~~~~~-----------------~~~~~~~~~~~~~~D~~~~   78 (280)
                      -++.|.|++|..|+++++...+. ++.++. ++|.... .....                 +......+   +..|++.+
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D---ViIDFs~p   81 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD---VFIDFTRP   81 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS---EEEECSCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc---eEEEeccH
Confidence            46899999999999999999886 556443 4443211 00000                 00111122   33699999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEECCCC
Q 023553           79 EDVCSAVDLTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        79 ~~~~~~~~~~~~~~g~id~li~~ag~  104 (280)
                      +...+.++.+.+.  ++-+++-..|.
T Consensus        82 ~~~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          82 EGTLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHHhc--cceeEEecCCC
Confidence            9999999887765  78888888774

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=89.84  E-value=0.34  Score=33.02  Aligned_cols=36  Identities=22%  Similarity=0.276  Sum_probs=30.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      ..+.++|.|| |-||.++|..|++.|++|.++.+.+.
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            4477777775 78999999999999999999987754

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.34  E-value=0.68  Score=37.47  Aligned_cols=74  Identities=20%  Similarity=0.270  Sum_probs=49.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcch--HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHh
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNL--GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++||+||-.|++.|+   ++..++++|+ +|++++.++..  ..+..+......++.++..|+.+.+-          ..
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------~~  103 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHL----------PF  103 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------SS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhccC----------cc
Confidence            589999999999884   4667788887 58888877531  22222333334678889888876420          11


Q ss_pred             CCccEEEECC
Q 023553           93 GTLDIMVNNA  102 (280)
Q Consensus        93 g~id~li~~a  102 (280)
                      .+.|+++...
T Consensus       104 ~~~D~i~se~  113 (328)
T d1g6q1_         104 PKVDIIISEW  113 (328)
T ss_dssp             SCEEEEEECC
T ss_pred             cceeEEEEEe
Confidence            4799998764

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=89.17  E-value=0.17  Score=39.16  Aligned_cols=104  Identities=13%  Similarity=0.054  Sum_probs=70.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+++++|=.|++.|.   ++..|+++|.+|++++.+++.++.+.+.... ..++.++..|+.+.+           ..++
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~~~  101 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------INRK  101 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CSCC
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------cccc
Confidence            567899999999885   7889999999999999999877766554432 246788888886532           1247


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEE
Q 023553           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIIS  152 (280)
Q Consensus        95 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~  152 (280)
                      .|++++..+....      -.+.++...           +++.+...|+  .+|.+|+
T Consensus       102 fD~i~~~~~~~~~------~~~~~~~~~-----------~l~~~~~~Lk--pgG~~i~  140 (246)
T d1y8ca_         102 FDLITCCLDSTNY------IIDSDDLKK-----------YFKAVSNHLK--EGGVFIF  140 (246)
T ss_dssp             EEEEEECTTGGGG------CCSHHHHHH-----------HHHHHHTTEE--EEEEEEE
T ss_pred             ccccceeeeeeec------cCCHHHHHH-----------HHHHHHHhCC--CCeEEEE
Confidence            9999876543211      123344333           3556666663  3577664

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.79  E-value=0.26  Score=36.34  Aligned_cols=33  Identities=18%  Similarity=0.248  Sum_probs=27.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      ++.|.|+ |..|.++|..|++.|++|.+.+|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            4556665 88999999999999999999998644

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=88.50  E-value=1.5  Score=31.20  Aligned_cols=46  Identities=17%  Similarity=0.200  Sum_probs=34.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc--CCeEEEE--ecCcchHHHHHHHhCC
Q 023553           19 RVALITGGATGIGESTVRLFHKH--GAKVCIA--DVQDNLGQQVCQSLGG   64 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~--g~~Vi~~--~r~~~~~~~~~~~~~~   64 (280)
                      |++.|.|+||.||.....-..++  ..+|++.  .++-+.+.+.+.+.++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~p   51 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSP   51 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCC
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhh
Confidence            78999999999999999988887  3556554  4455666666666653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.35  E-value=0.35  Score=34.48  Aligned_cols=34  Identities=6%  Similarity=0.021  Sum_probs=25.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC----CeEEEEecCc
Q 023553           19 RVALITGGATGIGESTVRLFHKHG----AKVCIADVQD   52 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g----~~Vi~~~r~~   52 (280)
                      |++.|.||||-.|+.+.+.|.++.    ..++..+++.
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            578899999999999999887653    2355555543

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=88.34  E-value=0.27  Score=37.27  Aligned_cols=39  Identities=13%  Similarity=0.170  Sum_probs=33.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      .+++||+|+|.|++. -|..+|..+++.+++++.+.|+..
T Consensus        28 ~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~~~   66 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRTPH   66 (235)
T ss_dssp             CCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESSCC
T ss_pred             CCCCCCEEEEECCCc-cHHHHHHHHHhhhccccccccccc
Confidence            468999999998865 489999999999999888877754

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.28  E-value=1.6  Score=30.09  Aligned_cols=84  Identities=15%  Similarity=0.149  Sum_probs=55.7

Q ss_pred             cCCcEEEEEcCC---ChHHHHHHHHHHHcC-CeEEEEecCcchHHH-----HHHHhCCCCCeEEEecCCCCHHHHHHHHH
Q 023553           16 LVGRVALITGGA---TGIGESTVRLFHKHG-AKVCIADVQDNLGQQ-----VCQSLGGEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        16 l~~k~vlItGas---~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ++-|.+.|.|+|   +..|..+.+.|.+.| .+|+.+-.+.+....     ..+++....+..++   ....+.+.++++
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi---~vp~~~~~~~~~   82 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII---VVPKRFVKDTLI   82 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE---CSCHHHHHHHHH
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE---ecChHHhHHHHH
Confidence            678999999998   889999999998766 578888665432211     11222223444444   346888888899


Q ss_pred             HHHHHhCCccE-EEECCCC
Q 023553           87 LTVEKFGTLDI-MVNNAGI  104 (280)
Q Consensus        87 ~~~~~~g~id~-li~~ag~  104 (280)
                      ++.+.  ++.. ++..+|+
T Consensus        83 ~~~~~--g~~~~vi~s~Gf   99 (129)
T d2csua1          83 QCGEK--GVKGVVIITAGF   99 (129)
T ss_dssp             HHHHH--TCCEEEECCCSS
T ss_pred             HHHHc--CCCEEEEecccc
Confidence            88877  5554 4555554

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.25  E-value=0.38  Score=36.54  Aligned_cols=79  Identities=15%  Similarity=0.210  Sum_probs=55.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      +|.+||-.|+++|--.++...+......|+.++.+++..+...+.+..  ..++.++..|..+..          ...++
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccc
Confidence            788999999988877666666666667899999998877766665532  246677777755311          11257


Q ss_pred             ccEEEECCCCC
Q 023553           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 id~li~~ag~~  105 (280)
                      .|.++.+++..
T Consensus       145 fD~I~~~~~~~  155 (213)
T d1dl5a1         145 YDVIFVTVGVD  155 (213)
T ss_dssp             EEEEEECSBBS
T ss_pred             hhhhhhhccHH
Confidence            99999988753

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=88.08  E-value=0.48  Score=32.65  Aligned_cols=37  Identities=24%  Similarity=0.357  Sum_probs=31.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      -..|.++|.|| |-||.++|..|++.|.+|.++.+.+.
T Consensus        24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            34577888775 78999999999999999999988764

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=87.95  E-value=0.16  Score=38.22  Aligned_cols=32  Identities=16%  Similarity=0.236  Sum_probs=28.1

Q ss_pred             cEEEEEcCCChHHH-----HHHHHHHHcCCeEEEEec
Q 023553           19 RVALITGGATGIGE-----STVRLFHKHGAKVCIADV   50 (280)
Q Consensus        19 k~vlItGas~giG~-----~ia~~l~~~g~~Vi~~~r   50 (280)
                      |++.|||.++|.|+     .+|+.|+++|++|.+++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            78999999989887     578899999999999863

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.91  E-value=0.63  Score=34.82  Aligned_cols=74  Identities=16%  Similarity=0.072  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      ++.+||=.||++|.   ++..|++.|++|++++.+++.++.+.+.... ...+.++..|..+...          ..+..
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~----------~~~~f  103 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSF----------EDKTF  103 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCS----------CTTCE
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccccccccccccccccc----------cCcCc
Confidence            45678999999887   6678889999999999998877766554432 2456677777765320          11479


Q ss_pred             cEEEECCC
Q 023553           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |++++...
T Consensus       104 D~I~~~~~  111 (226)
T d1ve3a1         104 DYVIFIDS  111 (226)
T ss_dssp             EEEEEESC
T ss_pred             eEEEEecc
Confidence            99888754

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.61  E-value=3.4  Score=29.20  Aligned_cols=83  Identities=17%  Similarity=0.201  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC---CCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE---PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +|+++.|.+.++|.|--++..+.+.|..+.  .-+++..+++.+.+...   .+-.-+..+ .+.+...+.++.+.+. +
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~--~l~~~t~~~L~~~lp~~~~~~NPlD~~~~-~~~~~~~~~l~~~~~d-~   77 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA--TLEEKTIEELRSFLPPMAAVKNPVDMIAS-ARGEDYYRTAKLLLQD-P   77 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC--CCCHHHHHHHHHHSCTTCEESSEEECCTT-CCHHHHHHHHHHHHHS-T
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC--CCCHHHHHHHHHhCCCcccCCCcccccCC-CCHHHHHHHHHHHHcC-C
Confidence            689999999999999999999999996653  33444444444444322   121112223 3566677777666543 6


Q ss_pred             CccEEEECCC
Q 023553           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~id~li~~ag  103 (280)
                      .+|.++....
T Consensus        78 ~vd~v~v~~~   87 (163)
T d2csua3          78 NVDMLIAICV   87 (163)
T ss_dssp             TCSEEEEEEE
T ss_pred             CcCEEEEeec
Confidence            7888765443

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=87.53  E-value=0.32  Score=34.94  Aligned_cols=35  Identities=17%  Similarity=0.393  Sum_probs=28.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQD   52 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~--~Vi~~~r~~   52 (280)
                      .||+++|.||+ -.|.++|..|.+++.  +|+++.+++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            48999999875 458999999999874  688887664

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.47  E-value=0.74  Score=34.93  Aligned_cols=79  Identities=15%  Similarity=0.106  Sum_probs=58.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .+|.+||..|+++|--.++...++  |..|+.+.++++..+...+.+..  ..++.++..|..+..          ...+
T Consensus        77 ~~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~~  144 (215)
T d1jg1a_          77 KPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPKA  144 (215)
T ss_dssp             CTTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGC
T ss_pred             CccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------cccC
Confidence            378899999999998888888776  56799999997766655554432  357888999876421          1226


Q ss_pred             CccEEEECCCCCC
Q 023553           94 TLDIMVNNAGISG  106 (280)
Q Consensus        94 ~id~li~~ag~~~  106 (280)
                      +.|.++.++++..
T Consensus       145 pfD~Iiv~~a~~~  157 (215)
T d1jg1a_         145 PYDVIIVTAGAPK  157 (215)
T ss_dssp             CEEEEEECSBBSS
T ss_pred             cceeEEeeccccc
Confidence            8999999988753

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=87.45  E-value=0.33  Score=37.83  Aligned_cols=34  Identities=15%  Similarity=0.259  Sum_probs=28.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      +|+|+|.|| |--|...|..|+++|++|.++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            588888876 4567888999999999999998754

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=87.41  E-value=2.5  Score=28.30  Aligned_cols=81  Identities=15%  Similarity=0.130  Sum_probs=57.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccE
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   97 (280)
                      +|++||.--...+-..+.+.|.+.|+.|.......+.++...+ .  ..++.++...+-+.+. .++++++++....+-+
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~~~~~-~--~~dlillD~~mP~~~G-~el~~~lr~~~~~~pv   76 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTK-E--RPDLVLLDMKIPGMDG-IEILKRMKVIDENIRV   76 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHH-H--CCSEEEEESCCTTCCH-HHHHHHHHHHCTTCEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHHHh-C--CCCEEEEeccCCCCCH-HHHHHHHHHhCCCCcE
Confidence            5899999999999999999999999999877665555554433 2  2456666555555543 3567777776666767


Q ss_pred             EEECC
Q 023553           98 MVNNA  102 (280)
Q Consensus        98 li~~a  102 (280)
                      ++..+
T Consensus        77 i~lt~   81 (119)
T d1peya_          77 IIMTA   81 (119)
T ss_dssp             EEEES
T ss_pred             EEEec
Confidence            76655

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.41  E-value=0.29  Score=38.90  Aligned_cols=36  Identities=17%  Similarity=0.281  Sum_probs=29.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      +.|+|+|.||+ --|...|..|+++|++|.++.+++.
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            45788888876 4488999999999999999987654

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.31  E-value=0.25  Score=37.55  Aligned_cols=78  Identities=12%  Similarity=0.097  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   96 (280)
                      +|.+||=.|+++|.-..-+..+...| .|++++-+++.++.+.+..+...++.++..|..++....       ..+..+|
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~-------~~~~~vd  127 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYS-------GIVEKVD  127 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTT-------TTCCCEE
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccc-------cccceEE
Confidence            58899999998885433333333334 899999999888877666655568888888888765421       1123677


Q ss_pred             EEEECC
Q 023553           97 IMVNNA  102 (280)
Q Consensus        97 ~li~~a  102 (280)
                      ++++..
T Consensus       128 ~v~~~~  133 (209)
T d1nt2a_         128 LIYQDI  133 (209)
T ss_dssp             EEEECC
T ss_pred             EEEecc
Confidence            776653

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.29  E-value=0.25  Score=38.87  Aligned_cols=37  Identities=16%  Similarity=0.233  Sum_probs=32.2

Q ss_pred             CCcEEEEEcCCChHHHHH-----HHHHHHcCCeEEEEecCcc
Q 023553           17 VGRVALITGGATGIGEST-----VRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        17 ~~k~vlItGas~giG~~i-----a~~l~~~g~~Vi~~~r~~~   53 (280)
                      .+++++|+.|-||.|+..     |..|++.|.+|++++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            677888888899999976     7999999999999998864

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=87.06  E-value=1.8  Score=27.64  Aligned_cols=69  Identities=14%  Similarity=0.224  Sum_probs=43.2

Q ss_pred             EEEEEcCCChHHH-HHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           20 VALITGGATGIGE-STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGas~giG~-~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      ++-+.|- +|+|- ++|+.|.++|+.|...|+......+..+...  ..+ +...|..+              ....|.+
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~G--i~i-~~gh~~~~--------------i~~~d~v   64 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLG--IPI-FVPHSADN--------------WYDPDLV   64 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTT--CCE-ESSCCTTS--------------CCCCSEE
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCC--CeE-Eeeecccc--------------cCCCCEE
Confidence            3445544 44554 7899999999999999998755444434332  122 11222221              1378999


Q ss_pred             EECCCCCC
Q 023553           99 VNNAGISG  106 (280)
Q Consensus        99 i~~ag~~~  106 (280)
                      |+..++..
T Consensus        65 V~SsAI~~   72 (89)
T d1j6ua1          65 IKTPAVRD   72 (89)
T ss_dssp             EECTTCCT
T ss_pred             EEecCcCC
Confidence            99998853

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.05  E-value=0.88  Score=33.59  Aligned_cols=75  Identities=13%  Similarity=0.050  Sum_probs=52.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +++++||=.|++.|.   .+..|+++|++|++++-+++.++.+.+.....  ..+.+...|+.+..-           -+
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----------~~   94 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----------DG   94 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----------CC
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----------cc
Confidence            466789999997554   56688899999999999998777655444322  356777778765420           14


Q ss_pred             CccEEEECCCC
Q 023553           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~id~li~~ag~  104 (280)
                      ..|+++.+.-.
T Consensus        95 ~fD~I~~~~~~  105 (198)
T d2i6ga1          95 EYDFILSTVVM  105 (198)
T ss_dssp             CEEEEEEESCG
T ss_pred             cccEEEEeeee
Confidence            78998876643

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.02  E-value=4.2  Score=32.36  Aligned_cols=78  Identities=15%  Similarity=-0.014  Sum_probs=51.6

Q ss_pred             CCcEEEEEcCCC-hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC---CC-CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023553           17 VGRVALITGGAT-GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GE-PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGas~-giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++||=..+.+ +++.    .++..|++|+.++.+...++...+...   -. ..+.++..|+.      +.++....+
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            578888776654 4443    345679999999999887766654332   12 35777777653      335555455


Q ss_pred             hCCccEEEECCCC
Q 023553           92 FGTLDIMVNNAGI  104 (280)
Q Consensus        92 ~g~id~li~~ag~  104 (280)
                      -.+.|+||.+.-.
T Consensus       202 ~~~fD~IilDPP~  214 (309)
T d2igta1         202 GSTYDIILTDPPK  214 (309)
T ss_dssp             TCCBSEEEECCCS
T ss_pred             CCCCCEEEECCCc
Confidence            4689999998643

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.81  E-value=0.56  Score=32.58  Aligned_cols=37  Identities=16%  Similarity=0.171  Sum_probs=31.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      .+|+++|.| +|-+|.++|..|++.|.+|.++.+.+..
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecccc
Confidence            467888885 5799999999999999999999887654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=86.58  E-value=1.4  Score=31.23  Aligned_cols=80  Identities=6%  Similarity=0.037  Sum_probs=48.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC------C-CCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG------E-PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~------~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +-+.|- |-.|..+|++|.+.|+.+ ...|+.++..+..+....      . .....+...+.+.+.+......+.+...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            445555 889999999999999865 566776666655554321      0 1122233345567777777766655444


Q ss_pred             CccEEEECC
Q 023553           94 TLDIMVNNA  102 (280)
Q Consensus        94 ~id~li~~a  102 (280)
                      +-.++|...
T Consensus        81 ~~~~iid~s   89 (156)
T d2cvza2          81 EGTYWVDAT   89 (156)
T ss_dssp             TTEEEEECS
T ss_pred             ccccccccc
Confidence            445555544

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.35  E-value=0.53  Score=35.89  Aligned_cols=37  Identities=22%  Similarity=0.357  Sum_probs=31.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        16 l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      -.+|+++|.||+ --|...|..|+++|++|.++.++..
T Consensus        47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeeccc
Confidence            478899999875 4589999999999999999987653

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=86.27  E-value=0.57  Score=37.47  Aligned_cols=33  Identities=21%  Similarity=0.377  Sum_probs=24.9

Q ss_pred             cEEEEEcCCChHHH-----HHHHHHHHcCCeEEEEecCc
Q 023553           19 RVALITGGATGIGE-----STVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        19 k~vlItGas~giG~-----~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      |+++|++|++| |-     +|++.|.++|+.|..++...
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            67777766544 54     68999999999998876544

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=86.19  E-value=1.7  Score=31.71  Aligned_cols=74  Identities=18%  Similarity=0.100  Sum_probs=51.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC---CCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      +|.+||=.|+++|   .+...|++.+.+|+.++.+++.++...+.++   -..++.++.+|..          +......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccC
Confidence            6888888999877   3344566778899999999987776655543   2357888888742          1112235


Q ss_pred             CccEEEECCC
Q 023553           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~id~li~~ag  103 (280)
                      ..|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            8999988753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.13  E-value=1.8  Score=29.31  Aligned_cols=32  Identities=16%  Similarity=0.184  Sum_probs=26.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 023553           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        19 k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~   51 (280)
                      |.++|.| +|-||.++|..|.+.|++|.++.|+
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            4566665 4789999999999999999999875

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.66  E-value=1.6  Score=37.33  Aligned_cols=80  Identities=13%  Similarity=0.098  Sum_probs=50.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .|.||++.|.|+. ....++++.|.+.|..|+.++......+...+.......-..+ .|-.+..++.+++++.     +
T Consensus       342 ~l~Gkrv~i~~~~-~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~~~i-~~d~~~~el~~~i~~~-----~  414 (477)
T d1m1na_         342 RLEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLL-YDDVTGYEFEEFVKRI-----K  414 (477)
T ss_dssp             HHTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTTCEE-EESCBHHHHHHHHHHH-----C
T ss_pred             hhcCCcEEEecCc-hhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCCcEE-ecCCCHHHHHHHHHhc-----C
Confidence            4789999998764 5788899999999999888765543333332222221111122 2334566666666654     8


Q ss_pred             ccEEEEC
Q 023553           95 LDIMVNN  101 (280)
Q Consensus        95 id~li~~  101 (280)
                      +|+++-+
T Consensus       415 pDL~ig~  421 (477)
T d1m1na_         415 PDLIGSG  421 (477)
T ss_dssp             CSEEEEC
T ss_pred             CCEEEEC
Confidence            9999854

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=85.66  E-value=0.89  Score=33.80  Aligned_cols=80  Identities=13%  Similarity=0.136  Sum_probs=58.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHhCCccEE
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   98 (280)
                      ++=+|-|+||...++.+.+ . +.+|++++++++.++...+.++. ..++.++..+.++...+   +....  .+++|.+
T Consensus        27 ~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~~--~~~vdgI   99 (192)
T d1m6ya2          27 ILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTLG--IEKVDGI   99 (192)
T ss_dssp             EEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHTT--CSCEEEE
T ss_pred             EEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHcC--CCCccee
Confidence            3335777888888888877 3 57899999999998888777754 35789999988765433   22211  2589999


Q ss_pred             EECCCCCC
Q 023553           99 VNNAGISG  106 (280)
Q Consensus        99 i~~ag~~~  106 (280)
                      +...|+++
T Consensus       100 l~DlGvSs  107 (192)
T d1m6ya2         100 LMDLGVST  107 (192)
T ss_dssp             EEECSCCH
T ss_pred             eeccchhH
Confidence            99999853

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=85.54  E-value=2.5  Score=28.21  Aligned_cols=37  Identities=19%  Similarity=0.203  Sum_probs=28.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC---CeEEEEecCcch
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHG---AKVCIADVQDNL   54 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g---~~Vi~~~r~~~~   54 (280)
                      ..|.++|.|| |.+|.++|..|.+.|   .+|.++.+.+..
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~i   58 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMI   58 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchh
Confidence            3578888887 899999998777654   569888876543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=85.21  E-value=0.65  Score=35.58  Aligned_cols=36  Identities=14%  Similarity=0.226  Sum_probs=28.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      +.++|+|.|| |--|..+|..|+++|.+|+++.++.+
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            3567888876 45677888899999999999988654

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=84.77  E-value=2.9  Score=30.47  Aligned_cols=107  Identities=15%  Similarity=0.202  Sum_probs=52.9

Q ss_pred             cCCcEEEEEcCCCh-------------HHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHH
Q 023553           16 LVGRVALITGGATG-------------IGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVC   82 (280)
Q Consensus        16 l~~k~vlItGas~g-------------iG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   82 (280)
                      +++|+++|.|=|-.             -+..+++.|-..+.+|+-.+..-.........                     
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~---------------------   59 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND---------------------   59 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS---------------------
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh---------------------
Confidence            46899999988733             34455555544555555444333322211110                     


Q ss_pred             HHHHHHHHHhCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhhhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023553           83 SAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        83 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~isS~~  157 (280)
                      ..+..+.....+.|++|...|.-..  ......+.+.+...           ++.++..+++ .+..+++++...
T Consensus        60 ~~~~~~~~~~~~~D~vvi~~G~ND~--~~~~~~~~~~~~~~-----------l~~li~~~~~-~~~~~vl~~~~~  120 (208)
T d2o14a2          60 GQLEAILKYIKPGDYFMLQLGINDT--NPKHKESEAEFKEV-----------MRDMIRQVKA-KGADVILSTPQG  120 (208)
T ss_dssp             SHHHHHHTTCCTTCEEEEECCTGGG--CGGGCCCHHHHHHH-----------HHHHHHHHHT-TTCEEEEECCCC
T ss_pred             hhHHHHHHhcCCCCEEEEEcCCCcc--cccccccHHHHHHH-----------HHHHHHHHHh-cCCceeeccccc
Confidence            0122333334567999998886532  22223445544433           2223333322 346677776544

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.38  E-value=0.7  Score=35.59  Aligned_cols=36  Identities=17%  Similarity=0.191  Sum_probs=30.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEec
Q 023553           14 QRLVGRVALITGGATGIGESTVRLFHK-HGAKVCIADV   50 (280)
Q Consensus        14 ~~l~~k~vlItGas~giG~~ia~~l~~-~g~~Vi~~~r   50 (280)
                      .+++||+++|-| .|.+|+.+|+.|++ .|++|+.++-
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            468999999886 89999999999985 5999887763

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.76  E-value=0.59  Score=35.00  Aligned_cols=31  Identities=26%  Similarity=0.217  Sum_probs=26.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023553           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~   52 (280)
                      |+|.| +|--|..+|..|+++|.+|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            56666 67779999999999999999998875

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=83.16  E-value=2.4  Score=28.76  Aligned_cols=77  Identities=12%  Similarity=0.110  Sum_probs=50.1

Q ss_pred             CCcEEEEEcCCC----------hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHH
Q 023553           17 VGRVALITGGAT----------GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        17 ~~k~vlItGas~----------giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ..|++||.|++.          --+...++.|.++|+.++++..+++...-.-   ....++++   +--..+.+.++++
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~---d~aD~lYf---eplt~e~v~~Ii~   76 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY---DTSDRLYF---EPVTLEDVLEIVR   76 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST---TSSSEEEC---CCCSHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh---hhcCceEE---ccCCHHHHHHHHH
Confidence            357899998853          3456788999999999999999887643211   11123333   2234666655555


Q ss_pred             HHHHHhCCccEEEECCCC
Q 023553           87 LTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        87 ~~~~~~g~id~li~~ag~  104 (280)
                      .     .++|.++...|.
T Consensus        77 ~-----E~p~~ii~~~GG   89 (121)
T d1a9xa4          77 I-----EKPKGVIVQYGG   89 (121)
T ss_dssp             H-----HCCSEEECSSST
T ss_pred             H-----hCCCEEEeehhh
Confidence            3     288998887764

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=83.11  E-value=3.8  Score=28.66  Aligned_cols=75  Identities=12%  Similarity=0.149  Sum_probs=49.7

Q ss_pred             ccCCcEEEEEcCCCh-HHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhC---CCCCeEEEecCCCCHHHHHHHHHHHH
Q 023553           15 RLVGRVALITGGATG-IGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        15 ~l~~k~vlItGas~g-iG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +++|+++|=.|+++| +|.+    .+.+|+ +|+.++.+++..+...+.+.   ...++.+++.|..+      .++   
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---
Confidence            468999988877655 5553    456776 69999999887665554443   23468888887432      122   


Q ss_pred             HHhCCccEEEECC
Q 023553           90 EKFGTLDIMVNNA  102 (280)
Q Consensus        90 ~~~g~id~li~~a  102 (280)
                      ...++.|+++.++
T Consensus        79 ~~~~~fDiIf~DP   91 (152)
T d2esra1          79 CLTGRFDLVFLDP   91 (152)
T ss_dssp             HBCSCEEEEEECC
T ss_pred             ccccccceeEech
Confidence            2235899998865

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=83.00  E-value=2  Score=33.71  Aligned_cols=77  Identities=19%  Similarity=0.217  Sum_probs=50.0

Q ss_pred             CcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh---CCCCCeEEEecCCCCHHHHHHHHHHHHHHhC
Q 023553           18 GRVALITGGATG-IGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        18 ~k~vlItGas~g-iG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   93 (280)
                      .++++-.|+++| |+.+++ .  ...++|++++.+++.++-+.+-.   +-..++.+...|+.+.         ..+..+
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~  178 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFA  178 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTT
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccC
Confidence            445665666555 555444 2  35778999999998776655443   2234666778887644         223347


Q ss_pred             CccEEEECCCCCC
Q 023553           94 TLDIMVNNAGISG  106 (280)
Q Consensus        94 ~id~li~~ag~~~  106 (280)
                      ++|++|.|.-...
T Consensus       179 ~fDlIVsNPPYI~  191 (271)
T d1nv8a_         179 SIEMILSNPPYVK  191 (271)
T ss_dssp             TCCEEEECCCCBC
T ss_pred             cccEEEEcccccC
Confidence            9999999987653

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.96  E-value=0.94  Score=34.97  Aligned_cols=36  Identities=22%  Similarity=0.306  Sum_probs=30.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecC
Q 023553           15 RLVGRVALITGGATGIGESTVRLFHK-HGAKVCIADVQ   51 (280)
Q Consensus        15 ~l~~k~vlItGas~giG~~ia~~l~~-~g~~Vi~~~r~   51 (280)
                      +++||+++|-|- |..|..+|+.|++ .|++|+.++-.
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            489999999987 5699999999986 49998877543

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=82.92  E-value=1.3  Score=33.20  Aligned_cols=75  Identities=12%  Similarity=0.092  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh--CCCCCeEEEecCCCCHHHHHHHHHHHHHHhCC
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL--GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   94 (280)
                      .+++||=.|++.|.-   +..|+++|++|++++-+++.++.+.+..  ....++.++.+|..+..     +     ..+.
T Consensus        15 ~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-----~-----~~~~   81 (231)
T d1vl5a_          15 GNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----F-----TDER   81 (231)
T ss_dssp             SCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----S-----CTTC
T ss_pred             CcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-----c-----cccc
Confidence            468999999988854   4567888999999999987766554443  22357888888877532     0     0147


Q ss_pred             ccEEEECCCC
Q 023553           95 LDIMVNNAGI  104 (280)
Q Consensus        95 id~li~~ag~  104 (280)
                      .|+++++...
T Consensus        82 fD~v~~~~~l   91 (231)
T d1vl5a_          82 FHIVTCRIAA   91 (231)
T ss_dssp             EEEEEEESCG
T ss_pred             cccccccccc
Confidence            9999888654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=82.90  E-value=1.7  Score=30.88  Aligned_cols=46  Identities=17%  Similarity=0.204  Sum_probs=34.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc--CCeEEEE--ecCcchHHHHHHHhC
Q 023553           18 GRVALITGGATGIGESTVRLFHKH--GAKVCIA--DVQDNLGQQVCQSLG   63 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~--g~~Vi~~--~r~~~~~~~~~~~~~   63 (280)
                      .|++.|.|+||.||.....-+.++  ..+|++.  .++-+.+.+.+++.+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~   51 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTN   51 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhc
Confidence            489999999999999999988875  4666654  344555666555554

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=82.87  E-value=0.68  Score=37.23  Aligned_cols=37  Identities=27%  Similarity=0.373  Sum_probs=30.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      +.|+++|.||+ --|..+|..|+++|++|.++.++...
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~~i   37 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRDHI   37 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCCCC
Confidence            46888888875 46788889999999999999877653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=82.83  E-value=0.62  Score=31.72  Aligned_cols=35  Identities=20%  Similarity=0.134  Sum_probs=29.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      +|.++|.| +|.+|.++|..|++.|++|.++.+.+.
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            46777765 478999999999999999999988754

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.60  E-value=0.54  Score=35.57  Aligned_cols=34  Identities=29%  Similarity=0.438  Sum_probs=29.5

Q ss_pred             CcEEEEEcCCChHHH-----HHHHHHHHcCCeEEEEecC
Q 023553           18 GRVALITGGATGIGE-----STVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        18 ~k~vlItGas~giG~-----~ia~~l~~~g~~Vi~~~r~   51 (280)
                      +|++.|+|+-||.|+     .+|..|++.|.+|++++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            789999999998887     4688889999999999855

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.54  E-value=0.63  Score=36.43  Aligned_cols=33  Identities=27%  Similarity=0.278  Sum_probs=29.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023553           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        20 ~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   53 (280)
                      .|+|.||+ --|..+|..|+++|.+|+++.++++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            47888877 8899999999999999999998764

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=82.50  E-value=0.31  Score=35.62  Aligned_cols=76  Identities=18%  Similarity=0.310  Sum_probs=40.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc-----CCeEEEEecCcchHHHHHHHhC---C--CCCeEEEecCCCCHHHHHHHHHH
Q 023553           18 GRVALITGGATGIGESTVRLFHKH-----GAKVCIADVQDNLGQQVCQSLG---G--EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~-----g~~Vi~~~r~~~~~~~~~~~~~---~--~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .-++.|.||++.-...++..+...     +..+++.+.++++++.....++   .  .........  +|..+       
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~e-------   73 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDPEE-------   73 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCHHH-------
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CChhh-------
Confidence            345666677654333344444432     2479999999887663332221   1  122222221  23322       


Q ss_pred             HHHHhCCccEEEECCCCC
Q 023553           88 TVEKFGTLDIMVNNAGIS  105 (280)
Q Consensus        88 ~~~~~g~id~li~~ag~~  105 (280)
                         ....-|++|+.+|..
T Consensus        74 ---al~~AD~Vvitag~~   88 (167)
T d1u8xx1          74 ---AFTDVDFVMAHIRVG   88 (167)
T ss_dssp             ---HHSSCSEEEECCCTT
T ss_pred             ---ccCCCCEEEECCCcC
Confidence               124899999999975

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=82.26  E-value=1.2  Score=33.95  Aligned_cols=78  Identities=14%  Similarity=0.159  Sum_probs=56.0

Q ss_pred             CCcEEEEEcCCChHH-HHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHhCCc
Q 023553           17 VGRVALITGGATGIG-ESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGas~giG-~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   95 (280)
                      +|.+||=.|+++|-= ..+++ ..-.+-.|++++.++..++.+.+.......+..+..|..+++....       ....+
T Consensus        73 pG~~VLDlGaGsG~~t~~la~-~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~-------~~~~v  144 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSD-IVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRA-------LVPKV  144 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHH-HHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTT-------TCCCE
T ss_pred             CCCEEEEeccCCCHHHHHHHH-HhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccc-------cccce
Confidence            688999999986653 34443 3333458999999999988888877766778888899887764321       12478


Q ss_pred             cEEEECC
Q 023553           96 DIMVNNA  102 (280)
Q Consensus        96 d~li~~a  102 (280)
                      |++++..
T Consensus       145 D~i~~d~  151 (227)
T d1g8aa_         145 DVIFEDV  151 (227)
T ss_dssp             EEEEECC
T ss_pred             EEEEEEc
Confidence            8887754

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=81.22  E-value=0.92  Score=30.39  Aligned_cols=36  Identities=19%  Similarity=0.350  Sum_probs=29.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        18 ~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      .|+++|.| +|.+|.++|..|++.|++|.++.+.+..
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeeccc
Confidence            46666664 5799999999999999999999887653

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=80.91  E-value=2.9  Score=28.14  Aligned_cols=37  Identities=14%  Similarity=0.342  Sum_probs=31.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023553           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        17 ~~k~vlItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   54 (280)
                      ..|.++|.|| |-||.++|..|++.|.+|.++.|++..
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            4467777765 789999999999999999999988764

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=80.75  E-value=3  Score=28.83  Aligned_cols=83  Identities=10%  Similarity=0.041  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCC---ChHHHHHHHHHHHcCCeEEEEecCcch--HH-----HHHHHhCCCCCeEEEecCCCCHHHHHHHHH
Q 023553           17 VGRVALITGGA---TGIGESTVRLFHKHGAKVCIADVQDNL--GQ-----QVCQSLGGEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        17 ~~k~vlItGas---~giG~~ia~~l~~~g~~Vi~~~r~~~~--~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      +-|.+.|.|+|   +..|..+.+.|.+.|+.++.+--+...  ..     .....+....+...+   ...++.+..+++
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v---~~p~~~v~~~v~   88 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDV---FRPPSALMDHLP   88 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEE---CSCHHHHTTTHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEE---eccHHHHHHHHH
Confidence            67899999998   579999999999999998887554321  00     011222222343333   345777888888


Q ss_pred             HHHHHhCCccEEEECCCC
Q 023553           87 LTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        87 ~~~~~~g~id~li~~ag~  104 (280)
                      ++.+.  ++..++...|.
T Consensus        89 ~~~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          89 EVLAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHHHH--CCSCEEECTTC
T ss_pred             HHHhh--CCCeEEEecCc
Confidence            88766  56677777764

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=80.20  E-value=0.92  Score=35.71  Aligned_cols=31  Identities=16%  Similarity=0.245  Sum_probs=25.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc
Q 023553           21 ALITGGATGIGESTVRLFHKHGA-KVCIADVQD   52 (280)
Q Consensus        21 vlItGas~giG~~ia~~l~~~g~-~Vi~~~r~~   52 (280)
                      |+|.|| |-+|.++|.+|+++|. +|++++++.
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            666665 4899999999999996 599998864